BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008267
         (572 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255579847|ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
 gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
          Length = 577

 Score =  929 bits (2402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/571 (79%), Positives = 488/571 (85%), Gaps = 31/571 (5%)

Query: 22  PCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           PCPHLA+FH+RNG+KPFR +QDCL IKPPGGRAAIRR+ SEVPRCG CG+SS PRLYAC+
Sbjct: 12  PCPHLAEFHSRNGSKPFRFLQDCLRIKPPGGRAAIRREPSEVPRCGACGESSRPRLYACV 71

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 141
            CA +SCH PP  SH A HAT       HEIAVDVDRAELFCCACRDQVYDRDFDAAVVL
Sbjct: 72  TCATISCHAPPGPSHAAAHATSPG----HEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 127

Query: 142 AHTTSI------IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
           + TTS       I SSKPENLRKRRR+DYRPW PD+R+R LM + +SP++  S    ++P
Sbjct: 128 SQTTSFKAAGNAILSSKPENLRKRRRVDYRPWRPDVRDRMLMESGSSPLEYSS----EMP 183

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS-KNGV----------- 243
           RGLRGLNNLGNTCFMNSVLQAL HTPPLRNYFLSDRHNRYYCQ  KNGV           
Sbjct: 184 RGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQMKNGVNNGAFNNNSNN 243

Query: 244 ---RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
              +LCLACDLD MFSA+F GDRMPYSPAKFLYSWW+HASNLASYEQQDAHEFFISMLDG
Sbjct: 244 KNAKLCLACDLDAMFSAVFSGDRMPYSPAKFLYSWWQHASNLASYEQQDAHEFFISMLDG 303

Query: 301 IHEK--VEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
           IHEK  VEKD  KP SQG+GDCCIAHR+FSGILRSDVMCMACGFTSTT+DPCVD SLDLE
Sbjct: 304 IHEKIKVEKDLCKPHSQGHGDCCIAHRIFSGILRSDVMCMACGFTSTTYDPCVDISLDLE 363

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
           P QG   K +S K++HSCN E D M +SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC
Sbjct: 364 PQQGGFGKHASMKAHHSCNGETDCMGASQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 423

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
           QVRQESLKQMSIRKLPLV CFHIKRFEHSS+RKMSRKVDRYLQFP SLDM PYLSSSILR
Sbjct: 424 QVRQESLKQMSIRKLPLVYCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMTPYLSSSILR 483

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWI 538
           +RFGNR FPFDGDE +  NE SSEFELFAVVTHTGKLDAGHYVTYLRL+N+WYKCDDAWI
Sbjct: 484 NRFGNRIFPFDGDEPDASNEMSSEFELFAVVTHTGKLDAGHYVTYLRLNNQWYKCDDAWI 543

Query: 539 TEVNENTVRAAQGYMMFYVQKMLYYKASEKQ 569
           T+VNEN VRAAQGYM+FYVQK+LYYKASE Q
Sbjct: 544 TQVNENIVRAAQGYMIFYVQKVLYYKASENQ 574


>gi|449443277|ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
 gi|449518463|ref|XP_004166261.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 602

 Score =  924 bits (2387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/602 (75%), Positives = 496/602 (82%), Gaps = 38/602 (6%)

Query: 6   NHHHQNDKTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPR 65
           N HH N     QIFP  CPHLADF +RNG+K FR +QDCL +KPPGGRAAIRRD +EVPR
Sbjct: 4   NFHHPNLPFTSQIFPPSCPHLADFRSRNGSKSFRLLQDCLRVKPPGGRAAIRRDPNEVPR 63

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C  CGDS+ PRLYAC+ CAAVSCH PP  SH A HA    +   HEIAVDVDRAELFCCA
Sbjct: 64  CSSCGDSARPRLYACVTCAAVSCHAPPSHSHAAAHAESMPTG--HEIAVDVDRAELFCCA 121

Query: 126 CRDQVYDRDFDAAVVLAHTTS------IIQSS---------KPENLRKRRRIDYRPWSPD 170
           CRDQVYDRDFDAAVVLA TT+       + SS          PENLRKRRR+DY+PW PD
Sbjct: 122 CRDQVYDRDFDAAVVLAQTTASTLGGNAVSSSGVSPSQPSLPPENLRKRRRVDYQPWMPD 181

Query: 171 LRERSLMVNNASPIDSMSSSNG---DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF 227
           LRER L+  N+SP+D ++S+ G   +LP GLRGLNNLGNTCFMNSVLQAL HTPPLRN+F
Sbjct: 182 LRERVLVGANSSPLDCVNSNLGSESELPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNFF 241

Query: 228 LSDRHNRYYCQ-----------------SKNGVRLCLACDLDTMFSAIFCGDRMPYSPAK 270
           LSDRHNRY+CQ                 SKN  R+CLACDLD MFSA+F GDR PYSPAK
Sbjct: 242 LSDRHNRYFCQRNVNGSNVSSNVNDGNGSKNS-RICLACDLDAMFSAVFSGDRTPYSPAK 300

Query: 271 FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGI 330
           FL+SWW+HA+NLASYEQQDAHEFFIS+L+GIHEKV+KD+ KP SQGNGDCCIAHRVFSGI
Sbjct: 301 FLFSWWQHAANLASYEQQDAHEFFISILEGIHEKVDKDRRKPYSQGNGDCCIAHRVFSGI 360

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
           LRSDVMCMACGFTSTT+DPCVD SLDLEPN G S K ++ +SN  CN EAD MNSSQN  
Sbjct: 361 LRSDVMCMACGFTSTTYDPCVDISLDLEPNLGGSAKMAAARSNLPCNGEADCMNSSQNQR 420

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
           +S+L+GCLD+FTRPE+LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR
Sbjct: 421 LSSLVGCLDQFTRPEKLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 480

Query: 451 KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVT 510
           KMSRKVDRYLQFP SLDMAPYLSSSILRSRFGNR FPFDGDE +  NE SSEFELFAV+T
Sbjct: 481 KMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDELDGCNEMSSEFELFAVIT 540

Query: 511 HTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEKQG 570
           H GKLDAGHYVTYLRLSN+WYKCDDAWIT+VNEN VRAAQGYMMFYVQKMLYYKASEKQ 
Sbjct: 541 HKGKLDAGHYVTYLRLSNQWYKCDDAWITQVNENIVRAAQGYMMFYVQKMLYYKASEKQS 600

Query: 571 TS 572
            S
Sbjct: 601 AS 602


>gi|359484748|ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 587

 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/577 (77%), Positives = 480/577 (83%), Gaps = 31/577 (5%)

Query: 22  PCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           PCPHLA++  RNG+KPFRA+Q+CL +KP G RAAIRRD SEVPRCG CG+++  RLYAC+
Sbjct: 8   PCPHLAEYRTRNGSKPFRALQECLRVKPLG-RAAIRRDPSEVPRCGACGEAARSRLYACV 66

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 141
            CAAVSCH     S     A   S    HEIAVDVDRAELFCCACRDQVYDRDFDAAVV+
Sbjct: 67  TCAAVSCHSSDSPSPSHAAAHAVSMPPGHEIAVDVDRAELFCCACRDQVYDRDFDAAVVV 126

Query: 142 AHTT-------SIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNG-- 192
           A TT       SI  S  PENLRKRRR+DYRPW+PDLRER LM  N+SP+     ++G  
Sbjct: 127 AQTTASTLGGGSIRSSPPPENLRKRRRVDYRPWTPDLRERVLMTRNSSPLQRTEGADGAN 186

Query: 193 --DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG-------- 242
             +LP GLRGLNNLGNTCFMNSVLQAL HTPPLRNYFLSDRHNRYYCQ KN         
Sbjct: 187 LSNLPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKNNASNASKRN 246

Query: 243 -----------VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAH 291
                      +RLCLACD+D MFSA+F GDR PYSPAKFLYSWW+HA+NLASYEQQDAH
Sbjct: 247 AASNDSNSNKNLRLCLACDMDAMFSAVFSGDRTPYSPAKFLYSWWQHAANLASYEQQDAH 306

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
           EFFISMLDGIHEK+ KD+ K +SQGNG+CCIAHRVFSGILRSDVMCMACGFTSTT+DPCV
Sbjct: 307 EFFISMLDGIHEKMGKDKRKTQSQGNGECCIAHRVFSGILRSDVMCMACGFTSTTYDPCV 366

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLDLEPNQG S K  STKS+HSCN EAD MNSSQNCG STLMGCLDRFTRPERLGSDQ
Sbjct: 367 DISLDLEPNQGVSTKMGSTKSHHSCNGEADSMNSSQNCGTSTLMGCLDRFTRPERLGSDQ 426

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPY 471
           KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS+R MSRKVDRYLQFP SLDMAPY
Sbjct: 427 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSIRNMSRKVDRYLQFPFSLDMAPY 486

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWY 531
           LSSSILRSRFGNR F FDGDE +  NE SSEFELFAVVTHTGKLDAGHYVTYLRLSN+WY
Sbjct: 487 LSSSILRSRFGNRIFSFDGDEPDASNELSSEFELFAVVTHTGKLDAGHYVTYLRLSNQWY 546

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEK 568
           KCDDAWIT+VNEN VRAAQGYMMFYVQKMLYYKASEK
Sbjct: 547 KCDDAWITQVNENIVRAAQGYMMFYVQKMLYYKASEK 583


>gi|224142545|ref|XP_002324616.1| predicted protein [Populus trichocarpa]
 gi|222866050|gb|EEF03181.1| predicted protein [Populus trichocarpa]
          Length = 566

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/559 (76%), Positives = 472/559 (84%), Gaps = 20/559 (3%)

Query: 19  FPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
            P PCPHLADF +RNGTKPF  +Q+CL IKPP GRA+IRRD SE+PRCG C  SS PR+Y
Sbjct: 17  IPPPCPHLADFRSRNGTKPFHLLQNCLRIKPPHGRASIRRDPSEIPRCGACAVSSVPRIY 76

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           AC+ CA +SCH PP  SH A HA   +    HEI+VDVDRAELFCCACRD VYDRDFDAA
Sbjct: 77  ACVTCATISCHAPPEPSHAAAHAASMAPG--HEISVDVDRAELFCCACRDYVYDRDFDAA 134

Query: 139 VVLAHTTSIIQSS-KPENLRKRRRI-DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR 196
           VVL+   + I S+   +NLRK+RRI +YRPW PD++ER L+ NN+S ++ +     D P 
Sbjct: 135 VVLSSKANNIHSNVNSDNLRKKRRIVEYRPWLPDIQERVLVNNNSSVLNFVE----DRPW 190

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK------NGVRLCLACD 250
           GLRGLNNLGNTCFMNSVLQAL HTPPLRNYFLSDRHNRYYCQ K       G+RLCLACD
Sbjct: 191 GLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKKSGNENGGLRLCLACD 250

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
           +D MFSA+F G+ +PYSPAKFLYSWW+HA+NLASYEQQDAHEFFISMLDGIHEKVEKD+H
Sbjct: 251 MDAMFSAVFSGNPVPYSPAKFLYSWWQHAANLASYEQQDAHEFFISMLDGIHEKVEKDRH 310

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
           K       DCCIAHRVFSGILRSDVMC ACGFTST +DPCVD SLDLEP  GSS K+ S 
Sbjct: 311 K-----THDCCIAHRVFSGILRSDVMCTACGFTSTKYDPCVDISLDLEPYLGSSAKSMSL 365

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
           K+ HSCN EAD  NSSQN GISTL+GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI
Sbjct: 366 KT-HSCNGEADCTNSSQNGGISTLIGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 424

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
           RKLPLVSCFHIKRFEHSS+RKMSRKVDRYLQFP SLDMAPYLSSSILRSRFGNR FPFDG
Sbjct: 425 RKLPLVSCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDG 484

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ 550
           DE++  NE SSEFELFAVVTHTGKLD+GHYVTYLRLSN+WYKCDD+WIT+VNEN VRAAQ
Sbjct: 485 DEADASNEMSSEFELFAVVTHTGKLDSGHYVTYLRLSNQWYKCDDSWITQVNENIVRAAQ 544

Query: 551 GYMMFYVQKMLYYKASEKQ 569
           GYMMFYVQKMLYYKA EKQ
Sbjct: 545 GYMMFYVQKMLYYKAGEKQ 563


>gi|356562949|ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 592

 Score =  864 bits (2233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/590 (71%), Positives = 474/590 (80%), Gaps = 31/590 (5%)

Query: 13  KTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDS 72
           K NGQI PQPCPHLA+F  R   KPF A+ +CL IKPPGGRAA+RRD  EVPRC  CG S
Sbjct: 4   KINGQISPQPCPHLAEFR-RTSAKPFLALHNCLRIKPPGGRAALRRDPDEVPRCCSCGLS 62

Query: 73  SCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYD 132
           +  RLYAC+ CAA+ CH           A   S    H+IAVDVDRAELFCCAC DQVYD
Sbjct: 63  APSRLYACVTCAAIFCHSSTGVGLSHAAAHAASMPPGHQIAVDVDRAELFCCACHDQVYD 122

Query: 133 RDFDAAVVLAHTTS---------IIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
           RDFDAAVV+A T +          I S +PENLRK+RR+DYRPW+PDLRER+L+ + + P
Sbjct: 123 RDFDAAVVIAQTAASTLGGDPPPPIPSPQPENLRKKRRVDYRPWAPDLRERALIGSCSVP 182

Query: 184 I---DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
           I    +++  + DLPRGLRGLNNLGNTCFMNSVLQAL HTPPLRNYFLSDRHNRY+CQ K
Sbjct: 183 IAGAGTVADLSPDLPRGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYFCQKK 242

Query: 241 NG------------------VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNL 282
           N                    R CLACD+D MFS++F GDR PYSPAKFLYSWW+HA+NL
Sbjct: 243 NNGDVDGALKRSGGNNGNKNARTCLACDMDAMFSSVFSGDRAPYSPAKFLYSWWQHAANL 302

Query: 283 ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGF 342
           A+YEQQDAHEFFISMLDGIHEKVEK + KP S+GNGDCCIAH+VFSGILRSDV CMACGF
Sbjct: 303 ATYEQQDAHEFFISMLDGIHEKVEKVRCKPHSEGNGDCCIAHKVFSGILRSDVTCMACGF 362

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
           TSTT+DPC+D SLDLEPNQG S K ++  SNHSCN E D MNSSQNCG STLMGCL RFT
Sbjct: 363 TSTTYDPCIDISLDLEPNQGGSTKITTASSNHSCNGEPDCMNSSQNCGTSTLMGCLKRFT 422

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           R ERLGSDQKFFC+QCQVRQE+LKQMSIRKLPLVSCFHIKRFEHSS RKMSRKVDRYLQF
Sbjct: 423 RAERLGSDQKFFCRQCQVRQETLKQMSIRKLPLVSCFHIKRFEHSSTRKMSRKVDRYLQF 482

Query: 463 PLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVT 522
           P SLDM+PYLSS+ILR+RFGNR FPFDGDE +  +E  SEFELFAVVTH+GKLDAGHYVT
Sbjct: 483 PFSLDMSPYLSSTILRNRFGNRIFPFDGDEPDASDELCSEFELFAVVTHSGKLDAGHYVT 542

Query: 523 YLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEKQGTS 572
           YLRLSN+WYKCDDAW+T+V+EN VRAAQ YMMFYVQKMLYYKA++KQ  S
Sbjct: 543 YLRLSNQWYKCDDAWVTQVDENIVRAAQCYMMFYVQKMLYYKATDKQVAS 592


>gi|356548528|ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 594

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/592 (70%), Positives = 470/592 (79%), Gaps = 33/592 (5%)

Query: 13  KTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDS 72
           K NGQI P PCPHLA+FH R   KPF A+ +CL IKPPGGRA++RR+  EVPRC  CG S
Sbjct: 4   KINGQISPLPCPHLAEFH-RTSAKPFLALHNCLRIKPPGGRASLRRNPDEVPRCCACGLS 62

Query: 73  SCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYD 132
           +  RLYAC+ CAAVSCH           A   S    H+IAVDVDRAELFCCACRDQVYD
Sbjct: 63  APSRLYACVTCAAVSCHSSAAGVLSHAAAHAASMPPGHQIAVDVDRAELFCCACRDQVYD 122

Query: 133 RDFDAAVVLAHTTS---------IIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
           RDFDAAVV+A T +          I S +PENLRK+RR+DY PW+PDLRER+L+ + + P
Sbjct: 123 RDFDAAVVIAQTAASTLGGDPPPPIPSPQPENLRKKRRVDYWPWAPDLRERALIGSFSGP 182

Query: 184 I---DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
           I   +++   +  LPRGLRGLNNLGNTCFMNSVLQAL HTPPLRNYFLSDRHNR++CQ K
Sbjct: 183 IAGAETVVDHSPGLPRGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRFFCQKK 242

Query: 241 NG--------------------VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHAS 280
           N                      R+CLACD+D  FSA+F GDR PYSPAKFLYSWW+HA+
Sbjct: 243 NNGDVDVDAAVKRSGGNNGNKNARICLACDMDATFSAVFSGDRAPYSPAKFLYSWWQHAA 302

Query: 281 NLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC 340
           NLA+YEQQDAHEFFISMLDGIHEKVEK + KP ++GNGDCCIAH+VFSGILRSDV CMAC
Sbjct: 303 NLATYEQQDAHEFFISMLDGIHEKVEKGRRKPHTEGNGDCCIAHKVFSGILRSDVTCMAC 362

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
           GFTSTT+DPC+D SLDLEPNQ  S K ++  SNHSCN EAD MNSSQ CG STLMGCL R
Sbjct: 363 GFTSTTYDPCIDISLDLEPNQWGSTKMATATSNHSCNGEADCMNSSQICGTSTLMGCLKR 422

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
           FTR ERLGSDQK FC+QCQVRQE+LKQMSIRKLPLVSCFHIKRFEHSS RKM RKVDRYL
Sbjct: 423 FTRAERLGSDQKIFCRQCQVRQETLKQMSIRKLPLVSCFHIKRFEHSSTRKMPRKVDRYL 482

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHY 520
           QFP SLDM+PYLSS+ILR+RFGNR FPFDGDE +  +E  SEFELFAVVTH+GKLDAGHY
Sbjct: 483 QFPFSLDMSPYLSSTILRNRFGNRIFPFDGDELDASDELCSEFELFAVVTHSGKLDAGHY 542

Query: 521 VTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEKQGTS 572
           VTYLRLSN+WYKCDDAW+T+V+EN VRAAQ YMMFYVQKMLYYKA++K   S
Sbjct: 543 VTYLRLSNRWYKCDDAWVTQVDENIVRAAQCYMMFYVQKMLYYKATDKHVAS 594


>gi|414585137|tpg|DAA35708.1| TPA: hypothetical protein ZEAMMB73_275507 [Zea mays]
          Length = 563

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/574 (60%), Positives = 418/574 (72%), Gaps = 40/574 (6%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSS---CPR 76
           P PCPHLA    R  ++P R ++ CL ++P  GR  IRRD  E+PRC  C  +S     R
Sbjct: 7   PPPCPHLAAH--RLSSRPLRFLRRCLRVRP-LGRPEIRRDPRELPRCSPCSAASPSPTSR 63

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           LYAC++CAAV C         A      S+   H+IAVDVDRAELFC AC DQVYD DFD
Sbjct: 64  LYACLSCAAVFC------PSHAATHASASAGPGHQIAVDVDRAELFCAACGDQVYDPDFD 117

Query: 137 AAVVLAHTTSIIQSSKPEN--------LRKRRRIDYRPWSPDLRERSLMVNNASPIDSMS 188
            AV LA ++S++ S+   +        LRKRRR+DYR W+PD  E +LM +     D  +
Sbjct: 118 HAVFLAQSSSLLPSTSTSSASASASPALRKRRRVDYRAWAPDPAEFALMTS----ADPTT 173

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR---- 244
           S++   P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNR+ C  +  VR    
Sbjct: 174 SASASAPAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRAS 233

Query: 245 -----LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
                 CLACDLD ++SA F GDR PYSPAKFLYSWW+HASNLASYEQQDAHEFFIS+LD
Sbjct: 234 DADRVACLACDLDEIYSAAFSGDRTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILD 293

Query: 300 GIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
            IHE ++ DQ K  +QG+GDCCIAHRVFSGILRSDV C +CGFTSTTF+PC+D SLD++ 
Sbjct: 294 HIHENIKDDQQKSYAQGHGDCCIAHRVFSGILRSDVTCTSCGFTSTTFEPCMDISLDMDA 353

Query: 360 NQGSSMKTSSTKSNHSCNCEAD--GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
              SS   ++TKS H  N E    G+NS     + TLM CL+RFTR ERL ++QKFFC+ 
Sbjct: 354 GDNSSFGVANTKS-HVRNGERGLAGVNSK----VLTLMRCLERFTRSERLDAEQKFFCEH 408

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           C  RQESLKQMSIR+LPLVSCFHIKRFEHSSV+K+SRKVD  LQFP SLDMAPYLSSSIL
Sbjct: 409 CNERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKVSRKVDHCLQFPFSLDMAPYLSSSIL 468

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAW 537
           RSR+GNR FP +  +++ ++E SSEFE+FAV+TH+GKL+AGHYVTYLRL+N WYKCDDAW
Sbjct: 469 RSRYGNRIFPAEASDADAVSEVSSEFEIFAVITHSGKLEAGHYVTYLRLNNHWYKCDDAW 528

Query: 538 ITEVNENTVRAAQGYMMFYVQKMLYYKASEKQGT 571
           +T V E+TVR +Q YM+FYVQK  YYKA E+  T
Sbjct: 529 VTRVEEHTVRTSQAYMLFYVQKTFYYKACERAAT 562


>gi|242077396|ref|XP_002448634.1| hypothetical protein SORBIDRAFT_06g030580 [Sorghum bicolor]
 gi|241939817|gb|EES12962.1| hypothetical protein SORBIDRAFT_06g030580 [Sorghum bicolor]
          Length = 565

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/576 (61%), Positives = 420/576 (72%), Gaps = 42/576 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCG---DSSCPR 76
           P PCPHLA    R  ++P R ++ CL ++P  GR  IRRD  E+PRC  C     S   R
Sbjct: 7   PPPCPHLAAH--RLSSRPLRFLRRCLRVRP-LGRPEIRRDPRELPRCSPCAAAAPSPTSR 63

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           LYAC++CAAV C         A      S+   H+IAVDVDRAELFC AC DQVYD DFD
Sbjct: 64  LYACLSCAAVFC------PSHAASHASASAGPGHQIAVDVDRAELFCAACGDQVYDPDFD 117

Query: 137 AAVVLAHTTSIIQSSKPEN------LRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
            AV LA ++S++ S+   +      LRKRRR+DYR W+PD  E +LM    S  D  +S+
Sbjct: 118 HAVFLAQSSSLLPSTSASSPSPSAALRKRRRVDYRAWAPDPAEFALM----SSADPTTSA 173

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR------ 244
           +   P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNR+ C  +  VR      
Sbjct: 174 SAAAPAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRATDA 233

Query: 245 -----LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
                 CLACDLD ++SA F G+RMPYSPAKFLYSWW+HASNLASYEQQDAHEFFIS+LD
Sbjct: 234 DAARVACLACDLDEIYSAAFSGERMPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILD 293

Query: 300 GIHEKVEKDQHK--PRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
            IHE ++ DQ K   ++QG+GDCCIAHRVFSGILRSDV C +CGFTSTTF+PC+D SLD+
Sbjct: 294 HIHENIKDDQQKSHAQAQGHGDCCIAHRVFSGILRSDVTCTSCGFTSTTFEPCMDISLDM 353

Query: 358 EPNQGSSMKTSSTKSNHSCNCEAD--GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
           +    SS   ++TK  H  N E    GMNS     +STLM CL+RFTR ERL ++QKFFC
Sbjct: 354 DAGDNSSFGVANTKP-HVRNGERGLAGMNSK----VSTLMRCLERFTRSERLDAEQKFFC 408

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
           + C  RQESLKQMSIR+LPLVSCFHIKRFEHSSV+K+SRKVD  LQFP SLDMAPYLSSS
Sbjct: 409 EHCNERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKVSRKVDHCLQFPFSLDMAPYLSSS 468

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDD 535
           ILRSR+GNR FP +  +++ ++E SSEFE+FAV+TH+GKL+AGHYVTYLRL+N WYKCDD
Sbjct: 469 ILRSRYGNRIFPAEASDADAVSEMSSEFEIFAVITHSGKLEAGHYVTYLRLNNHWYKCDD 528

Query: 536 AWITEVNENTVRAAQGYMMFYVQKMLYYKASEKQGT 571
           AW+T V E+TVR +Q YM+FYVQK LYYKA E+  T
Sbjct: 529 AWVTRVEEHTVRTSQAYMLFYVQKTLYYKACERAAT 564


>gi|357162360|ref|XP_003579384.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
           [Brachypodium distachyon]
          Length = 563

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/571 (60%), Positives = 421/571 (73%), Gaps = 34/571 (5%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCP---- 75
           P PCPHLA    R  ++P R ++ CL ++P  GR  IRRD+ EVPRC  C  S+ P    
Sbjct: 7   PPPCPHLAAH--RLTSRPLRFLRRCLRVRP-LGRPEIRRDAREVPRCSPCASSTSPSPSP 63

Query: 76  -RLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRD 134
            RLYAC++CAAV C      +  A     T  +  H+IAVDVDRAELFC AC DQVYD D
Sbjct: 64  PRLYACLSCAAVFC------ASHAASHAATPPSPGHQIAVDVDRAELFCAACGDQVYDSD 117

Query: 135 FDAAVVLAHTTSI----IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
           FD AVVLA ++++      S+   + RKRRR+DYR W+PD  E +LM ++A P  S  ++
Sbjct: 118 FDHAVVLAQSSTLCPASTSSASAPSPRKRRRVDYRAWAPDPAESALM-SSADPATSARAA 176

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR------ 244
               P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNR+ C  +  +R      
Sbjct: 177 AAAAPPGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPMRHRAAGA 236

Query: 245 ----LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
                CLACDLD ++SA F G+R PYSPAKFLYSWW+HASNLASYEQQDAHEFFIS+LD 
Sbjct: 237 DAKAACLACDLDEIYSATFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDH 296

Query: 301 IHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
           IHE ++ +QHK   QG+GDCCIAHRVFSGILRSDV+C  CGF+STTF+PCVD SLDL+  
Sbjct: 297 IHENIKDEQHKSHEQGHGDCCIAHRVFSGILRSDVICTNCGFSSTTFEPCVDISLDLDAG 356

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             +S+        H+ N E +   +  N  +STLM CL+RFTR ERL ++QKFFC++C+ 
Sbjct: 357 SNNSLANPKL---HARNGERNLAGT--NSKVSTLMRCLERFTRAERLDAEQKFFCERCKE 411

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
           RQESLKQMSIR+LPLVSCFHIKRFEHSSV+KMSRKVD  LQFP SLDMAPYLSSS+LRSR
Sbjct: 412 RQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHSLQFPFSLDMAPYLSSSVLRSR 471

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITE 540
           +GNR FP +  +S+ ++E SSEFE+FAV+TH+GKLDAGHYVTYLRL+N WY+CDDAW+T 
Sbjct: 472 YGNRIFPSEASDSDAVSELSSEFEIFAVITHSGKLDAGHYVTYLRLNNLWYRCDDAWVTR 531

Query: 541 VNENTVRAAQGYMMFYVQKMLYYKASEKQGT 571
           V E+TVR +Q YM+FYVQK LYYKA E+ G 
Sbjct: 532 VEEHTVRTSQAYMLFYVQKTLYYKACERAGA 562


>gi|90399346|emb|CAH68425.1| H0811D08.10 [Oryza sativa Indica Group]
          Length = 562

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/568 (60%), Positives = 417/568 (73%), Gaps = 35/568 (6%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCP--RL 77
           P PCPHLA +  R+ T+  R ++ CL ++P G R  IRR+  E+PRC  C   +    RL
Sbjct: 7   PPPCPHLAAY--RHTTRSLRFLRRCLRVRPLG-RPEIRREPRELPRCSPCSSPTSSSSRL 63

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           YAC++CAAV C         A      S++  H+IAVDVDRAELFC AC DQVYD DFD 
Sbjct: 64  YACLSCAAVFC------PTHAASHASASTSGGHQIAVDVDRAELFCGACGDQVYDPDFDH 117

Query: 138 AVVLAHTTSIIQSSKPENL-------RKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
           AVVLA ++S+   S   +        RKRRR++YR W+PD  E +L+    S  D  +S+
Sbjct: 118 AVVLAQSSSLPPPSASPSPSPSPAAPRKRRRVEYRAWAPDPAEFALI----SSADPTTSA 173

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR------ 244
           +   P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNRY C  +  +R      
Sbjct: 174 SAAAPAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEA 233

Query: 245 ----LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
                CLACDLD ++SA F G+R PYSPAKFLYSWW+HASNLASYEQQDAHEFFIS+LD 
Sbjct: 234 NDKAACLACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDH 293

Query: 301 IHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
           IHE ++ DQHK  +QG+GDCCIAHRVFSGILRSDV C  CGFTSTTF+PC+D SLDL+  
Sbjct: 294 IHENIKDDQHKSHAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAG 353

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             +S+  ++ K  H  N E    +   N  +STLM CL+RFTR ERL ++QKFFC++C+ 
Sbjct: 354 YNNSLGVANPKV-HVRNGERS--SGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKE 410

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
           RQESLKQMSIR+LPLVSCFHIKRFEHSSV+KMSRKVD  LQFP SLDMAPYLSSSILRSR
Sbjct: 411 RQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSR 470

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITE 540
           FGNR FP +  ++++++E SSEFE+FAV+ H+GKL+AGHYVTYLRL+N WYKCDDAW+T 
Sbjct: 471 FGNRIFPSEASDADSVSEFSSEFEIFAVIMHSGKLEAGHYVTYLRLNNHWYKCDDAWVTR 530

Query: 541 VNENTVRAAQGYMMFYVQKMLYYKASEK 568
           V E+TVR +Q YM+FYVQK LYYKA E+
Sbjct: 531 VEEHTVRTSQAYMLFYVQKTLYYKACER 558


>gi|125591848|gb|EAZ32198.1| hypothetical protein OsJ_16406 [Oryza sativa Japonica Group]
          Length = 562

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/568 (60%), Positives = 417/568 (73%), Gaps = 35/568 (6%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCP--RL 77
           P PCPHLA +  R+ T+  R ++ CL ++P G R  IRR+  E+PRC  C   +    RL
Sbjct: 7   PPPCPHLAAY--RHTTRSLRFLRRCLRVRPLG-RPEIRREPRELPRCSPCSSPTSSSSRL 63

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           YAC++CAAV C         A      S++  H+IAVDVDRAELFC AC DQVYD DFD 
Sbjct: 64  YACLSCAAVFC------PTHAASHASASTSGGHQIAVDVDRAELFCGACGDQVYDPDFDH 117

Query: 138 AVVLAHTTSIIQSSKPENL-------RKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
           AVVLA ++S+   S   +        RKRRR++YR W+PD  E +L+    S  D  +S+
Sbjct: 118 AVVLAQSSSLPPPSASASPSPSPAAPRKRRRVEYRAWAPDPAEFALI----SSADPTTSA 173

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR------ 244
           +   P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNRY C  +  +R      
Sbjct: 174 SAAAPAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEA 233

Query: 245 ----LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
                CLACDLD ++SA F G+R PYSPAKFLYSWW+HASNLASYEQQDAHEFFIS+LD 
Sbjct: 234 NDKAACLACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDH 293

Query: 301 IHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
           IHE ++ DQHK  +QG+GDCCIAHRVFSGILRSDV C  CGFTSTTF+PC+D SLDL+  
Sbjct: 294 IHENIKDDQHKSLAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAG 353

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             +S+  ++ K  H  N E    +   N  +STLM CL+RFTR ERL ++QKFFC++C+ 
Sbjct: 354 YNNSLGVANPKV-HVRNGERS--SGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKE 410

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
           RQESLKQMSIR+LPLVSCFHIKRFEHSSV+KMSRKVD  LQFP SLDMAPYLSSSILRSR
Sbjct: 411 RQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSR 470

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITE 540
           FGNR FP +  ++++++E SSEFE+FAV+ H+GKL+AGHYVTYLRL+N WYKCDDAW+T 
Sbjct: 471 FGNRIFPSEASDADSVSEFSSEFEIFAVIMHSGKLEAGHYVTYLRLNNHWYKCDDAWVTR 530

Query: 541 VNENTVRAAQGYMMFYVQKMLYYKASEK 568
           V E+TVR +Q YM+FYVQK LYYKA E+
Sbjct: 531 VEEHTVRTSQAYMLFYVQKTLYYKACER 558


>gi|225430521|ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 553

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 323/561 (57%), Positives = 390/561 (69%), Gaps = 53/561 (9%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P+PC HLAD+  R+G   F+ +Q+CL   P  GR ++ +  SE PRC +C      RLY 
Sbjct: 11  PKPCKHLADYKLRHGLNGFKTLQNCLKTTP-YGRTSVSKHKSETPRCSLCFGYQ-GRLYF 68

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C++++C     SSH   H+    S   HEIAVDV+RAEL+CC CRDQVYD DFD AV
Sbjct: 69  CLICSSITC-----SSHANEHS---QSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRAV 120

Query: 140 VLAHTTSIIQSSKP-----ENLRKRRRIDY---RPWSPDLRERSLMVNNASPIDSMSSSN 191
           V  H   +  +        E   KRRR+       W    R  S+    A  I       
Sbjct: 121 VSKHFMDMPSNVNGVEGVVEESNKRRRLGLGLELEWKRSKRLISMADRRAKSI------- 173

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
              P GLRGLNNLGNTCFMNSVLQALFH PPLRNYFLSDRHNR  C+ ++  RLCL CD+
Sbjct: 174 --FPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDI 231

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
           D +FSA+F GDR PYSPA+FLYSWW+H+ NLASYEQQDAHEFFISMLD IH K  K  ++
Sbjct: 232 DVIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQ 291

Query: 312 PRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE----PNQGSSMK 366
            +   N DC CIAH+ FSG+LRSDV C  CGFTSTT+DPCVD SL+L+    P+ G  M 
Sbjct: 292 DKD--NRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTG--MT 347

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
             +TK N             +N  ISTL+GCLD FTRPE+LG DQK +CQ CQ R+ SLK
Sbjct: 348 NRTTKPN-------------ENAIISTLLGCLDLFTRPEKLGPDQKLYCQNCQERRNSLK 394

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           QMSIR+LP+V C HIKRFEHS++RKMSRK+D+YLQFP SLDM PYLSSSI+R+RFGNR F
Sbjct: 395 QMSIRRLPIVLCLHIKRFEHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSIVRNRFGNRIF 454

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
            F+GDES T     +EFE+FAVVTH+G L++GHYVTY+R+ N+WYKCDDAWITEV+E  V
Sbjct: 455 TFEGDESET----CTEFEVFAVVTHSGMLESGHYVTYVRVRNRWYKCDDAWITEVDEGVV 510

Query: 547 RAAQGYMMFYVQKMLYYKASE 567
           RA+Q Y+M+YVQK  YYKASE
Sbjct: 511 RASQCYLMYYVQKGFYYKASE 531


>gi|449455503|ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
 gi|449515075|ref|XP_004164575.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 552

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 314/555 (56%), Positives = 386/555 (69%), Gaps = 41/555 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKP-PGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P PC HLAD+  R G   +++IQ+  H+K  P GR +I+   S++PRCG C D    RLY
Sbjct: 11  PTPCNHLADYKLRYGLNGYKSIQN--HLKTSPNGRTSIQNPDSKLPRCGSC-DGYKGRLY 67

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
            C+ CA++SC     S+H  +H     S   H++AVDV+RAEL+C AC DQVYD DFD  
Sbjct: 68  ICLICASISC-----SNHTLLHY---QSENGHDLAVDVERAELYCYACSDQVYDPDFDRT 119

Query: 139 VVLAHTTSIIQS-SKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSS--SNGDLP 195
           V+  H     +S S+ E++ +R     R  S DL    L + N  P+ S+    S    P
Sbjct: 120 VMSKHIVVPEKSKSQSESIGERSSKRRRLGSVDL----LDLKNLKPLISVKDQRSKSCYP 175

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGLNNLGNTCFMNSVLQ   HTPPL NYFL+D+HNR  C  +   +LCL CD+D +F
Sbjct: 176 LGLRGLNNLGNTCFMNSVLQVFLHTPPLSNYFLNDQHNRETCSKRPIGQLCLPCDIDCIF 235

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           SA+F GD MPYSPA+FLYSWW+H++NLA YEQQDAHEFFIS+LD IHE+    + K RSQ
Sbjct: 236 SAVFSGDHMPYSPAQFLYSWWQHSANLACYEQQDAHEFFISVLDRIHER----ERKSRSQ 291

Query: 316 G--NGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
              NGDC CIAHR FSG LRSDV CM CGFTSTT+DPCVD SLDL+    SS   +   +
Sbjct: 292 DKENGDCKCIAHRAFSGQLRSDVTCMTCGFTSTTYDPCVDISLDLDTQDFSSRNIAGKLT 351

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
                  AD  +       STL GCLD FTRPE+LGSDQK FCQ CQ ++ S+KQMSIR+
Sbjct: 352 K-----PADFSSK------STLSGCLDLFTRPEKLGSDQKLFCQNCQEKRNSVKQMSIRR 400

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           LPLV C HIKRFEHS +R+ SRK+DRYLQFP SLDM PYLSSSI+R+RFGNR F  +GDE
Sbjct: 401 LPLVLCLHIKRFEHSFIRRTSRKIDRYLQFPFSLDMIPYLSSSIIRNRFGNRIFASEGDE 460

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
            +     SS+FE+FAVV+H+G L++GHYVTYLRL N+WYKCDDAWITEV+E  VR +Q Y
Sbjct: 461 LDA----SSKFEIFAVVSHSGTLESGHYVTYLRLRNRWYKCDDAWITEVDEEMVRNSQCY 516

Query: 553 MMFYVQKMLYYKASE 567
           MMFY+QK   +K++E
Sbjct: 517 MMFYLQKTASHKSNE 531


>gi|168025605|ref|XP_001765324.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683377|gb|EDQ69787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/616 (50%), Positives = 397/616 (64%), Gaps = 68/616 (11%)

Query: 7   HHHQNDKTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRC 66
           H H+ ++ +      PC HLA++ ARNG++  R +Q C+  +   GRA I+R++ EVPRC
Sbjct: 11  HEHRENRRDDASRLVPCEHLAEYRARNGSESLRVLQRCVKTEA-SGRACIKREAKEVPRC 69

Query: 67  GVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCAC 126
           G C  +   RLYAC+ C  + C  PP + H   HA        H IAVD++RAELFCC C
Sbjct: 70  GSCSRAR-GRLYACVVCGTIGCWSPPDALHARTHAQDNPG---HGIAVDIERAELFCCFC 125

Query: 127 RDQVYDRDFDAAVVLAH------------------------------------------- 143
            DQVYD DFD A++ A                                            
Sbjct: 126 GDQVYDVDFDRAIIAARADVLRRETEERRRNAGDVGDNLKKNVGSGCGRDGCGDFGAGSR 185

Query: 144 TTSIIQSSKP---------ENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
           T S +  S P         E+ ++RR I+Y+PW    +E+  +  +++P++        L
Sbjct: 186 TVSGLVVSSPCGGEVGNSHESRKRRRSIEYKPWVASGQEQLGLKQSSTPLND----GKKL 241

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
           P GLRGLNNLGNTCFMNSVLQAL HTPPLRNYFLSDRHN+  CQ +   +LCL CD+D +
Sbjct: 242 PAGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNQAMCQ-RGDAQLCLGCDMDII 300

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH-EKVEKDQHKPR 313
           F+A F GDR PYSPA FLYSWWR+ASNLA YEQQDAHEFFIS++ GIH E       K  
Sbjct: 301 FTAAFSGDRTPYSPANFLYSWWRYASNLAGYEQQDAHEFFISLVSGIHDEGGTTSSCKTT 360

Query: 314 SQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
             G+ +C C  HRVFSG+LRSDV C  C  TSTT+DPCVD SLDLEP+ G+  K  S   
Sbjct: 361 RSGDDNCHCKVHRVFSGLLRSDVTCTVCDLTSTTYDPCVDISLDLEPDFGTE-KGFSESI 419

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
            H+ +       +S   G S+L+GCLDRFTRPERLG+++K FC++CQ RQES+KQMSIRK
Sbjct: 420 IHAEHGGRTSRAASSASGASSLLGCLDRFTRPERLGANEKSFCERCQTRQESIKQMSIRK 479

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           +PLV CFHIKRF+ +  R   +K+DRY+QFPL LD+ PY+SSSI+R R GNR     GD 
Sbjct: 480 VPLVLCFHIKRFDFT--RNQPKKLDRYVQFPLFLDLLPYMSSSIVRLRHGNRLLSVSGDA 537

Query: 493 SNTL-NEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQG 551
           SN   ++  SEFELFAVVTH+GKLD+GHYV++LRL+  WYKCDDAWIT V E+ VRA+Q 
Sbjct: 538 SNLPPSQSPSEFELFAVVTHSGKLDSGHYVSFLRLNKCWYKCDDAWITRVTEDYVRASQA 597

Query: 552 YMMFYVQKMLYYKASE 567
           YM++YVQK L+YKAS+
Sbjct: 598 YMLYYVQKTLFYKASD 613


>gi|296082153|emb|CBI21158.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 307/561 (54%), Positives = 370/561 (65%), Gaps = 77/561 (13%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P+PC HLAD+  R+G   F+ +Q+CL   P  GR ++ +  SE PRC +C      RLY 
Sbjct: 11  PKPCKHLADYKLRHGLNGFKTLQNCLKTTP-YGRTSVSKHKSETPRCSLCFGYQ-GRLYF 68

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C++++C     SSH   H+    S   HEIAVDV+RAEL+CC CRDQVYD DFD AV
Sbjct: 69  CLICSSITC-----SSHANEHS---QSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRAV 120

Query: 140 VLAHTTSIIQSSKP-----ENLRKRRRIDY---RPWSPDLRERSLMVNNASPIDSMSSSN 191
           V  H   +  +        E   KRRR+       W    R  S+    A  I       
Sbjct: 121 VSKHFMDMPSNVNGVEGVVEESNKRRRLGLGLELEWKRSKRLISMADRRAKSI------- 173

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
              P GLRGLNNLGNTCFMNSVLQALFH PPLRNYFLSDRHNR  C+ ++  RLCL CD+
Sbjct: 174 --FPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDI 231

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
           D +FSA+F GDR PYSPA+FLYSWW+H+ NLASYEQQDAHEFFISMLD IH K  K  ++
Sbjct: 232 DVIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQ 291

Query: 312 PRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE----PNQGSSMK 366
            +   N DC CIAH+ FSG+LRSDV C  CGFTSTT+DPCVD SL+L+    P+ G  M 
Sbjct: 292 DKD--NRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTG--MT 347

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
             +TK N             +N  ISTL+GCLD FTRPE+LG DQK +CQ CQ R+ SLK
Sbjct: 348 NRTTKPN-------------ENAIISTLLGCLDLFTRPEKLGPDQKLYCQNCQERRNSLK 394

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           QMSIR+LP+V C HIKRFEHS++RKMSRK+D+YLQFP SLDM PYLSSSI+         
Sbjct: 395 QMSIRRLPIVLCLHIKRFEHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSIV--------- 445

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
                              FAVVTH+G L++GHYVTY+R+ N+WYKCDDAWITEV+E  V
Sbjct: 446 -------------------FAVVTHSGMLESGHYVTYVRVRNRWYKCDDAWITEVDEGVV 486

Query: 547 RAAQGYMMFYVQKMLYYKASE 567
           RA+Q Y+M+YVQK  YYKASE
Sbjct: 487 RASQCYLMYYVQKGFYYKASE 507


>gi|297603462|ref|NP_001054070.2| Os04g0647300 [Oryza sativa Japonica Group]
 gi|255675832|dbj|BAF15984.2| Os04g0647300, partial [Oryza sativa Japonica Group]
          Length = 591

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/422 (66%), Positives = 333/422 (78%), Gaps = 17/422 (4%)

Query: 157 RKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQA 216
           RKRRR++YR W+PD  E +L+    S  D  +S++   P GLRGLNNLGNTCFMNSVLQA
Sbjct: 173 RKRRRVEYRAWAPDPAEFALI----SSADPTTSASAAAPAGLRGLNNLGNTCFMNSVLQA 228

Query: 217 LFHTPPLRNYFLSDRHNRYYCQSKNGVR----------LCLACDLDTMFSAIFCGDRMPY 266
           L H PPLRNYFL DRHNRY C  +  +R           CLACDLD ++SA F G+R PY
Sbjct: 229 LLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLACDLDEIYSAAFSGERTPY 288

Query: 267 SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRV 326
           SPAKFLYSWW+HASNLASYEQQDAHEFFIS+LD IHE ++ DQHK  +QG+GDCCIAHRV
Sbjct: 289 SPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQHKSLAQGHGDCCIAHRV 348

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSS 386
           FSGILRSDV C  CGFTSTTF+PC+D SLDL+    +S+  ++ K  H  N E    +  
Sbjct: 349 FSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVANPKV-HVRNGERS--SGG 405

Query: 387 QNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
            N  +STLM CL+RFTR ERL ++QKFFC++C+ RQESLKQMSIR+LPLVSCFHIKRFEH
Sbjct: 406 TNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEH 465

Query: 447 SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           SSV+KMSRKVD  LQFP SLDMAPYLSSSILRSRFGNR FP +  ++++++E SSEFE+F
Sbjct: 466 SSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEFSSEFEIF 525

Query: 507 AVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
           AV+ H+GKL+AGHYVTYLRL+N WYKCDDAW+T V E+TVR +Q YM+FYVQK LYYKA 
Sbjct: 526 AVIMHSGKLEAGHYVTYLRLNNHWYKCDDAWVTRVEEHTVRTSQAYMLFYVQKTLYYKAC 585

Query: 567 EK 568
           E+
Sbjct: 586 ER 587


>gi|356563930|ref|XP_003550210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 555

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 298/557 (53%), Positives = 380/557 (68%), Gaps = 43/557 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P+PC HLA++  ++G   ++AIQ  L I P G +A++++ +++VPRCG C      R Y 
Sbjct: 12  PEPCQHLAEYKLKHGFDGYKAIQKLLVISPIG-KASVKKPNTKVPRCGFCNGCE-GRFYL 69

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C++ SC       H  +H     S   H + VD++RAELFC  CRDQ+YD DFD  V
Sbjct: 70  CLICSSFSC-----LDHTLLHP---QSETGHAVFVDIERAELFCGVCRDQLYDPDFDQVV 121

Query: 140 VLAHTTSII-----QSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
           +  H+  +        S  + L KRRR+       DL++    V+     +         
Sbjct: 122 MSKHSLGVASGVTGNESIGQRLIKRRRLASGVVGLDLQKSKCRVSTKDLREKSC-----Y 176

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL--CLACDLD 252
           P GLRGLNNLG+TCFMNSVLQ L + PP R+YFLS  H    C  +    L  CL CD++
Sbjct: 177 PVGLRGLNNLGSTCFMNSVLQVLLNAPPFRDYFLSGGHRLEACHHRRTADLMCCLLCDVN 236

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +FSA + GDR PYSPA+FLYSWW+H++NLA YEQQDAHEFFISMLD IHEK  K ++  
Sbjct: 237 AIFSAAYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAHEFFISMLDAIHEKESKTRNG- 295

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS-T 370
            S+GNGDC CIAH+VF G+LRSDV CMACGFTSTT+DPCVD SL+L+ N  S+ K    T
Sbjct: 296 -SKGNGDCQCIAHKVFYGLLRSDVTCMACGFTSTTYDPCVDISLNLDTNVSSTEKGKKLT 354

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
           K N       DG        +STL GCLD FTRPE+LGSDQK +C+ C+ RQ+SLKQMSI
Sbjct: 355 KQNE------DG-------SMSTLFGCLDLFTRPEKLGSDQKLYCRNCRERQDSLKQMSI 401

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
           RKLPLV   H+KRFEHS V+K SRK+DRYL FP SLDM+PYLSSSILR+R+GNR F F G
Sbjct: 402 RKLPLVLSLHVKRFEHSFVKKSSRKIDRYLHFPFSLDMSPYLSSSILRARYGNRIFNFGG 461

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ 550
           D+S+      SEFE+FAVVTH+G L++GHYV+++RL N+WY+CDDAWIT V+E TVRA+Q
Sbjct: 462 DQSDMF----SEFEIFAVVTHSGTLESGHYVSFVRLRNQWYRCDDAWITVVDEATVRASQ 517

Query: 551 GYMMFYVQKMLYYKASE 567
            YM+FYVQK+ + KA+E
Sbjct: 518 CYMIFYVQKLQHNKANE 534


>gi|255548704|ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
 gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
          Length = 551

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 299/559 (53%), Positives = 380/559 (67%), Gaps = 50/559 (8%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P+ C HLAD+  R+G   ++ +Q+CL   P G  +  + D+ ++PRC  C      R + 
Sbjct: 11  PKLCKHLADYKLRHGLSGYKFLQNCLKTTPSGITSVYKSDT-KIPRCSFCKGYQ-GRFFM 68

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C+++S      SSH  +HA    S  SH+IAVD++R+EL+C  C DQVYD DFD  V
Sbjct: 69  CLICSSIS-----CSSHTLLHA---QSENSHDIAVDIERSELYCSLCSDQVYDPDFDKVV 120

Query: 140 VLAHTTSIIQSSKPENLR----------KRRRIDYRPWSPDLRERSLMVNNASPIDSMSS 189
           V     S +    P N            KRR+++       L E  L  +    +     
Sbjct: 121 V-----SKVMLDMPNNAHIVDDGIRRSSKRRKLN------SLMELDLKKSKQLVLMRDRR 169

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                P GLRGLNNLG+TCFMNSVLQAL H PP RNYFLSDRH+R  C+ ++  RLCLAC
Sbjct: 170 EKSCYPLGLRGLNNLGSTCFMNSVLQALLHAPPFRNYFLSDRHDRDTCRKRSLDRLCLAC 229

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++D + SA++ GDR PYSPA+FLYSWW+H++NLASYEQQDAHEFFI++LDGIHE  E + 
Sbjct: 230 NIDVIISALYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFIALLDGIHES-EGNG 288

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
             P ++ NGDC CIAHRVFSG LRSDV CM CGFTSTT+DPCVD SLD++ +  S+    
Sbjct: 289 RTP-NKDNGDCQCIAHRVFSGRLRSDVTCMTCGFTSTTYDPCVDISLDMDTSMSST---- 343

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                   +     +  ++N G  TL  CLD FTRPE+LGSDQK +CQ C+ +++S KQM
Sbjct: 344 --------DVPNKSVRPNENAGKCTLSACLDLFTRPEKLGSDQKLYCQNCEEKRDSFKQM 395

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           SI++LPLV   HIKRFEHS VRK+SRK+D +LQFP SLDM  YLSSSILR RFGNR F F
Sbjct: 396 SIKRLPLVLSLHIKRFEHSPVRKLSRKIDWHLQFPFSLDMTSYLSSSILRKRFGNRIFAF 455

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
           D DE++T    S+EFE+FAV+TH+G L++GHYVTYLRL N+WYKCDDAWITEV+E  VRA
Sbjct: 456 DSDEADT----SAEFEIFAVITHSGMLESGHYVTYLRLRNQWYKCDDAWITEVDETIVRA 511

Query: 549 AQGYMMFYVQKMLYYKASE 567
           +Q YM+FYVQK  YYKA+E
Sbjct: 512 SQCYMIFYVQKTHYYKANE 530


>gi|356552474|ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 554

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/557 (52%), Positives = 378/557 (67%), Gaps = 43/557 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P+PC HLA++  ++G   ++AIQ  L +  P G+ ++++ +++VPRCG C      R Y 
Sbjct: 11  PEPCQHLAEYKLKHGFNGYKAIQKLL-VTSPIGKTSVKKPNTKVPRCGFCNGCE-GRFYL 68

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C++ SC       H  +H    S    H + VD++R EL+C  CRDQ+YD DFD  V
Sbjct: 69  CLICSSFSC-----LDHTLLHPQSESG---HAVFVDIERTELYCGVCRDQLYDPDFDQVV 120

Query: 140 VLAHTTSII-----QSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
           +  H+  +        S  + L KRRR+       DL++    V   S  D    S    
Sbjct: 121 MSKHSMGVAGGATGNESIGQRLIKRRRLVSGIVGLDLQKSKCRV---STKDLRGKSC--Y 175

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL--CLACDLD 252
           P GLRGLNNLG+TC+MNSVLQ L H PP R+YFLS       C  +    L  CL CD++
Sbjct: 176 PLGLRGLNNLGSTCYMNSVLQVLLHAPPFRDYFLSGGQRLEACHHRRATDLMCCLLCDVN 235

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +FSA++ GDR PYSPA+FLYSWW+H++NLA YEQQDAHEFFISMLD IHEK  K ++  
Sbjct: 236 AIFSAVYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAHEFFISMLDAIHEKEGKTRNG- 294

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS-T 370
            S+GNGDC CIAH+VF G+LRSDV CMACGFTSTT+DPCVD SL+L+ +  S+ K    T
Sbjct: 295 -SKGNGDCQCIAHKVFYGLLRSDVTCMACGFTSTTYDPCVDISLNLDTDVSSTEKGKKLT 353

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
           K N       DG        +STL GCLD FTRPE+LGSDQK +CQ C+ RQ+SLKQMSI
Sbjct: 354 KQNE------DG-------SMSTLSGCLDLFTRPEKLGSDQKLYCQNCRERQDSLKQMSI 400

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
           RKLPLV   H+KRFEHS V+K SRK+DRYL FP SLDM PYLSSSILR+R+GNR F F G
Sbjct: 401 RKLPLVLSLHVKRFEHSFVKKCSRKIDRYLHFPFSLDMTPYLSSSILRARYGNRNFTFGG 460

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ 550
           D+S+      SEFE+FAVVTH+G L++GHYV+++R+ N+WY+C+DAWIT V+E TVRA+Q
Sbjct: 461 DQSDMF----SEFEIFAVVTHSGTLESGHYVSFVRVRNQWYRCNDAWITVVDEATVRASQ 516

Query: 551 GYMMFYVQKMLYYKASE 567
            YM+FYVQK L+ KA+E
Sbjct: 517 CYMIFYVQKTLHNKANE 533


>gi|224092623|ref|XP_002309685.1| predicted protein [Populus trichocarpa]
 gi|222855661|gb|EEE93208.1| predicted protein [Populus trichocarpa]
          Length = 519

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 279/541 (51%), Positives = 375/541 (69%), Gaps = 42/541 (7%)

Query: 13  KTNGQIF--PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCG 70
           +T   +F  P+PC HL D+  R+G   ++ +Q  L   P  G+ +I+   +++P+C  C 
Sbjct: 2   ETRSSVFANPKPCKHLTDYKLRHGLSGYKFLQKWLKTFP-NGKTSIKMCETKMPKCSFCS 60

Query: 71  DSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQV 130
                RL+ C+ C+++SC     S H  +H+    S   H+IAVD++R+EL+CC+C DQV
Sbjct: 61  GIRQGRLFLCLICSSMSC-----SDHTLLHS---QSENGHDIAVDIERSELYCCSCSDQV 112

Query: 131 YDRDFDAAVV---LAHTTSIIQSSKPENL----RKRRRIDYRPWSPDLRERSLMVNNASP 183
           YD DFD  VV   +    S  + S  ++L     KRRR++       +R +  +      
Sbjct: 113 YDLDFDKVVVAKNIVDMPSKTRDSVVDDLMRRSSKRRRLNSVVDLDLIRSKFFVWMRGRR 172

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
             S        P GLRGLNNLG+TCFMNS+LQAL H PP RNYFLS+RH+R  C+ ++  
Sbjct: 173 AKSC------YPLGLRGLNNLGSTCFMNSILQALLHAPPFRNYFLSERHDRETCRKRSSD 226

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
           + CLACD+  +FSA++ GDR PYSPA+FLYSWW+H++NLASYEQQDAHEFFIS+LDGIHE
Sbjct: 227 QSCLACDIGVIFSAVYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDGIHE 286

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +  K+++   ++ NGDC CIAHRVFSG+LRSD+ C  CGFTSTT+DPCVD SL+++ +  
Sbjct: 287 REGKERNP--NKDNGDCQCIAHRVFSGMLRSDLTCTTCGFTSTTYDPCVDISLNMDTSSF 344

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
           SS+  ++             +  +++ G STL+ CLD FTRPERLGSDQK +CQ CQ ++
Sbjct: 345 SSVDVANK-----------SVRPNEDTGSSTLLACLDLFTRPERLGSDQKLYCQNCQEKR 393

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           +SLKQMSI++LPLV   HIKRFEHSS+R+ SRK+D +LQFP SLDM PYLS SI+R+RFG
Sbjct: 394 DSLKQMSIKRLPLVLSLHIKRFEHSSLRRTSRKIDWHLQFPFSLDMTPYLSPSIVRNRFG 453

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           NR F F+ DE++     S+EFE+FAVVTH+G LD+GHYVTYLRL N+WYKCDDAWITEV+
Sbjct: 454 NRIFGFESDEADI----SAEFEIFAVVTHSGMLDSGHYVTYLRLQNQWYKCDDAWITEVD 509

Query: 543 E 543
           E
Sbjct: 510 E 510


>gi|302784140|ref|XP_002973842.1| hypothetical protein SELMODRAFT_100312 [Selaginella moellendorffii]
 gi|300158174|gb|EFJ24797.1| hypothetical protein SELMODRAFT_100312 [Selaginella moellendorffii]
          Length = 572

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 294/573 (51%), Positives = 370/573 (64%), Gaps = 79/573 (13%)

Query: 21  QPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRR---DSSEVPRCGVCGDSSCPRL 77
           +PC HL D+ +++ T+ FRA+Q C+ + PPG R ++R    D   VPRC  C  S   RL
Sbjct: 11  RPCEHLVDYKSKHSTRGFRALQRCIVVLPPG-RPSVRTLSCDEDPVPRCASCAKSH-GRL 68

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           YAC+ C+ +S     +SS  +   +       HE+A+D+DRAELFCC C DQVYD DFD 
Sbjct: 69  YACLICSTIS----CYSSSSSHARSHALELPGHELAIDLDRAELFCCICNDQVYDADFDW 124

Query: 138 AVVLAHTTSIIQ--------SSKPENLRKRRR---IDYRPWSPDLRERSLMVNNASPIDS 186
            VV AH +S+ +        ++ P N+  R+R    +Y+PW P  ++  ++   A+P+  
Sbjct: 125 VVVCAHASSLAKCTSFSNGRTAPPLNVYSRKRNRGAEYKPWEPSSKDPLVLERGAAPL-- 182

Query: 187 MSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC 246
                     GLRGL N+G+TCFMNSVLQAL HTPPLR+YFL   HN+  CQSK    +C
Sbjct: 183 ----------GLRGLTNMGSTCFMNSVLQALLHTPPLRSYFLGHCHNKAACQSK----VC 228

Query: 247 LACDLDTMFSAIFCGDRMPYSPAKFLY-----------SWWRHASNLASYEQQDAHEFFI 295
           L CD+D MF+A F GDR PYSPA+FLY           SWW+HA+NLA YEQQDAH+FFI
Sbjct: 229 LGCDMDDMFAAAFSGDRTPYSPAQFLYRRYLFLFSFLNSWWQHAANLAGYEQQDAHDFFI 288

Query: 296 SMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFS 354
           S ++GIH   +  Q + R   + +C CI HRVFSG+LRSDV C ACGFTST  DPCVD S
Sbjct: 289 SAVEGIHANSQ--QPELRKGNDAECRCIVHRVFSGLLRSDVTCTACGFTSTKNDPCVDIS 346

Query: 355 LDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFF 414
           LDLE         +S+                     STL+GCLDRFTRPERLGS+++FF
Sbjct: 347 LDLESTALEKQIYASS---------------------STLLGCLDRFTRPERLGSNERFF 385

Query: 415 CQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS 474
           C+ CQ RQE++KQMS+RKLP+V CFH+KRFEHS+  K  RKVD Y+QFPLSL+MA YLSS
Sbjct: 386 CESCQSRQEAVKQMSVRKLPVVLCFHVKRFEHSA--KNYRKVDTYVQFPLSLNMACYLSS 443

Query: 475 SILRSRFGNRFF------PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN 528
           SI R R GNR           GD  +    PSSEFELFAVV+H+GKLD GHYV YLRL  
Sbjct: 444 SIARLRHGNRLIFVEGKGELGGDNDSGSTSPSSEFELFAVVSHSGKLDGGHYVAYLRLGG 503

Query: 529 KWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           +WYKCDDAWIT V E+ VRA Q YM++YVQ+ L
Sbjct: 504 EWYKCDDAWITRVGESVVRATQAYMLYYVQRSL 536


>gi|302803594|ref|XP_002983550.1| hypothetical protein SELMODRAFT_118322 [Selaginella moellendorffii]
 gi|300148793|gb|EFJ15451.1| hypothetical protein SELMODRAFT_118322 [Selaginella moellendorffii]
          Length = 567

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 295/568 (51%), Positives = 366/568 (64%), Gaps = 74/568 (13%)

Query: 21  QPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSE---VPRCGVCGDSSCPRL 77
           +PC HL D+ +++ T+ FR +Q C+ + PPG R ++R  S E   VPRC  C  S   RL
Sbjct: 11  RPCEHLVDYKSKHSTRGFRVLQRCIVVLPPG-RPSVRTLSCEEDPVPRCASCAKSH-GRL 68

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           YAC+ C  +SC+    SS  +   +       HE+A+D+DRAELFCC C DQVYD DFD 
Sbjct: 69  YACLVCFTISCY----SSSSSHARSHALELPGHELAIDLDRAELFCCICNDQVYDADFDW 124

Query: 138 AVV-LAHTTSII--QSSKPENLRKRRR---IDYRPWSPDLRERSLMVNNASPIDSMSSSN 191
            VV LA  TS    +++ P N+  R+R    +Y+PW P  ++  ++   A+P+       
Sbjct: 125 VVVSLAKCTSFSNGRTAPPLNVYSRKRNRGAEYKPWEPSSKDPLVLERGAAPL------- 177

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
                GLRGL N+G+TCFMNSVLQAL HTPPLR+YFL  RHN+  CQSK    +CL CD+
Sbjct: 178 -----GLRGLTNMGSTCFMNSVLQALLHTPPLRSYFLGHRHNKAACQSK----VCLGCDM 228

Query: 252 DTMFSAIFCGDRMPYSPAKFLY-----------SWWRHASNLASYEQQDAHEFFISMLDG 300
           D MF+A F GDR PYSPA+FLY           SWW+HA+NLA YEQQDAH+FFIS ++G
Sbjct: 229 DDMFAAAFSGDRTPYSPAQFLYRRYLFLFSFLNSWWQHAANLAGYEQQDAHDFFISAVEG 288

Query: 301 IHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           IH   +  Q + R   + +C CI HRVF G+LRSDV C ACGFTST  DPCVD SLDLE 
Sbjct: 289 IHANSQ--QPELRKGNDAECRCIVHRVFFGLLRSDVTCTACGFTSTKNDPCVDISLDLES 346

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
                   +S+                     STL+GCLDRFTRPERL S ++FFC+ CQ
Sbjct: 347 TALEKQIYASS---------------------STLLGCLDRFTRPERLSSSERFFCESCQ 385

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
            RQE++KQMS+RKLP+V  FH+KRFEHS+  K  RKVD Y+QFPLSLDMA YLSSSI R 
Sbjct: 386 SRQEAVKQMSVRKLPVVLSFHVKRFEHSA--KNYRKVDTYVQFPLSLDMACYLSSSIARL 443

Query: 480 RFGNRFF------PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKC 533
           R GNR           GD  +    PSSEFELFAVV+H+GKLD GHYV YLRL  +WYKC
Sbjct: 444 RHGNRLIFVEGKGELGGDNDSGSTSPSSEFELFAVVSHSGKLDGGHYVAYLRLGGEWYKC 503

Query: 534 DDAWITEVNENTVRAAQGYMMFYVQKML 561
           DDAWIT V E+ VRA Q YM++YVQ+ L
Sbjct: 504 DDAWITRVGESVVRATQAYMLYYVQRTL 531


>gi|224143342|ref|XP_002324922.1| predicted protein [Populus trichocarpa]
 gi|222866356|gb|EEF03487.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 280/482 (58%), Positives = 349/482 (72%), Gaps = 36/482 (7%)

Query: 94  SSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV---LAHTTSIIQS 150
           S H  +HA    S   H+IAVD++R+EL+CC C DQVYD DFD  VV   +    S    
Sbjct: 4   SDHTLLHA---QSENGHDIAVDIERSELYCCLCSDQVYDPDFDKVVVSKNIMDMPSKTHD 60

Query: 151 SKPENL----RKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGN 206
           S  ++L     KRRR++      DL+   L+V   S +D  + S    P GLRGLNNLG+
Sbjct: 61  SVVDDLMRRSSKRRRLN-PVVDLDLKRSKLLV---SMMDRRAKSC--YPLGLRGLNNLGS 114

Query: 207 TCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPY 266
           TCFMNSVLQAL H PP RNYFLS+RH+   C+ ++  +LCLACD   +FSA++ GDR PY
Sbjct: 115 TCFMNSVLQALLHAPPFRNYFLSERHDPETCKKRSSDQLCLACDFGVIFSAVYSGDRTPY 174

Query: 267 SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHR 325
           SPA+FLYSWW+H++NLASYEQQDAHEFFIS+LDGIHE+  K+  +  ++ NG C CIAHR
Sbjct: 175 SPAQFLYSWWQHSANLASYEQQDAHEFFISVLDGIHEREGKE--RSSNKDNGGCQCIAHR 232

Query: 326 VFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNS 385
           VFSG+LRSDV C  CGFTSTT+DPCVD SL+++    S++  ++              + 
Sbjct: 233 VFSGMLRSDVTCTTCGFTSTTYDPCVDISLNMDTTNFSTVNVANK-------------SV 279

Query: 386 SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
            ++ G STL+ CLD FTRPERLGSDQK +CQ CQ +++SLKQMSI++LPLV   HIKRFE
Sbjct: 280 REDTGRSTLLACLDLFTRPERLGSDQKLYCQNCQEKRDSLKQMSIKRLPLVLSLHIKRFE 339

Query: 446 HSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
           HSS+R+ SRK+D YLQFP SLDM PYLS SI+R+RFGNR F F+ D+ +     SSEFE+
Sbjct: 340 HSSLRRSSRKIDWYLQFPFSLDMTPYLSPSIVRNRFGNRVFGFESDKPDI----SSEFEI 395

Query: 506 FAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKA 565
           FAVVTH+G LD+GHYVTYLRL N+WYKCDDAWITEV+E  VRAAQ YM+FYVQKMLY KA
Sbjct: 396 FAVVTHSGMLDSGHYVTYLRLQNQWYKCDDAWITEVDERIVRAAQCYMIFYVQKMLYCKA 455

Query: 566 SE 567
           +E
Sbjct: 456 NE 457


>gi|357437207|ref|XP_003588879.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355477927|gb|AES59130.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 733

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 292/613 (47%), Positives = 378/613 (61%), Gaps = 109/613 (17%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P+PC HL+D+  ++G   ++AIQ  L +  P GR ++++ +  + RC  C      R++ 
Sbjct: 12  PEPCNHLSDYKLKHGFNGYKAIQKLL-VTSPIGRTSLKKPNLRILRCSFCNGCE-KRVFL 69

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C++  C       H  +H    +    H++ VDV+R EL+C  C DQ+YD DFD  V
Sbjct: 70  CLICSSFCC-----LDHTLLHIQTENG---HDLFVDVERCELYCGVCCDQIYDPDFDQFV 121

Query: 140 VLAHTTS-----IIQSSKPENLRKRRRI------------DYRPWSPDLRERSLMVNNAS 182
           +  H+       +   S  + L KRRR+             +R  + DLR +S       
Sbjct: 122 MAKHSMVLPNGVVGNESIGQRLIKRRRLVSGVGLYLQNESKFRFETKDLRGKSC------ 175

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                       P GLRGLN+LG+TCFMNSVLQAL H PP R+YFLS  H+   C+ +  
Sbjct: 176 -----------FPEGLRGLNSLGSTCFMNSVLQALLHAPPFRDYFLSGGHSLEDCKRRTT 224

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
            RLCL CD++T+FSA++ GDR PYSPA+FLYSWW+H++NLASYEQQDAHEFFISMLD IH
Sbjct: 225 ERLCLICDINTVFSAMYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIH 284

Query: 303 EK--VEKDQHK--------------------------------------PRSQ------G 316
           EK  + K+  K                                      P  +       
Sbjct: 285 EKEGITKNGSKGIEILILGFSSAILLSHMHRGTVYVMIYDSYSCLHIVLPYKKIILMQCN 344

Query: 317 NGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS-TKSNH 374
            GDC CIAHRVF G LRS+V CMACGFTSTT+DP +D SL+L+ N   + K    TK N 
Sbjct: 345 GGDCQCIAHRVFYGQLRSEVTCMACGFTSTTYDPFLDISLNLDINISLTEKGKKLTKQNA 404

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N             +STL+GCLD FTRPE+LGSDQK +CQ C+ RQ +LKQMSI KLP
Sbjct: 405 DDN-------------MSTLLGCLDLFTRPEKLGSDQKLYCQNCKERQNALKQMSISKLP 451

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           LV   H+KRFEHS V+K+SRK+DRYLQFP SLDM PYLSSSILR+++GNR F F GDES+
Sbjct: 452 LVLTLHVKRFEHSFVKKLSRKIDRYLQFPFSLDMTPYLSSSILRAKYGNRIFNFGGDESD 511

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMM 554
           T     S+FE+FAVVTH+G L++GHYVT++RL  +WY+CDDAWIT+V+E TVRA+Q YM+
Sbjct: 512 TF----SKFEIFAVVTHSGTLESGHYVTFVRLRKQWYRCDDAWITKVDEATVRASQCYMI 567

Query: 555 FYVQKMLYYKASE 567
           FYVQK LY KA+E
Sbjct: 568 FYVQKTLYNKANE 580


>gi|38344011|emb|CAE03179.2| OSJNBa0070O11.10 [Oryza sativa Japonica Group]
 gi|215704828|dbj|BAG94856.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 370

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 251/369 (68%), Positives = 296/369 (80%), Gaps = 13/369 (3%)

Query: 210 MNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR----------LCLACDLDTMFSAIF 259
           MNSVLQAL H PPLRNYFL DRHNRY C  +  +R           CLACDLD ++SA F
Sbjct: 1   MNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLACDLDEIYSAAF 60

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            G+R PYSPAKFLYSWW+HASNLASYEQQDAHEFFIS+LD IHE ++ DQHK  +QG+GD
Sbjct: 61  SGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQHKSLAQGHGD 120

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
           CCIAHRVFSGILRSDV C  CGFTSTTF+PC+D SLDL+    +S+  ++ K  H  N E
Sbjct: 121 CCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVANPKV-HVRNGE 179

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
               +   N  +STLM CL+RFTR ERL ++QKFFC++C+ RQESLKQMSIR+LPLVSCF
Sbjct: 180 RS--SGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCF 237

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           HIKRFEHSSV+KMSRKVD  LQFP SLDMAPYLSSSILRSRFGNR FP +  ++++++E 
Sbjct: 238 HIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEF 297

Query: 500 SSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           SSEFE+FAV+ H+GKL+AGHYVTYLRL+N WYKCDDAW+T V E+TVR +Q YM+FYVQK
Sbjct: 298 SSEFEIFAVIMHSGKLEAGHYVTYLRLNNHWYKCDDAWVTRVEEHTVRTSQAYMLFYVQK 357

Query: 560 MLYYKASEK 568
            LYYKA E+
Sbjct: 358 TLYYKACER 366


>gi|18416377|ref|NP_568239.1| ubiquitin carboxyl-terminal hydrolase 22 [Arabidopsis thaliana]
 gi|75263829|sp|Q9LEW0.1|UBP22_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
           Full=Deubiquitinating enzyme 22; Short=AtUBP22; AltName:
           Full=Ubiquitin thioesterase 22; AltName:
           Full=Ubiquitin-specific-processing protease 22
 gi|8979713|emb|CAB96834.1| ubiquitin specific protease-like protein [Arabidopsis thaliana]
 gi|332004214|gb|AED91597.1| ubiquitin carboxyl-terminal hydrolase 22 [Arabidopsis thaliana]
          Length = 557

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 277/559 (49%), Positives = 355/559 (63%), Gaps = 39/559 (6%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P PC HL+D+  R GT  +++  +         R  I+    ++PRC  C      RLY 
Sbjct: 11  PDPCNHLSDYKLRYGTDGYKSFNNLFRCFN-DARIKIKLQGIDIPRCSYCSVYQ-KRLYI 68

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C ++SC     SSH+ +H   T     H+IA+DV+R+EL+CCAC DQVYD +FD  V
Sbjct: 69  CLICRSISC-----SSHILLH---TQLNKGHDIAIDVERSELYCCACIDQVYDSEFDEVV 120

Query: 140 VLAHTTSIIQSSK------PENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD 193
           V      +  S K           K+RR+D    S  +   + +V   SP D        
Sbjct: 121 VSKQLFGLGMSVKSGADVVAVRSNKKRRLD----SQLIIGSNFLV---SPRDR--REKWT 171

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
            P GLRGLNNLG+TCFMN+VLQAL H PPLRN++LS +HNR  C  +    LCL CDLD 
Sbjct: 172 FPLGLRGLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDV 231

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
           +FSA+F GDR PYSPA  LYSWW+H++NLA+YEQQD+HEFFIS+LD IHE   + + K  
Sbjct: 232 IFSAMFSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHEN--EGKSKCL 289

Query: 314 SQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
            Q N +C CI H+ FSG+LRSDV C  CG TSTT+DP +D SL L+   G S      K+
Sbjct: 290 YQDNEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFS-PADCRKN 348

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
            +S          S N  + TL GCLD FTR E+LG DQK  CQ C  ++ES KQMSIR+
Sbjct: 349 RYS-------GGPSVNAIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRR 401

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD- 491
           LPL+ C H+KRFEHS  RK SRK+D YLQ+P  L+M+PYLSSSI+  RFGNR F FDG+ 
Sbjct: 402 LPLLLCLHVKRFEHSLTRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEG 461

Query: 492 --ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAA 549
             +S++ + PS+EFE+FAVVTH G L++GHYVTYLRL   WY+CDDAWI EV E  VR  
Sbjct: 462 EYDSSSSSSPSAEFEIFAVVTHKGMLESGHYVTYLRLKGLWYRCDDAWINEVEEEVVRGC 521

Query: 550 QGYMMFYVQKMLYYKASEK 568
           + YM+FY Q+ +  KA ++
Sbjct: 522 ECYMLFYAQETVIQKAHKE 540


>gi|297807115|ref|XP_002871441.1| ubiquitin-specific protease 22 [Arabidopsis lyrata subsp. lyrata]
 gi|297317278|gb|EFH47700.1| ubiquitin-specific protease 22 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 277/557 (49%), Positives = 354/557 (63%), Gaps = 39/557 (7%)

Query: 22  PCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           PC HL+D+  R GT  +++  +        GR  I+    ++PRC  C      RLY C+
Sbjct: 13  PCNHLSDYKLRYGTDGYKSFNNLFRCFN-DGRIKIKLQGFDIPRCSYCSVYQ-KRLYICL 70

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 141
            C ++SC     SSH+ +H   T     H+IA+DV+R+EL+CCAC DQVYD +FD  VV 
Sbjct: 71  ICRSISC-----SSHILLH---TQLNKGHDIAIDVERSELYCCACIDQVYDSEFDEVVVS 122

Query: 142 AHTTSIIQSSK------PENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                +  S K           K+RR+D    S  +     +V   SP D         P
Sbjct: 123 KQLIGLGMSVKSGADVVAVRSNKKRRLD----SQLIIGSKFLV---SPRDR--REKWTFP 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGLNNLG+TCFMN+VLQAL H PPLRN++LS +HNR  C  +    LCL CDLD +F
Sbjct: 174 LGLRGLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIF 233

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           SA+F GDR PYSPA  LYSWW+H++NLA+YEQQD+HEFFIS+LD IHE   K   K   Q
Sbjct: 234 SAMFSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKS--KCLYQ 291

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
            + +C CI H+ FSG+LRSDV C  CG TSTT+DP +D SL L+   G S      K+ +
Sbjct: 292 DHEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSVNGFS-PADCRKNRY 350

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
           S          S N  + TL GCLD FTR E+LG DQK  CQ C  ++ES KQMSIR+LP
Sbjct: 351 S-------GGPSVNATMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLP 403

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD--- 491
           L+ C H+KRFEHS  RK SRK+D YLQ+P  L+M+PYLSSSI+  RFGNR F FDG+   
Sbjct: 404 LLLCLHVKRFEHSLTRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEY 463

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQG 551
           +S++ + PS+EFE+FAVVTH+G L++GHYVTYLRL   WY+CDDAWI EV E  VR  + 
Sbjct: 464 DSSSSSSPSAEFEIFAVVTHSGMLESGHYVTYLRLKGLWYRCDDAWINEVEEEVVRGCEC 523

Query: 552 YMMFYVQKMLYYKASEK 568
           YM+FY Q+ +  KA ++
Sbjct: 524 YMLFYAQERVIQKAHKE 540


>gi|11993484|gb|AAG42760.1|AF302670_1 ubiquitin-specific protease 22 [Arabidopsis thaliana]
          Length = 557

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/559 (49%), Positives = 352/559 (62%), Gaps = 39/559 (6%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P PC HL+D+  R GT  +++  +         R  I+    ++PRC  C      RLY 
Sbjct: 11  PDPCNHLSDYKLRYGTDGYKSFNNLFRCFN-DARIKIKLQGIDIPRCSYCSVYQ-KRLYI 68

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C ++SC     SSH+ +H   T     H+IA+DV+R+EL+CCAC DQ YD +FD  V
Sbjct: 69  CLICRSISC-----SSHILLH---TQLNKGHDIAIDVERSELYCCACIDQAYDSEFDEVV 120

Query: 140 VLAHTTSIIQSSK------PENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD 193
           V      +  S K           K+RR+D    S  +   + +V   SP D        
Sbjct: 121 VSKQLFGLGMSVKSGADVVAVRSNKKRRLD----SQLIIGSNFLV---SPRDR--REKWT 171

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
            P GLRGLNNLG+TCFMN+VLQAL H PPLRN++LS +HNR  C  +    LCL CDLD 
Sbjct: 172 FPLGLRGLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDI 231

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
           +FSA+F GDR PYSPA  LYSWW+H++NLA+YEQQD+HEFFIS+LD IHE   K   K  
Sbjct: 232 IFSAMFSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKS--KCL 289

Query: 314 SQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
            Q N +C CI H+ FSG+LRSDV C  CG TSTT+DP +D SL L+   G S      K+
Sbjct: 290 YQDNEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFS-PADCRKN 348

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
            +S          S N  + TL GCLD FTR E+LG DQK  CQ C  ++ES KQMSIR+
Sbjct: 349 RYS-------GGPSVNAIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRR 401

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD- 491
           LPL+ C H+KRFEH   RK SRK+D YLQ+P  L+M+PYLSSSI+  RFGNR F FDG+ 
Sbjct: 402 LPLLLCLHVKRFEHFLTRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEG 461

Query: 492 --ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAA 549
             +S++ + PS+EFE+FAVVTH G L++GHYVTYLRL   WY+CDDAWI EV E  VR  
Sbjct: 462 EYDSSSSSSPSAEFEIFAVVTHKGMLESGHYVTYLRLKGLWYRCDDAWINEVEEEVVRGC 521

Query: 550 QGYMMFYVQKMLYYKASEK 568
           + YM+FY Q+ +  KA ++
Sbjct: 522 ECYMLFYAQETVIQKAHKE 540


>gi|357478337|ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355510509|gb|AES91651.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 671

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/254 (81%), Positives = 228/254 (89%), Gaps = 3/254 (1%)

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           DCCIAHRVFSGILRSDVMCMACGFTSTT+DPCVD SLDLEPNQG S K ++  SN SC  
Sbjct: 421 DCCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPNQGGSTKMAAAASNPSCTG 480

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           EAD   SSQN GISTLMGCLDRFTR E+LGS+QKFFCQQC+V+QE+LKQMSIRKLPLVSC
Sbjct: 481 EAD---SSQNFGISTLMGCLDRFTRAEKLGSNQKFFCQQCKVKQETLKQMSIRKLPLVSC 537

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
           FHIKRFEHSS +KMSRKVDRYLQFP SLDM+PYLSSSILRSRFGNR FPFDGDE +  N+
Sbjct: 538 FHIKRFEHSSRKKMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFPFDGDEPDASND 597

Query: 499 PSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
             SEFELFAVVTH+GKLDAGHYVTYLRLSN+WYKCDD+W+T+V+EN VRAAQGYMMFYVQ
Sbjct: 598 LCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDSWVTQVDENIVRAAQGYMMFYVQ 657

Query: 559 KMLYYKASEKQGTS 572
           KMLYYKA++K   S
Sbjct: 658 KMLYYKATDKSVAS 671



 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/344 (61%), Positives = 247/344 (71%), Gaps = 47/344 (13%)

Query: 13  KTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDS 72
           K NGQI PQPCPHLA+F  R  TKPF ++ +CL IKPPGGRA++RRD  E+P C  CG S
Sbjct: 4   KINGQISPQPCPHLAEFR-RTSTKPFLSLHNCLRIKPPGGRASLRRDPHEIPHCNACGLS 62

Query: 73  SCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYD 132
           +  RLYAC++CAAVSCH           A   S +  H+IA+DVDRAELFCC CRDQVYD
Sbjct: 63  APSRLYACISCAAVSCHSSTVGVISHAAAHAASMSPGHQIAIDVDRAELFCCVCRDQVYD 122

Query: 133 RDFDAAVVLAHTTS-------------IIQSSKPENLRKRRRIDYRPWSPDLRERSLMVN 179
           RDFDAAVV+A T +             +  ++ PENLRKRRR+DYRP +PDLRER+L+ +
Sbjct: 123 RDFDAAVVIAQTVASTIGDVEKSTVIPMPSTTHPENLRKRRRVDYRPSTPDLRERALIGS 182

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +SPI+       D PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSD+HNRY+CQ 
Sbjct: 183 CSSPINV-----PDFPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDKHNRYFCQK 237

Query: 240 -----------------------KNGV---RLCLACDLDTMFSAIFCGDRMPYSPAKFLY 273
                                   NG+   RLCLACD+D MFSA+F GDR+PYSPAKFLY
Sbjct: 238 MSNADDAANGDDSAITTAKRNGDNNGIKNGRLCLACDMDAMFSAVFSGDRLPYSPAKFLY 297

Query: 274 SWWRHA--SNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           SWW+HA  SNLASYEQQDAHEFFISMLDGIHEKV+KD+HKP ++
Sbjct: 298 SWWQHAAKSNLASYEQQDAHEFFISMLDGIHEKVDKDRHKPHNE 341


>gi|296084529|emb|CBI25550.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/318 (64%), Positives = 225/318 (70%), Gaps = 48/318 (15%)

Query: 1   MSSKINHHHQNDKTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDS 60
           MSSKINHH    + NGQI PQPCPHLA++  RNG+KPFRA+Q+CL +KP G RAAIRRD 
Sbjct: 20  MSSKINHH----RINGQI-PQPCPHLAEYRTRNGSKPFRALQECLRVKPLG-RAAIRRDP 73

Query: 61  SEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAE 120
           SEVPRCG CG+++  RLYAC+ CAAVSCH     S     A   S    HEIAVDVDRAE
Sbjct: 74  SEVPRCGACGEAARSRLYACVTCAAVSCHSSDSPSPSHAAAHAVSMPPGHEIAVDVDRAE 133

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN 180
           LFCCACRDQVYDRDFDAA                NLRKRRR                   
Sbjct: 134 LFCCACRDQVYDRDFDAA----------------NLRKRRR------------------- 158

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
               D  + SN  LP GLRGLNNLGNTCFMNSVLQAL HTPPLRNYFLSDRHNR    S 
Sbjct: 159 --GADGANLSN--LPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNR---NSN 211

Query: 241 NGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
             +RLCLACD+D MFSA+F GDR PYSPAKFLYSWW+HA+NLASYEQQDAHEFFISMLDG
Sbjct: 212 KNLRLCLACDMDAMFSAVFSGDRTPYSPAKFLYSWWQHAANLASYEQQDAHEFFISMLDG 271

Query: 301 IHEKVEKDQHKPRSQGNG 318
           IHEK+ KD+ K +SQG G
Sbjct: 272 IHEKMGKDKRKTQSQGCG 289


>gi|348560267|ref|XP_003465935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cavia
           porcellus]
          Length = 525

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 209/551 (37%), Positives = 303/551 (54%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G    R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTTEARKRKAKSCVCHVCG-VHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLTYGGIYCFLCQDYIYDKDME- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   + +   K + I   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------IIAKEEQQKASKMQGIGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH   +C+ ++    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH---HCEMQSPSS-CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S      
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGS 348

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 349 VVNGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 402

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 403 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTD 455

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 456 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 514

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 515 LFYHKQFLEYE 525


>gi|348502347|ref|XP_003438729.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
           [Oreochromis niloticus]
          Length = 506

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/554 (37%), Positives = 301/554 (54%), Gaps = 59/554 (10%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  CPH+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++
Sbjct: 3   PAGCPHVNGFKVDNWKQNLRVIYQCF---VWSGSAETRKRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C   +C    H     IH    S    H +A+D+    ++C  C+D +YD++ +   
Sbjct: 59  CLYCVFFACFAKKH-----IHEHAKSK--RHNLAIDLLYGGIYCFMCQDYIYDKEME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     +SN  +
Sbjct: 109 ---------QIAKEEQ-RKAWKMQGIGEKYSTWEPTKRELELLRHN--PKRRRITSNCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D  K  +
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKAN 269

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
             N   CI  ++F+G L+SDV C AC   STT DP  D SLDL  +       S      
Sbjct: 270 NPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGS 329

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
           + N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 330 ALNGE------SHTTGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 383

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI---LRSRFGNRFFPFDGD 491
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS    +  ++     PF+ D
Sbjct: 384 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQTVDPFNND 441

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
                    +++ LFAVV H G L++GHY T++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 442 ---------NKYSLFAVVNHQGTLESGHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSE 492

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 493 GYLLFYHKQFLEYE 506


>gi|426349090|ref|XP_004042152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Gorilla
           gorilla gorilla]
          Length = 525

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 211/551 (38%), Positives = 304/551 (55%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL+ F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLSSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCICHVCG-VHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFLCQDYIYDKDME- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     +
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGN 348

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 349 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 402

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 403 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTD 455

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 456 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 514

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 515 LFYHKQFLEYE 525


>gi|150010639|ref|NP_056091.1| ubiquitin carboxyl-terminal hydrolase 22 [Homo sapiens]
 gi|78103328|sp|Q9UPT9.2|UBP22_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
           Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
           thioesterase 22; AltName:
           Full=Ubiquitin-specific-processing protease 22
 gi|307684440|dbj|BAJ20260.1| ubiquitin specific peptidase 22 [synthetic construct]
          Length = 525

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 211/551 (38%), Positives = 303/551 (54%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCICHVCG-VHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFLCQDYIYDKDME- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     +
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGN 348

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 349 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 402

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 403 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTD 455

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 456 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 514

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 515 LFYHKQFLEYE 525


>gi|410212034|gb|JAA03236.1| ubiquitin specific peptidase 22 [Pan troglodytes]
 gi|410262710|gb|JAA19321.1| ubiquitin specific peptidase 22 [Pan troglodytes]
 gi|410299182|gb|JAA28191.1| ubiquitin specific peptidase 22 [Pan troglodytes]
 gi|410356232|gb|JAA44523.1| ubiquitin specific peptidase 22 [Pan troglodytes]
          Length = 525

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 211/551 (38%), Positives = 303/551 (54%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCICHVCG-VHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFLCQDYIYDKDME- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     +
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGN 348

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 349 VVNGE------SHMSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 402

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 403 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTD 455

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 456 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 514

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 515 LFYHKQFLEYE 525


>gi|347361005|ref|NP_001178573.1| ubiquitin carboxyl-terminal hydrolase 22 [Rattus norvegicus]
          Length = 525

 Score =  351 bits (900), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 212/551 (38%), Positives = 297/551 (53%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVCG-IHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IHDHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDIE- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S      
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGS 348

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 349 VVNGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 402

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D     
Sbjct: 403 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLD----- 455

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 456 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 514

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 515 LFYHKQFLEYE 525


>gi|395856749|ref|XP_003800781.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 22 [Otolemur garnettii]
          Length = 725

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 210/551 (38%), Positives = 297/551 (53%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL+ F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 218 VAPPGCSHLSSFKVDNWKQNLRAIYQCFVWS---GTAEARKRKAKSCVCHVCG-VHLNRL 273

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 274 HSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDME- 325

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     ++N  + 
Sbjct: 326 ---------IIAKEEQRKAWKLQGVGEKFSTWEPTKRELELLKHN--PKRRKITANCTI- 373

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 374 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 428

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 429 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 488

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S      
Sbjct: 489 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGS 548

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 549 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 602

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D   S+
Sbjct: 603 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPVDSLSSD 660

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
                 +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 661 ------NKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 714

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 715 LFYHKQFLEYE 725


>gi|5689463|dbj|BAA83015.1| KIAA1063 protein [Homo sapiens]
          Length = 593

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 211/551 (38%), Positives = 302/551 (54%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 86  VAPPGCSHLGSFKVDNWKQNLRAIYQCFVW---SGTAEARKRKAKSCICHVCG-VHLNRL 141

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C       H+  HA     A  H +A+D+    ++C  C+D +YD+D + 
Sbjct: 142 HSCLYCVFFGCFT---KKHIHEHA----KAKRHNLAIDLMYGGIYCFLCQDYIYDKDME- 193

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 194 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 241

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 242 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 296

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 297 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 356

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     +
Sbjct: 357 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGN 416

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 417 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 470

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 471 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTD 523

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 524 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 582

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 583 LFYHKQFLEYE 593


>gi|301787135|ref|XP_002928982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
           [Ailuropoda melanoleuca]
          Length = 523

 Score =  350 bits (899), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 209/559 (37%), Positives = 306/559 (54%), Gaps = 47/559 (8%)

Query: 10  QNDKTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVC 69
           +++  + ++ P  C HL+ F   N  +  RAI  C       G A  R+  ++   C VC
Sbjct: 8   ESEAMDAELTPPGCSHLSSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVC 64

Query: 70  GDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQ 129
           G     RL++C+ C    C    H     IH    S    H +A+++    ++C  C+D 
Sbjct: 65  G-IHLNRLHSCLHCVFFGCFTKKH-----IHEHAKSK--RHRLAIELMYGGIYCFLCQDY 116

Query: 130 VYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSM 187
           +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P    
Sbjct: 117 IYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRK 164

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
            +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL
Sbjct: 165 ITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CL 218

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
            C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + 
Sbjct: 219 VCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKG 278

Query: 308 DQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
           D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +      
Sbjct: 279 DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWP 338

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
            S        N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES K
Sbjct: 339 LSPGSEGSVVNGE------SHVAGTTTLTDCLRRFTRPEHLGSGAKIKCSGCHSYQESTK 392

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           Q++++K+P+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++ 
Sbjct: 393 QLTMKKVPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQYQ 449

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENT 545
                 +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   
Sbjct: 450 QL----TDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIED 504

Query: 546 VRAAQGYMMFYVQKMLYYK 564
           V  ++GY++FY ++ L Y+
Sbjct: 505 VLDSEGYLLFYHKQFLEYE 523


>gi|110625685|ref|NP_001004143.2| ubiquitin carboxyl-terminal hydrolase 22 [Mus musculus]
 gi|78103329|sp|Q5DU02.2|UBP22_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
           Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
           thioesterase 22; AltName:
           Full=Ubiquitin-specific-processing protease 22
 gi|74196250|dbj|BAE33026.1| unnamed protein product [Mus musculus]
          Length = 525

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 212/549 (38%), Positives = 296/549 (53%), Gaps = 47/549 (8%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL++
Sbjct: 20  PPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVCG-IHLNRLHS 75

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 76  CLYCVFFGCFTKKH-----IHDHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDIE--- 125

Query: 140 VLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                  II   +     K + +   +  W P  RE  L+ +N  P     +SN  +  G
Sbjct: 126 -------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI--G 174

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F  
Sbjct: 175 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLFQE 230

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++   
Sbjct: 231 FYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP 290

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S        
Sbjct: 291 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVV 350

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
           N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V
Sbjct: 351 NGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIV 404

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
           +CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D     +L
Sbjct: 405 ACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLD-----SL 457

Query: 497 NEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMF 555
           N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++F
Sbjct: 458 NN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLF 516

Query: 556 YVQKMLYYK 564
           Y ++ L Y+
Sbjct: 517 YHKQFLEYE 525


>gi|410895865|ref|XP_003961420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Takifugu
           rubripes]
          Length = 506

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 213/555 (38%), Positives = 301/555 (54%), Gaps = 61/555 (10%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  CPH+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++
Sbjct: 3   PAGCPHVNSFKVDNWKQNLRVIYQCF---VWSGSAETRKRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C   +C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLHCVFFACFAKKH-----IHEHAKSK--RHNLAIDLLYGGIYCFMCQDYIYDKDME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     +SN  +
Sbjct: 109 ---------QIAKDEQ-RKAWKMQGIGEKYSTWEPTKRELELLRHN--PKRRRITSNCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    CQ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CQMQSDS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D  K  +
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKAN 269

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
             N   CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S    + 
Sbjct: 270 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSS 329

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
           + N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 330 ALNGE------SHATGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 383

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR----FFPFDG 490
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   +      PF+ 
Sbjct: 384 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQCQQIVDPFNN 440

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAA 549
           D         +++ LFAVV H G L++GHY T++R   ++W+KCDDA IT+ +   V  +
Sbjct: 441 D---------NKYSLFAVVNHQGTLESGHYTTFIRQHKDQWFKCDDAIITKASIKDVLDS 491

Query: 550 QGYMMFYVQKMLYYK 564
           +GY++FY ++ L Y+
Sbjct: 492 EGYLLFYHKQFLEYE 506


>gi|156388867|ref|XP_001634714.1| predicted protein [Nematostella vectensis]
 gi|156221800|gb|EDO42651.1| predicted protein [Nematostella vectensis]
          Length = 462

 Score =  350 bits (897), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 211/551 (38%), Positives = 289/551 (52%), Gaps = 103/551 (18%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL  F   NG K +R I    H      R A++R +S    C  CG  SC RL++C++
Sbjct: 4   CIHLNRFKKANGLKTYRKIHT--HFISCSSREALKRKASSC-FCHGCGTYSC-RLHSCLS 59

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+    S H+  HA  T     H +A+D++   ++C  C D  YD+DFD      
Sbjct: 60  CVYFGCYTG--SRHIQQHARTTG----HSLAIDLNHGTVYCFICGDYKYDKDFDNI---- 109

Query: 143 HTTSIIQSSKPENLRKRRRI-----DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                   ++ +  R  R++      + PW P   E  L + N   +    +S      G
Sbjct: 110 --------NRDQYRRAWRKLGNGCAKFLPWEPTKSEVKLFLENPKKVKITKNST----IG 157

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR+YFLSD+HN   C+   G   CL C++  +F  
Sbjct: 158 LRGLINLGNTCFMNCIVQALTHTPLLRDYFLSDQHN---CKGDAGT--CLVCEMGLLFQE 212

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD-----QHKP 312
            + G ++P+SP K L+  W HA +LA YEQQDAHEFFI+ LD +H   ++D       KP
Sbjct: 213 FYSGQKVPHSPFKLLHLVWTHARHLAGYEQQDAHEFFIAALDVLHNYCKEDAPDKLAVKP 272

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
            +    + CI  R+F+G L+SDV+C  C   STT DP  D SLDL               
Sbjct: 273 NNHNQCN-CIIDRIFTGGLQSDVICQTCNCVSTTVDPFWDISLDL------------GHG 319

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
           +H                   ++ C  RFTRPE LGS+ K  C +CQ  QES KQ+S+RK
Sbjct: 320 DH-----------------KLVIFC--RFTRPESLGSESKIKCNKCQSYQESTKQLSMRK 360

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           LP+V CFH+KRFEHS   K S+K+  Y+ FP  LDMAP+L                    
Sbjct: 361 LPIVVCFHLKRFEHS---KKSKKISTYIPFPQELDMAPFL-------------------- 397

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
                  SS++ LFAVV H+G L+ GHY  ++R  N W+KCDDAWIT+   + V  ++GY
Sbjct: 398 -------SSKYSLFAVVNHSGTLEVGHYTAFIRQQNNWFKCDDAWITKATIDDVLQSEGY 450

Query: 553 MMFYVQKMLYY 563
           ++FY + +L Y
Sbjct: 451 LLFYHRVVLDY 461


>gi|402899046|ref|XP_003912516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Papio anubis]
          Length = 525

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 211/554 (38%), Positives = 300/554 (54%), Gaps = 53/554 (9%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCICHVCG-VHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDMEI 126

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                           E  RK  ++      +  W P  RE  L+ +N  P     +SN 
Sbjct: 127 IA-------------KEEQRKAWKMQGAGEKFSTWEPTKRELELLKHN--PKRRKITSNC 171

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
            +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ 
Sbjct: 172 TI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMS 225

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  
Sbjct: 226 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGK 285

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S   
Sbjct: 286 KANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
             +  N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++
Sbjct: 346 EGNVVNGE------SHMSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMK 399

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++      
Sbjct: 400 KLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQ 452

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
            +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 453 PTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSE 511

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 512 GYLLFYHKQFLEYE 525


>gi|380784219|gb|AFE63985.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
 gi|380784221|gb|AFE63986.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
 gi|383416981|gb|AFH31704.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
 gi|383416983|gb|AFH31705.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
 gi|384939714|gb|AFI33462.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
 gi|384939716|gb|AFI33463.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
          Length = 525

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 211/554 (38%), Positives = 300/554 (54%), Gaps = 53/554 (9%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCICHVCG-VHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDMEI 126

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                           E  RK  ++      +  W P  RE  L+ +N  P     +SN 
Sbjct: 127 IA-------------KEEQRKAWKMQGAGEKFSTWEPTKRELELLKHN--PKRRKITSNC 171

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
            +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ 
Sbjct: 172 TI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMS 225

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  
Sbjct: 226 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGK 285

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S   
Sbjct: 286 KANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
             +  N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++
Sbjct: 346 EGNVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMK 399

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++      
Sbjct: 400 KLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQ 452

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
            +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 453 PTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSE 511

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 512 GYLLFYHKQFLEYE 525


>gi|395748703|ref|XP_002827183.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pongo abelii]
          Length = 746

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 211/551 (38%), Positives = 301/551 (54%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 239 VAPPGCSHLGSFKVDNWKQNLRAIYQCFVWS---GTAEARKRKAKSCICHVCG-VHLNRL 294

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 295 HSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDME- 346

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 347 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 394

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 395 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 449

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 450 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 509

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     +
Sbjct: 510 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGN 569

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 570 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 623

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 624 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSK-ESRMNGQY----QQPTD 676

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 677 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 735

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 736 LFYHKQFLEYE 746


>gi|431914524|gb|ELK15774.1| Ubiquitin carboxyl-terminal hydrolase 22 [Pteropus alecto]
          Length = 525

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 210/551 (38%), Positives = 301/551 (54%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL+ F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VTPPGCSHLSSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVCG-IHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+++    ++C  C+D +YD+D + 
Sbjct: 74  HSCLHCVFFGCFTKKH-----IHEHAKSK--RHNLAIELMYGGIYCFLCQDYIYDKDME- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S      
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGS 348

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 349 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 402

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 403 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPAD 455

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 456 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYL 514

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 515 LFYHKQFLEYE 525


>gi|60360058|dbj|BAD90248.1| mKIAA1063 protein [Mus musculus]
          Length = 570

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 212/549 (38%), Positives = 296/549 (53%), Gaps = 47/549 (8%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL++
Sbjct: 65  PPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVCG-IHLNRLHS 120

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 121 CLYCVFFGCFTKKH-----IHDHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDIE--- 170

Query: 140 VLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                  II   +     K + +   +  W P  RE  L+ +N  P     +SN  +  G
Sbjct: 171 -------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI--G 219

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F  
Sbjct: 220 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLFQE 275

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++   
Sbjct: 276 FYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP 335

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S        
Sbjct: 336 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVV 395

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
           N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V
Sbjct: 396 NGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIV 449

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
           +CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D     +L
Sbjct: 450 ACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLD-----SL 502

Query: 497 NEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMF 555
           N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++F
Sbjct: 503 NN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLF 561

Query: 556 YVQKMLYYK 564
           Y ++ L Y+
Sbjct: 562 YHKQFLEYE 570


>gi|390481017|ref|XP_003736056.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 22-like [Callithrix jacchus]
          Length = 697

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 212/554 (38%), Positives = 302/554 (54%), Gaps = 53/554 (9%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 190 VAPPGCSHLGSFKVDNWKQNLRAIYQCFVWS---GTAEARKRKAKSCICHVCG-VHLNRL 245

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D + 
Sbjct: 246 HSCLYCVFFGCFT---KKHIHEHAKSKR----HNLAIDLMYGGIYCFLCQDYIYDKDME- 297

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                    II     E  RK  ++      +  W P  RE  L+ +N  P     +SN 
Sbjct: 298 ---------IIAK---EEQRKAWKMQGAGEKFSTWEPTKRELELLKHN--PKRRKITSNC 343

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
            +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ 
Sbjct: 344 TI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMS 397

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  
Sbjct: 398 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGK 457

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S   
Sbjct: 458 KANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 517

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
             +  N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++
Sbjct: 518 EGNVVNGE------SHMAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMK 571

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++      
Sbjct: 572 KLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSK-ESRMNGQY----QQ 624

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
            +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 625 PTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSE 683

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 684 GYLLFYHKQFLEYE 697


>gi|74145360|dbj|BAE36137.1| unnamed protein product [Mus musculus]
          Length = 525

 Score =  349 bits (895), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 212/549 (38%), Positives = 295/549 (53%), Gaps = 47/549 (8%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL++
Sbjct: 20  PPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVCG-IHLNRLHS 75

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C  C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 76  CHYCVFFGCFTKKH-----IHDHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDIE--- 125

Query: 140 VLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                  II   +     K + +   +  W P  RE  L+ +N  P     +SN  +  G
Sbjct: 126 -------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI--G 174

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F  
Sbjct: 175 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLFQE 230

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++   
Sbjct: 231 FYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP 290

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S        
Sbjct: 291 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVV 350

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
           N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V
Sbjct: 351 NGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIV 404

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
           +CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D     +L
Sbjct: 405 ACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLD-----SL 457

Query: 497 NEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMF 555
           N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++F
Sbjct: 458 NN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLF 516

Query: 556 YVQKMLYYK 564
           Y ++ L Y+
Sbjct: 517 YHKQFLEYE 525


>gi|262118284|ref|NP_001160039.1| ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
 gi|229558005|sp|P0C8Z3.1|UBP22_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
           Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
           thioesterase 22; AltName:
           Full=Ubiquitin-specific-processing protease 22
 gi|296476572|tpg|DAA18687.1| TPA: ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
          Length = 514

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 210/551 (38%), Positives = 301/551 (54%), Gaps = 47/551 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 7   VTPPGCAHLGSFKVDNWKQNLRAIYQCF---VWSGSAEARKRKAKSCVCHVCG-LHLNRL 62

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+++    ++C  C+D +YD+D + 
Sbjct: 63  HSCLHCVFFGCFTKKH-----IHEHAKSK--RHNLAIELMYGGIYCFLCQDYIYDKDIE- 114

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    II   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 115 ---------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 162

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 163 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 217

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 218 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 277

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S    + 
Sbjct: 278 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESS 337

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 338 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 391

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 392 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTD 444

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 445 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIADVLDSEGYL 503

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 504 LFYHKQFLEYE 514


>gi|51593607|gb|AAH80737.1| Ubiquitin specific peptidase 22 [Mus musculus]
          Length = 525

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 211/549 (38%), Positives = 296/549 (53%), Gaps = 47/549 (8%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL++
Sbjct: 20  PPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVCG-IHLNRLHS 75

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 76  CLYCVFFGCFTKKH-----IHDHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDIE--- 125

Query: 140 VLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                  II   +     K + +   +  W P  RE  L+ +N  P     +SN  +  G
Sbjct: 126 -------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI--G 174

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFM+ ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F  
Sbjct: 175 LRGLINLGNTCFMDCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLFQE 230

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++   
Sbjct: 231 FYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP 290

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S        
Sbjct: 291 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVV 350

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
           N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V
Sbjct: 351 NGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIV 404

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
           +CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D     +L
Sbjct: 405 ACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLD-----SL 457

Query: 497 NEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMF 555
           N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++F
Sbjct: 458 NN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLF 516

Query: 556 YVQKMLYYK 564
           Y ++ L Y+
Sbjct: 517 YHKQFLEYE 525


>gi|119623000|gb|EAX02595.1| hCG28655 [Homo sapiens]
          Length = 556

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 209/544 (38%), Positives = 300/544 (55%), Gaps = 47/544 (8%)

Query: 25  HLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMACA 84
           HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL++C+ C 
Sbjct: 56  HLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCICHVCG-VHLNRLHSCLYCV 111

Query: 85  AVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHT 144
              C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D +        
Sbjct: 112 FFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFLCQDYIYDKDME-------- 156

Query: 145 TSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
             II   +     K + +   +  W P  RE  L+ +N  P     +SN  +  GLRGL 
Sbjct: 157 --IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI--GLRGLI 210

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F   + G 
Sbjct: 211 NLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLFQEFYSGH 266

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-C 321
           R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++     C C
Sbjct: 267 RSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNC 326

Query: 322 IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEAD 381
           I  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     +  N E  
Sbjct: 327 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGE-- 384

Query: 382 GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHI 441
               S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+
Sbjct: 385 ----SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHL 440

Query: 442 KRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       +++LN   +
Sbjct: 441 KRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTDSLNN-DN 492

Query: 502 EFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKM 560
           ++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY ++ 
Sbjct: 493 KYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQF 552

Query: 561 LYYK 564
           L Y+
Sbjct: 553 LEYE 556


>gi|417402329|gb|JAA48015.1| Putative ubiquitin carboxyl-terminal hydrolase 22 [Desmodus
           rotundus]
          Length = 525

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 210/552 (38%), Positives = 302/552 (54%), Gaps = 49/552 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL+ F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VTPPGCTHLSSFKVDNWKQNLRAIYQCF---VWCGTAEARKRKAKSCICHVCG-VHLKRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+++    ++C  C+D +YD+D + 
Sbjct: 74  HSCLHCVFFGCFTKKH-----IHEHAKSK--RHNLAIELMYGGIYCFLCQDYIYDKDME- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    +I   + +   K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------MIAKEERQRAGKMQGVGEKFSTWEPSKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL P   +     S  S  
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL-PGSSTPFWPLSPGS-- 345

Query: 375 SCNCEADGMNS-SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
               E   +N  S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KL
Sbjct: 346 ----EGSVVNGDSHMSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKL 401

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
           P+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D   +
Sbjct: 402 PIVACFHLKRFEHSA--KLRRKITTYVSFPLVLDMTPFMASSKESRMNGQYQQPADSLSN 459

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGY 552
           +      +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY
Sbjct: 460 D------NKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGY 513

Query: 553 MMFYVQKMLYYK 564
           ++FY +++L Y+
Sbjct: 514 LLFYHKQVLEYE 525


>gi|327283671|ref|XP_003226564.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
           2 [Anolis carolinensis]
          Length = 510

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 209/549 (38%), Positives = 306/549 (55%), Gaps = 53/549 (9%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++C+ 
Sbjct: 8   CCHVTGFKVENWKQNLRVIYQCF---VWSGSAEARKRKAKSCICHMCG-AHLNRLHSCLY 63

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D +      
Sbjct: 64  CVFFGCFTKKH-----IH--EHAKAKRHNLAIDLLYGGIYCFMCQDYIYDKDME------ 110

Query: 143 HTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                 Q +K E  RK  ++      Y  W P  RE  L+ +N  P     ++N  +  G
Sbjct: 111 ------QIAKEEQ-RKAWKLQGIGEKYSTWEPTKRELELLRHN--PKRRKITTNCTI--G 159

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++ T+F  
Sbjct: 160 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSPSS-CLVCEMSTLFQE 215

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++   
Sbjct: 216 FYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP 275

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             C CI  ++F+G L+SDV C  C   STT DP  D SLDL P   +     S  S+ S 
Sbjct: 276 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL-PGSSTPFWPLSPGSDGSV 334

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
               +G   S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V
Sbjct: 335 ---VNG--ESHVTGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIV 389

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
           +CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       +++L
Sbjct: 390 ACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPADSL 442

Query: 497 NEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMF 555
           N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++F
Sbjct: 443 NN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLF 501

Query: 556 YVQKMLYYK 564
           Y ++ L Y+
Sbjct: 502 YHKQFLEYE 510


>gi|229558006|sp|A6H8I0.1|UBP22_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
           Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
           thioesterase 22; AltName:
           Full=Ubiquitin-specific-processing protease 22
 gi|148921505|gb|AAI46619.1| Usp22 protein [Danio rerio]
          Length = 506

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 210/551 (38%), Positives = 300/551 (54%), Gaps = 53/551 (9%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGFKVDNWKQNLRVIYQCF---VWSGSAETRKRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLHCVFFGCFS---KKHIHEHAKNKR----HNLAIDLLYGGIYCFVCQDYIYDKDME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     ++N  +
Sbjct: 109 ---------QIAKEEQ-RKAWKLQGIGEKYSMWEPTKRELELLRHN--PKRRKITANCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D  K  +
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKAN 269

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
             N   CI  ++F+G L+SDV C  C   STT DP  D SLDL P   +     S  S+ 
Sbjct: 270 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL-PGSSTPFWPLSPGSDG 328

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
           S     +G   S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ+++++LP
Sbjct: 329 SV---VNG--DSHPSGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLP 383

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D     
Sbjct: 384 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPVD----- 436

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYM 553
           +LN   +++ LFAVV H G L++GHY T++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 437 SLNN-DNKYSLFAVVNHQGTLESGHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYL 495

Query: 554 MFYVQKMLYYK 564
           +FY ++ L Y+
Sbjct: 496 LFYHKQFLEYE 506


>gi|327283669|ref|XP_003226563.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
           1 [Anolis carolinensis]
          Length = 525

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 207/553 (37%), Positives = 307/553 (55%), Gaps = 46/553 (8%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++C+ 
Sbjct: 8   CCHVTGFKVENWKQNLRVIYQCF---VWSGSAEARKRKAKSCICHMCG-AHLNRLHSCLY 63

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD------ 136
           C    C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D +      
Sbjct: 64  CVFFGCFTKKH-----IH--EHAKAKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEE 116

Query: 137 ---AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD 193
              A  + A T +++   +        +  Y  W P  RE  L+ +N  P     ++N  
Sbjct: 117 QRKAWKLQAFTPTMVSHYQCTMTGIGEK--YSTWEPTKRELELLRHN--PKRRKITTNCT 172

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++ T
Sbjct: 173 I--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSPSS-CLVCEMST 226

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
           +F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  +
Sbjct: 227 LFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKK 286

Query: 314 SQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
           +     C CI  ++F+G L+SDV C  C   STT DP  D SLDL P   +     S  S
Sbjct: 287 ANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL-PGSSTPFWPLSPGS 345

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
           + S     +G   S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++K
Sbjct: 346 DGSV---VNG--ESHVTGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKK 400

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           LP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       
Sbjct: 401 LPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQP 453

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQG 551
           +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++G
Sbjct: 454 ADSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEG 512

Query: 552 YMMFYVQKMLYYK 564
           Y++FY ++ L Y+
Sbjct: 513 YLLFYHKQFLEYE 525


>gi|330793624|ref|XP_003284883.1| hypothetical protein DICPUDRAFT_86473 [Dictyostelium purpureum]
 gi|325085192|gb|EGC38604.1| hypothetical protein DICPUDRAFT_86473 [Dictyostelium purpureum]
          Length = 650

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 216/646 (33%), Positives = 322/646 (49%), Gaps = 138/646 (21%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLH-IKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           C H+ D+    G+  F  +Q+ ++ IK       +       P C  CG S   R++ C+
Sbjct: 36  CKHIIDYKDNGGSNRFNIVQNYIYSIK----MKLLDTTQLPTPYCLECG-SFNGRIHICL 90

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA--- 138
            C   SC     + H+  H  + +    H +AVD +  +++C  CRD +YD++F+     
Sbjct: 91  HCVHASC---WKAGHIQQHFNENNG---HFLAVDFNLNQIYCHHCRDYIYDKEFEEIREN 144

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGL 198
           V L  T ++     P      +RI Y+ W P   E   +  N+  ID    SN  +  GL
Sbjct: 145 VKLNITINLQDVKNPST----KRIKYKSWKPSDEEFQFIKQNSDIIDY---SNPII--GL 195

Query: 199 RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK------------------ 240
           RGLNNLGNTCFMNS+LQ+  H P LRNYFLSD H    C+ K                  
Sbjct: 196 RGLNNLGNTCFMNSILQSYIHNPLLRNYFLSDMHK---CEKKKNLNNYNYNYNNNNNNNN 252

Query: 241 ---------NGV------------------------------RLCLACDLDTMFSAIFCG 261
                    NG+                              ++CL C++D +++ IF G
Sbjct: 253 VNSNSNLVENGIHIKQEPIDSDEQSQQNNNNNNNSLYENNNSKICLGCEMDKLYTQIFSG 312

Query: 262 DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCC 321
            ++P++P  FLYS W ++S    YEQQDAHEFFIS L+GIH       H   + G    C
Sbjct: 313 LKIPFTPHHFLYSCWNYSSYFVGYEQQDAHEFFISSLNGIH------SHCGGTTGKDCNC 366

Query: 322 IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE-----PNQGSSMKTSSTKSNHSC 376
           I H  F G L+S+V C+ C FTS+T DP +D SLD+       N   S KT+ TKS+ + 
Sbjct: 367 IVHCTFGGSLKSEVACLHCQFTSSTSDPFIDISLDIPKSRDLANGNGSAKTTPTKSDANN 426

Query: 377 NCEADGMNSSQNCGI-----------STLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
           + + +  N     GI           +TL+ CL+RFT+PE+L  D+K+FC+ C  +QES 
Sbjct: 427 DDDNNSENLENGNGIISGNGYHHHQGNTLLACLERFTQPEKL--DEKYFCRNCNCKQEST 484

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ+S   LP+V CFH+KRFE S   + + K+D +++FP+++DM PY  ++I R +   + 
Sbjct: 485 KQLSFDILPVVICFHLKRFEQSKSNRRTHKIDTFIEFPITIDMTPY--TTIARKKNKLKL 542

Query: 486 FPFDGDE--------------------------SNTLNEPSSEF--ELFAVVTHTGKLDA 517
              + +E                              +E  S F  ELFAVV HTGK+D+
Sbjct: 543 QKQETEELNKNNNSSDNDNNNNNNNEESNNSKKRKNRDESDSSFIYELFAVVNHTGKIDS 602

Query: 518 GHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYY 563
           GHY  +++  + WYKCDD+ I+    + V  ++GY+++Y++K L Y
Sbjct: 603 GHYTCFVKHHDNWYKCDDSMISSTTIHNVLKSKGYLLYYLKKQLEY 648


>gi|148230765|ref|NP_001085912.1| ubiquitin carboxyl-terminal hydrolase 22-A [Xenopus laevis]
 gi|82184225|sp|Q6GNI6.1|UB22A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-A; AltName:
           Full=Deubiquitinating enzyme 22-A; AltName:
           Full=Ubiquitin thioesterase 22-A; AltName:
           Full=Ubiquitin-specific-processing protease 22-A
 gi|49115779|gb|AAH73524.1| MGC82781 protein [Xenopus laevis]
          Length = 523

 Score =  340 bits (873), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 205/554 (37%), Positives = 298/554 (53%), Gaps = 42/554 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G    R+  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNSFKVENWKQNLRVIYQCF---VWSGTPETRKRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLYCVFFGCFT---KKHIHEHAKNKR----HNLAIDLLYGGIYCFMCQDYIYDKDMEQVA 111

Query: 140 VLAHTTSI-IQSSKPENLRKRRRI------DYRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                 +  +Q   P  +   +         Y  W P  RE  L+ +N  P     ++N 
Sbjct: 112 KEEQRKAWKLQVFSPALVSPYQYTMTGVGEKYSTWEPTKRELELLQHN--PKRRKITTNC 169

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
            +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH +   QS N    CL C++ 
Sbjct: 170 TI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-KCEMQSPNS---CLVCEMS 223

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  
Sbjct: 224 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGK 283

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S   
Sbjct: 284 KANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 343

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
                N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++
Sbjct: 344 DAGVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMK 397

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++      
Sbjct: 398 KLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQ 450

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
            S++L+   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 451 PSDSLHN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSE 509

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 510 GYLLFYHKQFLEYE 523


>gi|334333006|ref|XP_001370855.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
           [Monodelphis domestica]
          Length = 880

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 206/556 (37%), Positives = 303/556 (54%), Gaps = 46/556 (8%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G    R+  ++   C +CG +   RL++
Sbjct: 360 PAGCSHVNSFKVENWRQNLRVIYQCFVW---SGTPETRKRKAKSCICHMCG-AHLNRLHS 415

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD--- 136
           C+ C    C       H+  HA KT     H +A+D+    ++C  C+D +YD+D +   
Sbjct: 416 CLYCVFFGCFT---KKHIHEHA-KTKR---HNLAIDLLYGGIYCFMCQDYIYDKDMEQIA 468

Query: 137 ------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
                 A  + A T +++   +        +  Y  W P  RE  L+ +N  P     ++
Sbjct: 469 KEEQRKAWKLQAFTPTVVSHYQCTMTGIGEK--YSTWEPTKRELELLRHN--PKRRKITT 524

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACD 250
           N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C+
Sbjct: 525 NCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSPSS-CLVCE 578

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
           + T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +
Sbjct: 579 MSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDN 638

Query: 311 KPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
             ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S 
Sbjct: 639 GKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSP 698

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                  N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++
Sbjct: 699 GSDGSVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLT 752

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           ++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++    
Sbjct: 753 MKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY---- 805

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRA 548
              +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  
Sbjct: 806 QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLD 864

Query: 549 AQGYMMFYVQKMLYYK 564
           ++GY++FY ++ L Y+
Sbjct: 865 SEGYLLFYHKQFLEYE 880


>gi|410902432|ref|XP_003964698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
           2 [Takifugu rubripes]
          Length = 511

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 206/556 (37%), Positives = 299/556 (53%), Gaps = 58/556 (10%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  +   N  +  R I  C       G A  RR  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGYKVDNWKQNLRVIYQCF---VWTGTAETRRRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLLYGGIYCFVCQDYIYDKDME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     ++N  +
Sbjct: 109 ---------QIAKEEQ-RKAWKLQGIGEKYTTWEPTKRELELLRHN--PKRRKITTNCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH-----EKVEKDQ 309
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H     + +  D 
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTIRDDN 269

Query: 310 HKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
            K  +  N   CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S 
Sbjct: 270 GKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSP 329

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                + N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++
Sbjct: 330 GGDGGTMNGE------SHLSGSTTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLT 383

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           ++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++    
Sbjct: 384 LKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY---- 436

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRA 548
             ++  +    +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  
Sbjct: 437 -QQTVEVLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLD 495

Query: 549 AQGYMMFYVQKMLYYK 564
           ++GY++FY ++ L Y+
Sbjct: 496 SEGYLLFYHKQFLEYE 511


>gi|238477375|sp|Q6DCJ1.2|UB22B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-B; AltName:
           Full=Deubiquitinating enzyme 22-B; AltName:
           Full=Ubiquitin thioesterase 22-B; AltName:
           Full=Ubiquitin-specific-processing protease 22-B
          Length = 523

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 205/554 (37%), Positives = 298/554 (53%), Gaps = 42/554 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G    R+  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNSFKVENWRQNLRVIYQCF---VWSGTPETRKRKAKSCVCHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLYCVYFGCFT---KKHIHEHAKNKR----HNLAIDLLYGGIYCFMCQDYIYDKDMEQVA 111

Query: 140 VLAHTTSI-IQSSKPENLRKRRRI------DYRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                 +  +Q   P  +   +         Y  W P  RE  L+ +N  P     ++N 
Sbjct: 112 KEEQRKAWKLQVFSPALVSPYQYTMTGVGEKYSTWEPTKRELELLQHN--PKRRKITTNC 169

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
            +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH +   QS N    CL C++ 
Sbjct: 170 TI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-KCEMQSPNS---CLVCEMS 223

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  
Sbjct: 224 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGK 283

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S   
Sbjct: 284 KANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 343

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
                N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++
Sbjct: 344 DAGVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMK 397

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++      
Sbjct: 398 KLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMMPFMASS-KESRMNGQY----QQ 450

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
            S++L+   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 451 PSDSLHN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVIDSE 509

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 510 GYLLFYHKQFLEYE 523


>gi|147904969|ref|NP_001090240.1| ubiquitin carboxyl-terminal hydrolase 22-B [Xenopus laevis]
 gi|50418363|gb|AAH78033.1| Usp27x protein [Xenopus laevis]
          Length = 572

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 205/554 (37%), Positives = 298/554 (53%), Gaps = 42/554 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G    R+  ++   C +CG +   RL++
Sbjct: 52  PAGCSHVNSFKVENWRQNLRVIYQCF---VWSGTPETRKRKAKSCVCHMCG-AHLNRLHS 107

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D +   
Sbjct: 108 CLYCVYFGCFT---KKHIHEHAKNKR----HNLAIDLLYGGIYCFMCQDYIYDKDMEQVA 160

Query: 140 VLAHTTSI-IQSSKPENLRKRRRI------DYRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                 +  +Q   P  +   +         Y  W P  RE  L+ +N  P     ++N 
Sbjct: 161 KEEQRKAWKLQVFSPALVSPYQYTMTGVGEKYSTWEPTKRELELLQHN--PKRRKITTNC 218

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
            +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH +   QS N    CL C++ 
Sbjct: 219 TI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-KCEMQSPNS---CLVCEMS 272

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  
Sbjct: 273 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGK 332

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S   
Sbjct: 333 KANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 392

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
                N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++
Sbjct: 393 DAGVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMK 446

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++      
Sbjct: 447 KLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMMPFMASS-KESRMNGQY----QQ 499

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
            S++L+   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 500 PSDSLHN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVIDSE 558

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 559 GYLLFYHKQFLEYE 572


>gi|320163839|gb|EFW40738.1| ubiquitin carboxyl-terminal hydrolase [Capsaspora owczarzaki ATCC
           30864]
          Length = 655

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 200/560 (35%), Positives = 290/560 (51%), Gaps = 100/560 (17%)

Query: 63  VPRCGVCGDSSCPRLYACMACAAVSCHVPPH----------------SSHVAI---HATK 103
            P C VC  +   +L+AC++C    C    +                +S  A+   HA  
Sbjct: 140 TPACSVC-RAPGRKLHACLSCTFFGCRAKLNHNASNGTTATMMDTSMTSTTALPLSHAEA 198

Query: 104 TSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLR----KR 159
            +  C H +A DV   +++C  C+D VYD + D          II+  + E  R    + 
Sbjct: 199 HARQCGHPLACDVVHDQIYCFECQDYVYDHEMD---------DIIEHQRVEAERAAYAET 249

Query: 160 RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
            R+ Y PW P   E  L+  +A  + +++    D   GLRGLNNLGNTCFMN +LQ+  H
Sbjct: 250 NRLPYLPWVPKAEEARLI--SAHSVANVTDPE-DSTLGLRGLNNLGNTCFMNCILQSFIH 306

Query: 220 TPPLRNYFLSDRHNRYYCQ-----------SKNGVR----------------LCLACDLD 252
            P LRNYFL+D+H    C            +  GV+                LC+AC++D
Sbjct: 307 NPLLRNYFLADQHTEETCHIQLGKGLPPVDTAKGVQPHNHHHHHHHQSGSDSLCMACEMD 366

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +    F G+  P++P +FL+S W+HA +LA YEQQDAHEFFI+ LD +H          
Sbjct: 367 QLLHRFFSGETQPHTPYQFLHSVWKHAKHLAGYEQQDAHEFFIATLDAMHTHC------- 419

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
           R       CI HRVF+G L+SD+ C+ CG  S+T DP  D SLDL  ++G++      + 
Sbjct: 420 RGTLLNCHCIIHRVFTGALQSDLTCLRCGSVSSTVDPFWDISLDLRHHKGATGTPEELQP 479

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
           N                   +L  CL RF RPERL   ++  C  C+  Q+ +KQ++I+ 
Sbjct: 480 N-------------------SLEQCLHRFIRPERL--TEQISCGNCKTHQDCIKQLTIKS 518

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           LP+V C H+KRFEH++    S K+D Y++FP  LDM+PYLS+S+ R        P    E
Sbjct: 519 LPVVVCCHLKRFEHAT---RSFKIDSYIEFPAHLDMSPYLSASLQRQNGNIPVVPPSPRE 575

Query: 493 SNTLNEPSSEF------ELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
              +   S +F       LFAVV H G +D GHY  Y+R +++W+ CDDAWIT+V+   V
Sbjct: 576 EAPILNASPDFGGNAMYSLFAVVNHRGSIDHGHYTCYVRHNSRWFLCDDAWITQVDIEEV 635

Query: 547 RAAQGYMMFYVQKMLYYKAS 566
           R +QGY++FY++  + Y A+
Sbjct: 636 RESQGYLLFYIKDEMEYSAN 655


>gi|344292651|ref|XP_003418039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
           [Loxodonta africana]
          Length = 914

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 219/565 (38%), Positives = 304/565 (53%), Gaps = 54/565 (9%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 380 VGPPSCSHVNSFKVGENWRQELRLIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 435

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 436 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 488

Query: 137 A--------AVVLAHTTSI----IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
                    A+ L  +TS      Q SKP    K     Y  W     E  L+ +N    
Sbjct: 489 KIAKEEQGEALKLQASTSTEVSHQQCSKPGIGEK-----YPTWETTKPELELLGHNPRRR 543

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
              SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   
Sbjct: 544 RITSS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PE 595

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
           LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H  
Sbjct: 596 LCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRH 655

Query: 305 VEKDQ-HKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
            + D   K  S  N   CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +
Sbjct: 656 CKGDDVGKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCT 714

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           S    S     S N E      S   GI+TL  CL RFTRPE LGS+ K  C  CQ  QE
Sbjct: 715 SFWPVSPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSNAKIKCGSCQSYQE 768

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           S KQ+++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G 
Sbjct: 769 STKQLTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQ 826

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVN 542
              P     S+  NE  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +
Sbjct: 827 LQLP----TSSGNNE--NKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKAS 880

Query: 543 ENTVRAAQGYMMFYVQKMLYYKASE 567
              V  ++GY++FY +++L +++ +
Sbjct: 881 IKDVLDSEGYLLFYHKQVLEHESEK 905


>gi|327412316|ref|NP_001192175.1| ubiquitin specific peptidase 22 [Xenopus (Silurana) tropicalis]
          Length = 572

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 204/554 (36%), Positives = 299/554 (53%), Gaps = 42/554 (7%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G    R+  ++   C +CG +   RL++
Sbjct: 52  PAGCSHVNSFKVENWKQNLRVIYQCF---VWSGTPETRKRKAKSCICHMCG-AHLNRLHS 107

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D +   
Sbjct: 108 CLYCVFFGCFT---KKHIHEHAKNKR----HNLAIDLLYGGIYCFMCQDYIYDKDMEQVA 160

Query: 140 VLAHTTSI-IQSSKPENLRKRRRI------DYRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                 +  +Q+  P  +   +         Y  W P  RE  L+ +N  P     ++N 
Sbjct: 161 KEEQRKAWKLQAFSPALVSPYQYAMTGVGEKYSTWEPTKRELELLQHN--PKRRKITTNC 218

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
            +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH +   QS N    CL C++ 
Sbjct: 219 TI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-KCEMQSPNS---CLVCEMS 272

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  
Sbjct: 273 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGK 332

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S   
Sbjct: 333 KANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 392

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
            +   N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++
Sbjct: 393 DSAVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMK 446

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FP  LDM P+++SS   SR   ++      
Sbjct: 447 KLPIVACFHLKRFEHSA--KLRRKITTYVSFPWELDMTPFMASS-KESRMNGQY----QQ 499

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQ 550
            S++L+   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++
Sbjct: 500 PSDSLHN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSE 558

Query: 551 GYMMFYVQKMLYYK 564
           GY++FY ++ L Y+
Sbjct: 559 GYLLFYHKQFLEYE 572


>gi|348525308|ref|XP_003450164.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
           [Oreochromis niloticus]
          Length = 510

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 206/555 (37%), Positives = 298/555 (53%), Gaps = 57/555 (10%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  +   N  +  R I  C       G A  RR  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGYKVDNWKQNLRVIYQCF---VWSGTAETRRRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLYCVFFGCFT---KKHIHEHAKNKR----HNLAIDLLYGGIYCFVCQDYIYDKDME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     ++N  +
Sbjct: 109 ---------QIAKEEQ-RKAWKLQGIGEKYTTWEPTKRELELLRHN--PKRRKITTNCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE----KDQH 310
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   +     D  
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNG 269

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
           K  +  N   CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S  
Sbjct: 270 KKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPG 329

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
               + N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ+++
Sbjct: 330 GDGSTVNGE------SHLSGSTTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTM 383

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
           +KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++     
Sbjct: 384 KKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----- 435

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAA 549
            +S  +    +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  +
Sbjct: 436 QQSVDVLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDS 495

Query: 550 QGYMMFYVQKMLYYK 564
           +GY++FY ++ L Y+
Sbjct: 496 EGYLLFYHKQFLEYE 510


>gi|426258083|ref|XP_004022649.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
           [Ovis aries]
          Length = 557

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 213/561 (37%), Positives = 302/561 (53%), Gaps = 46/561 (8%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 23  VGPPGCSHVNSFKVGENWRQELRVIYQCF---VWCGTPETRKSKAKSCICHVCG-THLNR 78

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYDRD +
Sbjct: 79  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDRDIE 131

Query: 137 --------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMS 188
                    A+ L  +TS   S +  ++       Y  W     E  L+ +N       S
Sbjct: 132 QIAKEEQGEALKLQASTSTEVSHQQYSMPGLGE-KYPTWETTKPELELLGHNPRRRRIAS 190

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           S       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL 
Sbjct: 191 S----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLV 242

Query: 249 CDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD 308
           C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D
Sbjct: 243 CEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGD 302

Query: 309 QHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
                +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S   
Sbjct: 303 DAGKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWP 361

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ
Sbjct: 362 MSPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 415

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           +++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P
Sbjct: 416 LTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP 473

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTV 546
                +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V
Sbjct: 474 -----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDV 527

Query: 547 RAAQGYMMFYVQKMLYYKASE 567
             ++GY++FY +++L +++ +
Sbjct: 528 LDSEGYLLFYHKQVLEHESEK 548


>gi|47215260|emb|CAF96987.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 535

 Score =  338 bits (868), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 210/578 (36%), Positives = 301/578 (52%), Gaps = 83/578 (14%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  CPH+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++
Sbjct: 8   PAGCPHVNSFKVDNWKQNLRVIYQCF---VWSGSAETRKRKAKSCICHMCG-AHLNRLHS 63

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C   +C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 64  CLHCVFFACFAKKH-----IHEHAKSK--RHNLAIDLLYGGIYCFMCQDYIYDKDME--- 113

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     +SN  +
Sbjct: 114 ---------QIAKDEQ-RKAWKMQGIGEKYSTWEPTKRELELLRHN--PKRRRITSNCTI 161

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 162 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 214

Query: 255 FSAI------------------------FCGDRMPYSPAKFLYSWWRHASNLASYEQQDA 290
           F  +                        + G R P+ P + L+  W HA +LA YEQQDA
Sbjct: 215 FQEVNAALRTRRTASFPPTQTHDFPLQFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDA 274

Query: 291 HEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           HEF I+ LD +H   + D  K  +  N   CI  ++F+G L+SDV C  C   STT DP 
Sbjct: 275 HEFLIAALDVLHRHCKDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPF 334

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
            D SLDL  +       S      + N E      S   G +TL  CL RFTRPE LGS 
Sbjct: 335 WDISLDLPGSSTPFWPLSPGGDASALNGE------SHATGATTLTDCLRRFTRPEHLGSS 388

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAP 470
            K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P
Sbjct: 389 AKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTP 446

Query: 471 YLSSSI---LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL- 526
           +++SS    +  ++     PF+ D         +++ LFAVV H G L++GHY T++R  
Sbjct: 447 FMASSKESRMNGQYQQIVDPFNND---------NKYSLFAVVNHQGTLESGHYTTFIRQH 497

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
            ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 498 KDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 535


>gi|410988611|ref|XP_004000577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Felis
           catus]
          Length = 752

 Score =  338 bits (867), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 301/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 218 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 273

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYDRD +
Sbjct: 274 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDRDIE 326

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         Y  W     E  L+ +N       SS
Sbjct: 327 QIAKEEQGEALKLQASTSTEVSHQQCSMPGLGEKYPTWETTKPELELLGHNPRRRRITSS 386

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 387 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 438

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 439 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 498

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 499 AGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 557

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 558 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 611

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 612 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 668

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 669 ----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 723

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 724 DSEGYLLFYHKQVLEHESEK 743


>gi|395854546|ref|XP_003799748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
           [Otolemur garnettii]
          Length = 888

 Score =  338 bits (866), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 299/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 354 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 409

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C+ C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 410 LHSCLFCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 462

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    L  ++         Y  W     E  L+ +N       SS
Sbjct: 463 QIAKEEQGEALKLQASTSTELSHQQCSVPGIGEKYPTWETTKPELELLGHNPRRRRITSS 522

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 523 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 574

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 575 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 634

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 635 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 693

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 694 SPGRESSVNGE------SHISGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 747

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 748 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 804

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 805 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 859

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 860 DSEGYLLFYHKQVLEHESEK 879


>gi|291407490|ref|XP_002719920.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
          Length = 803

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 209/560 (37%), Positives = 299/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 269 LGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCVCHVCG-AHLNR 324

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA     A  H +AVD+    ++C  C+D VYD+D +
Sbjct: 325 LHSCLSCVFFGCFT---EKHIHEHA----EAKQHTLAVDLYYGGIYCFMCKDYVYDKDIE 377

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         Y  W     E  L+ +N       SS
Sbjct: 378 QIAKEEQGEALKLQASASSEVSHQQCSGPGLGDKYPTWETTKPELELLGHNPRRRRIASS 437

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 438 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 489

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 490 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 549

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 550 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSSTSFWPM 608

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GISTL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 609 SPGRESSVNGE------SHLPGISTLTDCLRRFTRPEHLGSSAKIKCGGCQSYQESTKQL 662

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 663 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRINGQLQLPT 720

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
           +   +       +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 721 NSGSNE------NKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 774

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 775 DSEGYLLFYHKQVLEHESEK 794


>gi|403275468|ref|XP_003929464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Saimiri
           boliviensis boliviensis]
          Length = 555

 Score =  337 bits (865), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 201/518 (38%), Positives = 289/518 (55%), Gaps = 44/518 (8%)

Query: 51  GGRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSH 110
           GGR+   +  ++   C VCG     RL++C+ C    C    H     IH    S    H
Sbjct: 78  GGRSPALQPEAKSCICHVCG-VHLNRLHSCLYCVFFGCFTKKH-----IHEHAKSK--RH 129

Query: 111 EIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWS 168
            +A+D+    ++C  C+D +YD+D +          II   +     K +     +  W 
Sbjct: 130 NLAIDLMYGGIYCFLCQDYIYDKDME----------IIAKEEQRKAWKMQGAGEKFSTWE 179

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  RE  L+ +N  P     +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FL
Sbjct: 180 PTKRELELLKHN--PKRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFL 235

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH R   QS +    CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQ
Sbjct: 236 SDRH-RCEMQSPSS---CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQ 291

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTF 347
           DAHEF I+ LD +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT 
Sbjct: 292 DAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTI 351

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
           DP  D SLDL  +       S     +  N E      S   G +TL  CL RFTRPE L
Sbjct: 352 DPFWDISLDLPGSSTPFWPLSPGSEGNVVNGE------SHVAGTTTLTDCLRRFTRPEHL 405

Query: 408 GSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLD 467
           GS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LD
Sbjct: 406 GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELD 463

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL- 526
           M P+++SS   SR   ++       +++LN   +++ LFAVV H G L++GHY +++R  
Sbjct: 464 MTPFMASS-KESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQH 517

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
            ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 518 KDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 555


>gi|348553656|ref|XP_003462642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Cavia
           porcellus]
          Length = 806

 Score =  337 bits (865), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 209/560 (37%), Positives = 300/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 272 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 327

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 328 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 380

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         Y  W     E  L+ +N       SS
Sbjct: 381 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKYPTWETTKPELELLGHNPRRRRITSS 440

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 441 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 492

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 493 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 552

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 553 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 611

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 612 SPGRETSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 665

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 666 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 722

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 723 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 777

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 778 DSEGYLLFYHKQVLEHESEK 797


>gi|301764739|ref|XP_002917826.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like
           [Ailuropoda melanoleuca]
          Length = 596

 Score =  337 bits (865), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 209/560 (37%), Positives = 301/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 62  VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 117

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 118 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 170

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         Y  W     E  L+ +N       SS
Sbjct: 171 QIAKEEQGEALKLQASASTEVSHQQCSVPGLGEKYPTWETTKPELELLGHNPRRRRITSS 230

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 231 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 282

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 283 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 342

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 343 AGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 401

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 402 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 455

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 456 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 512

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 513 ----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 567

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 568 DSEGYLLFYHKQVLEHESEK 587


>gi|335306036|ref|XP_003135145.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Sus
           scrofa]
          Length = 904

 Score =  337 bits (865), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 215/565 (38%), Positives = 302/565 (53%), Gaps = 54/565 (9%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 370 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 425

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 426 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 478

Query: 137 --------AAVVLAHTTSI----IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
                    A+ L  +TS      Q S P    K     Y  W     E  L+ +N    
Sbjct: 479 QIAKEEQGEALKLQASTSTEVSHQQCSMPGLGEK-----YPTWETTKPELELLGHNPRRR 533

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
              SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   
Sbjct: 534 RITSS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PE 585

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
           LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H  
Sbjct: 586 LCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRH 645

Query: 305 VEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
            + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +
Sbjct: 646 CKGDDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCT 704

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QE
Sbjct: 705 SFWPMSPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQE 758

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           S KQ+++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G 
Sbjct: 759 STKQLTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQ 816

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVN 542
              P     +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +
Sbjct: 817 LQLP-----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKAS 870

Query: 543 ENTVRAAQGYMMFYVQKMLYYKASE 567
              V  ++GY++FY +++L +++ +
Sbjct: 871 IKDVLDSEGYLLFYHKQVLEHESEK 895


>gi|431907760|gb|ELK11368.1| Ubiquitin carboxyl-terminal hydrolase 22 A [Pteropus alecto]
          Length = 793

 Score =  337 bits (864), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 213/562 (37%), Positives = 298/562 (53%), Gaps = 48/562 (8%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  K  R I  C       G    R+  ++   C VC  +   R
Sbjct: 259 VGPPGCSHVNSFKVGENWRKELRVIYQCFVW---CGTPETRKSKAKSCICHVC-STHLNR 314

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 315 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 367

Query: 137 --------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMS 188
                    A+ L  +TS  + S  +    R    Y  W     E  L+ +N       S
Sbjct: 368 QIAKEEQGEALKLQASTST-EVSHQQCSVSRLGEKYPTWETTKPELELLGHNPRRRRITS 426

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           S       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL 
Sbjct: 427 S----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLV 478

Query: 249 CDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD 308
           C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D
Sbjct: 479 CEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGD 538

Query: 309 QHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
                +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S   
Sbjct: 539 DAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWP 597

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            S     S N E      S   G +TL  CL RFTRPE LGS  K  C  CQ  QES KQ
Sbjct: 598 MSPGRESSVNGE------SHIPGTTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 651

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           +++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P
Sbjct: 652 LTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP 709

Query: 488 F-DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENT 545
              G+E N       ++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   
Sbjct: 710 TSSGNEEN-------KYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKD 762

Query: 546 VRAAQGYMMFYVQKMLYYKASE 567
           V  ++GY++FY +++L +++ +
Sbjct: 763 VLDSEGYLLFYHKQVLEHESEK 784


>gi|345806939|ref|XP_003435526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Canis
           lupus familiaris]
          Length = 809

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 209/560 (37%), Positives = 300/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 275 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 330

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 331 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 383

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         Y  W     E  L+  N       SS
Sbjct: 384 QIAKEEQGEALKLQASTSTEVSHQQCSVMGLGEKYPTWEMTKPELELLGYNPRRRRITSS 443

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 444 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 495

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 496 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 555

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 556 AGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 614

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 615 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 668

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 669 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 725

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 726 ----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 780

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 781 DSEGYLLFYHKQVLEHESEK 800


>gi|410051732|ref|XP_003953155.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 22 [Pan troglodytes]
          Length = 513

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 285/503 (56%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH  + + A  H +A+D+    ++C  
Sbjct: 51  CHVCG-VHLNRLHSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFL 102

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 103 CQDYIYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 150

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 151 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 206

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 207 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 264

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 265 HCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 324

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S     +  N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 325 PFWPLSPGSEGNVVNGE------SHMSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 378

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR  
Sbjct: 379 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMN 435

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
            ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 436 GQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 490

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 491 SIKDVLDSEGYLLFYHKQFLEYE 513


>gi|397466402|ref|XP_003804951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pan paniscus]
          Length = 513

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 285/503 (56%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH  + + A  H +A+D+    ++C  
Sbjct: 51  CHVCG-VHLNRLHSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFL 102

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 103 CQDYIYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 150

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 151 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 206

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 207 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 264

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 265 HCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 324

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S     +  N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 325 PFWPLSPGSEGNVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 378

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR  
Sbjct: 379 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMN 435

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
            ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 436 GQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 490

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 491 SIKDVLDSEGYLLFYHKQFLEYE 513


>gi|84569929|gb|AAI10500.1| USP22 protein [Homo sapiens]
          Length = 512

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 285/503 (56%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH  + + A  H +A+D+    ++C  
Sbjct: 50  CHVCG-VHLNRLHSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFL 101

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 102 CQDYIYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 149

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 150 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 205

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 206 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 263

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 264 HCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 323

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S     +  N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 324 PFWPLSPGSEGNVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 377

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR  
Sbjct: 378 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMN 434

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
            ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 435 GQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 489

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 490 SIKDVLDSEGYLLFYHKQFLEYE 512


>gi|117558705|gb|AAI26899.1| USP22 protein [Homo sapiens]
          Length = 513

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 285/503 (56%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH  + + A  H +A+D+    ++C  
Sbjct: 51  CHVCG-VHLNRLHSCLYCVFFGCLTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFL 102

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 103 CQDYIYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 150

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 151 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 206

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 207 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 264

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 265 HCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 324

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S     +  N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 325 PFWPLSPGSEGNVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 378

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR  
Sbjct: 379 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMN 435

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
            ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 436 GQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 490

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 491 SIKDVLDSEGYLLFYHKQFLEYE 513


>gi|344298090|ref|XP_003420727.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Loxodonta
           africana]
          Length = 592

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/537 (37%), Positives = 294/537 (54%), Gaps = 55/537 (10%)

Query: 43  DCLHIKPPGGRAAIR-----------RDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVP 91
           D  ++  P   AA+R           R  ++   C VCG +   RL++C+ C    C   
Sbjct: 96  DAFYLVSPMYVAAVRGVYGDGHQLCLRQHAKSCVCHVCG-AHLNRLHSCLYCVFFGCFTK 154

Query: 92  PHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSS 151
            H     IH    S    H +A+D+    ++C  C+D +YD+D +          II   
Sbjct: 155 KH-----IHEHAKSK--RHNLAIDLTYGGIYCFLCQDYIYDKDME----------IIAKE 197

Query: 152 KPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCF 209
           +     K + +   +  W P  RE  L+ +N  P     +SN  +  GLRGL NLGNTCF
Sbjct: 198 EQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI--GLRGLINLGNTCF 253

Query: 210 MNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPA 269
           MN ++QAL HTP LR++FLSDRH    C+ ++    CL C++ ++F   + G R P+ P 
Sbjct: 254 MNCIVQALTHTPLLRDFFLSDRHK---CEMQSPSS-CLVCEMSSLFQEFYSGHRSPHIPY 309

Query: 270 KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFS 328
           K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++     C CI  ++F+
Sbjct: 310 KLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFT 369

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G L+SDV C  C   STT DP  D SLDL  +       S        N E      S  
Sbjct: 370 GGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSMVNGE------SHA 423

Query: 389 CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS 448
            G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+
Sbjct: 424 SGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA 483

Query: 449 VRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAV 508
             K+ RK+  Y+ FPL LDM P+++SS   SR   ++       +++LN   +++ LFAV
Sbjct: 484 --KLRRKITTYVSFPLELDMTPFMASSK-ESRMNGQY----QQPTDSLNN-DNKYSLFAV 535

Query: 509 VTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           V H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 536 VNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 592


>gi|281353638|gb|EFB29222.1| hypothetical protein PANDA_006152 [Ailuropoda melanoleuca]
          Length = 538

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 209/557 (37%), Positives = 299/557 (53%), Gaps = 44/557 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 16  VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 71

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 72  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 124

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         Y  W     E  L+ +N       SS
Sbjct: 125 QIAKEEQGEALKLQASASTEVSHQQCSVPGLGEKYPTWETTKPELELLGHNPRRRRITSS 184

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 185 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 236

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 237 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 296

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 297 AGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 355

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 356 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 409

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 410 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 466

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 467 ----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 521

Query: 548 AAQGYMMFYVQKMLYYK 564
            ++GY++FY +++L ++
Sbjct: 522 DSEGYLLFYHKQVLEHE 538


>gi|395753974|ref|XP_002831695.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pongo abelii]
          Length = 665

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/560 (37%), Positives = 300/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 131 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 186

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 187 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 239

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         +  W     E  L+ +N       SS
Sbjct: 240 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSS 299

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 300 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 351

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 352 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 411

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 412 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 470

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 471 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 524

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 525 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 581

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 582 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 636

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 637 DSEGYLLFYHKQVLEHESEK 656


>gi|194227923|ref|XP_001494487.2| PREDICTED: hypothetical protein LOC100063066 [Equus caballus]
          Length = 1112

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 214/565 (37%), Positives = 302/565 (53%), Gaps = 54/565 (9%)

Query: 18   IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
            + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 578  VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 633

Query: 77   LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
            L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 634  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 686

Query: 137  --------AAVVLAHTTSI----IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
                     A+ L  +TS      Q S P    K     Y  W     E  L+ +N    
Sbjct: 687  QIAKEEQGEALKLQASTSTEVSHQQCSMPGLGEK-----YPTWETTKPELELLGHNPRRR 741

Query: 185  DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
               SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   
Sbjct: 742  RITSS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PE 793

Query: 245  LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
            LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H  
Sbjct: 794  LCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRH 853

Query: 305  VEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             + D     +     C CI  ++F+G ++SDV C AC   STT DPC D SLDL P   +
Sbjct: 854  CKGDDAGKAANNPNHCNCIIDQIFTGGMQSDVTCQACHGVSTTIDPCWDISLDL-PGSCT 912

Query: 364  SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
            S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QE
Sbjct: 913  SFWPMSPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQE 966

Query: 424  SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
            S KQ+++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G 
Sbjct: 967  STKQLTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQ 1024

Query: 484  RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVN 542
               P     +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +
Sbjct: 1025 LQLP-----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKAS 1078

Query: 543  ENTVRAAQGYMMFYVQKMLYYKASE 567
               V  ++GY++FY +++L +++ +
Sbjct: 1079 IKDVLDSEGYLLFYHKQVLEHESEK 1103


>gi|281346341|gb|EFB21925.1| hypothetical protein PANDA_019055 [Ailuropoda melanoleuca]
          Length = 511

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 204/548 (37%), Positives = 296/548 (54%), Gaps = 48/548 (8%)

Query: 10  QNDKTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVC 69
           +++  + ++ P  C HL+ F   N  +  RAI  C       G A  R+  ++   C VC
Sbjct: 8   ESEAMDAELTPPGCSHLSSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVC 64

Query: 70  GDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQ 129
           G     RL++C+ C    C    H     IH    S       A+++    ++C  C+D 
Sbjct: 65  G-IHLNRLHSCLHCVFFGCFTKKH-----IHEHAKSK---RHRAIELMYGGIYCFLCQDY 115

Query: 130 VYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSM 187
           +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P    
Sbjct: 116 IYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRK 163

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
            +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL
Sbjct: 164 ITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CL 217

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
            C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + 
Sbjct: 218 VCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKG 277

Query: 308 DQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
           D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +      
Sbjct: 278 DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWP 337

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
            S        N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES K
Sbjct: 338 LSPGSEGSVVNGE------SHVAGTTTLTDCLRRFTRPEHLGSGAKIKCSGCHSYQESTK 391

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           Q++++K+P+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++ 
Sbjct: 392 QLTMKKVPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQYQ 448

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENT 545
                 +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   
Sbjct: 449 QL----TDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIED 503

Query: 546 VRAAQGYM 553
           V  ++GY+
Sbjct: 504 VLDSEGYV 511


>gi|410980119|ref|XP_003996426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Felis catus]
          Length = 470

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 282/503 (56%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH    S    H +A+D+    ++C  
Sbjct: 8   CHVCG-VHLNRLHSCLHCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFL 59

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 60  CQDYIYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 107

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 108 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 163

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 164 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 221

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 222 HCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 281

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S        N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 282 PFWPLSPGSEGSVVNGE------SHVAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 335

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR  
Sbjct: 336 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMN 392

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
            ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 393 GQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 447

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 448 SIEDVLDSEGYLLFYHKQFLEYE 470


>gi|397468706|ref|XP_003806014.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pan paniscus]
          Length = 642

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 208/560 (37%), Positives = 300/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 108 VGPPGCSHVNSFKVGENWRQELRVIYQCF---VWCGTPETRKSKAKSCICHVCG-THLNR 163

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 164 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 216

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         +  W     E  L+ +N       SS
Sbjct: 217 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSS 276

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 277 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 328

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 329 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 388

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 389 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 447

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 448 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 501

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 502 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 558

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 559 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 613

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 614 DSEGYLLFYHKQVLEHESEK 633


>gi|229597175|gb|AAI37613.1| Usp27x protein [Mus musculus]
          Length = 733

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 209/554 (37%), Positives = 297/554 (53%), Gaps = 44/554 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 199 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCVCHVCG-THLNR 254

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD D +
Sbjct: 255 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDIDIE 307

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    + +++         Y  W     E  L+ +N       SS
Sbjct: 308 QIAKEEQGEALKLQASTSTEVSQQQCSVPGLGEKYPTWETTKPELELLGHNPRRRRIASS 367

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 368 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 419

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 420 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 479

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 480 VGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 538

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 539 SPGRESSLNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 592

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           +++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 593 TMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLP- 649

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 650 ----TNSANN-ENKYSLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVL 704

Query: 548 AAQGYMMFYVQKML 561
            ++GY++FY +++L
Sbjct: 705 DSEGYLLFYHKQVL 718


>gi|403297603|ref|XP_003939647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
           [Saimiri boliviensis boliviensis]
          Length = 550

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 208/560 (37%), Positives = 301/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 16  VGPPGCSHVNSFKVGENWRQELRVIYQCF---VWCGTPETRKSKAKSCICHVCG-THLNR 71

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 72  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 124

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S  + +  ++         +  W     E  L+ +N       SS
Sbjct: 125 QIAKEEQGEALKLQASTSKEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSS 184

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 185 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 236

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 237 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 296

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 297 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 355

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 356 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 409

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 410 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 466

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 467 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 521

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 522 DSEGYLLFYHKQVLEHESEK 541


>gi|392343086|ref|XP_003754792.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
           norvegicus]
          Length = 837

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 208/557 (37%), Positives = 298/557 (53%), Gaps = 44/557 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 303 VGPPGCSHVNTFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCVCHVCG-THLNR 358

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD D +
Sbjct: 359 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDIDIE 411

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S      +++         Y  W     E  L+ +N       SS
Sbjct: 412 QIAKEEQGEALKLQASTSTEFSQQQCSVPSLGEKYPTWETTKPELELLGHNPRRRRIASS 471

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 472 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 523

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 524 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 583

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 584 VGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 642

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   G++TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 643 SPGRESSLNGE------SHIPGVTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 696

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           +++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 697 TMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLP- 753

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 754 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVL 808

Query: 548 AAQGYMMFYVQKMLYYK 564
            ++GY++FY +++L ++
Sbjct: 809 DSEGYLLFYHKQVLEHE 825


>gi|402910176|ref|XP_003917765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Papio anubis]
          Length = 726

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 208/560 (37%), Positives = 300/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 192 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 247

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 248 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 300

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         +  W     E  L+ +N       SS
Sbjct: 301 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSS 360

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 361 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 412

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 413 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 472

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 473 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 531

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 532 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 585

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 586 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 642

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 643 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 697

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 698 DSEGYLLFYHKQVLEHESEK 717


>gi|291414911|ref|XP_002723699.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
          Length = 529

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 205/538 (38%), Positives = 289/538 (53%), Gaps = 47/538 (8%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 18  VAPPGCSHLGSFKVDNWKQNLRAIYQCF---VWSGTAEARKRKAKSCVCHVCG-VHLNRL 73

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 74  HSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDME- 125

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    +I   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 126 ---------VIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 173

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 174 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 228

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 229 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL          S      
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGCSTPFWPLSPGSEGS 348

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 349 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 402

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 403 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTD 455

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQG 551
           +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++G
Sbjct: 456 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEG 512


>gi|359319450|ref|XP_851968.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Canis lupus
           familiaris]
          Length = 474

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 199/512 (38%), Positives = 286/512 (55%), Gaps = 44/512 (8%)

Query: 57  RRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDV 116
           RR  ++   C VCG     RL++C+ C    C    H     IH    S    H +A+++
Sbjct: 3   RRARAKSCVCHVCG-VHLNRLHSCLHCVFFGCFTKKH-----IHEHAKSK--RHNLAIEL 54

Query: 117 DRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRER 174
               ++C  C+D +YD+D +          II   +     K + +   +  W P  RE 
Sbjct: 55  MYGGIYCFLCQDYIYDKDIE----------IIAKEEQRKAWKMQGVGEKFSTWEPTKREL 104

Query: 175 SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
            L+ +N  P     +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R
Sbjct: 105 ELLKHN--PKRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-R 159

Query: 235 YYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
              QS +    CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF 
Sbjct: 160 CEMQSPSS---CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFL 216

Query: 295 ISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
           I+ LD +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D 
Sbjct: 217 IAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 276

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SLDL  +       S        N E      S   G +TL  CL RFTRPE LGS  K 
Sbjct: 277 SLDLPGSSTPFWPLSPGSEGSVVNGE------SHVAGTTTLTDCLRRFTRPEHLGSSAKI 330

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLS 473
            C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++
Sbjct: 331 KCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMA 388

Query: 474 SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYK 532
           SS   SR   ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+K
Sbjct: 389 SS-KESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFK 442

Query: 533 CDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           CDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 443 CDDAIITKASIEDVLDSEGYLLFYHKQFLEYE 474


>gi|26326383|dbj|BAC26935.1| unnamed protein product [Mus musculus]
          Length = 540

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 209/554 (37%), Positives = 297/554 (53%), Gaps = 44/554 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 6   VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCVCHVCG-THLNR 61

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD D +
Sbjct: 62  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDIDIE 114

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    + +++         Y  W     E  L+ +N       SS
Sbjct: 115 QIAKEEQGEALKLQASTSTEVSQQQCSVPGLGEKYPTWETTKPELELLGHNPRRRRIASS 174

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 175 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 226

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 227 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 286

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 287 VGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 345

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 346 SPGRESSLNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 399

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           +++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 400 TMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLP- 456

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 457 ----TNSANN-ENKYSLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVL 511

Query: 548 AAQGYMMFYVQKML 561
            ++GY++FY +++L
Sbjct: 512 DSEGYLLFYHKQVL 525


>gi|440795181|gb|ELR16317.1| ubiquitin carboxylterminal hydrolase 22, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 535

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 209/574 (36%), Positives = 296/574 (51%), Gaps = 96/574 (16%)

Query: 11  NDKTNGQIFPQ-PCPHLADFHARNGTKPFRAIQDCL-----HIKPP-------GGRAAIR 57
           N   NG+I P+  C H+  F    G +  + +   L     HI  P       GG  A+ 
Sbjct: 17  NGGLNGRIGPRGSCVHMQAFKHSGGLEMAKPVMQYLCICRHHILGPSPVPVMVGGVQAL- 75

Query: 58  RDSSEVP-RC-GVCGDSSCPRLYACMACAAVSCHVPPH-SSHVAIHATKTSSACSHEIAV 114
                VP RC G        RL+AC+ C  V C    H ++H+A H        +H +AV
Sbjct: 76  ----SVPARCFGCAAPGMGRRLHACLHCVFVGCADGGHLAAHLAEH--------NHTLAV 123

Query: 115 DVDRAELFCCACRDQVYDRDFDAAVVLAHTT-SIIQSSKPENLRKRRRIDYRPWSPDLRE 173
           DV   +L+C AC+D VYDRDF+       +T S ++    E   K+  + Y  W+P   +
Sbjct: 124 DVSHGQLYCGACKDYVYDRDFELQAAKEQSTFSAVKQKLAEPSVKQ--VKYNVWAPSTDD 181

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHN 233
            + + NN+      S+       GLRGL N+GNTCFMN +LQ+L H P LRNYFLSD HN
Sbjct: 182 INQLSNNSKRCTVPSNL-----LGLRGLYNMGNTCFMNCILQSLLHNPLLRNYFLSDLHN 236

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
           R  C S N   +CLAC+LD +F+ ++ G   PY+P  FLYS WRHA NLA Y+QQDAHEF
Sbjct: 237 RSGC-SANRDDICLACELDYLFAEVYSGTGAPYAPYHFLYSMWRHADNLAGYDQQDAHEF 295

Query: 294 FISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
            IS L+G+H      +H   S      CI H++FSG LRSD+ C+ CG+TST  DP  D 
Sbjct: 296 LISTLNGLH------KHSGGSTAASCRCIVHQIFSGRLRSDLTCLRCGYTSTAIDPFFDI 349

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SLDL   + +  + + +       C                                   
Sbjct: 350 SLDLPKARSAPRQAAGSLQQQQTGCN---------------------------------- 375

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKM--SRKVDRYLQFPLSLDMAPY 471
                   Q+S KQ+S++ LPLV CFH+KRF+   +     S K+D ++++P  LDM+PY
Sbjct: 376 -----NTYQDSTKQLSMQSLPLVLCFHLKRFKQEGLASTASSSKIDTHIRYPFVLDMSPY 430

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWY 531
            SS+I+  R G              + P   +ELFAVV H GK+D GH+V ++R  ++W+
Sbjct: 431 ASSTIVSQRLGRE----------PPSAPPDLYELFAVVDHKGKIDNGHFVCFVRHESRWF 480

Query: 532 KCDDAWITEVNENTVRAAQG-YMMFYVQKMLYYK 564
           KCDDA IT    + +  ++G Y++FY+++ L Y+
Sbjct: 481 KCDDATITPTQPHQIARSKGSYLLFYMRRSLTYE 514


>gi|392355526|ref|XP_003752062.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
           norvegicus]
          Length = 912

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 208/557 (37%), Positives = 298/557 (53%), Gaps = 44/557 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 378 VGPPGCSHVNTFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCVCHVCG-THLNR 433

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD D +
Sbjct: 434 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDIDIE 486

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S      +++         Y  W     E  L+ +N       SS
Sbjct: 487 QIAKEEQGEALKLQASTSTEFSQQQCSVPSLGEKYPTWETTKPELELLGHNPRRRRIASS 546

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 547 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 598

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 599 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 658

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 659 VGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 717

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   G++TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 718 SPGRESSLNGE------SHIPGVTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 771

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           +++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 772 TMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLP- 828

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 829 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVL 883

Query: 548 AAQGYMMFYVQKMLYYK 564
            ++GY++FY +++L ++
Sbjct: 884 DSEGYLLFYHKQVLEHE 900


>gi|432868293|ref|XP_004071466.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
           1 [Oryzias latipes]
          Length = 510

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 203/555 (36%), Positives = 297/555 (53%), Gaps = 57/555 (10%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  +   N  +  R I  C       G A  RR  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGYKVDNWKQNLRVIYQCF---VWSGTAETRRRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD++ +   
Sbjct: 59  CLYCVFFGCFT---KKHIHEHAKNKR----HNLAIDLLYGGIYCFVCQDYIYDKEME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     ++N  +
Sbjct: 109 ---------QIAKEEQ-RKAWKLQGIGEKYTTWEPTKRELELLRHN--PKRRKITTNCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE----KDQH 310
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   +     D  
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNG 269

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
           K  +  N   CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S  
Sbjct: 270 KKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPG 329

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
             + + N E          G +TL  CL RFTRPE LGS  K  C  C   QES KQ+++
Sbjct: 330 GDSGTVNGEG------HLSGSTTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTM 383

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
           +KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++     
Sbjct: 384 KKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----- 435

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAA 549
            ++  +    +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  +
Sbjct: 436 QQTVEVLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDS 495

Query: 550 QGYMMFYVQKMLYYK 564
           +GY++FY +  L Y+
Sbjct: 496 EGYLLFYHKHFLEYE 510


>gi|440912738|gb|ELR62279.1| Ubiquitin carboxyl-terminal hydrolase 22-A, partial [Bos grunniens
           mutus]
          Length = 541

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 207/553 (37%), Positives = 298/553 (53%), Gaps = 44/553 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 8   VGPPGCSHVNSFKVGENWRQELRVIYQCF---VWCGTPETRKSKAKSCICHVCG-THLNR 63

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYDRD +
Sbjct: 64  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDRDIE 116

Query: 137 AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR 196
                     I +  + E L+ +                L +   +P     +S+  +  
Sbjct: 117 ---------QIAKEEQGEALKLQASTSTEVSHQQYSVPGLELLGHNPRRRRIASSFTI-- 165

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C++ ++F 
Sbjct: 166 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVCEMSSLFR 221

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
            ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D     +  
Sbjct: 222 ELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAASN 281

Query: 317 NGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    S     S
Sbjct: 282 PNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPMSPGRESS 340

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
            N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+++ KLP+
Sbjct: 341 VNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPV 394

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P     +N+
Sbjct: 395 VACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP-----TNS 447

Query: 496 LNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMM 554
            N+  +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++
Sbjct: 448 GND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLL 506

Query: 555 FYVQKMLYYKASE 567
           FY +++L +++ +
Sbjct: 507 FYHKQVLEHESEK 519


>gi|355727971|gb|AES09371.1| ubiquitin specific peptidase 27, X-linked [Mustela putorius furo]
          Length = 514

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 202/530 (38%), Positives = 292/530 (55%), Gaps = 40/530 (7%)

Query: 52  GRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHE 111
           G    R+  ++   C VCG +   RL++C++C    C       H+  HA        H 
Sbjct: 13  GTPETRKSKAKSCICHVCG-THLNRLHSCLSCVFFGCFT---EKHIHEHAETKQ----HN 64

Query: 112 IAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDY 164
           +AVD+    ++C  C+D VYD+D +         ++ +Q+S    +  ++         Y
Sbjct: 65  LAVDLYYGGIYCFMCKDYVYDKDIEQIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKY 124

Query: 165 RPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR 224
             W     E  L+ +N       SS       GLRGL NLGNTCFMN ++QAL HTP LR
Sbjct: 125 PTWETTKPELELLGHNPRRRRITSS----FTIGLRGLINLGNTCFMNCIVQALTHTPILR 180

Query: 225 NYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLAS 284
           ++FLSDRH    C+  +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA 
Sbjct: 181 DFFLSDRHR---CEMPSP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAG 236

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFT 343
           Y QQDAHEF I+ LD +H   + D     +     C CI  ++F+G L+SDV C AC   
Sbjct: 237 YRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGV 296

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           STT DPC D SLDL P   +S    S     S N E      S   GI+TL  CL RFTR
Sbjct: 297 STTIDPCWDISLDL-PGSCTSFWPMSPGRESSVNGE------SHLPGITTLTDCLRRFTR 349

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
           PE LGS  K  C  CQ  QES KQ+++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FP
Sbjct: 350 PEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFP 407

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTY 523
           L LDM P+++SS      G    P     +N+ N+  +++ LFAVV H G L++GHY ++
Sbjct: 408 LELDMTPFMASSKESRMNGQLQLP-----TNSAND-ENKYSLFAVVNHQGTLESGHYTSF 461

Query: 524 LR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEKQGTS 572
           +R   ++W+KCDDA IT+ +   V  ++GY++FY +++L +++ + +  S
Sbjct: 462 IRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLEHESEKVKEMS 511


>gi|426395913|ref|XP_004064203.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
           [Gorilla gorilla gorilla]
          Length = 549

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 208/560 (37%), Positives = 300/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 15  VGPPGCSHVNSFKVGENWRQELRVIYQCF---VWCGTPETRKSKAKSCICHVCG-THLNR 70

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 71  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 123

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         +  W     E  L+ +N       SS
Sbjct: 124 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSS 183

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 184 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 235

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 236 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 295

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 296 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 354

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 355 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 408

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 409 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 465

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 466 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 520

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 521 DSEGYLLFYHKQVLEHESEK 540


>gi|345305249|ref|XP_001511206.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
           [Ornithorhynchus anatinus]
          Length = 540

 Score =  334 bits (857), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 198/506 (39%), Positives = 287/506 (56%), Gaps = 50/506 (9%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C +CG +   RL++C+ C    C       H+  HA KT     H +A+D+    ++C  
Sbjct: 78  CHMCG-AHLNRLHSCLYCVFFGCFT---KKHIHEHA-KTKR---HNLAIDLLYGGIYCFM 129

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNN 180
           C+D +YD+D +            Q +K E  RK  ++      Y  W P  RE  L+ +N
Sbjct: 130 CQDYIYDKDLE------------QIAKEEQ-RKAWKLQGIGEKYSTWEPTKRELELLRHN 176

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
             P     ++N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ +
Sbjct: 177 --PKRRKITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQ 229

Query: 241 NGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
           +    CL C++ T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD 
Sbjct: 230 SPSS-CLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDV 288

Query: 301 IHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  
Sbjct: 289 LHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 348

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
           +       S        N E      S   G +TL  CL RFTRPE LGS  K  C  C 
Sbjct: 349 SSTPFWPLSPGSDGSVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCH 402

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
             QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   S
Sbjct: 403 SYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSK-ES 459

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWI 538
           R   ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA I
Sbjct: 460 RMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAII 514

Query: 539 TEVNENTVRAAQGYMMFYVQKMLYYK 564
           T+ +   V  ++GY++FY ++ L Y+
Sbjct: 515 TKASIKDVLDSEGYLLFYHKQFLEYE 540


>gi|441675766|ref|XP_003276933.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Nomascus
           leucogenys]
          Length = 788

 Score =  334 bits (857), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 208/560 (37%), Positives = 300/560 (53%), Gaps = 44/560 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 254 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 309

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 310 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 362

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         +  W     E  L+ +N       SS
Sbjct: 363 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSS 422

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 423 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 474

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 475 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 534

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 535 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 593

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 594 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 647

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P 
Sbjct: 648 TMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLP- 704

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
               +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 705 ----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 759

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 760 DSEGYLLFYHKQVLEHESEK 779


>gi|351713027|gb|EHB15946.1| Ubiquitin carboxyl-terminal hydrolase 22 [Heterocephalus glaber]
          Length = 490

 Score =  334 bits (856), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 198/506 (39%), Positives = 280/506 (55%), Gaps = 50/506 (9%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH    +    H +A+D+    ++C  
Sbjct: 28  CHVCG-VHLNRLHSCLYCVFFGCFTKKH-----IHEHAKTK--RHNLAIDLTYGGIYCFL 79

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNN 180
           C+D +YD+D +                 E  RK  +I      +  W P  RE  L+ +N
Sbjct: 80  CQDYIYDKDMEIIA-------------KEEQRKAWKIQGVGEKFSTWEPTKRELELLKHN 126

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
             P     +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS 
Sbjct: 127 --PKRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSP 181

Query: 241 NGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
           +    CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD 
Sbjct: 182 SS---CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDV 238

Query: 301 IHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           +H   + D    ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  
Sbjct: 239 LHRHCKGDDSGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 298

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
           +       S        N E      S   G +TL  CL RFTRPE LGS  K  C  C 
Sbjct: 299 SSTQFWPLSPGSEGSMVNGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCH 352

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
             QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   S
Sbjct: 353 SYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KES 409

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWI 538
           R   ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA I
Sbjct: 410 RMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAII 464

Query: 539 TEVNENTVRAAQGYMMFYVQKMLYYK 564
           T+ +   V  ++GY++FY ++ L Y+
Sbjct: 465 TKASIKDVLDSEGYLLFYHKQFLEYE 490


>gi|149758247|ref|XP_001488653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Equus
           caballus]
          Length = 480

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 279/503 (55%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH    S    H +A+++    ++C  
Sbjct: 18  CHVCG-VHLNRLHSCLHCVFFGCFTKKH-----IHEHAKSK--RHHLAIELMYGGIYCFL 69

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 70  CQDYIYDKDME----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 117

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 118 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 173

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 174 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 231

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 232 HCKGDDNGKKANNPNHCSCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 291

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S        N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 292 PFWPLSPGSEGSVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 345

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G
Sbjct: 346 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNG 403

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
               P D     +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 404 QYQQPMD-----SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 457

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 458 SIEDVLDSEGYLLFYHKQFLEYE 480


>gi|355568328|gb|EHH24609.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca mulatta]
          Length = 469

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 199/506 (39%), Positives = 279/506 (55%), Gaps = 50/506 (9%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH    S    H +A+D+    ++C  
Sbjct: 7   CHVCG-VHLNRLHSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFL 58

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNN 180
           C+D +YD+D +                 E  RK  ++      +  W P  RE  L+ +N
Sbjct: 59  CQDYIYDKDMEIIA-------------KEEQRKAWKMQGAGEKFSTWEPTKRELELLKHN 105

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
             P     +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS 
Sbjct: 106 --PKRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSP 160

Query: 241 NGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
           +    CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD 
Sbjct: 161 SS---CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDV 217

Query: 301 IHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  
Sbjct: 218 LHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 277

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
           +       S     +  N E      S   G +TL  CL RFTRPE LGS  K  C  C 
Sbjct: 278 SSTPFWPLSPGSEGNVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCH 331

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
             QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS    
Sbjct: 332 SYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESR 389

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWI 538
             G    P D     +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA I
Sbjct: 390 MNGQSQQPTD-----SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAII 443

Query: 539 TEVNENTVRAAQGYMMFYVQKMLYYK 564
           T+ +   V  ++GY++FY ++ L Y+
Sbjct: 444 TKASIKDVLDSEGYLLFYHKQFLEYE 469


>gi|410902430|ref|XP_003964697.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
           1 [Takifugu rubripes]
          Length = 527

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 207/570 (36%), Positives = 296/570 (51%), Gaps = 70/570 (12%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  +   N  +  R I  C       G A  RR  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGYKVDNWKQNLRVIYQCF---VWTGTAETRRRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD--- 136
           C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLLYGGIYCFVCQDYIYDKDMEQIA 111

Query: 137 -----------------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVN 179
                            A V L    SI    K           Y  W P  RE  L+ +
Sbjct: 112 KEEQRKAWKLQGTSSLPALVCLHFLFSIGIGEK-----------YTTWEPTKRELELLRH 160

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
           N  P     ++N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ 
Sbjct: 161 N--PKRRKITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEM 213

Query: 240 KNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
           ++    CL C++  +F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD
Sbjct: 214 QSNS--CLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALD 271

Query: 300 GIHEKVE----KDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
            +H   +     D  K  +  N   CI  ++F+G L+SDV C  C   STT DP  D SL
Sbjct: 272 VLHRHCKGDTINDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISL 331

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
           DL  +       S      + N E      S   G +TL  CL RFTRPE LGS  K  C
Sbjct: 332 DLPGSSTPFWPLSPGGDGGTMNGE------SHLSGSTTLTDCLRRFTRPEHLGSSAKIKC 385

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS
Sbjct: 386 GGCHSYQESTKQLTLKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS 443

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCD 534
              SR   ++      ++  +    +++ LFAVV H G L++GHY +++R   ++W+KCD
Sbjct: 444 -KESRMNGQY-----QQTVEVLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCD 497

Query: 535 DAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           DA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 498 DAIITKASIKDVLDSEGYLLFYHKQFLEYE 527


>gi|440907885|gb|ELR57973.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Bos grunniens
           mutus]
          Length = 468

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 197/503 (39%), Positives = 283/503 (56%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH    S    H +A+++    ++C  
Sbjct: 6   CHVCG-LHLNRLHSCLHCVFFGCFTKKH-----IHEHAKSK--RHNLAIELMYGGIYCFL 57

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 58  CQDYIYDKDIE----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 105

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 106 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 161

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 162 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 219

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 220 HCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 279

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S    +   N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 280 PFWPLSPGSESSVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 333

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR  
Sbjct: 334 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMN 390

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
            ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 391 GQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 445

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 446 SIADVLDSEGYLLFYHKQFLEYE 468


>gi|7673618|gb|AAF66953.1|AF229643_1 ubiquitin specific protease [Mus musculus]
          Length = 525

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/539 (38%), Positives = 293/539 (54%), Gaps = 43/539 (7%)

Query: 32  RNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVP 91
           R G +  R I  C       G    R+  ++   C VCG +   RL++C++C    C   
Sbjct: 6   RTGRQELRVIYQCF---VWCGTPETRKGKAKSCVCHVCG-THLNRLHSCLSCVFFGCFT- 60

Query: 92  PHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSI-IQS 150
               H+  HA        H +AVD+    ++C  C+D VYD D +         ++ +Q+
Sbjct: 61  --EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDIDIEQIAKEEQGEALKLQA 114

Query: 151 SKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNL 204
           S    + +++         Y  W     E  L+ +N       SS       GLRGL NL
Sbjct: 115 STSTEVSQQQCSVPGLGEKYPTWETTKPELELLGHNPRRRRIASS----FAIGLRGLINL 170

Query: 205 GNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM 264
           GNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C++ ++F  ++ G+  
Sbjct: 171 GNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVCEMSSLFRELYSGNPS 226

Query: 265 PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIA 323
           P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D     +  +  C CI 
Sbjct: 227 PHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNHNHCNCII 286

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
            ++F+G L+SDV C AC   STT DPC D SLDL P   +S    S     S + E    
Sbjct: 287 DQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPMSPGRESSVDGE---- 341

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
             S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ++++KLP+V+CFH KR
Sbjct: 342 --SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKR 399

Query: 444 FEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEF 503
           FEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P     +N+ N   +++
Sbjct: 400 FEHSA--KQRRKIATYISFPLELDMTPFMASSKETRVNGQLQLP-----TNSANN-ENKY 451

Query: 504 ELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY +++L
Sbjct: 452 SLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVL 510


>gi|354485985|ref|XP_003505162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
           [Cricetulus griseus]
          Length = 541

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 207/558 (37%), Positives = 299/558 (53%), Gaps = 44/558 (7%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   RL+
Sbjct: 9   PPGCSHVNSFKVGENWRQELRVIYQCF---VWCGTPETRKSKAKSCICHVCG-THLNRLH 64

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +  
Sbjct: 65  SCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIEQI 117

Query: 139 VVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSSSN 191
                  ++ +Q+S    + +++         Y  W     E  L+ +N       SS  
Sbjct: 118 AKEEQGEALKLQASTSTEVSQQQCSVPGLGEKYLTWETTKPELELLGHNPRRRRITSS-- 175

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
                GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C++
Sbjct: 176 --FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVCEM 229

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
            ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D   
Sbjct: 230 SSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVG 289

Query: 312 PRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
             +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    S 
Sbjct: 290 KVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPMSP 348

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
               S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+++
Sbjct: 349 GRESSMNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCSSCQSYQESTKQLTM 402

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
           +KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P   
Sbjct: 403 KKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLP--- 457

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAA 549
             +N+ N   +++ LFA V H G L++GHY +++R   ++W+KCDDA I + +   V  +
Sbjct: 458 --TNSGNN-ENKYSLFAGVNHQGTLESGHYTSFIRHHRDQWFKCDDAVIIKASIKDVLNS 514

Query: 550 QGYMMFYVQKMLYYKASE 567
           +GY++FY +++L +++ +
Sbjct: 515 EGYLLFYHKQVLEHESEK 532


>gi|426238935|ref|XP_004013392.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Ovis aries]
          Length = 606

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 197/503 (39%), Positives = 283/503 (56%), Gaps = 44/503 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C    H     IH    S    H +A+++    ++C  
Sbjct: 144 CHVCG-LHLNRLHSCLHCVFFGCFTKKH-----IHEHAKSK--RHNLAIELMYGGIYCFL 195

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASP 183
           C+D +YD+D +          II   +     K + +   +  W P  RE  L+ +N  P
Sbjct: 196 CQDYIYDKDIE----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--P 243

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
                +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +  
Sbjct: 244 KRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS- 299

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H 
Sbjct: 300 --CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHR 357

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +  
Sbjct: 358 HCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSST 417

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                S    +   N E      S   G +TL  CL RFTRPE LGS  K  C  C   Q
Sbjct: 418 PFWPLSPGSESSVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQ 471

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR  
Sbjct: 472 ESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSK-ESRMN 528

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
            ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ 
Sbjct: 529 GQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKA 583

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
           +   V  ++GY++FY ++ L Y+
Sbjct: 584 SIADVLDSEGYLLFYHKQFLEYE 606


>gi|355753836|gb|EHH57801.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca
           fascicularis]
          Length = 469

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 197/506 (38%), Positives = 283/506 (55%), Gaps = 50/506 (9%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VCG     RL++C+ C    C          IH  K + +  H +A+D+    ++C  
Sbjct: 7   CHVCG-VHLNRLHSCLYCVFFGCFTKK-----DIH--KHAKSKRHNLAIDLMYGGIYCFL 58

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNN 180
           C+D +YD+D +                 E  RK  ++      +  W P  RE  L+ +N
Sbjct: 59  CQDYIYDKDMEIIA-------------KEEQRKAWKMQGAGEKFSTWEPTKRELELLKHN 105

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
             P     +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS 
Sbjct: 106 --PKRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSP 160

Query: 241 NGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
           +    CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD 
Sbjct: 161 SS---CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDV 217

Query: 301 IHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  
Sbjct: 218 LHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 277

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
           +       S     +  N E      S   G +TL  CL RFTRPE LGS  K  C  C 
Sbjct: 278 SSTPFWPLSPGSEGNVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCH 331

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
             QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   S
Sbjct: 332 SYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KES 388

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWI 538
           R   ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA I
Sbjct: 389 RMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAII 443

Query: 539 TEVNENTVRAAQGYMMFYVQKMLYYK 564
           T+ +   V  ++GY++FY ++ L Y+
Sbjct: 444 TKASIKDVLDSEGYLLFYHKQFLEYE 469


>gi|118097855|ref|XP_414805.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A [Gallus
           gallus]
          Length = 490

 Score =  331 bits (848), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 198/510 (38%), Positives = 292/510 (57%), Gaps = 43/510 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C +CG +   RL++C+ C    C       H+  HA KT     H +A+D+    ++C  
Sbjct: 13  CHMCG-AHLNRLHSCLYCVFFGCFT---KKHIHEHA-KTKR---HNLAIDLLYGGIYCFM 64

Query: 126 CRDQVYDRDFD---------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSL 176
           C+D +YD+D +         A  + A T +++   +        +  Y  W P  RE  L
Sbjct: 65  CQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEK--YSTWEPTKRELEL 122

Query: 177 MVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYY 236
           + +N  P     ++N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    
Sbjct: 123 LRHN--PKRRKITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK--- 175

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
           C+ ++    CL C++ T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+
Sbjct: 176 CEMQSPSS-CLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIA 234

Query: 297 MLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
            LD +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SL
Sbjct: 235 ALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISL 294

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
           DL P   +     S  S+ S     +G   S   G +TL  CL RFTRPE LGS  K  C
Sbjct: 295 DL-PGSSTPFWPLSPGSDGSV---VNG--ESHVSGTTTLTDCLRRFTRPEHLGSSAKIKC 348

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS
Sbjct: 349 SGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS 406

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCD 534
              SR   ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCD
Sbjct: 407 -KESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCD 460

Query: 535 DAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           DA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 461 DAIITKASIKDVLDSEGYLLFYHKQFLEYE 490


>gi|326929002|ref|XP_003210661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
           [Meleagris gallopavo]
          Length = 758

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 196/510 (38%), Positives = 288/510 (56%), Gaps = 43/510 (8%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C +CG +   RL++C+ C    C       H+  HA KT     H +A+D+    ++C  
Sbjct: 281 CHMCG-AHLNRLHSCLYCVFFGCFT---KKHIHEHA-KTKR---HNLAIDLLYGGIYCFM 332

Query: 126 CRDQVYDRDFD---------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSL 176
           C+D +YD+D +         A  + A T +++   +        +  Y  W P  RE  L
Sbjct: 333 CQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEK--YSTWEPTKRELEL 390

Query: 177 MVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYY 236
           + +N  P     ++N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    
Sbjct: 391 LRHN--PKRRKITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK--- 443

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
           C+ ++    CL C++ T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+
Sbjct: 444 CEMQSPSS-CLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIA 502

Query: 297 MLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
            LD +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SL
Sbjct: 503 ALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISL 562

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
           DL  +       S        N E      S   G +TL  CL RFTRPE LGS  K  C
Sbjct: 563 DLPGSSTPFWPLSPGSDGSVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKC 616

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS
Sbjct: 617 SGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS 674

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCD 534
              SR   ++       +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCD
Sbjct: 675 K-ESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCD 728

Query: 535 DAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           DA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 729 DAIITKASIKDVLDSEGYLLFYHKQFLEYE 758


>gi|34365073|emb|CAE45893.1| hypothetical protein [Homo sapiens]
          Length = 453

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/492 (39%), Positives = 279/492 (56%), Gaps = 43/492 (8%)

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C+ C    C    H     IH  + + A  H +A+D+    ++C  C+D +YD+D +
Sbjct: 1   LHSCLYCVFFGCFTKKH-----IH--EHAKAKRHNLAIDLMYGGIYCFLCQDYIYDKDME 53

Query: 137 AAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                     II   +     K + +   +  W P  RE  L+ +N  P     +SN  +
Sbjct: 54  ----------IIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI 101

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++
Sbjct: 102 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSL 155

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++
Sbjct: 156 FQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKA 215

Query: 315 QGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
                C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     
Sbjct: 216 NNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 275

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
           +  N E      S   G +TL  CL RFTRPE LGS     C  C   QES KQ++++KL
Sbjct: 276 NVVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSATIKCSGCHSYQESTKQLTMKKL 329

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
           P+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       +
Sbjct: 330 PIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPT 382

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGY 552
           ++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY
Sbjct: 383 DSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 441

Query: 553 MMFYVQKMLYYK 564
           ++FY ++ L Y+
Sbjct: 442 LLFYHKQFLEYE 453


>gi|432868295|ref|XP_004071467.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
           2 [Oryzias latipes]
          Length = 527

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 199/559 (35%), Positives = 296/559 (52%), Gaps = 48/559 (8%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  +   N  +  R I  C       G A  RR  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGYKVDNWKQNLRVIYQCF---VWSGTAETRRRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD--- 136
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD++ +   
Sbjct: 59  CLYCVFFGCFT---KKHIHEHAKNKR----HNLAIDLLYGGIYCFVCQDYIYDKEMEQIA 111

Query: 137 ------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
                 A  +     ++ + +    +       Y  W P  RE  L+ +N  P     ++
Sbjct: 112 KEEQRKAWKLQGDLKTVFELNVFCFVLTGIGEKYTTWEPTKRELELLRHN--PKRRKITT 169

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACD 250
           N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C+
Sbjct: 170 NCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCE 222

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE---- 306
           +  +F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   +    
Sbjct: 223 MSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTI 282

Query: 307 KDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
            D  K  +  N   CI  ++F+G L+SDV C  C   STT DP  D SLDL  +      
Sbjct: 283 NDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWP 342

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
            S    + + N E          G +TL  CL RFTRPE LGS  K  C  C   QES K
Sbjct: 343 LSPGGDSGTVNGEG------HLSGSTTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           Q++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++ 
Sbjct: 397 QLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY- 452

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENT 545
                ++  +    +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   
Sbjct: 453 ----QQTVEVLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKD 508

Query: 546 VRAAQGYMMFYVQKMLYYK 564
           V  ++GY++FY +  L Y+
Sbjct: 509 VLDSEGYLLFYHKHFLEYE 527


>gi|449475954|ref|XP_002188777.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
           [Taeniopygia guttata]
          Length = 476

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/500 (39%), Positives = 287/500 (57%), Gaps = 42/500 (8%)

Query: 76  RLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF 135
           RL++C+ C    C       H+  HA KT     H +A+D+    ++C  C+D +YD+D 
Sbjct: 8   RLHSCLYCVFFGCFT---KKHIHEHA-KTKR---HNLAIDLLYGGIYCFMCQDYIYDKDM 60

Query: 136 D---------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDS 186
           +         A  + A T +++   +        +  Y  W P  RE  L+ +N  P   
Sbjct: 61  EQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEK--YSTWEPTKRELELLRHN--PKRR 116

Query: 187 MSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC 246
             ++N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    C
Sbjct: 117 KITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSPSS-C 170

Query: 247 LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
           L C++ T+F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   +
Sbjct: 171 LVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK 230

Query: 307 KDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            D +  ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL P   +  
Sbjct: 231 GDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL-PGSSTPF 289

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
              S  S+ S     +G   S   G +TL  CL RFTRPE LGS  K  C  C   QES 
Sbjct: 290 WPLSPGSDGSV---VNG--ESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQEST 344

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++
Sbjct: 345 KQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY 401

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNEN 544
                  +++LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +  
Sbjct: 402 ----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIK 456

Query: 545 TVRAAQGYMMFYVQKMLYYK 564
            V  ++GY++FY ++ L Y+
Sbjct: 457 DVLDSEGYLLFYHKQFLEYE 476


>gi|148701945|gb|EDL33892.1| mCG3962 [Mus musculus]
          Length = 568

 Score =  328 bits (842), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 197/499 (39%), Positives = 279/499 (55%), Gaps = 40/499 (8%)

Query: 73  SCP-RLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVY 131
           +CP RL++C++C    C       H+  HA        H +AVD+    ++C  C+D VY
Sbjct: 85  TCPFRLHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVY 137

Query: 132 DRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPI 184
           D D +         ++ +Q+S    + +++         Y  W     E  L+ +N    
Sbjct: 138 DIDIEQIAKEEQGEALKLQASTSTEVSQQQCSVPGLGEKYPTWETTKPELELLGHNPRRR 197

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
              SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   
Sbjct: 198 RIASS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PE 249

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
           LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H  
Sbjct: 250 LCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRH 309

Query: 305 VEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
            + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +
Sbjct: 310 CKGDDVGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCT 368

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QE
Sbjct: 369 SFWPMSPGRESSLNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQE 422

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           S KQ++++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G 
Sbjct: 423 STKQLTMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKETRVNGQ 480

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVN 542
              P     +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +
Sbjct: 481 LQLP-----TNSANN-ENKYSLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDAVITKAS 534

Query: 543 ENTVRAAQGYMMFYVQKML 561
              V  ++GY++FY +++L
Sbjct: 535 IKDVLDSEGYLLFYHKQVL 553


>gi|301792557|ref|XP_002931245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
           [Ailuropoda melanoleuca]
 gi|281352689|gb|EFB28273.1| hypothetical protein PANDA_022094 [Ailuropoda melanoleuca]
          Length = 703

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 202/562 (35%), Positives = 296/562 (52%), Gaps = 66/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F  A+N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 185 PTGCTHVESFKVAKNWRKNLRLIYQRFVW---SGTPETRKHKAKSCICHVCS-THMNRLH 240

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C+AC    C    H     IH  K +    H +AVD+ R  ++C  C+D VYD+D +  
Sbjct: 241 SCLACVFFGCFTEKH-----IH--KHAETKQHNLAVDLYRGVIYCFMCKDYVYDKDME-- 291

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K +NL+          S D+ ++  M +      S   S        
Sbjct: 292 -------RIAKETKEKNLKLTST------STDVSQQQCMTSGVEERHSTCESKEQEPKLV 338

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 339 KPKKKRRKKSVYTIGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 394

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F+A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 395 PSLCLVCEMSSLFNAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 454

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 455 -RHSKDDSIGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 512

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + S +   S     D +      GI +L  CL  FTRPE LGS+ K  C  CQ 
Sbjct: 513 SCATFSSQSPERADSTVSRDDHIP-----GIPSLTDCLQWFTRPEYLGSNSKIKCSSCQS 567

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES+KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 568 YQESIKQLTMKKLPVVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESR 624

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                   +G          +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 625 MK------EGQPQTDCTSNENKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 678

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 679 KATIEDLLYSEGYLLFYHKQGL 700


>gi|149028472|gb|EDL83857.1| rCG22861 [Rattus norvegicus]
          Length = 489

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 195/506 (38%), Positives = 280/506 (55%), Gaps = 39/506 (7%)

Query: 68  VCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACR 127
           +   + C RL++C++C    C       H+  HA        H +AVD+    ++C  C+
Sbjct: 2   IVKGTCCFRLHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCK 54

Query: 128 DQVYDRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNN 180
           D VYD D +         ++ +Q+S      +++         Y  W     E  L+ +N
Sbjct: 55  DYVYDIDIEQIAKEEQGEALKLQASTSTEFSQQQCSVPSLGEKYPTWETTKPELELLGHN 114

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
                  SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  
Sbjct: 115 PRRRRIASS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMP 167

Query: 241 NGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
           +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD 
Sbjct: 168 SP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDV 226

Query: 301 IHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           +H   + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P
Sbjct: 227 LHRHCKGDDVGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-P 285

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
              +S    S     S N E      S   G++TL  CL RFTRPE LGS  K  C  CQ
Sbjct: 286 GSCTSFWPMSPGRESSLNGE------SHIPGVTTLTDCLRRFTRPEHLGSSAKIKCGSCQ 339

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
             QES KQ++++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS    
Sbjct: 340 SYQESTKQLTMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKETR 397

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWI 538
             G    P     +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA I
Sbjct: 398 MNGQLQLP-----TNSGNN-ENKYSLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDAVI 451

Query: 539 TEVNENTVRAAQGYMMFYVQKMLYYK 564
           T+ +   V  ++GY++FY +++L ++
Sbjct: 452 TKASIKDVLDSEGYLLFYHKQVLEHE 477


>gi|390355680|ref|XP_786312.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
           [Strongylocentrotus purpuratus]
          Length = 538

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 212/571 (37%), Positives = 295/571 (51%), Gaps = 67/571 (11%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+A F    GTKPFR IQ    +         R+  +    C VC   +  RL+AC+ 
Sbjct: 6   CPHVAAFKKSKGTKPFRIIQ-AFFVSCSSVENVKRK--ARAGSCHVCQQCN-QRLHACLT 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+      H+  HA  T     H +AVD+    +FC  C D VYD +F+      
Sbjct: 62  CVFFGCYT---MGHIQDHARSTK----HNLAVDMTHGTVFCVPCGDYVYDSEFE------ 108

Query: 143 HTTSIIQSSKPENLRKRR-----RIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                 Q S+ E L   +        +  W     E  L+  N +        +G    G
Sbjct: 109 ------QISQEERLNCSKFHGSSVQGFSAWEATGYEIELLRRNPT----RKKVSGSSTIG 158

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSD+H   +C+++     CL C++  +F  
Sbjct: 159 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDKH---HCENERSRDNCLVCEMTRVFQE 215

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R  + P + L+  W HA +LA YEQQDAHEFFI+ LD +H   +       +  N
Sbjct: 216 FYSGIRSVHIPYRLLHLVWTHARHLAGYEQQDAHEFFIAALDVLHRHCKGHNGASGNNPN 275

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK------ 371
              CI  ++F+G L+SDV C AC   STT DP  D SLDL P+  S+             
Sbjct: 276 HCNCIIDQIFTGGLQSDVTCQACKGISTTVDPFWDISLDLGPSSSSNSAPLPVPIIVPTP 335

Query: 372 ----SNHSCNCEADGMNSSQNCGISTLMG-------------CLDRFTRPERLGSDQKFF 414
               S  S +  +   +SS + G S LM              CL RFTRPE LGS  K  
Sbjct: 336 LPDFSLDSNSSGSSTSSSSLHNGDSGLMSPPGFDDVPHSLDDCLRRFTRPEYLGSSAKIK 395

Query: 415 CQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS 474
           C  CQ  QES KQ++++ LPLV+CFH+KRFEHSS  +  +K+  ++ FP  LDM PY+S+
Sbjct: 396 CSVCQNYQESTKQLTMKTLPLVACFHLKRFEHSS--RFRKKISTFISFPHELDMTPYMST 453

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKC 533
              R   G    P     SN      +++ LFAVV H G L+AGHY  Y+R   ++W+KC
Sbjct: 454 H--RRANGLSHHP----RSNRTTTSDNQYSLFAVVNHHGSLEAGHYTCYVRQHQDQWFKC 507

Query: 534 DDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           DDA IT+ + + V  ++GY++FY +++L Y+
Sbjct: 508 DDALITKASVHDVLQSEGYLLFYHKRILEYE 538


>gi|449281395|gb|EMC88475.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Columba livia]
          Length = 424

 Score =  321 bits (822), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 184/459 (40%), Positives = 266/459 (57%), Gaps = 42/459 (9%)

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID-----YRPW 167
           A+D+    ++C  C+D +YD+D +            Q +K E  RK  ++      Y  W
Sbjct: 1   AIDLLYGGIYCFMCQDYIYDKDME------------QIAKEEQ-RKAWKLQGIGEKYSTW 47

Query: 168 SPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF 227
            P  RE  L+ +N  P     ++N  +  GLRGL NLGNTCFMN ++QAL HTP LR++F
Sbjct: 48  EPTKRELELLRHN--PKRRKITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFF 103

Query: 228 LSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQ 287
           LSDRH    C+ ++    CL C++ T+F   + G R P+ P + L+  W HA +LA YEQ
Sbjct: 104 LSDRHK---CEMQSPSS-CLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQ 159

Query: 288 QDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTT 346
           QDAHEF I+ LD +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT
Sbjct: 160 QDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTT 219

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            DP  D SLDL  +       S        N E      S   G +TL  CL RFTRPE 
Sbjct: 220 IDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGE------SHVSGTTTLTDCLRRFTRPEH 273

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSL 466
           LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL L
Sbjct: 274 LGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLEL 331

Query: 467 DMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL 526
           DM P+++SS   SR   ++       +++LN   +++ LFAVV H G L++GHY +++R 
Sbjct: 332 DMTPFMASS-KESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQ 385

Query: 527 -SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
             ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 386 HKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 424


>gi|307207001|gb|EFN84824.1| Ubiquitin carboxyl-terminal hydrolase 22 [Harpegnathos saltator]
          Length = 502

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 199/549 (36%), Positives = 287/549 (52%), Gaps = 56/549 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A +R+  S +  C  C ++   RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHAYF-VTSTSTEARVRKAVSCL--CHTC-NTYKDRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+  A     
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDRELLAVAKAQ 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
            + S    S  E         YR W P   E  L+  +  P     + N  +  GLRGL 
Sbjct: 115 WSASAKSLSFGEF--------YRAWEPTQIETELLRKH--PRRRRVAENSTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG+TCFMN ++QAL HTP LR+YFL+DRH   +C        CL C++  +F   + G 
Sbjct: 163 NLGSTCFMNCIVQALIHTPLLRDYFLADRH---HCPQPTR---CLVCEVSHLFQEFYSGS 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           + P +  K L+  W HA +LA YEQQDAHEFFI+ LD +H   E      +   +   CI
Sbjct: 217 KAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKDNPHHCNCI 276

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
             ++F+G L+SDV+C AC   STT DP  D SLDL P  G+S   +S             
Sbjct: 277 IDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAAGASGSDASGPP---------- 326

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                    ++L+ CL+RFTR E LGS  K  C  CQ  QES KQ+++++LP+V+ FH+K
Sbjct: 327 ---------TSLLDCLERFTRAEHLGSTAKIKCSNCQTYQESTKQLTMKQLPIVASFHLK 377

Query: 443 RFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           RFEHSS++   +K+  ++ FP  LDM P++S    +    N     DG   N  +   S+
Sbjct: 378 RFEHSSIQ--DKKISTFISFPEQLDMTPFMSH---KRNGNNNSAMVDGLSKNGEDMTFSD 432

Query: 503 --FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             + LFAV+ H G L+ GHY  ++R   ++W+KCDD  IT      V  ++GY++FY ++
Sbjct: 433 NRYSLFAVINHEGSLETGHYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQ 492

Query: 560 MLYYKASEK 568
           +L Y  + K
Sbjct: 493 ILEYGRNSK 501


>gi|410988678|ref|XP_004000607.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 51-like [Felis catus]
          Length = 667

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 204/562 (36%), Positives = 295/562 (52%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F  A+N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 148 PTGCSHVESFKVAKNWRKNLRLIYQRF---VWSGTPETRKRKAKSCFCHVCS-THMNRLH 203

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 204 SCLSCVFFGCFTEKH-----IH--KHAETKQHNLAVDLYHGVIYCFMCKDYVYDKDIE-- 254

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + L+    I     S D+ ++  M +      S   S        
Sbjct: 255 -------QIAKETKEKILKLLTSI-----STDVSQQQCMTSGVEEKHSTCESKEQEPKLV 302

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 303 KPKKKRRKKSVCTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCVM----TS 358

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 359 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 418

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 419 -RHSKDDSVGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 476

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + S +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 477 SCATFSSQSPEGADSTVSRDDHIP-----GIPSLTDCLQWFTRPEYLGSSAKIKCSSCQS 531

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 532 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KDSR 588

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D     T NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 589 MKEDQPPTDC----TPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 642

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 643 KATIEDLLYSEGYLLFYHKQGL 664


>gi|242005524|ref|XP_002423614.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
           corporis]
 gi|212506774|gb|EEB10876.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
           corporis]
          Length = 477

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 198/539 (36%), Positives = 280/539 (51%), Gaps = 71/539 (13%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H   +  +NG   F++I     +KP   +  I++  +    C VC + S PRL+ C++
Sbjct: 6   CNHFGLYIKKNGLSTFKSIYTYF-VKPSSKKLNIQK--AIFCLCSVCNEHS-PRLHVCLS 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+    + H+  HA   S    H +A+DV+   +FC  C D +Y     +++VL 
Sbjct: 62  CIFFGCY---DTGHIQDHAKNES----HLLALDVNHGHIFCFECGDYIY-----SSIVLK 109

Query: 143 HTTSIIQSSKPENLRKRRRID--YRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
            T +I Q     N  K   +   YR W P + ER LM+ N      + ++      GLRG
Sbjct: 110 LTATINQ-----NWLKSLEMPSIYRSWEPSMAERDLMIKNPKRKRILENTT----IGLRG 160

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLGNTCFMN ++QAL HTP LRNYFL+D H    CQ  +    CL C+L  ++   + 
Sbjct: 161 LINLGNTCFMNCIVQALMHTPLLRNYFLADHH---VCQLADQPGNCLVCELSRLYQEFYS 217

Query: 261 GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC 320
           G + P +  K L+  W  A +LA YEQQDAHEFFI+ LD +H   E  Q   +S     C
Sbjct: 218 GKKNPLTLHKLLHLIWNQARHLAGYEQQDAHEFFIATLDVLHRHCEATQ---KSSNPAKC 274

Query: 321 -CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
            CI  ++F+G L+SDV+C +C   STT DP  D SLDL   Q   +  S  KS       
Sbjct: 275 SCIIDQIFTGGLQSDVVCQSCNNVSTTIDPFWDISLDL--GQSVGLSGSEPKS------- 325

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                         L+ CL+RFTR E LGS  K  C  C+  QES KQ++++KLP+V+ F
Sbjct: 326 --------------LVDCLERFTRAEHLGSTAKIKCNNCKNYQESTKQLTMKKLPVVASF 371

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           H+KRFEHS+  ++ +K+  ++ FP  LDM P++S        GN   P            
Sbjct: 372 HLKRFEHST--RLHKKISTFISFPEHLDMTPFMSHQRNLGGNGNLNNP-----------S 418

Query: 500 SSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           +  + LFAV+ H G LDAGHY  ++R   N W+KCDD  IT  N N V   +  ++  +
Sbjct: 419 AYMYSLFAVINHVGSLDAGHYTAFVRQQKNHWFKCDDHLITRANLNDVLTNKRGLLLRI 477


>gi|156549078|ref|XP_001607506.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nasonia
           vitripennis]
          Length = 513

 Score =  318 bits (816), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 202/553 (36%), Positives = 292/553 (52%), Gaps = 53/553 (9%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A +R+  S +  C  C      RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHS-FFVTSTSNEARVRKAVSCL--CHTCKTYK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+   +V  A
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDREL-LSVAKA 113

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
             +   +S             YR W P + E  L+  N  P       N  +  GLRGL 
Sbjct: 114 QWSETAKSLSLGEF-------YRTWEPSVNEVELLRKN--PRRRRVVENSTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG+TCFMN ++QAL HTP LR+YFL+DRH   +C   N    CL C++ ++F   + G+
Sbjct: 163 NLGSTCFMNCIVQALIHTPLLRDYFLADRH---HCPQPNR---CLVCEVSSLFQEFYSGN 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK-DQHKP---RSQGNG 318
           + P    K L+  W HA +LA YEQQDAHEFFI+ LD +H   E+  Q  P   +   + 
Sbjct: 217 KAPLILHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEQYSQAAPLIVKDNPHH 276

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
             CI  ++F+G L+SDV+C AC   STT DP  D SLDL P   SS              
Sbjct: 277 CNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAAVSS-------------- 322

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
              GM +  +   ++L+ CL+RFTR E LGS  K  C  CQ  QES KQ+++++LP+V+ 
Sbjct: 323 STSGMANDGSSAPTSLLDCLERFTRAEHLGSSAKIKCNNCQTYQESTKQLTMKQLPIVAS 382

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
           FH+KRFEHSS++   +K+  ++ FP  LDM P++S     +   +   P  G   N  + 
Sbjct: 383 FHLKRFEHSSIQ--DKKISTFISFPEQLDMTPFMSHRRNGNNNSSSVAP-TGLHKNGEDP 439

Query: 499 PSSE--FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMF 555
             S+  + LFAV+ H G L+ GHY  ++R   ++W+KCDD  IT      V  ++GY++F
Sbjct: 440 AFSDNRYSLFAVINHEGSLETGHYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLF 499

Query: 556 YVQKMLYYKASEK 568
           Y +++L Y  + K
Sbjct: 500 YHKQILEYGRNSK 512


>gi|321477460|gb|EFX88419.1| hypothetical protein DAPPUDRAFT_305599 [Daphnia pulex]
          Length = 513

 Score =  318 bits (815), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 198/553 (35%), Positives = 289/553 (52%), Gaps = 57/553 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  GT+P+R I     +      A  R+  S V  C VC     PRL+AC+ 
Sbjct: 7   CLHLNNFKAAKGTRPYRLIHS-FFVACTSSEARKRKAKSCV--CHVCQRRG-PRLHACLH 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+    + H+  H+ +      H +AVD+    + C  C D VYDR+ +  +   
Sbjct: 63  CIFFGCY---GAGHIQAHSQQRK----HFLAVDLTYGVVCCFQCGDYVYDRELET-IAQK 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
           H T    S     +       Y  W P   E  L+  +        S+      GLRGL 
Sbjct: 115 HQTKASLSLGLGQV-------YHSWEPSEEEIELLKKHTRRKKITDSAT----IGLRGLV 163

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLGNTCFMN ++QAL   P LR++FLSDRH    CQ ++    CL C++  +F   + G+
Sbjct: 164 NLGNTCFMNCIVQALLKVPLLRDFFLSDRH---ICQFQDEPSRCLVCEISRLFQEFYSGN 220

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV----EKDQHKPRSQGNG 318
           + P +  + L+  W HA +LA YEQQDAHEFFI+ LD +H       E+   +P+     
Sbjct: 221 KAPLTLHRLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCRGPNEQQSTQPQENSVN 280

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            C CI  ++F+G L+SDV+C AC   STT DP  D SLDL P+  + + T+         
Sbjct: 281 RCTCIIDQIFTGGLQSDVVCQACHGVSTTVDPFWDISLDLGPSPSTKVVTT--------- 331

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
              +G  S      ++L  CL+RFTR E LGS  K  C +C   QES KQ++++KLP+V+
Sbjct: 332 --GNGPGSIP----TSLQDCLERFTRAEHLGSSAKIKCSRCLSYQESTKQLTMKKLPVVA 385

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT-- 495
            FH+KRFEHS+  +  +K+  ++ FP  LDM+P++S    R    N       D S+   
Sbjct: 386 SFHLKRFEHSN--RFHKKISSFIAFPEYLDMSPFMSH---RRNINNNVNSDSPDRSDRPV 440

Query: 496 ---LNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQG 551
              L    + + LFAV+ H G ++AGHY  Y+R   + W+KCDD  IT+ +   V  ++G
Sbjct: 441 HKPLISTENMYSLFAVINHVGTIEAGHYTAYIRQHRDHWFKCDDHLITKADIRDVLQSEG 500

Query: 552 YMMFYVQKMLYYK 564
           Y++FY + +L Y+
Sbjct: 501 YLLFYHKMILEYE 513


>gi|441677858|ref|XP_003281169.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Nomascus
           leucogenys]
          Length = 649

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 195/511 (38%), Positives = 274/511 (53%), Gaps = 46/511 (9%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 142 VAPPGCSHLGSFKVDNWKQNLRAIYQCFVWS---GTAEARKRKAKSCICHVCG-VHLNRL 197

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 198 HSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDME- 249

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                    +I   +     K + +   +  W P  RE  L+ +N  P     +SN  + 
Sbjct: 250 ---------MIAKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI- 297

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F
Sbjct: 298 -GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLF 352

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++ 
Sbjct: 353 QEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 412

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S     +
Sbjct: 413 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGN 472

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
             N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP
Sbjct: 473 VVNGE------SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLP 526

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       ++
Sbjct: 527 IVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSK-ESRMNGQY----QQPTD 579

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
           +LN   +++ LFAVV H G L++GHY +++R
Sbjct: 580 SLNN-DNKYSLFAVVNHQGTLESGHYTSFIR 609


>gi|355570597|gb|EHH25672.1| hypothetical protein EGK_21141 [Macaca mulatta]
          Length = 635

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 203/564 (35%), Positives = 293/564 (51%), Gaps = 70/564 (12%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 117 PTGCSHVESFKVGKNWQKNLRLIYQRF---VWSGTPETRKRKAKSCICHVCS-THMNRLH 172

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVDV    ++C  C+D VYD+D +  
Sbjct: 173 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDVYHGVIYCFMCKDYVYDKDIE-- 223

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 224 -------QIAKETKEKILRLTST------STDVSHQQFMTSGTEDKQSTCETKEQEPKLV 270

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 271 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 326

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 327 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 386

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 387 -RHSKDDSGVQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 444

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQN--CGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
             ++  + + +        ADG  S  +   GI +L  CL  FTRPE LGS  K  C  C
Sbjct: 445 SCATFDSQNPE-------RADGTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSC 497

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
           Q  QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   
Sbjct: 498 QSYQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KE 554

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAW 537
           SR      P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA 
Sbjct: 555 SRMKEGQPPADC----VPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAI 608

Query: 538 ITEVNENTVRAAQGYMMFYVQKML 561
           IT+     +  ++GY++FY ++ L
Sbjct: 609 ITKATIEDLLYSEGYLLFYHKQGL 632


>gi|402914074|ref|XP_003919460.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Papio
           anubis]
          Length = 756

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 203/564 (35%), Positives = 293/564 (51%), Gaps = 70/564 (12%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 238 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVC-STHMNRLH 293

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVDV    ++C  C+D VYD+D +  
Sbjct: 294 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDVYHGVIYCFMCKDYVYDKDIE-- 344

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 345 -------QIAKETKEKILRLTST------STDVSHQQFMTSGTEDKQSTCETKEQEPKLV 391

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 392 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 447

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 448 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 507

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 508 -RHSKDDSGVQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 565

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQN--CGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
             ++  + + +        ADG  S  +   GI +L  CL  FTRPE LGS  K  C  C
Sbjct: 566 SCATFDSQNPE-------RADGTVSRDHHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSC 618

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
           Q  QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   
Sbjct: 619 QSYQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KE 675

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAW 537
           SR      P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA 
Sbjct: 676 SRMKEGQPPAD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAI 729

Query: 538 ITEVNENTVRAAQGYMMFYVQKML 561
           IT+     +  ++GY++FY ++ L
Sbjct: 730 ITKATIEDLLYSEGYLLFYHKQGL 753


>gi|109132984|ref|XP_001100790.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 1
           [Macaca mulatta]
 gi|109132986|ref|XP_001100883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2
           [Macaca mulatta]
          Length = 710

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 203/564 (35%), Positives = 293/564 (51%), Gaps = 70/564 (12%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 192 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVC-STHMNRLH 247

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVDV    ++C  C+D VYD+D +  
Sbjct: 248 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDVYHGVIYCFMCKDYVYDKDIE-- 298

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 299 -------QIAKETKEKILRLTST------STDVSHQQFMTSGTEDKQSTCETKEQEPKLV 345

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 346 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 401

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 402 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 461

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 462 -RHSKDDSGVQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 519

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQN--CGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
             ++  + + +        ADG  S  +   GI +L  CL  FTRPE LGS  K  C  C
Sbjct: 520 SCATFDSQNPE-------RADGTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSC 572

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
           Q  QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   
Sbjct: 573 QSYQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KE 629

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAW 537
           SR      P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA 
Sbjct: 630 SRMKEGQPPAD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAI 683

Query: 538 ITEVNENTVRAAQGYMMFYVQKML 561
           IT+     +  ++GY++FY ++ L
Sbjct: 684 ITKATIEDLLYSEGYLLFYHKQGL 707


>gi|432956682|ref|XP_004085735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like, partial
           [Oryzias latipes]
          Length = 421

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 183/456 (40%), Positives = 257/456 (56%), Gaps = 40/456 (8%)

Query: 114 VDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDL 171
           VD+    ++C  C+D VYDR+ +           I   + +   K + I   +  W P  
Sbjct: 1   VDLLYGGVYCFLCQDYVYDREMEQ----------IAKEEQKKAWKMQGIGEKFSSWEPTR 50

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR 231
           RE  L+ +N  P     ++N  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDR
Sbjct: 51  REVELLRHN--PKRRRITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDR 106

Query: 232 HNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAH 291
           H    C+  +    CL C++  +F   + G R P+ P + L+  W HA +LA YEQQDAH
Sbjct: 107 HK---CEMASSS--CLVCEMSQLFQEFYSGHRSPHVPFRLLHLVWTHARHLAGYEQQDAH 161

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
           EF I+ LD +H   + D  K  S  N   CI  ++F+G L+SDV C  C   STT DP  
Sbjct: 162 EFLIAALDVLHRHCKDDSGKRTSNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFW 221

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLDL  +       S      + N E  G       G + L  CL RFTRPE LGS  
Sbjct: 222 DISLDLPGSSTPFWPLSPEGEVSALNRETPG------SGATALTDCLRRFTRPEHLGSSA 275

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPY 471
           K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+
Sbjct: 276 KIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPF 333

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSE--FELFAVVTHTGKLDAGHYVTYLRL-SN 528
           ++SS  +          +G    T +  SS+  + LFAVV H G L++GHY T++R   +
Sbjct: 334 MASSKEKR--------MNGQNQQTADAFSSDNRYSLFAVVNHQGTLESGHYTTFIRQHKD 385

Query: 529 KWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           +W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 386 QWFKCDDAVITKASLEEVLDSEGYLLFYHKQFLEYE 421


>gi|149758441|ref|XP_001487991.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Equus
           caballus]
          Length = 727

 Score =  315 bits (806), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 198/557 (35%), Positives = 289/557 (51%), Gaps = 66/557 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F  A+N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 209 PSGCSHVESFKVAKNWQKNLRLIYQRFVW---SGTPETRKRKAKSCICHVCS-THMNRLH 264

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYDRD +  
Sbjct: 265 SCLSCVFFGCFTEKH-----IH--KHAETKQHNLAVDLYHGVVYCFMCKDYVYDRDIE-- 315

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSM----------- 187
                   I + +K + L+    I     S D+ ++  M +      ++           
Sbjct: 316 -------QIAKETKGKILKLLISI-----STDVSQQQCMTSGVEEKQTICELKEQEPKLV 363

Query: 188 -----SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 364 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 419

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 420 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 479

Query: 303 EKVEKDQHKPRSQGNGDC--CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +C  CI  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 480 -RHSKDDSVGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 537

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + S +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 538 SYATFGSQSPERADSTVSRDDHVP-----GIPSLTDCLQWFTRPEHLGSSAKIKCSSCQS 592

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 593 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KDSR 649

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                   +G          +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 650 -------MEGQLPTDCAPNENKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAVIT 702

Query: 540 EVNENTVRAAQGYMMFY 556
           +     +  ++GY++FY
Sbjct: 703 KATIEDLLYSEGYLLFY 719


>gi|114688817|ref|XP_521085.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2 [Pan
           troglodytes]
          Length = 711

 Score =  314 bits (805), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 200/562 (35%), Positives = 291/562 (51%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 192 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVC-STHMNRLH 247

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 248 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIE-- 298

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 299 -------QIAKETKEKILRLLTST-----STDVSHQQFMTSGFEDKQSTCETKEQEPKLV 346

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 347 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 402

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 403 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 462

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 520

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 521 SCATFDSQNPERADSAVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQS 575

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 576 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESR 632

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 633 MKEGQPPTD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 686

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 687 KATIEDLLYSEGYLLFYHKQGL 708


>gi|41152235|ref|NP_958443.1| ubiquitin carboxyl-terminal hydrolase 51 [Homo sapiens]
 gi|52000873|sp|Q70EK9.1|UBP51_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 51; AltName:
           Full=Deubiquitinating enzyme 51; AltName: Full=Ubiquitin
           thioesterase 51; AltName:
           Full=Ubiquitin-specific-processing protease 51
 gi|40788183|emb|CAE47750.2| ubiquitin specific proteinase 51 [Homo sapiens]
 gi|47174857|tpe|CAE48396.2| TPA: ubiquitin specific protease-51 [Homo sapiens]
 gi|225000462|gb|AAI72281.1| Ubiquitin specific peptidase 51 [synthetic construct]
          Length = 711

 Score =  314 bits (804), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 200/562 (35%), Positives = 291/562 (51%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 192 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVC-STHMNRLH 247

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 248 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIE-- 298

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 299 -------QIAKETKEKILRLLTST-----STDVSHQQFMTSGFEDKQSTCETKEQEPKLV 346

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 347 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 402

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 403 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 462

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 520

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 521 SCATFDSQNPERADSTVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQS 575

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 576 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESR 632

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 633 MKEGQPPTD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 686

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 687 KATIEDLLYSEGYLLFYHKQGL 708


>gi|426396116|ref|XP_004064301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Gorilla
           gorilla gorilla]
          Length = 648

 Score =  314 bits (804), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 200/562 (35%), Positives = 291/562 (51%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 129 PTGCSHVESFKVGKNWQKNLRLIYQRF---VWSGTPETRKRKAKSCICHVC-STHMNRLH 184

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 185 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIE-- 235

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 236 -------QIAKETKEKILRLLTST-----STDVSHQQFMTSGFEDKQSTCETKEQEPKLV 283

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 284 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 339

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 340 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 399

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 400 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 457

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 458 SCATFDSQNPERADSTVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQS 512

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 513 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESR 569

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 570 MKEGQPPTD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 623

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 624 KATIEDLLYSEGYLLFYHKQGL 645


>gi|291407536|ref|XP_002720078.1| PREDICTED: ubiquitin thiolesterase 3-like [Oryctolagus cuniculus]
          Length = 706

 Score =  314 bits (804), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 196/555 (35%), Positives = 291/555 (52%), Gaps = 53/555 (9%)

Query: 20  PQPCPHLADFHA-RNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 189 PTGCCHVESFKVTKNWQKNLRLIYQRFVW---SGTPETRKRKAKSCICHVCS-THMNRLH 244

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 245 SCLSCVFFGCFTEKH-----IH--KHAETKQHNLAVDLYYGVIYCFMCKDYVYDKDIE-- 295

Query: 139 VVLAHTTSIIQSSKPENLRKRRRID---YRPWSPDLRERSLMVNNASP------IDSMSS 189
                   I + +K + L+     D    +  + ++ E+ L   +               
Sbjct: 296 -------QIAKETKEKILKLLTSTDSSHQQFITSEVEEKQLTCESKEQEPKLVKPKKKRR 348

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL H P L+++FLS++H            LCL C
Sbjct: 349 KKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSNKHKCIM----TSPSLCLVC 404

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H +  KD 
Sbjct: 405 EMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH-RHSKDD 463

Query: 310 HKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
              +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P   ++   
Sbjct: 464 SVGQESSNSNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PGSCATFSP 522

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            +T+   S    AD +      GI +L  CL  FTRPE LGS  K  C  CQ  QES KQ
Sbjct: 523 QNTEMADSTMSRADHIP-----GIPSLTDCLQWFTRPEDLGSSAKIKCSSCQSYQESTKQ 577

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR       
Sbjct: 578 LTMKKLPMVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESRMK----- 629

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTV 546
            +   S       +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT+     +
Sbjct: 630 -ECQPSTDCVSNENKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIITKATIEDL 688

Query: 547 RAAQGYMMFYVQKML 561
             ++GY++FY ++ L
Sbjct: 689 LYSEGYLLFYHKQGL 703


>gi|397465305|ref|XP_003804442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pan paniscus]
          Length = 687

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 200/562 (35%), Positives = 291/562 (51%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 168 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVC-STHMNRLH 223

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 224 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIE-- 274

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 275 -------QIAKETKEKILRLLTST-----STDVSHQQFMTSGFEDKQSTCETKEQEPKLV 322

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 323 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 378

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 379 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 438

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 439 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 496

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 497 SCATFDSQNPERADSAVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQS 551

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 552 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESR 608

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 609 MKEGQPPTD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 662

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 663 KATIEDLLYSEGYLLFYHKQGL 684


>gi|307173655|gb|EFN64504.1| Ubiquitin carboxyl-terminal hydrolase 22 [Camponotus floridanus]
          Length = 507

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 195/552 (35%), Positives = 282/552 (51%), Gaps = 57/552 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A +R+  S +  C +C      RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHSYF-VTSTSTEARVRKAVSCL--CHICKTHK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C++     H+  HA KT     H +AVD+    + C  C D VYDR+  A     
Sbjct: 62  CIFFGCYI---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDRELLAVAKAQ 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
            + S    S  E         YR W P   E  L+     P       N  +  GLRGL 
Sbjct: 115 WSESAKSLSFGEF--------YRAWEPTQIEAELL--RKHPRRRRVVENTTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG TCFMN ++Q L HTP LR+YFL+DRH   +C   +    CL C++  +F   + G+
Sbjct: 163 NLGQTCFMNCIVQVLIHTPLLRDYFLADRH---HCPQPSR---CLVCEVSHLFQEFYSGN 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           + P +  K L+  W H  +LA YEQQDAHEFFI+ LD +H   E      +   +   CI
Sbjct: 217 KAPLTLHKLLHLIWTHVKHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKDNPHHCNCI 276

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
             ++F+G L+SDV+C  C   STT DP  D SLDL P                    AD 
Sbjct: 277 IDQIFTGGLQSDVVCQVCNGVSTTIDPFWDISLDLGP-------------------AADS 317

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
             S ++   ++L+ CL+RFTR E LGS  K  C  C+  QES KQ+++++LP+V+ FH+K
Sbjct: 318 SGSDKSGLPTSLLDCLERFTRAEHLGSTVKIKCSNCETYQESTKQLTMKQLPIVASFHLK 377

Query: 443 RFEHSSVRK---MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           RFEHSS++       K+  ++ FP  LDM P++S    +    N     DG   N  N  
Sbjct: 378 RFEHSSIQDKICKKEKISTFISFPEQLDMTPFMSH---KRNGNNNSAMIDGLFKNGENLT 434

Query: 500 SSE--FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            S+  + LFAV+ H G L+ GHY  ++R   ++W+KCDD  IT+     V  ++GY++FY
Sbjct: 435 FSDNRYSLFAVINHKGSLETGHYTAFIRQQRDQWFKCDDHLITKARLKDVLTSEGYLLFY 494

Query: 557 VQKMLYYKASEK 568
            +++L Y  + K
Sbjct: 495 HKQILEYGRNNK 506


>gi|332266327|ref|XP_003282162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Nomascus
           leucogenys]
          Length = 711

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 200/562 (35%), Positives = 291/562 (51%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 192 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVC-STHMNRLH 247

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 248 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIE-- 298

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S   +        
Sbjct: 299 -------QIAKETKEKILRLLTST-----STDVSHQQFMTSGFEDKQSTCETKEQEPKLV 346

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 347 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 402

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 403 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 462

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 520

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 521 SCATFDSQNPERADSTVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQS 575

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 576 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KDSR 632

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 633 MKEGQPPTD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 686

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 687 KATIEDLLYSEGYLLFYHKQGL 708


>gi|383865627|ref|XP_003708274.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Megachile
           rotundata]
          Length = 502

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 198/550 (36%), Positives = 286/550 (52%), Gaps = 58/550 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A +R+  S +  C  C      RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHSYF-VTSTSTEARVRKAVSCL--CHTCKTYK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+        
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDREL------- 107

Query: 143 HTTSIIQSSKPENLRKRRRID-YRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGL 201
              ++ +S   E+ +     + YR W P   E  L+  +  P       N  +  GLRGL
Sbjct: 108 --LTVAKSQWSESAKSLSFGEFYRAWEPTQIEAELLRKH--PRRRRVVENSTI--GLRGL 161

Query: 202 NNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCG 261
            NLG+TCFMN ++QAL HTP LR+YFL+DRH   +C        CL C++  +F   + G
Sbjct: 162 INLGSTCFMNCIVQALIHTPLLRDYFLADRH---HCPQPTR---CLVCEVSHLFQEFYSG 215

Query: 262 DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCC 321
            + P +  K L+  W HA +LA YEQQDAHEFFI+ LD +H   E      +   +   C
Sbjct: 216 SKAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKDNPHHCNC 275

Query: 322 IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEAD 381
           I  ++F+G L+SDV+C AC   STT DP  D SLDL P   +S   SS            
Sbjct: 276 IIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPP--------- 326

Query: 382 GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHI 441
                     ++L+ CL+RFTR E LGS  K  C  CQ  QES KQ+++++LP+V+ FH+
Sbjct: 327 ----------TSLLDCLERFTRAEHLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHL 376

Query: 442 KRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           KRFEHSS++   +K+  ++ FP  LDM P++S    R    N     DG   N  +   S
Sbjct: 377 KRFEHSSIQ--DKKISTFISFPEQLDMTPFMSH---RRNGNNNSAMMDGLAKNGEDMAFS 431

Query: 502 E--FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           +  + LFAV+ H G L+ GHY  ++R   ++W+KCDD  IT      V  ++GY++FY +
Sbjct: 432 DNRYSLFAVINHEGSLETGHYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHK 491

Query: 559 KMLYYKASEK 568
           ++L Y  + K
Sbjct: 492 QILEYGRNTK 501


>gi|66534853|ref|XP_395389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Apis
           mellifera]
          Length = 502

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 200/549 (36%), Positives = 282/549 (51%), Gaps = 56/549 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A IR+  S +  C  C      RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHSYF-VTSTSTEARIRKAVSCL--CHTCKTYK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+        
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDRELLGVAKAQ 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
            + S    S  E         YR W P   E  L+  +  P       N  +  GLRGL 
Sbjct: 115 WSESAKSLSFGEF--------YRAWEPTQIEAELLRKH--PRRRRVVENSTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG+TCFMN ++QAL HTP LR+YFL+DRH   +C        CL C++  +F   + G 
Sbjct: 163 NLGSTCFMNCIVQALIHTPLLRDYFLADRH---HCPQPTR---CLVCEVSHLFQEFYSGS 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           + P +  K L+  W HA +LA YEQQDAHEFFI+ LD +H   E      +   +   CI
Sbjct: 217 KAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILIKDNPHHCNCI 276

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
             ++F+G L+SDV+C AC   STT DP  D SLDL P   +S   SS             
Sbjct: 277 IDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPP---------- 326

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                    ++L+ CL+RFTR E LGS  K  C  CQ  QES KQ+++++LP+V+ FH+K
Sbjct: 327 ---------TSLLDCLERFTRAEHLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLK 377

Query: 443 RFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           RFEHSS++   +K+  ++ FP  LDM P++S    R    N     DG   N  +   S+
Sbjct: 378 RFEHSSIQ--DKKISTFISFPEQLDMTPFMSH---RRNGNNNSAMIDGLPKNGEDMAFSD 432

Query: 503 --FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             + LFAV+ H G L+ GHY  ++R   ++W+KCDD  IT      V  ++GY++FY ++
Sbjct: 433 NRYSLFAVINHEGSLETGHYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQ 492

Query: 560 MLYYKASEK 568
           +L Y  + K
Sbjct: 493 ILEYGRNTK 501


>gi|340724718|ref|XP_003400728.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Bombus
           terrestris]
 gi|350398221|ref|XP_003485124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Bombus
           impatiens]
          Length = 502

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 200/549 (36%), Positives = 283/549 (51%), Gaps = 56/549 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A +R+  S +  C  C      RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHSYF-VTSTSTEARVRKAVSCL--CHTCKTYK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+  A     
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDRELLAVAKAQ 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
            + S    S  E         YR W P   E  L+  +  P       N  +  GLRGL 
Sbjct: 115 WSESAKSLSFGEF--------YRSWEPTQIEAELLRKH--PRRRRVVENSTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG+TCFMN ++QAL HTP LR+YFL+DRH   +C        CL C++  +F   + G 
Sbjct: 163 NLGSTCFMNCIVQALIHTPLLRDYFLADRH---HCPQPTR---CLVCEVSHLFQEFYSGS 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           + P +  K L+  W HA +LA YEQQDAHEFFI+ LD +H   E      +   +   CI
Sbjct: 217 KAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKDNPHHCNCI 276

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
             ++F+G L+SDV+C AC   STT DP  D SLDL P   +S   SS             
Sbjct: 277 IDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPP---------- 326

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                    ++L+ CL+RFTR E LGS  K  C  CQ  QES KQ+++++LP+V+ FH+K
Sbjct: 327 ---------TSLLDCLERFTRAEHLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLK 377

Query: 443 RFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           RFEHSS++   +K+  ++ FP  LDM P++S    R    N     DG   N  +   S+
Sbjct: 378 RFEHSSIQ--DKKICTFISFPEQLDMTPFMSH---RRNGNNNSAMIDGLPKNGEDMAFSD 432

Query: 503 --FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             + LFAV+ H G L+ GHY  ++R   ++W+KCDD  IT      V  ++GY++FY ++
Sbjct: 433 NRYSLFAVINHEGSLETGHYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQ 492

Query: 560 MLYYKASEK 568
           +L Y  + K
Sbjct: 493 ILEYGRNTK 501


>gi|223005912|ref|NP_001138547.1| ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
 gi|296470746|tpg|DAA12861.1| TPA: ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
          Length = 438

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 186/452 (41%), Positives = 259/452 (57%), Gaps = 34/452 (7%)

Query: 126 CRDQVYDRDFD--------AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLM 177
           C+D VYDRD +         A+ L  +TS   S +  ++       Y  W     E  L+
Sbjct: 2   CKDYVYDRDIEQIAKEEQGEALKLQASTSTEVSHQQYSVPGLGE-KYPTWETTKPELELL 60

Query: 178 VNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC 237
            +N       SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C
Sbjct: 61  GHNPRRRRIASS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---C 113

Query: 238 QSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
           +  +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ 
Sbjct: 114 EMPSP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAA 172

Query: 298 LDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLD 356
           LD +H   + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLD
Sbjct: 173 LDVLHRHCKGDDAGKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLD 232

Query: 357 LEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQ 416
           L P   +S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C 
Sbjct: 233 L-PGSCTSFWPMSPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCG 285

Query: 417 QCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI 476
            CQ  QES KQ+++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS 
Sbjct: 286 SCQSYQESTKQLTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSK 343

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDD 535
                G    P     +N+ N+  +++ LFAVV H G L++GHY +++R   ++W+KCDD
Sbjct: 344 ESRMNGQLQLP-----TNSGND-ENKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDD 397

Query: 536 AWITEVNENTVRAAQGYMMFYVQKMLYYKASE 567
           A IT+ +   V  ++GY++FY +++L +++ +
Sbjct: 398 AVITKASIKDVLDSEGYLLFYHKQVLEHESEK 429


>gi|297710131|ref|XP_002831758.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pongo abelii]
          Length = 711

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 199/562 (35%), Positives = 289/562 (51%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 192 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVC-STHMNRLH 247

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D +  
Sbjct: 248 SCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDIE-- 298

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN----------------AS 182
                   I + +K + LR          S D+  +  M +                   
Sbjct: 299 -------QIAKETKEKILRLLTST-----STDVSHQQFMTSGFEDKQLTCETKEQEPKLV 346

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 347 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 402

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 403 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 462

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P 
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PG 520

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 521 SCATFDSQNPERADSTVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQS 575

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 576 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESR 632

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 633 MKEGQPPTD----CVPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 686

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 687 KATIEDLLYSEGYLLFYHKQGL 708


>gi|403307110|ref|XP_003944051.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Saimiri
           boliviensis boliviensis]
          Length = 674

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 198/562 (35%), Positives = 290/562 (51%), Gaps = 65/562 (11%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 155 PTGCSHVESFKVGKNWQKNLRLIYQRFVW---SGTPETRKRKAKSCICHVCS-THMNRLH 210

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +  
Sbjct: 211 SCLSCVFFGCFT---EKHIHRHAETKQ----HHLAVDLYHGVIYCFMCKDYVYDKDIE-- 261

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      S+  +        
Sbjct: 262 -------QIAKETKEKILRFLTST-----STDVSHQQFMTSGIEDKQSICETKEQEPKLV 309

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 310 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 365

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 366 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 425

Query: 303 EKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +CC  I  ++F+G L+SDV C  C   STT DPC D SLDL P 
Sbjct: 426 -RHSKDDSGGQETNNPNCCNCIIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDL-PG 483

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
             ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  CQ 
Sbjct: 484 SCATFDSQNPERAGSTVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQS 538

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR
Sbjct: 539 YQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESR 595

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWIT 539
                 P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT
Sbjct: 596 MKEGQPPTDC----VPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIIT 649

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
           +     +  ++GY++FY ++ L
Sbjct: 650 KATIEDLLYSEGYLLFYHKQGL 671


>gi|380022381|ref|XP_003695028.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 22-like [Apis florea]
          Length = 502

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 199/549 (36%), Positives = 281/549 (51%), Gaps = 56/549 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL  F A  G +P++ I     +      A +R+  S +  C  C      RL++C+ 
Sbjct: 6   CIHLNXFKAAKGIQPYKVIHSYF-VTSTSTEARVRKAVSCL--CHTCKTYK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+        
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDRELLGVAKAQ 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
            + S    S  E         YR W P   E  L+  +  P       N  +  GLRGL 
Sbjct: 115 WSESAKSLSFGEF--------YRAWEPTQIEAELLRKH--PRRRRVVENSTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG+TCFMN ++QAL HTP LR+YFL+DRH   +C        CL C++  +F   + G 
Sbjct: 163 NLGSTCFMNCIVQALIHTPLLRDYFLADRH---HCPQPTR---CLVCEVSHLFQEFYSGS 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           + P +  K L+  W HA +LA YEQQDAHEFFI+ LD +H   E      +   +   CI
Sbjct: 217 KAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILIKDNPHHCNCI 276

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
             ++F+G L+SDV+C AC   STT DP  D SLDL P   +S   SS             
Sbjct: 277 IDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPP---------- 326

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                    ++L+ CL+RFTR E LGS  K  C  CQ  QES KQ+++++LP+V+ FH+K
Sbjct: 327 ---------TSLLDCLERFTRAEHLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLK 377

Query: 443 RFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           RFEHSS++   +K+  ++ FP  LDM P++S    R    N     DG   N  +   S+
Sbjct: 378 RFEHSSIQ--DKKISTFISFPEQLDMTPFMSH---RRNGNNNSAMIDGLPKNGEDMAFSD 432

Query: 503 --FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             + LFAV+ H G L+ GHY  ++R   ++W+KCDD  IT      V  ++GY++FY ++
Sbjct: 433 NRYSLFAVINHEGSLETGHYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQ 492

Query: 560 MLYYKASEK 568
           +L Y  + K
Sbjct: 493 ILEYGRNTK 501


>gi|357626409|gb|EHJ76510.1| putative Ubiquitin carboxyl-terminal hydrolase 22 [Danaus
           plexippus]
          Length = 487

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 190/553 (34%), Positives = 283/553 (51%), Gaps = 87/553 (15%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  GT P++ +     +      A  RR  +    C  CG +  PR+++C+ 
Sbjct: 6   CIHLNNFKAAKGTNPYKIVH-AFFVSCTSYEA--RRYKATSCLCFTCGKAG-PRMHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C   +C+    + H+  H    S +  H + VD+    +FC  C+D +YDR+        
Sbjct: 62  CIFFACY----NGHIQDH----SKSKKHFLYVDLSYGNVFCAQCQDYIYDRE-------- 105

Query: 143 HTTSIIQSSKPENLRKRR----RIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGL 198
               + + S+   L++ +     + Y PW P+  E  +M         + S +  +  GL
Sbjct: 106 ----LTELSRNYRLKEAKALGISVPYTPWLPNNNE--VMALRRLRKRRLISPHTTI--GL 157

Query: 199 RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAI 258
           RGL NLG+TCFMN ++Q L HTP LR+YFL ++H    C+++ G   CL C++  +F   
Sbjct: 158 RGLQNLGSTCFMNCIVQTLIHTPLLRDYFLGEKHK---CKTQ-GSGKCLVCEVSKLFQEF 213

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
           + G + P +  + L+  W HA +LA YEQQDAHEFFI+ LD +H            + NG
Sbjct: 214 YSGAKTPLTLHRLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCMNGVEDTEKKENG 273

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            C CI  ++F+G L+SDV+C +C   STT DP  D SLD+                    
Sbjct: 274 RCNCIIDQIFTGGLQSDVVCTSCSGVSTTIDPFWDISLDVA------------------- 314

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                       G  +L  CL+RFTR E LGS  K  C  C+  +ES KQ+++  LP+V+
Sbjct: 315 ------------GPGSLQACLERFTRAEHLGSAAKIKCSNCRAYRESTKQLTLETLPIVA 362

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            FH+KRFEHSS  ++ RK+  ++ FP  LDM P++S+        +R      D +N   
Sbjct: 363 SFHLKRFEHSS--QIDRKISAFVSFPAELDMTPFMST--------HRRAVEAADNNNA-- 410

Query: 498 EPSSEFE-----LFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQG 551
            P   FE     LFAVV H G LDAGHY  Y+R +   W+KCDD  IT  +   V  ++G
Sbjct: 411 -PEGVFEDNRYSLFAVVNHLGSLDAGHYTAYVRQMKGSWFKCDDHMITRASLREVLDSEG 469

Query: 552 YMMFYVQKMLYYK 564
           Y++FY + +L Y+
Sbjct: 470 YLLFYHKTVLEYE 482


>gi|405953224|gb|EKC20928.1| Ubiquitin carboxyl-terminal hydrolase 22 [Crassostrea gigas]
          Length = 534

 Score =  311 bits (796), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 198/563 (35%), Positives = 297/563 (52%), Gaps = 56/563 (9%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCP--RLYAC 80
           C H+ ++ ++ GT  FR I     I      A  R+  S     GVC     P  RL+AC
Sbjct: 6   CGHITEYKSKYGTNQFRIIHAYF-IAASSDNARRRKGKS-----GVCHTCRFPSFRLHAC 59

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C    C+   H     IH    S   +H +A D+    +FC  C D VYD++ ++   
Sbjct: 60  LYCVYFGCYTTKH-----IHEHAFSK--NHNLAADMTYGTIFCFECGDYVYDKELES--- 109

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                + IQ+ K       +  ++  W P   E  ++  N       + S      GLRG
Sbjct: 110 ----IAQIQNEKAAKSLGLKSYNFIAWEPSEVEVEILRQNPKRRKVENKST----IGLRG 161

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ-SKNGVRLCLACDLDTMFSAIF 259
           L NLGNTCFMN ++Q+L HTP LR++FL+D+HN   CQ +    + CL C++  +F   +
Sbjct: 162 LINLGNTCFMNCIVQSLIHTPVLRDFFLADKHN---CQMTSVEAQQCLVCEMARLFQEFY 218

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH--------------EKV 305
            G+R P+ P + L+  W +A +LA YEQQDAHEF I+ LD +H               K 
Sbjct: 219 SGNRTPHIPYRLLHLVWTNARHLAGYEQQDAHEFLIAALDVLHRHCKGYSDNKCLSINKF 278

Query: 306 EKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
              ++   S     C CI  ++F+G L+SDV C  C   STT DP  D SLDL P  G+ 
Sbjct: 279 FTGRNGMTSGNPHHCNCIIDQIFTGGLQSDVTCQECNNVSTTIDPIWDISLDLGP--GAP 336

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGIST-LMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           +  +    N+S +  + G ++S      T L+ CL RFT+PE LGS  K  C  C   QE
Sbjct: 337 IPNALLNVNNSSSSPSSGFSNSPGTYEPTSLLDCLKRFTKPEHLGSSAKIKCSTCHSYQE 396

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR-FG 482
           S KQ++++KLP+V+CFH+KRFEHS+   + +K+  ++ FP  LDM P++SSS   +  + 
Sbjct: 397 STKQLTMKKLPIVACFHLKRFEHST--GLHKKISTFVSFPEELDMTPFMSSSRNNTNGYR 454

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEV 541
           N+       ES       +++ LFAVV H G ++ GHY  ++R   ++W+KCDD  IT+ 
Sbjct: 455 NQIV----QESAKGLSCDNKYSLFAVVNHMGTIECGHYTCFIRQHKDQWFKCDDHLITKA 510

Query: 542 NENTVRAAQGYMMFYVQKMLYYK 564
             N V  ++GY++FY +++L Y+
Sbjct: 511 TLNEVLKSEGYLLFYHKQILEYQ 533


>gi|426396114|ref|XP_004064300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Gorilla
           gorilla gorilla]
          Length = 469

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 187/505 (37%), Positives = 272/505 (53%), Gaps = 60/505 (11%)

Query: 76  RLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF 135
           RL++C++C    C    H     IH  K +    H +AVD+    ++C  C+D VYD+D 
Sbjct: 3   RLHSCLSCVFFGCFTEKH-----IH--KHAETKQHHLAVDLYHGVIYCFMCKDYVYDKDI 55

Query: 136 DAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD-- 193
           +          I + +K + LR          S D+  +  M +      S   +     
Sbjct: 56  E---------QIAKETKEKILRLLTST-----STDVSHQQFMTSGFEDKQSTCETKEQEP 101

Query: 194 --------------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
                            GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H       
Sbjct: 102 KLVKPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM--- 158

Query: 240 KNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
                LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD
Sbjct: 159 -TSPSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILD 217

Query: 300 GIHEKVEKDQHKPRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
            +H +  KD    +   N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL
Sbjct: 218 VLH-RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 276

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
            P   ++  + + +   S     D +      GI +L  CL  FTRPE LGS  K  C  
Sbjct: 277 -PGSCATFDSQNPERADSTVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNS 330

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           CQ  QES KQ++++KLP+V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+  
Sbjct: 331 CQSYQESTKQLTMKKLPIVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-K 387

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDA 536
            SR      P D       NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA
Sbjct: 388 ESRMKEGQPPTDC----VPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDA 441

Query: 537 WITEVNENTVRAAQGYMMFYVQKML 561
            IT+     +  ++GY++FY ++ L
Sbjct: 442 IITKATIEDLLYSEGYLLFYHKQGL 466


>gi|332029700|gb|EGI69579.1| Ubiquitin carboxyl-terminal hydrolase 22 [Acromyrmex echinatior]
          Length = 501

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 192/546 (35%), Positives = 284/546 (52%), Gaps = 56/546 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A +R+  S +  C  C      RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHS-FFVTSTSTEARVRKAVSCL--CHTCKTYK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+    V  A
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDREL-LKVAKA 113

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
             + + +S             YR W P   E  L+ N+  P       N  +  GLRGL 
Sbjct: 114 QWSELAKSLSFGEF-------YRAWEPTQTEAELLRNH--PRRRRVVENSTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLGNTCF+N ++QAL HTP LR+YFL+DRH   +C   +   LCL C++  +F   + G+
Sbjct: 163 NLGNTCFVNCIVQALIHTPLLRDYFLADRH---HCPQPS---LCLVCEVSHLFQEFYSGN 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           + P +  K L+  W H  +LA YEQQDAHEFFI+ LD +H+  E      +   +   CI
Sbjct: 217 KAPLTLHKLLHLIWTHVRHLAGYEQQDAHEFFIATLDVLHKHCEATTILVKDNPHHCKCI 276

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
             ++F+G L+SDV+C AC   STT DP  D SLDL     +S                 G
Sbjct: 277 IDQIFTGCLQSDVVCQACNGVSTTIDPFWDISLDLTSAASTS-----------------G 319

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
            N+      ++L+ CL++FTR E LGS  K  C  C+  QES KQ+++++LP+V+ FH+K
Sbjct: 320 SNTPG--PPTSLLDCLEKFTRAEHLGSSAKIKCSNCETYQESTKQLTMKQLPIVAIFHLK 377

Query: 443 RFEHSSV--RKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPS 500
           RFEH  +  +   +K+  ++ FP  LDM P++S    R    N     +G   N  +   
Sbjct: 378 RFEHFIIQDKIFKKKISTFISFPEQLDMTPFMSH---RRNGNNNSAMLNGLSKNGEDMSF 434

Query: 501 SE--FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           S+  + LFAV+ H G L+ GHY  ++R   ++W+KC+D  IT      V  ++GY++FY 
Sbjct: 435 SDNRYSLFAVINHEGSLETGHYTAFIRQQRDQWFKCNDHLITRAKLKDVLTSEGYLLFYH 494

Query: 558 QKMLYY 563
           +++L Y
Sbjct: 495 KQILEY 500


>gi|311276366|ref|XP_003135158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Sus
           scrofa]
          Length = 710

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 197/556 (35%), Positives = 293/556 (52%), Gaps = 47/556 (8%)

Query: 17  QIFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCP 75
           Q  P  C H+  F  A+N  K  R I          G    R+  ++   C VC  +   
Sbjct: 188 QQGPTGCSHVESFKVAKNWQKNLRLIYQRFIW---SGTPETRKRKAKSCICHVC-STHMN 243

Query: 76  RLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF 135
           RL++C++C    C    H     IH  K +    H +AVDV    ++C  C+D VYD+D 
Sbjct: 244 RLHSCLSCVFFGCFTEKH-----IH--KHAETKQHNLAVDVYHGVIYCFICKDYVYDKDI 296

Query: 136 D-AAVVLAHTTSIIQSSKPENLRKRR----RIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
           +  A       S + +S   ++ +++     ++ +  + + +E+   +          S 
Sbjct: 297 EQIAKETKDKVSKLLTSTSSDVSQQQCMTSGVEEKQLTCESKEQEPKLVKPKKKRRKKSV 356

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACD 250
                 GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H            LCL C+
Sbjct: 357 ---YTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TSPSLCLVCE 409

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
           + ++F A++ G+R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H   ++D  
Sbjct: 410 MSSLFHAMYSGNRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSKEDSV 469

Query: 311 KPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
              +     C CI   +F+G L+SDV C  C   STT DPC D SLDL P   ++    +
Sbjct: 470 GQEASNPNCCNCIIDHIFTGGLQSDVTCQVCHTVSTTIDPCWDISLDL-PGSCATFSCQN 528

Query: 370 TKSNHSCNCEADGMNSSQN--CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            +        ADG  S      G  +L  CL  FTR E LGS  K  C  CQ  QES KQ
Sbjct: 529 PE-------RADGTVSRDERIPGNPSLTDCLQWFTRREHLGSSAKIKCSSCQSYQESTKQ 581

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           ++++KLP+V+CFHIKRFEH  V K  RK++ ++ FPL LDM P+LSS+   S+   R   
Sbjct: 582 LTMKKLPIVACFHIKRFEH--VGKQRRKINTFISFPLELDMTPFLSST-KESKMKER--- 635

Query: 488 FDGDESNTLNEP-SSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENT 545
               +  T   P  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT+     
Sbjct: 636 ----QPQTDYAPIENKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAVITKATIED 691

Query: 546 VRAAQGYMMFYVQKML 561
           +  ++GY++FY ++ L
Sbjct: 692 LLYSEGYLLFYHKQGL 707


>gi|354491289|ref|XP_003507788.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
           [Cricetulus griseus]
          Length = 709

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 189/548 (34%), Positives = 283/548 (51%), Gaps = 54/548 (9%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F  A+N  K  R I          G    R+  ++   C VC ++   RL+
Sbjct: 197 PTGCSHVESFKVAKNWRKNLRMIYQRF---IWSGTPETRKRKAKSCICQVC-NTHKNRLH 252

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
            C++C    C       H+ IHA        H +AVD+    ++C  C+D VYD+D +  
Sbjct: 253 LCLSCVYFGCFT---EKHIHIHAETKQ----HNLAVDLYHGVIYCFLCKDYVYDKDIEQI 305

Query: 139 V------VLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNG 192
                  +L    S       +        D +       + + +V         +    
Sbjct: 306 AKETKEKILGLLPSTAVDVSYQQCMTLEAEDNQSTCESKEQETTLVKPKKKRRKKTVY-- 363

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
               GLRGL NLGNTCFMN ++QAL   P L+++FLSD+H    C +     LCL C++ 
Sbjct: 364 -YTVGLRGLINLGNTCFMNCIVQALTRIPLLKDFFLSDKHK---C-TMTSPSLCLVCEMS 418

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           ++F A++ G++ P+ P K L+  W HA +LA Y QQDAHEF I++LD +H     D  + 
Sbjct: 419 SLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSRDDSIEQ 478

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
               N   CI  ++F+G L+SD+ C  C   STT DPC D SLDL P   +S + S T S
Sbjct: 479 EGNPNSCNCIIDQIFTGGLQSDLTCQVCHGVSTTIDPCWDISLDL-PGSYTSERASGTVS 537

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
                   DG  +    G  +L  CL  FTRPE LGS  K  C +CQ  QES KQ++++K
Sbjct: 538 R-------DGSKA----GGPSLTDCLQWFTRPEDLGSSAKIKCSRCQSYQESTKQLTMKK 586

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS---SILRSRFGNRFFPFD 489
           LP+V+CFH+KRFEH  + K  RK++ ++ FPL LDM P+L+S   SI++ +      P +
Sbjct: 587 LPIVACFHLKRFEH--LGKQRRKINTFISFPLELDMTPFLASTKESIMKGQPLADCVPSE 644

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRA 548
                      +++ LFAV+ H G L++GHY +++R   ++W+ CDDA +T+     +  
Sbjct: 645 -----------NKYSLFAVINHHGTLESGHYTSFVRQQKDQWFSCDDAIVTKATMEELLY 693

Query: 549 AQGYMMFY 556
           ++GY++FY
Sbjct: 694 SEGYLLFY 701


>gi|223005906|ref|NP_001138545.1| ubiquitin carboxyl-terminal hydrolase 27 [Homo sapiens]
 gi|229558013|sp|A6NNY8.3|UBP27_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
           Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
           carboxyl-terminal hydrolase 22-like; AltName:
           Full=Ubiquitin thioesterase 27; AltName:
           Full=Ubiquitin-specific-processing protease 27; AltName:
           Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
 gi|119610336|gb|EAW89930.1| hCG1640930 [Homo sapiens]
 gi|380785533|gb|AFE64642.1| ubiquitin carboxyl-terminal hydrolase 27 [Macaca mulatta]
 gi|410213554|gb|JAA03996.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
 gi|410299550|gb|JAA28375.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
          Length = 438

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 181/452 (40%), Positives = 256/452 (56%), Gaps = 34/452 (7%)

Query: 126 CRDQVYDRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMV 178
           C+D VYD+D +         ++ +Q+S    +  ++         +  W     E  L+ 
Sbjct: 2   CKDYVYDKDIEQIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLG 61

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
           +N       SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+
Sbjct: 62  HNPRRRRITSS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CE 114

Query: 239 SKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
             +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ L
Sbjct: 115 MPSP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAAL 173

Query: 299 DGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           D +H   + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL
Sbjct: 174 DVLHRHCKGDDVGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL 233

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
            P   +S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  
Sbjct: 234 -PGSCTSFWPMSPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGS 286

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           CQ  QES KQ+++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS  
Sbjct: 287 CQSYQESTKQLTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKE 344

Query: 478 RSRFGNRFFPFD-GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDD 535
               G    P + G+  N       ++ LFAVV H G L++GHY +++R   ++W+KCDD
Sbjct: 345 SRMNGQLQLPTNSGNNEN-------KYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDD 397

Query: 536 AWITEVNENTVRAAQGYMMFYVQKMLYYKASE 567
           A IT+ +   V  ++GY++FY +++L +++ +
Sbjct: 398 AVITKASIKDVLDSEGYLLFYHKQVLEHESEK 429


>gi|223005910|ref|NP_062334.2| ubiquitin carboxyl-terminal hydrolase 27 [Mus musculus]
 gi|226753949|sp|Q8CEG8.2|UBP27_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
           Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
           thioesterase 27; AltName:
           Full=Ubiquitin-specific-processing protease 27; AltName:
           Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
          Length = 438

 Score =  308 bits (788), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 182/445 (40%), Positives = 254/445 (57%), Gaps = 32/445 (7%)

Query: 126 CRDQVYDRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMV 178
           C+D VYD D +         ++ +Q+S    + +++         Y  W     E  L+ 
Sbjct: 2   CKDYVYDIDIEQIAKEEQGEALKLQASTSTEVSQQQCSVPGLGEKYPTWETTKPELELLG 61

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
           +N       SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+
Sbjct: 62  HNPRRRRIASS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CE 114

Query: 239 SKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
             +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ L
Sbjct: 115 MPSP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAAL 173

Query: 299 DGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           D +H   + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL
Sbjct: 174 DVLHRHCKGDDVGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL 233

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
            P   +S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  
Sbjct: 234 -PGSCTSFWPMSPGRESSLNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGS 286

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           CQ  QES KQ++++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS  
Sbjct: 287 CQSYQESTKQLTMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKE 344

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDA 536
               G    P     +N+ N   +++ LFAVV H G L++GHY +++R   ++W+KCDDA
Sbjct: 345 TRVNGQLQLP-----TNSANN-ENKYSLFAVVNHQGTLESGHYTSFIRHHRDQWFKCDDA 398

Query: 537 WITEVNENTVRAAQGYMMFYVQKML 561
            IT+ +   V  ++GY++FY +++L
Sbjct: 399 VITKASIKDVLDSEGYLLFYHKQVL 423


>gi|212275975|ref|NP_001131019.1| ubiquitin specific protease 51 [Mus musculus]
          Length = 661

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 189/551 (34%), Positives = 282/551 (51%), Gaps = 59/551 (10%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F  A+N  +  R I          G    R+  ++   C +C      RL+
Sbjct: 148 PTGCCHVESFKVAKNWQRNLRMIYQRFIW---SGTPETRKRKAKSCICQICSTHK-NRLH 203

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C       H+ IHA  T     H +AVD+    ++C  CRD VYD+D +  
Sbjct: 204 SCLSCVFFGCFT---DKHIHIHAETTQ----HNLAVDLCHGVIYCFMCRDYVYDKDIEKI 256

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR-- 196
                   +   S P      +++     + ++ E  L   +     S+        +  
Sbjct: 257 AKETKEKILGLLSSPTGDASYQQL----MASEVEENQLTCESKDQETSLVKPKKKRRKKT 312

Query: 197 -----GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
                G RGL NLGNTCFMN ++Q L H P L+ +FLS++H    C       LCL C++
Sbjct: 313 MYYTVGFRGLINLGNTCFMNCIVQVLTHIPLLKEFFLSNKHK---CM-MTSPSLCLVCEM 368

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
             +F A++ G++ P+ P K L+  W HA +LA Y QQDA EF I++LD +H     D   
Sbjct: 369 SLLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAQEFLIAILDVLHRHSRDD--G 426

Query: 312 PRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
              +GN +CC  I   +F+G L+SD+ C  C   STT DPC D SLDL         +SS
Sbjct: 427 IDQEGNSNCCNCIIDHIFTGSLQSDLTCQVCHGVSTTIDPCWDISLDLPGPYTPGRASSS 486

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
           T S        DG    Q   + +L  CL  FTRPE LGS  K  C QCQ  QES KQ++
Sbjct: 487 TSSR-------DG----QKPRVISLTDCLKWFTRPEDLGSSAKIKCSQCQSYQESTKQLT 535

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS---SILRSRFGNRFF 486
           ++KLP+V+CFH+KRFEH  + K  RK++ ++ FPL LDM P+L+S   SI++ +      
Sbjct: 536 MKKLPIVACFHLKRFEH--LGKQRRKINSFISFPLELDMTPFLASTKESIMKGQPLTECV 593

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENT 545
           P +           +++ LFAV+ H G L++GHY +++R   ++W+ CDDA +T+     
Sbjct: 594 PSE-----------NKYSLFAVINHHGTLESGHYTSFVRQEKDQWFSCDDAVVTKATMEE 642

Query: 546 VRAAQGYMMFY 556
           +  ++GY++FY
Sbjct: 643 LLNSEGYLLFY 653


>gi|351706550|gb|EHB09469.1| Ubiquitin carboxyl-terminal hydrolase 27 [Heterocephalus glaber]
          Length = 438

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 182/451 (40%), Positives = 256/451 (56%), Gaps = 32/451 (7%)

Query: 126 CRDQVYDRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMV 178
           C+D VYD+D +         ++ +Q+S    +  ++         Y  W     E  L+ 
Sbjct: 2   CKDYVYDKDIEQIAKEEQGQALKLQASTSAEVSHQQCSVPGLGEKYPTWETTKPELELLG 61

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
           +N+      SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+
Sbjct: 62  HNSRRRRIASS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CE 114

Query: 239 SKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
             +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ L
Sbjct: 115 MPSP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAAL 173

Query: 299 DGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           D +H   + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL
Sbjct: 174 DVLHRHCKGDDVGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL 233

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
            P   +S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  
Sbjct: 234 -PGSCTSFWPMSPGRETSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGS 286

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           CQ  QES KQ+++ KLP+V+CFH KRFEHS   K  RK+  Y+ FPL LDM P+++SS  
Sbjct: 287 CQSYQESTKQLTMNKLPVVACFHFKRFEHSV--KQRRKITTYISFPLELDMTPFMASSKE 344

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL-RLSNKWYKCDDA 536
               G    P     S+  NE  +++ LFAVV H G L++GHY +++    ++W+KCDDA
Sbjct: 345 SRMNGQLQLP----TSSGNNE--NKYSLFAVVNHQGTLESGHYTSFICHHKDQWFKCDDA 398

Query: 537 WITEVNENTVRAAQGYMMFYVQKMLYYKASE 567
            IT+ +   V  ++GY++FY +++L +++ +
Sbjct: 399 VITKASIKDVLDSEGYLLFYHKQVLEHESEK 429


>gi|297303872|ref|XP_002806289.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Macaca
           mulatta]
          Length = 487

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/374 (44%), Positives = 229/374 (61%), Gaps = 23/374 (6%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C++ ++F 
Sbjct: 125 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVCEMSSLFR 180

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
            ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D     +  
Sbjct: 181 ELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANN 240

Query: 317 NGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    S     S
Sbjct: 241 PNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPMSPGRESS 299

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
            N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+++ KLP+
Sbjct: 300 VNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPV 353

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD-GDESN 494
           V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G    P + G+  N
Sbjct: 354 VACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNEN 411

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYM 553
                  ++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY+
Sbjct: 412 -------KYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 464

Query: 554 MFYVQKMLYYKASE 567
           +FY +++L +++ +
Sbjct: 465 LFYHKQVLEHESEK 478


>gi|148699415|gb|EDL31362.1| mCG1344 [Mus musculus]
          Length = 629

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 189/551 (34%), Positives = 282/551 (51%), Gaps = 59/551 (10%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F  A+N  +  R I          G    R+  ++   C +C      RL+
Sbjct: 116 PTGCCHVESFKVAKNWQRNLRMIYQRFIW---SGTPETRKRKAKSCICQICSTHK-NRLH 171

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C       H+ IHA  T     H +AVD+    ++C  CRD VYD+D +  
Sbjct: 172 SCLSCVFFGCFT---DKHIHIHAETTQ----HNLAVDLCHGVIYCFMCRDYVYDKDIEKI 224

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR-- 196
                   +   S P      +++     + ++ E  L   +     S+        +  
Sbjct: 225 AKETKEKILGLLSSPTGDASYQQL----MASEVEENQLTCESKDQETSLVKPKKKRRKKT 280

Query: 197 -----GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
                G RGL NLGNTCFMN ++Q L H P L+ +FLS++H    C       LCL C++
Sbjct: 281 MYYTVGFRGLINLGNTCFMNCIVQVLTHIPLLKEFFLSNKHK---CM-MTSPSLCLVCEM 336

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
             +F A++ G++ P+ P K L+  W HA +LA Y QQDA EF I++LD +H     D   
Sbjct: 337 SLLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAQEFLIAILDVLHRHSRDD--G 394

Query: 312 PRSQGNGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
              +GN +CC  I   +F+G L+SD+ C  C   STT DPC D SLDL         +SS
Sbjct: 395 IDQEGNSNCCNCIIDHIFTGSLQSDLTCQVCHGVSTTIDPCWDISLDLPGPYTPGRASSS 454

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
           T S        DG    Q   + +L  CL  FTRPE LGS  K  C QCQ  QES KQ++
Sbjct: 455 TSSR-------DG----QKPRVISLTDCLKWFTRPEDLGSSAKIKCSQCQSYQESTKQLT 503

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS---SILRSRFGNRFF 486
           ++KLP+V+CFH+KRFEH  + K  RK++ ++ FPL LDM P+L+S   SI++ +      
Sbjct: 504 MKKLPIVACFHLKRFEH--LGKQRRKINSFISFPLELDMTPFLASTKESIMKGQPLTECV 561

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENT 545
           P +           +++ LFAV+ H G L++GHY +++R   ++W+ CDDA +T+     
Sbjct: 562 PSE-----------NKYSLFAVINHHGTLESGHYTSFVRQEKDQWFSCDDAVVTKATMEE 610

Query: 546 VRAAQGYMMFY 556
           +  ++GY++FY
Sbjct: 611 LLNSEGYLLFY 621


>gi|344249976|gb|EGW06080.1| Ubiquitin carboxyl-terminal hydrolase 27 [Cricetulus griseus]
          Length = 438

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 180/452 (39%), Positives = 256/452 (56%), Gaps = 34/452 (7%)

Query: 126 CRDQVYDRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMV 178
           C+D VYD+D +         ++ +Q+S    + +++         Y  W     E  L+ 
Sbjct: 2   CKDYVYDKDIEQIAKEEQGEALKLQASTSTEVSQQQCSVPGLGEKYLTWETTKPELELLG 61

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
           +N       SS       GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+
Sbjct: 62  HNPRRRRITSS----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CE 114

Query: 239 SKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
             +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ L
Sbjct: 115 MPSP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAAL 173

Query: 299 DGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           D +H   + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL
Sbjct: 174 DVLHRHCKGDDVGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL 233

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
            P   +S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  
Sbjct: 234 -PGSCTSFWPMSPGRESSMNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCSS 286

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           CQ  QES KQ++++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS  
Sbjct: 287 CQSYQESTKQLTMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKE 344

Query: 478 RSRFGNRFFPFD-GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDD 535
               G    P + G+  N       ++ LFA V H G L++GHY +++R   ++W+KCDD
Sbjct: 345 TRMNGQLQLPTNSGNNEN-------KYSLFAGVNHQGTLESGHYTSFIRHHRDQWFKCDD 397

Query: 536 AWITEVNENTVRAAQGYMMFYVQKMLYYKASE 567
           A I + +   V  ++GY++FY +++L +++ +
Sbjct: 398 AVIIKASIKDVLNSEGYLLFYHKQVLEHESEK 429


>gi|444521987|gb|ELV13253.1| Ubiquitin carboxyl-terminal hydrolase 27 [Tupaia chinensis]
          Length = 437

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 180/452 (39%), Positives = 257/452 (56%), Gaps = 35/452 (7%)

Query: 126 CRDQVYDRDFDAAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMV 178
           C+D VYD+D +         ++ +Q+S    +  ++         Y  W     E  L+ 
Sbjct: 2   CKDYVYDKDIEQIAKEEQGEALKLQASTSTEVSHQQCSGPGLGEKYPTWETTKPELELL- 60

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
               P     +S+  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH+   C+
Sbjct: 61  --GHPRRRRIASSFTI--GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHS---CE 113

Query: 239 SKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
             +   LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ L
Sbjct: 114 MPSP-ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAAL 172

Query: 299 DGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           D +H   + D     +     C CI  ++F+G L +DV C AC   STT DPC D SLDL
Sbjct: 173 DVLHRHCKGDDVGKAANNPNHCNCIIDQIFTGGLHTDVTCQACHGVSTTIDPCWDISLDL 232

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
            P   +S    S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  
Sbjct: 233 -PGSCTSFWPMSPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGS 285

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           CQ  QES KQ+++ KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS  
Sbjct: 286 CQSYQESTKQLTMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKE 343

Query: 478 RSRFGNRFFPF-DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDD 535
               G    P   G++ N       ++ LFAVV H G L++GHY +++R   ++W+KCDD
Sbjct: 344 SRMNGQLQLPTSSGNDEN-------KYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDD 396

Query: 536 AWITEVNENTVRAAQGYMMFYVQKMLYYKASE 567
           A IT+ +   V  ++GY++FY +++L +++ +
Sbjct: 397 AVITKASIKDVLDSEGYLLFYHKQVLEHESEK 428


>gi|281203449|gb|EFA77649.1| hypothetical protein PPL_12256 [Polysphondylium pallidum PN500]
          Length = 605

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 183/532 (34%), Positives = 275/532 (51%), Gaps = 87/532 (16%)

Query: 63  VPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELF 122
           +P C  CG  +  R++ C+ C    C    H      H  K  +  +H +A+D    +++
Sbjct: 83  LPSCRECGSFN-GRIHCCLQCVYAGCW--KHQ-----HIIKHFNEANHCLAIDSSLYQIY 134

Query: 123 CCACRDQVYDRDFDA---AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVN 179
           C  C D +YD  +     +++ + T +I + + P N R +    Y  W P          
Sbjct: 135 CHHCSDYIYDDQYTEILDSLIQSQTITIQELANPINNRAK----YHSWKP-------TPE 183

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
           + + I + S+ N     GLRGLNNLGNTCFMN +LQ+  H P LRNYFLSD H+   C+ 
Sbjct: 184 DTAIIQNNSNINNSTMLGLRGLNNLGNTCFMNVILQSFIHNPILRNYFLSDMHSNSKCEK 243

Query: 240 KNGVRL----------------------------------------------------CL 247
           +    +                                                    CL
Sbjct: 244 RREKEMNRSSGGNSSNDNSSDSESSSSVSTPTSTNGSGNGNCSNSGSSSSNNGNGSTICL 303

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
            C++D +F+ +F G + PY+P  FLYS W +++ LASYEQQDAHEF IS L+GIH     
Sbjct: 304 GCEMDILFTQVFTGLKNPYTPHHFLYSCWNYSNYLASYEQQDAHEFLISSLNGIH----- 358

Query: 308 DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
            QH   + G    CI H  F G+LRS+V C  C FTS+T DP  D SLD+  +       
Sbjct: 359 -QHIGGTHGKDCNCIVHCTFGGLLRSEVKCTTCQFTSSTTDPFTDISLDIPKSSHHHGSH 417

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            +   +       +  N++ +   ++L  CL+RFT+PE+L  D+K+FC+QC  +QES KQ
Sbjct: 418 HNEHDS-----NNNNNNNNSSNNHNSLEACLERFTQPEKL--DEKYFCRQCNSKQESTKQ 470

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           ++   LP+V CFH+KRFE S   + + K+D +++FP  +DM+PY SS+  ++   N    
Sbjct: 471 LTFNTLPVVICFHLKRFEQSKTHRRTHKIDTFIEFPPVIDMSPYTSSTHKKNENQNNNQN 530

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWIT 539
            +  +S   N+ S  +ELFAVV HTGK+D GHY  +++ +++W+KCDD+ IT
Sbjct: 531 EENQDSKLPNDESFIYELFAVVNHTGKMDGGHYTCFVKHNDRWFKCDDSMIT 582


>gi|194751819|ref|XP_001958221.1| GF10813 [Drosophila ananassae]
 gi|190625503|gb|EDV41027.1| GF10813 [Drosophila ananassae]
          Length = 668

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 192/539 (35%), Positives = 281/539 (52%), Gaps = 100/539 (18%)

Query: 54  AAIRRDSSEVP----RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS 109
           A + RD+ E       C  CG S   +LYAC+ C    C     +SH+         A  
Sbjct: 202 ACVNRDAREKKAIHCNCFECG-SYGIQLYACLHCIYFGCRGAHITSHL--------RAKK 252

Query: 110 HEIAVDVDRAELFCCACRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           H +A+++    L+C ACRD +YD R  + A++         + K E    ++ + ++PW 
Sbjct: 253 HNVALELSHGTLYCYACRDFIYDARSREYALI---------NRKLEAKDLQKSLGWQPWI 303

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  +E +L++ NA     +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+
Sbjct: 304 PTAKETNLLLANARR--RLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 359

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH+   C SK+  + CL C++  +F   + G R P S  + L+  W HA +LA YEQQ
Sbjct: 360 SDRHD---CGSKSSHK-CLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQ 415

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGN-------------------GDC-CIAHRVFS 328
           DAHEFFI+ LD +H    K + +  ++ N                   G C CI  ++F+
Sbjct: 416 DAHEFFIATLDVLHRHCVKAKAEHENKSNSSSSGSGTNSSSSSSSHCYGQCNCIIDQIFT 475

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G+L+SDV+C AC   STTFDP  D SLDL                           ++ +
Sbjct: 476 GMLQSDVVCQACNGVSTTFDPFWDISLDLG-------------------------ETTTH 510

Query: 389 CGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
            G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEH
Sbjct: 511 GGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEH 570

Query: 447 SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           S++  + RK+  ++QFP+  DM P++S    ++ +G+                   F L+
Sbjct: 571 SAL--IDRKISSFIQFPVEFDMTPFMSEK--KNAYGD-----------------FRFSLY 609

Query: 507 AVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           AVV H G +D GHY  Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 610 AVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 668


>gi|225709338|gb|ACO10515.1| Ubiquitin carboxyl-terminal hydrolase 22 [Caligus rogercresseyi]
          Length = 484

 Score =  305 bits (780), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 198/545 (36%), Positives = 283/545 (51%), Gaps = 68/545 (12%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H A++    GT  +R +   L+   P G  A R   S+   C  C  S  P+L AC+ 
Sbjct: 3   CTHFAEYKNTYGTGSYRVVH--LYFVSPTGPEA-REWKSKSCLCHGC-QSHGPQLRACLH 58

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C       H   HA K S    H  +V++    +FC  C D +YD D +    + 
Sbjct: 59  CIHFGC-----PEHYGAHAKKLS----HNFSVELQYGNVFCFHCGDYIYDYDIEMISQIC 109

Query: 143 HTTSI--IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
            T S   I    P          +  WSP   + S +  N         S      GLRG
Sbjct: 110 WTKSYHAIGLGTP----------FFSWSPSQEDISTLQKNKKRKGFGHQST----IGLRG 155

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLGNTCFM+ ++Q+L HTP LR+YFLSDRH R   Q KN    C+ C++  +F   + 
Sbjct: 156 LINLGNTCFMSCIIQSLIHTPLLRDYFLSDRH-RCMFQGKND---CMVCEVSRLFQEFYS 211

Query: 261 GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK-VEKDQHKPRSQGNGD 319
           G ++P  P   L+  W HA +LA YEQQDAHEFFI+ LD +H   + K    P    N D
Sbjct: 212 GSKVPLVPHVLLHMTWTHAHHLAGYEQQDAHEFFIATLDLLHRHLIHKTTVNP---ANCD 268

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
           C I   +F+G L+SDV+C  C   STT DP  D SLDL     SS  +SS+ S+ +    
Sbjct: 269 C-IVDTIFTGKLQSDVVCQNCKGVSTTIDPFWDISLDLPAATPSSSNSSSSSSSSN---- 323

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      + +L  CL+RFT+PE LGS  K  C  CQ  QES KQ++++KLP+V+ F
Sbjct: 324 ----------HVISLHNCLERFTKPEHLGSSAKIKCSNCQTYQESTKQLTMKKLPIVASF 373

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           H+KRFEHSS  +  +K+   + FP  LDM+P++S                 + ++ +N  
Sbjct: 374 HLKRFEHSS--RFHKKISTRIAFPEILDMSPFVSH-------------IRNNSASPVNSG 418

Query: 500 SSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           S  + LFAV+ HTG ++AGHY +++R   ++WY+C+D  I   + + V  ++GY++FY +
Sbjct: 419 SYTYTLFAVINHTGNIEAGHYTSFVRQHRDRWYRCNDHQIVPADLSDVLGSEGYLLFYHK 478

Query: 559 KMLYY 563
           ++L Y
Sbjct: 479 QILEY 483


>gi|157136783|ref|XP_001656905.1| hypothetical protein AaeL_AAEL003517 [Aedes aegypti]
 gi|108880934|gb|EAT45159.1| AAEL003517-PA, partial [Aedes aegypti]
          Length = 533

 Score =  304 bits (779), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 197/575 (34%), Positives = 282/575 (49%), Gaps = 85/575 (14%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H A F    G + F  +    +      + A RR +     C  CG S  P+LY+C+ 
Sbjct: 11  CAHFAAFVKEYGLESFSVVH--AYFSACINKEARRRKALSC-LCYKCGGSG-PQLYSCLH 66

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C      +H+  H  +T     H I +++    ++C  C+D  YD +  A     
Sbjct: 67  CIYFGCK----GAHINDHCKQTK----HYIVLELCYGMIYCYQCKDFTYDSECQAIA--- 115

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
               I + +K  N    + + +RPWSP   E  L++ N       + ++     GLRGL 
Sbjct: 116 -EKHIRKEAKSLN----KSLSWRPWSPSKLEIDLLLKNPKRRHVTAFTS----IGLRGLL 166

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG+TCFMN ++QAL HTP LR+YFLS+RH    C +K   + CL C++  +F   + G 
Sbjct: 167 NLGSTCFMNCIVQALIHTPLLRDYFLSERHE---CTTKTAAK-CLVCEVSRLFQEFYSGA 222

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD--- 319
           R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H     D+ K +     D   
Sbjct: 223 RGPLSLHRLLHLIWNHARHLAGYEQQDAHEFFIATLDVLHRHSSADKSKQQQFQQPDNPT 282

Query: 320 -C-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            C CI  ++F+G L+SDV+C AC   STT DP  D SLDL                    
Sbjct: 283 HCNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDL-------------------- 322

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
              +  N        +L+ CL+RFTR E LGS  K  C  C+  QES KQ+S+R LP+V+
Sbjct: 323 --GEAQNQGYGGPPKSLIDCLERFTRAEHLGSSAKIKCSSCKSYQESTKQLSMRTLPIVA 380

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG------- 490
            FH+KRFEHSS+  + +K+  ++ FP  LDM P++S      +                 
Sbjct: 381 SFHLKRFEHSSL--IDKKISTFISFPSELDMTPFMSKKKSEQQSPGTSSGSASSSKSKSS 438

Query: 491 ------------------DESNTLNEPSSEFE--LFAVVTHTGKLDAGHYVTYLR-LSNK 529
                             D+ N  +  +S+F   L+AV+ H G LDAGHY  Y+R   + 
Sbjct: 439 DRKHAAGSSGTSGTGGSEDDHNRSHHDTSDFRYSLYAVINHVGTLDAGHYTAYVRHQKDI 498

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           W KCDD  IT      V  ++GY++FY +K+L Y+
Sbjct: 499 WVKCDDHIITTATLKQVLDSEGYLLFYHKKILEYE 533


>gi|443715045|gb|ELU07196.1| hypothetical protein CAPTEDRAFT_18184 [Capitella teleta]
          Length = 533

 Score =  304 bits (779), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 196/565 (34%), Positives = 292/565 (51%), Gaps = 60/565 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL+ F    G +PFR I    +      R + +R +  + +C  C   S PRL++C+ 
Sbjct: 6   CDHLSAFKEEKGIEPFRIIFS--YFISCCSRESRKRKALAL-QCHTCRQMS-PRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    H     IH    S   +HE+++D+    + C  C D VYDR+ +      
Sbjct: 62  CVFFGCFGAKH-----IHQHAKSK--NHELSMDLTYGAILCRVCSDYVYDREIEELFRTQ 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
              S +               + PW P   E  L+  N          +G+   GLRGL 
Sbjct: 115 QRKSALLLGMLN--------PFSPWEPSEMEVELLHQNPK----RRKIDGNSTIGLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLGNTCFMN ++QAL HTP LR+YFLSD+H    CQ     + CL C++  +F   + G 
Sbjct: 163 NLGNTCFMNCIVQALTHTPLLRDYFLSDQHK---CQMTQESQQCLVCEMSRLFQEFYSGV 219

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD--C 320
           R P++P + L+  W HA +LA YEQQDAHEF I+ LD IH+  +  ++K  + GN    C
Sbjct: 220 RTPHTPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVIHQHCKASRNKEDADGNTAQVC 279

Query: 321 -CIAHRVFSGILRSDVMCMACGFTST---TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
            CI  R+F+G L+SDV C  C    T      P +     + P   +  KT+    + S 
Sbjct: 280 DCIIDRIFTGGLQSDVTCQECNILYTFRLEMSPRLSTPSGISPWISAPRKTTLHLVSWSD 339

Query: 377 NCEADG---MNSSQNCGI------STLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            C  D    +++  + G+      ++L  CL RFTRPE LGS  K  C +C   QES KQ
Sbjct: 340 PCATDSHTLISAVFSNGLDRFEEATSLTYCLRRFTRPEHLGSTAKIKCSKCHNYQESTKQ 399

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           ++++KLPLV+CFH+KRFEHS+     +K+  Y+ FP  LDM P++S+    SR  N    
Sbjct: 400 LTMKKLPLVACFHLKRFEHST--GYHKKISTYVSFPEELDMTPFMSA----SRDNN---- 449

Query: 488 FDGDESNTLNEPSS------EFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITE 540
            +G     + E +S      ++ L+AVV H G  D GHY  ++R   + W++C+D  IT+
Sbjct: 450 -NGYSHQVIQEAASGLTSENKYSLYAVVNHRGTADTGHYTCFIRQHKSHWFRCEDHLITK 508

Query: 541 VN-ENTVRAAQGYMMFYVQKMLYYK 564
            + +  V  ++GY++FY +++L Y+
Sbjct: 509 ASLDYEVLKSEGYLLFYHKQILDYE 533


>gi|195379222|ref|XP_002048379.1| GJ11383 [Drosophila virilis]
 gi|194155537|gb|EDW70721.1| GJ11383 [Drosophila virilis]
          Length = 704

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 191/525 (36%), Positives = 269/525 (51%), Gaps = 98/525 (18%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C  CG S   +LYAC+ C    C           H T    A  H IA+++    L+C A
Sbjct: 252 CFECG-SYGIQLYACLHCIYFGCR--------GAHITSHLRAKKHNIALELSHGTLYCYA 302

Query: 126 CRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
           CRD +YD R  + A++         + K E    ++ + ++PW P  +E +L++ NA   
Sbjct: 303 CRDFIYDARSREYALI---------NRKLEAKDLQKSLGWQPWIPTPKETNLLLANAR-- 351

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
             +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+SDRH+   C SK    
Sbjct: 352 RRLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD---CGSK-ATH 405

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
            CL C++  +F   + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H  
Sbjct: 406 KCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRH 465

Query: 305 VEKDQHKPRSQGN---------------------GDC-CIAHRVFSGILRSDVMCMACGF 342
             K + +  S+ N                     G C CI  ++F+G+L+SDV+C AC  
Sbjct: 466 CVKAKSEHESKSNSSSASGGNSSSGGNATATHCYGQCNCIIDQIFTGMLQSDVVCQACNG 525

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS--TLMGCLDR 400
            STTFDP  D SLDL                           ++ + G++  TL+ CL+R
Sbjct: 526 VSTTFDPFWDISLDLG-------------------------ETTTHGGVTPKTLIDCLER 560

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
           +TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEHS++  + RK+  ++
Sbjct: 561 YTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFI 618

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHY 520
           QFP+  DM P++S         N +  F              F L+AVV H G +D GHY
Sbjct: 619 QFPVEFDMTPFMSEK------NNAYGDF-------------RFSLYAVVNHVGTIDTGHY 659

Query: 521 VTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
             Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 660 TAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 704


>gi|409077619|gb|EKM77984.1| hypothetical protein AGABI1DRAFT_114838 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 597

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 188/525 (35%), Positives = 274/525 (52%), Gaps = 53/525 (10%)

Query: 53  RAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHS-SHVAIHATKTSSACSHE 111
           R + +R     P C VC + +  R +AC+ C+   C    H  +H+  H        SH 
Sbjct: 47  RTSTKRRKIAAPTCDVC-NLTLSRPFACLECSFTGCWTDRHILNHLESH--------SHG 97

Query: 112 IAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDL 171
             +DV    LFC  C D VYD  FD   +L    +  + +K + + +  R  + PW P+ 
Sbjct: 98  FCLDVTSGCLFCRECNDFVYDGIFDEIYLLCVLRAEEKGTKFQ-VSQMLRESFAPWMPNG 156

Query: 172 RERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSD 230
            + + +  NA            LP +G RGL NLG TCFMN VLQ+L H P +RNYFLSD
Sbjct: 157 SDTTALTGNAV-----------LPCQGRRGLLNLGQTCFMNVVLQSLVHNPLVRNYFLSD 205

Query: 231 RHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDA 290
           +HNR  C++      C  C++D +F  ++  D +PY P  FL + W+ ++ L+ + QQDA
Sbjct: 206 KHNRGQCKTDT----CTCCEMDKLFEEMYAEDAIPYGPVDFLATTWKASTELSGHAQQDA 261

Query: 291 HEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDP 349
           HEFFIS L+ IH          R   N  C CI H  FSG L+SDV C  C   ++T DP
Sbjct: 262 HEFFISALNQIHST-------SRGSTNVSCNCIVHSTFSGQLQSDVKCERCATITSTVDP 314

Query: 350 CVDFSLDLEPN-QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
            +D SL++  +  G      +T S        +     +N    TL  CL RFT PE+LG
Sbjct: 315 LMDVSLEINKSCGGGRSGNQATTSKTGGGIGGNEGVGLEN----TLTACLRRFTLPEKLG 370

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH-SSVRKMSRKVDRYLQFPLSLD 467
             +++ C +C    ++ K++SIRKLP V  F +KRFEH +S R  +RK+D  ++FP +L+
Sbjct: 371 M-KEYSCGKCGKSHDASKRLSIRKLPPVLAFQLKRFEHKTSDRSSARKIDTPIKFPATLN 429

Query: 468 MAPYLSSSILRSRFGNRFFPFD--------GDESNTLNEPSSEFELFAVVTHTGKLDAGH 519
           MAPY +S +      N   P +        G  S    +   E+ELFAV+ H G++D GH
Sbjct: 430 MAPYTTSVMKEIEKEN---PINSQKMEGSYGSLSRNGLDVLYEYELFAVINHEGQIDNGH 486

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           Y  Y R  ++W+K DD  +T  + +    +  YM+FYV++ L YK
Sbjct: 487 YTNYARFKDEWFKFDDDKVTHSSLSACLQSSAYMLFYVKRHLDYK 531


>gi|195128351|ref|XP_002008627.1| GI11709 [Drosophila mojavensis]
 gi|193920236|gb|EDW19103.1| GI11709 [Drosophila mojavensis]
          Length = 710

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 194/541 (35%), Positives = 274/541 (50%), Gaps = 103/541 (19%)

Query: 54  AAIRRDSSEVP----RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS 109
           A + +D+ E       C  CG S   +LYAC+ C    C     +SH+         A  
Sbjct: 243 ACVNKDAREKKAIHCNCFECG-SYGIQLYACLHCIYFGCRGAHITSHL--------RAKK 293

Query: 110 HEIAVDVDRAELFCCACRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           H IA+++    L+C ACRD +YD R  + A++         + K E    ++ + + PW 
Sbjct: 294 HNIALELSHGTLYCYACRDFIYDARSREYAII---------NRKLEAKDLQKSLGWIPWI 344

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  +E +L++ NA     +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+
Sbjct: 345 PTPKETNLLLANAR--RRLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 400

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH+      K     CL C++  +F   + G R P S  + L+  W HA +LA YEQQ
Sbjct: 401 SDRHDCGKSSHK-----CLVCEVSRLFQEFYSGSRTPLSLHRLLHLIWNHAKHLAGYEQQ 455

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGN---------------------GDC-CIAHRV 326
           DAHEFFI+ LD +H    K + +  S+ N                     G C CI  ++
Sbjct: 456 DAHEFFIATLDVLHRHCVKAKSEHESKSNSSSATGGNSSSSANATATHSYGQCNCIIDQI 515

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSS 386
           F+G+L+SDV+C AC   STTFDP  D SLDL                        G  +S
Sbjct: 516 FTGMLQSDVVCQACKGVSTTFDPFWDISLDL------------------------GETTS 551

Query: 387 QNCGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRF 444
              G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRF
Sbjct: 552 HG-GVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRF 610

Query: 445 EHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFE 504
           EHS++  + RK+  ++QFP+  DM P++S         N +  F              F 
Sbjct: 611 EHSAL--IDRKISSFIQFPVEFDMTPFMSEK------NNAYGDF-------------RFS 649

Query: 505 LFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYY 563
           L+AVV H G +D GHY  Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y
Sbjct: 650 LYAVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 709

Query: 564 K 564
           +
Sbjct: 710 E 710


>gi|426198961|gb|EKV48886.1| hypothetical protein AGABI2DRAFT_191063 [Agaricus bisporus var.
           bisporus H97]
          Length = 597

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 190/525 (36%), Positives = 274/525 (52%), Gaps = 53/525 (10%)

Query: 53  RAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHS-SHVAIHATKTSSACSHE 111
           R + +R     P C VC + +  R +AC+ C+   C    H  +H+  H        SH 
Sbjct: 47  RTSTKRRKIAAPTCDVC-NLTLSRPFACLECSFTGCWTDRHILNHLESH--------SHG 97

Query: 112 IAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDL 171
             +DV    LFC  C D VYD  FD   +L    +  + +K + + +  R  + PW P  
Sbjct: 98  FCLDVTSGCLFCRECNDFVYDGMFDEIYLLCVLRAEEKGTKFQ-VSQMLRESFAPWMP-- 154

Query: 172 RERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSD 230
                   N S   ++S  N  LP +G RGL NLG TCFMN VLQ+L H P +RNYFLSD
Sbjct: 155 --------NGSDTTALSG-NAVLPCQGRRGLLNLGQTCFMNVVLQSLVHNPLVRNYFLSD 205

Query: 231 RHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDA 290
           +HNR  C+    +  C  C++D +F  ++  D +PY P  FL + W+ ++ L+ + QQDA
Sbjct: 206 KHNRGQCK----IDTCTCCEMDKLFEEMYAEDAIPYGPVDFLATTWKASTELSGHAQQDA 261

Query: 291 HEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDP 349
           HEFFIS L+ IH          R   N  C CI H  FSG L+SDV C  C   ++T DP
Sbjct: 262 HEFFISALNQIHST-------SRGSTNVSCNCIVHSTFSGQLQSDVKCERCATVTSTVDP 314

Query: 350 CVDFSLDLEPN-QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
            +D SL++  +  G      +T S        +     +N    TL  CL RFT PE+LG
Sbjct: 315 LMDVSLEINKSCGGGRSGNQATTSKTGGGIGGNEGVGLEN----TLTACLRRFTLPEKLG 370

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH-SSVRKMSRKVDRYLQFPLSLD 467
             +++ C +C    ++ K++SIRKLP V  F +KRFEH +S R  +RK+D  ++FP +L+
Sbjct: 371 M-KEYSCGKCGKSHDASKRLSIRKLPPVLAFQLKRFEHKTSDRSSARKIDTPIKFPATLN 429

Query: 468 MAPYLSSSILRSRFGNRFFPFD--------GDESNTLNEPSSEFELFAVVTHTGKLDAGH 519
           MAPY +S +      N   P +        G  S    +   E+ELFAV+ H G++D GH
Sbjct: 430 MAPYTTSVMKEIEKEN---PINSQKMEGSYGSLSRNGLDVLYEYELFAVINHEGQIDNGH 486

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           Y  Y R  ++W+K DD  +T  + +    +  YM+FYV++ L YK
Sbjct: 487 YTNYARFKDEWFKFDDDKVTHSSLSACLQSSAYMLFYVKRHLDYK 531


>gi|444525392|gb|ELV13999.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Tupaia
           chinensis]
          Length = 479

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 198/549 (36%), Positives = 276/549 (50%), Gaps = 84/549 (15%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C HL+ F   N  +  RAI  C      G   A +R    +P  G  G    P    
Sbjct: 11  PPGCSHLSSFKVDNWKQNLRAIYQCFVWS--GTAEARKRKVRPLP--GAAGWRGHP---- 62

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
                                      A   E AVD+    ++C  C+D +YDRD +   
Sbjct: 63  ---------------------------APRREGAVDLMYGGIYCFLCQDYIYDRDME--- 92

Query: 140 VLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                  +I   +     K + +   +  W P  RE  L+ +N  P     +SN  +  G
Sbjct: 93  -------LIAKEEQRRAWKVQGVGEKFSTWEPTKRELELLKHN--PKRRKITSNCTI--G 141

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F  
Sbjct: 142 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLFQ- 196

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
                       + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++   
Sbjct: 197 ------------ELLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP 244

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S        
Sbjct: 245 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVV 304

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
           N E      S   G +TL  CL RFTRPE LGS  K  C      QES KQ++++KLP+V
Sbjct: 305 NGE------SHVAGTTTLTDCLRRFTRPEHLGSSAKIKCSGWASYQESTKQLTMKKLPIV 358

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
           +CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D   S+  
Sbjct: 359 ACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNSD-- 414

Query: 497 NEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMF 555
               +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++F
Sbjct: 415 ----NKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLF 470

Query: 556 YVQKMLYYK 564
           Y ++ L Y+
Sbjct: 471 YHKQFLEYE 479


>gi|241238064|ref|XP_002401245.1| ubiquitin-specific protease, putative [Ixodes scapularis]
 gi|215496141|gb|EEC05782.1| ubiquitin-specific protease, putative [Ixodes scapularis]
          Length = 587

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 196/553 (35%), Positives = 275/553 (49%), Gaps = 106/553 (19%)

Query: 23  CPHLADFHARNGTKPFRAIQD----CLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           CPHL       GT+ +R I      C+           R   +++ +C  C  +  PRL+
Sbjct: 6   CPHLTSLKDAKGTQAYRLIHSYFVCCV-------SKDARTKKAQLCKCHAC-HARGPRLH 57

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           AC+ C    C+    + H+  HA        H +AVD+    ++C  C D VYDR+ +A 
Sbjct: 58  ACLQCVYFGCYS---NRHIHEHARTNQ----HVLAVDISYGVVYCFTCADYVYDRELEAM 110

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGL 198
                             RK RR          R   L+                   GL
Sbjct: 111 A-----------------RKHRR----------RCARLL-------------------GL 124

Query: 199 RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAI 258
           RGL NLGNTCFMN ++QAL HTP LR+YFL+DRH    CQ ++   +CL C++  +F   
Sbjct: 125 RGLMNLGNTCFMNCIVQALTHTPLLRDYFLADRH---VCQFQDDPAMCLVCEMSRLFQEF 181

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
           +CG   P+ P + L+  W HA +LA YEQQDAHEFFI+ LD +H   +       +  + 
Sbjct: 182 YCGKSTPHIPYRLLHLVWTHARHLAGYEQQDAHEFFIATLDVLHRHCKGTNGISSTNPHH 241

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
             CI  ++F+G L+SDV+C +C   STT DP  D SLDL P            S+H    
Sbjct: 242 CNCIIDQIFTGGLQSDVVCQSCKGVSTTIDPFWDISLDLGP------------SSHL--- 286

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                    + G  T    L  FTRPE LGS  K  C QCQ  QES KQ++++KLP+V  
Sbjct: 287 ----QQLMPHPGWQT----LHLFTRPEHLGSSAKIRCGQCQSYQESTKQLTMKKLPVVCS 338

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
           FH+KRFEHS  R   +K+   + FP  LDM+P++SSS        R             E
Sbjct: 339 FHLKRFEHS--RSFHKKISSLISFPQYLDMSPFMSSS-------PRAPEAVAQAPEGAQE 389

Query: 499 PS-----SEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGY 552
           PS     +++ LFAVV H+G ++ GHY  Y+R   ++W+KCDD  IT  +   V  ++GY
Sbjct: 390 PSRPCHDNKYCLFAVVNHSGTIETGHYTAYIRQHRDRWFKCDDHLITRASLQDVLDSEGY 449

Query: 553 MMFYVQKMLYYKA 565
           ++FY +++L Y+A
Sbjct: 450 LLFYHKQILEYEA 462


>gi|5823525|gb|AAD53181.1|AF179590_1 ubiquitin-specific protease nonstop [Drosophila melanogaster]
          Length = 735

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 198/581 (34%), Positives = 292/581 (50%), Gaps = 107/581 (18%)

Query: 12  DKTNGQIFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVP----RCG 67
           D ++  +    C H   +   +    FR I            A + RD+ E       C 
Sbjct: 234 DDSSAVMSETGCRHYQSYVKEHSYDTFRVIDAYF-------AACVNRDARERKAIHCNCF 286

Query: 68  VCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACR 127
            CG S   +LYAC+ C    C     +SH+         +  H +A+++    L+C ACR
Sbjct: 287 ECG-SYGIQLYACLHCIYFGCRGAHITSHL--------RSKKHNVALELSHGTLYCYACR 337

Query: 128 DQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDS 186
           D +YD R  + A++         + K E    ++ I + PW P  +E +L++ NA     
Sbjct: 338 DFIYDARSREYALI---------NRKLEAKDLQKSIGWVPWVPTTKETNLLLANARR--R 386

Query: 187 MSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC 246
           +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+SDRH+   C SK+  + C
Sbjct: 387 LVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD---CGSKSSHK-C 440

Query: 247 LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV- 305
           L C++  +F   + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H    
Sbjct: 441 LVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCV 500

Query: 306 -EKDQHKPRSQGN-----------------GDC-CIAHRVFSGILRSDVMCMACGFTSTT 346
             K +H+ +S  +                 G C CI  ++F+G+L+SDV+C AC   STT
Sbjct: 501 KAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTT 560

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS--TLMGCLDRFTRP 404
           +DP  D SLDL                           ++ + G++  TL+ CL+R+TR 
Sbjct: 561 YDPFWDISLDLG-------------------------ETTTHGGVTPKTLIDCLERYTRA 595

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEHS++  + RK+  ++QFP+
Sbjct: 596 EHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFIQFPV 653

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL 524
             DM P++S    ++ +G+                   F L+AVV H G +D GHY  Y+
Sbjct: 654 EFDMTPFMSEK--KNAYGD-----------------FRFSLYAVVNHVGTIDTGHYTAYV 694

Query: 525 R-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 695 RHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 735


>gi|195494556|ref|XP_002094888.1| GE22066 [Drosophila yakuba]
 gi|194180989|gb|EDW94600.1| GE22066 [Drosophila yakuba]
          Length = 679

 Score =  301 bits (771), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 193/539 (35%), Positives = 278/539 (51%), Gaps = 100/539 (18%)

Query: 54  AAIRRDSSEVP----RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS 109
           A + RD+ E       C  CG S   +LYAC+ C    C     +SH+         +  
Sbjct: 213 ACVNRDARERKAIHCNCFECG-SYGIQLYACLHCIYFGCRGAHITSHL--------RSKK 263

Query: 110 HEIAVDVDRAELFCCACRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           H +A+++    L+C ACRD +YD R  + A++         + K E    ++ I + PW 
Sbjct: 264 HNVALELSHGTLYCYACRDFIYDARSREYALI---------NRKLEAKDLQKSIGWVPWV 314

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  +E +L++ NA     +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+
Sbjct: 315 PTAKETNLLLANARR--RLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 370

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH+   C SK+  + CL C++  +F   + G R P S  + L+  W HA +LA YEQQ
Sbjct: 371 SDRHD---CGSKSSPK-CLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQ 426

Query: 289 DAHEFFISMLDGIHE-----KVEKDQHKPRSQGN--------------GDC-CIAHRVFS 328
           DAHEFFI+ LD +H      K E D     S                 G C CI  ++F+
Sbjct: 427 DAHEFFIATLDVLHRHCVKAKAEHDSKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFT 486

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G+L+SDV+C AC   STT+DP  D SLDL                           ++ +
Sbjct: 487 GMLQSDVVCQACNGVSTTYDPFWDISLDLG-------------------------ETTTH 521

Query: 389 CGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
            G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEH
Sbjct: 522 GGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEH 581

Query: 447 SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           S++  + RK+  ++QFP+  DM P++S    ++ +G+                   F L+
Sbjct: 582 SAL--IDRKISSFIQFPVEFDMTPFMSEK--KNAYGD-----------------FRFSLY 620

Query: 507 AVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           AVV H G +D GHY  Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 621 AVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 679


>gi|157818203|ref|NP_001101722.1| ubiquitin carboxyl-terminal hydrolase 51 [Rattus norvegicus]
 gi|149031357|gb|EDL86355.1| rCG38961 [Rattus norvegicus]
          Length = 696

 Score =  301 bits (771), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 188/559 (33%), Positives = 280/559 (50%), Gaps = 80/559 (14%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F  A+N  +  R I          G    R+  ++   C VC      RL+
Sbjct: 188 PTGCSHVEIFKVAKNWRRNLRMIYQRFIW---SGTPETRKRKAKTCICRVCSTHK-NRLH 243

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C       H+ IHA        H +AVD+    ++C  C+D VYD+D +  
Sbjct: 244 SCLSCVFFGCFT---EKHIHIHAETKQ----HNLAVDLYHGVIYCFMCKDYVYDKDIE-- 294

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + L           + D+  + LM +      S+  S        
Sbjct: 295 -------KIAKETKEKILGLLMST-----AGDMSYQQLMASEVEENQSICESKEQETSLV 342

Query: 194 ------------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN 241
                          GLRGL NLGNTCFMN ++QAL   P L+ +FLSD+H    C    
Sbjct: 343 KPKKKRRKKTVYYTVGLRGLINLGNTCFMNCIVQALTRIPLLKEFFLSDKHK---CM-MT 398

Query: 242 GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGI 301
              LCL C++ ++F A++ G++ P+ P K L+  W HA +LA Y QQDAHEF I++LD +
Sbjct: 399 SPSLCLVCEMSSLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL 458

Query: 302 HEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
           H     D  +     N   CI   +F+G L+SDV C  C   STT DPC D SLDL P  
Sbjct: 459 HRHSRDDGIEQEGNLNHCNCIIDYIFTGGLQSDVTCQVCHGVSTTIDPCWDISLDL-PVS 517

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
            +  +  ST                Q   + +L  CL  FTRPE LGS  K  C +CQ  
Sbjct: 518 YTPGRAGST---------------GQKPRVISLTDCLKWFTRPEDLGSSAKIKCSRCQSY 562

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS---SILR 478
           Q+S KQ++++KLP+V+CFH+KRFEH  + K  RK++ ++ FPL LDM P+L+S   SI++
Sbjct: 563 QQSTKQLTMKKLPIVACFHLKRFEH--LGKQRRKINTFISFPLELDMTPFLASTKESIMK 620

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAW 537
            +      P +           +++ LFAV+ H G L++GHY +++R   ++W+ CDDA 
Sbjct: 621 GQPLTECVPIE-----------NKYSLFAVINHHGTLESGHYTSFVRQEKDQWFSCDDAV 669

Query: 538 ITEVNENTVRAAQGYMMFY 556
           +T+     +  ++GY++FY
Sbjct: 670 VTKATMEELLYSEGYLLFY 688


>gi|16198231|gb|AAL13936.1| LD43147p [Drosophila melanogaster]
          Length = 703

 Score =  301 bits (770), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 193/539 (35%), Positives = 278/539 (51%), Gaps = 100/539 (18%)

Query: 54  AAIRRDSSEVP----RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS 109
           A + RD+ E       C  CG S   +LYAC+ C    C     +SH+         +  
Sbjct: 237 ACVNRDARERKAIHCNCFECG-SYGIQLYACLHCIYFGCRGAHITSHL--------RSKK 287

Query: 110 HEIAVDVDRAELFCCACRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           H +A+++    L+C ACRD +YD R  + A++         + K E    ++ I + PW 
Sbjct: 288 HNVALELSHGTLYCYACRDFIYDARSREYALI---------NRKLEAKDLQKSIGWVPWV 338

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  +E +L++ NA     +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+
Sbjct: 339 PTTKETNLLLANARR--RLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 394

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH+   C SK+  + CL C++  +F   + G R P S  + L+  W HA +LA YEQQ
Sbjct: 395 SDRHD---CGSKSSHK-CLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQ 450

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGN-------------------GDC-CIAHRVFS 328
           DAHEFFI+ LD +H    K + +  S+ N                   G C CI  ++F+
Sbjct: 451 DAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFT 510

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G+L+SDV+C AC   STT+DP  D SLDL                           ++ +
Sbjct: 511 GMLQSDVVCQACNGVSTTYDPFWDISLDLG-------------------------ETTTH 545

Query: 389 CGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
            G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEH
Sbjct: 546 GGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEH 605

Query: 447 SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           S++  + RK+  ++QFP+  DM P++S         N +  F              F L+
Sbjct: 606 SAL--IDRKISSFIQFPVEFDMTPFMSEK------KNAYGDF-------------RFSLY 644

Query: 507 AVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           AVV H G +D GHY  Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 645 AVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 703


>gi|75027604|sp|Q9VVR1.3|NOT_DROME RecName: Full=Ubiquitin carboxyl-terminal hydrolase nonstop;
           AltName: Full=Deubiquitinating enzyme nonstop; AltName:
           Full=Ubiquitin thioesterase nonstop; AltName:
           Full=Ubiquitin-specific-processing protease nonstop
          Length = 735

 Score =  300 bits (769), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 192/539 (35%), Positives = 281/539 (52%), Gaps = 100/539 (18%)

Query: 54  AAIRRDSSEVP----RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS 109
           A + RD+ E       C  CG S   +LYAC+ C    C     +SH+         +  
Sbjct: 269 ACVNRDARERKAIHCNCFECG-SYGIQLYACLHCIYFGCRGAHITSHL--------RSKK 319

Query: 110 HEIAVDVDRAELFCCACRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           H +A+++    L+C ACRD +YD R  + A++         + K E    ++ I + PW 
Sbjct: 320 HNVALELSHGTLYCYACRDFIYDARSREYALI---------NRKLEAKDLQKSIGWVPWV 370

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  +E +L++ NA     +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+
Sbjct: 371 PTTKETNLLLANARR--RLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 426

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH+   C SK+  + CL C++  +F   + G R P S  + L+  W HA +LA YEQQ
Sbjct: 427 SDRHD---CGSKSSHK-CLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQ 482

Query: 289 DAHEFFISMLDGIHEKV--EKDQHKPRSQGN-----------------GDC-CIAHRVFS 328
           DAHEFFI+ LD +H      K +H+ +S  +                 G C CI  ++F+
Sbjct: 483 DAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFT 542

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G+L+SDV+C AC   STT+DP  D SLDL                           ++ +
Sbjct: 543 GMLQSDVVCQACNGVSTTYDPFWDISLDLG-------------------------ETTTH 577

Query: 389 CGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
            G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEH
Sbjct: 578 GGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEH 637

Query: 447 SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           S++  + RK+  ++QFP+  DM P++S    ++ +G+                   F L+
Sbjct: 638 SAL--IDRKISSFIQFPVEFDMTPFMSEK--KNAYGD-----------------FRFSLY 676

Query: 507 AVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           AVV H G +D GHY  Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 677 AVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 735


>gi|195591308|ref|XP_002085384.1| GD12336 [Drosophila simulans]
 gi|194197393|gb|EDX10969.1| GD12336 [Drosophila simulans]
          Length = 496

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 198/570 (34%), Positives = 283/570 (49%), Gaps = 107/570 (18%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVP----RCGVCGDSSCPRLY 78
           C H   +   +    FR I            A + RD+ E       C  CG S   +LY
Sbjct: 6   CRHYQSYVKEHSYDTFRVIDAYF-------AACVNRDARERKAIHCNCFECG-SYGIQLY 57

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYD-RDFDA 137
           AC+ C    C           H T    +  H +A+++    L+C ACRD +YD R  + 
Sbjct: 58  ACLHCIYFGCR--------GAHITSHLRSKKHNVALELSHGTLYCYACRDFIYDARSREY 109

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
           A++         + K E    ++ I + PW P  +E +L++ NA     +   N  +  G
Sbjct: 110 ALI---------NRKLEAKDLQKSIGWVPWVPTTKETNLLLANARR--RLVRPNQTI--G 156

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLG TCFMN ++QAL HTP L +YF+SDRH+   C SK+  + CL C++  +F  
Sbjct: 157 LRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD---CGSKSSHK-CLVCEVSRLFQE 212

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE-----KVEKDQHKP 312
            + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H      K E D    
Sbjct: 213 FYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHDSKSN 272

Query: 313 RSQGN--------------GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
            S                 G C CI  ++F+G+L+SDV+C AC   STT+DP  D SLDL
Sbjct: 273 SSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL 332

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS--TLMGCLDRFTRPERLGSDQKFFC 415
                                      ++ + G++  TL+ CL+R+TR E LGS  K  C
Sbjct: 333 G-------------------------ETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKC 367

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C+  QES KQ S+R LP V  FH+KRFEHS++  + RK+  ++QFP+  DM P++S  
Sbjct: 368 STCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFIQFPVEFDMTPFMSEK 425

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCD 534
             ++ +G+                   F L+AVV H G +D GHY  Y+R   + W KCD
Sbjct: 426 --KNAYGD-----------------FRFSLYAVVNHVGTIDTGHYTAYVRHQKDTWVKCD 466

Query: 535 DAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           D  IT  +   V  ++GY++FY + +L Y+
Sbjct: 467 DHVITMASLKQVLDSEGYLLFYHKNVLEYE 496


>gi|221512822|ref|NP_524140.2| non-stop [Drosophila melanogaster]
 gi|220902639|gb|AAF49249.2| non-stop [Drosophila melanogaster]
          Length = 496

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 197/570 (34%), Positives = 285/570 (50%), Gaps = 107/570 (18%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVP----RCGVCGDSSCPRLY 78
           C H   +   +    FR I            A + RD+ E       C  CG S   +LY
Sbjct: 6   CRHYQSYVKEHSYDTFRVIDAYF-------AACVNRDARERKAIHCNCFECG-SYGIQLY 57

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYD-RDFDA 137
           AC+ C    C           H T    +  H +A+++    L+C ACRD +YD R  + 
Sbjct: 58  ACLHCIYFGCR--------GAHITSHLRSKKHNVALELSHGTLYCYACRDFIYDARSREY 109

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
           A++         + K E    ++ I + PW P  +E +L++ NA     +   N  +  G
Sbjct: 110 ALI---------NRKLEAKDLQKSIGWVPWVPTTKETNLLLANARR--RLVRPNQTI--G 156

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLG TCFMN ++QAL HTP L +YF+SDRH+   C SK+  + CL C++  +F  
Sbjct: 157 LRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD---CGSKSSHK-CLVCEVSRLFQE 212

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H    K + +  S+ N
Sbjct: 213 FYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSN 272

Query: 318 -------------------GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
                              G C CI  ++F+G+L+SDV+C AC   STT+DP  D SLDL
Sbjct: 273 SSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL 332

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS--TLMGCLDRFTRPERLGSDQKFFC 415
                                      ++ + G++  TL+ CL+R+TR E LGS  K  C
Sbjct: 333 G-------------------------ETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKC 367

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C+  QES KQ S+R LP V  FH+KRFEHS++  + RK+  ++QFP+  DM P++S  
Sbjct: 368 STCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFIQFPVEFDMTPFMSEK 425

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCD 534
             ++ +G+                   F L+AVV H G +D GHY  Y+R   + W KCD
Sbjct: 426 --KNAYGD-----------------FRFSLYAVVNHVGTIDTGHYTAYVRHQKDTWVKCD 466

Query: 535 DAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           D  IT  +   V  ++GY++FY + +L Y+
Sbjct: 467 DHVITMASLKQVLDSEGYLLFYHKNVLEYE 496


>gi|255087544|ref|XP_002505695.1| predicted protein [Micromonas sp. RCC299]
 gi|226520965|gb|ACO66953.1| predicted protein [Micromonas sp. RCC299]
          Length = 462

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/486 (34%), Positives = 258/486 (53%), Gaps = 62/486 (12%)

Query: 101 ATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA------AVVLAHTTSIIQSSKPE 154
           A ++ +   H +  DV+RAEL+C AC    Y  +FD       A+ +    S    +   
Sbjct: 4   AARSFAVNPHSMFADVERAELYCAACARYTYSPEFDRLVLGTRAIAMGVRASDAGVAAAT 63

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             +KR++    P + D+ +  ++ N A+P+ S++S    +PRGLRG+ NLGNTCF+++VL
Sbjct: 64  TAKKRKK----PPTRDISKIDVVGNGAAPLASVNSHG--VPRGLRGMANLGNTCFLSTVL 117

Query: 215 QALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYS 274
            A+   P +  +FL D H R  C +K     CLAC+LD + +  + G   P  P+ FL+S
Sbjct: 118 HAVVRAPTVGGFFLKDGHVRELCTAKRDDEHCLACELDEIVAGAYSGSSDPLVPSNFLHS 177

Query: 275 WWRHA-SNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG------DC-CIAHRV 326
           WW  +  +LA ++Q DAHEFF+S++  +H  +   +     +  G      +C C  H  
Sbjct: 178 WWMQSPEHLAKHKQHDAHEFFLSLVAAVHTNLTTSERGGAGRSGGGAVLVEECRCPMHAA 237

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSS 386
           F+G+LRS+V C ACG+ ST  DP V  SLD+ P  G++   S  +S              
Sbjct: 238 FAGVLRSEVTCGACGYASTVHDPTVGLSLDV-PLSGNATGGSRQRS-------------- 282

Query: 387 QNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFE 445
                 TL  CL  F RPE +G ++ F C +C    +   KQM+ R+LP     HIKRFE
Sbjct: 283 -----VTLEACLSAFARPEHIGMNESFPCGRCGDSARAKTKQMAARRLPPALVLHIKRFE 337

Query: 446 HSSVRK---------------MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
            S V K               + RK+D ++ FP  L M PY +S+ LRSR+GNR  P D 
Sbjct: 338 TSFVGKAGSKKSGLGIGDSVVVGRKIDVHVSFPFVLSMRPYCASAALRSRYGNR-VPADA 396

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ 550
              +      ++++L+AVV H+G +++GHY+ Y++    W++CDD  +T  +  TV  AQ
Sbjct: 397 SHDD-----QAKYDLYAVVVHSGTMESGHYIAYVQWQGVWFRCDDHQVTRADPATVAQAQ 451

Query: 551 GYMMFY 556
            YM+FY
Sbjct: 452 AYMLFY 457


>gi|194871335|ref|XP_001972828.1| GG15734 [Drosophila erecta]
 gi|190654611|gb|EDV51854.1| GG15734 [Drosophila erecta]
          Length = 496

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 197/570 (34%), Positives = 284/570 (49%), Gaps = 107/570 (18%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVP----RCGVCGDSSCPRLY 78
           C H   +   +    FR I            A + RD+ E       C  CG S   +LY
Sbjct: 6   CRHYQSYVKEHSYDTFRVIDAYF-------AACVNRDARERKAIHCSCFECG-SYGIQLY 57

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYD-RDFDA 137
           AC+ C    C           H T    +  H +A+++    L+C ACRD +YD R  + 
Sbjct: 58  ACLHCIYFGCR--------GAHITSHLRSKKHNVALELSHGTLYCYACRDFIYDARSREY 109

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
           A         + + K E    ++ I + PW P  +E +L++ NA     +   N  +  G
Sbjct: 110 A---------LTNRKLEAKDLQKSIGWVPWVPTAKETNLLLANARR--RLVRPNQTI--G 156

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLG TCFMN ++QAL HTP L +YF+SDRH+   C SK+  + CL C++  +F  
Sbjct: 157 LRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD---CGSKSSPK-CLVCEVSRLFQE 212

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H    K + +  S+ N
Sbjct: 213 FYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHDSKSN 272

Query: 318 -------------------GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
                              G C CI  ++F+G+L+SDV+C AC   STT+DP  D SLDL
Sbjct: 273 SSGTGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL 332

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS--TLMGCLDRFTRPERLGSDQKFFC 415
                                      ++ + G++  TL+ CL+R+TR E LGS  K  C
Sbjct: 333 G-------------------------ETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKC 367

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C+  QES KQ S+R LP V  FH+KRFEHS++  + RK+  ++QFP+  DM P++S  
Sbjct: 368 STCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFIQFPVEFDMTPFMSEK 425

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCD 534
             ++ +G+                   F L+AVV H G +D GHY  Y+R   + W KCD
Sbjct: 426 --KNAYGD-----------------FRFSLYAVVNHVGTIDTGHYTAYVRHQKDTWVKCD 466

Query: 535 DAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           D  IT  +   V  ++GY++FY + +L Y+
Sbjct: 467 DHVITMASLKQVLDSEGYLLFYHKNVLEYE 496


>gi|91089399|ref|XP_974056.1| PREDICTED: similar to non-stop CG4166-PA [Tribolium castaneum]
 gi|270012546|gb|EFA08994.1| hypothetical protein TcasGA2_TC006701 [Tribolium castaneum]
          Length = 482

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 185/506 (36%), Positives = 261/506 (51%), Gaps = 77/506 (15%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           RC VC     P L+AC+ C    CH      H+  HA        H +++D+   ++ C 
Sbjct: 46  RCRVCKKRG-PFLHACLECVFFGCH-----KHIREHAKSQK----HSMSMDLTYGQMHCN 95

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLR-KRRRIDYRPWSPDLRERSLMVNNASP 183
            C D +YD + DA         I   +K ++   K+R  +   W+P   ER  + +    
Sbjct: 96  QCHDYIYDSEIDA---------IANDNKMKSKTCKKRLFEIDTWNPTSDERDYLRSKTKK 146

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
           I        D   GLRGL NLG TCFMN ++QAL HTP LR+YFL++ HN   C+  +G 
Sbjct: 147 I----CITPDSTIGLRGLLNLGQTCFMNCIVQALMHTPLLRDYFLTEEHN---CKGMSG- 198

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             CL C++  +F   + G R+P +  + L+  W HA +LA YEQQDAHEFFI+ LD +H+
Sbjct: 199 -RCLVCEVSKLFQEFYNGTRVPLALHELLHLIWTHARHLAGYEQQDAHEFFIATLDVLHQ 257

Query: 304 KVEKDQ--HKPRSQG-NGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
              +     KP + G N  C CI  ++F+G L+SDV+C  C   STT DP  DFSLDL P
Sbjct: 258 HCLETMPDLKPVNVGKNSRCPCIIDQIFTGGLQSDVVCQKCNGVSTTIDPISDFSLDLGP 317

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
                   +S                        L+ CL+RFTR E LG + K  C  CQ
Sbjct: 318 VTVGGRPPTS------------------------LVDCLERFTRAEHLGENSKIMCSNCQ 353

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
            +QES KQ+++  LP+V  FH+KRF+H  + +M +K+   + FP  LDM P++S S   S
Sbjct: 354 SKQESTKQLTMNTLPIVISFHLKRFQH--MNEMEKKISTTISFPEMLDMTPFMSRSKTDS 411

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLR-LSNKWYKCDDAW 537
                  PF  D         + + LFAV+ H G  ++ GHY  Y+R L + WYKCDD  
Sbjct: 412 -------PFPSD---------NRYSLFAVINHIGNSINVGHYTAYVRQLQDYWYKCDDHV 455

Query: 538 ITEVNENTVRAAQGYMMFYVQKMLYY 563
           IT      V  ++GY++FY + +L Y
Sbjct: 456 ITRATLKEVLDSEGYLLFYHKHVLDY 481


>gi|195064512|ref|XP_001996580.1| GH18640 [Drosophila grimshawi]
 gi|193895400|gb|EDV94266.1| GH18640 [Drosophila grimshawi]
          Length = 717

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 191/550 (34%), Positives = 278/550 (50%), Gaps = 111/550 (20%)

Query: 54  AAIRRDSSEVP----RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS 109
           A + RD+ E       C  CG S   +LYAC+ C    C           H T    +  
Sbjct: 240 ACVNRDAREKKAIHCNCFECG-SYGIQLYACLHCIYFGCR--------GAHITSHLRSKK 290

Query: 110 HEIAVDVDRAELFCCACRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           H +A+++    L+C ACRD +YD R  D A++         + K E    ++ + ++PW 
Sbjct: 291 HNVALELSHGTLYCYACRDFIYDNRSRDYALI---------NRKLEAKDLQKSLGWQPWI 341

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  +E +L++ NA           ++  GLRGL NLG TCFMN ++QAL HTP L +YF+
Sbjct: 342 PTPKETNLLLANAR----RRLVRPNVTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 397

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH+   C SK   + CL C++  +F   + G R P S  + L+  W HA +LA YEQQ
Sbjct: 398 SDRHD---CGSKLTHK-CLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQ 453

Query: 289 DAHEFFISMLDGIHE-----KVEKDQHKPRSQGN-------------------------G 318
           DAHEFFI+ LD +H      K E++     +  +                         G
Sbjct: 454 DAHEFFIATLDVLHRHCVKAKTEREHESKSNSASSGTGGGGTNSSSSSSSANANASHCYG 513

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            C CI  ++F+G+L+SDV+C AC   STTFDP  D SLDL                    
Sbjct: 514 QCNCIIDQIFTGMLQSDVVCQACNGVSTTFDPFWDISLDLG------------------- 554

Query: 378 CEADGMNSSQNCGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                  ++ + G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP 
Sbjct: 555 ------ETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPS 608

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V  FH+KRFEHS++  + RK+  ++QFP+  DM P++S    ++ +G+            
Sbjct: 609 VVSFHLKRFEHSAL--IDRKISSFIQFPVEFDMTPFMSEK--KNAYGD------------ 652

Query: 496 LNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMM 554
                  F L+AVV H G +D GHY  ++R   + W KCDD  IT  + N V  ++GY++
Sbjct: 653 -----FRFSLYAVVNHVGTIDTGHYTAFVRHQKDTWVKCDDHVITMASLNQVLESEGYLL 707

Query: 555 FYVQKMLYYK 564
           FY + +L Y+
Sbjct: 708 FYHKNILEYE 717


>gi|198466407|ref|XP_001353988.2| GA18001 [Drosophila pseudoobscura pseudoobscura]
 gi|198150586|gb|EAL29724.2| GA18001 [Drosophila pseudoobscura pseudoobscura]
          Length = 494

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 186/522 (35%), Positives = 271/522 (51%), Gaps = 96/522 (18%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C  CG +S  +LYAC+ C    C      SH+  H      A  H +A+++    L+C A
Sbjct: 46  CFECGSASI-QLYACLHCIYFGCR----GSHIHSHL----RAKKHHVALELSHGTLYCHA 96

Query: 126 CRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
           CRD +YD R  + A++         + K E    ++ + ++PW P  ++ +L++ N  P 
Sbjct: 97  CRDFIYDSRSREYALI---------NRKLEAKDLQKSLGWQPWIPSAKDSNLLLAN--PR 145

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
             +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+SDRH+           
Sbjct: 146 RRLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD-----CGKSSH 198

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
            CL C++  +F   + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H  
Sbjct: 199 KCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRH 258

Query: 305 VEKDQHKPRSQGN------------------GDC-CIAHRVFSGILRSDVMCMACGFTST 345
             K + +  S+ N                  G C CI  ++F+G+L+SDV+C AC   ST
Sbjct: 259 CVKAKAEHESKSNSSSSGSGTNSTSSSTSSYGQCNCIIDQIFTGMLQSDVVCQACKGVST 318

Query: 346 TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS--TLMGCLDRFTR 403
           TFDP  D SLDL                           ++ + G++  TL+ CL+R+TR
Sbjct: 319 TFDPFWDISLDLG-------------------------ETTTHGGVTPKTLIDCLERYTR 353

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
            E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEHS++  + RK+  ++QFP
Sbjct: 354 AEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFIQFP 411

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTY 523
           +  DM P++S    ++ +G+                   F L+AVV H G +D GHY  Y
Sbjct: 412 VEFDMTPFMSEK--KNAYGD-----------------FRFSLYAVVNHVGTIDTGHYTAY 452

Query: 524 LR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           +R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 453 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 494


>gi|346470779|gb|AEO35234.1| hypothetical protein [Amblyomma maculatum]
          Length = 499

 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 191/543 (35%), Positives = 279/543 (51%), Gaps = 63/543 (11%)

Query: 23  CPHLADFHARNGTKPFRAIQD---CLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           C HL       GT+ +R I     C   K        R   +++  C  C  +  PRL+A
Sbjct: 6   CAHLTALKETKGTQAYRLIHSYFVCCVSKEA------RAKKAQLCTCHTC-HARGPRLHA 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C+    + H+  HA     A  H +AVD+    ++C  C D VYDR+ +A  
Sbjct: 59  CLQCVYFGCYG---NRHIHEHA----RASQHLLAVDISYGVVYCFTCADYVYDRELEAM- 110

Query: 140 VLAHTTSIIQSSKPENLRKRRRID----YRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
                      ++    R  R +     Y  W P   E  L+  N  P     ++N  + 
Sbjct: 111 -----------ARKHRRRCARLLGLQEYYHHWEPSSFELDLLRRN--PRRKRIANNSYI- 156

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++QAL HTP LR+YFL+DRH    CQ ++   +CL C++  +F
Sbjct: 157 -GLRGLINLGNTCFMNCIVQALTHTPLLRDYFLADRH---VCQFRDDPAMCLVCEMSRLF 212

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              +CG   P+ P + L+  W HA +LA YEQQDAHEFFI+ LD +H   +       + 
Sbjct: 213 QEFYCGKSSPHIPYRLLHLVWTHARHLAGYEQQDAHEFFIATLDVLHRHCKGTNGMSTTN 272

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
            +   CI  ++F+G L+SDV+C +C   STT DP  D SLDL P        SS    H+
Sbjct: 273 PHHCNCIIDQIFTGGLQSDVVCQSCKGVSTTIDPFWDISLDLGP--------SSHLQQHN 324

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
            + EA+          ++L+ CL+RFTRPE LGS  K  C +C   QES KQ+++++LP+
Sbjct: 325 PSSEAEDTEP------TSLLDCLERFTRPEHLGSSAKIRCGRCDSYQESTKQLTMKQLPV 378

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V  FH+KRFEHSS  +  +K+   + FP  LDM+P++S     S   +          ++
Sbjct: 379 VCSFHLKRFEHSS--RFHKKISSLISFPQYLDMSPFMSGPRAPSSNSSSTSASAKGRPSS 436

Query: 496 LNEPS------SEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRA 548
            +         +++ LFAVV H+G ++ GHY  Y+R   + W+KCDD  IT  +   V  
Sbjct: 437 PSSAPPQPCHDNKYCLFAVVNHSGTIETGHYTAYVRQHRDHWFKCDDHLITRASLQDVLD 496

Query: 549 AQG 551
           ++G
Sbjct: 497 SEG 499


>gi|389749145|gb|EIM90322.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
          Length = 689

 Score =  298 bits (762), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 200/583 (34%), Positives = 287/583 (49%), Gaps = 110/583 (18%)

Query: 20  PQPCPHLADFHARNG-----TKPFRAI--------QDCLHIKPPGGRAAIRRDSSEVPRC 66
           P  CPH+    +  G      K ++A          D +H       +A RR  S  P C
Sbjct: 31  PAKCPHIMSALSDEGERGMLVKKYKAAVAWSARRSHDAVH-------SAKRRKLSS-PEC 82

Query: 67  GVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCAC 126
           G CG     R + C++C    C           HAT+  +   H   VDV    +FC  C
Sbjct: 83  GTCG-IVMHRPFVCLSCGYAGCWN-------GEHATEHLADEGHPFCVDVKLGSVFCSEC 134

Query: 127 RDQVYDRDFDAAVVLAHTTSIIQSSKPENLR--KRRRIDYRPWSPDLRERSLMVNNASPI 184
            D VYD  FD    + HTT +    K    +  KRRR  Y  W+P            S I
Sbjct: 135 DDFVYDGTFDG---IFHTTVLDVEEKTTKFQVAKRRREAYHSWTP------------SSI 179

Query: 185 DSMS-SSNGDLP-RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           D+ +     +LP +G RGL NLG TCF+N +LQ++ H P LRNYFLSD+HN   C++KN 
Sbjct: 180 DTAALEETANLPCQGRRGLLNLGQTCFLNVILQSIAHNPLLRNYFLSDKHNSKLCKAKN- 238

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C  C++D +F+ I+     PY PA  L + WR +++++ Y QQDAHE FI++L  IH
Sbjct: 239 ---CTCCEMDNLFTEIYTPSATPYGPASLLSTTWRVSADISGYAQQDAHECFIALLTAIH 295

Query: 303 EKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
           E         R + N  C C+ H  F+G L+SDV C  CG  ++T DPC+D +L LE  +
Sbjct: 296 ET-------SRGRTNVSCNCVVHNTFAGQLQSDVKCERCGNVTSTLDPCLDVNLTLEGGK 348

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
                                         +TL GCL RFT PERLGS +++ CQ+C  +
Sbjct: 349 -----------------------------PNTLDGCLKRFTTPERLGS-KEYTCQKCTGK 378

Query: 422 Q---ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS-RKVDRYLQFPLSLDMAPYLSSSIL 477
           Q   E+ K++SI+KLP V  F  KRFEH S  ++S +K+D  ++ P S++MAPY + ++ 
Sbjct: 379 QTNGEASKRLSIKKLPPVLSFQFKRFEHKSQDRLSAQKIDAPVRVPASINMAPYTTLALS 438

Query: 478 RS------------RFGNRFFPFDGDESNTLNEPSS--EFELFAVVTHTGKLDAGHYVTY 523
            +            +   +  P D     +   P +  E++LFAV+ H G++D GHY  +
Sbjct: 439 SAASPVNGAANGAGKVKVKIQPEDVLSQFSYPGPEAMYEYDLFAVINHEGQIDNGHYTNF 498

Query: 524 LRLSNKWYKCDDAWITEVNENTVR--AAQGYMMFYVQKMLYYK 564
            R  ++WY+ DD  +       V    A  YM FYV++ L YK
Sbjct: 499 ARFRDEWYRFDDDKVYPSTLPNVLNPPAPVYMAFYVKRRLDYK 541


>gi|170033448|ref|XP_001844589.1| ubiquitin carboxyl-terminal hydrolase 22 [Culex quinquefasciatus]
 gi|167874437|gb|EDS37820.1| ubiquitin carboxyl-terminal hydrolase 22 [Culex quinquefasciatus]
          Length = 546

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 195/593 (32%), Positives = 280/593 (47%), Gaps = 103/593 (17%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H   F    G +PF  +     +         RR  +    C  CG S  P+LY+C+ 
Sbjct: 6   CAHFGAFVKEYGLEPFSVVHAYFSVCI---NKEARRRKALSCLCFKCGGSG-PQLYSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C      +H+  H  +T     H I +++    ++C  C+D +YD +  A     
Sbjct: 62  CIYFGCK----GAHIGEHCKQTK----HYIVLELSYGMIYCHQCKDFIYDAECQAIA--- 110

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
               I + +K  N    + + +RPWSP   E  L++ N       + ++     GLRGL 
Sbjct: 111 -EKHIKKEAKSLN----KSLSWRPWSPSKLEIDLLLKNPKRRHVTAVTS----IGLRGLL 161

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLG+TCFMN ++QAL HTP LR+YFLS+RH    C +K   + CL C++  +F   + G 
Sbjct: 162 NLGSTCFMNCIVQALIHTPLLRDYFLSERHE---CTAKTAAK-CLVCEVSRLFQEFYSGA 217

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH------------------EK 304
           R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H                  EK
Sbjct: 218 RGPLSLHRLLHLIWNHARHLAGYEQQDAHEFFIATLDVLHRHCKISMTEMAAAAAAAAEK 277

Query: 305 VEKDQHKPRSQGNGDC------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
             K    P    + D       CI  ++F+G L+SDV+C AC   STT DP  D SLDL 
Sbjct: 278 SNKPHQPPPPPPHQDSNPTQCNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDL- 336

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
                                 +  N        +L+ CL+RFTR E LGS  K  C  C
Sbjct: 337 ---------------------GEAQNQGYGGPPKSLIDCLERFTRAEHLGSSAKIKCSTC 375

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS--- 475
           +  QES KQ+S+R LP+V+ FH+KRFEHSS+  + +K+  ++ FP  LDM P++S     
Sbjct: 376 KSYQESTKQLSMRTLPIVASFHLKRFEHSSL--IDKKISTFISFPAELDMTPFMSKKKSD 433

Query: 476 -------------------ILRSRFGNRFFPFDGDESNTLNEPSS----EFELFAVVTHT 512
                                  +  ++      DE+       +     + L+AV+ H 
Sbjct: 434 QSNPSTSSTSSSSHSSKSKSSDRKQQHQQAQQSNDEATAAAATDASGDFRYSLYAVINHV 493

Query: 513 GKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           G LDAGHY  Y+R   + W KCDD  IT      V  ++GY++FY +K+L Y+
Sbjct: 494 GTLDAGHYTAYVRHQKDIWVKCDDHIITTATLKQVLDSEGYLLFYHKKVLEYE 546


>gi|390479780|ref|XP_003735780.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 22-A-like [Callithrix jacchus]
          Length = 759

 Score =  294 bits (752), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 192/560 (34%), Positives = 281/560 (50%), Gaps = 67/560 (11%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 248 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 303

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 304 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 356

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         +  W     E  L+ +N       SS
Sbjct: 357 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTRPELELLGHNPRRRRITSS 416

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 417 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPS-PELCLVC 468

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 469 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 528

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 529 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 587

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  Q S KQ+
Sbjct: 588 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQASTKQL 641

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++ KLP+V+C H +R EHS+ R    ++  Y+ F L LDM                    
Sbjct: 642 TMTKLPVVACXHFRRVEHSANRXA--QITTYISFLLELDMX------------------- 680

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVR 547
                       +++ LFAVV     L++GHY +++R   ++W+KCDDA IT+ +   V 
Sbjct: 681 ----------XENKYSLFAVVXSPKNLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVL 730

Query: 548 AAQGYMMFYVQKMLYYKASE 567
            ++GY++FY +++L +++ +
Sbjct: 731 DSEGYLLFYHKQVLEHESEK 750


>gi|195440202|ref|XP_002067931.1| GK11483 [Drosophila willistoni]
 gi|194164016|gb|EDW78917.1| GK11483 [Drosophila willistoni]
          Length = 718

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 199/599 (33%), Positives = 284/599 (47%), Gaps = 136/599 (22%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVP----RCGVCGDSSCPRLY 78
           C H   +   +    FR I            A + +D+ E       C  CG+    +LY
Sbjct: 199 CRHYQSYVKEHSYDTFRVIDAYF-------AACVNKDAREKKSIHCNCFECGNYG-IQLY 250

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYD-RDFDA 137
           AC+ C    C     +SH+         A  H IA+++    L+C  CRD +YD R  + 
Sbjct: 251 ACLHCIYFGCRGAHITSHL--------RAKKHNIALELSHGTLYCYGCRDFIYDSRSREY 302

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
           AV+         + K E    ++ + ++PW P  +E +L++ N      +   N  +  G
Sbjct: 303 AVI---------NRKLEAKDLQKSLGWQPWVPSAKETNLLLANTRR--RLVRPNQTI--G 349

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLG TCFMN ++QAL HTP L +YF+SDRH+   C SK+  + CL C++  +F  
Sbjct: 350 LRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD---CGSKSTHK-CLVCEVSRLFQE 405

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H    K + +  S+ N
Sbjct: 406 FYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSN 465

Query: 318 ------------------------------------------------GDC-CIAHRVFS 328
                                                           G C CI  ++F+
Sbjct: 466 SSSSSGGGSGGGGSGGGGSGGGSGGGSGSSGSGSNNNSSNSSSSSHCYGQCNCIIDQIFT 525

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G+L+SDV+C AC   STTFDP  D SLDL                        G  +S  
Sbjct: 526 GMLQSDVVCQACNGVSTTFDPFWDISLDL------------------------GETTSHG 561

Query: 389 CGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
            G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEH
Sbjct: 562 -GVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEH 620

Query: 447 SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           S++  + RK+  ++QFP+  DM P++S         N +  F              F L+
Sbjct: 621 SAL--IDRKISSFIQFPVEFDMTPFMSEK------NNSYGDF-------------RFSLY 659

Query: 507 AVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           AVV H G +D GHY  Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 660 AVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 718


>gi|119613630|gb|EAW93224.1| hCG201263, isoform CRA_b [Homo sapiens]
          Length = 584

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 159/368 (43%), Positives = 225/368 (61%), Gaps = 23/368 (6%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H            LCL C++ ++F 
Sbjct: 234 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPS----LCLVCEMSSLFH 289

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
           A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H +  KD    +   
Sbjct: 290 AMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH-RHSKDDSGGQEAN 348

Query: 317 NGDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           N +CC  I  ++F+G L+SDV C AC   STT DPC D SLDL P   ++  + + +   
Sbjct: 349 NPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL-PGSCATFDSQNPERAD 407

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
           S     D +      GI +L  CL  FTRPE LGS  K  C  CQ  QES KQ++++KLP
Sbjct: 408 STVSRDDHIP-----GIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLP 462

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEH  V K  RK++ ++ FPL LDM P+L+S+   SR      P D     
Sbjct: 463 IVACFHLKRFEH--VGKQRRKINTFISFPLELDMTPFLAST-KESRMKEGQPPTD----C 515

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYM 553
             NE  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT+     +  ++GY+
Sbjct: 516 VPNE--NKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 573

Query: 554 MFYVQKML 561
           +FY ++ L
Sbjct: 574 LFYHKQGL 581


>gi|355704804|gb|EHH30729.1| hypothetical protein EGK_20499, partial [Macaca mulatta]
 gi|355757363|gb|EHH60888.1| hypothetical protein EGM_18779, partial [Macaca fascicularis]
          Length = 331

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/370 (42%), Positives = 223/370 (60%), Gaps = 42/370 (11%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C++ ++F  ++
Sbjct: 1   GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVCEMSSLFRELY 56

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D     +     
Sbjct: 57  SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNH 116

Query: 320 C-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           C CI  ++F+G L+SDV C AC   STT DPC D SLDL  +  SS+             
Sbjct: 117 CNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSWESSVN------------ 164

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                  S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+++ KLP+V+C
Sbjct: 165 -----GESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVAC 219

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
           FH KRFEHS+  K  RK+  Y+ FPL LDM P+++S  + +  GN             NE
Sbjct: 220 FHFKRFEHSA--KQRRKITTYISFPLELDMTPFMAS--MPTNSGN-------------NE 262

Query: 499 PSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
             +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY 
Sbjct: 263 --NKYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYH 320

Query: 558 QKMLYYKASE 567
           +++L +++ +
Sbjct: 321 KQVLEHESEK 330


>gi|312091085|ref|XP_003146855.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
 gi|307757982|gb|EFO17216.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
          Length = 497

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 194/545 (35%), Positives = 277/545 (50%), Gaps = 69/545 (12%)

Query: 22  PCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           PC H+   H R  +K    +   + I P   +A  R   ++  RC  C       + AC 
Sbjct: 4   PCKHIGK-HQRTLSKTLNNVVYAV-IFPNNTKA--REVHAKYIRCIQCKTRLNALMCACC 59

Query: 82  ACAAVSCHVPPHSSHVAIH-ATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
            C+  +C      +H+  H ATK      H  AV V+   ++CC C D VYDR+ + A  
Sbjct: 60  QCSTFAC-----LTHMQDHLATK-----EHLFAVSVETGFIYCCQCGDFVYDREMEDA-- 107

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPID-------SMSSSNGD 193
                        EN  +R        S +L  RS+    A+ +D        M   +  
Sbjct: 108 ---------RRDAENGCRR--------SLNLSTRSIWYPGAAVVDICHDDPTRMVRFSRS 150

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL-CLACDLD 252
             RGLRGL NLGNTCFMN ++QA+ HTP L++YFL+D+H   +C S +  +  CL C+L 
Sbjct: 151 SIRGLRGLVNLGNTCFMNCIIQAIVHTPHLKDYFLTDQH---HCASSSYSKAQCLMCELS 207

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
             F   + GD  PY P +FL   W HA +LA YEQQDAHEFFI+ LD +H          
Sbjct: 208 NTFQEFYKGDVTPYKPNRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHR--HSGSSSL 265

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
            S  N   CI   +F+G L+SD+ C  CG  STT DP  D SLD+      S  +SS   
Sbjct: 266 PSTPNECNCIIDWIFTGKLQSDLTCSICGCVSTTVDPFWDISLDVAQEVLRSPSSSSGSL 325

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
                               TL  CL R+  PE LGS+ K  C +C+  +ES KQ++++ 
Sbjct: 326 QQ-----------------ITLEDCLHRYIMPEHLGSNAKTKCARCETYEESTKQLTLKT 368

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           LP+V+CFH+KRFEHS   K  +K+D  +++P  +DM P+ +S   R R            
Sbjct: 369 LPMVACFHLKRFEHS--HKDRKKMDTKIKYPQFIDMTPFTAS--FRERSTGAPQNKTSVV 424

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQG 551
           ++ L    +++ELFAVV H G +++GHY  Y+R   N+W++CDD  +T+V    V ++QG
Sbjct: 425 TDLLTTNRNKYELFAVVNHLGTMESGHYTCYIRHQRNQWFQCDDQKVTKVPTERVLSSQG 484

Query: 552 YMMFY 556
           Y++FY
Sbjct: 485 YLLFY 489


>gi|170086608|ref|XP_001874527.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649727|gb|EDR13968.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 540

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 183/519 (35%), Positives = 257/519 (49%), Gaps = 61/519 (11%)

Query: 53  RAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEI 112
           R   +R     P CGVC D +  R +AC+ C    C +  H       A        H  
Sbjct: 43  RNPAKRRKVFAPMCGVC-DLALSRPFACLHCDFAGCWLEGH-------ALGHLRDAGHNF 94

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLR 172
             D     +FC  C+D +Y    D   + A   +  Q +K + + K+ R  Y+ W P+ +
Sbjct: 95  CADTKTGSIFCAQCQDFIYHPKVDEIYLAAVVMTEEQQTKFQ-VSKKLREPYQIWVPEAK 153

Query: 173 ERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH 232
           +  L + N+ PI   +          RGL NLG TCF+N VLQ+  H P LRNYFLSD+H
Sbjct: 154 D-ILALKNSVPIPCQAR---------RGLLNLGQTCFLNVVLQSFAHNPLLRNYFLSDKH 203

Query: 233 NRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHE 292
           N   C+++     C  C++D +F+ I+  D  PY P  FL + WR ++ L+ Y QQDAHE
Sbjct: 204 NSKQCKTET----CTCCEMDKLFTEIYSEDPNPYGPITFLATTWRASAELSGYAQQDAHE 259

Query: 293 FFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
           FFIS L+ IH          R      C CI H  F+G L+SDV C  CG  + T DP +
Sbjct: 260 FFISALNQIHS-------TSRGSTEVSCNCIIHSTFAGQLQSDVKCERCGNITNTIDPML 312

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SL+L+   G                 A G          TL  CL RFT+ E+LG  +
Sbjct: 313 DISLELKGKGGEV---------------APG---------DTLAACLRRFTQFEKLGP-K 347

Query: 412 KFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS-RKVDRYLQFPLSLDMA 469
           ++ C +C ++  E+ K++SIR LP V  F  KRFEH +  K S RK+D  ++FP S++MA
Sbjct: 348 EYTCSKCAKISHEASKRLSIRTLPPVLSFQFKRFEHKTNDKSSARKIDAQVRFPASINMA 407

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNK 529
           PY +  I      N     D   +    E   E++LFAV+ H G++D GHY  Y    ++
Sbjct: 408 PYTTLVIKDMEGAN---ANDARYTCPAPEVMYEYDLFAVINHEGQIDTGHYTNYACFQDE 464

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEK 568
           WYK DD  +T        A+  YM FYV++ L YK + K
Sbjct: 465 WYKFDDDKVTPSTLGACLASAAYMCFYVKRHLDYKPNIK 503


>gi|392564325|gb|EIW57503.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
          Length = 555

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 186/561 (33%), Positives = 274/561 (48%), Gaps = 76/561 (13%)

Query: 20  PQPCPHLADFHARNGTKP-----FRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSC 74
           P  CPHLA   + +  +      ++ +      +      + +R     P CG+CG  S 
Sbjct: 10  PGKCPHLAAVFSDDSERGALLNRYKTVVSWNTHRNHNIAYSAKRRKITPPDCGLCG-LSL 68

Query: 75  PRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRD 134
            R YAC+ C++ +C       H+  H   T     H+   DV    +FC  C D VYD  
Sbjct: 69  SRPYACLHCSSAACW---SGGHIKQHLQDTG----HDFCADVKTGYVFCIECDDFVYDGT 121

Query: 135 FDAAVVLAHTTSIIQSSKPE--NLRKRRRIDYRPWSPDLRERSLMVNN-ASPIDSMSSSN 191
           F+    L   TSI    K     + KR R  + PW P+ +E++ +    A+P        
Sbjct: 122 FNR---LFRATSIAAEEKATAFEVSKRLREPFTPWEPNGQEQAALEGAIATPC------- 171

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
               +G RGL NLG TCFMN +LQ+    P LRNY+L D+HN   C+ K+    C +C++
Sbjct: 172 ----QGRRGLLNLGQTCFMNVILQSFIANPLLRNYYLGDKHNSRLCKLKD----CTSCEM 223

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
           D + + ++  +  PY P + L   WR +  ++ Y QQDAHEFFI+ L+ IH         
Sbjct: 224 DKLLAEVYSENNAPYGPIELLAKTWRTSPEMSGYAQQDAHEFFITALNHIHAT------- 276

Query: 312 PRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
            R   +  C CI H  F+G+L+SDV C  CG  +   DP +D SL+L+            
Sbjct: 277 SRGSTSLQCICIIHSTFAGLLQSDVKCERCGNVAEKTDPMLDISLELK------------ 324

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
                      G  S ++    TL  CL R+T PE+LG +  + C++C     + K++SI
Sbjct: 325 -----------GETSGEDL---TLASCLRRYTHPEKLGPNN-YSCEKCGKASHASKRLSI 369

Query: 431 RKLPLVSCFHIKRFEHSSV-RKMSRKVDRYLQFPLSLDMAPYLS-----SSILRSRFGNR 484
           RKLP V  F  KRFEH SV R  +RK++  ++FP SL+MAPY +       +L+      
Sbjct: 370 RKLPPVLSFQFKRFEHKSVDRSAARKIEARVRFPSSLNMAPYTTLVMHKQELLKDGGAAS 429

Query: 485 FFPFDGDESNTLN-EPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
             P       +L  E   E++LFAVV H G++D GHY  Y R  ++WY+ DD  ++    
Sbjct: 430 ASPASLIPDRSLGPETLYEYDLFAVVCHEGQIDNGHYTCYARSHDEWYRYDDDKVSHSTL 489

Query: 544 NTVRAAQGYMMFYVQKMLYYK 564
                +Q YM FYV++ L YK
Sbjct: 490 GACLNSQAYMCFYVKRHLDYK 510


>gi|324513934|gb|ADY45703.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Ascaris suum]
          Length = 494

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 191/544 (35%), Positives = 277/544 (50%), Gaps = 58/544 (10%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H+A  H R+  K    +     I  P   A+ R   ++  RC  C    C  + AC  
Sbjct: 5   CVHIAK-HRRSLAKTLNTV--IFSIIFPDNDAS-RVVQAKYVRCRQCRTRLCSLMCACCE 60

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C+  +C       H+  H  +      H  A  V    ++C  C D VYDR  + A   A
Sbjct: 61  CSTFAC-----IQHMRTHLKEKG----HSFAFSVQTGFVYCKRCNDFVYDRRMERARREA 111

Query: 143 HTTSIIQSSKPENLRKRRRIDYR-PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGL 201
              +          R+   +  R  W PD    +L+         M+    +  RGLRGL
Sbjct: 112 ENAA----------RRSLSLSTRCLWHPD---SALVETLRYEPTMMTRFTRNTSRGLRGL 158

Query: 202 NNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCG 261
            NLGNTCFMNS++QA+ HTP L++YF++D+H        N    CL C+L   F   + G
Sbjct: 159 VNLGNTCFMNSIIQAMVHTPHLKDYFMTDQHRCLTPSHPNSQ--CLMCELSNTFQEFYKG 216

Query: 262 DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC- 320
           D  PY P +FL   W HA +LA YEQQDAHEFFI+ LD +H            Q   +C 
Sbjct: 217 DITPYKPHRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHRHSGSSSLPTTPQ---ECN 273

Query: 321 CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEA 380
           CI   +F+G L+SD+ C+ CG  STT DP  D SLD+   Q + +  S           A
Sbjct: 274 CIIDWIFTGKLQSDLTCLNCGGVSTTVDPYWDISLDV--GQEALLSPS-----------A 320

Query: 381 DGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFH 440
           DG + S       L  CL R+ RPE+LGS  K  C +C   +ES KQ++++ LP+V+CFH
Sbjct: 321 DGPHIS-------LEDCLQRYIRPEQLGSAAKIKCARCNTYEESTKQLTLKTLPMVACFH 373

Query: 441 IKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPS 500
           +KRFEH+S  K  +K+D  + FP  +DM P+  ++  R R       ++   ++ L +  
Sbjct: 374 LKRFEHNS--KHRKKMDTKVYFPQFIDMTPF--TAAYRERSIGHEQKWNSVVADALTKNR 429

Query: 501 SEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           +++ELFAVV H G +++GHY  ++R   N+W++CDD  I+     TV A++GY++FY + 
Sbjct: 430 NKYELFAVVNHDGTMESGHYTCFIRHQHNQWFQCDDQIISRAPVETVLASEGYLLFYHKS 489

Query: 560 MLYY 563
            L Y
Sbjct: 490 HLDY 493


>gi|26390088|dbj|BAC25840.1| unnamed protein product [Mus musculus]
          Length = 519

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 245/467 (52%), Gaps = 37/467 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 25  VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCVCHVCG-THLNR 80

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD D +
Sbjct: 81  LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDIDIE 133

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    + +++         Y  W     E  L+ +N       SS
Sbjct: 134 QIAKEEQGEALKLQASTSTEVSQQQCSVPGLGEKYPTWETTKPELELLGHNPRRRRIASS 193

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 194 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 245

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 246 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 305

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 306 VGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 364

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 365 SPGRESSLNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 418

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
           +++KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS
Sbjct: 419 TMKKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASS 463


>gi|158300513|ref|XP_320409.4| AGAP012119-PA [Anopheles gambiae str. PEST]
 gi|157013195|gb|EAA00215.4| AGAP012119-PA [Anopheles gambiae str. PEST]
          Length = 527

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 194/576 (33%), Positives = 278/576 (48%), Gaps = 106/576 (18%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H A +    G +P+  +            A +R+  S +  C  CG SS P+LY C+ 
Sbjct: 11  CVHFATYVKEYGYEPYSYVHGYFS-ACVNKEARLRKALSCL--CYKCG-SSGPQLYCCLH 66

Query: 83  CAAVSC---HVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C   +C   H+  H  H             H +A+++    L+C  CRD +Y        
Sbjct: 67  CIYFACKGAHITEHYKHT-----------KHFMALELCYGMLYCYQCRDFIY-------- 107

Query: 140 VLAHTTSIIQSSKPENLRKR---RRIDYRPWSPDLRERSLMVNNAS--PIDSMSSSNGDL 194
              H+     + +   L  R   + + +RPWSP   E  L++ N     + +++S     
Sbjct: 108 ---HSKCQTIAERHLWLEARSLDKSLSWRPWSPSRLEIELLLKNPKRRHVTALTSI---- 160

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLG+TCFMN ++QAL HTP LR+YFL++ H    C +K   + CL C++  +
Sbjct: 161 --GLRGLLNLGSTCFMNCIVQALIHTPLLRDYFLAELHE---CTAKTAAK-CLVCEVSRL 214

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           F   + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H   +   +  + 
Sbjct: 215 FQEFYSGARGPLSLHRLLHLIWNHARHLAGYEQQDAHEFFIATLDVLHRHCKTGSNYLQQ 274

Query: 315 QGNGD---C-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL-EPNQGSSMKTSS 369
           Q   +   C CI  ++F+G L+SDV+C AC   STT DP  D SLDL E + G       
Sbjct: 275 QAEPNQTQCNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGESSNGQGGYGGP 334

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
            +S                     L+ CL+RFTR E LGS  K  C +C   QES KQ+S
Sbjct: 335 PRS---------------------LIDCLERFTRAEHLGSSAKIKCNKCNSYQESTKQLS 373

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI------------- 476
           +R LP+V+ FH+KRFEHSS+  + +K+  ++ FP  LDM P++S  +             
Sbjct: 374 MRTLPIVASFHLKRFEHSSL--IDKKISTFISFPAELDMTPFMSQIMSDQQQQQQQQQSA 431

Query: 477 -------LRSRFGNRFFPFDGDESNT-LNEPSS------------EFELFAVVTHTGKLD 516
                    S F  R    +G  + T LN  S+             + L+AV+ H G LD
Sbjct: 432 VPHSPSSSSSNFNERTGGANGSSTGTSLNSDSTARLPVDKSTTDFRYSLYAVINHVGTLD 491

Query: 517 AGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQG 551
           AGHY  Y+R   + W KCDD  IT      V  ++G
Sbjct: 492 AGHYTAYVRHQKDIWVKCDDHIITTATLQQVLDSEG 527


>gi|336371142|gb|EGN99482.1| hypothetical protein SERLA73DRAFT_168890 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 531

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 178/525 (33%), Positives = 266/525 (50%), Gaps = 79/525 (15%)

Query: 46  HIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTS 105
           H+  P  R  I       P C  C   +  R + C+ C+   C     +SH+  H    +
Sbjct: 36  HVTHPAKRRKI-----SAPACDTC-QLALTRPFVCLHCSNTGCW---SNSHIISHLRDAN 86

Query: 106 SACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYR 165
               H   VD     +FC  C D +YD   D   +   +T I    K  N + R    Y 
Sbjct: 87  ----HTFCVDAKSGAVFCAECDDIIYDTTLDNVFL---STVISVEEKHTNFQGREA--YV 137

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGNTCFMNSVLQALFHTPPLR 224
            W+P   + + +                LP +G RGL NLG TCF+N +LQ+  H P LR
Sbjct: 138 AWTPTEEDNAALRGTVI-----------LPCQGRRGLLNLGQTCFLNVILQSFIHNPLLR 186

Query: 225 NYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLAS 284
           NYFLSDRHN   C+  +    C+ C++D +F+ I+     P+ P  FL + W+ +S ++ 
Sbjct: 187 NYFLSDRHNSKLCKHAH----CICCEMDKLFTEIYSPTSTPFGPTSFLATTWKVSSEMSG 242

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFT 343
           Y QQDAHEFFI+ L  IH          R   N  C CI H  F+G L+SDV C  CG  
Sbjct: 243 YAQQDAHEFFITALALIHGTC-------RGSTNVSCNCIIHSTFAGALQSDVTCERCGNI 295

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           ++T DP +D SL+L+       KTS    N                   TL GCL RFT+
Sbjct: 296 TSTVDPMLDISLELKS------KTSEAGDN-------------------TLAGCLRRFTQ 330

Query: 404 PERLGSDQKFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS--RKVDRYL 460
           PE+LGS +++ C +C +   E+ K++S+RKLP V  F  KRFEH ++ K S  +K+D  +
Sbjct: 331 PEKLGS-KEYSCSKCSKASHEANKRLSVRKLPPVLSFQFKRFEHKNMSKFSSPQKIDTPI 389

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN-EPSSEFELFAVVTHTGKLDAGH 519
           +FP+ L+MAPY  ++++ +  G      + ++ + L  +   E++LFAV+ H G++D GH
Sbjct: 390 RFPVMLNMAPY--TTLVMNAKGK-----ESEKGHDLGPDAMYEYDLFAVINHEGQMDNGH 442

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           Y  + R  ++WY+ DD  +T+ +     ++  YM FYV++ L YK
Sbjct: 443 YTNFARFQDEWYRFDDDKVTQSSLGACLSSPAYMCFYVKRHLDYK 487


>gi|390594557|gb|EIN03967.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 560

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 181/526 (34%), Positives = 260/526 (49%), Gaps = 80/526 (15%)

Query: 57  RRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDV 116
           +R     P CG C   +  R +AC++C    C      +H+  H         H+  VD 
Sbjct: 57  KRRKISSPTCGSC-RLTLSRPFACLSCTFTGCWTR-RDNHIVAHLEDND----HDFCVDA 110

Query: 117 DRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLR--KRRRIDYRPWSPDLRER 174
               ++C  C D +YD   +    L   T + Q  K    +  K+ R  Y+PW P     
Sbjct: 111 QSGSIYCARCSDFIYDPAIEELQAL---TLLSQEEKATRFQYAKQLREPYKPWKPSDVPS 167

Query: 175 SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           S++ ++ +PI   S          RGL NLG TCF+N VLQ+L H P LRNYFL D+HN 
Sbjct: 168 SIL-SDYTPIPCQSR---------RGLLNLGQTCFLNVVLQSLIHNPLLRNYFLGDKHNV 217

Query: 235 YYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             C+ K     C  C++D +F  ++ G++ PY P  FL + W+ +S L+ Y QQDAHE F
Sbjct: 218 RLCKLKE----CTCCEMDALFREVYSGEQAPYGPTSFLATLWKASSELSGYAQQDAHECF 273

Query: 295 ISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
           IS+L+ IH          R   N  C CI H  F G L+SDV C  CG  +TT DP +D 
Sbjct: 274 ISILNQIH-------GTSRGSTNVSCNCIIHSTFQGQLQSDVRCERCGNVTTTTDPMLDV 326

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           +L+L   +G   K S                     G +TL+GCL RFT PE+LG  +++
Sbjct: 327 NLEL---RGKGGKVS---------------------GENTLLGCLTRFTHPEKLGP-KEY 361

Query: 414 FCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEH-SSVRKMSRKVDRYLQFPLSLDMAPY 471
            C +C +   E+ K+MSIRKLP    F  KRFEH SS +  ++K+D  ++ P  L+M PY
Sbjct: 362 SCSRCAKGSHEATKRMSIRKLPPALSFQFKRFEHKSSDKATAQKIDAPVRIPSMLNMQPY 421

Query: 472 LSSSILRSRFGNRFFPFDGDESNT-----LNEPSS----EFELFAVVTHTGKLDAGHYVT 522
            +           F    G+E  +        P      E++LFAV+ H G++D GHY  
Sbjct: 422 TT-----------FIMNGGNEKGSGSAGGFGHPGPGELYEYDLFAVICHEGQIDNGHYYN 470

Query: 523 YLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEK 568
           + R  ++WY+ DD  +T  N      +  YM FYV++ L Y+ + K
Sbjct: 471 FARFQDEWYRFDDDKVTHSNLKECLNSPAYMCFYVKRHLEYRQNRK 516


>gi|395332362|gb|EJF64741.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
          Length = 548

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 176/512 (34%), Positives = 254/512 (49%), Gaps = 59/512 (11%)

Query: 57  RRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDV 116
           +R     P CGVC      R YAC+ C+   C       H+  H   +     H++ VDV
Sbjct: 51  KRRKIAPPECGVC-QLPLSRPYACLHCSMACCW---QDKHIQRHLQDSG----HDLCVDV 102

Query: 117 DRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSL 176
               +FC  C D VYD     A    +      +++ E+  K+ R  +  W P  +E   
Sbjct: 103 KTGYVFCIECDDFVYDSTLVRAYSSLNLRIQETATRFEDKSKKGREPFVAWVPSTQE--- 159

Query: 177 MVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYY 236
                  + ++ S+     +G RGL NLG TCFMN +LQ+    P LRNY+LSD+HN   
Sbjct: 160 -------VAALESTLPAPCQGRRGLLNLGQTCFMNVILQSFIANPLLRNYYLSDKHNSKL 212

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
           C+ K+    C +C++D ++S I+  +  PY P   L   WR +S L+ Y QQDAHEFFI+
Sbjct: 213 CKVKD----CTSCEMDKLYSEIYSENSTPYGPIDLLAKMWRVSSELSGYAQQDAHEFFIT 268

Query: 297 MLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
            L+ IH          R   +  C CI H  F+G+L+SDV C  CG  +   DP +D SL
Sbjct: 269 ALNQIHA-------TSRGSTSLQCICIIHSTFAGLLQSDVKCERCGKVADKTDPMLDISL 321

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
           +L+   G+                             TL  CL RFT PE+LG ++ + C
Sbjct: 322 ELKGETGNEQTL-------------------------TLASCLRRFTHPEKLGPNE-YSC 355

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRK-MSRKVDRYLQFPLSLDMAPYLSS 474
           ++C     + K++SIRKLP V  F  KRFEH SV K  +RK++  ++FP SL+MAPY + 
Sbjct: 356 EKCGKASHASKRLSIRKLPPVLSFQFKRFEHKSVDKSAARKIEAPVRFPASLNMAPYTTL 415

Query: 475 SILR-SRFGNRFFPFDGDESNTLNEPS-SEFELFAVVTHTGKLDAGHYVTYLRLSNKWYK 532
            + +  +      P        L   S  E++LFAVV H G++D GHY  + R  ++WY+
Sbjct: 416 VMHKQEQLKESSAPASLIPDRNLGPASLYEYDLFAVVCHEGQIDNGHYTCFARSHDEWYR 475

Query: 533 CDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
            DD  +T         +Q YM FYV++ L YK
Sbjct: 476 YDDDKVTHSTLGACLNSQAYMCFYVKRHLDYK 507


>gi|393221330|gb|EJD06815.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
          Length = 506

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 174/523 (33%), Positives = 254/523 (48%), Gaps = 85/523 (16%)

Query: 53  RAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEI 112
           R A +R   + P CG CG     R + C+ C+   C      SH+  H    +    H+ 
Sbjct: 17  RRAAKRRKLQTPTCGTCG-LVLHRPFICLHCSYGGCW---KDSHILAHMKDLN----HQF 68

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENL--RKRRRIDYRPWSPD 170
             DV    +FC  C D + D  F+    L H T++    K      +++RR  Y+PW P+
Sbjct: 69  CADVKTGSVFCIECDDMIADDTFEE---LFHATTLHVEEKETTFVSQRKRRETYKPWQPE 125

Query: 171 LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSD 230
            ++ +          ++SS+      G  GL NLG TCF+N +LQ+  H P LRNYFLSD
Sbjct: 126 AKDEA----------ALSSATQVACSGRIGLLNLGQTCFLNVILQSFLHNPMLRNYFLSD 175

Query: 231 RHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDA 290
            HN   C+    ++ C+ C+LD +FS ++ G  +P+ PA  L + W+ +  LA Y QQDA
Sbjct: 176 MHNSKACK----IKECMCCELDKLFSEVYSGKTVPFGPATLLATTWKASPELAGYSQQDA 231

Query: 291 HEFFISMLDGIHEKVEKDQHKPRSQGNGDC---CIAHRVFSGILRSDVMCMACGFTSTTF 347
           HEFFIS L+ +H+          + GN      C+ H VF G L+SD  C  CG TS+  
Sbjct: 232 HEFFISALNHLHKS---------AYGNTSISCNCVVHAVFGGQLQSDHTCGKCGSTSSKI 282

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
           DP +D S+ L+ N                  E D           TL  CL RFT PE +
Sbjct: 283 DPILDISMQLKGN----------------GVEED-----------TLAECLRRFTHPETM 315

Query: 408 GSDQKFFCQQC--QVRQESLKQMSIRKLPLVSCFHIKRFEHSSV--RKMSRKVDRYLQFP 463
               K+ C +C  Q  Q++ K++SIRKLP V     KRFEH     +   +K+D +++ P
Sbjct: 316 ---TKYSCNRCGPQFHQQATKRLSIRKLPPVLSIQFKRFEHEGQNGKATPKKIDTHVRIP 372

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS--EFELFAVVTHTGKLDAGHYV 521
            +L+M PY +  I             G +      P    E++LFAVV H G++D GHY 
Sbjct: 373 ATLNMLPYTTIGIKN----------QGGQKERFLGPGVLYEYDLFAVVNHDGQIDTGHYT 422

Query: 522 TYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
            Y R  + W++ DD  +   + + V  +  YM FYV++ L YK
Sbjct: 423 NYARSQDLWFRFDDDKVAHSSLSDVLKSTVYMCFYVKRHLDYK 465


>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
          Length = 482

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 178/553 (32%), Positives = 281/553 (50%), Gaps = 88/553 (15%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCP-RLYACM 81
           C H+A F +    +P   +   L I P        R++  + +C +C       RL+AC+
Sbjct: 6   CEHVAAFKSLYRLQPLHILHRKL-ICPHS--EFFSREAISLLKCMLCRSRRGKHRLHACL 62

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 141
            C  + C    H     +H  +   A  H +++D+      C +CRD VYD DF+   + 
Sbjct: 63  HCVFIGCFEKKH-----LH--RHQKATGHNLSIDLTFGNTHCASCRDYVYDDDFEKVRLA 115

Query: 142 ---AHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGL 198
               H   I Q             +   W P+  + + +  +A  +    + +G    GL
Sbjct: 116 CRNGHRNGIHQ-------------NLPVWEPEKIDLNFLGQHAKRL----TVDGRSTLGL 158

Query: 199 RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAI 258
           RGL N GNTCFMN V+QAL H+P LR+YFL ++H R    S + +  C+ C+   +F   
Sbjct: 159 RGLVNQGNTCFMNVVIQALTHSPVLRDYFLMEKHPRC---SPSEISSCIVCEFSQIFQEF 215

Query: 259 FCGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
           F  +   P +P + L   WR++  LA YEQQDAHEF I++LD IHE+++     PR +G 
Sbjct: 216 FSNENSNPMTPYRLLLLVWRNSEYLAGYEQQDAHEFLIAVLDMIHERLQ-----PRIEGG 270

Query: 317 ------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
                 + +  I  +VF+G ++S+V+C  CG  S T DP  D SLD+ P   S+      
Sbjct: 271 SIDLTGHAERSIIDQVFTGYMQSNVVCNQCGNISQTIDPLRDISLDI-PQVPSA------ 323

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
                                 +LM CL +FT+ E+LG+  K  C++C  RQES KQ++I
Sbjct: 324 ----------------------SLMDCLSKFTKKEQLGNASKINCKKCGKRQESSKQLTI 361

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
            +LP+V+C H+KRFE ++    S KV   + FP +LDM P++SS+           P   
Sbjct: 362 SRLPVVACLHLKRFEQTATGSRS-KVATPVSFPKTLDMGPFMSSA-----RNTSLSPEFC 415

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ 550
           D ++       ++ELFAVV H G L +GHY +++R ++ W++CDD+ IT+ +   V  ++
Sbjct: 416 DSAHY------KYELFAVVNHMGNLQSGHYTSFIRQTSSWFRCDDSLITKASIEQVLNSE 469

Query: 551 GYMMFYVQKMLYY 563
            Y++FY +K + +
Sbjct: 470 AYLLFYHKKSIRF 482


>gi|170581551|ref|XP_001895729.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
           malayi]
 gi|158597214|gb|EDP35423.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
           malayi]
          Length = 498

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 189/543 (34%), Positives = 273/543 (50%), Gaps = 64/543 (11%)

Query: 22  PCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           PC H+   + R  +K   ++   + I P   +A  R   +   RC  C       + AC 
Sbjct: 4   PCKHIG-INQRALSKTLNSVVYAV-IFPNNAKA--REVHARYIRCIQCKTRLNALMCACC 59

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 141
            C+  +C      +H+  H     +A  H  AV V+   ++C  C D VYDR  + A   
Sbjct: 60  QCSTFAC-----LTHIHDHM----AAKEHLFAVSVETGFIYCYQCGDFVYDRGMEDA--- 107

Query: 142 AHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPID-------SMSSSNGDL 194
                       EN  +R        S +L  RS+    A+ +D        M   +   
Sbjct: 108 --------RRDAENGCRR--------SLNLSTRSIWYPGAAVVDVCHDDPTRMVRFSRSS 151

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
            RGLRGL NLGNTCFMN ++QA+ HTP L++YFL+D+H+     S +  + CL C+L   
Sbjct: 152 IRGLRGLVNLGNTCFMNCIIQAIVHTPHLKDYFLTDQHHCASSSSHSKAQ-CLMCELANT 210

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           F   + GD  PY P +FL   W HA +LA YEQQDAHEFFI+ LD +H           S
Sbjct: 211 FQEFYKGDVTPYKPNRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHR--HSGSSSLPS 268

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
             N   CI   +F+G L+SD+ C  CG  STT DP  D SLD+      S  +SS     
Sbjct: 269 TPNECNCIIDWIFTGKLQSDLTCSICGCVSTTVDPFWDISLDVAQEVLRSPSSSSGSPQQ 328

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             TL  CL R+  PE LGS+ K  C +C+  +ES KQ++++ LP
Sbjct: 329 I-----------------TLEDCLHRYIMPEHLGSNAKTKCARCETYEESTKQLTLKTLP 371

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           +V+CFH+KRFEHS   K  +K+D  +++P  +DM P+ +S   R R            ++
Sbjct: 372 MVACFHLKRFEHS--HKDRKKMDTKIKYPQFIDMTPFTAS--FRERSSGAPESRTSIVTD 427

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYM 553
            L    +++ELFAVV H G +++GHY  Y+R   N+W++CDD  +T+V    V ++QGY+
Sbjct: 428 LLTTNRNKYELFAVVNHLGTMESGHYTCYIRHQRNQWFQCDDQKVTKVPTERVLSSQGYL 487

Query: 554 MFY 556
           +FY
Sbjct: 488 LFY 490


>gi|195999732|ref|XP_002109734.1| hypothetical protein TRIADDRAFT_52906 [Trichoplax adhaerens]
 gi|190587858|gb|EDV27900.1| hypothetical protein TRIADDRAFT_52906 [Trichoplax adhaerens]
          Length = 488

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 184/547 (33%), Positives = 268/547 (48%), Gaps = 67/547 (12%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEV-PRCGVCGDSSCPRLYACM 81
           C H+A        +  R I     I  P  +     D   +  +C +C      RLYAC+
Sbjct: 4   CAHVATLKNNQLLEQIRFISS--QIITPTSQLPPNNDLKVILSQCHICKKYQ-KRLYACV 60

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 141
            C  V C+   H  H A           H++A+D  R  LFC  C   +YD D +     
Sbjct: 61  QCVFVGCYDHSHIQHHA-------KVAKHQLAIDTLRGTLFCTECGKHIYDPDVENI--- 110

Query: 142 AHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMV-NNASPIDSMSSSNGDLPRGLRG 200
            H   +   S   +L++  + +Y  W P  +E  L+  NN     S+ S       GL+G
Sbjct: 111 -HCQRMQLPSCKGHLKQVYKYNY--WRPSAKEVQLLSRNNTRYKLSLKS-----KIGLKG 162

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLGNTCFMNS++QAL HTP LR+YFLSD+H    C   N    C+AC+L ++F   + 
Sbjct: 163 LANLGNTCFMNSIVQALVHTPILRDYFLSDKHQ---CSHDNN-NTCIACELASIFQKFYS 218

Query: 261 GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ-GNGD 319
              +P+ P K LY  W +A ++A Y QQDAHEF I++L+ +H   +++     ++  + +
Sbjct: 219 VGSLPHIPNKLLYLIWTNARHMAGYVQQDAHEFLIAILNALHGHFKRELSSSFNEIIDNN 278

Query: 320 C-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           C CI H++F+G ++SDV C  CG TSTT DP  D S+D+   +      SS  + +    
Sbjct: 279 CRCIVHQIFAGNMQSDVTCQKCGNTSTTIDPFFDISMDIGSLENERCDLSSASTVYE--- 335

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
              G NSS      TL+ CLDRFT  E L                        KL    C
Sbjct: 336 --TGANSS-----VTLLNCLDRFTHAETLDH---------------------AKLKCHRC 367

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
               RFEHS  +K  RK+  Y+ F   LDM PY+S    + R  N       +++     
Sbjct: 368 HEYSRFEHS--KKFGRKITTYVAFSDILDMKPYVS----KLRINNGESGHADNQNAKSCS 421

Query: 499 PSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            S  + LFAV+ H+G LD+GHY  Y+R   N+W++CDDA I +     V +++GY++FY 
Sbjct: 422 SSVRYCLFAVINHSGTLDSGHYTCYVRQPYNQWFECDDAKIRKATTKDVLSSEGYLLFYH 481

Query: 558 QKMLYYK 564
           ++ L Y+
Sbjct: 482 RETLDYE 488


>gi|449540309|gb|EMD31302.1| hypothetical protein CERSUDRAFT_119860 [Ceriporiopsis subvermispora
           B]
          Length = 550

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 179/552 (32%), Positives = 277/552 (50%), Gaps = 64/552 (11%)

Query: 23  CPHLADFHARNGTKP-----FRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           CPHLA   +   TK      +R +      +      + +R     P C  C  ++  + 
Sbjct: 12  CPHLAVIFSDENTKTILLDTYRKVATWRVQRSQIAANSAKRRKISFPACRTCS-TTMLKP 70

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           + C+ C+ ++C    H  H+  H  ++     H + +DV    ++C  C D VYD +   
Sbjct: 71  FVCIRCSYLACW---HDEHIKDHLDESG----HVLCLDVSSGNVYCRDCGDFVYDSNAHR 123

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
             + A   +  +S+  +  R   R  +R W+   +E  + +  ASP+           + 
Sbjct: 124 TNIAAFVAAEERSTFFQEARTGSREPFRTWTAAEKE-VVALEAASPVPC---------QA 173

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
            RGL NLG TCFMN +LQ+    P LRNYFLSD+HN   C++ +    C  C+LD +FS 
Sbjct: 174 RRGLLNLGQTCFMNVILQSFLANPLLRNYFLSDKHNHKLCKAAD----CTCCELDIVFSE 229

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
           ++  +  PY PA FL + WR ++ L+ Y QQDAHEFFIS L+ IH          R    
Sbjct: 230 VYSRNPGPYGPASFLATTWR-STELSGYSQQDAHEFFISTLNQIHST-------SRGSTA 281

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             C CI H  F+G+L+S V C  CG  +T  DP +D SL+L+   GS++ T  T      
Sbjct: 282 FQCICIIHSTFAGMLQSQVKCERCGNVTTATDPMLDISLELKDKGGSAVGTEMT------ 335

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKLPL 435
                            L+ CL R+T+PE+LG +Q + C +C +   E+ K++SI KLP 
Sbjct: 336 -----------------LLSCLRRYTQPEKLGPNQ-YSCDKCGKASHEASKRLSILKLPP 377

Query: 436 VSCFHIKRFEHSSVRK-MSRKVDRYLQFPLSLDMAPYLSSSIL-RSRFGNRFFPFDGDES 493
           V  F  KRFEH S  K  + K++  ++FP +++MAP+ +  +  + R  +     D    
Sbjct: 378 VLSFQFKRFEHKSGDKSAAHKIEAPVRFPATINMAPFTTLFMKSKERQSDEHGSTDAASF 437

Query: 494 NTLN-EPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
           + L  E + E++LF VV H G++D GHY  + R  ++WY+ DD  +T  +      +Q Y
Sbjct: 438 SHLGPETNYEYDLFCVVCHEGQMDNGHYTCFARSHDEWYRYDDDKVTHTSLGECLNSQAY 497

Query: 553 MMFYVQKMLYYK 564
           M FYV++ L YK
Sbjct: 498 MCFYVKRRLEYK 509


>gi|302850031|ref|XP_002956544.1| hypothetical protein VOLCADRAFT_67026 [Volvox carteri f.
           nagariensis]
 gi|300258242|gb|EFJ42481.1| hypothetical protein VOLCADRAFT_67026 [Volvox carteri f.
           nagariensis]
          Length = 351

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/351 (41%), Positives = 197/351 (56%), Gaps = 19/351 (5%)

Query: 215 QALFHTPPLRNYFLSDRHNRYYC--QSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFL 272
           Q   H+P +RNYFL   H++  C    K+    CL+C+LD +F+A + GDR P SP  FL
Sbjct: 6   QVFIHSPLMRNYFLGQGHSQSACLRHGKSPGVPCLSCELDAVFAAAYSGDRAPLSPTDFL 65

Query: 273 YSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILR 332
           YSWW  A +LA Y QQDAHEF++S L G+   V+ +      +G G   +   VF G+LR
Sbjct: 66  YSWWTFADSLAGYRQQDAHEFYLSALSGL-AGVQPNTGVGSCRGRGLVPLVDAVFGGVLR 124

Query: 333 SDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS 392
           SDV C  CG TST +DP +D SLD+    G+        +N S    A G       G +
Sbjct: 125 SDVTCSVCGHTSTAYDPFLDISLDMVQGHGAGFGA----ANPSVPRCAQGA-----VGHA 175

Query: 393 TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKM 452
           TL GCL  F  PERL + + + C  C+ +Q ++KQ+SIR+LP V   H+KR E       
Sbjct: 176 TLQGCLRHFVTPERLSAGEAWVCSACKQQQPAVKQLSIRRLPPVLALHVKREEELWPPFR 235

Query: 453 SRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD---GDESNTLNEPSSEFELFAVV 509
              V   L FPLSLD+APY + +ILR R G + FP +   GD     +  S  + LFAV+
Sbjct: 236 PCPVQTKLHFPLSLDLAPYTTPAILRERCGFQRFPCEPALGDLGGLNDTVSCRYRLFAVI 295

Query: 510 THTGKLDAGHYVTYLR----LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           +H G L  GHYV ++R        WY+CDDAW+T V+   V A Q YM+FY
Sbjct: 296 SHKGDLSGGHYVVFVRPGGAAGGSWYQCDDAWVTAVSVEDVTACQAYMLFY 346


>gi|332860745|ref|XP_003317508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Pan
           troglodytes]
          Length = 651

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/463 (37%), Positives = 238/463 (51%), Gaps = 37/463 (7%)

Query: 18  IFPQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           + P  C H+  F    N  +  R I  C       G    R+  ++   C VCG +   R
Sbjct: 153 VGPPGCSHVNSFKVGENWRQELRVIYQCFVW---CGTPETRKSKAKSCICHVCG-THLNR 208

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L++C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +
Sbjct: 209 LHSCLSCVFFGCFT---EKHIHEHAETKQ----HNLAVDLYYGGIYCFMCKDYVYDKDIE 261

Query: 137 AAVVLAHTTSI-IQSSKPENLRKRR------RIDYRPWSPDLRERSLMVNNASPIDSMSS 189
                    ++ +Q+S    +  ++         +  W     E  L+ +N       SS
Sbjct: 262 QIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPRRRRITSS 321

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLAC 249
                  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+  +   LCL C
Sbjct: 322 ----FTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR---CEMPSP-ELCLVC 373

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           ++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H   + D 
Sbjct: 374 EMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDD 433

Query: 310 HKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
               +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   +S    
Sbjct: 434 VGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSCTSFWPM 492

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
           S     S N E      S   GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ+
Sbjct: 493 SPGRESSVNGE------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQL 546

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPY 471
           ++ KLP+V+CFH KRFEHS   K  RK+  Y+ F + LDM P+
Sbjct: 547 TMNKLPVVACFHFKRFEHS--EKQRRKITTYISFQMELDMTPF 587


>gi|302684821|ref|XP_003032091.1| hypothetical protein SCHCODRAFT_76495 [Schizophyllum commune H4-8]
 gi|300105784|gb|EFI97188.1| hypothetical protein SCHCODRAFT_76495 [Schizophyllum commune H4-8]
          Length = 621

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 180/515 (34%), Positives = 255/515 (49%), Gaps = 80/515 (15%)

Query: 55  AIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAV 114
           A RR  S  P C  C      R   C+ C+   C      SH  I A    S   H+  V
Sbjct: 44  AKRRKLSNRPICDTC-RVPLARPITCLQCSYSGCW-----SHGHIRAHLKGSG--HQFGV 95

Query: 115 DVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRER 174
           D     L+C AC D VY+   +A    ++  ++        L         PW P  R+ 
Sbjct: 96  DPSTGSLYCLACNDFVYNSRAEALYADSYANAVASY-----LHYSDHGPAIPWIPTERDY 150

Query: 175 SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           +  +N AS +         +  G RGL NLG TCFMN VLQ+  H P LRNYFL D H+R
Sbjct: 151 N-AINAASAV---------VCEGRRGLLNLGQTCFMNVVLQSFVHNPLLRNYFLGDMHDR 200

Query: 235 YYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             C   +    C +C++D++FS I+  +  PY P  FL + WR ++ LA Y QQDAHEFF
Sbjct: 201 RICTIAD----CTSCEMDSLFSEIYSDESSPYGPIGFLVTTWRGSAELAGYAQQDAHEFF 256

Query: 295 ISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
           IS L+ IH         P +  +  C CI HR F+G L+S+V C  CG  + T DP  D 
Sbjct: 257 ISTLNQIHAS------SPDASPSNKCPCIVHRTFAGQLQSEVRCGRCGNVTLTVDPMFDV 310

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SL+L                             +  G +TL  CL RFT PE+L + +++
Sbjct: 311 SLEL-----------------------------RGVGENTLFDCLRRFTHPEKLWT-KEY 340

Query: 414 FCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS-RKVDRYLQFPLSLDMAPY 471
            C++C +  QE+ K+MSIR+LP V  F  KRFE +   K + RK++  ++FP +LDM+PY
Sbjct: 341 SCERCGKNGQEASKRMSIRRLPPVLSFQFKRFEQNMADKGTVRKIEASVRFPATLDMSPY 400

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSE--FELFAVVTHTGKLDAGHYVTYLRLSNK 529
            ++  +R   G             L +P     ++LFAV+ H G+++ GHY  + R   +
Sbjct: 401 -TTRAMRQHAG-----------EGLPDPPGTYVYDLFAVINHEGQMNNGHYTNFARYGRE 448

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           WY+ DD  +T  +  TV A+  YM FYV++ L YK
Sbjct: 449 WYRFDDDKVTNTSLATVLASAAYMCFYVKRRLDYK 483


>gi|391340120|ref|XP_003744393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
           [Metaseiulus occidentalis]
          Length = 465

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 168/494 (34%), Positives = 237/494 (47%), Gaps = 96/494 (19%)

Query: 76  RLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF 135
           RL+AC+ C  V C +  HS        +     +H +A+ +    L+C  C + V+D +F
Sbjct: 59  RLHACLQCCYVGCRLYNHSQ-------EHHEESNHHVAISLSHGVLYCYLCAEYVHDYEF 111

Query: 136 DAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
           D   + A               ++R  D+                               
Sbjct: 112 DIIAIKA---------------RQRLADFL------------------------------ 126

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLGNTCFMN ++Q L HTP LR YFLS +H       ++    CL C++ ++F
Sbjct: 127 -GLRGLYNLGNTCFMNCIIQCLTHTPFLREYFLSQQHKCI----RSSPADCLVCEMCSIF 181

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G   P+ P + LY  W HA +LA YEQQDAHEFF++ L+ +H+        P S 
Sbjct: 182 QEFYSGKIFPHVPTRLLYLVWTHAQHLAGYEQQDAHEFFMATLNLVHKHASGTD-IPYSG 240

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL-EPNQGSSMKTSSTKSNH 374
           G    CI   +F+G L+SDV+C +C   STT +P  D SLDL +   G S K  S     
Sbjct: 241 GCN--CIIDVIFTGSLQSDVVCQSCHGVSTTIEPFWDISLDLGQQTAGDSRKPRSLDRK- 297

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                              L  CL+ FTR E LGS  K  C +C   QES KQ++ +KLP
Sbjct: 298 ------------------KLTDCLENFTRAEHLGSAAKIKCSKCNSYQESTKQLTFKKLP 339

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           LV  FH+KRFEHS +  + +KV   + FP  LD++PY++    +          + D ++
Sbjct: 340 LVVSFHLKRFEHSKL--LHKKVSTPIAFPQQLDLSPYMAKPEEQE---------EADPTS 388

Query: 495 TLNEPS----SEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAA 549
           T ++PS      + LF VV H G L  GHY  Y+R S N W+KCDD  I       V   
Sbjct: 389 TSHDPSFSRPHTYSLFGVVIHQGTLQTGHYTAYIRQSPNGWFKCDDCEIKTATIEEVLNC 448

Query: 550 QGYMMFYVQKMLYY 563
           + Y++FY +K + Y
Sbjct: 449 EAYLLFYHKKYIEY 462


>gi|409048865|gb|EKM58343.1| hypothetical protein PHACADRAFT_140190 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 550

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 181/558 (32%), Positives = 271/558 (48%), Gaps = 75/558 (13%)

Query: 21  QPCPHLADFHARNGT----KPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPR 76
           Q C HLAD           K ++ +      +        +R     P C  C   +  R
Sbjct: 10  QGCSHLADLDGEEEKEIMLKRYKTVISWHMCRRHEAVHPAKRRKLSSPSCERC-QITLSR 68

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
            + C+ C   +C      SH+  H  +      H    D     ++C  C D VYD  F 
Sbjct: 69  PFVCLQCFHTACW---RESHIHDHFREVG----HSFCADSKSGAIYCLDCDDFVYDPTFT 121

Query: 137 AAVVLAHTTSIIQSSK--PENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
           + +    +TS+  S +    NL K R+  Y+PW PD ++ + +    +           L
Sbjct: 122 SVL---SSTSVTASERLMSGNLAKSRKEPYKPWIPDSKDNAALEGAVA-----------L 167

Query: 195 P-RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           P +G RGL NLG TCF+N++LQ+    P LRN+FLSD+HN   C +K+    C +C++D 
Sbjct: 168 PCQGRRGLLNLGQTCFLNAILQSFLANPLLRNFFLSDKHNEKLCSTKD----CTSCEMDR 223

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHA-SNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
           +F+ ++ G   P  P  FL + W+ + + L+ Y QQDAHEFFIS L+ IH          
Sbjct: 224 LFTEVYSGKGGPLGPISFLATTWKASPTELSGYAQQDAHEFFISALNQIHAT-------S 276

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           + +    C CI H  F G+L+SDV C  CG  ++T DP  D SL++E             
Sbjct: 277 KGKTAASCICIVHTTFDGLLQSDVRCERCGNVTSTTDPMFDISLEIE------------- 323

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC----QVRQESLKQ 427
                   A G   +Q+    TL  CL ++T PE+L  +  + C +C     VR    K+
Sbjct: 324 --------AKGSAIAQDI---TLASCLRQYTLPEKLALND-YTCGKCSKASHVRAS--KR 369

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRK-MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           +SIRKLP V  F  KRFEH +  K  +RK++  ++FP SL+MA + + ++  S  G++  
Sbjct: 370 LSIRKLPPVLSFQFKRFEHPTADKSTARKIESPVRFPASLNMAEFTTHAMKSSAPGSKA- 428

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
               D SN   +   E++LF+VV H G +D GHY  Y R  ++WY+ DD  +T       
Sbjct: 429 KSTPDISNPGPDSLYEYDLFSVVCHEGSIDNGHYTCYTRHQDEWYRYDDDKVTHSTLGAC 488

Query: 547 RAAQGYMMFYVQKMLYYK 564
             +Q YM FYV++ L YK
Sbjct: 489 LNSQVYMCFYVKRHLDYK 506


>gi|449663022|ref|XP_002159615.2| PREDICTED: uncharacterized protein LOC100197916 [Hydra
           magnipapillata]
          Length = 1176

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/411 (37%), Positives = 223/411 (54%), Gaps = 42/411 (10%)

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L+AC+ C    C+      H+  H  K +    H +A+D++   ++C +C+  VYD++FD
Sbjct: 471 LHACLHCVYFGCY--SGCRHIIEHLEKKN----HILAIDLNYGNIYCNSCKTYVYDKEFD 524

Query: 137 AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLM-VNNASPIDSMSSSNGDLP 195
           A        +I +S +   ++   +  Y  W P+  E+ L+ +N    I +  S      
Sbjct: 525 AV-------AIEESDRAWQIKYSGKRKYVEWEPNGIEQELLRINKKRKILTYGSY----- 572

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            GLRGL NLG+TCFMN +LQA  HTP LRNYFLSD H    C  ++ +  CL C++  +F
Sbjct: 573 IGLRGLINLGSTCFMNCILQAFTHTPMLRNYFLSDCH---CCPPEDSLN-CLVCEMSDLF 628

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              + G +  + P + LY  W +A +LA YEQQDAHEFFIS LD +H     D   P + 
Sbjct: 629 QEFYSGKKAAHIPFRLLYKVWTNARHLAGYEQQDAHEFFISTLDVLHRHFRDDSSTPSNN 688

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL---EPNQGSSMK------ 366
            N   C+  ++F+G L+S++ C+AC   STT DP  D SLDL    P   S  +      
Sbjct: 689 HNNCNCVIDQIFTGGLQSELTCLACRGVSTTVDPFWDISLDLGDYNPALKSGRRTPNILF 748

Query: 367 --TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
             T +   + S  C  D     Q     +L  CL RFTR E+LGS+ K  C  C   QES
Sbjct: 749 DTTDAKIESFSSRCSEDEKFVPQ-----SLTECLRRFTRKEKLGSEAKIRCSHCLSYQES 803

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
            KQ+S++KLP+V CFH KRFEH +    S+K+  ++ FP  LDM P++SSS
Sbjct: 804 TKQLSMKKLPIVVCFHFKRFEHFT---KSKKISTHIPFPEELDMTPFMSSS 851



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)

Query: 503  FELFAVVTHTGKLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            + LFAVV H G L+ GHY  ++R    +W+KCDD WIT+ + + V  ++GY++FY +++L
Sbjct: 1114 YSLFAVVNHQGTLEVGHYTNFIRQKKGEWFKCDDGWITKSSLSEVLNSEGYLLFYHKEIL 1173

Query: 562  YYK 564
             Y+
Sbjct: 1174 DYE 1176


>gi|353236807|emb|CCA68794.1| related to UBP8-Ubiquitin-specific protease component of the SAGA
           complex [Piriformospora indica DSM 11827]
          Length = 587

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 168/523 (32%), Positives = 260/523 (49%), Gaps = 83/523 (15%)

Query: 56  IRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVD 115
           ++R   + P C  C      R   C+ C  + C       HV  H  ++     H +AVD
Sbjct: 78  LKRQKMQPPVCSSC-KIPLRRPAVCLQCRFIGCWT---REHVQSHMRESG----HTLAVD 129

Query: 116 VDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQ-SSKPENLRKRRRIDYRPWSPDLRER 174
           +    ++C AC        F+ A +   + ++   ++K E+ RK +R+ Y+ W P++ E+
Sbjct: 130 LITGSIYCAACNA------FEPAPLSLESKALPTFANKEEDSRKHKRLTYKSWQPNVIEK 183

Query: 175 SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           +          ++SS+N       RG  NLG TC+M+ +LQA  H P LRN+FLSD+HN 
Sbjct: 184 T----------ALSSANTIPCEVRRGFLNLGATCYMSVILQAFLHNPLLRNFFLSDKHNS 233

Query: 235 YYCQSKNGVRLCLACDLDTMFSAIF---------CGDRMPYSPAKFLYSWWRHASNLASY 285
             C    G   C+ C+LD MF+ +F          G  +   P   L + W++++++A Y
Sbjct: 234 KLC----GKLYCMCCELDQMFADVFNPSSTQNVDSGAGLSVGPLSLLRTTWQNSNDMAGY 289

Query: 286 EQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTST 345
            Q DAHEFFI++L+ +H       H     G+   C+ H++F+G L+SDV C  CG  + 
Sbjct: 290 AQHDAHEFFITVLNQLHSGSADATH-----GSSCTCVVHQIFAGQLQSDVKCGKCGHINP 344

Query: 346 TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPE 405
           T DP +D SL+L+                             N  + TL  CL RFT  E
Sbjct: 345 TIDPMLDISLELK--------------------------GVPNGKMPTLASCLRRFTEKE 378

Query: 406 RLGSDQKFFCQQCQV-RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
            L ++  + C  C     E+ KQ+SIRKLP V C  +KRFEH S    + K+D  ++FP 
Sbjct: 379 TLPAN-AYVCSNCNSSTSEATKQLSIRKLPPVLCIQLKRFEHKS---SAAKIDTPVKFPG 434

Query: 465 SLDMAPYLSSSI-LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTY 523
            ++M+PY +++I ++ R G    P   D + T      ++ELFAVV H G+L+ GHY  +
Sbjct: 435 IINMSPYTTAAIGMQVREGK--VP-KLDPATTY-----DYELFAVVNHEGQLNTGHYTNF 486

Query: 524 LRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
            R  N+WY+ DD  +T         +  YM FYV++ L Y A+
Sbjct: 487 ARSQNEWYRFDDEKVTHTTLRECLQSIPYMCFYVKRNLDYGAA 529


>gi|296419785|ref|XP_002839472.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635633|emb|CAZ83663.1| unnamed protein product [Tuber melanosporum]
          Length = 524

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 155/489 (31%), Positives = 249/489 (50%), Gaps = 56/489 (11%)

Query: 76  RLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF 135
           R + CM C ++ C   P  +             +H   +D     ++C  C+D +YD   
Sbjct: 88  RTFLCMQCPSIYC---PKDAEAHYKEK------NHRFGIDSRSGHVYCFPCQDFIYDPAL 138

Query: 136 DAAVVLAHTTSIIQSSKPENLRKRRRID-YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
           +   V        + +     RKRRR+D  +P   DL+           I+S ++     
Sbjct: 139 EKIRVEK------EVAMEGGARKRRRLDDIKPSPEDLKY----------IESNTTLAPCR 182

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRG  N+G+TCFM+ VLQ+L H P +RN++L+D H    C   N    C++C ++ +
Sbjct: 183 ATGLRGFLNMGSTCFMSVVLQSLIHNPLVRNFYLADGHKPKECAQAN----CMSCAMEEV 238

Query: 255 FSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
           FS  F  D+   + P   L + W+    LA Y+QQDAHE+   +L+ +H     +     
Sbjct: 239 FSEFFATDKTDGFGPVNLLTTSWKCEQTLAGYQQQDAHEYLQFLLNQLHATNGGNTDTKT 298

Query: 314 SQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
            Q     CI HR F G L+SDV C  C   +T  DP +D SLDL       + T  T   
Sbjct: 299 EQCK---CIIHRAFYGNLQSDVTCEGCQNVTTAVDPVMDLSLDLRKKDKRKLATPKT--- 352

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE-SLKQMSIRK 432
                E DG        + TL  CL+RFT  E+LG ++ + C+ C   QE + KQ+++++
Sbjct: 353 -----EGDG-------AMQTLQECLERFTSTEKLGMNE-YNCENCSGHQEVATKQLTVKR 399

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           LP V C  +KRFEH S +  S K+D  ++FP+ LDMAPY + +  +++ G+      G +
Sbjct: 400 LPPVLCIQLKRFEHGSTK--SSKIDTKIRFPMQLDMAPYTTRAKRKAKDGSTDC---GPK 454

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
           S+        ++L +VV HTG++++GHY+ + R + +W++ DD+ +T   E  V +A+ Y
Sbjct: 455 SSLKGHGPYLYDLLSVVVHTGQINSGHYINFSRENGQWFRFDDSVVTLATEKDVLSAKAY 514

Query: 553 MMFYVQKML 561
           ++FY+ + L
Sbjct: 515 LLFYIIRSL 523


>gi|303281438|ref|XP_003060011.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458666|gb|EEH55963.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 585

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 182/582 (31%), Positives = 265/582 (45%), Gaps = 82/582 (14%)

Query: 23  CPHLADFHARNGTKPFRAIQDC-LHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           C HL  F A  GT+ F  +  C L  K PG     R D++                 AC+
Sbjct: 30  CSHLKTFLAHGGTRVFAPLARCCLAAKFPGQMPKTRMDAT----------------MACL 73

Query: 82  ACAAV--SCHVPPH-SSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
            CA +      P H  S     A  T++  +H +  DV+RAELFC AC   VY  +FD  
Sbjct: 74  GCAKLCTRAQAPAHMKSQPPPPAGSTNTVNAHCVYADVERAELFCAACSTYVYALEFDKT 133

Query: 139 V--VLAHTTSI-------------------IQSSKPENLRKRRRIDYRPWSPDLRERSLM 177
           V  V A  T +                   I   +  + +KR++   R     L +  + 
Sbjct: 134 VNGVAAVATGVGATTGGAEKRAAGDGDGDAIAGEEGGSNKKRKKTTPRT---QLAKMDVH 190

Query: 178 VNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC 237
               +P+ S+++    +PRGLRG  NLGNTCF+++V+QA+   P +  +FL D HNR+ C
Sbjct: 191 AAGGAPLASVNAHG--VPRGLRGFANLGNTCFLSTVMQAVVRAPNVGGFFLRDGHNRHAC 248

Query: 238 QSKNGVRL----------CLACDLDTMFSAIFCGDRMPYSPAKFLYS---WWRHASNLAS 284
             +   R           CLAC+LD +    + G   P  P+ FL+S       A   A 
Sbjct: 249 GRERAERWTAAASAEDEHCLACELDGLVGEAYSGSGEPIVPSAFLHSCEGAAAKAETGAG 308

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTS 344
                + E   +      E    +   P ++     C+ HR F+G LRSDV C  CG TS
Sbjct: 309 AGAGGSGEISAAPPKSPDENGGANPQAPPARSEYCECVLHRAFAGSLRSDVTCKRCGHTS 368

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
           T  DP V  SLD+    G+  +                   S      TL GCL +F RP
Sbjct: 369 TVNDPTVGLSLDVPVPLGADGRRGGKGR----------GGGSGGGPGITLEGCLRQFARP 418

Query: 405 ERLGSDQKFF-CQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKM-------SRK 455
           E L  D   F C +C       +KQM+IR+LP     H+KRFEH   +K          K
Sbjct: 419 ETLSIDGDVFPCARCGDTATPKMKQMAIRRLPPTLALHLKRFEHGGAKKQNAHGDGGGSK 478

Query: 456 VDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK- 514
           ++ ++ FP  L M  Y +S+ +R R+GNR  P    +    ++P + ++LFAVV H+G+ 
Sbjct: 479 IESHVSFPFVLPMRAYCASTAIRERYGNRLTPM--SDGGGADDPKN-YDLFAVVVHSGQG 535

Query: 515 LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            D+GHY+ Y++    W++CDD  +T  +  TV  AQ Y++FY
Sbjct: 536 SDSGHYIAYVQWQGAWFRCDDHQVTRADPITVATAQAYLLFY 577


>gi|388578750|gb|EIM19089.1| cysteine proteinase [Wallemia sebi CBS 633.66]
          Length = 498

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 163/473 (34%), Positives = 243/473 (51%), Gaps = 53/473 (11%)

Query: 104 TSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID 163
           T SA +H  ++DV    +FC  C+D +Y+   +  + L H     +++K +      R  
Sbjct: 68  THSAENHNFSMDVLSGHVFCSGCKDYIYNPRLEKLIKLLHLRQEERATKRKTTNGSIRSS 127

Query: 164 YRPWS--PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTP 221
           +RP +  P ++  + + +N   +          PRG R   NLG TCF+N VLQA    P
Sbjct: 128 FRPLNDVPKVKLTNGVFSNPIALR---------PRGFR---NLGKTCFLNVVLQAFIANP 175

Query: 222 PLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRH--A 279
            LR+YFLS++HN   C SK G   C+AC+ D +F  +   D  P  P   L++ W    A
Sbjct: 176 LLRSYFLSEKHNHILC-SKEG---CMACEFDKLFMQVHQPDLTPLGPISLLHTLWTAPGA 231

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMA 339
           S+LA Y QQDAHE +IS+L+ IH      ++    + +   CI H+ F G L+S++ C  
Sbjct: 232 SDLAGYAQQDAHEAYISLLNLIHAGCTTSENIHSDECS---CIIHQTFQGTLQSELKCGK 288

Query: 340 CGFTSTTFDPCVDFSLDL----EPNQGSSMKTSSTKSNHSCN-CEADGMNSS-QNCGIST 393
           C + S T DP +D SLD+        G S + S T S ++ N    +G  SS       T
Sbjct: 289 CNYASVTSDPFLDVSLDVGTPSSSTNGVSKRGSQTMSKNTSNGAPKNGKGSSVPTVESQT 348

Query: 394 LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
           L  CL R+T PE   SD K  C  C   + S KQ+S +KLP V  F IKR+EH      +
Sbjct: 349 LDNCLKRYTHPEH--SDWK--CTSCSANEASTKQLSFKKLPTVLAFQIKRYEHG---LWA 401

Query: 454 RKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
           +K+D  ++FPL LDM PY++               D DE + +      ++LF V+ H G
Sbjct: 402 QKLDAPVRFPLVLDMRPYVALG-------------DDDEPDEM----YLYDLFCVINHLG 444

Query: 514 KLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
           ++D GHY    R   +W++C+DA +      +V  +QGYM+ Y+++ L Y AS
Sbjct: 445 EMDTGHYTCASRFGEQWFRCEDADVVPTTIKSVLDSQGYMLLYIKRTLVYYAS 497


>gi|322784613|gb|EFZ11492.1| hypothetical protein SINV_03513 [Solenopsis invicta]
          Length = 438

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/453 (35%), Positives = 228/453 (50%), Gaps = 50/453 (11%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C HL +F A  G +P++ I     +      A +R+  S +  C  C      RL++C+ 
Sbjct: 6   CIHLNNFKAAKGIQPYKVIHSYF-VTSTSTEARVRKAVSCL--CHTCKTYK-DRLHSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C+V     H+  HA KT     H +AVD+    + C  C D VYDR+        
Sbjct: 62  CIFFGCYV---KGHIQEHA-KTKK---HFLAVDLCYGNILCFQCGDYVYDRELLTVAKAQ 114

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
            + S    S  E         YR W P   E  L+     P       N  +  GLRGL 
Sbjct: 115 WSESAKSLSFGEF--------YRAWEPTQIETELL--RKHPRRRRVVENSTI--GLRGLI 162

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           NLGNTCF+N ++QAL HTP LR+YFL+DRH   +C   +    CL C++  +F   + G+
Sbjct: 163 NLGNTCFVNCIVQALIHTPLLRDYFLADRH---HCPQPSR---CLVCEVSHLFQEFYSGN 216

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           + P +  K L+  W H  +LA YEQQDAHEFFI+ LD +H   E      +   +   CI
Sbjct: 217 KAPLTLHKLLHLIWTHVKHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKENPHNCKCI 276

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
             ++F+G L+SDV+C AC   STT DP  D SLDL     +S   +              
Sbjct: 277 IDQIFTGCLQSDVVCQACNGVSTTIDPFWDISLDLTSAASASGSDAPGTP---------- 326

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                    ++L+ CL++FTR E LGS  K  C  C+  QES KQ+++++LP+V+ FH+K
Sbjct: 327 ---------TSLLDCLEKFTRAEHLGSGAKIKCSNCETYQESTKQLTMKQLPIVAIFHLK 377

Query: 443 RFEHSSV--RKMSRKVDRYLQFPLSLDMAPYLS 473
           RFEH  +  +   +K+  ++ FP  LDM P++S
Sbjct: 378 RFEHFIIQDKIFKKKISTFISFPEQLDMTPFMS 410


>gi|402224715|gb|EJU04777.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
          Length = 558

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 248/508 (48%), Gaps = 65/508 (12%)

Query: 63  VPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELF 122
            P CG C  +   R   C+ C+ +         HV  H  KT     H   +D     +F
Sbjct: 53  APMCGGCA-APLHRPQLCLECSFLGGW---DDGHVKAHLEKTG----HLFGIDAKSGMIF 104

Query: 123 CCACRDQVYDRDFDA---AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVN 179
           C +C D +Y ++ D     V+LA    + +   P  + +   I+        R++    N
Sbjct: 105 CHSCDDFIYSKEMDERFEQVLLA----VEEKRTPTQVSQENSIE--------RQKFTSWN 152

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
                  ++       RG RGL NLG +C+++ ++Q   H P LRNYFLSD+H    C++
Sbjct: 153 EGQHRVQLAGFKSVAGRGRRGLLNLGASCYLSVIVQTFLHNPVLRNYFLSDKHPTRLCKN 212

Query: 240 KNGVRLCLACDLDTMFSAIFCGDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
               + C+ C++D +F+  +  +   PY P   +++ W   + LA Y QQDAHEF+++ L
Sbjct: 213 N---KTCICCEMDKLFAEFYSTNTATPYGPTSLMHAMWLTTTELAGYAQQDAHEFYLAAL 269

Query: 299 DGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
             IH          R   N  C CI H  F+G L+S+V+C  CG  +TT DP +D SLDL
Sbjct: 270 HQIHAS-------SRGSTNVSCNCIIHSTFAGQLQSEVVCGECGNVTTTLDPMLDISLDL 322

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
           +   GS       K+ H      +          +TL  CL RFTR E+L    ++ C +
Sbjct: 323 KGVAGS-------KNKHQLGVADE----------NTLGACLRRFTRHEKL--PHEYNCSE 363

Query: 418 C-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI 476
           C ++   + K++S RKLP V  FH KRFEHSS    + K+D  ++FP  ++MAP+ S+++
Sbjct: 364 CGKMTNGATKRLSFRKLPPVLAFHFKRFEHSST---ATKIDTPIRFPSVINMAPFTSAAL 420

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDA 536
                G      D DE     E   +++LFAVV H GK+D GHY  + R+  +WY+ DD 
Sbjct: 421 -----GKPEGTIDPDEFGP--EVLYDYDLFAVVNHEGKIDTGHYTNFARVDGEWYRYDDD 473

Query: 537 WITEVNENTVRAAQGYMMFYVQKMLYYK 564
            +          ++ YM FY+++   Y+
Sbjct: 474 KVVRTTLRACLDSRAYMCFYIKRHFEYR 501


>gi|336383888|gb|EGO25037.1| hypothetical protein SERLADRAFT_415884 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 537

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 159/480 (33%), Positives = 241/480 (50%), Gaps = 68/480 (14%)

Query: 93  HSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSK 152
           H +H A     ++ AC     VD     +FC  C D +YD   D   +   +T I    K
Sbjct: 74  HVTHPAKRRKISAPAC-----VDAKSGAVFCAECDDIIYDTTLDNVFL---STVISVEEK 125

Query: 153 PENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGNTCFMN 211
             N + R    Y  W+P   + + +                LP +G RGL NLG TCF+N
Sbjct: 126 HTNFQGREA--YVAWTPTEEDNAALRGTVI-----------LPCQGRRGLLNLGQTCFLN 172

Query: 212 SVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKF 271
            +LQ+  H P LRNYFLSDRHN   C+  +    C+ C++D +F+ I+     P+ P  F
Sbjct: 173 VILQSFIHNPLLRNYFLSDRHNSKLCKHAH----CICCEMDKLFTEIYSPTSTPFGPTSF 228

Query: 272 LYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGI 330
           L + W+ +S ++ Y QQDAHEFFI+ L  IH          R   N  C CI H  F+G 
Sbjct: 229 LATTWKVSSEMSGYAQQDAHEFFITALALIHGTC-------RGSTNVSCNCIIHSTFAGA 281

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
           L+SDV C  CG  ++T DP +D SL+L+       KTS    N    C    + S +N G
Sbjct: 282 LQSDVTCERCGNITSTVDPMLDISLELKS------KTSEAGDNTLAGC----LRSQKNLG 331

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
           +  ++           +     +         E+ K++S+RKLP V  F  KRFEH ++ 
Sbjct: 332 LKNIVAA--------NVARLHTYGVTLFHDPLEANKRLSVRKLPPVLSFQFKRFEHKNMS 383

Query: 451 KMS--RKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE--PSS--EFE 504
           K S  +K+D  ++FP+ L+MAPY ++ ++ ++         G ES   ++  P +  E++
Sbjct: 384 KFSSPQKIDTPIRFPVMLNMAPY-TTLVMNAK---------GKESEKGHDLGPDAMYEYD 433

Query: 505 LFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           LFAV+ H G++D GHY  + R  ++WY+ DD  +T+ +     ++  YM FYV++ L YK
Sbjct: 434 LFAVINHEGQMDNGHYTNFARFQDEWYRFDDDKVTQSSLGACLSSPAYMCFYVKRHLDYK 493


>gi|113675400|ref|NP_001038713.1| ubiquitin carboxyl-terminal hydrolase 22 [Danio rerio]
 gi|94573470|gb|AAI16509.1| Ubiquitin specific peptidase 22 [Danio rerio]
          Length = 417

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 158/429 (36%), Positives = 223/429 (51%), Gaps = 45/429 (10%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGFKVDNWKQNLRVIYQCF---VWSGSAETRKRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C       H+  HA        H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLHCVFFGCFS---KKHIHEHAKNKR----HNLAIDLLHGGIYCFVCQDYIYDKDME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     ++N  +
Sbjct: 109 ---------QIAKEEQ-RKAWKLQGIGEKYSMWEPTKRELELLRHN--PKRRKITANCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKA 269

Query: 315 QGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
                C CI  ++F+G L+SDV C  C   STT DP  D SLDL P   +     S  S+
Sbjct: 270 NNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL-PGSSTPFWPLSPGSD 328

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
            S     +G   S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ+++++L
Sbjct: 329 GSV---VNG--DSHPSGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRL 383

Query: 434 PLVSCFHIK 442
           P+V+CFH+K
Sbjct: 384 PIVACFHLK 392


>gi|430810894|emb|CCJ31572.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 483

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 250/496 (50%), Gaps = 68/496 (13%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           +C VC D    R   C+ C+ + C    HS    IHA KT +   H  A+D+    L+C 
Sbjct: 50  KCFVCHDIL-KRSLLCLQCSHIGCWRRKHSE---IHA-KTQN---HIFAIDIFSGYLYCF 101

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
           +C D +YD  F+   +L      ++SS   N++    +  +     +     + N+    
Sbjct: 102 SCHDFIYDPIFEKIYILVKRKLNMKSS---NIKNSICLSNKGLEISIENHDYLDND---- 154

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D  +   GD   GLRG+ N+G TCFMN V+Q L H P  RNYFLSD H    C   N   
Sbjct: 155 DVQAICCGD---GLRGIQNMGATCFMNVVIQCLVHNPIFRNYFLSDGHVIKNCLQDN--- 208

Query: 245 LCLACDLDTMFSAIFCGD--RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
            C  C +DT+ +  F      +P+ P+ FL   W+ +  L  Y +QDAHEFF+ ++  IH
Sbjct: 209 -CSCCAMDTVIAEFFSKKDFSIPFGPSSFLEIMWKLSKELKGYVEQDAHEFFVCLMSQIH 267

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
                  H          CIAH+ FSGIL+SDV C +CG  ++T DP +D SL+L+    
Sbjct: 268 ------NHSGSKIDTTCTCIAHKTFSGILQSDVTCSSCGNVTSTMDPIMDVSLELKIK-- 319

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVR 421
           S +   S+ S H                + +L  CL RFT PE L S+ ++ C +C  V 
Sbjct: 320 SIVDVESSSSGHL---------------VKSLQECLQRFTSPENL-SNNEYKCSKCLSVS 363

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRF 481
           ++++KQ+  +++PLV CF +KRFEHSS      K+D ++ F   LDM PY++    RS +
Sbjct: 364 EKAMKQLKFKRIPLVICFQLKRFEHSST---PTKIDTHVNFSFQLDMFPYIA----RSNY 416

Query: 482 GNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEV 541
            + +            +    ++L +V+ H G+++ GHY ++ R ++ W++ DD  I   
Sbjct: 417 MDCY------------KDDCIYDLLSVICHQGQINTGHYTSFARSNDNWFQFDDTTIFIT 464

Query: 542 NENTVRAAQGYMMFYV 557
           NE TV ++  Y+  ++
Sbjct: 465 NEKTVLSSNAYVCNFI 480


>gi|393233831|gb|EJD41399.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
          Length = 544

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 172/572 (30%), Positives = 262/572 (45%), Gaps = 96/572 (16%)

Query: 19  FPQP-----CPHLA--------------DFHARNGTKPFRAIQDCLHIKPPGGRAAIRRD 59
            P+P     CPHLA               + AR   +P     +     PP  R  I+  
Sbjct: 1   MPEPTLDTRCPHLAASIDAILPRFKSAVSWAARVAARPTNGPGE-----PPAKRRRIQH- 54

Query: 60  SSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRA 119
               P C  C   SC   + C+ C A +C      SH   H         H  AV+    
Sbjct: 55  ----PSCAKCS-LSCASPWVCLQCHASACW-----SHAGPHILAHLRESGHAFAVEAKTG 104

Query: 120 ELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVN 179
            ++C  C   V  +  +A   L    +  + ++     K+ R  Y PW+PD ++      
Sbjct: 105 SIWCSRCDTIVVSKKLEAEHSLLVLRAEEKRTRFHVDGKKTREAYVPWTPDPKD------ 158

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
                +++        RG RGL NLGNTC++N +LQ   + P LRNY+L+DRHN   C  
Sbjct: 159 ----AEALRGVTNVPCRGRRGLLNLGNTCYLNCILQTFLNNPLLRNYYLADRHNSKACDR 214

Query: 240 KNGVRLCLACDLDTMFSAIFCGDRM--PYSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
                 C++C+LD +F+ ++ G +   P  P   L+S W  + +++ Y Q DAHE  I++
Sbjct: 215 AA----CVSCELDKLFAEVYSGAQFAQPLGPTTMLHSTWLLSKDVSGYAQHDAHECLITL 270

Query: 298 LDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLD 356
           L+ +H          R   +  C C+ H +F+G L+S+V C  C   S T DP +D SL 
Sbjct: 271 LNALHAHT-------RGSTSTSCNCVVHTIFAGQLQSEVRCARCSSHSRTLDPMLDLSLS 323

Query: 357 LEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQ 416
           L                       DG    Q     TL GCL R+TR ERL +     C 
Sbjct: 324 L---------------------ARDGTPPGQAL---TLEGCLKRYTRTERLDARD---CP 356

Query: 417 QCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS--RKVDRYLQFPLSLDMAPYLSS 474
            C+   E+ K++SIR+LP V C  +KRFEH    K +  +K+D +++FP +++M PY+S 
Sbjct: 357 DCRHTAEATKRLSIRRLPPVLCVQLKRFEHKGADKGAAPQKIDAHVRFPAAINMLPYVS- 415

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCD 534
                + G +  P  G   +T      +++LFAVV H G++D GHY  + R  ++WY+ D
Sbjct: 416 ----PKTGAKGAPGSG-AVDTGPPSMYDYDLFAVVCHEGQIDNGHYTCFARSQDEWYRYD 470

Query: 535 DAWITEVNENTVRAAQG--YMMFYVQKMLYYK 564
           D  +T        +  G  YM+ YV++ L Y+
Sbjct: 471 DDKVTHATLRDALSPHGHAYMLCYVKRRLEYR 502


>gi|326506010|dbj|BAJ91244.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 284

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 146/276 (52%), Positives = 173/276 (62%), Gaps = 35/276 (12%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSS--CPRL 77
           P PC HLA    R  ++P R ++ CL ++P  GR  IRRD+ EVPRC  C  SS   PRL
Sbjct: 7   PPPCAHLAAH--RLTSRPLRFLRRCLRVRP-LGRPEIRRDAREVPRCSPCPASSQPPPRL 63

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           YAC+ CA V C         A     ++ A  H+IAVDVDRAELFC AC DQVYD DFD 
Sbjct: 64  YACLTCATVFC------PSHAASHAASAPAPGHQIAVDVDRAELFCAACGDQVYDPDFDH 117

Query: 138 AVVLAHTTSI----------IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSM 187
           AVVLA +T++            S+ P   RKRRR+DYR W+PD  E +L V +A P  S 
Sbjct: 118 AVVLAQSTALHPPSASASPPSASASPAAPRKRRRVDYRAWAPDPAEVAL-VRSADPTTSA 176

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR--- 244
           S++    P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNR+ C  +  +R   
Sbjct: 177 SAAE---PAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPMRHRT 233

Query: 245 -------LCLACDLDTMFSAIFCGDRMPYSPAKFLY 273
                   CLACDLD ++SA F G+R PYSPAKFLY
Sbjct: 234 TDAEAKAACLACDLDEIYSATFSGERTPYSPAKFLY 269


>gi|452837883|gb|EME39824.1| hypothetical protein DOTSEDRAFT_47375 [Dothistroma septosporum
           NZE10]
          Length = 513

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 159/504 (31%), Positives = 247/504 (49%), Gaps = 75/504 (14%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C  VS             AT+   +  H  +V+     ++C  C D +YD  F+ 
Sbjct: 57  YLCLQCPRVS-------------ATRERHSKGHGFSVESMNGFIYCHECEDFIYDPTFEE 103

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                     I+ +K    +KR++ D    S    +R LMV+N +     ++       G
Sbjct: 104 ----------IRDTKS---KKRKQSDSLSES----DRKLMVSNTTATPCSAT-------G 139

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRG  N+G TCFM+ +LQ+L H P +R ++L + H    C+       C +C LD +F+ 
Sbjct: 140 LRGFYNMGQTCFMSVILQSLIHNPLIRAWYLCEGHKSSECERD----CCTSCSLDDIFTD 195

Query: 258 IFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE------KVEKDQH 310
            F  ++   Y     L + W+   +LA Y QQDAHEF   +LD +HE      + E    
Sbjct: 196 FFGSEKHEGYGAVHMLQACWKGGGSLAGYSQQDAHEFLGFILDSLHEANTDSEEKEAGDE 255

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
            P+   N DC I H+ F G++RS V C  C  T+T  +P +D SLD++     + K    
Sbjct: 256 TPKKTENCDC-IIHQTFGGVMRSTVTCSDCKNTNTASEPFMDLSLDIKSTGFVTKKKKLA 314

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
            +N         + + +      L  CLDRFT  E L S+  + C++C   +E++K++++
Sbjct: 315 LTN--------AVQTIKEAIPMDLRECLDRFTSTETLTSED-YTCRKCNAPKEAMKKLTL 365

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN------- 483
            +LP V   H+KRF HS  +  S KV+  ++FP SL+MAP+LS     ++  N       
Sbjct: 366 TQLPPVLPIHLKRFAHSKTKAESNKVNTTIRFPFSLNMAPWLSKEAKAAKAANGHQAERN 425

Query: 484 ---------RFFPFDGDESNTLNEPSSE-FELFAVVTHTGKLDAGHYVTYLRLSNKWYKC 533
                       P  G E    +EP    FEL +VV H GK+D GHY++Y R  N+W++ 
Sbjct: 426 NDSDDGDTIDVKPKSGKEKKEDDEPQKPVFELSSVVVHKGKIDNGHYISYSRQGNEWFRF 485

Query: 534 DDAWITEVNENTVRAAQGYMMFYV 557
           DD  + +V+E  V +A+ YM+FYV
Sbjct: 486 DDEKVVQVDEREVLSAEAYMLFYV 509


>gi|432110167|gb|ELK33944.1| Ubiquitin carboxyl-terminal hydrolase 27 [Myotis davidii]
          Length = 324

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 187/320 (58%), Gaps = 19/320 (5%)

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
            LCL C++ ++F  ++ G+  P+ P K L+  W HA +LA Y QQDAHEF I+ LD +H 
Sbjct: 5   ELCLVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHR 64

Query: 304 KVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             + D     +     C CI  ++F+G L+SDV C AC   STT DPC D SLDL P   
Sbjct: 65  HCKGDDVGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDL-PGSC 123

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
           +S    S     S N E      S   G +TL  CL RFTRPE LGS  K  C  CQ  Q
Sbjct: 124 TSFWPMSPGRESSVNGE------SHIPGTTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQ 177

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           ES KQ+ + KLP+V+CFH KRFEHS+  K  RK+  Y+ FPL LDM P+++SS      G
Sbjct: 178 ESTKQLMMNKLPVVACFHFKRFEHSA--KQRRKITTYISFPLELDMTPFMASSKESRMNG 235

Query: 483 NRFFPF-DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITE 540
               P   G++ N       ++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+
Sbjct: 236 QLQLPTSSGNDEN-------KYSLFAVVNHQGTLESGHYTSFIRHHKDQWFKCDDAVITK 288

Query: 541 VNENTVRAAQGYMMFYVQKM 560
            +   V  ++GY++FY +++
Sbjct: 289 ASIKDVLDSEGYLLFYHKQV 308


>gi|414585138|tpg|DAA35709.1| TPA: hypothetical protein ZEAMMB73_275507 [Zea mays]
          Length = 280

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/274 (52%), Positives = 173/274 (63%), Gaps = 33/274 (12%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSS---CPR 76
           P PCPHLA    R  ++P R ++ CL ++P  GR  IRRD  E+PRC  C  +S     R
Sbjct: 7   PPPCPHLAAH--RLSSRPLRFLRRCLRVRP-LGRPEIRRDPRELPRCSPCSAASPSPTSR 63

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           LYAC++CAAV C         A      S+   H+IAVDVDRAELFC AC DQVYD DFD
Sbjct: 64  LYACLSCAAVFC------PSHAATHASASAGPGHQIAVDVDRAELFCAACGDQVYDPDFD 117

Query: 137 AAVVLAHTTSIIQSSKPEN--------LRKRRRIDYRPWSPDLRERSLMVNNASPIDSMS 188
            AV LA ++S++ S+   +        LRKRRR+DYR W+PD  E +LM +     D  +
Sbjct: 118 HAVFLAQSSSLLPSTSTSSASASASPALRKRRRVDYRAWAPDPAEFALMTS----ADPTT 173

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR---- 244
           S++   P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNR+ C  +  VR    
Sbjct: 174 SASASAPAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRAS 233

Query: 245 -----LCLACDLDTMFSAIFCGDRMPYSPAKFLY 273
                 CLACDLD ++SA F GDR PYSPAKFLY
Sbjct: 234 DADRVACLACDLDEIYSAAFSGDRTPYSPAKFLY 267


>gi|58269036|ref|XP_571674.1| ubiquitin specific protease [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134112790|ref|XP_774938.1| hypothetical protein CNBF1030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257586|gb|EAL20291.1| hypothetical protein CNBF1030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227909|gb|AAW44367.1| ubiquitin specific protease, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 599

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 179/555 (32%), Positives = 268/555 (48%), Gaps = 90/555 (16%)

Query: 55  AIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCH--VPPHSSH---VAIHATKTSSACS 109
            ++R  +  P C  C  +   R +AC+ C  V C   V   ++    +  H   +   C+
Sbjct: 71  GVKRRKTMSPGCHTC-KTPLSRPWACLTCPYVGCMPLVGKGANEKDCMKRHWKSSGRKCA 129

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK--------RRR 161
              AVD     +FC AC D  Y   F++   L  TT I      ++ R+        R R
Sbjct: 130 --FAVDPSTGTIFCEACGDTTYPDTFES---LFLTTRIRVEESNDHSREPGLVGGKGRGR 184

Query: 162 IDYRPWSPD----LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL 217
            +++ W+P+    L ER ++  +               RGLR L NL  TCF+++VLQAL
Sbjct: 185 GEWKSWNPNNIAALNEREVVRTSC--------------RGLRPLLNLSQTCFLSAVLQAL 230

Query: 218 FHTPPLRNYFLSDRHNRYYCQS--------------KNGV--------RLCLACDLDTMF 255
            H P L+ YFLSD+HNR+ C +              +NG         R C+ C++D  F
Sbjct: 231 VHNPLLKAYFLSDKHNRHVCTNGGKGLLVGKPFLGVENGPGAVGSDRERGCMCCEMDKAF 290

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              +  D+ P+ P   LY+ W  ++ L  Y QQDAH FF++ LD IH          + Q
Sbjct: 291 EEFYNEDKSPFGPITMLYAMWHASTELEGYGQQDAHSFFLAALDQIHAHA-------KGQ 343

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS--- 372
            +   CIAH+ F+G L+S V+C  C  TS T DP +D  LD  P    S  +SS+ S   
Sbjct: 344 LSSCNCIAHQTFAGSLQSSVICSKCSKTSNTVDPILDIQLDFPPPSVPSSASSSSDSSAF 403

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG--SDQKFFCQQCQVRQE--SLKQM 428
             S N +AD +         TL G L +F  PER+G      + C  C       +++++
Sbjct: 404 GPSTNGQADQL---------TLAGMLRKFCAPERVGDPGGNGYECSGCGGGVGVVAMRKL 454

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            ++KL  V  F +KRF HSS    S K++ +++FP +LDM PY+ SS       +R    
Sbjct: 455 GVKKLAPVLSFQLKRFAHSSA-TTSVKIESHVRFPSTLDMRPYVDSSSSSKSGNDR---- 509

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
              +   L +    ++LFAVVTH GKLD GHY   +R   +W+ CDD  +T  + + V A
Sbjct: 510 ---KEKELPDSLYIYDLFAVVTHEGKLDNGHYWADVRDGEEWWHCDDDKVTPTSLSAVLA 566

Query: 549 AQGYMMFYVQKMLYY 563
            + YM+FYV++ + Y
Sbjct: 567 QRAYMLFYVKRSIAY 581


>gi|26350927|dbj|BAC39100.1| unnamed protein product [Mus musculus]
          Length = 302

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 185/316 (58%), Gaps = 16/316 (5%)

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
           + ++F   + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H   + D +
Sbjct: 1   MSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDN 60

Query: 311 KPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
             ++     C CI  ++F+G L+SDV C  C   STT DP  D SLDL  +       S 
Sbjct: 61  GKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSP 120

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                  N E      S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++
Sbjct: 121 GSEGSVVNGE------SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLT 174

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           ++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D
Sbjct: 175 MKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLD 232

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRA 548
                +LN   +++ LFAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  
Sbjct: 233 -----SLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLD 286

Query: 549 AQGYMMFYVQKMLYYK 564
           ++GY++FY ++ L Y+
Sbjct: 287 SEGYLLFYHKQFLEYE 302


>gi|355727947|gb|AES09363.1| ubiquitin specific peptidase 22 [Mustela putorius furo]
          Length = 325

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/350 (40%), Positives = 194/350 (55%), Gaps = 29/350 (8%)

Query: 114 VDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI--DYRPWSPDL 171
           +++    ++C  C D +YD+D +          II   +     K + +   +  W P  
Sbjct: 1   IELMYGGIYCFLCHDYIYDKDME----------IIAKEEQRRAWKLQGVGEKFSTWEPTK 50

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR 231
           RE  L+ +N  P     +SN  +  GLRGL NLGNTCFMN ++QAL HTP LR++FLSDR
Sbjct: 51  RELELLKHN--PKRRKITSNCTI--GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDR 106

Query: 232 HNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAH 291
           H R   QS +    CL C++ ++F   + G R P+ P K L+  W HA +LA YEQQDAH
Sbjct: 107 H-RCEMQSPSS---CLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAH 162

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           EF I+ LD +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT DP 
Sbjct: 163 EFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPF 222

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
            D SLDL  +       S        N E      S   G +TL  CL RFTRPE LGS 
Sbjct: 223 WDISLDLPGSSTPFWPLSPGSEGSVVNGE------SHVAGTTTLTDCLRRFTRPEHLGSS 276

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
            K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+
Sbjct: 277 AKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYV 324


>gi|449303952|gb|EMC99959.1| hypothetical protein BAUCODRAFT_63002 [Baudoinia compniacensis UAMH
           10762]
          Length = 560

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 244/529 (46%), Gaps = 79/529 (14%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           + G   D+     Y C+ C ++      H                H  +V+     ++C 
Sbjct: 77  KSGAGTDTIVGVTYLCLQCPSIGVGRERHRK-------------DHAFSVESSNGSIYCH 123

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
            CRD VYD  F+           I++S     +KR+   +        +R  +  N + I
Sbjct: 124 ECRDFVYDPTFEE----------IRTSNNAISKKRKHSTF----ASSEDRKFVSTNTATI 169

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
              ++       GLRGL N+G TCFM+ +LQ+L H P +R+YFLS+ H    C+ +    
Sbjct: 170 PCAAT-------GLRGLYNMGQTCFMSVILQSLVHNPLIRSYFLSEGHKSSDCERE---- 218

Query: 245 LCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
            C +C LD +F+  +  ++   Y     L   W+    LA Y QQDAHEF    ++ +H 
Sbjct: 219 ACTSCALDDIFTDFYGQEKHEGYGAVHMLQGCWKGGGGLAGYSQQDAHEFLNFFINSLHT 278

Query: 304 KVE--------------KDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFD 348
            +               + + K   +   DC CI H  FSG+L S V C AC   +T  D
Sbjct: 279 AITETDEAEDEENNNKTEAKQKAAEKDAKDCSCIIHTAFSGLLTSTVTCTACRNVTTALD 338

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P +D SLD+     S  K   T  N        G  + +      L  CLDRFT  E L 
Sbjct: 339 PFLDLSLDIRSAAVSVKKKKLTMIN--------GTTTVREVLPMDLTECLDRFTSAETLS 390

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
           +D  + C++C   QE+ K++S+ +LP V   H+KRF HS     S K++  +++PL+ D 
Sbjct: 391 ADS-YHCRKCDKNQEATKKLSLGRLPPVVAVHLKRFSHSKSLSQSTKIETKIRYPLTADF 449

Query: 469 APYLSSSILRSRFGNRFFP---------------FDGDESNTLNEPSSEFELFAVVTHTG 513
            PYL++ +  +   N+  P                D  +S+        +EL +VV H G
Sbjct: 450 TPYLTTPVPSNSGKNKPKPQQQATGHAPDDEASAADTVDSSAYTPSDPIYELSSVVVHKG 509

Query: 514 KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           K+D GHYV+Y R + ++WY+ DD+ + +V+E    +A+ YM+FYV + L
Sbjct: 510 KIDNGHYVSYSRQAEHEWYRFDDSMVVQVDEKEALSAEAYMLFYVARGL 558


>gi|321259864|ref|XP_003194652.1| ubiquitin specific protease [Cryptococcus gattii WM276]
 gi|317461124|gb|ADV22865.1| ubiquitin specific protease, putative [Cryptococcus gattii WM276]
          Length = 598

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 176/554 (31%), Positives = 264/554 (47%), Gaps = 89/554 (16%)

Query: 55  AIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSH-----VAIHATKTSSACS 109
            ++R  +  P C  C  +   R +AC+ C+ + C             +  H   +   C+
Sbjct: 71  GVKRRKTMSPGCHTC-KTPLSRPWACLTCSYIGCMTLVGKGANEKDCMKRHWKSSGRKCA 129

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK--------RRR 161
              A+D     +FC AC D  Y   F++   L  TT I      ++ R+        R R
Sbjct: 130 --FAIDPFTGTIFCDACGDTTYPDTFES---LYLTTRIRVEESNDHSREPGVVSGKGRGR 184

Query: 162 IDYRPWSPD---LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALF 218
            +++ W+P    L ER +   +               RGLR L NL  TCF++++LQAL 
Sbjct: 185 GEWKSWNPGNCALSEREVAKTSC--------------RGLRPLLNLSQTCFLSAILQALV 230

Query: 219 HTPPLRNYFLSDRHNRYYCQS--------------KNGV--------RLCLACDLDTMFS 256
           H P L+ YFLSDRHNRY C +              +NG         R C+ C++D  F 
Sbjct: 231 HNPLLKAYFLSDRHNRYVCTNGGKGLLVGKPFLGVENGPGAVGSDRERGCMCCEMDKAFE 290

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
             +  D+ P+ P   LY+ W  ++ L  Y QQDAH FF++ LD IH          + Q 
Sbjct: 291 EFYNEDKSPFGPITMLYAMWHASTELEGYGQQDAHSFFLAALDQIHAHA-------KGQL 343

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS---N 373
           +   CIAH+ F+G L+S V+C  C  TS T DP +D  LD  P    S  +SS+ S    
Sbjct: 344 SSCNCIAHQTFAGTLQSSVICSKCSKTSNTVDPILDIQLDFPPPSAPSSASSSSDSSAFG 403

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG--SDQKFFCQQCQVRQE--SLKQMS 429
            S N +AD +         TL G L +F  PER+G    + + C  C       + +++ 
Sbjct: 404 PSTNGQADQL---------TLAGMLRKFCAPERVGEPGGKGYECSGCGGGVGVVATRKLG 454

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           ++KL  V  F +KRF HSS    S K++ +++FP +LDM PY+ SS       ++     
Sbjct: 455 VKKLAPVLSFQLKRFAHSSA-TTSVKIESHVRFPSTLDMRPYVDSSSSSKSGKDK----- 508

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAA 549
             +   L +    ++LFAVVTH GKLD GHY   +R   +W+ CDD  +T  + + V A 
Sbjct: 509 --KGKGLPDSLYIYDLFAVVTHEGKLDNGHYWADVRDGEEWWHCDDDKVTPTSLSAVLAQ 566

Query: 550 QGYMMFYVQKMLYY 563
           + YM+FYV++ + Y
Sbjct: 567 RAYMLFYVKRSIAY 580


>gi|405121153|gb|AFR95922.1| ubiquitin specific protease [Cryptococcus neoformans var. grubii
           H99]
          Length = 577

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 172/529 (32%), Positives = 261/529 (49%), Gaps = 64/529 (12%)

Query: 55  AIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAV 114
            ++R  +  P C  C  +   R +AC+ C  + C +P       ++   +    +  IAV
Sbjct: 71  GVKRRKTTSPGCYTC-KTPLSRPWACLTCPYIGC-MPLLGK--GVNEKDSYPEDNIMIAV 126

Query: 115 DVDRAELFCCACRDQVYDRDFDAAVVLAHT---TSIIQSSKPENL--RKRRRIDYRPWSP 169
           D     +FC AC D  Y   F++  ++       S   S +P  +  + R R +++ W+P
Sbjct: 127 DPSTGTIFCEACGDTTYPDTFESLYLITRIRVEESNDHSREPGLVGGKGRGRGEWKSWNP 186

Query: 170 D----LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRN 225
           +    L ER ++  +               RGLR L NL  TCF+++VLQAL H P L+ 
Sbjct: 187 NNIAALNEREVVRTSC--------------RGLRPLLNLSQTCFLSAVLQALVHNPLLKA 232

Query: 226 YFLSDRHNRYYCQSKNGVRLCLA----CDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASN 281
           YFLSD+HNR+ C   NG +  L       ++    A +  D+ P+ P   LY+ W  ++ 
Sbjct: 233 YFLSDKHNRHVCT--NGGKGLLVGKPFLGVENRPGAFYNEDKSPFGPITMLYAMWHASTE 290

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACG 341
           L  Y QQDAH FF++ LD IH          + Q +   CIAH+ F+G L+S V C  C 
Sbjct: 291 LEGYGQQDAHSFFLAALDQIHAHA-------KGQLSSCNCIAHQTFAGSLQSSVTCSKCS 343

Query: 342 FTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS---NHSCNCEADGMNSSQNCGISTLMGCL 398
            TS T DP +D  LD  P    S  +SS+ S     S N +AD +         TL G L
Sbjct: 344 KTSNTVDPILDIQLDFPPPSVPSSASSSSDSSAFGPSTNGQADQL---------TLAGML 394

Query: 399 DRFTRPERLG--SDQKFFCQQCQVRQE--SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
            +F  PER+G    + + C  C       +++++ ++KL  V  F +KRF HSS    S 
Sbjct: 395 RKFCAPERVGDPGGKGYECSGCGGGVGVVAMRKLGVKKLAPVLSFQLKRFAHSSA-TTSV 453

Query: 455 KVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
           K++ +++FP +LDM PY+ SS       +R       +   L +    ++LFAVVTH GK
Sbjct: 454 KIESHVRFPSTLDMRPYVESSSSSKSGTDR-------KEKELPDSLYIYDLFAVVTHEGK 506

Query: 515 LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYY 563
           LD GHY   +R    W+ CDD  +T  + + V A + YM+FYV++ + Y
Sbjct: 507 LDNGHYWADVRDGEGWWHCDDDKVTPTSLSAVLAQRAYMLFYVKRSIAY 555


>gi|392573770|gb|EIW66908.1| hypothetical protein TREMEDRAFT_34431, partial [Tremella
           mesenterica DSM 1558]
          Length = 585

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 254/564 (45%), Gaps = 93/564 (16%)

Query: 35  TKPFRAIQDCLHIKPPGGRAA-IRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPH 93
           +K    +Q   HI   G  +  ++R     P+C  C  S   R +AC+ C+ V C     
Sbjct: 1   SKSKEVVQRYRHIVRRGATSQRMKRRQMTSPQCTAC-SSPLSRPWACLTCSFVGCMGAYS 59

Query: 94  SSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRD----FDAAVVLAHTTSII- 148
            S         + +     AVD     + C  C D  Y       +D  ++     + + 
Sbjct: 60  LSPRQCFEDHFAESDDCLFAVDSVTGAVLCSICDDTHYLESLSAIYDETLLRLEEDNDLS 119

Query: 149 -QSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGN 206
            Q++   + + R+R  Y PW                ++S  S +  +P RGLR L NL  
Sbjct: 120 QQTAGLPSGKGRKRAHYHPW----------------VESSQSDSTRMPCRGLRPLLNLSQ 163

Query: 207 TCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV---------------------RL 245
           TCF++++LQAL H P L+ YF+SD+HNR+ C    G+                     R 
Sbjct: 164 TCFLSAILQALIHNPLLKAYFMSDKHNRWVCPDSRGLGMGRPYLGAEVESGSVGQDRERG 223

Query: 246 CLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
           C+ C+LD  F      D+ PY P   LY+ W  ++ L  Y QQDAH FF++ LD IH   
Sbjct: 224 CMCCELDRAFEEFHADDKSPYGPVTMLYAMWHASAELEGYGQQDAHSFFLAALDQIHAHA 283

Query: 306 EKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
                  R Q     CIAH+ F+G L S V C +C  TSTT DP +D  LD  P      
Sbjct: 284 -------RGQSTSCTCIAHQTFAGSLLSSVTCSSCHTTSTTVDPILDIQLDFPP------ 330

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG--SDQKFFCQQCQVRQ- 422
                             +S  N    TL G L RF   E++G    + + C  C     
Sbjct: 331 ------------------SSLTNPEPLTLPGMLRRFCAEEKVGDHGGKGYDCSSCGGGSG 372

Query: 423 -ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYL--SSSILRS 479
             + +++ I++LP V  F +KRF H +    S KV+  ++FP +++MAPY+   SSI  S
Sbjct: 373 VAATRKLLIKRLPPVLAFQLKRFGHHN--STSTKVEVPVRFPSTINMAPYVEHGSSIPSS 430

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWIT 539
           +        D  +   L +    ++LFAVVTH GKLD GHY   +   ++W+ CDD  +T
Sbjct: 431 Q--------DAQKEQRLPDSVYLYDLFAVVTHEGKLDNGHYWADVLSGDEWWHCDDDKVT 482

Query: 540 EVNENTVRAAQGYMMFYVQKMLYY 563
               + V+  + Y++FY ++ L Y
Sbjct: 483 PTTLSAVQGQKAYLLFYAKRTLAY 506


>gi|398389743|ref|XP_003848332.1| hypothetical protein MYCGRDRAFT_50123 [Zymoseptoria tritici IPO323]
 gi|339468207|gb|EGP83308.1| hypothetical protein MYCGRDRAFT_50123 [Zymoseptoria tritici IPO323]
          Length = 479

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/540 (30%), Positives = 243/540 (45%), Gaps = 94/540 (17%)

Query: 22  PCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL-YAC 80
           P  H+ +  A  G K        +      G    R         G  G S+C  + Y C
Sbjct: 26  PAAHIKNLLAAAGDKAIDGYTKLITTLQKEGNVTDRITK------GPSGISTCGHVTYLC 79

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C  VS             A+K      H  AV+     + C  C+D VYD  F+    
Sbjct: 80  LQCPTVS-------------ASKEKHRPGHNFAVESSNGFVLCYDCKDFVYDPTFEEI-- 124

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                      +  N +KR+   Y     D  +R LM NNA      ++       GLRG
Sbjct: 125 -----------RAPNTKKRK---YSTSVAD-GDRKLMANNAVVTPCAAT-------GLRG 162

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L N+G TCFM+ +LQ+L H P +R ++L++ H    C+ +     C +C LD MF   + 
Sbjct: 163 LYNMGQTCFMSVILQSLIHNPFIRTFYLAEGHRSTDCERE----ACTSCALDDMFIDFYA 218

Query: 261 GDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE-KVEKDQHKPRSQGNG 318
            ++   Y     L   W+    LA Y QQDAHE+   +L+ +HE  +++D  +P  Q   
Sbjct: 219 QEKHEGYGAVHMLQGCWKGGGGLAGYSQQDAHEYLGFILNSLHEANIDEDDERPAEQKEK 278

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
           DC C+ H+ F G+LRS V C  C   +T+ DP +D SLD++ N G S+K           
Sbjct: 279 DCECVIHQTFGGLLRSTVTCATCNNVTTSLDPFMDLSLDVK-NAGFSIKKKKLAM----- 332

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
              +G  + +      L  CL+RFT  E L +D  +FC++C+  +E+ K+++I +LP V 
Sbjct: 333 --INGTQTVKEALPMDLTECLERFTSVESLSTDS-YFCRKCEASREAKKKLTIARLPPVV 389

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
             H+KRF HS     S K        L  D  P                           
Sbjct: 390 PIHLKRFSHSQKSSQSNKN------KLKGDAEP--------------------------Q 417

Query: 498 EPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           EP   +EL +V+ H GK+D GHY++Y R   +W++ DD+ + +V+E  V  A+ YM+FYV
Sbjct: 418 EPI--YELSSVIVHKGKIDNGHYISYSRQGAEWFRFDDSMVVQVDEKEVLGAEAYMLFYV 475


>gi|328772278|gb|EGF82316.1| hypothetical protein BATDEDRAFT_32836 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 473

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 190/365 (52%), Gaps = 40/365 (10%)

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           N+G+TCFMN++LQ   H P LR +FLSD+H+R +C  K+  + CL+C++D +F   + G 
Sbjct: 94  NMGSTCFMNTILQTFIHNPLLRAHFLSDKHDRRFCPRKS--QPCLSCEMDDLFCQFYNGK 151

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
             PY P+ FLY+ W    +LA Y+QQDAHEFFIS+L+ IH           S  +   C+
Sbjct: 152 TTPYGPSSFLYAMWMSQKHLAGYQQQDAHEFFISVLNEIHNSCSGQHSHAHSSAHQCQCV 211

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
            H+VF G+L+SDV C  CG  +T +DP +D SLD++ N   S    +       +     
Sbjct: 212 IHQVFGGLLQSDVTCQKCGNVTTVWDPILDISLDIKSNTKLSGPKKANLGTKKNSFPDTN 271

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKLPLVSCFHI 441
            + S+     +L+ CL+ FT PERLG +Q + C  C    QE+ KQ+S++ LP V    +
Sbjct: 272 EHRSKIAEPYSLLQCLEGFTIPERLGPNQ-YTCASCANTHQEATKQLSMKHLPPVLAIQL 330

Query: 442 KRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           KRFEH++  + +                                    G ++ T   P+ 
Sbjct: 331 KRFEHTATARTA------------------------------------GFDTLTDGNPTY 354

Query: 502 EFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           ++ LFA+V H GK+D GHY  Y +  ++W+  DD  +T   +     + GYM FY++   
Sbjct: 355 KYSLFAIVNHEGKIDTGHYKAYAKCRDQWFMFDDHTVTMTTQRVALESNGYMCFYIRDNA 414

Query: 562 YYKAS 566
            Y  S
Sbjct: 415 EYAPS 419


>gi|392594379|gb|EIW83703.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
          Length = 671

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 257/555 (46%), Gaps = 108/555 (19%)

Query: 57  RRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDV 116
           +R    VP C  C   +  R + C++C+   C       H+  H  ++     H    D 
Sbjct: 84  KRRKVGVPTCDTCY-MTLARPFVCLSCSFGGCWA---EGHMVDHLRESG----HSFCADT 135

Query: 117 DRAELFCCACRDQVYDRDFDAA-----VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDL 171
               ++C  C D +++   D A     + +  T S+ Q SK        R  Y+P  P  
Sbjct: 136 RSGSVYCADCEDFIFNDIMDEARLQTQLAVEETQSMFQVSK------MSREPYKPHLPSS 189

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR 231
            +  L+ + A P+   S          RGL NLG TCFMN VLQA  H P LR +FL+D+
Sbjct: 190 EDTDLLKSTA-PLPCQSR---------RGLLNLGQTCFMNVVLQAFVHNPLLRGFFLADK 239

Query: 232 HNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM---------PYSPAKFLYSWWRHASNL 282
           HN   C++ +    C  C++D +FS ++              P+ P  FL + W+ A +L
Sbjct: 240 HNARLCKNTD----CTCCEMDALFSEVYAPSSYFTPSGAPPPPFGPTSFLATTWKTAKDL 295

Query: 283 ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACG 341
           + + QQDAHEFFIS L+ IH          R   N  C CI H  F+G L+SDV C  CG
Sbjct: 296 SGHAQQDAHEFFISALNQIHATA-------RGSTNVSCNCIVHSTFAGQLQSDVTCERCG 348

Query: 342 FTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRF 401
            T++T D  +D SL+L   +GS             N +  G     N    TL  CL+ +
Sbjct: 349 NTTSTVDMMLDISLEL---RGSG------------NSKGAGGREEGN----TLASCLNSY 389

Query: 402 TRPERLGSDQKFFCQQCQV-RQESLKQMSIRKLPLVSCFHIKRFEHSS------------ 448
           T+PE+LGS + + C  C     ++ K++S RKLP +  F  KRFEH +            
Sbjct: 390 TKPEKLGS-KDYTCSNCTSPSHDATKRLSFRKLPPILSFQFKRFEHRTPAGHGSAKAGSG 448

Query: 449 -----VRKMSRKVDRYLQFPLSLDMAPYLSSSI-------LRSRFGNRFFPFDGDESNTL 496
                +  +  K+D  ++FP  ++MAP+ ++++       L  ++G    P         
Sbjct: 449 AAAVAMVGVPTKLDAPIRFPAGVNMAPWTAAALGSGSGAGLIGKWGRYPGP--------- 499

Query: 497 NEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ--GYM 553
            +   E++LFAV+ H G ++D GHY  Y R  ++WY+ DD  +T    +   ++    YM
Sbjct: 500 -DAMYEYDLFAVINHEGAQMDQGHYTNYARSGDEWYRFDDDKVTPSTLSHALSSHHNAYM 558

Query: 554 MFYVQKMLYYKASEK 568
            FY ++ L YK   K
Sbjct: 559 CFYAKRHLDYKPHTK 573


>gi|195166685|ref|XP_002024165.1| GL22694 [Drosophila persimilis]
 gi|194107520|gb|EDW29563.1| GL22694 [Drosophila persimilis]
          Length = 799

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/406 (37%), Positives = 214/406 (52%), Gaps = 76/406 (18%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C  CG +S  +LYAC+ C    C      SH+  H      A  H +A+++    L+C A
Sbjct: 431 CFECGSASI-QLYACLHCIYFGCR----GSHIHSHL----RAKKHHVALELSHGTLYCHA 481

Query: 126 CRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
           CRD +YD R  + A++         + K E    ++ + ++PW P  ++ +L++ N  P 
Sbjct: 482 CRDFIYDSRSREYALI---------NRKLEAKDLQKSLGWQPWIPSAKDSNLLLAN--PR 530

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
             +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+SDRH+   C S   + 
Sbjct: 531 RRLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD---CAS---LA 582

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
            CL C++ +  S  + G R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H  
Sbjct: 583 QCLVCEV-SRLSEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRH 641

Query: 305 VEKDQHKPRSQGN------------------GDC-CIAHRVFSGILRSDVMCMACGFTST 345
             K + +  S+ N                  G C CI  ++F+G+L+SDV+C AC   ST
Sbjct: 642 CVKAKAEHESKSNSSSSGSGTNSTSSSTSSYGQCNCIIDQIFTGMLQSDVVCQACKGVST 701

Query: 346 TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS--TLMGCLDRFTR 403
           TFDP  D SLDL                           ++ + G++  TL+ CL+R+TR
Sbjct: 702 TFDPFWDISLDLG-------------------------ETTTHGGVTPKTLIDCLERYTR 736

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
            E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEHS++
Sbjct: 737 AEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL 782


>gi|327308974|ref|XP_003239178.1| ubiquitin C-terminal hydrolase Ubp8 [Trichophyton rubrum CBS
           118892]
 gi|326459434|gb|EGD84887.1| ubiquitin C-terminal hydrolase Ubp8 [Trichophyton rubrum CBS
           118892]
          Length = 486

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 248/545 (45%), Gaps = 91/545 (16%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHI--KPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYAC 80
           C HL D   ++     R  ++   +  K P   + IR D+S+    G     S    Y C
Sbjct: 15  CEHLKDIFEKDTDAATRLAENYTKLSGKGPWNLSQIRLDASKQSSSG--PKFSLKPQYQC 72

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C+ V          V     + SS   H    D     +FC  C D +YD D +    
Sbjct: 73  LHCSVVG---------VKAARCEHSSQTGHIFFADYRSKHVFCQGCDDLIYDIDLE---- 119

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                SI+++S    + ++R++D      D     + +N    I            G+RG
Sbjct: 120 -----SILKNSTEPIVSRKRKVD--NMEDDEYANYIAMNTNKKICG--------KEGVRG 164

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLG TC+MN +LQ LFH P L  YFL + H+   CQ  N    C  C L   F+    
Sbjct: 165 LFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKAN----CFGCALADAFAEFSN 220

Query: 261 GDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            ++   +     L + W+ +S+LA Y QQDAHEF+  +++ +HE          + G+ D
Sbjct: 221 EEKDESFGALNLLLASWQTSSDLAGYHQQDAHEFYQFLVNQLHES---------TTGHLD 271

Query: 320 C-----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           C     C  H  F G LRS + C  CG  S T DP +D SLDL+  +             
Sbjct: 272 CDPACRCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRA--------- 322

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                 DG + S +    TL GCL+ +  PE+L + + + C QC       KQ+ +RKLP
Sbjct: 323 -----LDGRDQSSDVA-PTLQGCLEGYISPEKLAASE-YGCTQCNSNMGVTKQLRLRKLP 375

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGNRFFPFDGDE 492
           ++ C  +KRFE +  R +S KV+  + +P S++M PY +S  S  RS+F           
Sbjct: 376 VILCMQLKRFERN--RSVSEKVETKVTYPASINMMPYTTSPRSENRSQF----------- 422

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
                    +++L +VV H G +D+GHY+ Y R   +W+K +D  +T V E+ V  A  Y
Sbjct: 423 ---------QYDLLSVVVHIGDIDSGHYLAYCRHGEEWFKFNDDRVTVVAESEVLGADAY 473

Query: 553 MMFYV 557
           ++FY 
Sbjct: 474 LLFYT 478


>gi|326483083|gb|EGE07093.1| ubiquitin carboxyl-terminal hydrolase [Trichophyton equinum CBS
           127.97]
          Length = 486

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 163/545 (29%), Positives = 248/545 (45%), Gaps = 91/545 (16%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHI--KPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYAC 80
           C HL D   ++     R  ++   +  K P   + IR D+S+  + G     S    Y C
Sbjct: 15  CEHLKDIFEKDTDAATRLAENYTKLSGKGPWNLSQIRLDASK--KSGSGPKFSLKPQYQC 72

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C+ V          V     + SS   H    D     +FC  C D +YD D +    
Sbjct: 73  LQCSVVG---------VKAARCEHSSQTGHIFFADYRSKHVFCQGCDDLIYDIDLE---- 119

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                S++++S    + ++R++D      D     + +N    I            G+RG
Sbjct: 120 -----SVLKNSTEPIVSRKRKVD--NMEDDEYANYIAMNTNKKICG--------KEGVRG 164

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLG TC+MN +LQ LFH P L  YFL + H+   CQ  N    C  C L   F+    
Sbjct: 165 LFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKVN----CFGCALADAFAEFSN 220

Query: 261 GDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            ++   +     L + W+ +S+LA Y QQDAHEF+  +++ +HE          + G+ D
Sbjct: 221 EEKDEGFGALNLLLASWQKSSDLAGYHQQDAHEFYQFLVNQLHES---------TTGHLD 271

Query: 320 C-----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           C     C  H  F G LRS + C  CG  S T DP +D SLDL+  +             
Sbjct: 272 CDPACRCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRA--------- 322

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                 DG   S +    TL GCL+ +  PE+L + + + C QC       KQ+ +RKLP
Sbjct: 323 -----LDGGEQSSDVA-PTLQGCLEGYISPEKLAASE-YGCTQCNSNMGVTKQLRLRKLP 375

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGNRFFPFDGDE 492
           ++ C  +KRFE +  R +S KV+  + +P S++M PY +S  S  RS+F           
Sbjct: 376 VILCMQLKRFERN--RSVSEKVETKVTYPASINMMPYTTSPRSENRSQF----------- 422

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
                    +++L +VV H G +D+GHY+ Y R   +W+K +D  +T V E+ V  A  Y
Sbjct: 423 ---------QYDLLSVVVHIGDIDSGHYLAYCRHGEQWFKFNDDRVTVVAESEVLGADAY 473

Query: 553 MMFYV 557
           ++FY 
Sbjct: 474 LLFYT 478


>gi|326469413|gb|EGD93422.1| ubiquitin C-terminal hydrolase Ubp8 [Trichophyton tonsurans CBS
           112818]
          Length = 486

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 163/545 (29%), Positives = 248/545 (45%), Gaps = 91/545 (16%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHI--KPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYAC 80
           C HL D   ++     R  ++   +  K P   + IR D+S+  + G     S    Y C
Sbjct: 15  CEHLKDIFEKDTDAATRLAENYTKLSGKGPWNLSQIRLDASK--KSGSGPKFSLKPQYQC 72

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C+ V          V     + SS   H    D     +FC  C D +YD D +    
Sbjct: 73  LQCSVVG---------VKAARCEHSSQTGHIFFADYRSKHVFCQGCDDLIYDIDLE---- 119

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                S++++S    + ++R++D      D     + +N    I            G+RG
Sbjct: 120 -----SVLKNSTEPIVSRKRKVD--NMEDDEYANYISMNTNKKICG--------KEGVRG 164

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLG TC+MN +LQ LFH P L  YFL + H+   CQ  N    C  C L   F+    
Sbjct: 165 LFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKVN----CFGCALADAFAEFSN 220

Query: 261 GDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            ++   +     L + W+ +S+LA Y QQDAHEF+  +++ +HE          + G+ D
Sbjct: 221 EEKDEGFGALNLLLASWQKSSDLAGYHQQDAHEFYQFLVNQLHES---------TTGHLD 271

Query: 320 C-----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           C     C  H  F G LRS + C  CG  S T DP +D SLDL+  +             
Sbjct: 272 CDPACRCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRA--------- 322

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                 DG   S +    TL GCL+ +  PE+L + + + C QC       KQ+ +RKLP
Sbjct: 323 -----LDGGEQSSDVA-PTLQGCLEGYISPEKLAASE-YGCTQCNSNMGVTKQLRLRKLP 375

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGNRFFPFDGDE 492
           ++ C  +KRFE +  R +S KV+  + +P S++M PY +S  S  RS+F           
Sbjct: 376 VILCMQLKRFERN--RSVSEKVETKVTYPASINMMPYTTSPRSENRSQF----------- 422

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
                    +++L +VV H G +D+GHY+ Y R   +W+K +D  +T V E+ V  A  Y
Sbjct: 423 ---------QYDLLSVVVHIGDIDSGHYLAYCRHGEQWFKFNDDRVTVVAESEVLGADAY 473

Query: 553 MMFYV 557
           ++FY 
Sbjct: 474 LLFYT 478


>gi|432107535|gb|ELK32801.1| Ubiquitin carboxyl-terminal hydrolase 51 [Myotis davidii]
          Length = 294

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 185/309 (59%), Gaps = 23/309 (7%)

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
           ++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H +  KD    +   N
Sbjct: 1   MYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH-RHSKDDSVGQEANN 59

Query: 318 GDCC--IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
            +CC  I  ++F+G L+SDV C  C   STT DPC D SLDL P+  ++  + S++    
Sbjct: 60  FNCCNCIIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDL-PSSCATFNSQSSE---- 114

Query: 376 CNCEADGMNSSQN--CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
               ADG  S  +   GI +L  CL  FTRPE LGS  K  C  CQ  QES KQ++++KL
Sbjct: 115 ---RADGAVSRNDRIPGIPSLTDCLQWFTRPEHLGSGAKIKCSSCQSYQESTKQLTMKKL 171

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
           P+V+CFH+KRFEH  + K  RK++ ++ FPL LDM P+L+S+   SR        DG   
Sbjct: 172 PIVACFHLKRFEH--LGKQRRKINTFISFPLELDMTPFLAST-KESRMK------DGPPP 222

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGY 552
                  +++ LFAV+ H G L++GHY +++R   ++W+ CDDA IT+     +  ++GY
Sbjct: 223 TDCAPNENKYSLFAVINHHGTLESGHYTSFIRQQKDQWFSCDDAVITKATIEDLLYSEGY 282

Query: 553 MMFYVQKML 561
           ++FY ++ L
Sbjct: 283 LLFYHKQGL 291


>gi|240280558|gb|EER44062.1| ubiquitin C-terminal hydrolase [Ajellomyces capsulatus H143]
          Length = 439

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/456 (32%), Positives = 222/456 (48%), Gaps = 69/456 (15%)

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
            H+   D     +FC  C D VYD + ++ +               ++ K+R++D    S
Sbjct: 46  GHKFFTDSRTGTIFCLGCDDYVYDAELESFLF------------DPSVLKKRKLD----S 89

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
            +  +++ ++ NA+              G+RGL NLG TC+MN +LQ L H P L  YFL
Sbjct: 90  GNDDDQAYVIANANKRVCGK-------EGVRGLFNLGQTCYMNVILQTLLHDPLLTTYFL 142

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQ 287
            + H+ Y C  +N    C++C +   F+     D+   +     L + WR +  L+ Y+Q
Sbjct: 143 GNNHHTYDCTIQN----CISCAVSEAFAEFNNDDKTEGFGALNLLLASWRSSPMLSGYQQ 198

Query: 288 QDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTT 346
           QDAHEF+  ++D +H       H      N  C C  H  F G LRS V C  CG  + T
Sbjct: 199 QDAHEFYQFLVDKLHAGA----HDHVEDHNKTCHCFFHNAFYGKLRSSVTCDKCGNVTQT 254

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            D  +D SLD++  +                 +   +   ++    TL GCL  FT PE+
Sbjct: 255 EDQMIDLSLDVQVQK-----------------KKRALGGGESTAAPTLDGCLQSFTSPEK 297

Query: 407 LGSDQKFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS 465
           L +D  + C  C   +Q++ KQ+ IRKLP++ C  +KRFEH+    +S KV+  + FPLS
Sbjct: 298 LMAD-AYNCSGCGSTQQKATKQLRIRKLPVILCMQLKRFEHT--LSVSEKVEGKIDFPLS 354

Query: 466 LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
           ++M PY +    R+ + N     +G  SN L      ++L + V H GKLDAGHY  Y R
Sbjct: 355 INMLPYTT----RAHYKN-----EGGHSNFL------YDLSSAVVHKGKLDAGHYYVYCR 399

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
              +WY  +D  +T VNE  V AA  Y++FY    L
Sbjct: 400 QGEQWYLFNDDQVTVVNEAEVLAADAYLLFYTLHAL 435


>gi|325089175|gb|EGC42485.1| ubiquitin C-terminal hydrolase Ubp8 [Ajellomyces capsulatus H88]
          Length = 441

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 149/453 (32%), Positives = 221/453 (48%), Gaps = 69/453 (15%)

Query: 112 IAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDL 171
           I  D     +FC  C D VYD + ++ +             P  L+KR+ +D    S + 
Sbjct: 51  IVTDSRTGTIFCLGCDDYVYDAELESFLF-----------DPSVLKKRK-LD----SGND 94

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR 231
            +++ ++ NA+              G+RGL NLG TC+MN +LQ L H P L  YFL + 
Sbjct: 95  DDQAYVIANANKRVCGK-------EGVRGLFNLGQTCYMNVILQTLLHDPLLTTYFLGNN 147

Query: 232 HNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDA 290
           H+ Y C  +N    C++C +   F+     D+   +     L + WR +  L+ Y+QQDA
Sbjct: 148 HHTYDCTIQN----CISCAVSEAFAEFNNDDKTEGFGALNLLLASWRSSPMLSGYQQQDA 203

Query: 291 HEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDP 349
           HEF+  ++D +H       H      N  C C  H  F G LRS V C  CG  + T D 
Sbjct: 204 HEFYQFLVDKLHAGA----HDHVEDHNKTCHCFFHNAFYGKLRSSVTCDKCGNVTQTEDQ 259

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
            +D SLD++  +                 +   +   ++    TL GCL  FT PE+L +
Sbjct: 260 MIDLSLDVQVQK-----------------KKRALGGGESTAAPTLDGCLQSFTSPEKLMA 302

Query: 410 DQKFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
           D  + C  C   +Q++ KQ+ IRKLP++ C  +KRFEH+    +S KV+  + FPLS++M
Sbjct: 303 D-AYNCSGCGSTQQKATKQLRIRKLPVILCMQLKRFEHT--LSVSEKVEGKIDFPLSINM 359

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN 528
            PY +    R+ + N     +G  SN L      ++L + V H GKLDAGHY  Y R   
Sbjct: 360 LPYTT----RAHYKN-----EGGHSNFL------YDLSSAVVHKGKLDAGHYYVYCRQGE 404

Query: 529 KWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           +WY  +D  +T VNE  V AA  Y++FY    L
Sbjct: 405 QWYLFNDDQVTVVNEAEVLAADAYLLFYTLHAL 437


>gi|315053813|ref|XP_003176281.1| ubiquitin carboxyl-terminal hydrolase 8 [Arthroderma gypseum CBS
           118893]
 gi|311338127|gb|EFQ97329.1| ubiquitin carboxyl-terminal hydrolase 8 [Arthroderma gypseum CBS
           118893]
          Length = 486

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 165/545 (30%), Positives = 247/545 (45%), Gaps = 91/545 (16%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHI--KPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYAC 80
           C HL D   ++     R  ++   +  K P   + +R D+S+    G     S    Y C
Sbjct: 15  CEHLKDIFEKDTDAATRLAENYTKLSGKGPLNLSRVRLDASKKSAPG--PKFSLKPQYQC 72

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C A+          V     + SS   H    D     +FC  C D +YD D +   V
Sbjct: 73  LQCPAIG---------VKAARCEHSSLTGHIFFADYRSKHVFCQGCDDLIYDVDLEG--V 121

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
           L + T  I S       ++R++D      D     + +N    I            G+RG
Sbjct: 122 LKNNTEPIVS-------RKRKVD--NMEDDEYASYIAMNTNKKICG--------KEGVRG 164

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLG TC+MN +LQ LFH P L  YFL + H+   CQ  N    C  C L   F+    
Sbjct: 165 LFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKVN----CFGCALADAFAEFSN 220

Query: 261 GDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            ++   +     L + W+ +S+LA Y QQDAHEF+  +++ +HE          + G+ D
Sbjct: 221 EEKDEGFGALNLLLASWQKSSDLAGYHQQDAHEFYQFLVNQLHES---------TTGHLD 271

Query: 320 C-----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           C     C  H  F G LRS + C  CG  S T DP +D SLDL+  +             
Sbjct: 272 CDPACRCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRA--------- 322

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                 DG   S +    TL GCL+ +  PE+L + + + C QC   +   KQ+ +RKLP
Sbjct: 323 -----LDGGEQSSDVA-PTLQGCLEGYISPEKLAASE-YGCTQCNSNKGVTKQLRLRKLP 375

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGNRFFPFDGDE 492
           ++ C  +KRFE +  R +S KV+  + +P S++M PY +S  S  RS+F           
Sbjct: 376 VILCMQLKRFERN--RSVSEKVETKVTYPASINMMPYTTSPRSENRSQF----------- 422

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
                    +++L +VV H G +D+GHY+ Y R   +W+K +D  +T V E+ V  A  Y
Sbjct: 423 ---------QYDLLSVVVHIGDIDSGHYLAYCRHGEQWFKFNDDRVTVVAESEVLEADAY 473

Query: 553 MMFYV 557
           ++FY 
Sbjct: 474 LLFYT 478


>gi|47219056|emb|CAG00195.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 427

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/404 (36%), Positives = 205/404 (50%), Gaps = 50/404 (12%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C +CG +   RL++C+ C    C       H+  HA        H +A+D+    ++C  
Sbjct: 38  CHMCG-AHLNRLHSCLYCVFFGCFT---RKHIHEHAKNKR----HNLAIDLLYGGIYCFV 89

Query: 126 CRDQVYDRDFDAAVVLAHTTSII---QSSKPENLRKRRRI-------------------D 163
           C+D +YD+D +         +      SS P  L ++ R                     
Sbjct: 90  CQDYIYDKDMEQIAKEEQRKAWKLQGTSSMPAQLMQQWRCCLDVTFKCLHFLFLRSIGEK 149

Query: 164 YRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPL 223
           +  W P  RE  L+ +N  P     ++N  +  GLRGL NLGNTCFMN ++QAL HTP L
Sbjct: 150 FTTWEPTKRELELLRHN--PKRRKITTNCTI--GLRGLINLGNTCFMNCIVQALTHTPLL 205

Query: 224 RNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           R++FLSDRH    C+ ++    CL C++  +F   + G R P+ P + L+  W HA +LA
Sbjct: 206 RDFFLSDRHK---CEMQSNS--CLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLA 260

Query: 284 SYEQQDAHEFFISMLDGIH-----EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCM 338
            YEQQDAHEF I+ LD +H     + +  D  K  +  N   CI  ++F+G L+SDV C 
Sbjct: 261 GYEQQDAHEFLIAALDVLHRHCKGDTIRDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQ 320

Query: 339 ACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCL 398
            C   STT DP  D SLDL  +       S    + + N E      S   G +TL  CL
Sbjct: 321 VCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSGTMNGE------SHLSGSTTLTDCL 374

Query: 399 DRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
            RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+K
Sbjct: 375 RRFTRPEHLGSSAKIKCGGCHSYQESTKQLTLKKLPIVACFHLK 418


>gi|388851469|emb|CCF54871.1| related to UBP8-Ubiquitin-specific protease component of the SAGA
           complex [Ustilago hordei]
          Length = 777

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 265/623 (42%), Gaps = 129/623 (20%)

Query: 52  GRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSH-VAIHATKTSS---- 106
           G+   +R   + P+C  C      R + C+ CA  +C  PP +    A+  T   S    
Sbjct: 159 GKQVKKRRKLDYPQCHTC-QVDMLRPFICLECAYTACFSPPIADDPTAVTRTLKDSHMIQ 217

Query: 107 ---ACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID 163
              +  H +A+D+    ++C  C+D ++D  F++  V  H T  +  +         +  
Sbjct: 218 HLRSKKHMLAIDLLYGHVYCAECKDFIHDALFES--VQRHETCRVNQNVVGQQFGPSKTT 275

Query: 164 YRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPL 223
                P   + + +++     D+ +S    +PRGLR   N+G TCFMN ++QA  H P L
Sbjct: 276 IEALFPPALDATTVMSKFYETDT-TSVTCRVPRGLR---NMGATCFMNVIIQAFLHNPLL 331

Query: 224 RNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD--------------------- 262
           RNYFLSDRHN   CQ   G ++CLAC++D +FS  +  D                     
Sbjct: 332 RNYFLSDRHNPALCQ---GGKVCLACEMDKIFSEFYSSDPGAIAAGADGSVAAGTQAGNP 388

Query: 263 ----------------RMPYSPAKFLYSWW--RHASNLASYEQQDAHEFFISMLDGIHEK 304
                           + P+ P  FLY  W  + +S L    Q DAHE FIS L+ IH  
Sbjct: 389 PGAVVGENGSTQQTVAKGPHGPTSFLYCLWIDQASSELGQAGQHDAHELFISALNSIHTA 448

Query: 305 VEKD----------------------QHKPRSQGNGD----------------------- 319
           +                          H     G+G+                       
Sbjct: 449 LTSRALERSSLPTFGYEHSDALNLLYDHYEGGGGSGNQSEDEGMGGGGGTPMGLGNGGSG 508

Query: 320 -----CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
                 C+ HR F+G L+SDV C  CG  +TT DP +D SLD+ P       +S T    
Sbjct: 509 GVAGCPCVVHRTFAGQLQSDVTCQRCGKVNTTRDPMLDVSLDVRPESLRRKDSSLTNGGL 568

Query: 375 SCNCEADGMNSSQNCGIST-----------LMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           +   +      S + G S            L  CL R+   E+LG++  + C  C     
Sbjct: 569 TSKAKVPNGKISDSIGSSNGVNGEGEEEQHLTICLQRYCSEEKLGNND-YTCTSCGSAAT 627

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + KQ+S+ +LP V C  +KRFEH+S    + K+D  ++FPL LD+  + ++ I ++   N
Sbjct: 628 ATKQLSLYRLPPVLCIQLKRFEHTS---SAAKIDTKVRFPLVLDLRQFSTAEIRQAT--N 682

Query: 484 RFFPFDGDESNT----LNEPSSE-FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWI 538
                    SN+    + +P +  ++LF VV H G ++ GHY  + +    WYK DD  +
Sbjct: 683 PPVQTSNGSSNSGLAAIPDPDAYLYDLFTVVVHEGSMNTGHYTNFSKWRGSWYKFDDDKV 742

Query: 539 TEVNENTVRAAQGYMMFYVQKML 561
           T   E  V  A+ Y + Y +++L
Sbjct: 743 TPTTEGVVLGARAYQLCYRRRVL 765


>gi|452977995|gb|EME77759.1| hypothetical protein MYCFIDRAFT_216867 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 533

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 242/499 (48%), Gaps = 65/499 (13%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y CM C  VS     H +              H  +V+ +   L+C  CRD VYD  F+ 
Sbjct: 86  YLCMQCPNVSISRERHHT-------------KHGFSVESENGFLYCHECRDFVYDPTFEE 132

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN-ASPIDSMSSSNGDLPR 196
            +  A T+            K+R+       PD  ++ +  N  A+P  +          
Sbjct: 133 -IRTAPTS------------KKRKATTDSSIPDSDKKVVAANTVATPCAAT--------- 170

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRGL N+G TCFM+ +LQ+L H P +R ++L++ H    C+ +     C +C LD +F+
Sbjct: 171 GLRGLYNMGQTCFMSVILQSLIHNPLIRTFYLAEGHRSSECERE----ACTSCALDDIFT 226

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
             +  ++   Y     L + W+    LA Y QQDAHEF   +L+ +HE   +D+ K  ++
Sbjct: 227 DFYATEKHEGYGAVHMLQACWKSGGALAGYSQQDAHEFLGFILNSLHEANTEDEEKKETR 286

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
              DC C+ H+ F+G+ RS V C  C  T+ T +  +D SLD++ + G S+K        
Sbjct: 287 ---DCECVIHQTFAGMYRSTVKCTTCQNTTNTSEAFMDLSLDVK-SAGFSIKKKKL---- 338

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                 +G  + +      L+ CL +FT  E L S + + C +C   +E+ K++ + +LP
Sbjct: 339 ---AMINGTQTVKEALPVDLVECLVKFTTEETLSS-ESYHCPKCDAAREAKKKLILTRLP 394

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG----------NR 484
            V   H+KRF HS     S KVD  ++FP S+D+ PY  S+      G          N 
Sbjct: 395 PVVPIHLKRFSHSKTNGQSTKVDTRVRFPFSIDLGPYTDSNTADVADGHDADDDEDNINV 454

Query: 485 FFPFDGDESNTLNEPSSE-FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
             P    +  T  E     +EL +V+ H GK+D GHY++Y +   +W++ DD+ + +V+E
Sbjct: 455 KMPSKKGDPETAGEAQQPVYELSSVIVHKGKIDNGHYISYSKQGTEWFRFDDSMVVQVDE 514

Query: 544 NTVRAAQGYMMFYVQKMLY 562
             V  A+ YM+FYV   L+
Sbjct: 515 KEVLGAEAYMLFYVVSDLW 533


>gi|396483031|ref|XP_003841613.1| similar to ubiquitin carboxyl-terminal hydrolase 22 [Leptosphaeria
           maculans JN3]
 gi|312218188|emb|CBX98134.1| similar to ubiquitin carboxyl-terminal hydrolase 22 [Leptosphaeria
           maculans JN3]
          Length = 517

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 164/549 (29%), Positives = 265/549 (48%), Gaps = 90/549 (16%)

Query: 23  CPHLADF--HARNGT-KPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           C H+ +   +AR  T + +RAI   +H KP    A     SS+          S   LY 
Sbjct: 39  CEHMGEMFENARKQTLQQYRAILRNIHEKP-SIIAQTHNSSSDAQHV-----VSLRPLYL 92

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTS--SACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           C+ C            ++ I A + S     SH  +V+     ++C  C+D +YD   + 
Sbjct: 93  CLQCP-----------NIMIEADRDSHFETKSHCFSVESREGNVYCGNCQDFIYDEALE- 140

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                    +++  K     K+R+ +    + D +   L+V+N++ +   +        G
Sbjct: 141 ---------VLRQQKG----KKRKYEDTTTTDDHK---LVVSNSTFLPCRAI-------G 177

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL N+G TCFM+ +LQ L H P +RN++LS+ H +  C+ +     C++C LD MF  
Sbjct: 178 LRGLYNMGQTCFMSVILQTLVHNPFIRNFYLSEGHRQADCEKE----ACVSCALDEMFVE 233

Query: 258 IFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
               ++   +     L   W     LA Y+QQDAHE+   +L+ +H           +  
Sbjct: 234 FHSAEKTEGFGAVGLLMGSWLAGEALAGYQQQDAHEYMQFILNTLHLA------NGGTTD 287

Query: 317 NGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
           + DC C+ H+ F G L S V C  C   +T  DP +D SLD+  NQ    K S+   + +
Sbjct: 288 SEDCKCVVHQTFCGKLSSTVTCDNCRNVTTALDPYMDLSLDVR-NQAKKKKLSAGTGDET 346

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                             +  CL+RFT  ERLG+ + + C+ C   Q + KQ+SI++LP 
Sbjct: 347 ---------------PLDIRDCLERFTVKERLGAAE-YTCRTCDSPQNATKQLSIKRLPP 390

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS-----SILRSRFGNRFFPFDG 490
           V   H+KRFEH+  +  S K++  + FP+ LD+ PY ++       L S+  +       
Sbjct: 391 VLSIHLKRFEHA--KSTSSKIETKVTFPVKLDVHPYTTAHKAAVKALASKSASL------ 442

Query: 491 DESNTLNEPSSE--FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
           D ++ +N P++   +EL +VV H GK+D+GHYV+Y R  N W+  DD+ +  V E  V A
Sbjct: 443 DSNHNMNSPANSLVYELSSVVVHKGKMDSGHYVSYSREGNDWFMFDDSKVVLVGEAEVLA 502

Query: 549 AQGYMMFYV 557
           A+ Y++FY+
Sbjct: 503 AEAYLLFYM 511


>gi|453080713|gb|EMF08763.1| cysteine proteinase [Mycosphaerella populorum SO2202]
          Length = 566

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 249/533 (46%), Gaps = 99/533 (18%)

Query: 67  GVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCAC 126
           GV G  +    Y C+ C  VS    PH                H  A++     +FC  C
Sbjct: 87  GVTGGVT----YLCLQCPYVSLTREPHRK-------------DHTFAIESANGFIFCHVC 129

Query: 127 RDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDS 186
           +D VYD  F+A               P N  K+R++       D  ++ L+  N++ I  
Sbjct: 130 KDFVYDISFEAI------------RAPPN--KKRKLSALA---DENDKKLVAANSTSISC 172

Query: 187 MSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC 246
            ++       GLRGL N+G TCFM+ +LQ+L H P +R Y+L++ H    C+ +     C
Sbjct: 173 AAT-------GLRGLYNMGQTCFMSVILQSLIHNPFIRTYYLTEGHRSSDCERE----AC 221

Query: 247 LACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
            +C LD + +  +  ++   Y     L   W++  NLA Y QQDAHEF   +L+ +HE  
Sbjct: 222 TSCALDDIITDFYGTEKHEGYGAVHMLQGCWKNGGNLAGYSQQDAHEFLGFILNSLHEAN 281

Query: 306 EKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            +++ K  ++   DC C+ H+ F+G++RS V C  C   ++T +  +D SLD++ + G  
Sbjct: 282 TEEEEKKDAK---DCECVVHQTFAGMMRSTVTCSTCKTVNSTSEAFMDLSLDIK-SAGVV 337

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
           +K        +     + +          L  CLDR+T  E L SD  + C++C   +E+
Sbjct: 338 VKKKKLALTGATQTVKEQLPVD-------LTECLDRYTTAETLSSDN-YTCRKCDGPKEA 389

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYL-----SSSILRS 479
            K++++ +LP V   H KRF HS   K S+KVD  ++FP  LD++ Y+     SS+    
Sbjct: 390 KKKLTLTRLPPVIPIHFKRFSHSKGSKESQKVDTRVRFPFKLDLSSYVTAPAKSSTEPAK 449

Query: 480 RFGNRF---------------------FPFDGDESNT--------------LNEPSSEFE 504
           + GN                        P    ++ +              ++     +E
Sbjct: 450 KAGNGVSKGAEAAKDHKGEDDDEDGDKMPVKKRQTKSTEEEEKEEDEEEEDISPDQPIYE 509

Query: 505 LFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           L +V+ H GK+D+GHY+ Y +    W++ DD+ + +V++  V  A+ YM+FYV
Sbjct: 510 LSSVIVHKGKIDSGHYICYCKQVEHWFRFDDSMVVQVDDKEVLNAEAYMLFYV 562


>gi|302667460|ref|XP_003025313.1| ubiquitin C-terminal hydrolase Ubp8, putative [Trichophyton
           verrucosum HKI 0517]
 gi|291189418|gb|EFE44702.1| ubiquitin C-terminal hydrolase Ubp8, putative [Trichophyton
           verrucosum HKI 0517]
          Length = 489

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 233/494 (47%), Gaps = 93/494 (18%)

Query: 86  VSCHVPPHSSHVAIHATKTSSA--------------CSHEIAVDVDRAELFCCACRDQVY 131
           +S   P + S + + A+K SS+              CS  +A D     +FC  C D +Y
Sbjct: 59  LSSKGPWNLSQIRLDASKKSSSGPKFSLKPQYQCLQCSVVVA-DYRSKHVFCQGCNDLIY 117

Query: 132 DRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSN 191
           D D +         SI+++S    + ++R++D      D     + +N    I       
Sbjct: 118 DIDLE---------SILKNSTEPIVSRKRKVD--NLEDDEYANYIAMNTNKKICG----- 161

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
                G+RGL NLG TC+MN +LQ LFH P L  YFL + H+   CQ  N    C  C L
Sbjct: 162 ---KEGVRGLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKAN----CFGCAL 214

Query: 252 DTMFSAIFCGDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
              F+     ++   +     L + W+ +++LA Y QQDAHEF+  +++ +HE       
Sbjct: 215 ADAFAEFSNEEKDEGFGALNLLLASWQTSADLAGYHQQDAHEFYQFLVNQLHES------ 268

Query: 311 KPRSQGNGDC-----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
              + GN DC     C  H  F G LRS + C  CG  S T DP +D SLDL+  +    
Sbjct: 269 ---TTGNLDCDPACRCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRA 325

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                          DG + S +    TL GCL+ +  PE+L + + + C QC       
Sbjct: 326 --------------LDGGDQSSDVA-PTLQGCLEGYISPEKLAASE-YGCTQCNSNMGVT 369

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGN 483
           KQ+ +RKLP++ C  +KRFE +  R +S KV+  + +P S++M PY +S  S  RS+F  
Sbjct: 370 KQLRLRKLPVILCMQLKRFERN--RSVSEKVETKVTYPASINMMPYTTSPRSENRSQF-- 425

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
                             +++L +VV H G +D+GHY+ Y R   +W+K +D  +T V E
Sbjct: 426 ------------------QYDLLSVVVHIGDIDSGHYLAYCRHGEQWFKFNDDRVTVVAE 467

Query: 544 NTVRAAQGYMMFYV 557
           + V  A  Y++FY 
Sbjct: 468 SEVLGADAYLLFYT 481


>gi|90399121|emb|CAJ86050.1| H0821G03.1 [Oryza sativa Indica Group]
          Length = 277

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/273 (51%), Positives = 172/273 (63%), Gaps = 32/273 (11%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCP--RL 77
           P PCPHLA +  R+ T+  R ++ CL ++P  GR  IRR+  E+PRC  C   +    RL
Sbjct: 7   PPPCPHLAAY--RHTTRSLRFLRRCLRVRP-LGRPEIRREPRELPRCSPCSSPTSSSSRL 63

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           YAC++CAAV C         A      S++  H+IAVDVDRAELFC AC DQVYD DFD 
Sbjct: 64  YACLSCAAVFC------PTHAASHASASTSGGHQIAVDVDRAELFCGACGDQVYDPDFDH 117

Query: 138 AVVLAHTTSIIQSSKPENL-------RKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
           AVVLA ++S+   S   +        RKRRR++YR W+PD  E +L+    S  D  +S+
Sbjct: 118 AVVLAQSSSLPPPSASPSPSPSPAAPRKRRRVEYRAWAPDPAEFALI----SSADPTTSA 173

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR------ 244
           +   P GLRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNRY C  +  +R      
Sbjct: 174 SAAAPAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEA 233

Query: 245 ----LCLACDLDTMFSAIFCGDRMPYSPAKFLY 273
                CLACDLD ++SA F G+R PYSPAKFLY
Sbjct: 234 NDKAACLACDLDEIYSAAFSGERTPYSPAKFLY 266


>gi|328871780|gb|EGG20150.1| hypothetical protein DFA_07270 [Dictyostelium fasciculatum]
          Length = 785

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 180/320 (56%), Gaps = 44/320 (13%)

Query: 238 QSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
           Q+     +C  C++D +F  IF G +MP++P +FLYS W +++  A YEQQDAHEF IS+
Sbjct: 429 QTWTSTSICFGCEMDILFGQIFSGAKMPFTPHQFLYSCWNYSNYFAGYEQQDAHEFLISL 488

Query: 298 LDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLD 356
           L+GIH           S     C CI H  F G L+S+V C  C FTS+T DP +D SLD
Sbjct: 489 LNGIHSHC-----GGSSNAKEPCNCIVHCTFGGQLKSEVTCTNCKFTSSTTDPFIDISLD 543

Query: 357 LEPNQGSSMKTS-STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
           +  ++        +    HS N      + S N     L+ CLDRFT+PE+L  D+K+FC
Sbjct: 544 IPKSKHHHHHHHDNNNEQHSNNSSGHHHHQSNN-----LLSCLDRFTQPEKL--DEKYFC 596

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C  +QES KQ+S   LP+V CFH+KRFE S   + + K+D +++FPL++DM+P++SS+
Sbjct: 597 SNCNSKQESTKQLSFGTLPVVICFHLKRFEQSLSNRRTHKIDTFIEFPLTVDMSPFISST 656

Query: 476 ---ILRSRF-------------------GNRFFPFDGDESNTLNEP--------SSEFEL 505
               L+ +F                    N+    +  ES+T + P        S  +EL
Sbjct: 657 RKQKLKRKFDSLNNIINEQQQQQESDSNNNQNNKMETSESSTDSTPPTVIPIDDSFVYEL 716

Query: 506 FAVVTHTGKLDAGHYVTYLR 525
           +AVV HTGK+D+GHY ++++
Sbjct: 717 YAVVNHTGKIDSGHYTSFVK 736



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 103/218 (47%), Gaps = 32/218 (14%)

Query: 23  CPHLADFHARN-GTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           C H+  F   N G      +Q  +     G    +R  S     C  C +    R++ C+
Sbjct: 153 CSHVEAFKTENDGLNTLSIVQQYILYWKSGPIGDVRLPSLSCSTCH-CFNG---RIHLCL 208

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD---AA 138
            C  ++C       H+  H  KT     H +A+D +  +++C  C D +YD+ F+     
Sbjct: 209 QCFHLACW---KDKHIISHFDKTG----HYLAMDANLNQIYCNKCNDYIYDKQFEDIMEN 261

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLM----VNNASPIDSMSSSNGDL 194
           V L +  S+   S P      +R+ Y  W P   E +++    V N SP++ +       
Sbjct: 262 VRLEYAVSLQDYSNP----TPKRVKYHVWKPSEEETTILEKNSVLNESPLNML------- 310

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH 232
             GLRGLNNLGNTCFMNS+LQ+  H P LRNYFLSD H
Sbjct: 311 --GLRGLNNLGNTCFMNSILQSFIHNPLLRNYFLSDMH 346


>gi|302504513|ref|XP_003014215.1| ubiquitin C-terminal hydrolase Ubp8, putative [Arthroderma
           benhamiae CBS 112371]
 gi|291177783|gb|EFE33575.1| ubiquitin C-terminal hydrolase Ubp8, putative [Arthroderma
           benhamiae CBS 112371]
          Length = 489

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 245/548 (44%), Gaps = 118/548 (21%)

Query: 25  HLADFHARNGTKPFRAIQDCLHI--KPPGGRAAIRRDSSEVPRCGVCGDSSCPRL----- 77
           HL D   ++     R  ++   +  K P   + IR D+S+         SS P+      
Sbjct: 37  HLKDIFEKDTDAATRLAENYTKLSGKGPWNISQIRLDASK-------KSSSGPKFSLKPQ 89

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+AV                            D     +FC  C D +YD D + 
Sbjct: 90  YQCLQCSAV--------------------------VADYRSKHVFCQGCDDLIYDIDLE- 122

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                   SI+++S    + ++R++D      D     + +N    I            G
Sbjct: 123 --------SILKNSTEPIVSRKRKVD--NMEDDEYANYIAMNTNKKICG--------KEG 164

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           +RGL NLG TC+MN +LQ LFH P L  YFL + H+   CQ  N    C  C L   F+ 
Sbjct: 165 VRGLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKAN----CFGCALADAFAE 220

Query: 258 IFCGDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
               ++   +     L + W+ +S+LA Y QQDAHEF+  +++ +HE          + G
Sbjct: 221 FSNEEKDEGFGALNLLLASWQTSSDLAGYHQQDAHEFYQFLVNQLHES---------TTG 271

Query: 317 NGDC-----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           + DC     C  H  F G LRS + C  CG  S T DP +D SLDL+  +          
Sbjct: 272 HLDCDPACRCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRA------ 325

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
                    DG + S +    TL GCL+ +  PE+L + + + C QC       KQ+ +R
Sbjct: 326 --------LDGGDQSSDVA-PTLQGCLEGYISPEKLAASE-YGCTQCNSNMGVTKQLRLR 375

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGNRFFPFD 489
           KLP++ C  +KRFE +  R +S KV+  + +P S++M PY +S  S  RS+F        
Sbjct: 376 KLPVILCMQLKRFERN--RSVSEKVETKVTYPASINMMPYTTSPRSENRSQF-------- 425

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAA 549
                       +++L +VV H G +D+GHY+ Y R   +W+K +D  +T V E+ V  A
Sbjct: 426 ------------QYDLLSVVVHIGDIDSGHYLAYCRHGEQWFKFNDDRVTVVAESEVLGA 473

Query: 550 QGYMMFYV 557
             Y++FY 
Sbjct: 474 DAYLLFYT 481


>gi|256084798|ref|XP_002578613.1| ubiquitin-specific peptidase 22 (C19 family) [Schistosoma mansoni]
          Length = 489

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 230/493 (46%), Gaps = 84/493 (17%)

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           L AC  C   +C       H+ +H         H ++V  +R ELFC  C D VY     
Sbjct: 69  LLACAHCIHFACW---DYRHIYLHGEDHPD---HYLSVCTERGELFCTGCGDFVYHS--- 119

Query: 137 AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR 196
                         S       +  +  R W P   E  L + + +P+  ++  NG    
Sbjct: 120 -------VAETFHQSACRTYLAQFGLSNRYWRPSFNELRL-IPHITPVLPLTV-NG-CSG 169

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
            +RGL N+GNTCF+N V+QAL HTP LR+Y L+D H    C S    R CLAC++  +  
Sbjct: 170 AMRGLINMGNTCFLNVVIQALTHTPVLRDYLLADLHR---CSSPTRSRNCLACEMVRITQ 226

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQH---- 310
            ++     P+ P   LY+ W HAS+LA YEQ+DAHEF I++L  IH  +  E+  H    
Sbjct: 227 ELYKPVVTPFVPNNLLYAIWLHASHLAGYEQRDAHEFLITLLTLIHGHLVGEESPHDHDV 286

Query: 311 KPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
               + +  C CI H+VF G L S +    C   S+T DP +D SLD+            
Sbjct: 287 SSSRESSDSCDCIVHQVFFGDLESVISYEGCEHRSSTVDPFLDLSLDVIQR--------- 337

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                               G ++L  CL  + RPE +  D   +C QC + + ++KQ S
Sbjct: 338 --------------------GSTSLQACLGSYFRPELI--DGLIWCSQCNIGRPAVKQFS 375

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           +  LP V CF++KR  H +      K++  + FP+ LDMAPYL   +             
Sbjct: 376 LLHLPNVLCFYLKRCHHDT------KINTSITFPVELDMAPYLHQIV------------- 416

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRA 548
           GD+S   +    ++ L+AV+ H+G+ ++GHY  Y+R+    W  CDD  +  VN N V  
Sbjct: 417 GDQSAWYD----KYSLYAVLNHSGQTNSGHYTAYIRVGPTSWCLCDDQKVVSVNLNDVLH 472

Query: 549 AQGYMMFYVQKML 561
              Y++ Y + +L
Sbjct: 473 TDAYVLLYHKNLL 485


>gi|452820117|gb|EME27164.1| ubiquitin carboxyl-terminal hydrolase 22/27/51 [Galdieria
           sulphuraria]
          Length = 838

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 249/563 (44%), Gaps = 116/563 (20%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           + C++C  + C      SH+  H   +     H +  D+    ++C  C+D V D+   +
Sbjct: 12  FLCLSCVYLLCR---KESHILEHRQLSG----HSLFFDMSFLRMYCFDCKDYVADQLSSS 64

Query: 138 AVVLA-------HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
            +           T  +++ +      KR+ +    W P  +E   +   +   D   S+
Sbjct: 65  IISSICRLDWTKKTRQVLKKASLPPTVKRQLL----WIPSQQELEWIKEYSVSPDEKEST 120

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACD 250
               P GL GL NLGN+C+MN++LQ + HT PL+ YFLSD H R  C     ++ C AC 
Sbjct: 121 LFPYP-GLCGLLNLGNSCYMNAILQVMLHTLPLKRYFLSDSH-RSTCSFSRNIQECAACA 178

Query: 251 LDTMFSAIF-------CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
           LD +F   F         +R   SP   L   WRH  +LASY Q DAHEFFI+ ++ + +
Sbjct: 179 LDDLFMKGFHESFEKDLSEREALSPQFILEIIWRHCDSLASYAQHDAHEFFITFVNVLRQ 238

Query: 304 KVEKDQHKPRSQGNGDCC----IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
            +  +   P+ + NG       +   +FSG++ S V C  C   S T +   D SLDL  
Sbjct: 239 HIICEDACPKKERNGMKVNGREVIDHLFSGVIESHVYCGGCKRYSATLEDYFDISLDL-- 296

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
                        NHS   E + M  +++  + TL  CL  FT PE L +    +C  CQ
Sbjct: 297 -------------NHSSQMEKEEMECNES--VRTLQECLTYFTSPEELDNGTTRYCDYCQ 341

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHS-SVRKMSRKVDRYLQFPL-SLDMAPYLSSSIL 477
                 K+++I++LP + CFH+KRF+H    + +S K++  + FP+ SLDM+ Y+SS IL
Sbjct: 342 QHTSFYKRVAIQRLPQILCFHLKRFQHGLDGKGVSSKIESEIGFPIRSLDMSRYISSEIL 401

Query: 478 R-----------------------------------SRFGNRFFPF-------------- 488
                                               S F    FP               
Sbjct: 402 ERNDLPQASPIGVERDDEEDIQFKSISKAKKDDEISSSFIQNDFPLSESKEYLCSRSTKE 461

Query: 489 ------DGDESNT--------LNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCD 534
                 DG   NT         NE    ++L+AVV H GK+D GHY+T++R  N W KCD
Sbjct: 462 QLSELNDGSNMNTSLWNIQSNYNEEEIFYDLYAVVNHIGKMDHGHYITWIREQNTWLKCD 521

Query: 535 DAWITE---VNENTVRAAQGYMM 554
           D  I+      E+   ++Q Y+M
Sbjct: 522 DEVISVEPFSTESVASSSQAYLM 544


>gi|189194593|ref|XP_001933635.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187979199|gb|EDU45825.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 517

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 269/545 (49%), Gaps = 82/545 (15%)

Query: 23  CPHLADF--HARNGT-KPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           C H+ +   +AR  T + +RAI   +H KP    + I +  S      V    S   L+ 
Sbjct: 39  CEHMGEMFENARKQTLQHYRAILQNIHEKP----SIIAQTYSSTDGRNVV---SLRPLFL 91

Query: 80  CMACAAVSCHVPPHSSHVAIH-ATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           C+ C ++   V        +H  TK     SH  +V+     ++C  C+D +YD   +  
Sbjct: 92  CLQCPSIMTEVDRD-----LHFETK-----SHCFSVESRDGNIYCGNCQDYIYDEALE-- 139

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGL 198
                   I++  K    +KR+  D    +    +  L+++N++ +   +        GL
Sbjct: 140 --------ILRLQKG---KKRKYED----TTTTEDHKLVISNSTFLPCRAI-------GL 177

Query: 199 RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAI 258
           RGL N+G TCFM+ +LQ L H P +RN++LS+ H +  C++ +    C++C LD MF   
Sbjct: 178 RGLYNMGQTCFMSVILQTLVHNPFIRNFYLSEGHKQTDCENAS----CVSCALDEMFVEF 233

Query: 259 FCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
              ++   +     L   W     LA Y+QQDAHE+   +L+ +H       +   +  +
Sbjct: 234 HSAEKTEGFGAVSMLMGSWLAGEALAGYQQQDAHEYMQFILNTLHLA-----NGGSTDDS 288

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
            DC C+ H+ F G L S VMC  C   +T  DP +D SLD+   QG   K    +     
Sbjct: 289 EDCKCVVHQTFCGKLSSTVMCDNCRNVTTALDPYMDLSLDVRI-QGKKRKQQLAEKGEET 347

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
             +              L  CL+RFT  E+LGS   + C+ C   Q + KQ+SI++LP V
Sbjct: 348 PLD--------------LRDCLERFTVKEKLGS-ADYTCRNCDSPQNATKQLSIKRLPPV 392

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGNRFFPFDGDESN 494
              H+KRFEH+  +  S K++  ++FP+ LD+ PY ++  + +R+   +   P     ++
Sbjct: 393 LSIHLKRFEHT--KSTSSKIETPVRFPVKLDIHPYTTAHKAAMRAAKTSGAPP----SNH 446

Query: 495 TLNEPSSE--FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
            +N P++   +EL +V+ H GK+D+GHY++Y R  + W+  DD+ +  V+E  V AA+ Y
Sbjct: 447 NINSPTNALIYELSSVIVHKGKIDSGHYISYSREGSDWFMFDDSKVVLVSEAEVLAAEAY 506

Query: 553 MMFYV 557
           ++FY+
Sbjct: 507 LLFYM 511


>gi|254566709|ref|XP_002490465.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
 gi|238030261|emb|CAY68184.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
 gi|328350857|emb|CCA37257.1| ubiquitin carboxyl-terminal hydrolase 22/27/51 [Komagataella
           pastoris CBS 7435]
          Length = 502

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/530 (30%), Positives = 244/530 (46%), Gaps = 89/530 (16%)

Query: 32  RNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDS-SCPRLYACMACAAVSCHV 90
           RNG  P     D   ++       + R  ++  RC  C +S SC   Y C+ C+ V C  
Sbjct: 54  RNGNIPLYKTSDGSKVE----YKKLARLRNKAVRCRECLESLSCT--YFCLQCSHVGCW- 106

Query: 91  PPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQS 150
              + H + H   T     H   +D     +FC  C D V D+  +          I QS
Sbjct: 107 --KNGHASAHTKSTG----HVFGIDSQTGYIFCFRCGDYVGDQRLEF---------IRQS 151

Query: 151 SKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFM 210
            + E           P   +L   +++  +  P  S+ +S G     LRG  N+G TCFM
Sbjct: 152 KQGERTE--------PIMNNLGTETIIDGSRPP--SLKASTG-----LRGFINMGATCFM 196

Query: 211 NSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPA 269
           +S++Q + H P +R+YFLS  H +  C  K  +  C+ C +D +F   +  D    Y P 
Sbjct: 197 SSIVQTIVHNPFVRDYFLSGYHAK--CTKK--MDTCITCCIDEIFKVFYGTDETKGYGPT 252

Query: 270 KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFS 328
             L + WR  ++LA Y +QDAHEF+  +LD IH K + + H P       C CI H+ F+
Sbjct: 253 ALLTAAWRVKNSLAGYSEQDAHEFWQFLLDEIH-KSDTELH-PELDDTSTCRCITHKTFA 310

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G L+S V C  C  +  T DP +D SL++        K S  K                 
Sbjct: 311 GQLQSTVTCEKCLHSKNTVDPMLDLSLEIA-------KISKDK----------------- 346

Query: 389 CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS 448
               TL  CLD FT  E+L  D    C  C+      KQ+ +RKLP +  F +KRFEHS+
Sbjct: 347 ---VTLNDCLDLFTSKEKL--DSMTICSHCKKETTRTKQLLVRKLPPILAFQLKRFEHSA 401

Query: 449 VRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAV 508
               S K++ ++ FPL LDM PY  S  L S           +E    +     ++LFA+
Sbjct: 402 --SSSTKIETHVGFPLFLDMEPYTVSETLNS-----------NEQGRASWGLMTYQLFAI 448

Query: 509 VTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           V H G ++ GHY+  ++     W+K DD+ IT V+++ V  +  Y+++Y+
Sbjct: 449 VIHIGSVNTGHYICIIKNRDGNWFKFDDSRITLVSQDYVSKSNAYLLYYI 498


>gi|239608131|gb|EEQ85118.1| ubiquitin C-terminal hydrolase Ubp8 [Ajellomyces dermatitidis ER-3]
 gi|327349315|gb|EGE78172.1| ubiquitin C-terminal hydrolase Ubp8 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 467

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 220/488 (45%), Gaps = 76/488 (15%)

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
            Y C+ C+AV   V  ++ +             H+   D     +FC  C D VYD + +
Sbjct: 49  FYPCLECSAVCTTVDRYTHY---------QNSGHKFFTDSRTGTIFCQGCDDYVYDAELE 99

Query: 137 AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR 196
             +             P   RKR+          L   S    + + + + ++       
Sbjct: 100 NFLF-----------DPSGFRKRK----------LGGDSENDGDQAYVAANANKRICGKE 138

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           G+RGL NLG TC+MN +LQ L H P L  YFL + H+ Y C  +N    C++C +   F+
Sbjct: 139 GVRGLFNLGQTCYMNVILQTLLHDPLLTTYFLGNNHHTYDCTVQN----CISCAVSETFA 194

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
                D+   +     L + WR +  L+ Y+QQDAHEF+  ++D +H       H     
Sbjct: 195 EFNNDDKTEGFGALNLLLASWRSSPILSGYQQQDAHEFYQFLVDKLHAGT----HDHVED 250

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
            N  C C  H  F G LRS V C  CG  + T D  +D SLD++  +             
Sbjct: 251 HNKTCRCFFHNAFYGKLRSSVTCDRCGNVTQTEDQMIDLSLDVQVQK------------- 297

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ-VRQESLKQMSIRKL 433
               +   +   +     TL GCL  FT PE+L +D  + C  C    Q++ KQ+ IRKL
Sbjct: 298 ----KKRALGGGELTTTPTLDGCLQSFTSPEKLMAD-AYNCSGCGGTPQKATKQLRIRKL 352

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
           P++ C  +KRFEH+    +S KV+  + FPLS++M PY +    +S+  N  F +D    
Sbjct: 353 PVILCMQLKRFEHT--LSVSEKVEGKVDFPLSINMLPYTTHQHSKSKGRNSNFMYD---- 406

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYM 553
                      L + V H GKLDAGHY  Y R   +W+  +D  +T VNE  V  A  Y+
Sbjct: 407 -----------LSSAVVHKGKLDAGHYYVYCRQGEQWFLFNDDQVTVVNEAEVLGADAYL 455

Query: 554 MFYVQKML 561
           +FY    L
Sbjct: 456 LFYTLHAL 463


>gi|303311081|ref|XP_003065552.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105214|gb|EER23407.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320039363|gb|EFW21297.1| ubiquitin C-terminal hydrolase Ubp8 [Coccidioides posadasii str.
           Silveira]
          Length = 490

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/501 (31%), Positives = 232/501 (46%), Gaps = 68/501 (13%)

Query: 64  PRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFC 123
           PR       S   LY C+ C A            A H   T     H    D     ++C
Sbjct: 55  PRSASTRRLSFKPLYQCLHCPASRSR-----DGRAAHREMTG----HLFFADCRSGSIWC 105

Query: 124 CACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
             C D +YD + D   VL  T+ IIQ  + ++  K+R I      PD  + S + +N+S 
Sbjct: 106 QGCDDFIYDSEVDR--VLWDTSRIIQ--RTDSTSKKRTIAETLADPDTEDASYLTSNSSK 161

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
              +   +G     +RGL NLG TC+MN ++Q LFH P L +YFL   H  Y C   N  
Sbjct: 162 --RLCGKDG-----VRGLYNLGQTCYMNVIMQTLFHEPLLTSYFLGHGHRIYDCSEAN-- 212

Query: 244 RLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             C  C +   F+     ++   ++    L S W+ + +LA Y+QQDAHEF+  +++ +H
Sbjct: 213 --CFVCQVAETFAEFNNDEKQEGFNCLNLLLSSWQSSPDLAGYQQQDAHEFYQFLVNKLH 270

Query: 303 EKVEK--DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
              E   D +  R +     C  H+ F G L+S V C  CG T+ T DP +D SL  +  
Sbjct: 271 ATAEDRVDGYDQRCR-----CFFHKAFFGKLQSSVTCHNCGNTNRTEDPIMDLSLAFQVQ 325

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
           +         K+ H    E+D           TL GCL+ +T PE L +   + C  C  
Sbjct: 326 R-------KKKALHWTPGESD--------TTPTLNGCLESYTAPEELPA-SDYSCSWCGT 369

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            Q + KQ+ +R LP++ C  +KRFE    R +S KVD  + FPLS++MAPY +       
Sbjct: 370 PQGATKQLRLRNLPVILCMQLKRFERH--RSVSEKVDAKVSFPLSINMAPYTT------- 420

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITE 540
                       S++ N     ++L +VV H G +D+GHY+ Y R    W+K +D  +T 
Sbjct: 421 -----------RSHSKNVLKYTYDLLSVVVHIGDIDSGHYLAYCRQGELWFKFNDDRVTW 469

Query: 541 VNENTVRAAQGYMMFYVQKML 561
             E  V  A  Y++FY  + L
Sbjct: 470 ATEAEVLDADAYLLFYTLRSL 490


>gi|295664669|ref|XP_002792886.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
           'lutzii' Pb01]
 gi|226278407|gb|EEH33973.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
           'lutzii' Pb01]
          Length = 466

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 222/488 (45%), Gaps = 77/488 (15%)

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           +YAC+ C AV C      +H             H+   D   + +FC  C D VYD + +
Sbjct: 49  IYACLECLAV-CRAGNRYAHY--------ENFGHKFFTDSRTSAIFCLGCDDYVYDTELE 99

Query: 137 AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR 196
             +             P  + KR+  D    S    +++ +  NAS              
Sbjct: 100 NFLF-----------DPSGILKRKFDD----SESEEDQTYVGANASKRVCGK-------E 137

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           G+RGL NLG TC+MN +LQ L H P L  YFL + H  Y C  +N    C++C +   FS
Sbjct: 138 GVRGLFNLGQTCYMNVILQTLLHDPLLTTYFLGNNHLTYDCTVQN----CISCAVSEAFS 193

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
                ++   +S    L + WR +  L+ Y+QQDAHEF+  ++D +H       +     
Sbjct: 194 EFNNDEKTEGFSALNLLLASWRSSPILSGYQQQDAHEFYQFLVDKLHAGA----NDHVED 249

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
            N  C C  H  F G LRS V C  CG  + T D  +D SLD++  +             
Sbjct: 250 HNKACHCFFHNAFYGKLRSSVTCDKCGNVTQTEDQMIDLSLDVQVQK------------- 296

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKL 433
               +   +   ++    TL GCL  FT PE+L +D  + C  C    Q++ KQ+ IRKL
Sbjct: 297 ----KKRALGGGESTTTPTLDGCLQSFTSPEKLMAD-AYNCGGCGGTPQKATKQLRIRKL 351

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
           P++ C  +KRFEH+    +S KV+  + FPLS++M PY +             P+    S
Sbjct: 352 PVILCMQLKRFEHT--LSVSEKVEGKVDFPLSINMLPYTTR------------PY---SS 394

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYM 553
              N     ++L + V H GKLDAGHY  Y R   +W+  +D  +T VNE  V  A  Y+
Sbjct: 395 TPTNNSGYIYDLSSTVVHKGKLDAGHYYVYCRQGEQWFLFNDDQVTAVNEAEVLGADAYL 454

Query: 554 MFYVQKML 561
           +FY    L
Sbjct: 455 LFYTLHAL 462


>gi|258567972|ref|XP_002584730.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237906176|gb|EEP80577.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 412

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 217/453 (47%), Gaps = 62/453 (13%)

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLR 172
             D     ++C +C D +YD + D   VL  T+  +Q  + + L K+R +       D  
Sbjct: 15  VADCRSGSIWCQSCEDFIYDTEVDR--VLRDTSKDLQ--RKDLLSKKRSMSEALAYADAE 70

Query: 173 ERSLMVNNASPIDSMSSSNGDL--PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSD 230
           E S + +N         SN  +    G+RGL NLG TC+MN +LQ LFH P L  YFL  
Sbjct: 71  EASYLASN---------SNKRICGKDGMRGLYNLGQTCYMNVILQTLFHEPLLTTYFLGH 121

Query: 231 RHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDA 290
           RH  Y C   N    C  C +  +F+         +    FL S W  + +LA Y+QQDA
Sbjct: 122 RHRMYDCSESN----CFVCQVAEVFAEFHEEKEEGFGVLNFLLSSWLSSPDLAGYQQQDA 177

Query: 291 HEFFISMLDGIHEKVEK--DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
           HEF+  +++ +H   E   D ++ + +     C  H+ F G L+S V C  C  T+ T D
Sbjct: 178 HEFYQFLVNKLHATAEDHVDGYEQKCR-----CFFHKAFFGKLQSSVTCHRCRNTNRTED 232

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P +D SL  +  +         K+ H    +++   S        L GCLD +T PE L 
Sbjct: 233 PIMDLSLAFQVQR-------KKKALHWIPGDSESTPS--------LNGCLDSYTAPEELP 277

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
           +   + C  C   Q + KQ+ +RKLP++ C  +KRFE    R +S KVD  + FP S++M
Sbjct: 278 A-SDYNCSWCGTPQGATKQLRLRKLPVILCMQLKRFERH--RSVSEKVDTKVAFPFSINM 334

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN 528
           APY +S                  +N+ N     ++L +VV H G +D+GHY+ Y R   
Sbjct: 335 APYTTS------------------ANSKNIFKYTYDLLSVVVHIGDIDSGHYLAYCRQGE 376

Query: 529 KWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           +W+K +D  +T   +  V  A  Y++FY  + L
Sbjct: 377 QWFKFNDDRVTWATDAEVLDADAYLLFYTLRSL 409


>gi|440638431|gb|ELR08350.1| hypothetical protein GMDG_03145 [Geomyces destructans 20631-21]
          Length = 527

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/469 (31%), Positives = 232/469 (49%), Gaps = 63/469 (13%)

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           +H   VD     LFC  C D V+D   +   +    T    S      RKR+R +  P++
Sbjct: 105 AHMFYVDSRSGGLFCQMCDDFVWDPTLEELRLRKIGTGSFSS------RKRKRDE--PFT 156

Query: 169 -PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF 227
            P   + + M  N +     ++       GLRG+ N+G+TCFM+ +LQ+  H P LRN++
Sbjct: 157 DPAKDDTAYMSINTTAAPCRAA-------GLRGIFNMGSTCFMSVILQSFVHNPLLRNFY 209

Query: 228 LSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWW----RHASNL 282
           L D H    C   N    CL+C +D +F A +  +    Y  +K L   W       S L
Sbjct: 210 LRDGHQVGQCTQDN----CLSCGMDELFQAFYSEETTASYVASKMLSDSWLCQQAAFSEL 265

Query: 283 ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG--------DC-CIAHRVFSGILRS 333
           A Y++ DAHE+F  + + +H    +++H   +  N         +C CI H+ F G  +S
Sbjct: 266 AGYDEHDAHEYFQFLAEELHRTNRQERHASPTGANASNVSHLTSNCDCIVHQTFYGKFQS 325

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
            + C  CG  +T+ +P +D SL ++         +  + N+      +G +S +     T
Sbjct: 326 TLTCQNCGVVTTSVEPFLDLSLAID-------SIAKRQGNN------NGESSHEWSQPLT 372

Query: 394 LMGCLD-RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKM 452
           L  CLD  + +PER     ++ C+ C   QE+ KQ+SI+ LP V C   KRFEH    + 
Sbjct: 373 LQRCLDVEYMQPERC----EYSCRSCDSPQEARKQLSIKNLPNVLCIQFKRFEHHKSLRT 428

Query: 453 SRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
           S K+   +QFPL L+M PY           NR    D  E+  L   S  ++L +VV H 
Sbjct: 429 SAKIHLKVQFPLQLNMLPY----------TNRARTQDTSENFELAR-SCTYDLLSVVVHV 477

Query: 513 GKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           GKL++GHY++Y R+ N+W+K DD  +T  +E+ V  A+ +++FY+ + L
Sbjct: 478 GKLNSGHYISYSRVGNQWFKFDDHKVTMASESHVLGAEAFLLFYIIRSL 526


>gi|119194659|ref|XP_001247933.1| hypothetical protein CIMG_01704 [Coccidioides immitis RS]
 gi|392862828|gb|EAS36501.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
          Length = 490

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 233/501 (46%), Gaps = 68/501 (13%)

Query: 64  PRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFC 123
           PR       S   LY C+ C      V       A H   T     H    D     ++C
Sbjct: 55  PRSASTRRLSFKPLYQCLHCP-----VSRSRDGRAAHREMTG----HLFFADCRSGSIWC 105

Query: 124 CACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
             C D +YD + D   VL  T+ II+  + ++  ++R I     +PD  + S + +N+S 
Sbjct: 106 QGCDDFIYDSEVDR--VLWDTSRIIR--RTDSTSEKRTIAETLANPDTEDASYLTSNSSK 161

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV 243
              +   +G     +RGL NLG TC+MN ++Q LFH P L +YFL   H  Y C   N  
Sbjct: 162 --RLCGKDG-----VRGLYNLGQTCYMNVIMQTLFHEPLLTSYFLGHGHRIYDCSEAN-- 212

Query: 244 RLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             C  C +   F+     ++   ++    L S W+ + +LA Y+QQDAHEF+  +++ +H
Sbjct: 213 --CFVCQVAETFAEFNNDEKQEGFNCLNLLLSSWQSSPDLAGYQQQDAHEFYQFLVNKLH 270

Query: 303 EKVEK--DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
              E   D +  R +     C  H+ F G L+S V C  CG T+ T DP +D SL  +  
Sbjct: 271 ATAEDRVDGYDQRCR-----CFFHKAFFGKLQSSVTCHNCGNTNRTEDPIMDLSLAFQVQ 325

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
           +         K+ H    E+D           TL GCL+ +T PE L +   + C  C  
Sbjct: 326 R-------KKKALHWTPGESD--------TTPTLNGCLESYTAPEELPA-SDYSCSWCGT 369

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            Q + KQ+ +R LP++ C  +KRFE    R +S KVD  + FPLS++MAPY +       
Sbjct: 370 PQGATKQLRLRNLPVILCMQLKRFERH--RSVSEKVDAKVSFPLSINMAPYTT------- 420

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITE 540
                       S++ N     ++L +VV H G +D+GHY+ Y R    W+K +D  +T 
Sbjct: 421 -----------RSHSKNVLKYTYDLLSVVVHIGDIDSGHYLAYCRQGELWFKFNDDRVTW 469

Query: 541 VNENTVRAAQGYMMFYVQKML 561
             E  V  A  Y++FY  + L
Sbjct: 470 ATEAEVLDADAYLLFYTLRSL 490


>gi|145353130|ref|XP_001420878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581114|gb|ABO99171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 334

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/380 (34%), Positives = 189/380 (49%), Gaps = 68/380 (17%)

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL--CLACDLD 252
           P GLRG  N+GNTCF++S+LQ L  T P+  YFL + H R       G  +  C+AC  D
Sbjct: 5   PVGLRGSLNMGNTCFLSSILQTLVSTAPVVEYFLRENHAR----RAGGCEIDDCVACAFD 60

Query: 253 TMFSAIFCGDRMPYSPA-----------KFLYSWWRHASNLASYEQQDAHEFFISMLDGI 301
              S  +   R+  S A           + LY+WW +  ++A  +QQDAHEFF+S L   
Sbjct: 61  EYVSKAYDDARVATSSAPSTASTALVAGELLYAWWVNEPSMAKEQQQDAHEFFLSFLSVA 120

Query: 302 HEKVEKDQHKPRSQGNGDC----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           H  V     +PR +   D     C+ H  F+G+LRSD+ C +CG ++TT +     SLD+
Sbjct: 121 HANVLGRSIRPRKKRAEDAATCECVFHTAFAGVLRSDIACASCGASTTTREATTGVSLDV 180

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
            P         +TKS+                   +LM CL  FT  E + +  +  C  
Sbjct: 181 PP---------ATKSSRV-----------------SLMECLSNFTAMETIENTSRRVCSA 214

Query: 418 CQVRQESL-KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI 476
           C V  ES  KQ    ++P +  FH KRFE     K  RK D ++ FP  LDM+PY +   
Sbjct: 215 CAVVSESHGKQTRFERVPKILNFHFKRFEGDF--KSMRKNDIHVDFPFDLDMSPYHAH-- 270

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDA 536
                       D  E+N      + +EL++VV H+G L+ GHYV Y+R    W+ CDDA
Sbjct: 271 ------------DCKETN----HDAAYELYSVVQHSGVLEGGHYVAYVRRDGAWFLCDDA 314

Query: 537 WITEVNENTVRAAQGYMMFY 556
            + E +EN V+++Q +M+FY
Sbjct: 315 VVREADENEVKSSQAFMLFY 334


>gi|213408228|ref|XP_002174885.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
           japonicus yFS275]
 gi|212002932|gb|EEB08592.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
           japonicus yFS275]
          Length = 441

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 163/550 (29%), Positives = 242/550 (44%), Gaps = 116/550 (21%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPHL+     N    F   + C  I   G    I         C  CG  S  R   C+ 
Sbjct: 3   CPHLSQL--PNLADTFW--EACQRIWANGNTVCIS--------CEDCGAIS-KRSVQCLH 49

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C  V C           H   T     H++ VD+  A ++C AC D VYDRD +      
Sbjct: 50  CKHVGCLWAEDGKG---HYQNTQ----HKLVVDMKNAYIYCFACEDYVYDRDLERL---- 98

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                   S  ++L +  ++D    SP+  ER + V   +    +   +  +  GLRG+ 
Sbjct: 99  -------RSNCKSL-EAWKLDVGSASPE-EERLMPVKKGT---DLLFKDACITAGLRGMQ 146

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           N+G TCFM+ +LQ++ H P LRN FLS  H   +C+  +    C+AC +D MFS ++   
Sbjct: 147 NMGATCFMSVILQSILHNPTLRNLFLSGYHTSSFCKKSS----CMACAVDDMFSVVY--G 200

Query: 263 RMP----YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
           R+     + P   L   W  + +L  Y QQD HEF + +L+ +H  +           N 
Sbjct: 201 RLDKASFFGPTTILSLMWNISRDLCGYSQQDGHEFLVYLLNQLHVDM-------GGTNNS 253

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
           DC C+ H+VF G + S V C+ C     T DP VD +LD++                   
Sbjct: 254 DCDCVIHKVFGGTMYSTVTCLKCKTKKRTMDPMVDINLDIKE------------------ 295

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                         STL GCL  F  PE +     + C  C    ++ KQ+   KL    
Sbjct: 296 --------------STLEGCLKSFVAPEAV----HYRCSSCN-GLDATKQLQFHKLSPTL 336

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF + S    S K+++Y+ FPL L     L +S  RS+                 
Sbjct: 337 SIQLKRFRNESSTN-SCKIEKYVSFPLRLS----LETSSERSKV---------------- 375

Query: 498 EPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
               ++ LF+VV H G LD GHY+ Y+   N+W++ DD  ITEV+E  V  A+ Y++FY 
Sbjct: 376 ----DYGLFSVVCHKGTLDTGHYIVYILYENQWFQLDDTTITEVSEKQVLQAEAYLLFYH 431

Query: 558 QKMLYYKASE 567
           ++ L+Y+ S+
Sbjct: 432 ERRLFYEKSK 441


>gi|261203673|ref|XP_002629050.1| ubiquitin C-terminal hydrolase Ubp8 [Ajellomyces dermatitidis
           SLH14081]
 gi|239586835|gb|EEQ69478.1| ubiquitin C-terminal hydrolase Ubp8 [Ajellomyces dermatitidis
           SLH14081]
          Length = 456

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 208/452 (46%), Gaps = 67/452 (14%)

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLR 172
             D     +FC  C D VYD + +  +             P   RKR+       S +  
Sbjct: 65  VTDSRTGTIFCQGCNDYVYDAELENFLF-----------DPSGFRKRK---LGGDSENDG 110

Query: 173 ERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH 232
           +++ +  NA+              G+RGL NLG TC+MN +LQ L H P L  YFL + H
Sbjct: 111 DQAYVAANANKRICGK-------EGVRGLFNLGQTCYMNVILQTLLHDPLLTTYFLGNNH 163

Query: 233 NRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAH 291
           + Y C  +N    C++C +   F+     D+   +     L + WR +  L+ Y+QQDAH
Sbjct: 164 HTYDCTVQN----CISCAVSETFAEFNNDDKTEGFGALNLLLASWRSSPILSGYQQQDAH 219

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           EF+  ++D +H       H      N  C C  H  F G LRS V C  CG  + T D  
Sbjct: 220 EFYQFLVDKLHAGT----HDHVEDHNKTCRCFFHNAFYGKLRSSVTCDRCGNVTQTEDQM 275

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
           +D SLD++  +                 +   +   +     TL GCL  FT PE+L +D
Sbjct: 276 IDLSLDVQVQK-----------------KKRALGGGELTTTPTLDGCLQSFTSPEKLMAD 318

Query: 411 QKFFCQQCQ-VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMA 469
             + C  C    Q++ KQ+ IRKLP++ C  +KRFEH+    +S KV+  + FPLS++M 
Sbjct: 319 -AYNCSGCGGTPQKATKQLRIRKLPVILCMQLKRFEHT--LSVSEKVEGKVDFPLSINML 375

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNK 529
           PY +    +S+  N  F +D               L + V H GKLDAGHY  Y R   +
Sbjct: 376 PYTTHQHSKSKGRNSNFMYD---------------LSSAVVHKGKLDAGHYYVYCRQGEQ 420

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           W+  +D  +T VNE  V  A  Y++FY    L
Sbjct: 421 WFLFNDDQVTVVNEAEVLGADAYLLFYTLHAL 452


>gi|290980312|ref|XP_002672876.1| ubiquitin specific protease-like protein [Naegleria gruberi]
 gi|284086456|gb|EFC40132.1| ubiquitin specific protease-like protein [Naegleria gruberi]
          Length = 568

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 234/503 (46%), Gaps = 99/503 (19%)

Query: 108 CSHEIAVDVDRAELFCCACRDQV-YDRDFDAAVVL--AHTTSIIQSSKPENLRKRRRIDY 164
           C ++I   +   E FC  C D V  + D    V+L    ++SI+ +S  +   K+R+I +
Sbjct: 114 CKNDITFHLTYKEFFCLECFDFVTLEHDSLKYVLLPSLFSSSIMNNSSDKQSEKKRKISH 173

Query: 165 RPWSPDLRERSLMVNNASPIDSMSSSNGDLPR----GLRGLNNLGNTCFMNSVLQALFHT 220
                   + +   N  S I +M  S+ +       GLRG+ NLGNTCFMN +LQ L H 
Sbjct: 174 NTSRETTEKTNKDFNLESSIKTMLKSSVNTRENSLLGLRGMVNLGNTCFMNCILQTLSHI 233

Query: 221 PPLRNYFLS-----------DRHNRYYCQSKNGVRLCLACDLDTMFSAIFC--------- 260
            PLRNYFLS           + +  Y  +      L ++  +  M++ ++          
Sbjct: 234 IPLRNYFLSGTTVLKIESEIENNPEYSSEYDLKTYLSISKAVRNMYTEMYNPSNSTTAIK 293

Query: 261 -------------GDRM------PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGI 301
                        GD +      P+ P +FLY  W  A NLA Y+QQDAHEF+I++L  +
Sbjct: 294 SKKRSSNGKRKSDGDEVIEETVFPFVPDQFLYLIWNAAGNLAGYQQQDAHEFYITLLSFL 353

Query: 302 HEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
                     P    N        +F+G ++SD++C  CG  S+T +P +D SL L+   
Sbjct: 354 ---------MPVKLPNNQSNTIQELFTGQVQSDIICKHCGHVSSTMEPILDVSLALK--- 401

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
                               G +  +   + +L  CL+++T  E L  +  + C  C+ +
Sbjct: 402 --------------------GKSGKEWIDLESLEECLEKYTNDESLEIND-YSCSSCKTK 440

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSV--RKM--SRKVDRYLQFPLSLDMAPYLSSSIL 477
               KQ+   KLP + CFH+KRFEH+    RK   S K+D ++ FP +L+M PY+S S  
Sbjct: 441 ATITKQLKFSKLPKLVCFHLKRFEHNEGVGRKSASSSKIDEHISFPFTLNMTPYMSRS-- 498

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSE-FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDA 536
                         ++   N P++E + LF+VV HTG +  GHY  +++   +WY C+D+
Sbjct: 499 -------------SQTKDNNSPTTEEYSLFSVVCHTGDMSGGHYTCFVKHDVQWYLCNDS 545

Query: 537 WITEVNENTVRAAQGYMMFYVQK 559
            +    E  V  ++ Y +FY++K
Sbjct: 546 SVYYAMEEDVADSEAYCLFYMKK 568


>gi|367032392|ref|XP_003665479.1| ubiquitin carboxyl-terminal hydrolase-like protein [Myceliophthora
           thermophila ATCC 42464]
 gi|347012750|gb|AEO60234.1| ubiquitin carboxyl-terminal hydrolase-like protein [Myceliophthora
           thermophila ATCC 42464]
          Length = 521

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 225/468 (48%), Gaps = 52/468 (11%)

Query: 102 TKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRR 161
           TK  S  SH   VD     L+C  C D V+D  F+   +    T    S      RKR+ 
Sbjct: 97  TKHGSKKSHRFYVDSKSGALYCQMCDDIVWDPTFEELRLKKIGTGTFSS------RKRKH 150

Query: 162 IDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTP 221
            +    S  +R+    + + + I S  SS      GLRG+ N G TC+ N VLQ+  H P
Sbjct: 151 EELFETSDPVRDNPTYITSNTTIASCKSS------GLRGIYNAGATCYQNVVLQSFLHNP 204

Query: 222 PLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW---- 276
            LRNY+LSD H+   C     V  CL+C +D MF   +  +    Y+ A  L  +W    
Sbjct: 205 ILRNYYLSDGHSSSTC----NVPYCLSCAMDDMFQDFYALETTNGYTAANILSGFWFSDR 260

Query: 277 RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDV 335
           R   NL + ++QDAHEFF  + + +HE+   D  KP +     C CI H+ F G L+S  
Sbjct: 261 RAFDNLVTTKEQDAHEFFQFLAEELHER-NGDGKKPETGSEHSCNCIIHQTFYGKLQSTT 319

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C  C   +      +D +L LE       K ++++                  G  TL 
Sbjct: 320 TCQNCSGVTHQVQSFLDLNLPLENLSHKKGKKTTSR------------------GQLTLQ 361

Query: 396 GCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KMS 453
            CL+     E + SD+ ++ C  C   Q++ +Q +I++LP V    +KRFE+   R + +
Sbjct: 362 ECLEE----EYVKSDKCEYRCNNCSSMQQARRQTTIKRLPNVLSIQLKRFEYKQGRNERA 417

Query: 454 RKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
            K+D  +QFPL L+M PY +     S  G+     DG + N     S  ++L +VV H G
Sbjct: 418 AKIDTPVQFPLELNMLPYTNRGRTISSNGH-----DGGKENYELARSCTYDLLSVVVHVG 472

Query: 514 KLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           ++D GHYV+Y R+ ++W+  +D  +    ++ V  ++ Y++FY+ + L
Sbjct: 473 EIDTGHYVSYCRVGDQWFAFNDHRVELAQKSDVLNSKAYLLFYIVRSL 520


>gi|121700120|ref|XP_001268325.1| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus clavatus
           NRRL 1]
 gi|119396467|gb|EAW06899.1| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus clavatus
           NRRL 1]
          Length = 491

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 228/490 (46%), Gaps = 91/490 (18%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+  +C      +H        +    H+  ++     LFC +CRD VYD D   
Sbjct: 72  YTCLTCSE-ACVPAKRETH--------TGETGHQFYMESRGRALFCQSCRDLVYDHD--- 119

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVN-NASPIDSMSSSNGDLPR 196
              L    S  Q+   + +R+RR   +   S D  E+ + +N N  P            +
Sbjct: 120 ---LERLRSSSQNGTVQEIRRRR---FSENSSD--EQYVKINANKRPC---------AKQ 162

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           G+RGL NLG TC++N +LQ L H P L  YFL   H  + C + +    C+ C +   F+
Sbjct: 163 GVRGLYNLGQTCYLNVILQTLLHDPILNTYFLGSGHQSHDCNAPD----CIGCAVAEAFA 218

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE---KDQHKP 312
                D+   ++    L + WR +  LA Y QQDAHE++  ++D +H   E   +D  + 
Sbjct: 219 DFNSSDKAEGFAALNLLLASWRASPTLAGYHQQDAHEYYQFLVDKLHASTEGHVEDHDQA 278

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN-----QGSSMKT 367
            S      C  H+ F G LRS V C  CG  + T DP VD SLD++        G  +  
Sbjct: 279 CS------CFFHKTFYGKLRSSVTCDKCGNVTKTEDPMVDLSLDVQVQAKKRAMGGGVGP 332

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLK 426
           S+T                      TL GCL+ FT PE+L +   + C  C    Q++ K
Sbjct: 333 SAT---------------------PTLNGCLESFTSPEKLMAG-VYNCSGCGNTPQKATK 370

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           Q+ I+KLP + C  +KRFEHS    +S KV+  + FPLS++M PY +             
Sbjct: 371 QLRIKKLPAILCMQLKRFEHSLA--VSEKVEGRVDFPLSINMLPYTT------------- 415

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
               + ++ +++    ++L + V H GKLDAGHY  Y +  ++W   +D  +T V E  V
Sbjct: 416 ----NPNSKVDKSKYIYDLSSAVVHKGKLDAGHYYVYCKQGDQWVLFNDDQVTAVAEADV 471

Query: 547 RAAQGYMMFY 556
             A  Y++FY
Sbjct: 472 LNADAYLLFY 481


>gi|407918819|gb|EKG12082.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
           phaseolina MS6]
          Length = 372

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/374 (34%), Positives = 196/374 (52%), Gaps = 34/374 (9%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRGL N+G TCFM+ +LQ L H P ++ ++L + H    C  +     C +C LD +F+
Sbjct: 22  GLRGLYNMGQTCFMSVILQCLIHNPFIKAFYLGEGHLSKDCDREA----CTSCALDEIFT 77

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
             +  ++   Y     L   W  A  LA Y QQDAHE+   +L+ +H++ +      +  
Sbjct: 78  EYYSLEKTEGYGAVNMLLGSWSGAQALAGYSQQDAHEYMQFILNNLHQENDGTDSNGK-D 136

Query: 316 GNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK-----TSS 369
           G GDC C+ H+ FSG L+S V C  C   +T  DP +D SLDL  +Q    K     +SS
Sbjct: 137 GEGDCACLIHKTFSGKLQSTVTCDKCRNVTTAIDPVMDLSLDLR-SQAKKRKLEGGDSSS 195

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQM 428
           T+ N + +                L  CLDRFT  E+L +   + C++C   +Q + KQ+
Sbjct: 196 TEKNQTLD----------------LRDCLDRFTAKEKLPA-ADYSCEKCGGTQQNATKQL 238

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS-RFGNRFFP 487
           SI+KLP V   H+KRFE S  +  S K++  + FPLSLD+ PY +     S +       
Sbjct: 239 SIKKLPPVLPIHLKRFETS--KSTSTKLETKIAFPLSLDLYPYTTRGRASSPKDATANGT 296

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
              D    L  P+  +EL +V+ H GK+D+GHYV+Y R +  W+  DD+ +   +E  V 
Sbjct: 297 ASKDAKGLLPIPTCMYELASVIVHKGKIDSGHYVSYARKNGDWFLFDDSKVVLASEADVL 356

Query: 548 AAQGYMMFYVQKML 561
            A+ Y++ YV + L
Sbjct: 357 RAEAYLLVYVVRSL 370


>gi|384493307|gb|EIE83798.1| hypothetical protein RO3G_08503 [Rhizopus delemar RA 99-880]
          Length = 479

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/430 (34%), Positives = 212/430 (49%), Gaps = 94/430 (21%)

Query: 107 ACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRP 166
           AC H  ++D DR  +FC  C D VYD + D  +    T + I SS+    RK++   + P
Sbjct: 127 ACLH--SMDFDRYTIFCYECNDYVYDLEIDEKI----TKTEIVSSRSR--RKKQHAQFTP 178

Query: 167 WSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNY 226
           W P  +E S++VNN S I S         +G+RGL N+GNTCFMN +LQ+L H P L+ Y
Sbjct: 179 WEPTEQEVSVIVNN-SVISSC--------QGIRGLCNMGNTCFMNVILQSLVHNPLLKAY 229

Query: 227 FLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYE 286
           FLSD H+   C+++N    C+ C+++ +F+ ++ GD+ PY P +FL S W     LA Y 
Sbjct: 230 FLSDNHSPKNCKTQN----CMCCEMNDLFTQLYSGDKQPYGPCRFLQSTWMSQKELAGYA 285

Query: 287 QQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTT 346
           QQDAHEFFIS L+ IH   E   HK     N DC I H+ F+G+L+S+V C+ C   +TT
Sbjct: 286 QQDAHEFFISALNNIHAGCEG--HKL---SNCDC-IIHKTFAGLLQSNVTCLRCKNITTT 339

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            DP +D SL L+P +         KSN S N                      RF+  ER
Sbjct: 340 CDPMLDISLGLKPPE-------KKKSNRSLNGR--------------------RFSHDER 372

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-S 465
                    +Q    ++ L++ SI  L L S         S V   +     ++Q  + +
Sbjct: 373 SS-------KQGNTLKDCLERFSIFHLSLFSVLI------SMVTLGTHSPKNWVQMNIVA 419

Query: 466 LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
            + A + S +I                          + LFAVV H GK+D GHY  + +
Sbjct: 420 ANAAIHFSDNI--------------------------YTLFAVVNHQGKVDTGHYTMFAK 453

Query: 526 LSNKWYKCDD 535
             N+W+K DD
Sbjct: 454 HRNEWFKFDD 463


>gi|71004768|ref|XP_757050.1| hypothetical protein UM00903.1 [Ustilago maydis 521]
 gi|46096854|gb|EAK82087.1| hypothetical protein UM00903.1 [Ustilago maydis 521]
          Length = 778

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 176/639 (27%), Positives = 263/639 (41%), Gaps = 155/639 (24%)

Query: 52  GRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPP-HSSHVAIHATKTSS---- 106
           G    +R   + P+C  C  +   R + C+ CA   C   P H        T+TSS    
Sbjct: 154 GHQVKKRRKLDYPQCHTC-HADMLRPFICLECAFTGCFSSPVHDDRTK--PTRTSSDSHI 210

Query: 107 -----ACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRR 161
                A  H +A D+    ++C +C+D V+D   ++  +  H T  + ++        R+
Sbjct: 211 IQHLQAKKHTLAFDLLYGHIYCASCKDFVHDALLES--IQRHETRRVNANVIGQQFGPRK 268

Query: 162 IDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTP 221
                  P     +            SS    +PRGLR   N+G TC+MN ++QA  H P
Sbjct: 269 TTLESLFPPSASDAAAAMATFYSTDTSSVTCRVPRGLR---NMGATCYMNVIIQAFLHNP 325

Query: 222 PLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD------------------- 262
            LRNYFLSDRHN   C   NG + CLAC++D +FS  +  D                   
Sbjct: 326 LLRNYFLSDRHNASLC---NGAKTCLACEMDKIFSEFYSSDPGALAAGLGTGTGTTGPGA 382

Query: 263 -----------------------RMPYSPAKFLYSWW--RHASNLASYEQQDAHEFFISM 297
                                  + P+ P  FLY  W  + +S L    Q DAHE FIS 
Sbjct: 383 SATTVADAMVRAASQNGTNIPAAKGPHGPISFLYCVWVDQASSELGQAGQHDAHELFISA 442

Query: 298 LDGIHEKVEK-----------------------DQHKPRS-------------------- 314
           L+ IH  +                         D ++  S                    
Sbjct: 443 LNSIHTALTSRAPERSSLPWFAYEHSDALNLLFDHYEGSSGSGNQSEEEGMGGNGGTPMG 502

Query: 315 ---QGNGDC----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
              +GNG      C+ HR F+G L+SDV C  CG  +TT DP +D SLD+ P    SM+ 
Sbjct: 503 LGARGNGGVAGCPCVVHRTFAGQLQSDVTCQRCGKVNTTRDPMLDLSLDVRPE---SMRR 559

Query: 368 SSTKSNHSC--NCEADGMNSS-----QNCGIST-----LMGCLDRFTRPERLGSDQKFFC 415
               S ++   N +   +N        N  I       L  CL R+   E+LG++  + C
Sbjct: 560 KDANSVNAIGNNTKTKLLNGKPAAVHGNGAIEVQEEQHLTICLQRYCSEEKLGNND-YSC 618

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
             C     + KQ+S+ +LP V C  +KRFEH+S    + K+D  ++FPL LD+  + ++ 
Sbjct: 619 TGCGGSASATKQLSLYRLPPVLCIQLKRFEHTS---SAAKIDTKVRFPLVLDVRQFSTAE 675

Query: 476 ILRSRFGNRFFPFD----GDESNT------LNEPSSE---FELFAVVTHTGKLDAGHYVT 522
           I          P D    GD + +      L  P  E   ++LF VV H G ++ GHY  
Sbjct: 676 IRA--------PVDELNHGDSATSNKHTTLLANPDPEAYLYDLFTVVVHEGSMNTGHYTN 727

Query: 523 YLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           + +    WY+ DD  +   +E  V  A+ Y + Y +++L
Sbjct: 728 FSKWRGSWYRFDDDKVHATSEAQVLQARAYQLCYKRRLL 766


>gi|119613629|gb|EAW93223.1| hCG201263, isoform CRA_a [Homo sapiens]
          Length = 417

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/289 (41%), Positives = 172/289 (59%), Gaps = 19/289 (6%)

Query: 276 WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCC--IAHRVFSGILRS 333
           W    +LA Y QQDAHEF I++LD +H +  KD    +   N +CC  I  ++F+G L+S
Sbjct: 142 WISGEHLAGYRQQDAHEFLIAILDVLH-RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQS 200

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
           DV C AC   STT DPC D SLDL P   ++  + + +   S     D +      GI +
Sbjct: 201 DVTCQACHSVSTTIDPCWDISLDL-PGSCATFDSQNPERADSTVSRDDHIP-----GIPS 254

Query: 394 LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
           L  CL  FTRPE LGS  K  C  CQ  QES KQ++++KLP+V+CFH+KRFEH  V K  
Sbjct: 255 LTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEH--VGKQR 312

Query: 454 RKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
           RK++ ++ FPL LDM P+L+S+   SR      P D       NE  +++ LFAV+ H G
Sbjct: 313 RKINTFISFPLELDMTPFLAST-KESRMKEGQPPTDC----VPNE--NKYSLFAVINHHG 365

Query: 514 KLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            L++GHY +++R   ++W+ CDDA IT+     +  ++GY++FY ++ L
Sbjct: 366 TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGL 414


>gi|145236731|ref|XP_001391013.1| ubiquitin carboxyl-terminal hydrolase [Aspergillus niger CBS
           513.88]
 gi|134075474|emb|CAK48035.1| unnamed protein product [Aspergillus niger]
          Length = 490

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 222/484 (45%), Gaps = 80/484 (16%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C        P     A H  KTS    H+  ++     ++C AC D VYD   + 
Sbjct: 72  YTCLTCG----EAMPMGGRKA-HTEKTS----HQFYMESRARTVYCQACGDFVYDHGLER 122

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
            +  + T S +Q +K     KRR  D                +   I S +S      +G
Sbjct: 123 -LRCSTTESALQVAK-----KRRFSDSSA-------------DELYIRSNASKRPCAKQG 163

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           +RGL NLG TC++N +LQ L H P L  YFL + H  + C + +    C+ C +   F+ 
Sbjct: 164 VRGLFNLGQTCYLNVILQTLLHDPILNTYFLGNGHQPHDCTASD----CVGCAVAEAFAD 219

Query: 258 IFCGDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
               D+   ++    L + WR +S LA Y+QQDAHE++  ++D +H   E  +       
Sbjct: 220 FNSSDKPEGFAALNLLLASWRASSTLAGYQQQDAHEYYQFLVDKLHLSTENHR---EGHE 276

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
            G  C  H+ F G LRS V C  CG  + T DP VD SLD++                  
Sbjct: 277 KGCPCFFHKTFYGKLRSSVTCDKCGNVTRTDDPMVDLSLDVQ-----------------V 319

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKLPL 435
             +   M  +      TL GCL+ +T PE+L +   + C  C    Q++ KQ+ IRKLP 
Sbjct: 320 QAKKRAMGGTGVPSTPTLSGCLESYTSPEKLMAG-VYNCSHCGGTPQKATKQLRIRKLPA 378

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS---SILRSRFGNRFFPFDGDE 492
           + C  +KRFEH+    +S K++  + FPLS++M PY +S    + RSRF           
Sbjct: 379 ILCMQLKRFEHTF--SVSEKLEGKIDFPLSINMLPYTTSPQAKVDRSRF----------- 425

Query: 493 SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGY 552
                     ++L + V H GKLDAGHY  Y R  + W   +D  +T V E  V  A  Y
Sbjct: 426 ---------VYDLSSAVVHQGKLDAGHYYVYCRQGDDWVLFNDDKVTAVTEAEVLNADAY 476

Query: 553 MMFY 556
           ++FY
Sbjct: 477 LLFY 480


>gi|190347225|gb|EDK39462.2| hypothetical protein PGUG_03560 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 516

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 243/567 (42%), Gaps = 105/567 (18%)

Query: 22  PCPH----LADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVP------------R 65
           PC H    LA     N    +R     + ++P G R   ++D SE+             R
Sbjct: 19  PCVHVDKVLASRAKENVLTTYRQAVKIVSLRPHGCRVIQKKDGSEIAVTKLMDHKSRALR 78

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C  C  +   + + C+ C  V C    H+     HA +      H  A+D     LFC  
Sbjct: 79  CSDCLSNGFHQTFVCLQCPHVGCINTKHN-----HAHRHYKLSHHSFAIDAHTGLLFCFQ 133

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPID 185
           C D V  +D ++      T  I    K E+L+    I      PD++    +     P+ 
Sbjct: 134 CGDYVNHQDLESI----RTRHIEGIPKSESLK----IPEGSSDPDIKNNYTI----PPVA 181

Query: 186 SMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR--------NYFLSDRHNRYYC 237
           ++S        GL+G  NLG+TCFM+ +LQ   H P ++        +YF  D    Y+ 
Sbjct: 182 AVS--------GLKGFVNLGSTCFMSCILQTFIHNPLVKYQFFNNDLHYFNCDSMQEYHS 233

Query: 238 QSKNGVR--LCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFF 294
            + N      C+ C +D +F   +    +  Y     L + W    +LA +E+QDAHE +
Sbjct: 234 ANPNVTENNACITCSIDVIFRNFYTSTSIEGYGMTNLLMTAWYKNKSLAGFEEQDAHELW 293

Query: 295 ISMLDGIHEKVEKDQHKP---RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
             +L+ +H   E+   +     S+ N   CI H  FSG L S + C  C  T+ T DP +
Sbjct: 294 QFLLNELHSDHERSLQRSSQHESEQNMCQCITHSTFSGTLASSIQCQNCQETTETVDPMI 353

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SL++       +K     +N                    L  CLDRFT  E+L  D 
Sbjct: 354 DLSLEI-----GRLKNKQKTAN--------------------LYDCLDRFTSSEKL--DV 386

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPY 471
            + C  C  + E+ K + I+KL  V    +KRFEH+     S KV+  +  P+ LD++ Y
Sbjct: 387 MYTCHHCGEKSEATKSLKIKKLAPVLSIQLKRFEHNKSNDGSSKVETPVSIPIYLDISKY 446

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKW 530
            S                 DE  T     + +ELFAVV H G ++ GHY+  ++    +W
Sbjct: 447 TS-----------------DEKAT-----NIYELFAVVCHVGSVNTGHYIVVVKDGEGRW 484

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFYV 557
            K DD+ I+ + E+ V +  GY++FY+
Sbjct: 485 LKFDDSVISLIAESEVSSMNGYLLFYI 511


>gi|343426798|emb|CBQ70326.1| related to UBP8-Ubiquitin-specific protease component of the SAGA
           complex [Sporisorium reilianum SRZ2]
          Length = 794

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 173/647 (26%), Positives = 258/647 (39%), Gaps = 162/647 (25%)

Query: 52  GRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPP-HSSHVAIHATKTSS---- 106
           G+   +R   + P+C  C  +   R + C+ CA   C  PP      +I  T   S    
Sbjct: 163 GKQLKKRRKLDYPQCHTC-QADMLRPFICLECAFTGCFSPPIDDDPTSITRTAADSHMIQ 221

Query: 107 ---ACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQS-SKPENLRKRRRI 162
                 H +A D+    +FC  C D V D              ++QS  + E  R  + +
Sbjct: 222 HLRTKKHALAFDLMYGHVFCADCNDFVQD-------------PLLQSIQRHETCRVNQNV 268

Query: 163 DYRPWSPDLRERSLMVNNASPIDSM--------SSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             + + P       +   +    +M        SS    +PRGLR   N+G TC+MN ++
Sbjct: 269 IGQQYGPAKTTVETLFPPSDTAAAMAKFYETDTSSVTCRIPRGLR---NMGATCYMNVII 325

Query: 215 QALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD------------ 262
           QA  H P LRNYFLSDRHN   C   NG + CLAC++D +FS  +  D            
Sbjct: 326 QAFLHNPLLRNYFLSDRHNPSLC---NGAKTCLACEMDKIFSEFYSSDPGALAGAAPGSG 382

Query: 263 -------------------------------------RMPYSPAKFLYSWW--RHASNLA 283
                                                + P+ P  FLY  W  + +S L 
Sbjct: 383 GASSTASAAASAAAPPGAIVAASAAGKSENGASGPAAKDPHGPTSFLYCIWVDQASSELG 442

Query: 284 SYEQQDAHEFFISMLDGIH-------------------------------EKVEKDQHKP 312
              Q DAHE FIS L+ IH                               E      H+ 
Sbjct: 443 QAGQHDAHELFISALNSIHTALTSRALERASLPSFAYDHSDATNLLFDHFEGGGGSGHQS 502

Query: 313 RSQGNGD---------------------CCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
             +G G                       C+ HR F+G L+SDV C  CG  +TT DP +
Sbjct: 503 EDEGMGGHGGTPMGLGGGAGGGGGVAGCPCVVHRTFAGQLQSDVTCQRCGKVNTTRDPML 562

Query: 352 DFSLDLEPN-------QGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST----LMGCLDR 400
           D SLD+ P         G  +  S  KS  +   +  G+N S   G +     L  CL R
Sbjct: 563 DLSLDVRPESMRRRDANGGGVNGSHAKSKLA-TAKPAGLNGSGANGDAEQEQHLTICLQR 621

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
           +   E+LG++  + C  C     + KQ+S+ +LP V C  +KRFEH+S    + K+D  +
Sbjct: 622 YCSEEKLGNND-YACTACGGSASATKQLSLYRLPPVLCIQLKRFEHTSA---AAKIDTKV 677

Query: 461 QFPLSLDMAPYLSSSIL---RSRFGNRFFPFDGDESNTLNEPSSE---FELFAVVTHTGK 514
           +FP+ LD+  + ++ I     +            +S  L  P  E   ++LF VV H G 
Sbjct: 678 RFPVVLDVRQFSTAEIRAPDENAAAAANGAASSKDSGLLANPDPEAYLYDLFTVVVHEGS 737

Query: 515 LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           ++ GHY  + +    WY+ DD  +   +E  V  A+ Y + Y +++L
Sbjct: 738 MNTGHYTNFSKWRGSWYRFDDDKVHATSEAHVLQARAYQLCYRRRLL 784


>gi|67526507|ref|XP_661315.1| hypothetical protein AN3711.2 [Aspergillus nidulans FGSC A4]
 gi|40740729|gb|EAA59919.1| hypothetical protein AN3711.2 [Aspergillus nidulans FGSC A4]
          Length = 397

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 214/455 (47%), Gaps = 74/455 (16%)

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN 180
           LFC  C D VYD          H     +S+ PE+  K          P  R+R    ++
Sbjct: 8   LFCQGCEDLVYD----------HGLERCRSATPESTLK---------GPLARKRRFSESS 48

Query: 181 ASPIDSMSSSNGD--LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
           A  +   S++N      +G+RGL NLG TC++N +LQ L H P L  YFL + H  + C 
Sbjct: 49  ADELYVKSNANRRPCAKQGVRGLFNLGQTCYLNVILQTLLHDPILSTYFLGNGHQPHDCT 108

Query: 239 SKNGVRLCLACDLDTMFSAIFCGDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
               V  C+ C +   F+     D+   ++    L + WR +  LA Y+QQDAHE++  +
Sbjct: 109 ----VADCIGCAVAEAFADFHSIDKPEGFAALNLLLASWRASPTLAGYQQQDAHEYYQFL 164

Query: 298 LDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           +D +H   E ++    +   G  C  HR F G LRS V C  CG  + T DP VD SLD+
Sbjct: 165 VDKLHTSAEGNRE---NHEKGCSCFFHRTFYGKLRSSVTCDRCGNVTKTEDPIVDLSLDV 221

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
           +           T  +                   TL GCL+ FT PE+L +D  + C  
Sbjct: 222 QVQAKKRAMGGGTGPS----------------ATPTLSGCLESFTSPEKLMAD-VYNCSG 264

Query: 418 C-QVRQESLKQMSIRKLPLVSCFHIK--RFEHSSVRKMSRKVDRYLQFPLSLDMAPYLS- 473
           C    Q++ KQ+ I+KLP + C  +K  RFEH+    +S KV+  + FPLS++M PY + 
Sbjct: 265 CGNTPQKATKQLRIKKLPAILCMQLKKQRFEHTF--SVSEKVEGRIDFPLSINMLPYTTN 322

Query: 474 --SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWY 531
             S++ +SR+                     ++L + V H GKL+AGHY  Y R  ++W 
Sbjct: 323 PDSAVDKSRY--------------------TYDLSSAVVHKGKLEAGHYYVYCRQGDEWM 362

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
             +D  +T V E  V     Y++FY  + L   AS
Sbjct: 363 LFNDDQVTPVTEAEVLGVDAYLLFYNLRCLANAAS 397


>gi|146416419|ref|XP_001484179.1| hypothetical protein PGUG_03560 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 516

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/567 (27%), Positives = 243/567 (42%), Gaps = 105/567 (18%)

Query: 22  PCPH----LADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVP------------R 65
           PC H    LA     N    +R     + ++P G R   ++D SE+             R
Sbjct: 19  PCVHVDKVLASRAKENVLTTYRQAVKIVLLRPHGCRVIQKKDGSEIAVTKLMDHKSRALR 78

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C  C  +   + + C+ C  V C    H+     HA +      H  A+D     LFC  
Sbjct: 79  CSDCLSNGFHQTFVCLQCPHVGCINTKHN-----HAHRHYKLSHHSFAIDAHTGLLFCFQ 133

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPID 185
           C D V  +D +    L  T  I    K E+L+    I      PD++    +     P+ 
Sbjct: 134 CGDYVNHQDLE----LIRTRHIEGIPKLESLK----IPEGSSDPDIKNNYTI----PPVA 181

Query: 186 SMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR--------NYFLSDRHNRYYC 237
           ++S        GL+G  NLG+TCFM+ +LQ   H P ++        +YF  D    Y+ 
Sbjct: 182 AVS--------GLKGFVNLGSTCFMSCILQTFIHNPLVKYQFFNNDLHYFNCDSMQEYHS 233

Query: 238 QSKNGVR--LCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFF 294
            + N      C+ C +D +F   +    +  Y     L + W    +LA +E+QDAHE +
Sbjct: 234 ANPNVTENNACITCSIDVIFRNFYTSTSIEGYGMTNLLMTAWYKNKSLAGFEEQDAHELW 293

Query: 295 ISMLDGIHEKVEKDQHKP---RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
             +L+ +H   E+   +     S+ N   CI H  FSG L S + C  C  T+ T DP +
Sbjct: 294 QFLLNELHSDHERSLQRSSQHESEQNMCQCITHSTFSGTLASSIQCQNCQETTETVDPMI 353

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SL++       +K     +N                    L  CLDRFT  E+L  D 
Sbjct: 354 DLSLEI-----GRLKNKQKTAN--------------------LYDCLDRFTSSEKL--DV 386

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPY 471
            + C  C  + E+ K + I+KL  V    +KRFEH+     S KV+  +  P+ LD++ Y
Sbjct: 387 MYTCHHCGEKSEATKSLKIKKLAPVLSIQLKRFEHNKSNDGSSKVETPVSIPIYLDISKY 446

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKW 530
            S                 DE  T     + +ELFAVV H G ++ GHY+  ++    +W
Sbjct: 447 TS-----------------DEKAT-----NIYELFAVVCHVGLVNTGHYIVVVKDGEGRW 484

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFYV 557
            K DD+ I+ + E+ V +  GY++FY+
Sbjct: 485 LKFDDSVISLIAESEVSSMNGYLLFYI 511


>gi|226293373|gb|EEH48793.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides
           brasiliensis Pb18]
          Length = 399

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 208/452 (46%), Gaps = 68/452 (15%)

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLR 172
             D   + +FC  C D VYD   +  +             P  + KR+  D    S    
Sbjct: 9   VTDSRTSAIFCLGCDDYVYDTVLENFLF-----------DPSGILKRKFDD----SESEE 53

Query: 173 ERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH 232
           +++ +  NAS              G+RGL NLG TC+MN +LQ L H P L  YFL + H
Sbjct: 54  DQTYVGANASKRVCGK-------EGVRGLFNLGQTCYMNVILQTLLHDPLLTTYFLGNNH 106

Query: 233 NRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAH 291
             Y C  +N    C++C +   FS     ++   +S    L + WR +  L+ Y+QQDAH
Sbjct: 107 LTYDCTVQN----CISCAVSEAFSEFNNDEKTEGFSALNLLLASWRSSPILSGYQQQDAH 162

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           EF+  ++D +H       +      N  C C  H  F G LRS V C  CG  + T D  
Sbjct: 163 EFYQFLVDKLHAGA----NDHVEDHNKACHCFFHNAFYGKLRSSVTCDKCGNVTQTEDQM 218

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
           +D SLD++  +                 +   +   ++    TL GCL  FT PE+L +D
Sbjct: 219 IDLSLDVQVQK-----------------KKRALGGGESTTTPTLDGCLQSFTSPEKLMAD 261

Query: 411 QKFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMA 469
             + C  C    Q++ KQ+ IRKLP++ C  +KRFEH+    +S KV+  + FPLS++M 
Sbjct: 262 -AYNCGGCGGTPQKATKQLRIRKLPVILCMQLKRFEHT--LSVSEKVEGKVDFPLSINML 318

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNK 529
           PY +             P+    S   N     ++L + V H GKLDAGHY  Y R   +
Sbjct: 319 PYTTR------------PY---SSTPTNNSGYIYDLSSTVVHKGKLDAGHYYVYCRQGEQ 363

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           W+  +D  +T VNE  V  A  Y++FY    L
Sbjct: 364 WFLFNDDQVTAVNEAEVLGADAYLLFYTLHAL 395


>gi|19113904|ref|NP_592992.1| SAGA complex ubiquitin C-terminal hydrolase Ubp8
           [Schizosaccharomyces pombe 972h-]
 gi|1174862|sp|Q09738.1|UBP8_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 8;
           AltName: Full=Deubiquitinating enzyme 8; AltName:
           Full=Ubiquitin thioesterase 8; AltName:
           Full=Ubiquitin-specific-processing protease 8
 gi|984225|emb|CAA90805.1| SAGA complex ubiquitin C-terminal hydrolase Ubp8
           [Schizosaccharomyces pombe]
          Length = 449

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 232/534 (43%), Gaps = 110/534 (20%)

Query: 41  IQDCLHIK-PPGGRAAIRRDSSEVPRCGVCGD--SSCPRL----YACMACAAVSCHVPPH 93
           ++ C H+K  P      ++  +++  C       S+C R+      C++C +V C    H
Sbjct: 5   VEGCQHLKLKPADVENYQKICTQIFSCHFVPRRCSTCKRINKRSIRCLSCHSVGCLWGHH 64

Query: 94  SSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKP 153
               A+  T       H I VDV     +C  C+D VY  +                   
Sbjct: 65  GEEHAMEHT-------HMIGVDVKNGHTYCFGCQDYVYQTEL------------------ 99

Query: 154 ENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR-GLRGLNNLGNTCFMNS 212
           E LR + + + + W  D +      N    +++           GLRG+ NLG TCFM+ 
Sbjct: 100 ETLRFKIK-NIKAWQSDHKRLPEKYNQMVCLEAYRKYPPVCATAGLRGIQNLGATCFMSV 158

Query: 213 VLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP--YSPAK 270
           +LQ++ H P +RN F S  H    C+       C+ C +D MFS+I+        Y P  
Sbjct: 159 ILQSILHNPLVRNLFFSGFHTSTDCKRPT----CMTCAIDDMFSSIYNSKNKSTFYGPTA 214

Query: 271 FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGI 330
            L   W+ + +L  Y QQD HEFF+ +LD +H +       P +      C  HR+FSG 
Sbjct: 215 VLNLMWKLSKSLCGYSQQDGHEFFVYLLDQMHTESGGGTSMPCT------CPIHRIFSGS 268

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDL-EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNC 389
           L++ V C+ C       DP +D SLD+ EP                              
Sbjct: 269 LKNVVTCLDCKKERVAVDPLMDISLDINEP------------------------------ 298

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
              TL GCL+RF   E++    ++ C  C  +  ++KQ+   KLP   C  +KRFE ++ 
Sbjct: 299 ---TLQGCLERFVSKEKV----QYSCHSCGSKN-AIKQLVFDKLPPTICMQLKRFEQNNF 350

Query: 450 RKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
             MS K+D+ + +P           + LR R+               N+   +++L++VV
Sbjct: 351 -AMSTKIDKQVSYP-----------AFLRMRYN-------------FNQDDVDYQLYSVV 385

Query: 510 THTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYY 563
            H G LD GHY+ Y    N+W+  DD  I EV E+ V  +Q Y++FY ++ + Y
Sbjct: 386 CHKGTLDTGHYIAYTYYQNQWFLLDDTTIVEVKESEVLNSQAYLLFYHERQILY 439


>gi|317143602|ref|XP_001819574.2| ubiquitin carboxyl-terminal hydrolase [Aspergillus oryzae RIB40]
 gi|391867358|gb|EIT76604.1| ubiquitin-specific protease [Aspergillus oryzae 3.042]
          Length = 490

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 219/463 (47%), Gaps = 77/463 (16%)

Query: 100 HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKR 159
           H  KT     H+  ++     LFC  C D VYD   +           ++SS PE+  K 
Sbjct: 88  HTGKTG----HQFYMESRSRTLFCQGCGDFVYDYGLER----------LRSSTPESTLKL 133

Query: 160 RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
            +   R +S    +   + +NA+             +G+RGL NLG TC++N +LQ L H
Sbjct: 134 AQ--KRRFSESSTDELYVRSNANKRSCA-------KQGVRGLFNLGQTCYLNVILQTLLH 184

Query: 220 TPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRH 278
            P L  YFL   H  + C   +    C+AC +   F+     D+   ++    L + WR 
Sbjct: 185 DPILNTYFLGSGHQSHDCTMSD----CIACAVAEAFADFNSSDKAEGFAALSLLLASWRA 240

Query: 279 ASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMC 337
           +S LA Y+QQDAHE++  ++D +H   +   H+   +G   C C  H+ F G LRS V C
Sbjct: 241 SSALAGYQQQDAHEYYQFLVDKLHSSTD-GHHENHEKG---CPCFFHKTFYGKLRSSVTC 296

Query: 338 MACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGC 397
             CG  + T DP VD SLD++                    +   M  +      TL GC
Sbjct: 297 DKCGNVTRTDDPMVDLSLDVQ-----------------VQAKKRAMGGAGPSSTPTLSGC 339

Query: 398 LDRFTRPERLGSDQKFFCQQCQ-VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           L+ FT PE+L +   + C  C    Q++ KQ+ I+KLP + C  +KR+EH+    +S K+
Sbjct: 340 LESFTSPEKLMAG-VYNCSGCGGSAQKATKQLRIKKLPAILCMQLKRYEHT--FSVSEKL 396

Query: 457 DRYLQFPLSLDMAPYLS---SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
           +  + FPLS++M PY +   S + +SR+                     ++L + V H G
Sbjct: 397 EGRIDFPLSINMLPYTTNPNSHVDKSRY--------------------IYDLSSAVVHKG 436

Query: 514 KLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           KLDAGHY  Y R  ++W   +D  +T V E  V +A  Y++FY
Sbjct: 437 KLDAGHYYAYCRQGDEWILFNDDQVTSVTEADVLSADAYLLFY 479


>gi|259481747|tpe|CBF75558.1| TPA: ubiquitin C-terminal hydrolase Ubp8, putative (AFU_orthologue;
           AFUA_6G12710) [Aspergillus nidulans FGSC A4]
          Length = 484

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 217/466 (46%), Gaps = 76/466 (16%)

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSP 169
           H+  ++     LFC  C D VYD          H     +S+ PE+  K  R        
Sbjct: 86  HQFYMESRNRALFCQGCEDLVYD----------HGLERCRSATPESTLKVAR-------- 127

Query: 170 DLRERSLMVNNASPIDSMSSSNGD--LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF 227
              +R    ++A  +   S++N      +G+RGL NLG TC++N +LQ L H P L  YF
Sbjct: 128 ---KRRFSESSADELYVKSNANRRPCAKQGVRGLFNLGQTCYLNVILQTLLHDPILSTYF 184

Query: 228 LSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR-MPYSPAKFLYSWWRHASNLASYE 286
           L + H  + C     V  C+ C +   F+     D+   ++    L + WR +  LA Y+
Sbjct: 185 LGNGHQPHDCT----VADCIGCAVAEAFADFHSIDKPEGFAALNLLLASWRASPTLAGYQ 240

Query: 287 QQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTT 346
           QQDAHE++  ++D +H   E ++    +   G  C  HR F G LRS V C  CG  + T
Sbjct: 241 QQDAHEYYQFLVDKLHTSAEGNR---ENHEKGCSCFFHRTFYGKLRSSVTCDRCGNVTKT 297

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            DP VD SLD++           T  +                   TL GCL+ FT PE+
Sbjct: 298 EDPIVDLSLDVQVQAKKRAMGGGTGPS----------------ATPTLSGCLESFTSPEK 341

Query: 407 LGSDQKFFCQQC-QVRQESLKQMSIRKLPLVSCFHIK--RFEHSSVRKMSRKVDRYLQFP 463
           L +D  + C  C    Q++ KQ+ I+KLP + C  +K  RFEH+    +S KV+  + FP
Sbjct: 342 LMAD-VYNCSGCGNTPQKATKQLRIKKLPAILCMQLKKQRFEHTF--SVSEKVEGRIDFP 398

Query: 464 LSLDMAPYLS---SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHY 520
           LS++M PY +   S++ +SR+                     ++L + V H GKL+AGHY
Sbjct: 399 LSINMLPYTTNPDSAVDKSRY--------------------TYDLSSAVVHKGKLEAGHY 438

Query: 521 VTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
             Y R  ++W   +D  +T V E  V     Y++FY  + L   AS
Sbjct: 439 YVYCRQGDEWMLFNDDQVTPVTEAEVLGVDAYLLFYNLRCLANAAS 484


>gi|296084528|emb|CBI25549.3| unnamed protein product [Vitis vinifera]
          Length = 171

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 108/176 (61%), Positives = 117/176 (66%), Gaps = 42/176 (23%)

Query: 301 IHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
           +H + +  + +  + GNG+CCIAHRVFSGILRSDVMCMACGFTSTT+DPCVD SLDLEPN
Sbjct: 12  LHSRSQAWKRRMVALGNGECCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPN 71

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
           QG S K  STKS+HSCN EAD MNSSQNCG STLMGCLDRFTRPERLGSDQKFFCQQC  
Sbjct: 72  QGVSTKMGSTKSHHSCNGEADSMNSSQNCGTSTLMGCLDRFTRPERLGSDQKFFCQQC-- 129

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI 476
                                                   QFP SLDMAPYLSSSI
Sbjct: 130 ----------------------------------------QFPFSLDMAPYLSSSI 145


>gi|451855417|gb|EMD68709.1| hypothetical protein COCSADRAFT_33584 [Cochliobolus sativus ND90Pr]
          Length = 517

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 264/546 (48%), Gaps = 84/546 (15%)

Query: 23  CPHLADF--HARNGT-KPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           C H+ +   +AR  T + +RAI   +H KP          +   P        S   L+ 
Sbjct: 39  CEHMGEMFENARKQTLQHYRAILQNIHEKPSIIAQTYNATTDSKPTV------SLKPLFL 92

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C     ++   +       TK     SH  +V+     ++C  C+D +YD   +   
Sbjct: 93  CLQCP----NIMTEADRDLHFETK-----SHCFSVESRDGNVYCGNCQDFIYDEALE--- 140

Query: 140 VLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR 199
                  I++  K    +KR+  D    +    +  L+++N++ +   +        GLR
Sbjct: 141 -------ILRLQKG---KKRKYED----TTTTEDHKLVISNSTFLPCRAI-------GLR 179

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+G TCFM+ +LQ L H P +RN++LS+ H +  C+ ++    C++C LD MF    
Sbjct: 180 GLYNMGQTCFMSVILQTLVHNPFIRNFYLSEGHKQTDCEKES----CVSCALDEMFVEFH 235

Query: 260 CGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
             ++   +     L   W     LA Y+QQDAHE+   +L+ +H       +   +  + 
Sbjct: 236 SAEKTEGFGAVSMLMGSWLAGEALAGYQQQDAHEYMQFILNTLHLA-----NGGSTDDSE 290

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
           DC CI H+ F G L S V C +C   +T  DP +D SLD+        +  S K      
Sbjct: 291 DCKCIIHQTFCGKLSSTVTCDSCRNVTTAQDPYMDLSLDV--------RIQSKKRK---- 338

Query: 378 CEADGMNSSQNCGIST---LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                MN+ +  G  T   L  CL+RFT  E+LGS + + C+ C   Q + KQ+SI++LP
Sbjct: 339 -----MNAER--GEETPLDLRDCLERFTAKEKLGSAE-YTCRNCDSPQNATKQLSIKRLP 390

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF-FPFDGDES 493
            V   H+KRFEH+  +  S K++  ++FP+ LD+ PY ++     R       P     +
Sbjct: 391 PVLSIHLKRFEHT--KSTSSKIETPVRFPVKLDIYPYTAAHKAALRAAKASGIPVT---N 445

Query: 494 NTLNEPSSE--FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQG 551
             +N P++   +EL +V+ H GK+++GHY++Y R  + W+  DD+ +  V+E  V AA+ 
Sbjct: 446 YNINSPANALVYELSSVIVHKGKMESGHYISYSREGSDWFMFDDSKVVLVSEAEVLAAEA 505

Query: 552 YMMFYV 557
           Y++FY+
Sbjct: 506 YLLFYM 511


>gi|7328168|emb|CAB82415.1| hypothetical protein [Homo sapiens]
          Length = 264

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 166/278 (59%), Gaps = 16/278 (5%)

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTF 347
           DAHEF I+ LD +H   + D +  ++     C CI  ++F+G L+SDV C  C   STT 
Sbjct: 1   DAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTI 60

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
           DP  D SLDL  +       S     +  N E      S   G +TL  CL RFTRPE L
Sbjct: 61  DPFWDISLDLPGSSTPFWPLSPGSEGNVVNGE------SHVSGTTTLTDCLRRFTRPEHL 114

Query: 408 GSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLD 467
           GS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y+ FPL LD
Sbjct: 115 GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTYVSFPLELD 172

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL- 526
           M P+++SS   SR   ++       +++LN   +++ LFAVV H G L++GHY +++R  
Sbjct: 173 MTPFMASS-KESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGHYTSFIRQH 226

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
            ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 227 KDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 264


>gi|225683984|gb|EEH22268.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides
           brasiliensis Pb03]
          Length = 368

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/372 (34%), Positives = 184/372 (49%), Gaps = 52/372 (13%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            G+RGL NLG TC+MN +LQ L H P L  YFL + H  Y C  +N    C++C +   F
Sbjct: 39  EGVRGLFNLGQTCYMNVILQTLLHDPLLTTYFLGNNHLTYDCTVQN----CISCAVSEAF 94

Query: 256 SAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE---KDQHK 311
           S     ++   +S    L + WR +  L+ Y+QQDAHEF+  ++D +H       +D +K
Sbjct: 95  SEFNNDEKTEGFSALNLLLASWRSSPILSGYQQQDAHEFYQFLVDKLHAGANDHVEDHNK 154

Query: 312 PRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
                   C C  H  F G LRS V C  CG  + T D  +D SLD++  +         
Sbjct: 155 A-------CHCFFHNAFYGKLRSSVTCDKCGNVTQTEDQMIDLSLDVQVQK--------- 198

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ-VRQESLKQMS 429
                   +   +   ++    TL GCL  FT PE+L +D  + C  C    Q++ KQ+ 
Sbjct: 199 --------KKRALGGGESTTTPTLDGCLQSFTSPEKLMAD-AYNCGGCGGTPQKATKQLR 249

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           IRKLP++ C  +KRFEH+    +S KV+  + FPLS++M PY +             P+ 
Sbjct: 250 IRKLPVILCMQLKRFEHT--LSVSEKVEGKVDFPLSINMLPYTTR------------PY- 294

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAA 549
              S   N     ++L + V H GKLDAGHY  Y R   +W+  +D  +T VNE  V  A
Sbjct: 295 --SSTPANNSGYIYDLSSTVVHKGKLDAGHYYVYCRQGEQWFLFNDDQVTAVNEAEVLGA 352

Query: 550 QGYMMFYVQKML 561
             Y++FY    L
Sbjct: 353 DAYLLFYTLHAL 364


>gi|299750264|ref|XP_002911473.1| hypothetical protein CC1G_14471 [Coprinopsis cinerea okayama7#130]
 gi|298408821|gb|EFI27979.1| hypothetical protein CC1G_14471 [Coprinopsis cinerea okayama7#130]
          Length = 589

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 224/491 (45%), Gaps = 133/491 (27%)

Query: 159 RRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGNTCFMNSVLQAL 217
           + R  Y+ W+ D ++++ M                LP +  RGL NLG TCF+N+VLQ L
Sbjct: 24  KLREPYKKWTEDEKDKAAM-----------EGFTRLPCQARRGLVNLGQTCFLNAVLQCL 72

Query: 218 FHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM------------- 264
            H P LRNYFLSD+HN   C+ ++    C  C++D +F+ I+                  
Sbjct: 73  VHNPLLRNYFLSDKHNWRQCKLEH----CACCEMDKLFTEIYSIPTPPPSTNTPANSTPL 128

Query: 265 ----------------------PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
                                 P++P  FL++ ++ + +L+SY Q DAHE FIS+L+ IH
Sbjct: 129 TLSSSLNPPPLPSQHPHPTQPGPHAPHTFLHTLYKTSPDLSSYAQHDAHETFISLLNLIH 188

Query: 303 EKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
                     R   N  C C+ H VF G L+SDV C  CG T+T  DP +D SL++    
Sbjct: 189 STT-------RGSTNVSCNCVIHGVFGGQLQSDVRCERCGNTTTAIDPMLDVSLEIGRAG 241

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QV 420
           GS                  G  +++     TL GCL RFT  E+LG  +++ C +C +V
Sbjct: 242 GSK----------------GGPKAAEEL---TLAGCLRRFTTSEKLGL-KEYTCTKCNKV 281

Query: 421 RQESLKQMSIRKLPLVSCFHIK-------------------------------------R 443
             ++ K+MSIR+LP V  F  K                                     R
Sbjct: 282 TTDASKRMSIRQLPAVLSFQFKVRFIAGVIPPPPSLLFIFKFFISRPPSNHTSAPLLKQR 341

Query: 444 FEHSSVRKMS-RKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF---------FPFDGDES 493
           FE  +  K S RK+D  ++ P S++MAPY S+ +      N           F + G E+
Sbjct: 342 FEQRTNDKSSARKLDTPVRIPASINMAPYTSAVLKEMDKENSAGGGVGAGVPFIYPGPEA 401

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYM 553
                   E++LFAV+ H G++D GHY  Y R  ++WY+ DD  +T  +     ++  YM
Sbjct: 402 ------IYEYDLFAVINHEGQIDNGHYTNYARFEDEWYRFDDDKVTHSSLGQCLSSNPYM 455

Query: 554 MFYVQKMLYYK 564
            FYV++ L YK
Sbjct: 456 CFYVKRHLDYK 466


>gi|167526904|ref|XP_001747785.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773889|gb|EDQ87525.1| predicted protein [Monosiga brevicollis MX1]
          Length = 594

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 168/325 (51%), Gaps = 43/325 (13%)

Query: 246 CLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
           CLAC L  +FS  + G     S    LY+ W+ +S+LA Y QQD+HEFFIS+LDG+H+ +
Sbjct: 312 CLACVLAQLFSDAYNGQHEQMSTHTLLYAIWKASSHLAGYSQQDSHEFFISLLDGLHQHM 371

Query: 306 EKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            ++   P S  +   CI HRVF+G L+SDV C +CGF STTF+P  D SL         +
Sbjct: 372 VQEGVNPHSNAHDCDCIIHRVFTGKLQSDVSCQSCGFVSTTFEPFWDLSL--------GI 423

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
           + ++T    S                             E+LG D    C  C+ +Q++ 
Sbjct: 424 RRAATGDGQS-----------------------------EQLGEDAMVTCTNCKAKQQAH 454

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           K++++  LP+  CFH+KRF  +S      K   Y++F   LD+ PYL+ +I  ++     
Sbjct: 455 KRLTLHSLPVALCFHLKRFRQASFTAPIVKDQVYVRFSQELDLYPYLAHAIATTK----- 509

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENT 545
               G    +L + +  + LFAV+TH G +  GHY+ +++   +WY CDD  +  V+E  
Sbjct: 510 -DEQGASRPSLRDDAFTYNLFAVITHIGTMQQGHYIAHVKHGGQWYCCDDGNVFMVHERD 568

Query: 546 VRAAQGYMMFYVQKMLYYKASEKQG 570
           V   Q YM+FY++  L Y    K G
Sbjct: 569 VLQTQAYMLFYIKTRLEYGTPSKDG 593



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 7/161 (4%)

Query: 77  LYACMACAAVSCHV--PPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRD 134
           L+ C++C  + C     P+    A H+ + +   SH +++ +    ++C  C D +YD D
Sbjct: 85  LHLCLSCVFIGCFTFSQPNGEPPARHSHEHAVQASHALSLSLAHRRVYCHFCNDFIYDPD 144

Query: 135 FDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLR-ERSLMVNNASPIDSMSSSNGD 193
           F+  +    T ++++   P +     R   +PWS D+  +  L    +    ++ S+   
Sbjct: 145 FEHWI---DTHTVMEMEDP-HAADPERFAKQPWSLDINTDAGLQAAESLQARAVLSTRYT 200

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
              GLRGL NLGNTCF+NS+LQAL H P LRN+FL+D H +
Sbjct: 201 PGLGLRGLCNLGNTCFVNSILQALIHNPLLRNFFLADMHRQ 241


>gi|238487402|ref|XP_002374939.1| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus flavus
           NRRL3357]
 gi|220699818|gb|EED56157.1| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus flavus
           NRRL3357]
          Length = 393

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 212/442 (47%), Gaps = 73/442 (16%)

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN 180
           LFC  C D VYD   +           ++SS PE+  K  +   R +S    +   + +N
Sbjct: 8   LFCQGCGDFVYDYGLER----------LRSSTPESTLKLAQ--KRRFSESSTDELYVRSN 55

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
           A+             +G+RGL NLG TC++N +LQ L H P L  YFL   H  + C   
Sbjct: 56  ANKRSCA-------KQGVRGLFNLGQTCYLNVILQTLLHDPILNTYFLGSGHQSHDCTMS 108

Query: 241 NGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
           +    C+AC +   F+     D+   ++    L + WR +S LA Y+QQDAHE++  ++D
Sbjct: 109 D----CIACAVAEAFADFNSSDKAEGFAALSLLLASWRASSALAGYQQQDAHEYYQFLVD 164

Query: 300 GIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
            +H   +   H+   +G   C C  H+ F G LRS V C  CG  + T DP VD SLD++
Sbjct: 165 KLHSSTD-GHHENHEKG---CPCFFHKTFYGKLRSSVTCDKCGNVTRTDDPMVDLSLDVQ 220

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
                               +   M  +      TL GCL+ FT PE+L +   + C  C
Sbjct: 221 -----------------VQAKKRAMGGAGPSSTPTLSGCLESFTSPEKLMAG-VYNCSGC 262

Query: 419 Q-VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLS---S 474
               Q++ KQ+ I+KLP + C  +KR+EH+    +S K++  + FPLS++M PY +   S
Sbjct: 263 GGSAQKATKQLRIKKLPAILCMQLKRYEHT--FSVSEKLEGRIDFPLSINMLPYTTNPNS 320

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCD 534
            + +SR+                     ++L + V H GKLDAGHY  Y R  ++W   +
Sbjct: 321 HVDKSRY--------------------IYDLSSAVVHKGKLDAGHYYAYCRQGDEWILFN 360

Query: 535 DAWITEVNENTVRAAQGYMMFY 556
           D  +T V E  V +A  Y++FY
Sbjct: 361 DDQVTSVTEADVLSADAYLLFY 382


>gi|350630145|gb|EHA18518.1| hypothetical protein ASPNIDRAFT_176112 [Aspergillus niger ATCC
           1015]
          Length = 391

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/441 (32%), Positives = 208/441 (47%), Gaps = 71/441 (16%)

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN 180
           ++C AC D VYD   +  +  + T S +Q +K     KRR  D                +
Sbjct: 8   VYCQACGDFVYDHGLER-LRCSTTESALQVAK-----KRRFSDSSA-------------D 48

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
              I S +S      +G+RGL NLG TC++N +LQ L H P L  YFL + H  + C + 
Sbjct: 49  ELYIRSNASKRPCAKQGVRGLFNLGQTCYLNVILQTLLHDPILNTYFLGNGHQPHDCTAS 108

Query: 241 NGVRLCLACDLDTMFSAIFCGDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
           +    C+ C +   F+     D+   ++    L + WR +S LA Y+QQDAHE++  ++D
Sbjct: 109 D----CVGCAVAEAFADFNSSDKPEGFAALNLLLASWRASSTLAGYQQQDAHEYYQFLVD 164

Query: 300 GIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
            +H   E  +        G  C  H+ F G LRS V C  CG  + T DP VD SLD++ 
Sbjct: 165 KLHLSTENHR---EGHEKGCPCFFHKTFYGKLRSSVTCDKCGNVTRTDDPMVDLSLDVQ- 220

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC- 418
                              +   M  +      TL GCL+ +T PE+L +   + C  C 
Sbjct: 221 ----------------VQAKKRAMGGTGVPSTPTLSGCLESYTSPEKLMAG-VYNCSHCG 263

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS---S 475
              Q++ KQ+ IRKLP + C  +KRFEH+    +S K++  + FPLS++M PY +S    
Sbjct: 264 GTPQKATKQLRIRKLPAILCMQLKRFEHTF--SVSEKLEGKIDFPLSINMLPYTTSPQAK 321

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDD 535
           + RSRF                     ++L + V H GKLDAGHY  Y R  + W   +D
Sbjct: 322 VDRSRF--------------------VYDLSSAVVHQGKLDAGHYYVYCRQGDDWVLFND 361

Query: 536 AWITEVNENTVRAAQGYMMFY 556
             +T V E  V  A  Y++FY
Sbjct: 362 DKVTAVTEAEVLNADAYLLFY 382


>gi|115389962|ref|XP_001212486.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194882|gb|EAU36582.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 392

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 211/448 (47%), Gaps = 85/448 (18%)

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPEN---LRKRRRIDYRPWSPDLRERSLM 177
           LFC  C D VYD          H    ++SS  E+   L K+RR                
Sbjct: 8   LFCQGCGDFVYD----------HGLERLRSSTSESALKLAKKRRF--------------- 42

Query: 178 VNNASPIDSMSSSNGD----LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHN 233
            + +S  D    SN +      +G+RGL NLG TC++N +LQ L H P L  YFL + H 
Sbjct: 43  -SESSHDDVYIRSNANRRPCAKQGVRGLFNLGQTCYLNVILQTLLHDPLLNTYFLGNGHQ 101

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHE 292
           ++ C     V+ C+ C +   F+     D+   ++    L + WR +  LA Y+QQDAHE
Sbjct: 102 QHDCT----VQDCIGCAVSEAFADFNSSDKAEGFAALSLLLASWRASPTLAGYQQQDAHE 157

Query: 293 FFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVD 352
           ++  ++D +H     D+H+  S      C  H+ F G LRS V C  CG  + T DP +D
Sbjct: 158 YYQFLVDKLH--ASTDEHE-ESHDKSCPCFFHKTFYGKLRSSVTCDKCGNVTRTDDPMID 214

Query: 353 FSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQK 412
            SLD++                    +   M S       TL GCLD FT  ERL +   
Sbjct: 215 LSLDVQ-----------------VQAKKRAMGSGGPSAPPTLSGCLDSFTSSERLMAG-V 256

Query: 413 FFCQQCQ-VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPY 471
           + C  C    Q++ KQ+ I+KLP + C  +KR+EH+    +S K++  + FPLS++M PY
Sbjct: 257 YNCSGCGGTPQKATKQLRIKKLPAILCMQLKRYEHTF--SVSEKLEGRIDFPLSINMLPY 314

Query: 472 LS---SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN 528
            +   S++ +SR+                     ++L + V H GKLDAGHY  Y R  +
Sbjct: 315 TTNPHSNVDKSRY--------------------IYDLSSAVVHKGKLDAGHYYVYCRQGD 354

Query: 529 KWYKCDDAWITEVNENTVRAAQGYMMFY 556
           +W   +D  +T V E  V  A  Y++FY
Sbjct: 355 QWMLFNDDQVTAVTEAEVLNADAYLLFY 382


>gi|452004461|gb|EMD96917.1| hypothetical protein COCHEDRAFT_1199740 [Cochliobolus
           heterostrophus C5]
          Length = 519

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 231/456 (50%), Gaps = 62/456 (13%)

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           SH  +V+     ++C  C+D +YD   +          I++  K    +KR+  D    +
Sbjct: 113 SHCFSVESRDGNVYCGNCQDFIYDEALE----------ILRLQKG---KKRKYED----T 155

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
               +  L+++N++ +   +        GLRGL N+G TCFM+ +LQ L H P +RN++L
Sbjct: 156 TTTEDHKLVISNSTFLPCRAI-------GLRGLYNMGQTCFMSVILQTLVHNPFIRNFYL 208

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQ 287
           S+ H +  C+ ++    C++C LD MF      ++   +     L   W     LA Y+Q
Sbjct: 209 SEGHKQTDCEKES----CVSCALDEMFVEFHSAEKTEGFGAVSMLMGSWLAGEALAGYQQ 264

Query: 288 QDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTT 346
           QDAHE+   +L+ +H       +   +  + DC CI H+ F G L S V C +C   +T 
Sbjct: 265 QDAHEYMQFILNTLHLA-----NGGSTDDSEDCKCIIHQTFCGKLSSTVTCDSCRNVTTA 319

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            DP +D SLD+   Q    K ++ K   +                  L  CL+RFT  E+
Sbjct: 320 QDPYMDLSLDVRI-QSKKRKMNAEKGEET---------------PLDLRDCLERFTAKEK 363

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK--RFEHSSVRKMSRKVDRYLQFPL 464
           LGS + + C+ C   Q + KQ+SI++LP V   H+K  RFEH+  +  S K++  ++FP+
Sbjct: 364 LGSAE-YTCRNCDSPQNATKQLSIKRLPPVLSIHLKFQRFEHT--KSTSSKIETPVRFPV 420

Query: 465 SLDMAPYLSSSILRSRFGNRF-FPFDGDESNTLNEPSSE--FELFAVVTHTGKLDAGHYV 521
            LD+ PY ++     R       P     +  +N P++   +EL +V+ H GK+D+GHY+
Sbjct: 421 KLDIYPYTAAHKAALRAAKASGIPVT---NYNINSPANALVYELSSVIVHKGKMDSGHYI 477

Query: 522 TYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           +Y R  + W+  DD+ +  V+E  V AA+ Y++FY+
Sbjct: 478 SYSREGSDWFMFDDSKVVLVSEAEVLAAEAYLLFYM 513


>gi|119472760|ref|XP_001258413.1| ubiquitin C-terminal hydrolase Ubp8, putative [Neosartorya fischeri
           NRRL 181]
 gi|119406565|gb|EAW16516.1| ubiquitin C-terminal hydrolase Ubp8, putative [Neosartorya fischeri
           NRRL 181]
          Length = 499

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 219/488 (44%), Gaps = 86/488 (17%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+ V        +   +H  +T     H+  ++     LFC  C D VYD D + 
Sbjct: 79  YTCLTCSEVCA-----PADRPVHTKETG----HQFYMESRGRTLFCQGCGDFVYDHDLER 129

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
              L +   + Q++           D             + NNA+             +G
Sbjct: 130 LRSLPY--GMHQAASRRRRSSESSSD----------EQFVRNNAN-------KRACAKKG 170

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           +RGL NLG TC++N +LQ L H P L  YFL + H  + C  ++    C+ C +   F+ 
Sbjct: 171 VRGLYNLGQTCYLNVILQTLLHDPILNAYFLGNGHQSHDCTLQD----CIGCAVAEAFAD 226

Query: 258 IFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK--DQHKPRS 314
               D+   ++    L + WR +  LA Y QQDAHE++  ++D +H   E   D H    
Sbjct: 227 FNSSDKAEGFAALNLLLASWRASPTLAGYHQQDAHEYYQFLVDKLHTSTEGHVDDHD--- 283

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN-----QGSSMKTSS 369
              G  C  H+ F G L+S VMC  CG  + T DP +D SLD++        G  +  S+
Sbjct: 284 --QGCSCFFHQTFYGKLKSSVMCDNCGNITKTEDPMLDLSLDVQVQAKKRAMGGGVGPSA 341

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQM 428
           T                      TL GCL+ FT PERL +   + C +C    Q++ K++
Sbjct: 342 T---------------------PTLNGCLESFTSPERLMAG-VYNCSECGGTPQKATKRL 379

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            I+KLP + C  +KRFEHSS   +S KV+  + FPLS++M PY +               
Sbjct: 380 RIKKLPAILCMQLKRFEHSSA--VSEKVEGRVDFPLSINMLPYTTHR------------- 424

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
               S  L++    ++L + V H GKLDAGHY  Y +  ++W   +D  +T   E  V  
Sbjct: 425 ---HSEDLDKSKFVYDLSSAVVHKGKLDAGHYYVYCKQGDQWVLFNDDQVTAATEAEVLN 481

Query: 549 AQGYMMFY 556
              Y++FY
Sbjct: 482 VDAYLLFY 489


>gi|358371346|dbj|GAA87954.1| ubiquitin C-terminal hydrolase Ubp8 [Aspergillus kawachii IFO 4308]
          Length = 489

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 181/366 (49%), Gaps = 52/366 (14%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+RGL NLG TC++N +LQ L H P L  YFL + H  + C + +    C+ C +   F
Sbjct: 161 QGVRGLFNLGQTCYLNVILQTLLHDPILNTYFLGNGHQPHDCTASD----CVGCAVAEAF 216

Query: 256 SAIFCGDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
           +     D+   ++    L + WR +S LA Y+QQDAHE++  ++D +H   E  +     
Sbjct: 217 ADFNSSDKPEGFAALNLLLASWRASSTLAGYQQQDAHEYYQFLVDKLHLSTENHR---EG 273

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
              G  C  H+ F G LRS V C  CG  + T DP VD SLD++                
Sbjct: 274 HEKGCPCFFHKTFYGKLRSSVTCDKCGNVTRTDDPMVDLSLDVQ---------------- 317

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKL 433
               +   M  +      TL GCL+ +T PE+L +   + C  C    Q++ KQ+ IRKL
Sbjct: 318 -VQAKKRAMGGTGVSSTPTLSGCLESYTSPEKLMAG-VYNCSHCGGTPQKATKQLRIRKL 375

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLS---SSILRSRFGNRFFPFDG 490
           P + C  +KRFEH+    +S K++  + FPLS++M PY +   + + RSRF         
Sbjct: 376 PAILCMQLKRFEHTF--SVSEKLEGKIDFPLSINMLPYTTCPQAKVDRSRF--------- 424

Query: 491 DESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ 550
                       ++L + V H GKLDAGHY  Y R  + W   +D  +T V E  V  A 
Sbjct: 425 -----------VYDLSSAVVHQGKLDAGHYYVYCRQGDDWVLFNDDKVTAVTEAEVLNAD 473

Query: 551 GYMMFY 556
            Y++FY
Sbjct: 474 AYLLFY 479


>gi|425768473|gb|EKV06994.1| Ubiquitin Carboxy-terminal hydrolase Ubp8, putative [Penicillium
           digitatum PHI26]
 gi|425775810|gb|EKV14061.1| Ubiquitin Carboxy-terminal hydrolase Ubp8, putative [Penicillium
           digitatum Pd1]
          Length = 399

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 201/440 (45%), Gaps = 67/440 (15%)

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRP-WSPDLRERSLMVN 179
           +FC  C D +YD   D            +   P    K   ID R  W+ D      + N
Sbjct: 11  VFCEKCVDFIYDHTLD------------RLRGPSG--KFEAIDGRSIWAEDSASEVYVKN 56

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
           NA         N    RG RG+ N+G TC+ +S+LQAL H P L  YFL   H+ + C+ 
Sbjct: 57  NAHK-------NPCTIRGARGVWNMGQTCYQSSILQALLHDPSLTAYFLGGGHDVHTCRI 109

Query: 240 KNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
           K+    CLAC    +F      D+    S A  L+  W+ +  +  Y QQDAHE+F  ++
Sbjct: 110 KD----CLACATAEVFMEFNSADKTEAVSAAVLLHHGWQKSKEMRGYRQQDAHEYFQFLV 165

Query: 299 DGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
           + +H              N   C  H++F G LRS VMC  CG T+ T DP  D SLD++
Sbjct: 166 NELHSSTPGHVESYDKPCN---CFFHQMFYGELRSSVMCHKCGQTTNTHDPIADLSLDVQ 222

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
                     ST S                    TL+GCLD FT  E L +D  + C++C
Sbjct: 223 LQHKKRKLGRSTSST-----------------TGTLLGCLDSFTAAEDLHADAAYHCEKC 265

Query: 419 -QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
               Q + K++ IRKLP++ C  +KR+EHSS    S K++ ++ FPLS++M PY      
Sbjct: 266 GNTPQRASKRLQIRKLPVMLCMQLKRYEHSS--NSSEKMNGHIDFPLSVNMLPYTV---- 319

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN-KWYKCDDA 536
                 R      D SN +      ++L  V+ H G +D+GHY  Y R+ N KW   DD 
Sbjct: 320 ------RKDTIPVDMSNYM------YDLSTVIVHQGTMDSGHYYAYSRIDNDKWVLTDDN 367

Query: 537 WITEVNENTVRAAQGYMMFY 556
            +T      V     Y++FY
Sbjct: 368 KVTIAGVAEVLRQDAYLLFY 387


>gi|367047331|ref|XP_003654045.1| ubiquitin carboxyl-terminal hydrolase-like protein [Thielavia
           terrestris NRRL 8126]
 gi|347001308|gb|AEO67709.1| ubiquitin carboxyl-terminal hydrolase-like protein [Thielavia
           terrestris NRRL 8126]
          Length = 520

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 221/461 (47%), Gaps = 53/461 (11%)

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           SH   V+     L+C  C D V+D  F+   +    T    ++     RKR+  +    +
Sbjct: 104 SHRFYVESRSGALYCQMCDDIVWDPTFEDLRIRKMGTGTFSTT-----RKRKHEELFEAA 158

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
             +R+      N + I + +++      GLRG+ N G TC+ N VLQ+  H P LRN++L
Sbjct: 159 DPVRD------NPTYISANTTAASCKANGLRGIYNAGATCYQNVVLQSFIHNPILRNFYL 212

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLA 283
           SD H    C + +    CL+C +D MF   +  +    Y+ A  L  +W    +   NL 
Sbjct: 213 SDGHQSSNCDTPH----CLSCAMDDMFQDFYALENTNGYTAANILSGFWISEKKAFENLV 268

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGF 342
           + ++QDAHEFF  + + +HE+   D  KP +     C CI H+ + G L+S   C  CG 
Sbjct: 269 TTKEQDAHEFFQFLAEELHER-NGDGKKPETGSEHSCNCIIHQTYYGKLQSTTTCQNCGG 327

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            +      +D SL LE         S  KS  +         S  N G+ TL  CLD   
Sbjct: 328 VTNQVQSFLDLSLPLE-------NLSQKKSKKA--------PSRPNGGVLTLQECLDE-- 370

Query: 403 RPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KMSRKVDRYL 460
             E + SD+ ++ C  C   Q++ +Q SI++LP V    +KRFE    R + + K+D  +
Sbjct: 371 --EYVKSDKCEYRCNNCNSMQQARRQTSIKRLPNVLAIQLKRFEFKQGRNERAAKIDTPV 428

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHY 520
           QFPL L+M PY           NR       + N     S  ++L +VV H G++D GHY
Sbjct: 429 QFPLQLNMLPYT----------NRARSAPESKENYELARSCTYDLLSVVVHVGEIDTGHY 478

Query: 521 VTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           ++Y R+ ++W+  +D  +    ++ V  +Q Y++FY+ + L
Sbjct: 479 LSYCRVGDQWFAFNDHKVELAQKSDVLNSQAYLLFYIVRSL 519


>gi|146324510|ref|XP_751149.2| ubiquitin C-terminal hydrolase Ubp8 [Aspergillus fumigatus Af293]
 gi|129557282|gb|EAL89111.2| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus
           fumigatus Af293]
 gi|159124720|gb|EDP49838.1| ubiquitin C-terminal hydrolase Ubp8, putative [Aspergillus
           fumigatus A1163]
          Length = 499

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 220/488 (45%), Gaps = 86/488 (17%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+ V C      +H        +    H+  ++     LFC  C D VYD D + 
Sbjct: 79  YTCLTCSEV-CAPADRPAH--------TKETGHQFYMESRGRILFCQGCGDFVYDHDLER 129

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
              L +   + Q++           D             + NNA+             +G
Sbjct: 130 LRSLPY--GMHQAASRRRRSSESSSD----------EQFVRNNAN-------KRACAKQG 170

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           +RGL NLG TC++N +LQ L H P L  YFL + H  + C  ++    C+ C +   F+ 
Sbjct: 171 VRGLYNLGQTCYLNVILQTLLHDPILNAYFLGNGHQSHDCTLQD----CIGCAVAEAFAD 226

Query: 258 IFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK--DQHKPRS 314
               D+   ++    L + WR +  LA Y QQDAHE++  ++D +H   E   D H    
Sbjct: 227 FNSSDKAEGFAALNLLLASWRASPTLAGYHQQDAHEYYQFLVDKLHTSTEGHVDDHD--- 283

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN-----QGSSMKTSS 369
              G  C  H+ F G L+S VMC  CG  + T DP +D SLD++        G  +  S+
Sbjct: 284 --QGCSCFFHQTFYGKLKSSVMCDNCGNITKTEDPMLDLSLDVQVQAKKRAMGGGVGPSA 341

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQM 428
           T                      TL GCL+ FT PERL +   + C +C    Q++ K++
Sbjct: 342 T---------------------PTLNGCLESFTSPERLMAG-VYNCSECGGTPQKATKRL 379

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            I+KLP + C  +KRFEHSS   +S KV+  + FPLS++M PY +    R R        
Sbjct: 380 RIKKLPAILCMQLKRFEHSSA--VSEKVEGRVDFPLSINMLPYTTH---RHR-------- 426

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
                  L++    ++L + V H GKLDAGHY  Y +  ++W   +D  +T   E  V  
Sbjct: 427 -----EDLDKSKFVYDLSSAVVHKGKLDAGHYYVYCKQGDQWVLFNDDQVTAATEAEVLN 481

Query: 549 AQGYMMFY 556
           A  Y++FY
Sbjct: 482 ADAYLLFY 489


>gi|429849744|gb|ELA25091.1| ubiquitin carboxyl-terminal hydrolase 2 [Colletotrichum
           gloeosporioides Nara gc5]
          Length = 506

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 226/495 (45%), Gaps = 74/495 (14%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+ +             H TK      H   VD     L+C  C D V+D   + 
Sbjct: 74  YLCLQCSTIVT-----EDDRLKHGTKKQ----HRFYVDSRSGALYCQICDDLVWDPTLEE 124

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
             V    T    +      RKR+  +   +S  +++  L ++  +   S  ++      G
Sbjct: 125 LRVRKMGTGTFSN------RKRKHDEM--FSDSIKDNPLYISTNTTTASCKAN------G 170

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRG+ N G TC+ N VLQ+  H P LRN++LSD H    CQ  N    CL+C +D MF  
Sbjct: 171 LRGIYNAGATCYQNVVLQSFLHNPMLRNFYLSDGHQSNDCQLTN----CLSCAMDDMFQD 226

Query: 258 IFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +  +    ++ A  L  +W    +   NL + ++QDAHEFF  + + +HE+   D  KP
Sbjct: 227 FYAVENTNGFTAASILSGFWISEKKAFENLVTTKEQDAHEFFQFLAEELHER-NGDGKKP 285

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
            +     C CI H+ F G L+S   C  CG  +      +D SL LE             
Sbjct: 286 ETGSEHTCNCIIHQTFYGKLQSSTTCQNCGGVTNAVQSFLDLSLGLE------------- 332

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSI 430
                N         Q     TL  CLD     E +  D+ ++ C  C   Q++ +  SI
Sbjct: 333 -----NLAHKRKKGGQKIPSLTLQECLDE----EYVKYDKCEYRCHNCNGMQQARRNTSI 383

Query: 431 RKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++LP V    +KRFE+   R  +   K+D  + FPL L+M PY S    R R        
Sbjct: 384 KRLPNVLAIQLKRFEYKQGRHDRAPSKIDTVVNFPLQLNMLPYTS----RGR-------- 431

Query: 489 DGDESNTLNE--PSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
            G E+   +E   S  ++L +VV H G++D GHYV+Y R+ ++W+K +D  +   +++ V
Sbjct: 432 -GTEAKDAHELGRSCTYDLLSVVVHVGEIDTGHYVSYCRVGDQWFKFNDHKVEMASKSDV 490

Query: 547 RAAQGYMMFYVQKML 561
            +AQ Y++FY+ + L
Sbjct: 491 LSAQPYLLFYIIRSL 505


>gi|336467423|gb|EGO55587.1| hypothetical protein NEUTE1DRAFT_131302 [Neurospora tetrasperma
           FGSC 2508]
 gi|350287934|gb|EGZ69170.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
          Length = 522

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 230/470 (48%), Gaps = 52/470 (11%)

Query: 102 TKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF-DAAVVLAHTTSIIQSSKPENLRKRR 160
           TK  +  SH   V+     L+C  C D V+D  F D  +    T S   S        R+
Sbjct: 94  TKHGNKKSHRFYVESRSGALYCQMCDDIVWDPTFEDLRLKKLGTGSFFGS--------RK 145

Query: 161 RIDYRPWSPD-LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
           R     ++PD +++    ++  + + +  ++      GLRG+ N G TC+ N VLQ+  H
Sbjct: 146 RKHEELFAPDPVKDAPQYISTNTTLATCKAN------GLRGIYNAGATCYQNVVLQSFLH 199

Query: 220 TPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW-- 276
            P LRN++LSD H    C + +    CL+C +D MF   +  +    Y+ A  L  +W  
Sbjct: 200 NPILRNFYLSDGHQSGSCDTPH----CLSCAMDDMFQEFYASETTNGYTAANILSGFWIS 255

Query: 277 --RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRS 333
             +   NL + ++QDAHEFF  M + +HE+   D  +P       C CI H+ + G L++
Sbjct: 256 ENKAFENLVANKEQDAHEFFQFMAEELHER-NGDGKRPEIGSEHTCNCIIHQTYYGKLQT 314

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
              C  CG  +      +D S+ LE     ++     K N S     DG+ S++     T
Sbjct: 315 STTCQNCGGVTNQAQSFLDLSVPLE-----NLTQKRGKKNLS---NGDGVASTRTQNSVT 366

Query: 394 LMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRK- 451
           L  CLD     E + SD+ ++ CQ C   Q++ +Q SI+KLP V    +KRFE    R  
Sbjct: 367 LQECLDE----EYIKSDKCEYRCQNCNSVQQARRQTSIKKLPNVLSIQLKRFEFKQGRND 422

Query: 452 MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTH 511
            ++K++  +QFPL L+M PY +    R+R  +        + N   + S  ++L  VV H
Sbjct: 423 RAQKIETPVQFPLQLNMLPYTT----RARTQDL-------KDNYELQRSCTYDLLCVVVH 471

Query: 512 TGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            G +D GHY++Y R+ ++W+  +D  +    ++ V  A+ Y++FY+ + L
Sbjct: 472 VGDMDTGHYISYCRVGDQWFAFNDHKVELAQKSDVLNAKAYLLFYIVRSL 521


>gi|310795028|gb|EFQ30489.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
           M1.001]
          Length = 518

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 226/493 (45%), Gaps = 66/493 (13%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+ +      +      H TK      H   VD     L+C  C D V+D   + 
Sbjct: 82  YLCLQCSTIV-----NDEDRLKHGTKKQ----HRFYVDSRSGALYCQICDDLVWDPTLEE 132

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
             V    T    S      RKR+  +   +S  +++ +   NN   I + +++      G
Sbjct: 133 LRVRKMGTGTFSS------RKRKHDEM--FSDGVKDSA--ANNPGFISNNTTTASCKANG 182

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRG+ N G TC+ N VLQ+  H P LRN++LSD H    C   N    CL+C +D MF  
Sbjct: 183 LRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHQSTDCSLTN----CLSCAMDDMFQD 238

Query: 258 IFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +  +    ++ A  L  +W    +   NL + ++QDAHEFF  + + +HE+   D  +P
Sbjct: 239 FYAVENTNGFTAASILSGFWISEKKAFENLVTTKEQDAHEFFQFLAEELHER-NGDGKRP 297

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
            +     C CI H+ F G L+S   C  CG  +      +D SL LE             
Sbjct: 298 ETGSEHTCNCIIHQTFYGKLQSSTTCQNCGGVTNAVQSFLDLSLGLE------------- 344

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSI 430
                N               TL  CLD     E + SD+ ++ C  C   Q++ +  SI
Sbjct: 345 -----NLSHKRKKGGPKVPSLTLQECLDE----EYVKSDKCEYRCHNCSSMQQAKRATSI 395

Query: 431 RKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++LP V    +KRFE+   R  +   K+D  + FPL L+M PY +    R R  +    F
Sbjct: 396 KRLPNVLAIQLKRFEYKQGRHDRAPSKIDTIVNFPLQLNMLPYTT----RGRGADSKDAF 451

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
           +   S T       ++L +VV H G++D GHYV+Y R+ ++W+K +D  +   +++ V +
Sbjct: 452 ELGRSCT-------YDLLSVVVHVGEIDTGHYVSYCRVGDQWFKFNDHKVEMASKSEVLS 504

Query: 549 AQGYMMFYVQKML 561
           AQ Y++FY+ + L
Sbjct: 505 AQPYLLFYIIRSL 517


>gi|339237837|ref|XP_003380473.1| ubiquitin carboxyl- hydrolase 22 [Trichinella spiralis]
 gi|316976664|gb|EFV59911.1| ubiquitin carboxyl- hydrolase 22 [Trichinella spiralis]
          Length = 954

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 227/489 (46%), Gaps = 84/489 (17%)

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
           ++AC+ CA V C     ++H   H+ +      H   V++    +FC  C+  + D   +
Sbjct: 108 IFACIDCATVGC---LKNNHFEEHSKEKE----HVFGVNIITGHVFCFRCQSIISDAKLN 160

Query: 137 AAVVLAHT-TSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
           + +   +     I    P +  K          P LR + L VN  S +           
Sbjct: 161 SIICKVNCRYRQIYGLNPVSYEKVTDDPPAELVPYLRAKRL-VNPPSLL----------- 208

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            G+RGL NLGNTCF N+VLQ   HT  ++ YFLSD      C    G  LCL C++ T+ 
Sbjct: 209 -GVRGLLNLGNTCFFNTVLQVFLHTARVQEYFLSD------CHPPCGKPLCLICEIGTVM 261

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
                 +R P +PA+ L S W+ A  +A  EQQDAHE ++++++GIH+  +      +  
Sbjct: 262 QERLFVERPPIAPARLLASLWKAAPEIAYAEQQDAHEVYLALMNGIHQSSDG-----KDF 316

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
           G    CIAH+VFS   + DV C+ C   ++  +PC + S+D+                  
Sbjct: 317 GEVCSCIAHKVFSARHKCDVFCICCHRVTSKVEPCFNISVDI------------------ 358

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                  ++S++  G+S LM CLDRFT  E+L      +C  C       KQ++    P 
Sbjct: 359 -------LDSAE--GVS-LMKCLDRFTDAEKLILHA--YCCYCGCECAIWKQVTFLDFPN 406

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V CFH+KR E S  R   +KV  ++ FP  LD+ PY         + NR    D      
Sbjct: 407 VVCFHVKRTEKS--RHRFQKVKTWMHFPEILDLMPY---------YRNRLKEIDPTVDLP 455

Query: 496 LNEP----------SSEFELFAVVTHTGKLDAGHYVTYLRLSN-KWYKCDDAWITEVNEN 544
           L E            +++ L+AV+ H G+ + GH+  +LR ++ +WY CDD  IT   ++
Sbjct: 456 LIEECPWLKLLATVENQYVLYAVINHAGQTETGHFTCFLRPNDGQWYHCDDNVITPATDS 515

Query: 545 TVRAAQGYM 553
            V  ++ Y+
Sbjct: 516 EVYDSEAYI 524


>gi|302408293|ref|XP_003001981.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
           VaMs.102]
 gi|261358902|gb|EEY21330.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
           VaMs.102]
          Length = 519

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 227/494 (45%), Gaps = 67/494 (13%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+++             H  K      H   VD     L+C  C D V+D   + 
Sbjct: 82  YLCLQCSSIVSE-----EERLKHGNKKQ----HRFYVDSRSGTLYCQICDDLVWDPTLED 132

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
             V    T    +  P+  RK   +    ++  L++  L ++  + I S  ++      G
Sbjct: 133 LRVRKMGTGTFSTLLPDRKRKHDEL----FAESLKDNPLYISTNTTIASCKAN------G 182

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRG+ N G TC+ N VLQ+  H P LRN++LSD H    C   N    CL+C +D MF  
Sbjct: 183 LRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHQSTDCSLSN----CLSCAMDDMFQD 238

Query: 258 IFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +  +    ++ A  L  +W    +   NL + ++QDAHEFF  + + +HE+   D   P
Sbjct: 239 FYAVENTNGFTAASILSGFWISEKKAFENLVTTKEQDAHEFFQFLAEELHER-NGDGKPP 297

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP-NQGSSMKTSST 370
                  C CI H+ F G L+S   C  CG  +      +D SL L+   Q  + KT   
Sbjct: 298 EIGSEHSCNCIIHQTFYGKLQSTTTCQNCGGVTNAVQSFLDLSLGLDNLAQRRARKTGQK 357

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMS 429
           + +                   TL  CLD     E + SD+ ++ C  C   Q++ +  S
Sbjct: 358 QPS------------------LTLQECLDE----EYVKSDKCEYRCHNCDSTQQARRNTS 395

Query: 430 IRKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           I++LP V    +KRFE    R  +   K+D  + FPL L+M PY           NR   
Sbjct: 396 IKRLPNVLAIQLKRFEFKQGRHDRAPSKIDTTVNFPLQLNMLPYT----------NRAKG 445

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
            D  ES  L   S  ++L +VV H G++D GHYV+Y R++++W+K +D  +   +++ V 
Sbjct: 446 SDTKESFELAR-SCTYDLLSVVVHVGEIDTGHYVSYCRVADQWFKFNDHKVEMASKSDVL 504

Query: 548 AAQGYMMFYVQKML 561
           +AQ Y++FY+ + L
Sbjct: 505 SAQPYLLFYIIRSL 518


>gi|164427066|ref|XP_959796.2| hypothetical protein NCU02375 [Neurospora crassa OR74A]
 gi|157071591|gb|EAA30560.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 522

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 230/470 (48%), Gaps = 52/470 (11%)

Query: 102 TKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF-DAAVVLAHTTSIIQSSKPENLRKRR 160
           TK  +  SH   V+     ++C  C D V+D  F D  +    T S   S        R+
Sbjct: 94  TKHGNKKSHRFYVESRSGAVYCQMCDDIVWDPTFEDLRLKKLGTGSFFGS--------RK 145

Query: 161 RIDYRPWSPD-LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
           R     ++PD +++    ++  + + +  ++      GLRG+ N G TC+ N VLQ+  H
Sbjct: 146 RKHEELFAPDPVKDAPQYISTNTTLATCKAN------GLRGIYNAGATCYQNVVLQSFLH 199

Query: 220 TPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW-- 276
            P LRN++LSD H    C + +    CL+C +D MF   +  +    Y+ A  L  +W  
Sbjct: 200 NPILRNFYLSDGHQSGSCDTPH----CLSCAMDDMFQEFYASETTNGYTAANILSGFWIS 255

Query: 277 --RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRS 333
             +   NL + ++QDAHEFF  M + +HE+   D  +P       C CI H+ + G L++
Sbjct: 256 ENKAFENLVANKEQDAHEFFQFMAEELHER-NGDGKRPEIGSEHTCNCIIHQTYYGKLQT 314

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
              C  CG  +      +D S+ LE     ++     K N +     DG+ S++     T
Sbjct: 315 STTCQNCGGVTNQAQSFLDLSVPLE-----NLTQKRGKKNLT---NGDGVASTRTQNSVT 366

Query: 394 LMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRK- 451
           L  CLD     E + SD+ ++ CQ C   Q++ +Q SI+KLP V    +KRFE    R  
Sbjct: 367 LQECLDE----EYIKSDKCEYRCQNCNSVQQARRQTSIKKLPNVLSIQLKRFEFKQGRND 422

Query: 452 MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTH 511
            ++K++  +QFPL L+M PY +    R+R  +        + N   + S  ++L  VV H
Sbjct: 423 RAQKIETPVQFPLQLNMLPYTT----RARTQDL-------KDNYELQRSCTYDLLCVVVH 471

Query: 512 TGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            G +D GHY++Y R+ ++W+  +D  +    ++ V  A+ Y++FY+ + L
Sbjct: 472 VGDMDTGHYISYCRVGDQWFAFNDHKVELAQKSDVLNAKAYLLFYIVRSL 521


>gi|50294832|ref|XP_449827.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529141|emb|CAG62807.1| unnamed protein product [Candida glabrata]
          Length = 461

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 237/556 (42%), Gaps = 131/556 (23%)

Query: 41  IQDCLHIKP----PGGRAA----------------IRRDSSEVPRCGVCGDSSCPRLYAC 80
           + DC HI+     P  RAA                I+       RC  C + S    + C
Sbjct: 1   MDDCQHIQSIFENPKNRAAWLNALSTTQSVLRHSPIKAKLLHAFRCSTCKEISNGSNFLC 60

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C    C    + SH   H+ +T     H   ++     +FC  C D V D D      
Sbjct: 61  LQCGFCGCW---NGSHFEQHSKETG----HLFGINAQTELVFCFQCMDYVGDFDLFRDAA 113

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
           LA                  R DY        E    V     ID           G+ G
Sbjct: 114 LA-----------------NRWDYY-------EEYTNVPTVDQID-----------GMAG 138

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L N+G+TC+M+S++Q + H P +  YF+  +H+   C  K     C +C + ++  A F 
Sbjct: 139 LVNMGSTCYMSSIMQCIIHNPYMIRYFMCQQHSNN-CTLKMASN-CTSCAISSII-ADFY 195

Query: 261 GDRMPYSPA-------------KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
           G+ +                    L   W+   NLA Y QQDAHE++  +L+ IH+  + 
Sbjct: 196 GNSVQNDYKSKKNNNNKHEGFINLLTCSWKVNENLAGYSQQDAHEYWQFILNHIHQDYKS 255

Query: 308 DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSMK 366
             H   S      C+ H  F G L+S ++C  C   S TTFDP +D SL +         
Sbjct: 256 SMH-SHSDDKLCNCVVHSSFQGSLKSSIVCPECNNDSKTTFDPFIDLSLGI--------- 305

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
               K  H                  TL  CLD F + E+L  D  FFC++CQ +Q  +K
Sbjct: 306 ----KDKH------------------TLTECLDNFHKKEQL-HDYDFFCKKCQAQQNPIK 342

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           Q +I KLP V    +KRFEH  +  +++K++ Y++FP  LDM PYL              
Sbjct: 343 QFTINKLPPVLVLQLKRFEH-LMSGVNQKLNDYIEFPKILDMKPYLK------------- 388

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN-KWYKCDDAWITEVNENT 545
               D  N   +PS  +EL  +++HTG ++ GHYV + ++ N +W+K +D+ +T++ E  
Sbjct: 389 ----DNQNPDEDPSILYELIGIISHTGSVNEGHYVAFCKIENGEWFKFNDSMVTKILEKD 444

Query: 546 VRAAQGYMMFYVQKML 561
           V   Q Y++FY+ K +
Sbjct: 445 VLKEQAYLLFYIVKHI 460


>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
           rubripes]
          Length = 612

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 155/553 (28%), Positives = 247/553 (44%), Gaps = 106/553 (19%)

Query: 59  DSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPH---SSHVAIHAT 102
           DSS  P        C VC  +  P  + C+ C  V C      H   H   +  V +   
Sbjct: 15  DSSRFPNGTPSSWCCSVCRSNKSP--WICLTCLMVHCGRYVNGHAKKHFEETQAVGVSQR 72

Query: 103 KT----SSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSSKPENL 156
           K+         H + +D     +FC  C D V +      V  V  H  S+   +   + 
Sbjct: 73  KSDKQDKEKYHHSVCMDCSSYSVFCYRCDDFVVNDTKLGQVQKVREHLQSLENFALMGDR 132

Query: 157 RKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQA 216
           +++R+           + SL  ++      +   N  +  G  GL NLGNTCFMN++LQ+
Sbjct: 133 QRKRKF----------QESLSADS-----KLMKDNDGIAVGATGLRNLGNTCFMNAILQS 177

Query: 217 LFHTPPLRNYF-----LSDRHNR------YYCQSKNGVRLCLACDLDTMFSAIFCGDRMP 265
           L +      YF     +S R  +      Y+ +S+    + L  +      +++ G +  
Sbjct: 178 LSNIEQFSCYFKELPAVSLRSGKTAGRRMYHTRSQGDSSVSLVEEFRKTLCSLWQGSQTA 237

Query: 266 YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR-----------S 314
           +SP    Y+ W+   +   Y+QQDAHEF   +LD +H +++  ++              S
Sbjct: 238 FSPDSLFYTIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQYGRNGASHAASPQDGVRLS 297

Query: 315 QGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
             +G CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q    ++ 
Sbjct: 298 AADGKCCINGTASVVTSIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRQKRSK 356

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
             +   +C                TL  CL  FT  E L   + +FC +C+ RQ+S K+ 
Sbjct: 357 DQEPGPTC----------------TLSDCLRSFTDLEELDETELYFCHKCKKRQKSTKKF 400

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFP 487
            ++KLP V C H+KRF  ++   +  K+D Y++FPL  LDM  YL               
Sbjct: 401 WVQKLPKVLCLHLKRFHWTAF--LRNKIDTYVEFPLKGLDMRGYLL-------------- 444

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
              +  N+L E S  ++L AVV H G  + +GHY  Y      WY  +D+ +T  NE+ V
Sbjct: 445 ---EPENSLPE-SCVYDLVAVVVHHGSGVGSGHYTAYGSHEGCWYHFNDSTVTLTNEDAV 500

Query: 547 RAAQGYMMFYVQK 559
           R A+ Y++FYV++
Sbjct: 501 RKAKAYILFYVER 513


>gi|389637514|ref|XP_003716392.1| hypothetical protein MGG_03527 [Magnaporthe oryzae 70-15]
 gi|351642211|gb|EHA50073.1| hypothetical protein MGG_03527 [Magnaporthe oryzae 70-15]
 gi|440466876|gb|ELQ36119.1| ubiquitin carboxyl-terminal hydrolase 22 [Magnaporthe oryzae Y34]
 gi|440479877|gb|ELQ60614.1| ubiquitin carboxyl-terminal hydrolase 22 [Magnaporthe oryzae P131]
          Length = 518

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 221/462 (47%), Gaps = 56/462 (12%)

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           SH   VD     L+C  C D V+D   +   +               LRKR+R +  P +
Sbjct: 103 SHRFYVDSRNGMLYCQMCDDYVWDPTLEELRLRKIGAGTF------TLRKRKRDELSPEA 156

Query: 169 PDLRERSLMVN-NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF 227
                R + +N N  P  +          GLRG+ N G TC+ N +LQ+  H P LRNY+
Sbjct: 157 AKEEARYIALNTNQVPCKAT---------GLRGIYNAGATCYQNVILQSFLHNPFLRNYY 207

Query: 228 LSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNL 282
           LSD H    CQ++     C++C +D +F   +  +    Y+ A  L  +W    +  +NL
Sbjct: 208 LSDGHQSGECQTQ----YCMSCAMDDIFQDFYSQETTNGYTAANMLCGFWSLERKAFANL 263

Query: 283 ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACG 341
            + ++QDAHEFF  + + +HE+   D  +P S     C CI H+ + G L+S+  C  CG
Sbjct: 264 VTTKEQDAHEFFQLLAEELHER-NGDGKRPESGSEHLCDCIIHQTYYGKLQSNTTCQGCG 322

Query: 342 FTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRF 401
             +      +D SL L+  Q    K + TKS             S+   +S L  CL+  
Sbjct: 323 SVTNQVQSFLDLSLGLDSTQ-KKKKLAGTKSE----------GGSKGASLS-LQDCLEE- 369

Query: 402 TRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KMSRKVDRY 459
              E + SD+ ++ C +C   Q++ +  S+++LP V    +KRFE+   R   + KVD  
Sbjct: 370 ---EYVKSDKCEYRCNKCSSTQQARRNTSLKRLPNVLSIQLKRFEYKQGRHDKAVKVDTP 426

Query: 460 LQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGH 519
           ++FPL L+M PY               P    + N     + +++LF+VV H G++D GH
Sbjct: 427 VKFPLQLNMFPYTDRG-----------PSTESKENYELARTCQYDLFSVVEHVGEIDTGH 475

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           Y  Y ++ ++W+  +D  +   + + V +A+ Y++FY+ + +
Sbjct: 476 YTCYCKVQDQWFAFNDHRVEMASVSQVLSAKAYLLFYIVRYI 517


>gi|402080094|gb|EJT75239.1| hypothetical protein GGTG_05176 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 517

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 219/460 (47%), Gaps = 56/460 (12%)

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSP 169
           H    D     L+C  C D V+D   +   +    T    ++     RKR+  +    S 
Sbjct: 105 HRFFADSRNGSLYCQICDDLVWDPTLEELRLRKIGTGSFSTT-----RKRKHDELFSDSK 159

Query: 170 DLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLS 229
           D   R + VN      +M+S       GLRG+ N G TC+ N +LQ   H P LRN++LS
Sbjct: 160 D-DPRYISVNT-----TMASCRAT---GLRGIYNAGATCYQNVILQTFLHNPMLRNFYLS 210

Query: 230 DRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLAS 284
           D H    C    GV  CL+C +D +F   +  +    Y+ A  L  +W    +   NL +
Sbjct: 211 DGHRSSDC----GVSYCLSCAMDEIFQDFYALESTNGYTAANILSGFWISERKAFENLVT 266

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFT 343
            ++QDAHEFF  + + +HE+   D  +P       C CI H+ F G L+S   C AC   
Sbjct: 267 TKEQDAHEFFQFLAEELHER-NGDGKRPEIGSEHSCNCIVHQTFYGKLQSTTTCQACHGV 325

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           +      +D SL LE              N +   +  G +S+   G+ TL  CLD    
Sbjct: 326 TNQVQSFLDLSLGLE--------------NLAQRRKKAGSSSAAKAGVLTLQDCLD---- 367

Query: 404 PERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KMSRKVDRYLQ 461
            E + SD+ ++ C  C   Q++ +  SI++LP V    +KRFE+   R   + KV+  +Q
Sbjct: 368 DEYVKSDKCEYRCHSCNSTQQARRHTSIKRLPNVLSIQLKRFEYKGGRHDKAAKVETPVQ 427

Query: 462 FPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           FPLSL+M PY +    R R G      D  E+  L   S  ++L  VV H G++D GHY 
Sbjct: 428 FPLSLNMFPYTN----RGRSG------DSKENYELAR-SCTYDLLGVVVHVGEIDTGHYT 476

Query: 522 TYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           +Y R+ ++W+  +D  +    ++ V +A+ Y++FY+ + L
Sbjct: 477 SYCRVGDQWFVFNDHKVEMAAKSDVLSAKAYLLFYIIRSL 516


>gi|296814738|ref|XP_002847706.1| ubiquitin C-terminal hydrolase Ubp8 [Arthroderma otae CBS 113480]
 gi|238840731|gb|EEQ30393.1| ubiquitin C-terminal hydrolase Ubp8 [Arthroderma otae CBS 113480]
          Length = 458

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 154/543 (28%), Positives = 229/543 (42%), Gaps = 115/543 (21%)

Query: 23  CPHLADFHARNGTKPFRAIQDC--LHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYAC 80
           C HL D    +     R  ++   L+ K P   + +R D+S+    G     S    Y C
Sbjct: 15  CEHLQDIFENDTDAATRLAENYAKLNGKGPWNPSQVRLDASKRSTSG--PKFSLKPQYQC 72

Query: 81  MACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVV 140
           + C AV          V     + SS   H    D     +FC  C D +YD D +    
Sbjct: 73  LQCPAVG---------VKAARCEHSSQTGHIFFADYRSKNVFCQGCDDLIYDVDLE---- 119

Query: 141 LAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                SI++++    + ++R++D      D     + +N    I            G+RG
Sbjct: 120 -----SILKNNIEPIVSRKRKVD--NMEDDEYASYIALNTNKKICG--------KEGVRG 164

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC 260
           L NLG TC+MN +LQ LFH P L  YFL + H+   CQ  N    C  C L   F+    
Sbjct: 165 LFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSDCQKVN----CFGCALADAFAEFSN 220

Query: 261 GDR-MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            ++   +     L + W+ +S+LA Y QQDAHEF+  +++ +HE          + GN D
Sbjct: 221 EEKDEGFGALNLLLASWQKSSDLAGYHQQDAHEFYQFLVNQLHES---------TSGNLD 271

Query: 320 C-----CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           C     C  H  F G LRS + C  CG  S T DP +D SLDL+  +         +S+ 
Sbjct: 272 CDPTCRCFFHTAFFGKLRSTITCGNCGKVSRTEDPVMDVSLDLQVQKRKRALGGGEQSSD 331

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             TL GCL+                              +RKLP
Sbjct: 332 VS---------------PTLQGCLE-----------------------------GLRKLP 347

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
           ++ C  +KRFE +  R +S KV+  + +P S++M PY +    R R  NR          
Sbjct: 348 VILCMQLKRFERN--RSVSEKVETKVSYPASINMMPYTT----RPRSHNR---------- 391

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMM 554
                  +++L +VV H G +D+GHY+ Y R   +W+K +D  +T V E  V  A  Y++
Sbjct: 392 ----SQFQYDLLSVVVHIGDIDSGHYLAYCRHGEQWFKFNDDRVTVVAEAEVLGADAYLL 447

Query: 555 FYV 557
           FY 
Sbjct: 448 FYT 450


>gi|150865635|ref|XP_001384943.2| hypothetical protein PICST_32361 [Scheffersomyces stipitis CBS
           6054]
 gi|149386891|gb|ABN66914.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 565

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 239/523 (45%), Gaps = 87/523 (16%)

Query: 53  RAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEI 112
           R  +R+ SS   RC  C  ++    + C+ C  V C    H+     HA        H  
Sbjct: 108 RLLVRKSSS--LRCTDCSLNNFHHNFTCLQCPHVGCFNDVHN-----HAYTHYKLTQHVF 160

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAA---VVLAHT--TSIIQSSKPENLRKRRRIDYRPW 167
           A+D     L+C  C   V     D     V+L+ T  + +I+S   E        DY   
Sbjct: 161 AIDSHSGLLYCFPCGTYVNHPALDKVRQEVLLSATDYSDLIKSEVDE------EFDY--- 211

Query: 168 SPDLRERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGNTCFMNSVLQALFHTPPLRNY 226
                         S +D+  S    L   GL+G  NLG TCFM+S+LQ   H P ++N+
Sbjct: 212 --------------SDVDAHYSDPSRLGVDGLKGFVNLGATCFMSSILQTFIHNPIIKNH 257

Query: 227 FLSDRHNRYYCQSK--NGVRL-----CLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRH 278
           F ++  + + C+     G  L     C+ C +D +F   +  + +  +     L + W  
Sbjct: 258 FFNNDLHYFNCEKSMAQGSTLDENNACITCSIDNIFQLFYTSNSIEGFGMTNLLTTAWYK 317

Query: 279 ASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP--RSQGNGDC-CIAHRVFSGILRSDV 335
             +LA +++QDAHEF+  +L+  H   E+ +           DC CI H  FSG L+S +
Sbjct: 318 KKSLAGFQEQDAHEFWQFILNEFHSDYERIRSNTGLSPMSTSDCNCITHSTFSGELQSSI 377

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C++C   + T DP VD SL++          +  KSNH    + D            L 
Sbjct: 378 RCLSCESVTKTIDPMVDLSLEI----------NHLKSNHP-GSQID------------LY 414

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CLD FT  E+L  D  + CQ C  + +++K +S++ LP V    +KRF+H+S+   S K
Sbjct: 415 DCLDLFTSDEKL--DVMYTCQSCGDKTKAIKSLSVKSLPPVLSIQLKRFKHNSLNDTSSK 472

Query: 456 VDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL 515
           ++  ++ PL L+M  Y          G+     D  +S  ++E    FELFA+V H G +
Sbjct: 473 IETPIKIPLYLNMTRY--------SIGH-----DPHDSEQIDEDKI-FELFALVCHIGSV 518

Query: 516 DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           + GHY+   +  N +W+K DD+ ++ V++  V     Y++FY+
Sbjct: 519 NTGHYIVLTKDGNGQWFKFDDSVVSMVSQEEVTNTNAYLVFYI 561


>gi|255946868|ref|XP_002564201.1| Pc22g01570 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591218|emb|CAP97445.1| Pc22g01570 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 494

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 234/519 (45%), Gaps = 81/519 (15%)

Query: 57  RRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDV 116
           + ++  VP  G+   +S    Y C++CA V C     + H A        A  H   ++ 
Sbjct: 50  KTETVAVPTTGLRTVASLKPKYHCLSCAEV-CLGSKRAEHTA--------ATGHVFYMES 100

Query: 117 DRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRP-WSPDLRERS 175
               +FC  C D +YD   D            +   P    +   ID R  W+ D     
Sbjct: 101 RNRFVFCEKCVDFIYDHTLD------------RLRGPSG--RFEAIDGRSIWAEDSASEV 146

Query: 176 LMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
            + NNA         N    RG RG+ N+G TC+  S+LQAL H P L  YFL   H+ +
Sbjct: 147 YVKNNAY-------KNPCAIRGARGVWNMGQTCYQASILQALLHDPSLTAYFLGGGHDVH 199

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
            C  K+    CLAC    +F      ++    S A  L+  W+ +  +  Y QQDAHE+F
Sbjct: 200 TCIIKD----CLACATAEVFMEFNSAEKSEAVSAAVLLHHGWQKSKEMRGYRQQDAHEYF 255

Query: 295 ISMLDGIHEKVE---KDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
             +++ +H       +   KP        C  H++F G LRS VMC  CG T+ T DP  
Sbjct: 256 QFLVNELHSSTPGHVESYDKPCE------CFFHQMFYGELRSSVMCHKCGQTTNTHDPMA 309

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLD++  Q       ST S+ S                 TL+GCLD FT  E L +D 
Sbjct: 310 DLSLDVQLQQKKRKLGRSTSSSTS----------------GTLLGCLDSFTAAEDLHADA 353

Query: 412 KFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAP 470
            + C++C    Q + K++ IRKLP++ C  +KR+EHSS    S K++ ++ FPLS++M P
Sbjct: 354 AYHCEKCGNTPQRASKRLQIRKLPVMLCMQLKRYEHSS--NSSEKMNGHIDFPLSVNMLP 411

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN-K 529
           Y            R      D SN +      ++L  V+ H G +D+GHY  Y R+ N K
Sbjct: 412 YTV----------RKDSLPVDMSNYI------YDLSTVIVHQGTMDSGHYYAYTRIENDK 455

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEK 568
           W   DD  +T      V     Y++FY  + L  + ++K
Sbjct: 456 WVLMDDNKVTIAGVAEVLRQDAYLLFYSARYLRAEKTKK 494


>gi|169622653|ref|XP_001804735.1| hypothetical protein SNOG_14553 [Phaeosphaeria nodorum SN15]
 gi|160704821|gb|EAT78093.2| hypothetical protein SNOG_14553 [Phaeosphaeria nodorum SN15]
          Length = 497

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 248/540 (45%), Gaps = 92/540 (17%)

Query: 23  CPHLADF--HARNGTK-PFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           C H+ +   +AR  T   ++AI   +H KP          S   P   +        LY 
Sbjct: 39  CEHMGEMFENARKQTLIAYQAILRNIHEKPSIIAQTHNSSSESKPVVAL------RPLYL 92

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C ++             H  +T + C    +V+     ++C  C+D +YD + +  +
Sbjct: 93  CLQCPSIMTETDRD------HHFETKAHC---FSVESREGNVYCGNCQDFIYDPELE--I 141

Query: 140 VLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR 199
                   I + K  N RK+R+ D    + D++   L+VNN++ +   +        GLR
Sbjct: 142 RRLQKGRYIPACKEYN-RKKRKFDDTTTADDVK---LIVNNSTFLPCRAI-------GLR 190

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+G TCFM+ +LQ L H P +RN++LS+ H +  C+ +     C++C LD MF   +
Sbjct: 191 GLYNMGQTCFMSVILQTLVHNPFIRNFYLSEGHKQADCERE----ACVSCALDEMFVEFY 246

Query: 260 CGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
             D+   +     L   W     LA Y+QQDAHE+   +L+ +H              + 
Sbjct: 247 SSDKNEGFGAVSMLMGSWLAGEALAGYQQQDAHEYMQFILNTLHLA----NGGSTDSDSD 302

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
           DC C+ H+ F G L S V C +C   +T  DP +D SLD++ NQ    K ++ K +   +
Sbjct: 303 DCKCVVHQTFYGKLSSTVTCDSCRNVTTAQDPYMDLSLDIK-NQTKKRKMNADKGD---D 358

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
              D            L  CL+RFT  E+LGS + + C+ C   Q + KQ+SI++LP V 
Sbjct: 359 VPLD------------LRDCLERFTAKEKLGSAE-YTCRNCDSPQNATKQLSIKRLPPVL 405

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
             H+K  + S                L    AP                P + + +  +N
Sbjct: 406 AVHLKILKKS----------------LKSTGAP----------------PTNYNTNTPVN 433

Query: 498 EPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
             S  +EL +V+ H GK+D+GHYV+Y R  N W+  DD+ +   +E  V AA+ Y++FY+
Sbjct: 434 --SLTYELSSVIVHKGKIDSGHYVSYSREGNDWFMFDDSKVVLASEAEVLAAEAYLLFYM 491


>gi|380476733|emb|CCF44547.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum higginsianum]
          Length = 518

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 225/493 (45%), Gaps = 66/493 (13%)

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           Y C+ C+ +      +      H TK      H   VD     L+C  C D V+D   + 
Sbjct: 82  YLCLQCSTIV-----NEEDRLKHGTKKQ----HRFYVDSRSGALYCQICDDLVWDPTLEE 132

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
             V    T    S      RKR+  +   +S  +++ +   +N   I + +++      G
Sbjct: 133 LRVRKMGTGTFSS------RKRKHDEM--FSDGVKDST--ASNPGFISNNTTTASCKANG 182

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRG+ N G TC+ N VLQ+  H P LRN++LSD H    C   N    CL+C +D MF  
Sbjct: 183 LRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHQSTDCSLTN----CLSCAMDDMFQD 238

Query: 258 IFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +  +    ++ A  L  +W    +   NL + ++QDAHEFF  + + +HE+   D  +P
Sbjct: 239 FYAVENTNGFTAASILSGFWISEKKAFENLVTTKEQDAHEFFQFLAEELHER-NGDGKRP 297

Query: 313 RSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
            +     C CI H+ F G L+S   C  CG  +      +D SL LE             
Sbjct: 298 ETGSEHTCNCIIHQTFYGKLQSSTTCQNCGGVTNAVQSFLDLSLGLE------------- 344

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSI 430
                N               TL  CLD     E + SD+ ++ C  C   Q++ +  SI
Sbjct: 345 -----NLSHKRKKGGPKVPSLTLQECLDE----EYVKSDKCEYRCHNCSSMQQAKRATSI 395

Query: 431 RKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++LP V    +KRFE+   R  +   K+D  + FPL L+M PY +    R R  +    F
Sbjct: 396 KRLPNVLAIQLKRFEYKQGRHDRAPSKIDTVVNFPLQLNMLPYTT----RGRGADPKDAF 451

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
           +   S T       ++L +VV H G++D GHYV+Y R+ ++W+K +D  +    ++ V +
Sbjct: 452 ELGRSCT-------YDLLSVVVHVGEIDTGHYVSYCRVGDQWFKFNDHKVEMAPKSDVLS 504

Query: 549 AQGYMMFYVQKML 561
           AQ Y++FY+ + L
Sbjct: 505 AQPYLLFYIIRSL 517


>gi|330934983|ref|XP_003304782.1| hypothetical protein PTT_17458 [Pyrenophora teres f. teres 0-1]
 gi|311318438|gb|EFQ87101.1| hypothetical protein PTT_17458 [Pyrenophora teres f. teres 0-1]
          Length = 499

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 260/544 (47%), Gaps = 98/544 (18%)

Query: 23  CPHLADF--HARNGT-KPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           C H+ +   +AR  T + +RAI   +H KP     A     S   R  V    S   L+ 
Sbjct: 39  CEHMGEMFENARKQTLQHYRAILQNIHEKP--SIIAQTYSGSTDARNVV----SLRPLFL 92

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C ++   V        +H  +T S C    +V+     ++C  C+D +YD   +   
Sbjct: 93  CLQCPSIMTEVDRD-----LHF-ETKSHC---FSVESRDGNIYCGNCQDYIYDEALE--- 140

Query: 140 VLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR 199
                  I++  K    +KR+  D    +    +  L+++N++ +   +        GLR
Sbjct: 141 -------ILRLQKG---KKRKYED----TTTTEDHKLVISNSTFLPCRAI-------GLR 179

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+G TCFM+ +LQ L H P +RN++LS+ H +  C++ +    C++C LD MF    
Sbjct: 180 GLYNMGQTCFMSVILQTLVHNPFIRNFYLSEGHKQTDCENAS----CVSCALDEMFVEFH 235

Query: 260 CGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
             ++   +     L   W     LA Y+QQDAHE+   +L+ +H       +   +  + 
Sbjct: 236 SAEKTEGFGAVSMLMGSWLAGEALAGYQQQDAHEYMQFILNTLHLA-----NGGSTDDSE 290

Query: 319 DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
           DC C+ H+ F                    DP +D SLD+   QG   K    +      
Sbjct: 291 DCKCVVHQTFC-------------------DPYMDLSLDVRI-QGKKRKQQLAEKGEETP 330

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
            +              L  CL+RFT  E+LGS + + C+ C   Q + KQ+SI++LP V 
Sbjct: 331 LD--------------LRDCLERFTVKEKLGSAE-YTCRNCDSPQNATKQLSIKRLPPVL 375

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS--SILRSRFGNRFFPFDGDESNT 495
             H+KRFEH+  +  S K++  ++FP+ LD+ PY ++  + +R+   +   P     ++ 
Sbjct: 376 SIHLKRFEHT--KSTSSKIETPVRFPVKLDIHPYTTAHKAAMRAAKTSGAPP----SNHN 429

Query: 496 LNEPSSE--FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYM 553
           +N P++   +EL +VV H GK+D+GHYV+Y R  + W+  DD+ +  V+E  V AA+ Y+
Sbjct: 430 VNSPTNALVYELSSVVVHKGKIDSGHYVSYSREGSDWFMFDDSKVVLVSEAEVLAAEAYL 489

Query: 554 MFYV 557
           +FY+
Sbjct: 490 LFYM 493


>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
           niloticus]
          Length = 623

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 242/551 (43%), Gaps = 102/551 (18%)

Query: 59  DSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHATKTS 105
           DSS  P        C VC  +  P  + C+ C  V C      H   H     +      
Sbjct: 15  DSSRFPNGTPSSWCCNVCRSNKSP--WICLTCLMVHCGRYVNGHAKKHFEENQVLGVSQR 72

Query: 106 SACSHE-------IAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK 158
               HE       + +D     +FC  C D+    D     V       +QS +   L  
Sbjct: 73  KGEKHEKEKIHHSVCMDCSSYSVFCYRC-DEFVVNDTKLGQV-QKLREHLQSLENSALMG 130

Query: 159 RRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALF 218
            R+          R+R L  + A     +  S+G +  G  GL NLGNTCFMN++LQ+L 
Sbjct: 131 ERQ----------RKRKLQDSPAGDGKLLKDSDG-VALGATGLRNLGNTCFMNAILQSLS 179

Query: 219 HTPPLRNYF-----LSDRHNR------YYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYS 267
           +      YF     ++ R  +      Y+ +S+    + L  +      +++ G++  +S
Sbjct: 180 NIEQFSCYFKELPAVALRSGKTAGRRMYHTRSQGDNSVSLVEEFRKTLCSLWQGNQTAFS 239

Query: 268 PAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR-----------SQG 316
           P    Y+ W+   +   Y+QQDAHEF   +LD +H +++  ++              S  
Sbjct: 240 PDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQYSRNGASHPLSPQDGVRLSST 299

Query: 317 NGDCC------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
           +G CC      +   +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q    +    
Sbjct: 300 DGKCCTNGTASVVTSIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRQKRNKDQ 358

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
           +   +C                TL  CL  FT  E L   + ++C +C+ RQ+S K+  I
Sbjct: 359 EPVPTC----------------TLRDCLHSFTDLEELDDTELYYCHKCKKRQKSTKKFWI 402

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFD 489
           +KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL           +  P  
Sbjct: 403 QKLPKVLCLHLKRFHWTAF--LRNKVDTYVEFPLKGLDMRGYLLEP-------EKSLP-- 451

Query: 490 GDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
                     S  ++L AVV H G  + +GHY  Y     +WY  +D+ +T  NE+TVR 
Sbjct: 452 ---------GSCLYDLVAVVVHHGSGVGSGHYTAYGSHEGRWYHFNDSTVTLTNEDTVRK 502

Query: 549 AQGYMMFYVQK 559
           A+ Y++FYV++
Sbjct: 503 AKAYILFYVER 513


>gi|294656003|ref|XP_458232.2| DEHA2C12804p [Debaryomyces hansenii CBS767]
 gi|199430781|emb|CAG86308.2| DEHA2C12804p [Debaryomyces hansenii CBS767]
          Length = 528

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 227/508 (44%), Gaps = 89/508 (17%)

Query: 61  SEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAE 120
           S+  RC  C  ++    + C+ C  V C    H +H  +H         H  A+D     
Sbjct: 95  SKSLRCTECSLNNFHHNFICLQCPHVGC--CSHHNHAHVHYKMNQ----HLFAIDSHNGL 148

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN 180
           L+C +C D + D + +   +   T S         L     ID    +P ++  S     
Sbjct: 149 LYCFSCGDYINDLELEKIRIGMLTGS------SSTLFDEENIDDNYNNPTVKAVS----- 197

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ-- 238
                           GL+G  NLG+TCFM+ +LQ L H P ++  F ++  + + C+  
Sbjct: 198 ----------------GLKGFINLGSTCFMSCILQTLIHNPIIKYQFFNNDLHYFNCEHN 241

Query: 239 ---SKNGV----RLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDA 290
              S NGV      C+ C +D +F   F  D    +     L + W    +LA  ++QDA
Sbjct: 242 YDYSTNGVITEQNACITCSIDNIFKNFFTSDDTEGFGMTNLLMTSWFKKKSLAGSQEQDA 301

Query: 291 HEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           HEF+  +L+  H+   +  +K     +  C I H  FSG L S ++C  C  T+ T DP 
Sbjct: 302 HEFWQFLLNEFHQDYLRVSNKKFDHDHCKC-ITHTTFSGQLESSIICAECNSTTRTTDPM 360

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
           +D SL+++      MK    +S+H  N                L  CLD FT+ E+L  D
Sbjct: 361 IDLSLEID-----HMK----RSDHLLN----------------LYDCLDLFTKEEKL--D 393

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAP 470
             + CQ C  R  + K + I+K+P V    +KRF+H+       K++  +  PL L++  
Sbjct: 394 VMYKCQHCDNRSRAKKSLRIKKIPPVLSIQLKRFKHNLHNDTFSKIEIPIDIPLFLNITK 453

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN-K 529
           Y S+S+            DGD+          FELFA+V H G ++ GHY+  ++  N +
Sbjct: 454 YTSASMSPE--------LDGDKI---------FELFALVCHIGSVNTGHYIVIIKNGNGQ 496

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYV 557
           W K DD+ I+ +++  V  A  Y++FY+
Sbjct: 497 WLKFDDSVISLISQEEVVKANAYLLFYI 524


>gi|308810327|ref|XP_003082472.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
 gi|116060941|emb|CAL56329.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
          Length = 386

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 136/414 (32%), Positives = 192/414 (46%), Gaps = 104/414 (25%)

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
           SSS   LPRGLRG  N+GNTCF+ SVLQAL  TP +  +FL +RH R  C     V  C 
Sbjct: 27  SSSPRCLPRGLRGSVNMGNTCFVASVLQALVATPSVVEFFLGERHARSEC----AVEHCA 82

Query: 248 ACDLDTMFSAIFCGDRMPYSPA----KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
           AC LD      + G++   S A    + L++WW++  ++A  +QQDAHEFF+S L   H 
Sbjct: 83  ACALDAYVCEAY-GEKDSTSRALVASEVLHAWWQNERSMAKQQQQDAHEFFLSFLSVAHA 141

Query: 304 KV-----EKDQHKP-----------------------------RSQGNGDCC--IAHRVF 327
            V      +++ +P                             +   + D C  + HR F
Sbjct: 142 NVLGKSLRREKKRPVGLEALLSLDITGLDEDEDEEADAAGVDAKVNVSVDACDCVFHRSF 201

Query: 328 SGILRSDVMCMACG-FTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSS 386
           +G+LRSDV C ACG  TST  +  V  S+D+     SS                      
Sbjct: 202 AGLLRSDVACAACGEMTSTILEATVGISIDVPSGTASS---------------------- 239

Query: 387 QNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR----KLPLVSCFHIK 442
                  L  CL  FT  E + S      + C  R  +  +++ R    +LP    FH+K
Sbjct: 240 ------ELTDCLRAFTAAESIES------RGCATRGCATTRLTKRVLFERLPRTLTFHLK 287

Query: 443 RFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           RFE        RK D +++FPL +DM+P               F  DG       +  + 
Sbjct: 288 RFEGGFESNSVRKNDVHVRFPLDIDMSP---------------FVVDGS-----MQAKNV 327

Query: 503 FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           ++L+AVV H+G L+ GHY  Y+R +  W+ CDDA + EV+ + V AAQ YM+FY
Sbjct: 328 YKLYAVVVHSGILEGGHYTVYIRRAWTWFLCDDANVREVDASHVFAAQAYMLFY 381


>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
          Length = 524

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 241/544 (44%), Gaps = 109/544 (20%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATK-----TSSACS----------- 109
           C VC  +  P  + C+ C  V C       +V  HA K      +  CS           
Sbjct: 29  CSVCRSNKSP--WVCLTCMNVHC-----GRYVNGHAKKHFEEIEAPGCSQRKPDREKLRE 81

Query: 110 ----HEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSSKPENLRKRRRID 163
               H + +D +    FC  C + V +      V  V  H  S+ ++S     R+R+R  
Sbjct: 82  KGQQHSVCMDCNSYSTFCYKCDEFVVNDTKLGHVQRVREHLQSL-ENSVCNTDRQRKRKM 140

Query: 164 YRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPL 223
              +SPD + +               S G L +   GL NLGNTCFMN++LQ+L +    
Sbjct: 141 SESFSPDSKMKQ-------------DSEGALVQCATGLRNLGNTCFMNAILQSLSNIQVF 187

Query: 224 RNYF-----LSDRHNR------YYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFL 272
             YF     ++ R  +      Y+ +S+    + L  +      +++ G +  +SP    
Sbjct: 188 SCYFKELPSVALRSGKTAGRRMYHTRSQGDSSVSLVEEFRKTLCSLWQGSQTAFSPDALF 247

Query: 273 YSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ--------------HKPRSQG-- 316
           Y  W+   +   Y+QQDAHEF   +LD +H +++ ++              H   S+   
Sbjct: 248 YVIWKIMPSFRGYQQQDAHEFLRYLLDHLHREMQGNKNGSPSPPVTSDEPNHASESKCFI 307

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
           NG   I   VF G+L+++V C+ CG  S  FDP +D SLD+ PNQ     T   +   +C
Sbjct: 308 NGTSTIVTSVFGGVLQNEVYCLICGTESRKFDPFLDLSLDI-PNQFRIKTTKDQEPGPTC 366

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
                           TL  CL  FT  E L   + + C +C+ RQ+S K+  I+KLP V
Sbjct: 367 ----------------TLSDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKV 410

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
            C H+KRF  ++   +  KVD Y++FP+  LDM  YL                  +  N+
Sbjct: 411 LCLHLKRFHWTAF--LRNKVDTYVEFPMCGLDMKSYLL-----------------EPENS 451

Query: 496 LNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMM 554
           L E    ++L AVV H G  + +GHY  Y R   +WY  +D+ +T V+E  V  A+ Y++
Sbjct: 452 LPE-RCLYDLAAVVVHHGSGIGSGHYTAYGRHEGQWYHFNDSTVTLVSEEAVLKAKAYIL 510

Query: 555 FYVQ 558
           FY +
Sbjct: 511 FYTE 514


>gi|380092726|emb|CCC09479.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 520

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 227/470 (48%), Gaps = 54/470 (11%)

Query: 102 TKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF-DAAVVLAHTTSIIQSSKPENLRKRR 160
           +K  S  SH   V+     L+C  C D V+D  F D  +    T S   S        R+
Sbjct: 94  SKHGSKKSHRFYVESRCGALYCQMCDDIVWDPTFEDLRLKKLGTGSFFGS--------RK 145

Query: 161 RIDYRPWSPD-LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
           R     ++PD +++    ++  + + +  ++      GLRG+ N G TC+ N VLQ+  H
Sbjct: 146 RKHEELFAPDPVKDAPQYISTNTTLATCKAN------GLRGIYNAGATCYQNVVLQSFLH 199

Query: 220 TPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW-- 276
            P LRN++LSD H    C + +    CL+C +D MF   +  +    Y+ A  L  +W  
Sbjct: 200 NPILRNFYLSDGHQSGSCDTPH----CLSCAMDDMFQEFYASETTNGYTAANILSGFWIS 255

Query: 277 --RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRS 333
             +   NL + ++QDAHEFF  M + +HE+   D  +P       C CI H+ + G L++
Sbjct: 256 EKKAFENLVANKEQDAHEFFQFMAEELHER-NGDGKRPEIGSEHTCNCIIHQTYYGKLQT 314

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
              C  CG  +      +D S+ LE     ++     K N +     DG   SQ     T
Sbjct: 315 STTCQNCGGVTNQAQSFLDLSVPLE-----NLTQKRGKKNLA---NGDGPARSQTS--VT 364

Query: 394 LMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRK- 451
           L  CLD     E + SD+ ++ CQ C   Q++ +Q SI+KLP V    +KRFE    R  
Sbjct: 365 LQECLDE----EYIKSDKCEYRCQNCNSVQQARRQTSIKKLPNVLSIQLKRFEFKQGRND 420

Query: 452 MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTH 511
            ++K++  +QFPL L+M PY +    R+R  +    ++   S T       ++L  VV H
Sbjct: 421 RAQKIETPVQFPLQLNMLPYTT----RARTQDLKQDYELQRSCT-------YDLLCVVVH 469

Query: 512 TGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            G +D GHY++Y R+  +W+  +D  +    ++ V  A+ Y++FY+ + L
Sbjct: 470 VGDMDTGHYISYCRVGEQWFAFNDHKVELAQKSDVLNAKAYLLFYIVRSL 519


>gi|448106993|ref|XP_004200881.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
 gi|448110006|ref|XP_004201512.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
 gi|359382303|emb|CCE81140.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
 gi|359383068|emb|CCE80375.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
          Length = 540

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 237/541 (43%), Gaps = 108/541 (19%)

Query: 57  RRDSSEVP------------RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKT 104
           R+D S VP            RC  C  ++     AC+ C  V C +  H      H+   
Sbjct: 72  RKDGSRVPYNKLMELKNTALRCTECSLTNFHHNMACLQCPHVGC-INGHR-----HSYTH 125

Query: 105 SSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDY 164
               SH  A+D+    LFC +C D V D   D                    R R  + Y
Sbjct: 126 YKLSSHMFAIDISNGLLFCFSCGDYVNDDTLD--------------------RIRLEVTY 165

Query: 165 RP---------WSPDLRERSLMVNNASPIDSMSSSNGDLPR--GLRGLNNLGNTCFMNSV 213
            P          S +    S    + S  D  + ++   P   G+RG  NLG TC+M+ +
Sbjct: 166 GPSFQESGSAHASDNQGASSTTGAHISDADPEAYADPAAPAVAGIRGFVNLGATCYMSCI 225

Query: 214 LQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL----------CLACDLDTMFSAIFCGDR 263
           LQ L H P ++  F ++ H+ + C  +N + L          C+ C LD +F + + G  
Sbjct: 226 LQTLVHNPLVKYRFFNNDHHYFNCD-RNRLYLASGTQSEDTACVTCALDHIFKSFYVGGS 284

Query: 264 -MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
              +  + FL + W    + +  ++QDAHEF+  +++ +H   E+    P +     C +
Sbjct: 285 GQGFCMSGFLATAWHKKRSFSGAQEQDAHEFWQFVMNELHHDHERVCGAPAAPETCTC-V 343

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE-PNQGSSMKTSSTKSNHSCNCEAD 381
           AH VF+G L S + C +CG  +   DP +D SL++E P Q ++              E D
Sbjct: 344 AHSVFAGELVSSIRCESCGSVTAKVDPMLDLSLEVESPGQSTT--------------ELD 389

Query: 382 GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHI 441
                       + GCLD FT  E L  D  + CQ CQ    + K + + + P V    +
Sbjct: 390 ------------VNGCLDMFTSEEPL--DALYSCQHCQQEATAYKTLHMGRCPTVLSIQL 435

Query: 442 KRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           KRF+H+S      K+D  +  P+ LDMAPY +SS   SR        D D S T      
Sbjct: 436 KRFKHNSSADSFSKIDTPVAAPMFLDMAPYTTSS---SR-------ADADASPT------ 479

Query: 502 EFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKM 560
            +ELFAVV+H G    GHYV  ++  + +W K DD+ ++ V+ + V A   Y++FY+   
Sbjct: 480 TYELFAVVSHIGSFSTGHYVVAIKTPAGQWLKFDDSVVSLVSPSDVAAMNAYLLFYMVHA 539

Query: 561 L 561
           L
Sbjct: 540 L 540


>gi|342885330|gb|EGU85371.1| hypothetical protein FOXB_04082 [Fusarium oxysporum Fo5176]
          Length = 514

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 218/472 (46%), Gaps = 66/472 (13%)

Query: 100 HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKR 159
           H TK      H   VD     L+C  C D V+D   +   V    T         +   R
Sbjct: 98  HGTKKQ----HRFYVDSRSGCLYCQMCDDFVWDPTLEELRVRKIGTG--------SFSGR 145

Query: 160 RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
           +R     +S  +++    + N +   S  ++      GLRG+ N G TC+ N VLQ+  H
Sbjct: 146 KRKHNELFSDSMKDDPRYITNNTTTASCRAN------GLRGIYNAGATCYQNVVLQSFLH 199

Query: 220 TPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW-- 276
            P LRN++LSD H    CQ    V  CL+C +D MF   +  +    Y+ A  L  +W  
Sbjct: 200 NPLLRNFYLSDGHQSNDCQ----VPHCLSCAMDDMFQDFYALENTNGYTAANILSGFWIS 255

Query: 277 --RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRS 333
             +   NL + ++QDAHEFF  + + +HE+   D  KP       C CI H+ F G +++
Sbjct: 256 EKKAFENLVTTKEQDAHEFFQFLAEELHER-NGDGKKPEIGSEHSCNCIMHQTFYGKMQT 314

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLE-PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS 392
              C  C   S +    +D SL LE   Q  S +T   K +                   
Sbjct: 315 TTTCQNCSGQSNSIQSFLDLSLGLENVVQKKSKRTGQKKPS------------------L 356

Query: 393 TLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR- 450
           TL  CLD     E +  D+ ++ C  C   Q++ +  SI++LP V    +KRFE+   R 
Sbjct: 357 TLQDCLDE----EYIKYDKCEYRCNNCNGTQQAKRHTSIKRLPNVLSIQLKRFEYRHGRH 412

Query: 451 -KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            + + KVD  ++FPL L+M PY           NR    +  ES  L E S  ++L +VV
Sbjct: 413 DRAASKVDNEVKFPLQLNMLPYT----------NRVRNHESRESLEL-ERSCTYDLLSVV 461

Query: 510 THTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            H G++D GHY +Y R+ ++W+K +D  +   + + V  AQ Y++FY+ + L
Sbjct: 462 VHVGEIDTGHYTSYCRVGDQWFKFNDHKVELASLSDVLGAQAYLLFYIIRSL 513


>gi|340931884|gb|EGS19417.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
           thermophilum var. thermophilum DSM 1495]
          Length = 516

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 222/469 (47%), Gaps = 59/469 (12%)

Query: 102 TKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRR 161
           TK  +  SH   V+     L+C  C D V+D  F+   +    T    +S     RKR+ 
Sbjct: 97  TKHGAKKSHRFYVESRSGALYCQMCDDIVWDPTFEELRIRKMGTGTFSAS-----RKRKH 151

Query: 162 IDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTP 221
            +    S  +R+    +   +   +MSS   +   GLRG+ N G TC+ N +LQ   H P
Sbjct: 152 EEMFASSDPIRDNPSYITMNT---TMSSCKAN---GLRGIYNAGATCYQNVILQCFLHNP 205

Query: 222 PLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW---- 276
            LRNY+LSD H    C     V  CL+C +D +F + +  +    Y+ A  L  +W    
Sbjct: 206 ILRNYYLSDGHPSSSCD----VPHCLSCAMDDIFQSFYADESTNGYTAANILSGFWISEK 261

Query: 277 RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDV 335
           +   NL + ++QDAHEFF  + + +HE+   D  +P       C CI H+ + G L++  
Sbjct: 262 KAFENLVTTKEQDAHEFFQFLAEELHER-NGDGKRPEMGSEHTCNCIIHQTYYGKLQTTT 320

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C  C   ++     +D SL LE N     K  + K                  G  TL 
Sbjct: 321 TCQNCQGVTSQVQSFLDLSLPLE-NLAQRKKKGTAKP-----------------GPLTLQ 362

Query: 396 GCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KMS 453
            CL+     E +  D+ ++ C  C   Q++ +Q SIR+LP V    +KRFE+   R + +
Sbjct: 363 ECLEE----EYIKQDKCEYRCNNCGSMQQAKRQTSIRRLPNVLSIQLKRFEYKQGRNERA 418

Query: 454 RKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN-EPSSEFELFAVVTHT 512
            K+D  +QFPL L+M PY S    R+R        + D S     + S  ++L +VV H 
Sbjct: 419 AKIDTPVQFPLQLNMLPYTS----RAR--------NHDVSQNYELQRSCTYDLLSVVVHV 466

Query: 513 GKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           G++D GHYV+Y R+ ++W+  +D  +    ++ V  ++ Y++FY  + L
Sbjct: 467 GEIDTGHYVSYCRVGDQWFVFNDHKVELAQKSDVLNSKAYLLFYCVRSL 515


>gi|443895506|dbj|GAC72852.1| ubiquitin-specific protease [Pseudozyma antarctica T-34]
          Length = 764

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 168/619 (27%), Positives = 255/619 (41%), Gaps = 126/619 (20%)

Query: 52  GRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPP-HSSHVAIHATKTSS---- 106
           G+   +R   + P+CG C  +   R + C+ CA  +C  PP      A+  T   S    
Sbjct: 152 GKPMRKRRKLDYPQCGGC-HTEVLRPFICLECAHTACFSPPIDDDPTAVTRTLADSHMVQ 210

Query: 107 ---ACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID 163
              +  H  A D+    ++C  C+D V+D   +A   L   T+ +Q   P  + ++    
Sbjct: 211 HLRSAKHTFAFDLLYGHVYCGECKDFVHDPLLEAIQRL--ETARVQ---PNGVGQQ---- 261

Query: 164 YRPWSPDLRERSLMVNNASPIDSM------SSSNGDLPRGLRGLNNLGNTCFMNSVLQAL 217
           Y P    + E     N A+   S       + S G   R  RGL N+G TC+MN ++QA 
Sbjct: 262 YGPPKSTI-EALFAPNGAADASSALARFYETDSAGVSCRVPRGLRNMGATCYMNVIIQAF 320

Query: 218 FHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD--------------- 262
            H P LRN+FL+DRHN   C +    + CLAC++D +FS  +  D               
Sbjct: 321 LHNPLLRNFFLADRHNTALCTA---AKTCLACEMDKIFSEFYSSDPGGLAAATSTGPAAA 377

Query: 263 --------------RMPYSPAKFLYSWW--RHASNLASYEQQDAHEFFISMLDGIHEKVE 306
                         + P+ P  FLY  W  + +S L    Q DAHE FIS L+ IH  + 
Sbjct: 378 GGGGAENGANGVLAKGPHGPTSFLYCLWVDQASSELGQAGQHDAHELFISALNSIHTALT 437

Query: 307 KDQHKPRS-------------------QGNGDC--------------------------- 320
               +  S                    GNG                             
Sbjct: 438 SRALERSSLPTFAYEHADALNLLFDHYDGNGGSGHQSEDEAGYGGTPALLGGGGGGGVAG 497

Query: 321 --CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
             C+ HR F+G L+SDV C  CG  +TT DP +D SLD+ P +    K   T +    N 
Sbjct: 498 CPCVVHRTFAGQLQSDVTCQRCGKVNTTRDPMLDLSLDVRP-ESMRRKDGWTGAAGGAN- 555

Query: 379 EADGMNSS-QNCGIST--------LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
           +A  +N   Q  G +         L  CL R+   E+LG++  + C  C     + KQ+S
Sbjct: 556 KAKLLNGKLQTTGAAGGEADEEQHLTICLQRYCSEEKLGNND-YSCTSCGGSASATKQLS 614

Query: 430 IRKLPLVSCFHIKRFEHSS-VRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           + +LP V C  +K    S+       K+D  ++FP  LD+  + ++ I          P 
Sbjct: 615 LYRLPPVLCIQLKVSARSNPPTNGGTKIDTKVRFPPVLDVRQFCTAEIRAPDENAPPAPV 674

Query: 489 D---GDESNTLNEPSSE---FELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           D      S    +P  E   ++LF VV H G ++ GHY  + +    W++ DD  +    
Sbjct: 675 DVRSSSNSGLTPKPDPEAYLYDLFTVVVHEGSMNTGHYTNFSKWRGSWFRFDDDKVHPTT 734

Query: 543 ENTVRAAQGYMMFYVQKML 561
           E  V  A+ Y + Y +++L
Sbjct: 735 EAHVLQARAYQLCYKRRLL 753


>gi|408387850|gb|EKJ67553.1| hypothetical protein FPSE_12261 [Fusarium pseudograminearum CS3096]
          Length = 514

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 213/472 (45%), Gaps = 66/472 (13%)

Query: 100 HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKR 159
           H TK      H   VD     L+C  C D ++D   +   V    T      K    RK 
Sbjct: 98  HGTKKQ----HRFYVDSRSGCLYCQICDDYIWDPTLEELRVRKIGTGSFSGRK----RKH 149

Query: 160 RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
             +    +  D R  S   N AS              GLRG+ N G TC+ N VLQ+  H
Sbjct: 150 DELFTGSFKDDPRFISNNTNTASC----------RANGLRGIYNAGATCYQNVVLQSFLH 199

Query: 220 TPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW-- 276
            P LRN++LSD H    CQ    V  CL+C +D MF   +  +    Y+ A  L  +W  
Sbjct: 200 NPLLRNFYLSDGHQSSDCQ----VPHCLSCAMDDMFQDFYALETTNGYTAANILSGFWIS 255

Query: 277 --RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRS 333
             +   NL + ++QDAHEFF  + + +HE+   D  KP       C CI H+ F G +++
Sbjct: 256 EKKAFENLVTTKEQDAHEFFQFLAEELHER-NGDGKKPEIGSEHSCNCIMHQTFYGKMQT 314

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLE-PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS 392
              C  C   S +    +D SL L+   Q  S +T   K   S                 
Sbjct: 315 TTTCQNCSGQSNSIQSFLDLSLGLDNVVQKKSKRTGQKKPTVS----------------- 357

Query: 393 TLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR- 450
            L  CLD     E +  D+ ++ C  C   Q++ +  SI++LP V    +KRFE+   R 
Sbjct: 358 -LQDCLDE----EYIKYDKCEYRCNNCNGTQQAKRHTSIKRLPNVLSIQLKRFEYKHGRH 412

Query: 451 -KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            + + KVD  ++FPL L+M PY           NR    D  ES  L E S  ++L +VV
Sbjct: 413 DRAASKVDNEVKFPLQLNMMPYT----------NRIRNHDSRESLEL-ERSCTYDLLSVV 461

Query: 510 THTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            H G+LD GHY +Y R+ ++W+K +D  +   + + V  AQ Y++FY+ + L
Sbjct: 462 VHVGELDTGHYTSYCRVGDQWFKFNDHKVELASLSDVLGAQAYLLFYIIRSL 513


>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
           rotundus]
          Length = 520

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 247/555 (44%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           + +                 +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 SKN----------------QENGPVCSLRDCLRSFTDLEELDETELYMCHKCRKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------L 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
            P +    N L      ++L AVV H G  + +GHY  Y +   +W+  +D+ +T  +E+
Sbjct: 443 EPENSGPENCL------YDLAAVVVHHGSGVGSGHYTAYAKHEGRWFHFNDSTVTLADED 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|156042514|ref|XP_001587814.1| hypothetical protein SS1G_11054 [Sclerotinia sclerotiorum 1980]
 gi|154695441|gb|EDN95179.1| hypothetical protein SS1G_11054 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 539

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 228/494 (46%), Gaps = 90/494 (18%)

Query: 103 KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRI 162
           K     SH   V+     LFC  C D V+D   +   V    T    S      RKR+  
Sbjct: 100 KHGQETSHRFYVESRTGALFCQMCNDFVWDPTLEELRVRKTGTGSFSS------RKRKHD 153

Query: 163 DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPP 222
           +    +     R +  N  S     S        G+RG+ N+G TC+MN +LQ+  H P 
Sbjct: 154 ELFTDATKEDPRFISTNTMSAPCRAS--------GVRGIYNMGATCYMNVILQSFVHNPL 205

Query: 223 LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWW----R 277
           LRN++L D H    C+ KN    C++C +D MF   +  +    YS +  L S+W    +
Sbjct: 206 LRNFYLGDGHQASECEQKN----CMSCAMDDMFQDFYSQEITTGYSASNILASFWLSKRK 261

Query: 278 HASNLASYEQQDAHEFFISMLDGIHE------KVEKDQHKP---RSQGNGDC-CIAHRVF 327
               LAS ++QDAHEFF  + + +HE        +++   P   RS+ +  C CI H+ F
Sbjct: 262 AYEELASNKEQDAHEFFQFLTEELHEINGGSRASDREDSSPNPKRSKMDQGCKCIVHQTF 321

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ-GSSMKTSSTKSNHSCNCEADGMNSS 386
            G L+S + C  CG  +T+ +  +D SL L+  Q  S +K +S                 
Sbjct: 322 YGKLQSTITCQNCGDVNTSVESFLDLSLGLDVIQKKSKLKAAS----------------- 364

Query: 387 QNCGISTLMGCLD-RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
              G  +L  CLD  + R ER     ++ C QC   QE+ KQ+SI+ LP V C  +KRF+
Sbjct: 365 ---GTISLQRCLDEEYIRAERC----EYSCHQCDT-QEAKKQLSIKSLPNVLCIQLKRFK 416

Query: 446 HSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
               R ++ K+D  + FPL L M PY +    R+R  +    F+   S T       ++L
Sbjct: 417 QDP-RGLASKIDTTVTFPLQLHMLPYTN----RARGQDTKNNFELARSCT-------YDL 464

Query: 506 FAVVTHTGKLD------------------AGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
            +VV H G L+                   GHYV+Y R+ N+W+K +D  +T  +++ V 
Sbjct: 465 QSVVVHVGNLETGEQALLSLLSFTTPYIVGGHYVSYSRVGNQWFKFNDHNVTLASKSQVL 524

Query: 548 AAQGYMMFYVQKML 561
             Q +++FYV + L
Sbjct: 525 NEQAFLLFYVIQSL 538


>gi|255725706|ref|XP_002547782.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240135673|gb|EER35227.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 543

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 246/589 (41%), Gaps = 143/589 (24%)

Query: 17  QIFPQP--------CPHLADFHARNGTKP-FRAIQDCLHIKPPGGRAAI--RRDSSEVP- 64
           ++ PQP        CPH+      N     F   +  + I  P        ++D S +P 
Sbjct: 49  ELTPQPDNYSCIKSCPHIISVLESNAKNTVFETYKQAVLISQPISNKVYHSKKDHSLIPQ 108

Query: 65  -----------RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIA 113
                      +C  C  ++      C+ C  V C    H+     H+     +  H+ +
Sbjct: 109 SKILSSKIKSLKCNECHLNNFENSMICLQCPHVGCCFNNHN-----HSYSHYKSTKHQYS 163

Query: 114 VDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRP---WSPD 170
           +D     L+C  C D +   D +   +     S+I S            DY     ++ D
Sbjct: 164 IDTGSGLLYCYRCNDFINHPDLERIRM-----SVIDS------------DYSTSGTYNED 206

Query: 171 LRERSLMVNNASPIDSMSSSNGDLP-RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLS 229
             E     N   P        G L  RGL+G  NLG TCFM+S+LQ L H P ++ +F +
Sbjct: 207 SNE-----NYREP--------GKLATRGLKGFVNLGATCFMSSILQTLIHNPIIKYHFFN 253

Query: 230 DRHNRYYCQS------KNGV----RLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRH 278
           +  + + C+        NG       C+ C +D +F   F  D +  ++ + FL + W  
Sbjct: 254 NDLHYFNCERGHNQDINNGFIDENNACITCSMDNIFKTFFTSDNLDGFALSNFLATSWHK 313

Query: 279 ASNLASYEQQDAHEFFISMLDGIHEKVEK-----DQHKPRSQGNGDC-CIAHRVFSGILR 332
             +LA +++QDAHEFF  +L+ +H    +      +    + GN  C CI+H V+   L+
Sbjct: 314 KKSLAGFQEQDAHEFFQFLLNELHIDHVRLMDTLGEGASETHGNSPCSCISHSVYGFQLK 373

Query: 333 SDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS 392
           S + C +C + S T +   D SL+L  + G                              
Sbjct: 374 SSIECDSCEYVSNTMEHVNDLSLELNNSGG------------------------------ 403

Query: 393 TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKM 452
            L  CLD+FT+ E L   + + C +C   + + K + I+ +P V   H+KRF+H      
Sbjct: 404 -LSDCLDQFTKAEHL---EHYTCTKCSSVKTTTKTLKIQTVPTVLTLHLKRFKHD---LN 456

Query: 453 SRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE----FELFAV 508
           S K++  ++ P+ L+++ Y                        + +P  +    +ELF V
Sbjct: 457 STKIETKIEIPMFLNLSEY-----------------------CVEKPQPDVKQIYELFGV 493

Query: 509 VTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           V H G +  GHY  Y++ S  WYKCDD+ ++ VN++ V  +  Y++FY+
Sbjct: 494 VVHEGSISTGHYTVYIKNSGHWYKCDDSVVSLVNQDEVLNSNAYLLFYI 542


>gi|440802895|gb|ELR23814.1| ubiquitin specific protease 22 family protein, partial
           [Acanthamoeba castellanii str. Neff]
          Length = 258

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/273 (40%), Positives = 152/273 (55%), Gaps = 33/273 (12%)

Query: 276 WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDV 335
           WRHA NLA Y+QQDAHEF IS L+G+H+      H   S      CI H++FSG LRSD+
Sbjct: 2   WRHADNLAGYDQQDAHEFLISTLNGLHK------HSGGSTAASCRCIVHQIFSGRLRSDL 55

Query: 336 MCMACGFTSTTFDPCVDFSLDL-----EPNQGS-SMKTSSTKSNHSCN--------CEAD 381
            C+ CG+TST  DP  D SLDL      P Q + S++   T  + S           +A 
Sbjct: 56  TCLRCGYTSTAIDPFFDISLDLPKARSAPRQAAGSLQQQQTVGDDSLTPPPLTTTASDAA 115

Query: 382 GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKLPLVSCFH 440
                +      L  CL RFT+ ERLGS + F CQ C    Q+S KQ+S++ LPLV CFH
Sbjct: 116 AAMEIEEEDECNLHACLRRFTQAERLGSAEAFRCQGCNNTYQDSTKQLSMQSLPLVLCFH 175

Query: 441 IKRFEHSSVRKM--SRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
           +KRF+   +     S K+D ++++P  LDM+PY SS+I+  R G              + 
Sbjct: 176 LKRFKQEGLASTASSSKIDTHIRYPFVLDMSPYASSTIVSQRLGR----------EPPSA 225

Query: 499 PSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWY 531
           P   +ELFAVV H GK+D GH+V ++R  ++W+
Sbjct: 226 PPDLYELFAVVDHKGKIDNGHFVCFVRHESRWF 258


>gi|46127161|ref|XP_388134.1| hypothetical protein FG07958.1 [Gibberella zeae PH-1]
          Length = 436

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 209/458 (45%), Gaps = 62/458 (13%)

Query: 114 VDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRE 173
           VD     L+C  C D ++D   +   V    T      K    RK   +    +  D R 
Sbjct: 30  VDSRSGCLYCQICDDYIWDPTLEELRVRKIGTGSFSGRK----RKHDELFTGSFKDDPRF 85

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHN 233
            S   N AS              GLRG+ N G TC+ N VLQ+  H P LRN++LSD H 
Sbjct: 86  ISSNTNTASC----------RANGLRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHQ 135

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQ 288
              CQ    V  CL+C +D MF   +  +    Y+ A  L  +W    +   NL + ++Q
Sbjct: 136 SSDCQ----VSHCLSCAMDDMFQDFYALETTNGYTAANILSGFWISEKKAFENLVTTKEQ 191

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTF 347
           DAHEFF  + + +HE+   D  KP       C CI H+ F G +++   C  C   S + 
Sbjct: 192 DAHEFFQFLAEELHER-NGDGKKPEIGSEHSCNCIMHQTFYGKMQTTTTCQNCSGQSNSI 250

Query: 348 DPCVDFSLDLE-PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
              +D SL L+   Q  S +T   K   S                  L  CLD     E 
Sbjct: 251 QSFLDLSLGLDNVVQKKSKRTGQKKPTVS------------------LQDCLDE----EY 288

Query: 407 LGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFP 463
           +  D+ ++ C  C   Q++ +  SI++LP V    +KRFE+   R  + + KVD  ++FP
Sbjct: 289 IKYDKCEYRCNNCNGTQQAKRHTSIKRLPNVLSIQLKRFEYKHGRHDRAASKVDNEVKFP 348

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTY 523
           L L+M PY           NR    D  ES  L E S  ++L +VV H G+LD GHY +Y
Sbjct: 349 LQLNMMPYT----------NRIRNHDSRESLEL-ERSCTYDLLSVVVHVGELDTGHYTSY 397

Query: 524 LRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            R+ ++W+K +D  +   + + V  AQ Y++FY+ + L
Sbjct: 398 CRVGDQWFKFNDHKVELASLSDVLGAQAYLLFYIIRSL 435


>gi|116179558|ref|XP_001219628.1| hypothetical protein CHGG_00407 [Chaetomium globosum CBS 148.51]
 gi|88184704|gb|EAQ92172.1| hypothetical protein CHGG_00407 [Chaetomium globosum CBS 148.51]
          Length = 513

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 209/440 (47%), Gaps = 59/440 (13%)

Query: 98  AIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLR 157
           A H TK S    H   V+     L+C  C D V+D  F+   +    T         +LR
Sbjct: 97  ARHGTKKS----HRFYVESRSGALYCQMCDDIVWDPTFEELRLKKIGTGTF------SLR 146

Query: 158 KRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL 217
           KR+  +    S  +R+      N + I S +++      GLRG+ N G TC+ N VLQ+ 
Sbjct: 147 KRKHEELFETSDPVRD------NPAYISSNTTTASCKSNGLRGIYNAGATCYQNVVLQSF 200

Query: 218 FHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW 276
            H P LRN++LSD H+   C     V  CL+C +D MF   +  +    Y+ A  L ++W
Sbjct: 201 LHNPILRNFYLSDGHSSSTC----NVEYCLSCAIDDMFQDFYSLENTNGYTAASILSAFW 256

Query: 277 RHASN----LASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGIL 331
            +       L + ++QDAHEFF  + + +HE+   D  KP S     C CI H+ F G L
Sbjct: 257 YNQKKAFEILVATKEQDAHEFFQFLAEELHER-NGDGKKPESGSEHSCNCIIHQTFYGKL 315

Query: 332 RSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGI 391
           +S   C  C   +      +D SL LE       K S+++                  G+
Sbjct: 316 QSTTTCQNCSGVTHQVQSFLDLSLPLENLSHKKGKKSASR------------------GL 357

Query: 392 STLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
            TL  CLD     E + SD+ ++ C  C   Q++ +Q SI++LP V    +KRFE+   R
Sbjct: 358 LTLQECLDE----EYIKSDKCEYRCHSCNSMQQARRQTSIKRLPNVLSIQLKRFEYKQGR 413

Query: 451 -KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            + + K+D  +QFPL L+M PY +    R R G      D  + N     S  ++L +VV
Sbjct: 414 NERAAKIDTPVQFPLELNMLPYTN----RGRSGGS----DAGKDNYELARSCTYDLVSVV 465

Query: 510 THTGKLDAGHYVTYLRLSNK 529
            H G++D GHYV+Y R+ ++
Sbjct: 466 VHVGEIDTGHYVSYCRVGDQ 485


>gi|326437244|gb|EGD82814.1| hypothetical protein PTSG_03464 [Salpingoeca sp. ATCC 50818]
          Length = 303

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 168/324 (51%), Gaps = 49/324 (15%)

Query: 246 CLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
           CLAC L   FS ++ G+R   +P   LY+ W+H   LA Y Q D HEFFI++LD +H  +
Sbjct: 21  CLACLLSDFFSEMYTGNRQQLAPTNMLYAVWKHLRQLAGYAQHDCHEFFIALLDRLHRHL 80

Query: 306 EKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            +   +P    +    +   VF+G+++SDV+C  C   S+T +P  D SL + P+   S 
Sbjct: 81  -RPPDEPMHLLSKQPSVVRSVFTGLMQSDVICRRCDNVSSTHEPFYDISLGIRPSTHDSP 139

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
            +                       + +L GCL R+T PE LGSD + FC +CQ RQ + 
Sbjct: 140 TS-----------------------LVSLRGCLARYTSPEDLGSDARVFCPRCQARQLAQ 176

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           K++ I + P    FH+KRFEH  + ++ +K+  +++FP S+DM PYL  S          
Sbjct: 177 KRLMIAQPPKTLTFHLKRFEH--IPRL-QKITTFVEFPTSIDMRPYLVQS---------- 223

Query: 486 FPFDGDESNTLNEPSSE-----FELFAVVTHTGKLDAGHYVTYLRLSN---KWYKCDDAW 537
               G  ++T     S      + L+ VV H GK+++GHY+ Y+RL++   +W  CDD  
Sbjct: 224 ----GGGAHTAAMAHSAHAPIMYSLYCVVVHIGKIESGHYICYIRLNHPHEQWVCCDDDT 279

Query: 538 ITEVNENTVRAAQGYMMFYVQKML 561
           +T V    V +   YM+ Y++  L
Sbjct: 280 LTPVTAAEVLSKPAYMLLYMKDEL 303


>gi|358385638|gb|EHK23234.1| hypothetical protein TRIVIDRAFT_208720 [Trichoderma virens Gv29-8]
          Length = 516

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 219/461 (47%), Gaps = 59/461 (12%)

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSP 169
           H   VD     L+C  C D V+D   +   V    T    ++     RKR+  +   ++ 
Sbjct: 105 HRFYVDSRSGALYCQICDDLVWDPTLEELRVRKIGTGTFSTN-----RKRKHDEL--FAD 157

Query: 170 DLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLS 229
             +E   +++  + + S  +S      GLRG+ N G TC+ N VLQ+  H P LRN++LS
Sbjct: 158 SAKEDPRLISANTTVASCRAS------GLRGIYNAGATCYQNVVLQSFLHNPLLRNFYLS 211

Query: 230 DRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLAS 284
           D H    C     +  C++C +D MF   +  +    Y+ A  L  +W    +   NL +
Sbjct: 212 DGHQSSEC----SISHCMSCAMDDMFQDFYALESTNGYTAANILSGFWISEKKAFENLVT 267

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFT 343
            ++QDAHEFF  + + +HE+   D  KP+      C CI H+ F G +++   C  CG  
Sbjct: 268 TKEQDAHEFFQFLAEELHER-NGDGKKPQGGSEHTCNCIIHQTFYGKMQTVTTCQNCGGM 326

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           +      +D SL ++       K                  + Q     +L  CLD    
Sbjct: 327 THAVQSFLDLSLGVDTLAQRRAK-----------------KTGQKLPALSLNDCLDE--- 366

Query: 404 PERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR--KMSRKVDRYL 460
            E + SD+ ++ C  C   Q++ +  +I++LP V    +KRFE    +  + + K+D  +
Sbjct: 367 -EYVKSDKCEYRCHSCASIQQARRYTNIKRLPNVLSIQLKRFEFKQGKHDRAASKIDNTV 425

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHY 520
           QFPL L+M PY + +  RSR        D  E+  L E S  ++L +VV H G+++ GHY
Sbjct: 426 QFPLQLNMLPYTNRA--RSR--------DSRENMEL-ERSCTYDLLSVVVHVGEIETGHY 474

Query: 521 VTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           V+Y R+ ++W+K +D  +     + V  AQ Y++FY+ + L
Sbjct: 475 VSYCRVGDQWFKFNDHKVELARVSDVLGAQAYLLFYIIRSL 515


>gi|336272902|ref|XP_003351206.1| hypothetical protein SMAC_03509 [Sordaria macrospora k-hell]
          Length = 403

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 189/373 (50%), Gaps = 38/373 (10%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRG+ N G TC+ N VLQ+  H P LRN++LSD H    C + +    CL+C +D MF 
Sbjct: 60  GLRGIYNAGATCYQNVVLQSFLHNPILRNFYLSDGHQSGSCDTPH----CLSCAMDDMFQ 115

Query: 257 AIFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
             +  +    Y+ A  L  +W    +   NL + ++QDAHEFF  M + +HE+   D  +
Sbjct: 116 EFYASETTNGYTAANILSGFWISEKKAFENLVANKEQDAHEFFQFMAEELHER-NGDGKR 174

Query: 312 PRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
           P       C CI H+ + G L++   C  CG  +      +D S+ LE     ++     
Sbjct: 175 PEIGSEHTCNCIIHQTYYGKLQTSTTCQNCGGVTNQAQSFLDLSVPLE-----NLTQKRG 229

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMS 429
           K N +     DG   SQ     TL  CLD     E + SD+ ++ CQ C   Q++ +Q S
Sbjct: 230 KKNLA---NGDGPARSQTS--VTLQECLDE----EYIKSDKCEYRCQNCNSVQQARRQTS 280

Query: 430 IRKLPLVSCFHIKRFEHSSVRK-MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           I+KLP V    +KRFE    R   ++K++  +QFPL L+M PY +    R+R  +    +
Sbjct: 281 IKKLPNVLSIQLKRFEFKQGRNDRAQKIETPVQFPLQLNMLPYTT----RARTQDLKQDY 336

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
           +   S T       ++L  VV H G +D GHY++Y R+  +W+  +D  +    ++ V  
Sbjct: 337 ELQRSCT-------YDLLCVVVHVGDMDTGHYISYCRVGEQWFAFNDHKVELAQKSDVLN 389

Query: 549 AQGYMMFYVQKML 561
           A+ Y++FY+ + L
Sbjct: 390 AKAYLLFYIVRSL 402


>gi|323447747|gb|EGB03658.1| hypothetical protein AURANDRAFT_55480 [Aureococcus anophagefferens]
          Length = 542

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 242/552 (43%), Gaps = 108/552 (19%)

Query: 60  SSEVPRCGVCGDSSCPR---LYACMACAAVSCHVP--------PHSSHVAIHATKTSSAC 108
           SS  P C  CG +   R   +  C+ C  V C  P            H  +H T  +S  
Sbjct: 45  SSPAP-CMTCGYARLTRGHDVLVCLHCGHVGCWNPFIAQDGLRGSGRHGQLHFTMDAS-- 101

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDA-----AVVLAHTTS---IIQSS---KPENLR 157
            H +A  V R EL+C  C D V D  F +     ++ LA   +    ++SS   +  +L+
Sbjct: 102 -HWLAAHVGRFELYCGRCGDFVSDDCFQSRLDSPSIRLARCPNYNYFVESSACVEATSLK 160

Query: 158 KRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDL------PRGLRGLNNLGNTCFMN 211
            +  I    W     ER+L       I  +    G+        RGLRGL N+GNTCFM+
Sbjct: 161 TKSTI----WP----ERAL-----GDIPCLQHFKGEPDKREWGGRGLRGLVNMGNTCFMS 207

Query: 212 SVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV----------------RLCLACDLDTMF 255
            +LQ L H P  + YFL        C  K  V                  C++C+L   F
Sbjct: 208 CILQVLIHNPASQAYFLERGCASRACLGKTIVACGDSERTKPDKLWISETCISCELAYFF 267

Query: 256 SAIF----CGDRM--PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           +AIF       R   P  P + LY+ W+    +  Y Q+DAHEF + +LDG+        
Sbjct: 268 AAIFEHRDGAQRTADPIVPHRLLYTAWKLTDLMIGYGQRDAHEFLMILLDGLL------M 321

Query: 310 HKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
           H  R Q +      H+ F G+ RSDV+C ACG TS+  +P  D S+ +    G + + + 
Sbjct: 322 HCSRDQAHNSISFIHKTFRGLFRSDVVCTACGTTSSYTEPFFDLSVPV----GDTARQNV 377

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                   C  D               CL  FT  E L       C  C    +  KQ++
Sbjct: 378 DAEPARPLCLED---------------CLAHFTSVEVLVDAH--ICSGCGAAVKREKQLT 420

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           I  LP V   H+KRF+    RK++  VD     PL  D+ P+LS    R++  N+     
Sbjct: 421 IEALPNVLIVHLKRFDALGSRKVTEVVDFPTDSPL--DLGPFLSK--WRAKANNK----- 471

Query: 490 GDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAA 549
               ++L  P   +EL AVV H G  + GHY ++++    W+ CDD  I  V+  TV+ +
Sbjct: 472 ----SSLPTPHL-YELNAVVNHHGDANKGHYTSFVKDGGLWFLCDDHSIKHVDLETVKHS 526

Query: 550 QGYMMFYVQKML 561
           +GY++FY++K++
Sbjct: 527 EGYLLFYIRKVM 538


>gi|406602917|emb|CCH45581.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
          Length = 358

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 185/367 (50%), Gaps = 61/367 (16%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRG  N+G+TCFM+SVLQ + H P +RNYF+S+ H         G   C+ C +D + +
Sbjct: 51  GLRGFVNMGSTCFMSSVLQTIIHNPIIRNYFMSEGH----IDCLKGKNECITCCVDEIIT 106

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
             F  ++   + P   L + W+   +LA Y +QDAHEF+  +++ +H  +    +   S 
Sbjct: 107 DFFTSNKTSGFGPTSLLSAAWKSNKSLAGYSEQDAHEFWQFLVNELHHGLTSGDNHNSST 166

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
            +   C+ H+ FS  L+S + C+ CG  +   DP +D SL++                  
Sbjct: 167 CD---CVVHKAFSSDLQSSITCLECGNITNATDPMIDLSLEI------------------ 205

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                    S QN     ++ CL  FT+ E+L  D K+ C +C  R  + KQ+SI K P 
Sbjct: 206 ---------SGQN---DNVVDCLRNFTQTEQL--DIKYSCSKCNQRTNATKQLSILKFPN 251

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    +KRF+H++    S K++ +++FP+ ++M+ + + S                 +N 
Sbjct: 252 VLSLQLKRFKHNN---QSIKIESFIKFPMFINMSEFATIS-----------------NNV 291

Query: 496 LNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMM 554
               +  +ELFAVV H G ++ GHY+T ++ +  KW++ DD+ +T +    V   Q Y++
Sbjct: 292 PQAGALNYELFAVVCHIGSVNTGHYITVIKNNEGKWFRFDDSVVTLLEWEQVSKLQAYLL 351

Query: 555 FYVQKML 561
           FY+   L
Sbjct: 352 FYMIHQL 358


>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
           latipes]
          Length = 508

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 206/420 (49%), Gaps = 72/420 (17%)

Query: 172 RERSLMVNNASPIDSMSSSNGD-LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF--- 227
           R+R    N+AS  D     +G+ +  G  GL NLGNTCFMN++LQ+L +      YF   
Sbjct: 58  RKRKFQENSAS--DGKLLKDGENVALGATGLRNLGNTCFMNAILQSLSNIEQFSCYFKEL 115

Query: 228 --LSDRHNR------YYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
             ++ R  +      Y+ +S+    + L  +      +++ G++  +SP    Y+ W+  
Sbjct: 116 PAVALRSGKTAGRRMYHTRSQGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIM 175

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR-----------SQGNGDCC------I 322
            +   Y+QQDAHEF   +LD +H +++  ++              S   G CC      +
Sbjct: 176 PSFRGYQQQDAHEFMRYLLDHLHRELQYSRNGASHPVSPQDGVRLSSAEGKCCTNGAPSV 235

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
              +F G+L+++V C+ CG  S  FDP +D SLD+ P+Q    ++   + + +C      
Sbjct: 236 VTSIFGGLLQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRQKRSKDQEPSPTC------ 288

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                     TL  CL  FT  E L   + ++C +C+ RQ+S K+  I  LP V C H+K
Sbjct: 289 ----------TLRDCLYSFTDLEELDETELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLK 338

Query: 443 RFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           RF  ++   +  K+D Y++FPL  LDM  YL                  +  N+L  P S
Sbjct: 339 RFHWTAF--LRNKIDTYVEFPLKGLDMRGYLL-----------------EPENSL--PGS 377

Query: 502 -EFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             ++L AVV H G  + +GHY  Y      WY  +D+ +T  NE+TVR A+ Y++FYV++
Sbjct: 378 CLYDLVAVVVHHGSGVGSGHYTAYGSHEACWYHFNDSTVTLTNEDTVRKAKAYILFYVER 437


>gi|428184503|gb|EKX53358.1| hypothetical protein GUITHDRAFT_133087 [Guillardia theta CCMP2712]
          Length = 526

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 217/479 (45%), Gaps = 81/479 (16%)

Query: 53  RAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEI 112
           + A ++ S   P+C  C +     L+  +    + C         A H  + + A    I
Sbjct: 45  QKASKKSSIAPPKCFTCDEGPLRTLFLSLHKVYIGCLE-------AGHMKEFAEANKAHI 97

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPEN--------------LRK 158
           AVDV R ELFC AC++     + + +          +SSK ++              L  
Sbjct: 98  AVDVARGELFCFACKNYSSGSNGEKSKDQQEGAPQAESSKTDSHLAHKEATGRAQDLLLP 157

Query: 159 RRRI----DYR---PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMN 211
           RRR+    DY    P  P+ R  SL V+      + SSS+     GL+G +N        
Sbjct: 158 RRRVWIPSDYEASTPLGPEPRLMSLQVDLLKE-HARSSSSSQGVAGLKGFHN-------- 208

Query: 212 SVLQALFHTPPLRNYFLSDRHNRYYCQSKN-----GVRLCLACDLDTMFSAIFCGDRMPY 266
               AL H P +R+YFL D HNR+ C  K        ++C+ C++D + +  F   +  Y
Sbjct: 209 ----ALVHNPGVRDYFLGDYHNRFRCLKKREGEGRQEQVCMGCEMDRLLNDFFQCGKSAY 264

Query: 267 SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRV 326
           +P +FLY+ WR + +LA YEQQDAHE FIS+LD +H     D         G+      +
Sbjct: 265 TPHQFLYNMWRSSQHLAGYEQQDAHECFISVLDALHNSCANDV-------TGEQGAMQNL 317

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLE---PNQGSSMKTSSTKSNHSCNCEADG- 382
           F G +RSDV CM C  +S T DP +D SL+L    P +  S   S           AD  
Sbjct: 318 FRGRMRSDVTCMCCKTSSITRDPFLDISLELRTLSPIKAPSENGSLCPLVQGMFNGADAD 377

Query: 383 --------------------MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                               + S ++    +L  CL+ FTR E+L + Q + C+ C+  Q
Sbjct: 378 SSSGHGDSSSSSAGDKRPADLISDESGDTVSLSECLEWFTRVEQLDA-QSYRCESCKGYQ 436

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEH---SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
             +KQ+SI +L    C  IKRFE     +  + S KVD ++ FPL L+M+PY+S  + R
Sbjct: 437 PGIKQLSIEQLAPSLCIQIKRFESQRGGAGGQQSFKVDTHVTFPLRLNMSPYMSKQVFR 495


>gi|340518821|gb|EGR49061.1| predicted protein [Trichoderma reesei QM6a]
          Length = 437

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 218/457 (47%), Gaps = 59/457 (12%)

Query: 114 VDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRE 173
           VD     L+C  C D V+D   +   V    T    ++     RKR+  +   ++   +E
Sbjct: 30  VDSRTGALYCQICDDLVWDPTLEELRVRKIGTGTFSTN-----RKRKHDEL--FAESSKE 82

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHN 233
              +++  + + S  +S      GLRG+ N G TC+ N VLQ+  H P LRN++LSD H 
Sbjct: 83  DPRIISANTTVASCRAS------GLRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHQ 136

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQ 288
              C     +  CL+C +D MF   +  +    Y+ A  L  +W    +   NL + ++Q
Sbjct: 137 SSEC----SISHCLSCAMDDMFQDFYALESTNGYTAANILSGFWISEKKAFENLVTTKEQ 192

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTF 347
           DAHEFF  + + +HE+   D  +P+S     C CI H+ F G +++   C  C  ++   
Sbjct: 193 DAHEFFQFLAEELHER-NGDGKRPQSGSEHTCNCIIHQTFYGKMQTTTTCQNCHNSTHAV 251

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
              +D SL ++       K                  + Q     TL  CLD     E +
Sbjct: 252 QSFLDLSLGVDTLAQRRAK-----------------KTGQKLPALTLGDCLDE----EYV 290

Query: 408 GSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPL 464
            SD+ ++ C +C   Q++ +  SI++LP V    +KRFE    +  + + K+D  + FPL
Sbjct: 291 KSDKCEYRCHKCASIQQARRHTSIKRLPNVLSIQLKRFEFKQGKHDRAASKIDNPVSFPL 350

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL 524
            L+M PY +      R  NR    D  E+  L E S  ++L +VV H G+++ GHYV+Y 
Sbjct: 351 QLNMLPYTN------RARNR----DSRENLEL-ERSCTYDLLSVVVHVGEIETGHYVSYC 399

Query: 525 RLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           R+ ++W+K +D  +     + V  AQ Y++FY+ + L
Sbjct: 400 RVGDQWFKFNDHKVELARVSDVLGAQAYLLFYIIRSL 436


>gi|358394273|gb|EHK43666.1| hypothetical protein TRIATDRAFT_137555 [Trichoderma atroviride IMI
           206040]
          Length = 437

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 219/457 (47%), Gaps = 59/457 (12%)

Query: 114 VDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRE 173
           VD     L+C  C D V+D  F+   V    T         ++ ++R+ D   ++   +E
Sbjct: 30  VDSRNGSLYCQICDDFVWDPTFEELRVRKIGTGTF------SMNRKRKHD-ELFADSGKE 82

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHN 233
              +++  +   S  +S      GLRG+ N G TC+ N VLQ+  H P LRN++LSD H 
Sbjct: 83  DPRLISANTVAASCRAS------GLRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHQ 136

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQ 288
              C     +  CL+C +D MF   +  +    Y+ A  L  +W    +   NL + ++Q
Sbjct: 137 SGDC----SIPYCLSCAMDDMFQDFYALESTNGYTAASILSGFWISEKKAFENLVTTKEQ 192

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTF 347
           DAHEFF  + + +HE+   D  +P+S     C CI H+ F G +++   C  CG  +   
Sbjct: 193 DAHEFFQFLAEELHER-NGDGKRPQSGSEHTCSCIIHQTFYGKMQTTTTCQNCGGQTHAV 251

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
              +D SL ++       K                  + Q     TL  CLD     E +
Sbjct: 252 QSFLDLSLGVDTLAQRRAK-----------------KTGQKLPALTLNDCLDE----EYV 290

Query: 408 GSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPL 464
            SD+ ++ C  C   Q++ +  +I++LP V    +KRFE    +  + + K+D  ++FPL
Sbjct: 291 KSDKCEYRCHSCASIQQARRYTNIKRLPNVLSVQLKRFEMKQGKHDRSASKIDNTVRFPL 350

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL 524
            L+M PY + +  RSR        D  E+  L E S  ++L +VV H G+++ GHYV+Y 
Sbjct: 351 QLNMLPYTNRA--RSR--------DSRENMEL-ERSCTYDLLSVVVHVGEIETGHYVSYC 399

Query: 525 RLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           R+ ++W+K +D  +     + V  AQ Y++FY+ + L
Sbjct: 400 RVGDQWFKFNDHKVELAKVSDVLGAQAYLLFYIIRSL 436


>gi|302883654|ref|XP_003040726.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256721616|gb|EEU35013.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 434

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 211/457 (46%), Gaps = 62/457 (13%)

Query: 114 VDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRE 173
           VD     L+C  C D V+D   +   V    T         +   R+R     +   +++
Sbjct: 30  VDSRSGSLYCQICDDFVWDPTLEELRVRKIGTG--------SFSGRKRKHDELFQDSIKD 81

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHN 233
               + N +   S  ++      GLRG+ N G TC+ N VLQ+  H P LRN++LSD H+
Sbjct: 82  DPRYITNNTTTASCRAN------GLRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHH 135

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQ 288
              CQ    V  CL+C +D MF   +  +    Y+ A  L  +W    +   NL + ++Q
Sbjct: 136 D--CQ----VSHCLSCAMDDMFQDFYALENTNGYTAANILSGFWISEKKAFENLVTTKEQ 189

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTF 347
           DAHEFF  + + +HE+   D  KP       C CI H+ F G +++   C  C   S + 
Sbjct: 190 DAHEFFQFLAEELHER-NGDGKKPEIGSEHSCNCIMHQTFYGKMQTTTTCQNCAGQSNSI 248

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
              +D SL LE      +K +  K                     TL  CLD     E +
Sbjct: 249 QSFLDLSLGLENVVQKRIKKTGLKKPSL-----------------TLQDCLDE----EYI 287

Query: 408 GSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPL 464
             D+ ++ C  C   Q++ +  SI++LP V    +KRFE+   R  + + KV   ++FPL
Sbjct: 288 KYDKCEYRCNNCSSIQQAKRHTSIKRLPNVLSIQLKRFEYRHGRHDRAASKVSNEVRFPL 347

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL 524
            L+M PY + +  RSR     F           E S  ++L +VV H G++D GHY +Y 
Sbjct: 348 QLNMLPYTNRA--RSRDSRENFEL---------ERSCTYDLLSVVVHVGEIDTGHYTSYC 396

Query: 525 RLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           R+ ++W+K +D  +   + + V  AQ Y++FY+ + L
Sbjct: 397 RVGDQWFKFNDHKVEMASLSDVLGAQAYLLFYIIRSL 433


>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
          Length = 799

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 181/365 (49%), Gaps = 64/365 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV-RLCLACDLDTMFSAI 258
           GL NLGNTCFMNSVLQ L HTPPL    LS    R +  + NG   + LA +L  +  ++
Sbjct: 39  GLQNLGNTCFMNSVLQLLVHTPPLAELLLSGGFGRVHNGAVNGFYPIQLAREL--VSRSL 96

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE-KVEKDQHKPRSQGN 317
               R P +P KF  S  R + +     Q+DAHEF I++LD +HE  +     KP S   
Sbjct: 97  AQTTRSPLAPMKFAKSLRRISRSFRLGRQEDAHEFLIALLDAMHEASIAGITPKP-SPEL 155

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
                 +R+F G +RS V C  CG+ S T+DPC+D SL++        + SS K      
Sbjct: 156 AQTSFIYRIFGGRMRSQVKCSECGYESNTYDPCIDLSLEI-------TRASSVKR----- 203

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                               L+ FT+ E L    K+ C + Q    ++K+M++   P V 
Sbjct: 204 -------------------ALEHFTKGEVLDGGNKYKCPRQQKAVRAVKRMTVDSAPNVL 244

Query: 438 CFHIKRFEHS-SVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
              +KRFE S S  K+S+K+D    F L LD+ P++S + L         P         
Sbjct: 245 MIQLKRFEFSFSGHKISKKID----FDLELDLGPFMSEAPL--------VP--------- 283

Query: 497 NEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
               + ++L+AV+ H+G  + +GHY  Y+R  N  W+ CDD  + +V E  V A + Y++
Sbjct: 284 ----ALYDLYAVLVHSGHSVHSGHYYAYVRAPNGIWHICDDTHVAQVAERQVMAQKAYIL 339

Query: 555 FYVQK 559
           FY+++
Sbjct: 340 FYLKR 344


>gi|320587228|gb|EFW99708.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
          Length = 524

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 219/469 (46%), Gaps = 65/469 (13%)

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           SH   V+     L+C  C D VYD   +   +    T    ++     RKR+  +   +S
Sbjct: 104 SHRFYVESRCGTLYCHMCDDFVYDPTLEELRLRKIGTGSFSTN-----RKRKHDEL--FS 156

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
             L++    + + + + S  +S      GLRG+ N G TC+ N +LQ   H P LRN++L
Sbjct: 157 DSLKDDPRYIASNTTLASCRAS------GLRGIYNAGATCYQNVILQCFLHNPLLRNFYL 210

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLA 283
           SD H    C++++    CL+C +D +F   +  +    Y+ A  L S+W    +  +NL 
Sbjct: 211 SDGHQSSLCEARH----CLSCAMDDVFQEFYGQESTNGYTAANILSSFWISERKAFANLV 266

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGF 342
           + ++QDAHEFF  + + +HE+   D  KP       C CI H+ F G ++S   C  C  
Sbjct: 267 TTKEQDAHEFFQFLAEELHER-NGDGKKPEHGSEHSCTCIVHQTFYGKMQSTTTCQQCNG 325

Query: 343 TSTTFDPCVDFSLDLEP--------NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
            +      +D SL LE          +G S   ++    H                  TL
Sbjct: 326 MTNQVQSFLDLSLGLESLAHRQRRLAKGLSAAAAAAGPPHRL----------------TL 369

Query: 395 MGCLDRFTRPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KM 452
             CLD     E + SD+ ++ C  C   + + +  SI+ LP V    +KRFE+   R   
Sbjct: 370 QQCLDE----EYIKSDKCEYRCHSCNSTRLARRHTSIKALPNVLSIQLKRFEYKQGRHDK 425

Query: 453 SRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
           + KVD  ++FPL L+M PY           NR    D  ES  LN  S  ++L +VV H 
Sbjct: 426 AAKVDTPVEFPLQLNMLPYT----------NRSRGQDVRESYELNR-SCMYDLLSVVVHV 474

Query: 513 GKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           G++D GHY++Y R+ ++W+  +D  +   + + V  A  Y++FY+ + L
Sbjct: 475 GEIDTGHYLSYCRVGDQWFAFNDHRVQLASNSEVLGANAYLLFYIIRSL 523


>gi|260946429|ref|XP_002617512.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
 gi|238849366|gb|EEQ38830.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
          Length = 515

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 230/512 (44%), Gaps = 97/512 (18%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           RC  C  SS   +  C+ C  V C+          +  KT S+  H  A+D     L C 
Sbjct: 78  RCTECRGSSGQAMI-CLQCPHVGCY----------NHAKTHSSRGHRFAIDSANGLLHCF 126

Query: 125 ACRDQVYDRDFDAAVVLAHTT--SII--QSSKPENLRKRRRIDYRPWSPDLRERSLMVNN 180
           +C D V  R         HT   S+I  ++ K +     +       S DL         
Sbjct: 127 SCGDYVSHRAL-------HTIRKSLISKKADKSDEAGAAKVNGNTNGSADL--------- 170

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPL-RNYFLSDRH------- 232
           A   D+ +        GLRG+ NLG TCFM+ +LQ L H P + R++F +D H       
Sbjct: 171 AIADDAYTKPPASAVHGLRGIVNLGATCFMSCILQTLLHNPLVCRHFFNNDLHFFNCDSS 230

Query: 233 NRYYCQSK--NGVRLCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQD 289
           +RY   S   +    C+ C LD +F  ++    R     A  L + W    +LA +++QD
Sbjct: 231 SRYAAPSPQIDENSACMTCSLDAVFKEVYTSSARDGCGIATLLATAWYKNQSLAGFQEQD 290

Query: 290 AHEFFISMLDGIH---EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTT 346
           AHEF+  +L  +H   E+V +    P+       C+ H  F+G L S V+C ACG  + T
Sbjct: 291 AHEFWQFLLGELHSDYERVAESAGLPQEPCR---CVVHSTFAGQLESSVVCSACGAITRT 347

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            DP +D SL++                            S+  G +TL  CLD+FTR E 
Sbjct: 348 VDPLMDLSLEI----------------------------SRLDGKATLYDCLDQFTRHEP 379

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSL 466
           L  D K+ C  C+   ++ + + I+ LP V    +KRF+H+     + K++  +  PL L
Sbjct: 380 L--DAKYRCSSCREEAQAHRALRIKALPPVISIQLKRFKHTVGSDTASKIEARVDAPLFL 437

Query: 467 DMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL 526
           +++ Y S               D  ++N +      +ELFAVV H G +  GHY+  ++ 
Sbjct: 438 NLSKYASQHD------------DDIDANKV------YELFAVVNHVGSVSTGHYIALVKS 479

Query: 527 S-NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           S  +W+K DD+ I+ V+   V+A   Y++FY+
Sbjct: 480 SGGRWFKFDDSVISLVSHEEVQATNAYLLFYI 511


>gi|50548343|ref|XP_501641.1| YALI0C09438p [Yarrowia lipolytica]
 gi|49647508|emb|CAG81946.1| YALI0C09438p [Yarrowia lipolytica CLIB122]
          Length = 526

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 193/450 (42%), Gaps = 131/450 (29%)

Query: 182 SPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN 241
           +P  S +  +    RGLRGL N+G TCFM+ ++Q L H P +RN FL+  H+   C  K 
Sbjct: 130 TPPSSFTQPSISSTRGLRGLVNMGATCFMSVIVQTLIHNPLIRNDFLAQNHSLGLCALKR 189

Query: 242 GV---------------------------------------------RLCLACDLDTMFS 256
            +                                               C+AC LD  FS
Sbjct: 190 AIADGTITYSDFCDYYEELPETIQRESRDLPLSTLITWANATLSPNPNNCIACALDDCFS 249

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE----KVEKDQHK 311
             +    +  Y P   + S W     LA Y QQDAHEF+  +++ +H     +VE+   +
Sbjct: 250 KFYASATVQGYGPVSLMISSWNINRQLAGYSQQDAHEFWQFLVNELHGSSLVRVEEGLDE 309

Query: 312 PRSQGN----------------GDC-------CIAHRVFSGILRSDVMCMACGFTSTTFD 348
            R   +                G C       CI+HR F G L+S   C  C  TS T+D
Sbjct: 310 DRGASSDIPVQFKNTWDSISESGSCSDTSDCTCISHRTFGGTLQSTATCNGCSHTSHTYD 369

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P +D SL + P +G +                            +L  CLD++T PE++ 
Sbjct: 370 PLMDLSLQI-PLKGQA----------------------------SLSSCLDKYTAPEQM- 399

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
              ++FC+ C+  +   K ++++K P+V  F +KRF+H+     S K+D +++FPL LDM
Sbjct: 400 ---EYFCENCKSHESVSKTLALKKPPVVLSFQLKRFQHTG--SSSSKIDTHVEFPLYLDM 454

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN 528
           +PY  S                       E    +EL+AVV H G L+ GHY   ++  +
Sbjct: 455 SPYTCS----------------------QESGLVYELYAVVCHHGSLNTGHYTCMVKGRD 492

Query: 529 -KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
             WY  DD  IT V+   V AA+ Y++FY+
Sbjct: 493 MHWYNFDDVTITRVDVQQVLAARAYLLFYI 522


>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
           [Strongylocentrotus purpuratus]
          Length = 503

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 222/508 (43%), Gaps = 72/508 (14%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           C VC  +  P  + C+AC  V C       +V  HA K      H  +++ +   ++C  
Sbjct: 31  CAVCRSNKNP--WMCLACGVVLC-----GRYVNGHAKKHYEENQHSASINCENLAVYCYV 83

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPID 185
           C D   + +      + H    +Q+    NL+  +++  +  + D+    +   +  P  
Sbjct: 84  CDDHALNDN--KTETIKHVRQFLQAKV--NLQYEKQL--KTLTGDVAGDHI---DGPPRK 134

Query: 186 SMSS-SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
            +++ +  ++P    GL NLGNTCFMN+VLQ+L +      YF              G R
Sbjct: 135 KLAANTRANIP----GLRNLGNTCFMNAVLQSLSNINQFCGYFKDLPAVELRSGKTAGKR 190

Query: 245 L-----------CLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
           +            L  ++     A++ GD+   SP       W+       Y+QQDAHEF
Sbjct: 191 IYNTRNMKHDDVSLVEEIRKTLCALWQGDQTAISPDSLFTVMWKIFPRFRGYQQQDAHEF 250

Query: 294 FISMLDGIHEKVEKDQH--KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
              +LD +H +++       P+ Q NG   I   +F G+L S+V C  CG      DP +
Sbjct: 251 MRYLLDRLHTELQGSTWPTTPKKQTNGHATIVSVIFGGLLLSEVTCRPCGSLYKKIDPFL 310

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLD+        K              DG   SQ C    L  C+  F   E L   +
Sbjct: 311 DVSLDIPERFRPRSKNK------------DG---SQVC---RLQDCMQSFIAVEELEETE 352

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAP 470
           ++ C +CQ RQ S K+  ++ +P V C H+KRF  S    +  K+D Y+QFP+  LD+ P
Sbjct: 353 QYMCPKCQQRQPSTKKFWLKAIPNVLCIHLKRFTWSGF--LRTKIDTYVQFPMKGLDIQP 410

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNK 529
           ++                 G E    N  ++ ++L AV+ H G    AGHY+ +   + +
Sbjct: 411 FML----------------GPECQDENVSTTVYDLAAVIVHQGSGAGAGHYIAFAVNNGQ 454

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYV 557
           WY  +D+ +T V E  +   + Y++FYV
Sbjct: 455 WYCFNDSTVTPVEEKVITRCKAYILFYV 482


>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
           magnipapillata]
          Length = 503

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 239/530 (45%), Gaps = 75/530 (14%)

Query: 50  PGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSAC- 108
           P   + +  ++  +  C VC  +  P  + C+ C  V C       +V  HA   S +C 
Sbjct: 14  PAFVSRLMNENRNLWSCSVCKTNKSP--WMCLKCGEVLC-----GRYVNGHAKMHSESCA 66

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRR--IDYRP 166
           SH + +D     +FC  C D + +      + L  T   +Q+  P   +++RR  ID + 
Sbjct: 67  SHNVCIDASLM-VFCYKCDDFIINDTSTGDINLIRTA--LQNEIPRIQKRKRRQSIDQQL 123

Query: 167 WSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNY 226
                +E  +   N SP     + N     GLR   NLGNTCFMN++LQ+L +      Y
Sbjct: 124 ----SKESPMKKLNRSPSKENKAGNNVRTVGLR---NLGNTCFMNAILQSLSNLKYFSGY 176

Query: 227 F------------LSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFC-GDRMPYSPAKFLY 273
           F            + ++  +YY +S     + L  +L  +  A++  G     SP     
Sbjct: 177 FKELPAIELNVKNMDEQTKKYYTRSYQSDDISLVEELRKVLCALWQQGSNTAISPESLFT 236

Query: 274 SWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRS 333
             W+       Y+Q DAHEF   +LD +H ++       +   NG   I   +F G L+S
Sbjct: 237 VVWKVVPRFRGYQQHDAHEFMHCLLDRVHNELLTS----KRFTNGCDTIISGIFGGQLQS 292

Query: 334 DVMCMACGFTSTTFDPCVDFSLDL--EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGI 391
           DV C+ CG  S   +   D SLD+  +P     +KTS  K      C+            
Sbjct: 293 DVTCLTCGTISKKQEAYRDLSLDIPFKP----KLKTSPGKKKTPSACQ------------ 336

Query: 392 STLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRK 451
             L+ CL  F   E L   + + C++C  +Q S K+  I +LP V C H+KRF +S + +
Sbjct: 337 --LIDCLQSFVEMETLDESEWYMCEKCNKKQPSTKKFWILRLPNVLCLHLKRFRYSPLAR 394

Query: 452 MSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVT 510
              KVD +++FP+  L+M P+    IL++            ++N ++  +  ++L A V 
Sbjct: 395 T--KVDTFVRFPIKELNMDPF----ILKT----------NQKTNRMSIKAHLYDLAACVV 438

Query: 511 HTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           H G    +GHY TY R    WY  +D+ ++  NE +++  + Y++FY ++
Sbjct: 439 HHGSGAGSGHYTTYARHEGSWYNFNDSSVSLTNEESIQHCKAYILFYTRQ 488


>gi|296235613|ref|XP_002762974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
           [Callithrix jacchus]
          Length = 603

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 198/430 (46%), Gaps = 57/430 (13%)

Query: 20  PQPCPHLADFH-ARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLY 78
           P  C H+  F   +N  K  R I          G    R+  ++   C VC  +   RL+
Sbjct: 192 PTGCSHVESFKVGKNWQKNLRLIYQRFVWS---GTPETRKRKAKSCICHVCS-THMNRLH 247

Query: 79  ACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAA 138
           +C++C    C       H+  HA        H +AVD+    ++C  C+D VYD+D +  
Sbjct: 248 SCLSCVFFGCFT---EKHIHRHAETKQ----HHLAVDLYHGVIYCFMCKDYVYDKDIE-- 298

Query: 139 VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD----- 193
                   I + +K + LR          S D+  +  M +      ++  +        
Sbjct: 299 -------QIAKETKEKILRFLTST-----STDVSHQQFMTSGIEDKQAICETKEQEPKLV 346

Query: 194 -----------LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
                         GLRGL NLGNTCFMN ++QAL H P L+++FLSD+H          
Sbjct: 347 KPKKKRRKKSVYTVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIM----TS 402

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
             LCL C++ ++F A++ G R P+ P K L+  W HA +LA Y QQDAHEF I++LD +H
Sbjct: 403 PSLCLVCEMSSLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH 462

Query: 303 EKVEKDQHKPRSQGNGDC--CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            +  KD    +   N +C  CI  ++F+G L+SDV C  C   STT DPC D SLDL P 
Sbjct: 463 -RHSKDDSGGQETNNPNCCNCIIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDL-PG 520

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLD--RFTRPERLGSDQKFFCQQC 418
             ++  + + +   S     D +      GI +L  CL    +T   R   DQ F C   
Sbjct: 521 SCATFDSQNPERADSTVSREDHIP-----GIPSLTDCLQCGHYTSFIRQQKDQWFSCDDA 575

Query: 419 QVRQESLKQM 428
            + + +++ +
Sbjct: 576 IITKATIEDL 585



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 500 SSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           S E  +  + + T  L  GHY +++R   ++W+ CDDA IT+     +  ++GY++FY +
Sbjct: 538 SREDHIPGIPSLTDCLQCGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHK 597

Query: 559 KML 561
           + L
Sbjct: 598 QGL 600


>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
 gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
          Length = 522

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 245/543 (45%), Gaps = 103/543 (18%)

Query: 66  CGVCGDSSCPRLYACMACAAVSC------HVPPH--------SSHVAIHATKTSSACSHE 111
           C VC  +  P  + C+ C++V C      H   H        SSH     T+      H 
Sbjct: 29  CSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQAPLSSHKRQEKTEKERT-QHT 85

Query: 112 IAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWS 168
           + +D      +C  C D V +      +  V  H  ++  S+   E  RKR+ ++    S
Sbjct: 86  VCMDCSSYSTYCYRCDDFVVNDTKLCLIQKVREHLQNLENSAFTAERHRKRKFLE----S 141

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FH 219
             L ++ L VN ++     +           GL NLGNTCFMN++LQ+L         F 
Sbjct: 142 ASLSKKLLKVNGSTTALCAT-----------GLRNLGNTCFMNAILQSLSNIQQFCCYFK 190

Query: 220 TPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWW 276
             P   LRN   + R   Y+ +S+  V + L  +      A++ G++  +SP    Y  W
Sbjct: 191 ELPAVELRNGKTAGRRT-YHTRSQGDVNVSLVEEFRKTLCALWQGNQTAFSPESLFYVVW 249

Query: 277 RHASNLASYEQQDAHEFFISMLDGIHEKVEKD----QHKPRSQGN------GDCCI---- 322
           +   N   Y+QQDAHEF   +LD +H +++ +     H   SQ N        CCI    
Sbjct: 250 KIMPNFRGYQQQDAHEFMRYLLDHLHLELQGEFDGSSHSVLSQANCSRSVSNKCCINGAS 309

Query: 323 --AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEA 380
                VF G+L+++V C+ CG  S  FDP +D SLD+ P+Q  + +  + ++  +C    
Sbjct: 310 TVVTSVFGGVLQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRCKNQENGPTC---- 364

Query: 381 DGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFH 440
                       TL  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H
Sbjct: 365 ------------TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLH 412

Query: 441 IKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           +KRF  ++   +  KVD Y+ FPL  LDM  +L                   E   +   
Sbjct: 413 LKRFHWTAY--LRNKVDTYVDFPLRGLDMKSFLL------------------EPENIGPE 452

Query: 500 SSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T   E TV  A+ Y++FYV+
Sbjct: 453 SCLYDLEAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEETVAKAKAYILFYVE 512

Query: 559 KML 561
           + +
Sbjct: 513 RQV 515


>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
          Length = 520

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 159/568 (27%), Positives = 249/568 (43%), Gaps = 109/568 (19%)

Query: 43  DCLHIKPPGGRAAIRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------H 89
           +C H+   G    I  DS++ P+       C VC  +  P  + C+ C++V C      H
Sbjct: 2   ECPHL---GSSVCIAPDSAKFPQGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGH 56

Query: 90  VPPHSSHVAI-----HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLA 142
              H     I       T+      H + +D      +C  C D V +      V  V  
Sbjct: 57  AKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVRE 116

Query: 143 HTTSIIQSS-KPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGL 201
           H  ++  S+   +  RKR+ ++    +  L  + L VN ++     +           GL
Sbjct: 117 HLQNLENSAFTSDRHRKRKLLE----NSSLNSKLLKVNGSTTALCAT-----------GL 161

Query: 202 NNLGNTCFMNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLAC 249
            NLGNTCFMN++LQ+L         F   P   LRN   + R   Y+ +S+    + L  
Sbjct: 162 RNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVE 220

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD- 308
           +      A++ G +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++   
Sbjct: 221 EFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGF 280

Query: 309 ---------QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
                    Q       +  CCI         +F GIL+++V C+ CG  S  FDP +D 
Sbjct: 281 NGVSRSVILQENSSLTASSKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDL 340

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SLD+ P+Q  + +T + ++   C                TL  CL  FT  E L   + +
Sbjct: 341 SLDI-PSQFRNKRTKNQENGPMC----------------TLRDCLRSFTDLEELDETELY 383

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYL 472
            C +C+ +Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL
Sbjct: 384 MCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL 441

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWY 531
                              E       S  ++L AVV H G  + +GHY  Y     +W+
Sbjct: 442 L------------------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHEGRWF 483

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQK 559
             +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 484 HFNDSTVTLTDEETVVKAKAYILFYVER 511


>gi|50305101|ref|XP_452509.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641642|emb|CAH01360.1| KLLA0C06974p [Kluyveromyces lactis]
          Length = 446

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 235/547 (42%), Gaps = 117/547 (21%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+      N       +++C  ++     A  +  +    RC  CG+ SC   + C+ 
Sbjct: 3   CPHMNQV-VSNQKLGDAVLKECETVRYLLRHADFKNRTMRTMRCMDCGEISCGSTFICLQ 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    +++H   H+ K      H   V+     +FC  C D  +  D  A +  +
Sbjct: 62  CGFCGC---WNNNHFLDHSQKLG----HIFGVNSSNGLVFCFRCGD--FMADLVAEIPAS 112

Query: 143 HTTSIIQSSK-PENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGL 201
              ++++ ++ P +L +                                      GL+GL
Sbjct: 113 QWDTVMEKTELPASLHRD-------------------------------------GLQGL 135

Query: 202 NNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM---FSAI 258
            N+G+TCFM+S++Q + H P      LS +H    C  K+G + C++C LD +   F   
Sbjct: 136 VNMGSTCFMSSIIQTIIHNPYFVEDLLSHKHCNN-CDIKSGTK-CVSCALDEIACDFYGN 193

Query: 259 FCGDRMPYSPAK----FLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHK 311
             G     S +K     L + W    +L    QQDAHE++  +L+ +H    +V      
Sbjct: 194 GPGTGKSSSVSKGFVNLLSASWHINHHLVGSSQQDAHEYWQFLLNQLHTDHARVFGSSKA 253

Query: 312 PRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
           P  Q     CI HR+F G L++ + C  CGF+ TT DP +D SL+++ N           
Sbjct: 254 PDCQ-----CITHRIFQGYLKNTLQCSQCGFSKTTIDPIMDLSLEIKNN----------- 297

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
                                 L  CLD F R E L +D  + CQ C+  Q  +KQ+++ 
Sbjct: 298 --------------------PKLEDCLDHFQREETL-TDFHYECQSCKQNQGVVKQLTLH 336

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           K P V    +KRFEH  +   S K++  +QFPL L++ P+L             F  + +
Sbjct: 337 KAPNVLVIQLKRFEH-QLNGQSAKLNDRVQFPLHLNLKPHL-------------FQIEDE 382

Query: 492 ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQ 550
                  P+  ++L  VV+H G +D GHY T  +  + +W+K +D+ +T V E  V   Q
Sbjct: 383 YI-----PNIAYDLLNVVSHQGTVDQGHYTTVSKTEDGQWFKFNDSVVTSVTEEQVLEQQ 437

Query: 551 GYMMFYV 557
            Y++FY+
Sbjct: 438 AYLLFYI 444


>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
          Length = 520

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 244/553 (44%), Gaps = 104/553 (18%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSSKPEN 155
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQEKIQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAYTAD 129

Query: 156 LRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQ 215
             ++R++     +  L  + L VN ++     +           GL NLGNTCFMN++LQ
Sbjct: 130 RHRKRKL---LENSSLNSKLLKVNGSTAAICAT-----------GLRNLGNTCFMNAILQ 175

Query: 216 AL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR 263
           +L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G +
Sbjct: 176 SLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDTSVSLVEEFRKTLCALWQGSQ 234

Query: 264 MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPR 313
             +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q    
Sbjct: 235 TAFSPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAVLQENST 294

Query: 314 SQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
              +  CC+         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++
Sbjct: 295 LSASSKCCVNGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS 353

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
                            + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+
Sbjct: 354 ----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKK 397

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFF 486
             I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL              
Sbjct: 398 FWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------LE 443

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENT 545
           P + D  N L      ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E T
Sbjct: 444 PENSDPENCL------YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEET 497

Query: 546 VRAAQGYMMFYVQ 558
           V  A+ Y++FYV+
Sbjct: 498 VGKAKAYILFYVE 510


>gi|400261275|pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
           Delta-Znf)SUS1SGF73 Dub Module
 gi|400261279|pdb|4FIP|E Chain E, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
           Delta-Znf)SUS1SGF73 Dub Module
 gi|400261291|pdb|4FK5|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
          Length = 476

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 233/554 (42%), Gaps = 110/554 (19%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 9   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSVPKEKFLNTMKCGTCHEINSGATFMCLQ 67

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++ +   LFC  C D + + D     +LA
Sbjct: 68  CGFCGCW---NHSHFLSHSKQIG----HIFGINSNNGLLFCFKCEDYIGNIDLINDAILA 120

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 121 --------------KYWDDVCTKTMVPSMERRD---------------------GLSGLI 145

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           N+GNTCFM+S+LQ L H P    + +S  H+   C+ ++  + C +C LD +   ++   
Sbjct: 146 NMGNTCFMSSILQCLIHNPYFIRHSMSQIHSN-NCKVRSPDK-CFSCALDKIVHELYGAL 203

Query: 263 RMPYSPAK---------FLYSW---WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
               + +          F+Y     W+   NLA Y QQDAHEF+  +++ IH+    D  
Sbjct: 204 NTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLP 263

Query: 311 KPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSM 365
             +      N  C CI H VF G L S ++C  C   S TT DP +D SLD++  +    
Sbjct: 264 NAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKK---- 319

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                       L  CLD F + E+L  D  + C +C   Q+++
Sbjct: 320 ---------------------------KLYECLDSFHKKEQL-KDFNYHCGECNSTQDAI 351

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ+ I KLP V    +KRFEH  +   +RK+D +++FP  L+M  Y S+           
Sbjct: 352 KQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTK---------- 400

Query: 486 FPFDGDE-SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNE 543
              + D+ S     P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ ++ +++
Sbjct: 401 ---EKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSMVSSISQ 457

Query: 544 NTVRAAQGYMMFYV 557
             V   Q Y++FY 
Sbjct: 458 EEVLKEQAYLLFYT 471


>gi|401626223|gb|EJS44179.1| ubp8p [Saccharomyces arboricola H-6]
          Length = 473

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 235/562 (41%), Gaps = 116/562 (20%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 4   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSKPKEKFINTMKCGTCHEINSGSTFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++ +   LFC  C D + + D     +LA
Sbjct: 63  CGFCGCW---NHSHFLSHSKQVG----HIFGINSNNGLLFCFKCEDYLGNIDLINDAILA 115

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 116 --------------KYWDDVSTKTMVPAMERRD---------------------GLSGLI 140

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR---LCLACDLDTMFSAIF 259
           N+G+TCFM+S+LQ L H P    YF+    N+ +  +K  VR    C +C LD +   ++
Sbjct: 141 NMGSTCFMSSILQCLIHNP----YFIRHSMNQAH-SNKCKVRSPDKCFSCALDKIVHELY 195

Query: 260 --CGDRMPYSPAK-------FLYSW---WRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
                  P+S +        F+Y     W+   NLA Y QQDAHEF+  +++ IH+    
Sbjct: 196 GVLNTDKPFSSSSATNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 255

Query: 308 DQHKPR---SQGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQG 362
               P+   S  +  C CI H VF G L S ++C  C   S TT DP +D SLD++  + 
Sbjct: 256 SLENPKEAESANDKHCDCIVHTVFEGSLESSIVCPGCQNNSKTTIDPFMDLSLDIKDKK- 314

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                          L  CLD F + E L  D  + C +C   Q
Sbjct: 315 ------------------------------KLYECLDSFHKKELL-KDFNYHCGKCNSTQ 343

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR-- 480
           +++KQ+ I KLP V    +KRFEH  +   +RK+D +++FP  L+M  Y S     S   
Sbjct: 344 DAIKQLGIHKLPSVLVLQLKRFEH-LLNGTNRKLDDFIEFPTYLNMKSYCSKGESESEKH 402

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWIT 539
            GN               P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ ++
Sbjct: 403 IGNG------------KVPDIIYELIGIVSHRGTVNEGHYIAFCKISGGQWFKFNDSMVS 450

Query: 540 EVNENTVRAAQGYMMFYVQKML 561
            +++  V   Q Y++FY  + +
Sbjct: 451 SISQEGVLKEQAYLLFYTVRQV 472


>gi|156373862|ref|XP_001629529.1| predicted protein [Nematostella vectensis]
 gi|156216531|gb|EDO37466.1| predicted protein [Nematostella vectensis]
          Length = 452

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 225/508 (44%), Gaps = 84/508 (16%)

Query: 68  VCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHA-TKTSSACSHEIAVDVDRAELFCCAC 126
           VC     P  + C+ C  V C       +V  HA +       H + +D   A  FC +C
Sbjct: 1   VCRSFKSP--WICLRCGIVHC-----GRYVNAHAKSHCEKYPQHSVCLDQSLAA-FCYSC 52

Query: 127 RDQVYDRDFDAAVVLAHTTSII--QSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
            D+    D     V      I+  Q+ + EN +K+R I           R+  + N   I
Sbjct: 53  -DEFIINDTKGGDVQRVREIILERQNREAENAKKKRLIS----------RTRFLRNQQNI 101

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF-----------LSDRHN 233
             +        + L GL NLGNTCFMN+VLQ+L +      YF            S   N
Sbjct: 102 GRI--------KQLPGLRNLGNTCFMNAVLQSLSNIQTFSCYFKDLPAFELRTDTSCEKN 153

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
            Y+ +S+     CL  +L  +  A++ G+ + +SP     + W+       Y+QQDAHEF
Sbjct: 154 PYFTRSRKSDDGCLVEELRKVLCALWQGNCVSHSPEALFSTVWKVVPRFRGYQQQDAHEF 213

Query: 294 FISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
              ++D +H ++   Q     Q      I   +F GIL+S+V C+ C   S   DP +D 
Sbjct: 214 MHYLMDRLHTELLLSQKACFGQDT----IVTGIFGGILQSEVTCLTCMTESRKLDPFLDL 269

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SL++ P      +T   KS  +  C+              L  C+  F   E+L   + +
Sbjct: 270 SLEIPPE----FQTRKAKSRENPFCQ--------------LEDCMKHFVALEKLAESELY 311

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYL 472
            C +C+ +++S K+  I++LP V C H+KRF   +   +  K+D Y+QFP+  LDM+PY 
Sbjct: 312 MCLKCKKKEQSTKKFWIQRLPNVLCLHLKRFRFQAF--LRSKIDTYVQFPIRGLDMSPY- 368

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWY 531
                            G E     +P   ++L AVV H G  + AGHY T+      WY
Sbjct: 369 --------------TLKGQEKGE-TKPVL-YDLAAVVVHHGSGVSAGHYTTFAFHDGAWY 412

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQK 559
             +D+ ++ ++E  V   +GY+ FY ++
Sbjct: 413 NFNDSSVSRIDEEMVAKCKGYIFFYTRR 440


>gi|448524262|ref|XP_003868958.1| Ubp8 protein [Candida orthopsilosis Co 90-125]
 gi|380353298|emb|CCG26054.1| Ubp8 protein [Candida orthopsilosis]
          Length = 543

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 227/514 (44%), Gaps = 113/514 (21%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           +C  C  S   ++  C+ C  V C     + H  +H   TS    H  A+D     L+C 
Sbjct: 118 KCTNCEVSDFDQVMICLQCPNVGC-----AEHSQLHYKGTS----HMFAIDSSLGLLYCF 168

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
            C + +                    + PE  + R  +        +    + ++N   I
Sbjct: 169 KCNEYI--------------------NHPELEKLRLEV--------MGIADVAIDNQEAI 200

Query: 185 DS-MSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC-----Q 238
           ++  +S N    +GL+G  NLG TCFM+S LQ L H P +++ F ++  + + C     Q
Sbjct: 201 NANYTSPNKLAAQGLKGFVNLGATCFMSSTLQTLVHNPIIKSQFFNNDLHYFNCKYLHDQ 260

Query: 239 SKNG----VRLCLACDLDTMFSAIFCG-DRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
             NG       C+ C +D +F  +F       +     L + W    +LA +++QDAHEF
Sbjct: 261 DVNGNIGEQNACITCSIDLIFKELFTSKSNEGFGITNLLTTAWYKQKSLAGFQEQDAHEF 320

Query: 294 FISMLDGIHEKVEKDQHKPRSQGNGD------CCIAHRVFSGILRSDVMCMACGFTSTTF 347
           +  +L+  H+    D  + ++Q +         CI H  FS  L+S V C +C   + T 
Sbjct: 321 WQFVLNEFHQ----DHMRIQTQLDAIPKEETCTCITHSTFSFELQSCVKCKSCEAVTETV 376

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
           DP +D SL++               NH        +   QN     L  CLD FT  E+L
Sbjct: 377 DPMIDLSLEI---------------NH--------LKKQQNVD---LYDCLDLFTSEEKL 410

Query: 408 GSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLD 467
             D    C+QC  R ++ K + ++ +P V    +KRF H+ +   S KV+  ++ PL L+
Sbjct: 411 --DAMISCKQCSTRSQATKTLKLKSIPPVLSIQLKRFNHNILNDTSSKVETPVKVPLYLN 468

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE---FELFAVVTHTGKLDAGHYVTYL 524
           +APY                       ++N+ S++   +ELF+V+ H G ++ GHYV + 
Sbjct: 469 IAPY-----------------------SVNQGSAKDIVYELFSVICHIGSVNTGHYVVFT 505

Query: 525 R-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           +  S +W K DD+ ++ V +  V  +  Y+++Y+
Sbjct: 506 KNASGQWLKFDDSVVSIVEQKEVVNSNAYLLYYI 539


>gi|402581201|gb|EJW75149.1| ubiquitin carboxyl-terminal hydrolase, partial [Wuchereria
           bancrofti]
          Length = 268

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/270 (40%), Positives = 150/270 (55%), Gaps = 22/270 (8%)

Query: 210 MNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPA 269
           MN ++QA+ HTP L++YFL+D+H+     S +  + CL C+L   F   + GD  PY P 
Sbjct: 1   MNCIIQAIVHTPHLKDYFLTDQHHCASSSSHSKAQ-CLMCELANTFQEFYKGDVTPYKPN 59

Query: 270 KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSG 329
           +FL   W HA +LA YEQQDAHEFFI+ LD +H           S  N   CI   +F+G
Sbjct: 60  RFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHR--HSGSSSLPSTPNECNCIIDWIFTG 117

Query: 330 ILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNC 389
            L+SD+ C  CG  STT DP  D SLD+      S  +SS                    
Sbjct: 118 KLQSDLTCSICGCVSTTVDPFWDISLDVAQEVLRSPSSSSGSPQQI-------------- 163

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
              TL  CL R+  PE LGS+ K  C +C+  +ES KQ++++ LP+V+CFH+KRFEHS  
Sbjct: 164 ---TLEDCLHRYIMPEHLGSNAKTKCARCETYEESTKQLTLKTLPMVACFHLKRFEHS-- 218

Query: 450 RKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
            K  +K+D  +++P  +DM P+ +S   RS
Sbjct: 219 HKDRKKMDTKIKYPQFIDMTPFTASFRERS 248


>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
           guttata]
          Length = 640

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 237/535 (44%), Gaps = 97/535 (18%)

Query: 68  VCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI-----HATKTSSACSHEIAVDV 116
           VC  +  P  + C+ C++V C      H   H     I       T+      H + +D 
Sbjct: 151 VCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDC 208

Query: 117 DRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSL 176
                +C  C D V +   D  + L            E+L+      +   S   R+R L
Sbjct: 209 SSYSTYCYRCDDFVVN---DTKLGLVQKVR-------EHLQNLENSAFT--SDRHRKRKL 256

Query: 177 MVNNA--SPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP--- 222
           + N+   S +  ++ SN  L     GL NLGNTCFMN++LQ+L         F   P   
Sbjct: 257 LENSTLNSKLLKVNGSNAALC--ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVE 314

Query: 223 LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNL 282
           LRN   + R   Y+ +S+    + L  +      A++ G++  +SP    Y  W+   N 
Sbjct: 315 LRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNF 373

Query: 283 ASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHRV 326
             Y+QQDAHEF   +LD +H +++            Q       +  CCI         +
Sbjct: 374 RGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAI 433

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSS 386
           F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +T + +S   C          
Sbjct: 434 FGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRTKNQESGPMC---------- 482

Query: 387 QNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
                 TL  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF  
Sbjct: 483 ------TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHW 536

Query: 447 SSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
           ++   +  KVD Y++FPL  LDM  YL                   E       S  ++L
Sbjct: 537 TAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYDL 576

Query: 506 FAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 577 VAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVER 631


>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
           griseus]
          Length = 502

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 242/548 (44%), Gaps = 99/548 (18%)

Query: 56  IRRDSSEVPRCGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI-----HATKT 104
           + R    +    VC  +  P  + C+ C++V C      H   H     I       ++ 
Sbjct: 1   MERSRGILTLVSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLLNHKRSEK 58

Query: 105 SSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRR 161
                H + +D      +C  C D V +      V  V  H  ++  S+   +  RKR+ 
Sbjct: 59  QEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKL 118

Query: 162 IDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---- 217
           ++    +  L  + L VN ++     +           GL NLGNTCFMN++LQ+L    
Sbjct: 119 LE----NSSLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIE 163

Query: 218 -----FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPA 269
                F   P   LRN   + R   Y+ +S+    + L  +      A++ G +  +SP 
Sbjct: 164 QFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPE 222

Query: 270 KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD-QHKPRSQ---------GNGD 319
              Y  W+   N   Y+QQDAHEF   +LD +H +++      PRS           N  
Sbjct: 223 SLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVPRSSILQENSTLSANNK 282

Query: 320 CCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
           CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ + +S 
Sbjct: 283 CCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKNQESG 341

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
             C                +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KL
Sbjct: 342 PVC----------------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKL 385

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDE 492
           P V C H+KRF  ++   +  KVD Y++FPL  LDM  YL                   E
Sbjct: 386 PKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------E 425

Query: 493 SNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQG 551
              +   S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ 
Sbjct: 426 PENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTVTDEETVGKAKA 485

Query: 552 YMMFYVQK 559
           Y++FYV++
Sbjct: 486 YILFYVER 493


>gi|302308938|ref|NP_986098.2| AFR551Wp [Ashbya gossypii ATCC 10895]
 gi|299790865|gb|AAS53922.2| AFR551Wp [Ashbya gossypii ATCC 10895]
          Length = 469

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 231/562 (41%), Gaps = 125/562 (22%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+     +        +++C+ ++        +       RC  C   +C   + C+ 
Sbjct: 4   CPHMEQV-IQTAKVGDAVVKECITVRYLIRNCDAKSRYLRAMRCSECFQINCGSSFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C  V C    H  H   H+ K      H   V+     LFC  CRD + D +F       
Sbjct: 63  CGFVGCWNESHFLH---HSKKVG----HIFGVNATNGLLFCFRCRDYISDNEF------- 108

Query: 143 HTTSIIQSSKPENLRKRRRIDYRP--WSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                              +D  P  W+  LR  S+   +                GL G
Sbjct: 109 -----------------VHMDIMPKHWNEVLRRSSIPAPHRG-------------EGLLG 138

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF- 259
           L N+G+TCFM+SV+Q   H P +  Y L +R +   C  ++ +  C++C +D + + ++ 
Sbjct: 139 LVNMGSTCFMSSVIQTFLHLPHVLQYML-ERLHYATCDVQDSLS-CISCAVDEIVANLYG 196

Query: 260 -------CGDRMPYSPAK---------------FLYSWWRHASNLASYEQQDAHEFFISM 297
                   G   P +  +                L   W+   NLA Y QQDAHEF+  +
Sbjct: 197 QVKEEAASGVAGPGASTQALSQSLSKQQQGFINLLTCSWKINRNLAGYSQQDAHEFWQFL 256

Query: 298 LDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC-GFTSTTFDPCVDFSLD 356
           L+ +H    +  H P S+ +   CI H +F G L S ++C  C G   TT DP +D SL 
Sbjct: 257 LNQLHTDYIRI-HGPPSKKSACGCILHMLFQGYLESSIVCSECHGNNKTTVDPIMDLSLG 315

Query: 357 LEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQ 416
           ++                                 STL  CLD F R E L +D  + C+
Sbjct: 316 IQNK-------------------------------STLHECLDSFHRRESL-TDFNYCCK 343

Query: 417 QCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI 476
            C      ++Q+S+ KLP V    +KRFEH  +   S K++ Y+ FPL L+M  Y     
Sbjct: 344 NCMSTSNPIRQLSMAKLPPVLMLQLKRFEH-LINGTSVKINDYISFPLHLNMKDYCK--- 399

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDD 535
                     P D         P+  F+L A+++H G +D GHY T  R++ + W K +D
Sbjct: 400 ----------PMDDQHP----VPNMTFKLSAIISHQGTVDKGHYTTICRINGDVWAKFND 445

Query: 536 AWITEVNENTVRAAQGYMMFYV 557
           + +T ++E  +   Q Y+++YV
Sbjct: 446 SMVTLISEEDMLKEQAYLLYYV 467


>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 511

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 242/552 (43%), Gaps = 112/552 (20%)

Query: 59  DSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPH---SSHVAIHAT 102
           DSS  P        C VC  +  P  + C+ C  V C      H   H   +  V +   
Sbjct: 15  DSSRFPNGTPSSWCCSVCRSNKSP--WICLTCLVVHCGRYVNGHAKKHFEETQAVGVSQR 72

Query: 103 KT----SSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA--HTTSIIQSSKPENL 156
           K          H + +D     +FC  C D V +      V  A  H  S+   +   + 
Sbjct: 73  KNDKQEKEKYHHCVCMDCSSYSVFCYRCDDFVVNDTKLGQVQKAREHLQSLETITSMSDR 132

Query: 157 RKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQA 216
           +++R++                 + +P   +     D  R   GL NLGNTCFMN++LQ+
Sbjct: 133 QRKRKLQ---------------ESLAPDSKLVKERWDCSR-CTGLRNLGNTCFMNAILQS 176

Query: 217 LFHTPPLRNYF-----LSDRHNR------YYCQSKNGVRLCLACDLDTMFSAIFCGDRMP 265
           L +      YF     +S R  +      Y+ +S+    + L  +      +++ G +  
Sbjct: 177 LSNIEQFSCYFKELPAVSLRSGKTAGRRMYHTRSQGESSVSLVEEFRKTLCSLWQGSQTA 236

Query: 266 YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ----HKPRSQ------ 315
           +SP    Y+ W+   +   Y+QQDAHEF   +LD +H +++  +    H    Q      
Sbjct: 237 FSPDSLFYTIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQNSRNGASHTASPQDGVRLT 296

Query: 316 -GNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
             +G CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q    ++ 
Sbjct: 297 AADGKCCINGTASVVTSIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRQKRSK 355

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
             +   +C                TL  CL  FT  E L   + +FC +C+ RQ+S K+ 
Sbjct: 356 DQEPGPTC----------------TLSDCLRSFTDLEELDDTELYFCHKCKKRQKSTKKF 399

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFP 487
            ++KLP V C H+KRF  ++   +  K+D Y++FPL  LDM  YL               
Sbjct: 400 WVQKLPKVLCLHLKRFHWTAF--LRNKIDTYVEFPLKGLDMRGYLL-------------- 443

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
              +  N+L E S  ++L AV + +  L  G +       ++WY  +D+ +T  +E+ VR
Sbjct: 444 ---EPENSLPE-SCVYDLVAVASPSMDLAYGSH------EDRWYHFNDSTVTLTSEDAVR 493

Query: 548 AAQGYMMFYVQK 559
            A+ Y++FYV++
Sbjct: 494 KAKAYILFYVER 505


>gi|374109329|gb|AEY98235.1| FAFR551Wp [Ashbya gossypii FDAG1]
          Length = 469

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 231/562 (41%), Gaps = 125/562 (22%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+     +        +++C+ ++        +       RC  C   +C   + C+ 
Sbjct: 4   CPHMEQV-IQTAKVGDAVVKECITVRYLIRNCDAKSRYLRAMRCSECFQINCGSSFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C  V C    H  H   H+ K      H   V+     LFC  CRD + D +F       
Sbjct: 63  CGFVGCWNESHFLH---HSKKVG----HIFGVNATNGLLFCFRCRDYISDNEF------- 108

Query: 143 HTTSIIQSSKPENLRKRRRIDYRP--WSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRG 200
                              +D  P  W+  LR  S+   +                GL G
Sbjct: 109 -----------------VHMDIMPKHWNEVLRRSSVPAPHRG-------------EGLLG 138

Query: 201 LNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF- 259
           L N+G+TCFM+SV+Q   H P +  Y L +R +   C  ++ +  C++C +D + + ++ 
Sbjct: 139 LVNMGSTCFMSSVIQTFLHLPHVLQYML-ERLHYATCDVQDSLS-CISCAVDEIVANLYG 196

Query: 260 -------CGDRMPYSPAK---------------FLYSWWRHASNLASYEQQDAHEFFISM 297
                   G   P +  +                L   W+   NLA Y QQDAHEF+  +
Sbjct: 197 QVKEEAASGVAGPGASTQALSQSLSKQQQGFINLLTCSWKINRNLAGYSQQDAHEFWQFL 256

Query: 298 LDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC-GFTSTTFDPCVDFSLD 356
           L+ +H    +  H P S+ +   CI H +F G L S ++C  C G   TT DP +D SL 
Sbjct: 257 LNQLHTDYIRI-HGPPSKKSACGCILHMLFQGYLESSIVCSECHGNNKTTVDPIMDLSLG 315

Query: 357 LEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQ 416
           ++                                 STL  CLD F R E L +D  + C+
Sbjct: 316 IQNK-------------------------------STLHECLDSFHRRESL-TDFNYCCK 343

Query: 417 QCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI 476
            C      ++Q+S+ KLP V    +KRFEH  +   S K++ Y+ FPL L+M  Y     
Sbjct: 344 NCMSTSNPIRQLSMAKLPPVLMLQLKRFEH-LINGTSVKINDYISFPLHLNMKDYCK--- 399

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDD 535
                     P D         P+  F+L A+++H G +D GHY T  R++ + W K +D
Sbjct: 400 ----------PMDDQHP----VPNMTFKLSAIISHQGTVDKGHYTTICRINGDVWAKFND 445

Query: 536 AWITEVNENTVRAAQGYMMFYV 557
           + +T ++E  +   Q Y+++YV
Sbjct: 446 SMVTLISEEDMLKEQAYLLYYV 467


>gi|294979873|pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
 gi|294979877|pdb|3MHS|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND
           Ubiquitin Aldehyde
 gi|400261283|pdb|4FJC|A Chain A, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
           DUB Module
 gi|400261287|pdb|4FJC|E Chain E, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
           DUB Module
          Length = 476

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 233/554 (42%), Gaps = 110/554 (19%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 9   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSVPKEKFLNTMKCGTCHEINSGATFMCLQ 67

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++ +   LFC  C D + + D     +LA
Sbjct: 68  CGFCGCW---NHSHFLSHSKQIG----HIFGINSNNGLLFCFKCEDYIGNIDLINDAILA 120

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 121 --------------KYWDDVCTKTMVPSMERRD---------------------GLSGLI 145

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           N+G+TCFM+S+LQ L H P    + +S  H+   C+ ++  + C +C LD +   ++   
Sbjct: 146 NMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNN-CKVRSPDK-CFSCALDKIVHELYGAL 203

Query: 263 RMPYSPAK---------FLYSW---WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
               + +          F+Y     W+   NLA Y QQDAHEF+  +++ IH+    D  
Sbjct: 204 NTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLP 263

Query: 311 KPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSM 365
             +      N  C CI H VF G L S ++C  C   S TT DP +D SLD++  +    
Sbjct: 264 NAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKK---- 319

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                       L  CLD F + E+L  D  + C +C   Q+++
Sbjct: 320 ---------------------------KLYECLDSFHKKEQL-KDFNYHCGECNSTQDAI 351

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ+ I KLP V    +KRFEH  +   +RK+D +++FP  L+M  Y S+           
Sbjct: 352 KQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTK---------- 400

Query: 486 FPFDGDE-SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNE 543
              + D+ S     P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ ++ +++
Sbjct: 401 ---EKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSMVSSISQ 457

Query: 544 NTVRAAQGYMMFYV 557
             V   Q Y++FY 
Sbjct: 458 EEVLKEQAYLLFYT 471


>gi|6323879|ref|NP_013950.1| Ubp8p [Saccharomyces cerevisiae S288c]
 gi|1717872|sp|P50102.1|UBP8_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
           Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
           thioesterase 8; AltName:
           Full=Ubiquitin-specific-processing protease 8
 gi|295789530|pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
 gi|887604|emb|CAA90194.1| unknown [Saccharomyces cerevisiae]
 gi|151945927|gb|EDN64159.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae
           YJM789]
 gi|285814227|tpg|DAA10122.1| TPA: Ubp8p [Saccharomyces cerevisiae S288c]
 gi|392297392|gb|EIW08492.1| Ubp8p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 471

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 233/554 (42%), Gaps = 110/554 (19%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 4   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSVPKEKFLNTMKCGTCHEINSGATFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++ +   LFC  C D + + D     +LA
Sbjct: 63  CGFCGCW---NHSHFLSHSKQIG----HIFGINSNNGLLFCFKCEDYIGNIDLINDAILA 115

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 116 --------------KYWDDVCTKTMVPSMERRD---------------------GLSGLI 140

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           N+G+TCFM+S+LQ L H P    + +S  H+   C+ ++  + C +C LD +   ++   
Sbjct: 141 NMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNN-CKVRSPDK-CFSCALDKIVHELYGAL 198

Query: 263 RMPYSPAK---------FLYSW---WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
               + +          F+Y     W+   NLA Y QQDAHEF+  +++ IH+    D  
Sbjct: 199 NTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLP 258

Query: 311 KPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSM 365
             +      N  C CI H VF G L S ++C  C   S TT DP +D SLD++  +    
Sbjct: 259 NAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKK---- 314

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                       L  CLD F + E+L  D  + C +C   Q+++
Sbjct: 315 ---------------------------KLYECLDSFHKKEQL-KDFNYHCGECNSTQDAI 346

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ+ I KLP V    +KRFEH  +   +RK+D +++FP  L+M  Y S+           
Sbjct: 347 KQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTK---------- 395

Query: 486 FPFDGDE-SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNE 543
              + D+ S     P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ ++ +++
Sbjct: 396 ---EKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSMVSSISQ 452

Query: 544 NTVRAAQGYMMFYV 557
             V   Q Y++FY 
Sbjct: 453 EEVLKEQAYLLFYT 466


>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
           aries]
          Length = 520

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 247/555 (44%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I  T
Sbjct: 12  IAPDSAKFPNGSPSPWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSERQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTTAVCAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           + + ++  +C                +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 SKNQENGPTC----------------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------L 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
            P +    N L      ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+
Sbjct: 443 EPENSGPENCL------YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDED 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|349580513|dbj|GAA25673.1| K7_Ubp8p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 471

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 233/554 (42%), Gaps = 110/554 (19%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 4   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSVPKEKFLNTMKCGTCHEINSGATFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++ +   LFC  C D + + D     +LA
Sbjct: 63  CGFCGCW---NHSHFLSHSKQIG----HIFGINSNNGLLFCFKCEDYIGNIDLINDAILA 115

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 116 --------------KYWDDVCTKTMVPSMERRD---------------------GLSGLI 140

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           N+G+TCFM+S+LQ L H P    + +S  H+   C+ ++  + C +C LD +   ++   
Sbjct: 141 NMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNN-CKVRSPDK-CFSCALDKIVHELYGAL 198

Query: 263 RMPYSPAK---------FLYSW---WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
               + +          F+Y     W+   NLA Y QQDAHEF+  +++ IH+    D  
Sbjct: 199 NTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLP 258

Query: 311 KPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSM 365
             +      N  C CI H VF G L S ++C  C   S TT DP +D SLD++  +    
Sbjct: 259 NAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKK---- 314

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                       L  CLD F + E+L  D  + C +C   Q+++
Sbjct: 315 ---------------------------KLYECLDSFHKKEQL-KDFNYHCGECNSTQDAI 346

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ+ I KLP V    +KRFEH  +   +RK+D +++FP  L+M  Y S+           
Sbjct: 347 KQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTK---------- 395

Query: 486 FPFDGDE-SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNE 543
              + D+ S     P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ ++ +++
Sbjct: 396 ---EKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSIVSSISQ 452

Query: 544 NTVRAAQGYMMFYV 557
             V   Q Y++FY 
Sbjct: 453 EEVLKEQAYLLFYT 466


>gi|354548209|emb|CCE44945.1| hypothetical protein CPAR2_407470 [Candida parapsilosis]
          Length = 543

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 221/512 (43%), Gaps = 109/512 (21%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           RC  C  S   ++  C+ C  V C       H  +H   T     H  A+D + + L+C 
Sbjct: 118 RCTDCEVSDFCQVMICLQCPHVGCQ-----EHSQLHYKGT----LHMFAIDSNLSLLYCF 168

Query: 125 ACRDQVYDRDFDAA-VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
            C + +   + +   + + H   I+   +  N                            
Sbjct: 169 KCNEYINHPELEKLRLEVMHIADIVTDDEEGN---------------------------- 200

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC-----Q 238
           I + +S N    +GL+G  NLG TCFM+S LQ   H P +++ F ++  + + C     Q
Sbjct: 201 IANYTSPNKLAAKGLKGFVNLGATCFMSSTLQTFVHNPIIKSQFFNNDLHYFNCNYLHDQ 260

Query: 239 SKNG----VRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEF 293
           + NG       C+ C +D +F  +F             L + W    +LA +++QDAHEF
Sbjct: 261 NVNGNIGEQNACITCSIDLIFKEVFSSKTNEGLGITNLLTTAWYKQKSLAGFQEQDAHEF 320

Query: 294 FISMLDGIHEKVEKDQHKPRSQGNGDC-------CIAHRVFSGILRSDVMCMACGFTSTT 346
           +  +L+  H+    D H+ R+Q  GD        CI H  FS  L+S V C +C   + T
Sbjct: 321 WQFVLNEFHQ----DHHRIRTQL-GDVPKEETCTCITHSTFSFELQSCVKCKSCEAVTET 375

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            DP +D SL++               NH        +   QN     L  CLD FT+ E+
Sbjct: 376 VDPMIDLSLEI---------------NH--------LKKQQNVD---LYDCLDLFTQEEK 409

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSL 466
           L  D    C+QC  +  + K + ++ +P V    +KRF H+ +   S KV+  ++ PL L
Sbjct: 410 L--DAMISCKQCSTQSRATKTLKLKSIPPVLSIQLKRFNHNIMNDTSSKVETPVKVPLYL 467

Query: 467 DMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL 526
           ++APY                 D + +  L      +ELF+V+ H G ++ GHYV Y + 
Sbjct: 468 NIAPYC---------------VDPNSTKDL-----VYELFSVICHIGSVNTGHYVVYTKT 507

Query: 527 -SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
             N+W K DD+ ++   +  V  +  Y+++Y+
Sbjct: 508 PQNQWLKFDDSVVSIAEQKDVVNSNAYLLYYI 539


>gi|443920078|gb|ELU40071.1| UCH domain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 411

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 158/305 (51%), Gaps = 31/305 (10%)

Query: 57  RRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPH-SSHVAIHATKTSSACSHEIAVD 115
           +R      RC  C   + PR + CM C+   C +P H + H+ +          H   +D
Sbjct: 115 KRPKVAAVRCSEC-RMALPRPFVCMDCSVAGCFMPGHITDHLRL--------AGHGFFMD 165

Query: 116 VDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERS 175
           +    +FC  C D +Y    D A  LA  ++  Q ++ + +    R  YRPW PD +   
Sbjct: 166 LVSGSVFCSDCDDFIYSSRLDQAHSLALLSAEEQVARFK-ISSSPRQQYRPWVPDGQ--- 221

Query: 176 LMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
            + N+ +    +  S      GLRGL N+GNTC++N ++Q + H P +RNYF+SDRHN  
Sbjct: 222 -IANDLARATQVQCS------GLRGLINMGNTCYLNVIVQTMVHNPLVRNYFMSDRHNHQ 274

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
            C +K+    C++C++D +F+ ++  D  PY P   L+  W  +S LA+Y Q DAHEFFI
Sbjct: 275 LCDTKD----CMSCEMDRLFTKVYSSDPGPYVPTSMLHCLWVKSSELATYAQHDAHEFFI 330

Query: 296 SMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
           SML+ IH         P S      C+ H  F+G+L+SDV C  C   ++  +  +D SL
Sbjct: 331 SMLNQIHATT------PGSSQTNCTCLVHSTFAGLLQSDVQCGHCENVTSRSEIMLDISL 384

Query: 356 DLEPN 360
           +L+P 
Sbjct: 385 ELKPT 389


>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
          Length = 522

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 244/542 (45%), Gaps = 101/542 (18%)

Query: 66  CGVCGDSSCPRLYACMACAAVSC------HVPPH--SSHVAIHATKTSSAC-----SHEI 112
           C VC  +  P  + C+ C++V C      H   H   +   ++  K           H +
Sbjct: 29  CSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQAPLNCHKRQEKTDKDRMQHTV 86

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSP 169
            +D      +C  C D V +      V  V  H  ++  S+   E  RKR+ ++    S 
Sbjct: 87  CMDCSSYSTYCYRCDDFVVNDTKLCLVQKVREHLQNLENSAFTAERHRKRKFLE----SA 142

Query: 170 DLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHT 220
            L ++ L VN ++     +           GL NLGNTCFMN++LQ+L         F  
Sbjct: 143 SLSKKLLKVNGSTTALCAT-----------GLRNLGNTCFMNAILQSLSNIQQFCCYFKE 191

Query: 221 PP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWR 277
            P   LRN   + R   Y+ +S+  V + L  +      A++ G++  +SP    Y  W+
Sbjct: 192 LPAVELRNGKTAGRRT-YHTRSQGDVNVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWK 250

Query: 278 HASNLASYEQQDAHEFFISMLDGIHEKVEKD----QHKPRSQGN------GDCCI----- 322
              N   Y+QQDAHEF   +LD +H +++ +     H   SQ N        CCI     
Sbjct: 251 IMPNFRGYQQQDAHEFMRYLLDHLHLELQGEFDGSSHSVLSQANCSRSACNKCCINGAST 310

Query: 323 -AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEAD 381
               VF G+L+++V C+ CG  S  FDP +D SLD+ P+Q  + +  + ++  +C     
Sbjct: 311 VVTSVFGGVLQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRCKNQENGPTC----- 364

Query: 382 GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHI 441
                      TL  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+
Sbjct: 365 -----------TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHL 413

Query: 442 KRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPS 500
           KRF  ++   +  KVD Y+ FPL  LDM  +L                   E   +   S
Sbjct: 414 KRFHWTAY--LRNKVDTYVDFPLRGLDMKSFLL------------------EPENIGPES 453

Query: 501 SEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             ++L AVV H G  + +GHY  Y     +W+  +D+ +T   E TV  A+ Y++FYV++
Sbjct: 454 CLYDLAAVVVHHGSGVGSGHYTAYATHKGRWFHFNDSTVTLTEEETVAKAKAYILFYVER 513

Query: 560 ML 561
            +
Sbjct: 514 QV 515


>gi|190408449|gb|EDV11714.1| ubiquitin carboxyl-terminal hydrolase 8 [Saccharomyces cerevisiae
           RM11-1a]
 gi|256271624|gb|EEU06666.1| Ubp8p [Saccharomyces cerevisiae JAY291]
 gi|259148808|emb|CAY82053.1| Ubp8p [Saccharomyces cerevisiae EC1118]
 gi|323303444|gb|EGA57239.1| Ubp8p [Saccharomyces cerevisiae FostersB]
 gi|323332143|gb|EGA73554.1| Ubp8p [Saccharomyces cerevisiae AWRI796]
 gi|323336055|gb|EGA77329.1| Ubp8p [Saccharomyces cerevisiae Vin13]
 gi|323347039|gb|EGA81315.1| Ubp8p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323353165|gb|EGA85465.1| Ubp8p [Saccharomyces cerevisiae VL3]
          Length = 471

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 233/554 (42%), Gaps = 110/554 (19%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 4   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSVPKEKFLNTMKCGTCHEINSGATFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++ +   LFC  C D + + D     +LA
Sbjct: 63  CGFCGCW---NHSHFLSHSKQIG----HIFGINSNNGLLFCFKCEDYIGNIDLINDAILA 115

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 116 --------------KYWDDVCTKTMVPSMERRD---------------------GLSGLI 140

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           N+G+TCFM+S+LQ L H P    + +S  H+   C+ ++  + C +C LD +   ++   
Sbjct: 141 NMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNN-CKVRSPDK-CFSCALDKIVHELYGAL 198

Query: 263 RMPYSPAK---------FLYSW---WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
               + +          F+Y     W+   NLA Y QQDAHEF+  +++ IH+    D  
Sbjct: 199 NTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLP 258

Query: 311 KPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSM 365
             +      N  C CI H VF G L S ++C  C   S TT DP +D SLD++  +    
Sbjct: 259 NAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKK---- 314

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                       L  CLD F + E+L  D  + C +C   Q+++
Sbjct: 315 ---------------------------KLYECLDSFHKKEQL-KDFNYHCGECNSTQDAI 346

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ+ I KLP V    +KRFEH  +   +RK+D +++FP  L+M  Y S+           
Sbjct: 347 KQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTK---------- 395

Query: 486 FPFDGDE-SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNE 543
              + D+ S     P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ ++ +++
Sbjct: 396 ---EKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSMVSSISQ 452

Query: 544 NTVRAAQGYMMFYV 557
             V   Q Y++FY 
Sbjct: 453 AEVLKEQAYLLFYT 466


>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
           melanoleuca]
 gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
          Length = 520

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 246/555 (44%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKPQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTAAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           + +                 +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 SKN----------------QENGPVCSLRDCLRSFTDLEELDETELYMCHRCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------L 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
            P +    + L      ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+
Sbjct: 443 EPENSGPEHCL------YDLAAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDED 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
           [Otolemur garnettii]
          Length = 520

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 246/555 (44%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFIAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLVE----NSSLNSKLLKVNGSTAAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----QHKPRSQGN- 317
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++       H    Q N 
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQDGFNGVSHSAILQENS 293

Query: 318 -----GDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
                  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 294 TLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           + +                 +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 SKN----------------QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------L 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
            P +    N L      ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 EPENSGPENCL------YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEE 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|406861151|gb|EKD14206.1| ubiquitin carboxyl-terminal hydrolase [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 517

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 222/476 (46%), Gaps = 90/476 (18%)

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSP 169
           H + V+     LFC  C D V+D                     E+LR R+   +   S 
Sbjct: 107 HRLYVESRNGYLFCQMCDDFVFDPTL------------------EDLRLRK---FGTGSF 145

Query: 170 DLRERSL--MVNNASPIDS--MSSSNGDLP---RGLRGLNNLGNTCFMNSVLQALFHTPP 222
             R+R L  +  NAS  D+  MS +  + P    G+RG+ N+G TC+MN +LQ+L   P 
Sbjct: 146 SSRKRKLDDLFTNASKEDAQLMSLNTNNTPCRANGIRGIYNMGATCYMNVILQSLIQNPL 205

Query: 223 LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCG-DRMPYSPAKFLYSWW----R 277
           LRN+ L D H    C  KN    C+AC +D MF A     D + YS    L  +W    +
Sbjct: 206 LRNFHLGDGHRNAECSRKN----CVACAMDEMFQAFHAQPDTVGYSAHNMLACFWMSKRK 261

Query: 278 HASNLASYEQQDAHEFFISMLDGIHE--------KVEKDQHKP-RSQGNGDC-CIAHRVF 327
               LAS ++QDAHEFF  + + +HE         +E     P R++ +  C CI H+ F
Sbjct: 262 AYEELASNKEQDAHEFFQFLTEELHEINASAKLQSIEDGAPSPKRTKPDSSCNCIVHQTF 321

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEP-NQGSSMKTSSTKSNHSCNCEADGMNSS 386
            G  +S + C  CG   T+    +D SL L+  ++  S+K +                  
Sbjct: 322 YGRTQSTITCQGCGEVRTSVQQFMDLSLGLDVLSKKKSIKVT------------------ 363

Query: 387 QNCGISTLMGCLD-RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
              G+S +  CL+  +T  ER     ++ C  C    E+ K  SI+ LP V    +KRF+
Sbjct: 364 ---GLS-VKRCLEAEYTVAERC----EYTCHVCGT-NEAKKLSSIKSLPNVLALQLKRFK 414

Query: 446 HSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
             +    + K++  + FPL LDM PY +    R+R           + N        +EL
Sbjct: 415 QYNGN--ASKIETKVSFPLKLDMFPYTN----RAR--------QDIKQNPELARGCTYEL 460

Query: 506 FAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            +VV H G L+ GHY++Y R+ N+W+K +D  +T  +++ V  A+ +++FYV + L
Sbjct: 461 QSVVVHVGNLETGHYISYSRVGNQWFKFNDHNVTMASKSDVLNAEAFILFYVIQSL 516


>gi|212534318|ref|XP_002147315.1| ubiquitin hydrolase Ubp8, putative [Talaromyces marneffei ATCC
           18224]
 gi|210069714|gb|EEA23804.1| ubiquitin hydrolase Ubp8, putative [Talaromyces marneffei ATCC
           18224]
          Length = 507

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 225/496 (45%), Gaps = 77/496 (15%)

Query: 77  LYACMACAAVSCHVPPHSS-HVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDF 135
           +Y C+ C+        HS+    +H+ KT     H+  +D     LFC +CRD VYD + 
Sbjct: 78  MYICVDCS------EKHSNGDRQVHSEKTD----HQFYIDSRTGALFCQSCRDFVYDHEL 127

Query: 136 DAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLP 195
           +     A   S   +   E++          ++  +    +   + + I + ++      
Sbjct: 128 EKIRTRAADES---NGNVEHI----------FTNGVTTTEVPEADETYIKTNATKRTCQS 174

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            G+RGL NLG TC+MN VLQ L H P +  YFL + H  Y CQ    V  C+ C +   F
Sbjct: 175 EGVRGLFNLGQTCYMNVVLQTLLHDPFMNAYFLGNGHKYYDCQ----VDGCVLCAMSRAF 230

Query: 256 SAI-FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKP 312
           +    C  +  ++    LYS W++   LA   QQDAHEF+  +  G+H     E DQ K 
Sbjct: 231 AEFNGCDKKDGFTAETLLYSTWKNHPPLAGNHQQDAHEFYQFLAGGLHAASSDENDQLKC 290

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
                   C   +   G  +S + C  C  TS T  P ++ SLD++              
Sbjct: 291 N-------CFFCKALFGKFQSTLTCPICRHTSPTEQPLLELSLDVQL------------- 330

Query: 373 NHSCNCEADGMNSSQNCGIS-TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL-KQMSI 430
            HS   +   MN   +  ++ TL GCL  +  PE L   + + CQ C    + L KQ+ I
Sbjct: 331 -HS---KKRQMNGKLHGSVTPTLAGCLQSWVTPEELIM-EGYQCQGCHSYPDKLTKQLRI 385

Query: 431 RKLPLVSCFHIKRFEH--SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++LP + C  +KRFE   S  RKM  K+D    FPL ++M PY  +S      G++  P 
Sbjct: 386 KQLPAMLCMQMKRFEQTDSETRKMQGKID----FPLEINMQPYTVAS------GSKKAP- 434

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
                 T       ++L + + H G  L+ GHY+ Y++  ++W   +D  +T V+E  V 
Sbjct: 435 -----ATKRNDMFMYDLASAIVHDGAGLNEGHYIAYIQQGDRWCLFNDDKVTLVSEGDVL 489

Query: 548 AAQGYMMFYVQKMLYY 563
            A  Y++FY  + L +
Sbjct: 490 NADAYLLFYTLRSLSF 505


>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
           [Nomascus leucogenys]
          Length = 520

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 243/555 (43%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSTLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 ------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEE 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
           carolinensis]
          Length = 533

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 236/538 (43%), Gaps = 99/538 (18%)

Query: 66  CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHA-----TKTSSACSHEIAV 114
           C VC  +  P  + C+ C+ V C      H   H     +        +      H + +
Sbjct: 29  CSVCRSNKSP--WICLTCSNVHCGRYVNGHAKKHYEDAQVSVPNHKKMEKQEKVQHTVCM 86

Query: 115 DVDRAELFCCACRDQVY-DRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRE 173
           D      +C  C D V  D  F    ++     ++Q+           ++   ++ D   
Sbjct: 87  DCSSYSTYCYRCDDFVVNDTKFG---LVQKVRELLQN-----------LENSAFTADRHR 132

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGL--RGLNNLGNTCFMNSVLQAL---------FHTPP 222
           +  ++ N+S    +   NG     L   GL NLGNTCFMN++LQ+L         F   P
Sbjct: 133 KRKLLENSSLNSKLLKINGSTAAALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELP 192

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 193 AVELRNGKTAGRRT-YHTRSQGDNGVSLVEEFRKTLCALWQGSQAAFSPESLFYVVWKIM 251

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD-----------QHKPRSQGNGDCCI------ 322
            N   Y+QQDAHEF   +LD +H +++             Q        G CCI      
Sbjct: 252 PNFRGYQQQDAHEFMRYLLDHLHRELQGGFNGVSRSSVLLQENSGLSAGGRCCINGASTV 311

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
              +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ + ++  +C      
Sbjct: 312 VTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKNQENGPTC------ 364

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                     TL  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+K
Sbjct: 365 ----------TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLK 414

Query: 443 RFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           RF  ++   +  KVD Y++FPL  LDM  +L              P +    N L     
Sbjct: 415 RFHWTAY--LRNKVDTYVEFPLRGLDMKCFLLE------------PENSRPENCL----- 455

Query: 502 EFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
            ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 456 -YDLAAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETVLRAKAYILFYVE 512


>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
          Length = 490

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 234/534 (43%), Gaps = 95/534 (17%)

Query: 68  VCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI-----HATKTSSACSHEIAVDV 116
           VC  +  P  + C+ C++V C      H   H     I       T+      H + +D 
Sbjct: 1   VCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDC 58

Query: 117 DRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSL 176
                +C  C D V +   D  + L            E+L+    ++   ++ D   +  
Sbjct: 59  SSYSTYCYRCDDFVVN---DTKLGLVQKVR-------EHLQN---LENSAFTSDRHRKRK 105

Query: 177 MVNNASPIDSMSSSNGDLPRG-LRGLNNLGNTCFMNSVLQAL---------FHTPP---L 223
           ++ N+S    +   NG        GL NLGNTCFMN++LQ+L         F   P   L
Sbjct: 106 LLENSSLNSKLLKVNGSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVEL 165

Query: 224 RNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           RN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   N  
Sbjct: 166 RNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 224

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHRVF 327
            Y+QQDAHEF   +LD +H +++            Q       +  CCI         +F
Sbjct: 225 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENATLSASNKCCINGASTVVTAIF 284

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +T + ++   C           
Sbjct: 285 GGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRTKNQENGPMC----------- 332

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
                TL  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF  +
Sbjct: 333 -----TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWT 387

Query: 448 SVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           +   +  KVD Y++FPL  LDM  YL                   E       S  ++L 
Sbjct: 388 AY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYDLA 427

Query: 507 AVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 428 AVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 481


>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
           [Nomascus leucogenys]
          Length = 498

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 237/540 (43%), Gaps = 99/540 (18%)

Query: 64  PRCGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEI 112
           P   VC  +  P  + C+ C++V C      H   H     +  T     +      H +
Sbjct: 5   PHLAVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQEKAQHTV 62

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSP 169
            +D      +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    + 
Sbjct: 63  CMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NS 118

Query: 170 DLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHT 220
            L  + L VN ++     +           GL NLGNTCFMN++LQ+L         F  
Sbjct: 119 TLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKE 167

Query: 221 PP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWR 277
            P   LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+
Sbjct: 168 LPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWK 226

Query: 278 HASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI----- 322
              N   Y+QQDAHEF   +LD +H +++            Q       +  CCI     
Sbjct: 227 IMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGAST 286

Query: 323 -AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEAD 381
               +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ +            
Sbjct: 287 VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKN------------ 333

Query: 382 GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHI 441
                +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+
Sbjct: 334 ----QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHL 389

Query: 442 KRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPS 500
           KRF  ++   +  KVD Y++FPL  LDM  YL                   E       S
Sbjct: 390 KRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPES 429

Query: 501 SEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 430 CLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 489


>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
          Length = 498

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/538 (27%), Positives = 235/538 (43%), Gaps = 97/538 (18%)

Query: 64  PRCGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEI 112
           P   VC  +  P  + C+ C++V C      H   H     +  T     +      H +
Sbjct: 5   PHLAVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTV 62

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSSKPENLRKRRRIDYRPWSPD 170
            +D      +C  C D V +      V  V  H  ++  S+   +  K+R++     +  
Sbjct: 63  CMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKL---LENST 119

Query: 171 LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTP 221
           L  + L VN ++     +           GL NLGNTCFMN++LQ+L         F   
Sbjct: 120 LNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 168

Query: 222 P---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRH 278
           P   LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+ 
Sbjct: 169 PAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI 227

Query: 279 ASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------ 322
             N   Y+QQDAHEF   +LD +H +++            Q       +  CCI      
Sbjct: 228 MPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTV 287

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
              +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ +             
Sbjct: 288 VTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKN------------- 333

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
               +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+K
Sbjct: 334 ---QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLK 390

Query: 443 RFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           RF  ++   +  KVD Y++FPL  LDM  YL                   E       S 
Sbjct: 391 RFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESC 430

Query: 502 EFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
            ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 431 LYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVE 488


>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
          Length = 498

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 237/540 (43%), Gaps = 99/540 (18%)

Query: 64  PRCGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEI 112
           P   VC  +  P  + C+ C++V C      H   H     +  T     +      H +
Sbjct: 5   PHLAVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTV 62

Query: 113 AVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSP 169
            +D      +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    + 
Sbjct: 63  CMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NS 118

Query: 170 DLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHT 220
            L  + L VN ++     +           GL NLGNTCFMN++LQ+L         F  
Sbjct: 119 TLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKE 167

Query: 221 PP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWR 277
            P   LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+
Sbjct: 168 LPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWK 226

Query: 278 HASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI----- 322
              N   Y+QQDAHEF   +LD +H +++            Q       +  CCI     
Sbjct: 227 IMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGAST 286

Query: 323 -AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEAD 381
               +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ +            
Sbjct: 287 VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKN------------ 333

Query: 382 GMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHI 441
                +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+
Sbjct: 334 ----QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHL 389

Query: 442 KRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPS 500
           KRF  ++   +  KVD Y++FPL  LDM  YL                   E       S
Sbjct: 390 KRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPES 429

Query: 501 SEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 430 CLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 489


>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
           abelii]
          Length = 520

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 243/555 (43%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSTLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 ------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEE 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
           mutus]
          Length = 492

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 240/536 (44%), Gaps = 99/536 (18%)

Query: 68  VCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEIAVDV 116
           VC  +  P  + C+ C++V C      H   H     I  T     +      H + +D 
Sbjct: 3   VCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNHKKSEKQEKAQHTVCMDC 60

Query: 117 DRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSPDLRE 173
                +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +  L  
Sbjct: 61  SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NSSLNS 116

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP-- 222
           + L VN ++     +           GL NLGNTCFMN++LQ+L         F   P  
Sbjct: 117 KLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAV 165

Query: 223 -LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASN 281
            LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   N
Sbjct: 166 ELRNGKTAGRRT-YHTRSQGENNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN 224

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHR 325
              Y+QQDAHEF   +LD +H +++            Q       +  CCI         
Sbjct: 225 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTA 284

Query: 326 VFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNS 385
           +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ + ++  +C         
Sbjct: 285 IFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKNQENGPTC--------- 334

Query: 386 SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
                  +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF 
Sbjct: 335 -------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH 387

Query: 446 HSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFE 504
            ++   +  KVD Y++FPL  LDM  YL              P +    N L      ++
Sbjct: 388 WTAY--LRNKVDTYVEFPLRGLDMKCYL------------LEPENSGPENCL------YD 427

Query: 505 LFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+TV  A+ Y++FYV++
Sbjct: 428 LAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTVLKAKAYILFYVER 483


>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
           boliviensis boliviensis]
          Length = 498

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 238/541 (43%), Gaps = 99/541 (18%)

Query: 63  VPRCGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHATKTSSA-----CSHE 111
           +P   VC  +  P  + C+ C++V C      H   H     +  T    +       H 
Sbjct: 4   LPHLAVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDRAQHT 61

Query: 112 IAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWS 168
           + +D      +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +
Sbjct: 62  VCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----N 117

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FH 219
             L  + L VN ++     +           GL NLGNTCFMN++LQ+L         F 
Sbjct: 118 STLNSKLLKVNGSTAAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFK 166

Query: 220 TPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWW 276
             P   LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W
Sbjct: 167 ELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVW 225

Query: 277 RHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI---- 322
           +   N   Y+QQDAHEF   +LD +H +++            Q       +  CCI    
Sbjct: 226 KIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSTILQENSALSASNKCCINGAS 285

Query: 323 --AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEA 380
                +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ +           
Sbjct: 286 TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKN----------- 333

Query: 381 DGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFH 440
                 +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H
Sbjct: 334 -----QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLH 388

Query: 441 IKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           +KRF  ++   +  KVD Y++FPL  LDM  YL                   E       
Sbjct: 389 LKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPD 428

Query: 500 SSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 429 SCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVE 488

Query: 559 K 559
           +
Sbjct: 489 R 489


>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
 gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
          Length = 520

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 240/555 (43%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI--- 99
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I   
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVLCGRYVNGHAKKHYEDAQIPLL 69

Query: 100 --HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
               ++      H + +D      +C  C D V +      V  V  H  S+  S+   +
Sbjct: 70  NHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQSLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTAAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYRQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               N  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 294 TLSANNKCCINGASTVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP   C H+KRF  ++   +  KVD Y+QFPL  LDM  YL             
Sbjct: 397 KFWIQKLPKALCLHLKRFHWTAY--LRNKVDTYVQFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AV  H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 ------EPENSGPDSCLYDLAAVFVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEE 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVGKAKAYILFYVER 511


>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
 gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
           Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
           thioesterase 3; AltName:
           Full=Ubiquitin-specific-processing protease 3
 gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
 gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
 gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
 gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
 gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
 gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
 gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
          Length = 520

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 241/553 (43%), Gaps = 104/553 (18%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSSKPEN 155
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 156 LRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQ 215
             K+R++     +  L  + L VN ++     +           GL NLGNTCFMN++LQ
Sbjct: 130 RHKKRKL---LENSTLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQ 175

Query: 216 AL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR 263
           +L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G +
Sbjct: 176 SLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQ 234

Query: 264 MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPR 313
             +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q    
Sbjct: 235 TAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENST 294

Query: 314 SQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
              +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++
Sbjct: 295 LSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS 353

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
                            + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+
Sbjct: 354 ----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKK 397

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFF 486
             I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL              
Sbjct: 398 FWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------- 442

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENT 545
                E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E T
Sbjct: 443 -----EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEET 497

Query: 546 VRAAQGYMMFYVQ 558
           V  A+ Y++FYV+
Sbjct: 498 VVKAKAYILFYVE 510


>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
           porcellus]
          Length = 520

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 155/567 (27%), Positives = 246/567 (43%), Gaps = 107/567 (18%)

Query: 43  DCLHIKPPGGRAAIRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------H 89
           +C H+        I  DS++ P        C VC  +  P  + C+ C++V C      H
Sbjct: 2   ECPHL---SASVCIAPDSAKFPHGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGH 56

Query: 90  VPPHSSHVAIHAT-----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLA 142
              H     I  T     +      H + +D      +C  C D V +      V  V  
Sbjct: 57  AKKHYEDAQIPLTNFKKSEKQDKPQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVRE 116

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
           H  ++  S+   +  ++R+      +  L  + L VN ++     +           GL 
Sbjct: 117 HLQNLENSAFTADRHRKRKFSE---NSSLNSKLLKVNGSTTAICAT-----------GLR 162

Query: 203 NLGNTCFMNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACD 250
           NLGNTCFMN++LQ+L         F   P   LRN   + R   Y+ +S+    + L  +
Sbjct: 163 NLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDSSVSLVEE 221

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD-- 308
                 A++ G +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++    
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281

Query: 309 --------QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFS 354
                   Q       +  CCI         VF G+L+++V C+ CG  S  FDP +D S
Sbjct: 282 GVSGTAILQENSSLAASNKCCINGASTVVTAVFGGVLQNEVNCLICGTESRKFDPFLDLS 341

Query: 355 LDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFF 414
           LD+ P+Q  S ++                 + +N  + +L  CL  FT  E L   + + 
Sbjct: 342 LDI-PSQFRSKRS----------------KNQENGPVCSLRDCLRSFTDLEELDETELYM 384

Query: 415 CQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLS 473
           C +C+ +Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL 
Sbjct: 385 CHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL 442

Query: 474 SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYK 532
                             E       S  ++L AVV H G  + +GHY  Y     +W+ 
Sbjct: 443 ------------------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVHEGRWFH 484

Query: 533 CDDAWITEVNENTVRAAQGYMMFYVQK 559
            +D+ +T  +E+TV  A+ Y++FYV++
Sbjct: 485 FNDSTVTLTDEDTVGKAKAYILFYVER 511


>gi|323307659|gb|EGA60924.1| Ubp8p [Saccharomyces cerevisiae FostersO]
          Length = 471

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 232/554 (41%), Gaps = 110/554 (19%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 4   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSVPKEKFLNTMKCGTCHEINSGATFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++ +   LFC  C D + + D     +LA
Sbjct: 63  CGFCGCW---NHSHFLSHSKQIG----HIFGINSNNGLLFCFKCEDYIGNIDLINDAILA 115

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 116 --------------KYWDDVCTKTMVPSMERRD---------------------GLSGLI 140

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
            +G+TCFM+S+LQ L H P    + +S  H+   C+ ++  + C +C LD +   ++   
Sbjct: 141 XMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNN-CKVRSPDK-CFSCALDKIVHELYGAL 198

Query: 263 RMPYSPAK---------FLYSW---WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
               + +          F+Y     W+   NLA Y QQDAHEF+  +++ IH+    D  
Sbjct: 199 NTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLP 258

Query: 311 KPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSM 365
             +      N  C CI H VF G L S ++C  C   S TT DP +D SLD++  +    
Sbjct: 259 NAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKK---- 314

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                       L  CLD F + E+L  D  + C +C   Q+++
Sbjct: 315 ---------------------------KLYECLDSFHKKEQL-KDFNYHCGECNSTQDAI 346

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           KQ+ I KLP V    +KRFEH  +   +RK+D +++FP  L+M  Y S+           
Sbjct: 347 KQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTK---------- 395

Query: 486 FPFDGDE-SNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNE 543
              + D+ S     P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ ++ +++
Sbjct: 396 ---EKDKHSENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSMVSSISQ 452

Query: 544 NTVRAAQGYMMFYV 557
             V   Q Y++FY 
Sbjct: 453 AEVLKEQAYLLFYT 466


>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
 gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
           Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
           thioesterase 3; AltName:
           Full=Ubiquitin-specific-processing protease 3
 gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
 gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
 gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
          Length = 520

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 242/555 (43%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI--- 99
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I   
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLL 69

Query: 100 --HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
               ++      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP   C H+KRF  ++   +  KVD Y+QFPL  LDM  YL             
Sbjct: 397 KFWIQKLPKALCLHLKRFHWTAY--LRNKVDTYVQFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 ------EPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEE 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVGKAKAYILFYVER 511


>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
           domestica]
          Length = 520

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 243/555 (43%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI--- 99
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I   
Sbjct: 12  IVPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQISLT 69

Query: 100 --HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
               T+      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKTEKQEKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTTALCAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIQQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +
Sbjct: 294 SLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPLCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 ------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEE 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
           [Callithrix jacchus]
          Length = 520

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 243/555 (43%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSTLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 294 TLFASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 ------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTVTDEE 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
 gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
 gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
          Length = 520

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 237/538 (44%), Gaps = 99/538 (18%)

Query: 66  CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEIAV 114
           C VC  +  P  + C+ C++V C      H   H     +  T     +      H + +
Sbjct: 29  CSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCM 86

Query: 115 DVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSPDL 171
           D      +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +  L
Sbjct: 87  DCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NSTL 142

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
             + L VN ++     +           GL NLGNTCFMN++LQ+L         F   P
Sbjct: 143 NSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 191

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 192 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 250

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 251 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 310

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++                
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS---------------- 353

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
            + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 354 KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 413

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL                   E       S  
Sbjct: 414 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCL 453

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 454 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 511


>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
           africana]
          Length = 520

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 249/568 (43%), Gaps = 109/568 (19%)

Query: 43  DCLHIKPPGGRAAIRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------H 89
           +C H+   G    I  DS++ P        C VC  +  P  + C+ C++V C      H
Sbjct: 2   ECPHL---GSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGH 56

Query: 90  VPPHSSHVAIHAT-----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLA 142
              H     +  T     +      H + +D      +C  C D V +      V  V  
Sbjct: 57  AKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVRE 116

Query: 143 HTTSIIQSS-KPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGL 201
           H  ++  S+   +  RKR+ ++    +  L  + L VN ++     +           GL
Sbjct: 117 HLQNLENSAFTADRHRKRKLLE----NSSLNSKLLKVNGSTTAICAT-----------GL 161

Query: 202 NNLGNTCFMNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLAC 249
            NLGNTCFMN++LQ+L         F   P   LRN   + R   Y+ +S+    + L  
Sbjct: 162 RNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVE 220

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD- 308
           +      A++ G    +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++   
Sbjct: 221 EFRKTLCALWQGSPTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGF 280

Query: 309 ---------QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
                    Q       +  CCI         +F G+L+++V C+ CG  S  FDP +D 
Sbjct: 281 NGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGVLQNEVNCLICGTESRKFDPFLDL 340

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SLD+ P+Q  + ++ +                 +N  + +L  CL  FT  E L   + +
Sbjct: 341 SLDI-PSQFRNKRSKN----------------QENGPVCSLRDCLRSFTDLEELDETELY 383

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYL 472
            C +C+ +Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL
Sbjct: 384 MCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL 441

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWY 531
                         P +    N L      ++L AVV H G  + +GHY  +     +W+
Sbjct: 442 ------------LEPENSGPENCL------YDLAAVVVHHGSGVGSGHYTAFATHEGRWF 483

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQK 559
             +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 484 HFNDSTVTLTDEETVLKAKAYILFYVER 511


>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
 gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
          Length = 467

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 225/485 (46%), Gaps = 86/485 (17%)

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRP 166
           H + +D      +C  C D V +      V  V  H  ++  S+   E  RKR+ ++   
Sbjct: 29  HTVCMDCSSYSTYCYRCDDFVVNDTKLCLVQKVREHLQNLENSAFTAERHRKRKFLE--- 85

Query: 167 WSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL--------- 217
            S  L ++ L VN ++     +           GL NLGNTCFMN++LQ+L         
Sbjct: 86  -SASLSKKLLKVNGSTTALCAT-----------GLRNLGNTCFMNAILQSLSNIQQFCCY 133

Query: 218 FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYS 274
           F   P   LRN   + R   Y+ +S+  V + L  +      A++ G++  +SP    Y 
Sbjct: 134 FKELPAVELRNGKTAGRRT-YHTRSQGDVNVSLVEEFRKTLCALWQGNQTAFSPESLFYV 192

Query: 275 WWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----QHKPRSQGN------GDCCI-- 322
            W+   N   Y+QQDAHEF   +LD +H +++ +     H   SQ N        CCI  
Sbjct: 193 VWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGEFDGSSHSVLSQANCSRSASNKCCING 252

Query: 323 ----AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
                  VF G+L+++V C+ CG  S  FDP +D SLD+ P+Q  + +  + ++  +C  
Sbjct: 253 ASTVVTSVFGGVLQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRCKNQENGPTC-- 309

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         TL  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C
Sbjct: 310 --------------TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLC 355

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            H+KRF  ++   +  KVD Y+ FPL  LDM  +L                   E   + 
Sbjct: 356 LHLKRFHWTAY--LRNKVDTYVDFPLRGLDMKSFLL------------------EPENIG 395

Query: 498 EPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T   E TV  A+ Y++FY
Sbjct: 396 PESCLYDLAAVVVHHGSGVGSGHYTAYATHKGRWFHFNDSTVTLTEEETVAKAKAYILFY 455

Query: 557 VQKML 561
           V++ +
Sbjct: 456 VERQV 460


>gi|326493410|dbj|BAJ85166.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 226

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/266 (42%), Positives = 136/266 (51%), Gaps = 73/266 (27%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSS--CPRL 77
           P PC HLA    R  ++P R ++ CL ++P  GR  IRRD+ EVPRC  C  SS   PRL
Sbjct: 7   PPPCAHLAAH--RLTSRPLRFLRRCLRVRP-LGRPEIRRDAREVPRCSPCPASSQPPPRL 63

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           YAC+ CA V C         A     ++ A  H+IAVD                      
Sbjct: 64  YACLTCATVFC------PSHAASHAASAPAPGHQIAVD---------------------- 95

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                                     YR W+PD  E +L V +A P  S S++    P G
Sbjct: 96  --------------------------YRAWAPDPAEVAL-VRSADPTTSASAAE---PAG 125

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR----------LCL 247
           LRGLNNLGNTCFMNSVLQAL H PPLRNYFL DRHNR+ C  +  +R           CL
Sbjct: 126 LRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPMRHRTTDAEAKAACL 185

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLY 273
           ACDLD ++SA F G+R PYSPAKFLY
Sbjct: 186 ACDLDEIYSATFSGERTPYSPAKFLY 211


>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
 gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
 gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
 gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
          Length = 520

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 242/554 (43%), Gaps = 106/554 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSTLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 443 ------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEE 496

Query: 545 TVRAAQGYMMFYVQ 558
           TV  A+ Y++FYV+
Sbjct: 497 TVVKAKAYILFYVE 510


>gi|189091888|ref|XP_001929777.1| hypothetical protein [Podospora anserina S mat+]
 gi|27803054|emb|CAD60757.1| unnamed protein product [Podospora anserina]
 gi|188219297|emb|CAP49277.1| unnamed protein product [Podospora anserina S mat+]
          Length = 560

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 201/430 (46%), Gaps = 60/430 (13%)

Query: 109 SHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           SH   VD   A L+C  C D VYD  F+   +    TS        N RKR++ +   +S
Sbjct: 106 SHRFYVDSRSAALYCQMCDDMVYDPTFEELRLKKLGTSTF-----SNTRKRKQDEL--FS 158

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           PD  + S    + +   +   +NG     LRG+ N G TC+ N VLQ+  H P LRNY+L
Sbjct: 159 PDPVKDSPAYISQNTTTATCKANG-----LRGIYNAGATCYQNVVLQSFLHNPILRNYYL 213

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLA 283
           SD H+   C + +    CL+C +D MF   +  +    Y+ A  L  +W    +   NL 
Sbjct: 214 SDGHSG--CDTPH----CLSCAMDDMFQDFYAVENTNGYTAANILSGFWISERKAFENLV 267

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGF 342
           + ++QDAHEFF  + + +HE+   D  KP       C CI H+ F G L++   C  C  
Sbjct: 268 TTKEQDAHEFFQFLAEELHER-NGDGKKPEIGSEHSCNCIIHQTFYGKLQTQTTCQNCQG 326

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            +      +D SL LE                +                 TL  CLD   
Sbjct: 327 VTNQVQSFLDLSLPLENLTQKKGGKKLLGGKGT----------------MTLQECLDE-- 368

Query: 403 RPERLGSDQ-KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KMSRKVDRYL 460
             E +  D+ ++ C  C   Q++ +Q SI++LP V    +KRFE+   R + + K+D  +
Sbjct: 369 --EYVKLDKCEYRCNGCNSTQQARRQTSIKRLPNVLSIQLKRFEYKQGRHERAAKIDTPV 426

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS-EFELFAVVTHTGKLDAGH 519
           QFPL L+M PY  +++ RS          GD  ++        ++L +VV H G++D GH
Sbjct: 427 QFPLQLNMLPY--TTVGRS----------GDTKDSYELARQCTYDLLSVVVHVGEIDTGH 474

Query: 520 YVTYLRLSNK 529
           YV+Y R+ ++
Sbjct: 475 YVSYCRVGDQ 484


>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
          Length = 503

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 237/535 (44%), Gaps = 97/535 (18%)

Query: 68  VCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI-----HATKTSSACSHEIAVDV 116
           VC  +  P  + C+ C++V C      H   H     +       ++      H + +D 
Sbjct: 14  VCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLANHKKSEKQDKPQHTVCMDC 71

Query: 117 DRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRER 174
                +C  C D V +      V  V  H  ++  S+   +  ++R++        L   
Sbjct: 72  SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKL--------LENS 123

Query: 175 SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP--- 222
           SL   N   +    S+ G    GLR   NLGNTCFMN++LQ+L         F   P   
Sbjct: 124 SL---NTKLLKVNGSTTGICATGLR---NLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 177

Query: 223 LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNL 282
           LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   N 
Sbjct: 178 LRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNF 236

Query: 283 ASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHRV 326
             Y+QQDAHEF   +LD +H +++            Q      G+  CCI         +
Sbjct: 237 RGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSALSGSNKCCINGASTVVTAI 296

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSS 386
           F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ +                 
Sbjct: 297 FGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKN----------------Q 339

Query: 387 QNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
           +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF  
Sbjct: 340 ENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHW 399

Query: 447 SSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
           ++   +  KVD Y++FPL  LDM  YL                   E       S  ++L
Sbjct: 400 TAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYDL 439

Query: 506 FAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            AVV H G  + +GHY  Y     +W+  +D+ +T  +E+TV  A+ Y++FYV++
Sbjct: 440 AAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 494


>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
 gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
          Length = 520

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 245/555 (44%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H        T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQTPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +
Sbjct: 294 TLSPSNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           + +                 +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 SKN----------------QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------L 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
            P +    N L      ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+
Sbjct: 443 EPENSGPENCL------YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDED 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
          Length = 435

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 199/418 (47%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N++     +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 47  RKRKLLENSSLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 106

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 107 AVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 165

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD-QHKPRSQ---------GNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++      PRS           N  CCI       
Sbjct: 166 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVPRSSILQENSTLSANNKCCINGASTVV 225

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ + +S   C       
Sbjct: 226 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKNQESGPVC------- 277

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                    +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 278 ---------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 328

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL                   E   +   S  
Sbjct: 329 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENIGPESCL 368

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 369 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTVTDEETVGKAKAYILFYVER 426


>gi|401841065|gb|EJT43615.1| UBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 473

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 143/559 (25%), Positives = 231/559 (41%), Gaps = 118/559 (21%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           CPH+        +K    ++ C   +     +  +       +CG C + +    + C+ 
Sbjct: 4   CPHIQQVFQNEKSKD-GVLKTCNAARYILNHSIPKEKFLNTMKCGTCHEINSGATFMCLQ 62

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C    + SH   H+ +      H   ++     LFC  C D + + +     +LA
Sbjct: 63  CGFCGCW---NHSHFLSHSKQVG----HIFGINSSNGLLFCFKCEDYLGNINLINDAILA 115

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLN 202
                         +    +  +   P +  R                      GL GL 
Sbjct: 116 --------------KYWDDVSTKTMVPAMERRD---------------------GLSGLI 140

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLSDRHN-RYYCQSKNGVR---LCLACDLDTMFSAI 258
           N+G+TCFM+S+LQ L H P    YF+  RH+ R    +K  VR    C +C LD +   +
Sbjct: 141 NMGSTCFMSSILQCLIHNP----YFI--RHSMRQIHSNKCKVRSPDKCFSCALDKIVHEL 194

Query: 259 F--CGDRMPYSPAK----------FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
           +       P S +            L   W+   +LA Y QQDAHEF+  +++ IH+   
Sbjct: 195 YGVLNTDQPSSSSSATNRQGGFIHLLTCAWKINQSLAGYSQQDAHEFWQFLINEIHQSYV 254

Query: 307 KDQHKPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQ 361
                P+      N  C CI H VF G L S ++C  C   S TT DP +D SLD++  Q
Sbjct: 255 LSLPNPKEVDRANNKRCDCIVHTVFEGSLESSIVCPGCQNNSKTTIDPFMDLSLDIKDKQ 314

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
                                           L  CLD F + E L  D  + C +C   
Sbjct: 315 -------------------------------KLYECLDSFHKKELL-KDFNYHCGECNST 342

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR- 480
           Q+++KQ+ I +LP V    +KRFEH  +   +RK+D +++FP  L+M  Y S++   S  
Sbjct: 343 QDAIKQLGIHRLPSVLVLQLKRFEH-LLNGTNRKLDDFIEFPTYLNMKSYCSTAESESEN 401

Query: 481 -FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWI 538
             GN               P   +EL  +V+H G ++ GHY+ + ++S  +W+K +D+ +
Sbjct: 402 HIGNG------------KVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSMV 449

Query: 539 TEVNENTVRAAQGYMMFYV 557
           + +++  V   Q Y++FY 
Sbjct: 450 SSISQEEVLKEQAYLLFYT 468


>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
 gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
           fascicularis]
          Length = 490

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 236/536 (44%), Gaps = 99/536 (18%)

Query: 68  VCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEIAVDV 116
           VC  +  P  + C+ C++V C      H   H     +  T     +      H + +D 
Sbjct: 1   VCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDC 58

Query: 117 DRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSPDLRE 173
                +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +  L  
Sbjct: 59  SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NSTLNS 114

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP-- 222
           + L VN ++     +           GL NLGNTCFMN++LQ+L         F   P  
Sbjct: 115 KLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAV 163

Query: 223 -LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASN 281
            LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   N
Sbjct: 164 ELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN 222

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHR 325
              Y+QQDAHEF   +LD +H +++            Q       +  CCI         
Sbjct: 223 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTA 282

Query: 326 VFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNS 385
           +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ +                
Sbjct: 283 IFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKN---------------- 325

Query: 386 SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
            +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF 
Sbjct: 326 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH 385

Query: 446 HSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFE 504
            ++   +  KVD Y++FPL  LDM  YL                   E       S  ++
Sbjct: 386 WTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYD 425

Query: 505 LFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 426 LAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 481


>gi|149239857|ref|XP_001525804.1| hypothetical protein LELG_02362 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449927|gb|EDK44183.1| hypothetical protein LELG_02362 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 690

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 153/567 (26%), Positives = 233/567 (41%), Gaps = 111/567 (19%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGG----RAAIRRDSSEVPRCGVCGDSS 73
           +  QP      + ARNG                GG    RAA++R      +C  CG+S 
Sbjct: 204 LISQPIKDTYTYKARNG----------------GGDVIDRAALQRKQLLALKCTDCGNSQ 247

Query: 74  CPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDR 133
              +  C+ C  VSC    H  +  +          H  A+D     L+C  C   V  +
Sbjct: 248 FQEVLICLQCPQVSCSQHSHGHYKEL---------LHMFAIDSKLGLLYCLKCDGYVNSK 298

Query: 134 ---DFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSS 190
              D    V+  H+   I+    E    +  +D +       E + +  N S   +  + 
Sbjct: 299 RLNDIRCEVMGVHSLQSIE----EKADDKNDVDLKQEIGKGSEENGVKENRSN-QNFINP 353

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ---------SKN 241
           N     GL+G  NLG+TCFM+S+LQ   H P +R  F ++ ++ + C+         S +
Sbjct: 354 NMLATMGLKGFVNLGSTCFMSSILQTFIHNPIIRTQFFNNDNHYFNCKLLHDQEVQGSLH 413

Query: 242 GVRLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDG 300
               C+ C +D +F   F       Y     L + W    +LA +++QDAHEF+  +L+ 
Sbjct: 414 EGNACITCSIDKIFKDFFTMQNTEGYGMTYLLATAWYKQKSLAGFQEQDAHEFWQFLLNE 473

Query: 301 IHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
            H     D  +  S      CI+H  F   L+S V C  CG  + T DP   F + LE  
Sbjct: 474 FH----LDHARISSVEKVCSCISHICFGFELQSCVRC-ECGAENITVDPPT-FEMSLE-- 525

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
                             E +  NS       T+ GCLD FTR E L  D K  C+ C  
Sbjct: 526 ---------------LTLEKENSNS------ITVGGCLDSFTREEIL--DTKISCKSCLK 562

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
              + + + ++  P V    +KRF HS     S KV+  +  PL LDM  Y         
Sbjct: 563 ESGASRTLRLKTTPPVLSIQLKRFNHSISNDKSSKVEAAVDVPLFLDMNKY--------- 613

Query: 481 FGNRFFPFDGDESNTLNEPSSE------FELFAVVTHTGKLDAGHYVTYLRLS-NKWYKC 533
                         T+NE +        +ELF+VV H G ++ GHY+ Y + S  +W+K 
Sbjct: 614 --------------TINEQADNNSKPILYELFSVVCHLGLVNTGHYIVYTKNSQGRWFKF 659

Query: 534 DDAWITEVNENTVRAA---QGYMMFYV 557
           DD+ IT  +E +  +A    GY+++Y+
Sbjct: 660 DDSVITIEDETSAISAIRSTGYLLYYI 686


>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
          Length = 491

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 236/536 (44%), Gaps = 99/536 (18%)

Query: 68  VCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEIAVDV 116
           VC  +  P  + C+ C++V C      H   H     +  T     +      H + +D 
Sbjct: 2   VCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMDC 59

Query: 117 DRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSPDLRE 173
                +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +  L  
Sbjct: 60  SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NSTLNS 115

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP-- 222
           + L VN ++     +           GL NLGNTCFMN++LQ+L         F   P  
Sbjct: 116 KLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAV 164

Query: 223 -LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASN 281
            LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   N
Sbjct: 165 ELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN 223

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHR 325
              Y+QQDAHEF   +LD +H +++            Q       +  CCI         
Sbjct: 224 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTA 283

Query: 326 VFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNS 385
           +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ +                
Sbjct: 284 IFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKN---------------- 326

Query: 386 SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
            +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF 
Sbjct: 327 QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH 386

Query: 446 HSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFE 504
            ++   +  KVD Y++FPL  LDM  YL                   E       S  ++
Sbjct: 387 WTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYD 426

Query: 505 LFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 427 LAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 482


>gi|367010412|ref|XP_003679707.1| hypothetical protein TDEL_0B03670 [Torulaspora delbrueckii]
 gi|359747365|emb|CCE90496.1| hypothetical protein TDEL_0B03670 [Torulaspora delbrueckii]
          Length = 463

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 217/507 (42%), Gaps = 109/507 (21%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           RC  C + +    + C+ C    C    +  H  +H+ K      H   ++     LFC 
Sbjct: 45  RCSECHEINSGSNFMCLQCGFCGCW---NGEHFLMHSKKVG----HVFGINSSNGLLFCF 97

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
            C D + + +   A +L               +    +  +   P +  R          
Sbjct: 98  KCSDYIGNNELIIASMLN--------------KYWDDVSIKTVVPSVERRD--------- 134

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
                       GL GL NLG+TCFM+S+LQ L   P   N+ +S  H++  C  ++  +
Sbjct: 135 ------------GLHGLLNLGSTCFMSSILQILIRNPYFFNFSISQSHSK-KCPIQDP-K 180

Query: 245 LCLACDLDTMF------SAIFCGDRMP---YSP-AKFLYSWWRHASNLASYEQQDAHEFF 294
            C++C L+ M       SA   GD  P   YS     L   W+   NLA Y QQDAHEF+
Sbjct: 181 SCISCALEKMVCEFYGSSAYSTGDVEPQAMYSGFIGLLVCSWKINENLAGYSQQDAHEFW 240

Query: 295 ISMLDGIHEKVEKDQHKPRSQGNGD---CCIAHRVFSGILRSDVMCMACGFTS-TTFDPC 350
             +L+ +H   +    K  +    D    CIAH  F G+L+S ++C  C   S TT DP 
Sbjct: 241 QFLLNQLHHDFQVCSGKGVNDAISDDLCTCIAHSTFQGLLKSSIVCPDCQNDSKTTIDPF 300

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
           +D SLD++                                 S L  CLD F + ERL  D
Sbjct: 301 MDLSLDIKDK-------------------------------SNLYNCLDSFHKKERL-HD 328

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAP 470
             + C  C   Q+++K++SI KLP V    +KRFEH  +   S K++ ++++P  L+M  
Sbjct: 329 FNYHCPNCNTSQDAIKRLSIYKLPSVLVLQLKRFEH-LLNGNSLKLNDFIEYPPYLNMRD 387

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNK- 529
           Y SS               GD    ++ P   +EL  VV H G ++ GHYV   +++ + 
Sbjct: 388 YCSS---------------GDSD--VDVPDLIYELIGVVAHKGTVNEGHYVATTKVAGRQ 430

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFY 556
           W+K +D+ ++ V +      Q Y++FY
Sbjct: 431 WFKFNDSMVSSVTQEEALNEQAYLLFY 457


>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
           harrisii]
          Length = 711

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 236/536 (44%), Gaps = 99/536 (18%)

Query: 68  VCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI-----HATKTSSACSHEIAVDV 116
           VC  +  P  + C+ C++V C      H   H     I       T+      H + +D 
Sbjct: 222 VCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNHKKTEKQEKVQHTVCMDC 279

Query: 117 DRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSPDLRE 173
                +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +  L  
Sbjct: 280 SSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NSSLNS 335

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP-- 222
           + L VN ++     +           GL NLGNTCFMN++LQ+L         F   P  
Sbjct: 336 KLLKVNGSTTALCAT-----------GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAV 384

Query: 223 -LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASN 281
            LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   N
Sbjct: 385 ELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN 443

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHR 325
              Y+QQDAHEF   +LD +H +++            Q       +  CCI         
Sbjct: 444 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTA 503

Query: 326 VFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNS 385
           +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ + ++   C         
Sbjct: 504 IFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKNQENGPLC--------- 553

Query: 386 SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
                  +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF 
Sbjct: 554 -------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH 606

Query: 446 HSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFE 504
            ++   +  KVD Y++FPL  LDM  YL                   E       S  ++
Sbjct: 607 WTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYD 646

Query: 505 LFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 647 LAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 702


>gi|384252824|gb|EIE26299.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Coccomyxa
           subellipsoidea C-169]
          Length = 1005

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 135/244 (55%), Gaps = 35/244 (14%)

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           CM CAAV   +  H S    HA+       H +A+DV R EL+CCACRD +YD DFD  V
Sbjct: 49  CMHCAAVGKGLERHCSE---HAST-----GHPLALDVQRLELYCCACRDNIYDPDFDRCV 100

Query: 140 VLAHTTSI-------------IQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDS 186
             A   ++                +   N  KR+RI+     P L     +         
Sbjct: 101 SGAAALALSVDNSSAAASGAKAPPAAAANGHKRKRIEESASGPQLMAARGI--------- 151

Query: 187 MSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC 246
             S   DLP GLRGL+NLGNTCFMNSVLQAL H P LRN++L   H+   C  ++  + C
Sbjct: 152 --SRAHDLPFGLRGLSNLGNTCFMNSVLQALLHAPLLRNFYLGGSHSAALCPHRHS-KPC 208

Query: 247 LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHAS-NLASYEQQDAHEFFISMLDGI-HEK 304
           L+C+LD +FSA + G   P+SPA FLY+WW HA  +LA Y+QQDAHEF++  L G+ H +
Sbjct: 209 LSCELDGLFSAAYSGASSPFSPAAFLYAWWCHADHHLAGYQQQDAHEFYLFALSGLSHSR 268

Query: 305 VEKD 308
           +  D
Sbjct: 269 LPSD 272



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 9/171 (5%)

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
           G ++L+GCL RF RPE LG  +++ C++C+++Q ++KQMSIR+LP V C H+KRFEH  V
Sbjct: 833 GAASLVGCLHRFVRPESLGPGERWTCERCRLQQRAVKQMSIRRLPPVLCLHVKRFEHMGV 892

Query: 450 RKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE----FEL 505
            K   K++  L F   LD+ PYLSS++L+ RF  +  P      N L++ S E    +EL
Sbjct: 893 GK---KLNTPLLFSAHLDVRPYLSSTVLQKRFTVKRPPE--RRKNGLSDDSDEVSVIYEL 947

Query: 506 FAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           +AVV H G L  GHYV Y++  N WY CDD ++ EV+E T  +   YM++Y
Sbjct: 948 YAVVCHRGNLQGGHYVAYVKCGNSWYLCDDGFVLEVDEATACSPNAYMLYY 998



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
            R+F G+L+SDVMC ACG TST  DP +D SLD++
Sbjct: 372 QRIFGGLLQSDVMCCACGHTSTALDPFLDISLDIK 406


>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
           lupus familiaris]
          Length = 520

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 246/555 (44%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKPQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTAAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           + +                 +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 SKN----------------QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------L 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
            P +    + L      ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+
Sbjct: 443 EPENSGPEHCL------YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDED 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
          Length = 515

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 227/517 (43%), Gaps = 69/517 (13%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATK--TSSACSHEIAVDVDRAELFC 123
           C VC  +    L+ C+ C  VSC       ++A HA          H + +D     +FC
Sbjct: 30  CSVCKTNK--SLWLCLCCGLVSC-----GRYIAGHAKSHHKEKEPLHSVCLDCHNMAIFC 82

Query: 124 CACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
             C + V +   +  +    +     S+  EN  K  R   R  S D    S    N+  
Sbjct: 83  YICDEFVINDTPNGDIEKIRSRLQDISASAENQTKENRQLRRRCSSD----STSTENSRK 138

Query: 184 IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHT----------PPLRNYFLSDRHN 233
               +     L R   GL NLGNTCFMN+VLQ+L +           P L       +  
Sbjct: 139 RQKKTDDKKRLRRS--GLRNLGNTCFMNAVLQSLSNIQTFCGYIQQLPSLEQKMSKKKIT 196

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
              C   N V +    +L     A++ G +   SP       W+       Y+QQDAHEF
Sbjct: 197 TRSCTEGNDVFV--VEELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHEF 254

Query: 294 FISMLDGIHEKVE-----KDQHKPRS----QGNGDCCIAHRVFSGILRSDVMCMACGFTS 344
              +LD +H ++          +P S       G   +   +F GIL+S+V C+ CG  S
Sbjct: 255 MRYLLDRLHTELMTLIPYNATVRPNSPYVGSPLGKSSVVTAIFGGILQSEVNCLICGMES 314

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
              DP +D SLD+ P++ +  KT + K            N    C +S    CL  FT  
Sbjct: 315 KKHDPFLDISLDI-PSKFTC-KTPNPK------------NGEIVCDLS---DCLSSFTDV 357

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L   + + C  C+ RQ S K+  IR+LP V C H+KRF  S+  ++  KVD ++ FPL
Sbjct: 358 EELEDTELYMCANCKCRQRSTKKFWIRRLPNVLCLHLKRFRWSTYLRV--KVDTHINFPL 415

Query: 465 -SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVT 522
             L+M  ++  ++  +R            +++ +   S+++L AVV H G    +GHY +
Sbjct: 416 RGLEMNHFMLDNLHETR------------NSSASGSQSKYDLAAVVVHHGSGAGSGHYTS 463

Query: 523 YLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           Y      WY  +D+ +T+ +E TV   + Y++FYV++
Sbjct: 464 YAVHEGGWYHFNDSSVTQCDEETVAKCKAYILFYVRR 500


>gi|342321481|gb|EGU13414.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
           204091]
          Length = 656

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 177/380 (46%), Gaps = 61/380 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH-NRYYCQSKN 241
           PID+ +S     P G  GLNNLGNTCF+NS LQ L HTPPL  Y  S +H +   C+ K 
Sbjct: 118 PIDTNTSWPKPFPVGA-GLNNLGNTCFLNSALQVLLHTPPLLRYLESSQHPSENNCKCKQ 176

Query: 242 GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGI 301
               C+ C +       F G +  YSP   + +  + A ++    Q+D+HEF    +D +
Sbjct: 177 QKDFCMICTMRACARVSFTGRQRSYSPNPVVRNLKKIAKHMRLGRQEDSHEFLRFSIDAM 236

Query: 302 HEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
                  +     Q   +    H++F G LRS V C+ACG  S TFD  +D SLDL    
Sbjct: 237 QAAALYGKSPKLEQKIKETTFVHQIFGGRLRSRVHCLACGHNSDTFDSILDLSLDL---- 292

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
                    ++N                   TL   LD F R ++L    K+ C++C+  
Sbjct: 293 -------GNRAN-------------------TLKDALDNFVRIDKLSGQNKYKCEKCKKL 326

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRF 481
             + K  +I   PLV   H+KRF  +      RK+   L++P +L + PY+         
Sbjct: 327 VNAEKYFAIEDAPLVLTVHLKRFSPT-----GRKITGQLRYPETLHLGPYM--------- 372

Query: 482 GNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD-AGHYVTYLRLSN-KWYKCDDAWIT 539
                      SN   +PS  + L+ ++ H+G    +GHY +Y+R S+ KW+  +D +++
Sbjct: 373 -----------SNPKVDPS--YRLYGIILHSGGGPHSGHYTSYVRSSSGKWHDMNDDYVS 419

Query: 540 EVNENTVRAAQGYMMFYVQK 559
            ++   +     Y++FYV++
Sbjct: 420 SLSHPPLSDRDAYVLFYVRE 439


>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
           troglodytes]
          Length = 498

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 235/536 (43%), Gaps = 99/536 (18%)

Query: 67  GVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEIAVD 115
            VC  +  P  + C+ C++V C      H   H     +  T     +      H + +D
Sbjct: 8   AVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMD 65

Query: 116 VDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSPDLR 172
                 +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +  L 
Sbjct: 66  CSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLE----NSTLN 121

Query: 173 ERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP- 222
            + L VN ++     +           GL NLGNTCFMN++LQ+L         F   P 
Sbjct: 122 SKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPA 170

Query: 223 --LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHAS 280
             LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   
Sbjct: 171 VELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP 229

Query: 281 NLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AH 324
           N   Y+QQDAHEF   +LD +H +++            Q       +  CCI        
Sbjct: 230 NFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVT 289

Query: 325 RVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMN 384
            +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ +               
Sbjct: 290 AIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKN--------------- 333

Query: 385 SSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRF 444
             +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF
Sbjct: 334 -QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRF 392

Query: 445 EHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEF 503
             ++   +  KVD Y++FPL  LDM  YL                   E       S  +
Sbjct: 393 HWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLY 432

Query: 504 ELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           +L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 433 DLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVE 488


>gi|444318954|ref|XP_004180134.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
 gi|387513176|emb|CCH60615.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
          Length = 483

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 240/560 (42%), Gaps = 110/560 (19%)

Query: 23  CPHLADFHARNGTK-PFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACM 81
           C HL +  + N  K  F  +      K    R +++        C  C   +    + C+
Sbjct: 4   CQHLTEIFSNNSKKDEFLTVY--YSTKSTLSRTSVQDKLRYTMICSECHQLNNGTSFLCI 61

Query: 82  ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 141
            C    C    + SH   H   T+    H   V+     L+C  C D V+          
Sbjct: 62  QCGNCGCW---NGSHSMNHYKSTN----HPFGVNSLNGLLYCFHCNDYVF---------- 104

Query: 142 AHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGL 201
                               ++    +P +++    ++N + I +++ +      GL+GL
Sbjct: 105 --------------------VEELLLTPKIQKYWNRISNETSIPTLTQA-----HGLKGL 139

Query: 202 NNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCG 261
            N+G+TC+M+S+LQ L H P   +  +   H   YC+ ++ ++ C++C +D + S  +  
Sbjct: 140 VNMGSTCYMSSILQCLMHNPLFVDLSMKGVHYN-YCKIQDPMK-CMSCAIDNIISETYGN 197

Query: 262 DRMPYSPA--KFLYSWWRHASNLASYEQQDAHEFFISMLDGIH-----------EKVEKD 308
            +   +      L   WR   NLA Y QQDAHEF   +L+ +H            K E +
Sbjct: 198 KKTTPNEGLVDILNCSWRVNKNLAGYTQQDAHEFLQFILNQMHNDYKLNEIHDTNKQEMN 257

Query: 309 QHKPRSQGNGDC---------CIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLE 358
               ++  NG+          C+ H +F G L+S + C  C   S TT DP +D SLD++
Sbjct: 258 GTDFKTMVNGNSSKEHLHLCNCLPHTIFQGFLKSIISCSECKAQSQTTIDPYMDLSLDVK 317

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
                                          G STL  CL+ F R ERL  D  + C++C
Sbjct: 318 -------------------------------GKSTLYECLESFHRTERL-HDFTYNCKKC 345

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
              Q++ +Q+SI KL  +    +KRFEH  +   S K++ +++FPL L+M  + ++    
Sbjct: 346 NKSQDANRQLSILKLAPIMVIQLKRFEH-LITGSSVKINDFVEFPLHLNMKSFCTAPTPD 404

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNK-WYKCDDAW 537
           +       P + +E    + P   +EL  +VTH G ++ GHY+TY + ++  WY+ +D+ 
Sbjct: 405 TD------PTNLNEKTNKSTPDMIYELTGIVTHRGTVNEGHYITYTKTADGVWYQFNDSV 458

Query: 538 ITEVNENTVRAAQGYMMFYV 557
           + +V    +   Q Y++ Y 
Sbjct: 459 VMKVPLEQMLKEQAYLLIYT 478


>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
          Length = 520

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 152/555 (27%), Positives = 243/555 (43%), Gaps = 106/555 (19%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKP 312
           +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++            Q   
Sbjct: 234 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENS 293

Query: 313 RSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
               +  CCI         +F G L+++V C+ CG  S  FDP +D SLD+ P+Q  + +
Sbjct: 294 TLSASNKCCINGASTVVTAIFGGFLQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKR 352

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 353 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 396

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 397 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDIYVEFPLRGLDMKCYLL------------ 442

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+
Sbjct: 443 ------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDED 496

Query: 545 TVRAAQGYMMFYVQK 559
           TV  A+ Y++FYV++
Sbjct: 497 TVVKAKAYILFYVER 511


>gi|344233822|gb|EGV65692.1| cysteine proteinase [Candida tenuis ATCC 10573]
          Length = 481

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 226/508 (44%), Gaps = 111/508 (21%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHS-SHVAIHATKTSSACSHEIAVDVDRAELFC 123
           +C  C   +      C+ C  + C +  H  +H  ++         H  A+D +   ++C
Sbjct: 66  KCSNCKLCNFNNNLICLQCPNIGCQINNHGYNHYKLN--------QHVFAIDSENGLIYC 117

Query: 124 CACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
             C   + D+  +                        R + RP      E SL +    P
Sbjct: 118 FKCNTYINDKALNDI----------------------RNEVRP------ESSLEL----P 145

Query: 184 IDSMSSSNGDLP-----RGLRGLNNLGNTCFMNSVLQALFHTPPL-RNYFLSDRHNRYYC 237
               +S + D P     RGL+G  N G+TCF++S+LQ L H P L R +F SD H  + C
Sbjct: 146 ESDDTSDHYDTPEETSIRGLKGFVNFGSTCFISSILQTLIHNPMLKREFFNSDEH-YFNC 204

Query: 238 QSKNGVRLCLACDLDTMFSAIFCG-DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
                V  C+ C +D +F+  F   +   +     L + W    +L  YE+QDAHEF+  
Sbjct: 205 D----VSECITCSIDKIFTEFFTSSNNDSFGMTNLLINSWYKNKSLTGYEEQDAHEFWQY 260

Query: 297 MLDGIHE---KVEKDQHKPRSQGNG--DC-CIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           +L+  H+   +++ D  +    G+   DC CI H+ F+G L S +MC  C  T+ T DP 
Sbjct: 261 LLNEFHKDHMRLKSDMGENDVFGHTYEDCDCITHKHFAGELESLIMCSDCDNTTRTIDPI 320

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
           +D SL+L           +   +HS                 T+  CL+ FT+ E L   
Sbjct: 321 MDLSLEL-----------TNLPDHS-----------------TVYDCLNLFTKEETL--- 349

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAP 470
           + + CQ C    +  K + I K+  V    +KRF+H+    +  K D  ++ PL L+++ 
Sbjct: 350 ENYKCQFCNKNSKPKKSLKINKMSSVLSIQLKRFKHNVNSFI--KNDIPIRNPLYLNLSD 407

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNK 529
           YLS               D +E +T    +  +ELFA+V H G ++ GHYV  ++  +N+
Sbjct: 408 YLSQ--------------DSNEGST----NQFYELFALVVHIGSVNTGHYVVLIKTENNQ 449

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYV 557
           W K DD+ IT V +  + +   Y++FY+
Sbjct: 450 WLKFDDSIITLVPQQEIESINAYLLFYM 477


>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
            kowalevskii]
          Length = 1150

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 196/418 (46%), Gaps = 80/418 (19%)

Query: 165  RPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR 224
            RP  P++  R+  V+ A+ + +++   G+  R L GL NLGNTCFMNS++Q+L ++ PL 
Sbjct: 776  RPSRPNVEIRTSDVS-AAQVRNLNPVFGNQGRALTGLKNLGNTCFMNSIIQSLANSTPLA 834

Query: 225  NYFLSDRHNRYYCQSKN--GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNL 282
             YF+   + +Y+   +N  G    +A +   + +AI+ G     SP  F  +  +     
Sbjct: 835  TYFIEGSY-KYHINRENKLGRGGKVAEEFAVVINAIWSGHYRSISPRDFKLTVSKFVPQF 893

Query: 283  ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC--------------------CI 322
            A YEQQD+ EF + +LDG+HE + + +H+   +   +                      I
Sbjct: 894  AGYEQQDSQEFLLFLLDGLHEDLNRVKHRKYIEEKDNTHLTDDQAAQLAWNNHKRLNESI 953

Query: 323  AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
               +F G  +S + C+ C   S T+D  +  SL L              SN+ C      
Sbjct: 954  MVELFQGQFKSTLQCLFCQKKSVTYDAFMYLSLPL-------------LSNNRC------ 994

Query: 383  MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                      +L  C+  FT+ E++G   K+FC +C+V +E+ K++ I KLP +   H+K
Sbjct: 995  ----------SLYDCVKNFTKLEKVGGADKWFCPKCKVHREANKRIEIWKLPHILLIHLK 1044

Query: 443  RFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
            RF +  V +   + D  + FP+ +LDM+ ++     RS +                    
Sbjct: 1045 RFSYEGVWRHKLQTD--VDFPINNLDMSSHVIGPKKRSSYN------------------- 1083

Query: 502  EFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
               L+AV  H G +D GHY  + +  +  KWYK DD  + E+    V+++  Y++FY 
Sbjct: 1084 ---LYAVSNHYGTMDGGHYTAFCKNAIRQKWYKFDDTEVYEMPTRNVKSSAAYILFYT 1138


>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
          Length = 479

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 221/513 (43%), Gaps = 68/513 (13%)

Query: 68  VCGDSSCPRLYACMACAAVSC--HVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCA 125
           VC     P  + C+ C  + C  +V   + H  +H      A +H + +D D   +FC  
Sbjct: 4   VCKTEQSP--WICVKCGRIHCGRYV---NGHAKLHH---EEATNHAVCMDCDNLAVFCYK 55

Query: 126 CRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPID 185
           C + V +      +          SS    +R++ R   R  S D +E           D
Sbjct: 56  CDEFVINDTAPGHLEKLRQQLKSISSAQARMRQKSR---RRCSTDSQENEKATKKIKKDD 112

Query: 186 SMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF--LSDRHNRYYCQSKNGV 243
            +S      PR   GL NLGNTCFMN+VLQ+L +      Y   L     +     K   
Sbjct: 113 RLSK-----PRS-SGLRNLGNTCFMNAVLQSLSNIQQFCGYIKQLPSLEEKVTKVKKIQT 166

Query: 244 R--------LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
           R        + L  +L     A++ G +   SP       W+       Y+QQDAHEF  
Sbjct: 167 RKSKTPEEDVLLVEELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGYQQQDAHEFMR 226

Query: 296 SMLDGIHEKVEKDQHKPRSQG-----NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
            +LD +H ++      P S        G   I   +F G+L+++V C+ CG  S   DP 
Sbjct: 227 YLLDRLHTELLTLLPYPNSDSPFIGPKGKSTIVTAIFGGLLQNEVTCLVCGVESKKHDPF 286

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
           +D SLD+ P Q  + +    K      C              TL  CL  FT  E L   
Sbjct: 287 LDLSLDI-PQQFCT-RGVKAKDGEQLRC--------------TLSDCLQSFTELEELEES 330

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMA 469
           + + C  C+ +Q S K+  IR+LP V C HIKRF   S  ++  K++ +++FPL  L+M 
Sbjct: 331 ELYMCSTCKKKQRSTKKFWIRRLPNVLCLHIKRFRWQSFFRV--KLETFVEFPLEGLNMH 388

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSN 528
            Y+  ++  +R         G  S      S+E++L AVV H G    +GHY +Y R   
Sbjct: 389 KYILDNLHETR---------GSGSG-----SNEYDLAAVVVHHGSGAGSGHYTSYARHEG 434

Query: 529 KWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           +W+  +D+ +T     TV   + Y++FY+++  
Sbjct: 435 QWFHFNDSTVTPCEPETVAKCKAYILFYIRRQF 467


>gi|154277884|ref|XP_001539775.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150413360|gb|EDN08743.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 433

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 206/488 (42%), Gaps = 110/488 (22%)

Query: 77  LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFD 136
            Y C+ C+ V C +    +H             H+   D     +FC  C D VYD + +
Sbjct: 49  FYPCLECSTV-CTLVSRYTHF--------QNSGHKFFTDSRTGTIFCLGCDDYVYDAELE 99

Query: 137 AAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPR 196
           + +               ++ K+R++D    S +  +++ ++ NA+              
Sbjct: 100 SFLF------------DPSVLKKRKLD----SGNDDDQAYVIANANKRVCGK-------E 136

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           G+RGL NLG TC+MN +LQ L H P L  YFL + H+ Y C  +N    C++C +   F+
Sbjct: 137 GVRGLFNLGQTCYMNVILQTLLHDPLLTTYFLGNNHHTYDCTIQN----CISCAVSEAFA 192

Query: 257 AIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD-GIHEKVEKDQHKPRS 314
                D+   +     L + WR +             F +  L  G H+ VE        
Sbjct: 193 EFNNDDKTEGFGALNLLLASWRSSP------------FLVDKLHAGAHDHVENH------ 234

Query: 315 QGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
             N  C C  H  F G LRS V C  CG  + T D  +D SLD++  +            
Sbjct: 235 --NKTCHCFFHNAFYGKLRSSVTCDKCGNVTQTEDQMIDLSLDVQVQK------------ 280

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
                +   +   ++    TL GCL  FT PE+L +D   +  +  +  ++ +Q      
Sbjct: 281 -----KKRALGGGESTATPTLDGCLQSFTSPEKLMADA--YNSEAAILTQNFRQ------ 327

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
                    RFEH+    +S KV+  + FPLS++M PY + +  ++  G+  F +D    
Sbjct: 328 ---------RFEHT--LSVSEKVEGKIDFPLSINMLPYTTRAHCKNEGGHSNFLYD---- 372

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYM 553
                      L + V H GKLDAGHY  Y R   +WY  +D  +T VNE  V AA  Y+
Sbjct: 373 -----------LSSAVVHKGKLDAGHYYVYCRQGEQWYLFNDDQVTVVNEAEVLAADAYL 421

Query: 554 MFYVQKML 561
           +FY    L
Sbjct: 422 LFYTLHAL 429


>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
           aries]
          Length = 476

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 200/418 (47%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N++     +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 88  RKRKLLENSSLNSKLLKVNGSTTAVCATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 147

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 148 AVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 206

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 207 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVV 266

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ + ++  +C       
Sbjct: 267 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKNQENGPTC------- 318

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                    +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 319 ---------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 369

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL              P +    N L      
Sbjct: 370 FHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------LEPENSGPENCL------ 409

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+TV  A+ Y++FYV++
Sbjct: 410 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 467


>gi|242789882|ref|XP_002481453.1| ubiquitin C-terminal hydrolase Ubp8, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218718041|gb|EED17461.1| ubiquitin C-terminal hydrolase Ubp8, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 576

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 175/375 (46%), Gaps = 52/375 (13%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
            G+RGL NLG TC+MN VLQ L H P L  +FL + H  Y CQ    +  C+ C +   F
Sbjct: 245 EGVRGLFNLGQTCYMNVVLQTLLHEPLLNAFFLGNGHKYYDCQ----IDGCVLCAMSRAF 300

Query: 256 SAI-FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKP 312
           +    C  +  ++    LYS W++   LA   QQDAHEF+  +  G+H     E DQ K 
Sbjct: 301 AEFNGCDKKDGFTAETLLYSTWKNHPPLAGNHQQDAHEFYQFLAGGLHTASSDENDQLKC 360

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
                   C   +   G  +S + C  C  TS T  P ++ SLD++              
Sbjct: 361 N-------CFFCKALFGKFQSTLTCPICKHTSPTEQPLLELSLDVQL------------- 400

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL-KQMSIR 431
            HS   + +G    +     TL GCL  +  PE L   + + CQ C    + L KQ+ I+
Sbjct: 401 -HSKKRQMNG--KLRGSSTPTLAGCLQSWVTPEELIM-EGYQCQGCHSYPDKLTKQLRIK 456

Query: 432 KLPLVSCFHIKRFEH--SSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           +LP + C  +KRFE   S  RKM  K+D    FPL ++M PY  +S    +         
Sbjct: 457 QLPAMLCMQMKRFEQTDSETRKMQGKID----FPLEINMQPYTVASPTSKK--------- 503

Query: 490 GDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
                T+      ++L + + H G  L+ GHY+ Y+R  ++W   +D  +T V+E  V  
Sbjct: 504 ----TTIRSDIYMYDLASAIVHDGAGLNEGHYIAYIRQGDRWCLFNDDKVTLVSEGDVLN 559

Query: 549 AQGYMMFYVQKMLYY 563
           A  Y++FY  + L +
Sbjct: 560 ADAYLLFYTLRSLSF 574


>gi|366989503|ref|XP_003674519.1| hypothetical protein NCAS_0B00580 [Naumovozyma castellii CBS 4309]
 gi|342300383|emb|CCC68142.1| hypothetical protein NCAS_0B00580 [Naumovozyma castellii CBS 4309]
          Length = 466

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 216/525 (41%), Gaps = 115/525 (21%)

Query: 56  IRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVD 115
           I+       +C  C + +    + C+ C  V C    + SH   H  +      H   ++
Sbjct: 37  IKEKLLHTMKCSQCQEINAGSTFMCLQCDFVGCW---NGSHFITHMKRFG----HVFGIN 89

Query: 116 VDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERS 175
                LFC  C D +            H  +I  S              + W        
Sbjct: 90  SSNGLLFCFKCMDYI-----------GHLETINYSMLN-----------KYWDD------ 121

Query: 176 LMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
             ++  + I S    +G     L GL N+G+TCFM+S+LQAL H P + NY +S  H   
Sbjct: 122 --ISTKTTIPSQERRDG-----LFGLVNMGSTCFMSSILQALIHNPYIVNYSMSQTH-FV 173

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMP-----------------YSPAKFLYSWWRH 278
            C  KN   LC++C LD M    +   ++                   +    L    + 
Sbjct: 174 NCSIKNS-SLCMSCALDAMIIEFYGQSKLQPISSSSSSSSSSSSSSPSAFISLLTCSLKI 232

Query: 279 ASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCM 338
             N A Y QQDAHEF    L+ +H+  ++D      + N   C+AH +F G L+S ++C 
Sbjct: 233 NENFAGYSQQDAHEFLQYFLNQLHQDYKRDSSHNEQENNCP-CVAHSIFQGELKSSIVCP 291

Query: 339 ACGFTS-TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGC 397
            C   S T  DP +D SLD++                                 + L  C
Sbjct: 292 ECQNDSKTIIDPFMDLSLDIKDK-------------------------------TDLYQC 320

Query: 398 LDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVD 457
           LD F + E+L  D  + C +C    + +KQ +I KLP +    +KRFEH  V   + K++
Sbjct: 321 LDSFHKKEKL-HDFNYHCSRCNTSLDPIKQFTINKLPPMLVLQLKRFEH-FVNGTNVKLN 378

Query: 458 RYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDA 517
            ++Q+PL L+M  Y                   D +     P   +EL  +++H G ++ 
Sbjct: 379 EFVQYPLYLNMRDYC------------------DRNTNQETPDIIYELTGILSHIGSINE 420

Query: 518 GHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           GHYV  L++++ +W+K +D+ I+ + E+     Q Y++FY  + +
Sbjct: 421 GHYVVVLKINDGRWFKFNDSMISVIKEDEALKQQAYLLFYTVRQI 465


>gi|443714551|gb|ELU06915.1| hypothetical protein CAPTEDRAFT_166013 [Capitella teleta]
          Length = 981

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 209/445 (46%), Gaps = 88/445 (19%)

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVN---NASPIDSMSSSNGDLPRGLR 199
           + T ++Q  + EN    R +  R   P  +  +L +    +A+ + +++ + G +  GL 
Sbjct: 584 NITKMVQDEETENRTVPRPLVERTSKPRPKADTLQIRTDVSAAKVRNLNPTWGSVAPGLC 643

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH----NRYYCQSKNGVRLCLACDLDTMF 255
           GL N+GNTC+MNS++Q L +T PL  YFLSD +    N+     K GV   +A +   + 
Sbjct: 644 GLRNIGNTCYMNSIIQCLSNTIPLTVYFLSDIYVQDINKENVFGKGGV---IAEEYSVVN 700

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKP 312
             ++ G     +P     +  R  S  AS+E QD+ E  + ++DG+HE   KV+K    P
Sbjct: 701 KGLWSGQYKSINPRDLWSTLGRFYSLFASHEHQDSQELLLFLMDGLHEDLNKVKKRPQLP 760

Query: 313 RSQGNG-----------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
               NG                 +  I   +F G  +S V CM C   S TFD  V+ SL
Sbjct: 761 EQNNNGVSDQQAASTAWYMHKQINESIIVELFQGQFKSTVTCMTCSKESVTFDAFVNLSL 820

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
            +   QG+ +                           +L  CL  F++ E +  + ++ C
Sbjct: 821 PIA--QGTRV---------------------------SLHECLSLFSKRESMTGESRWDC 851

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR-KVDRYLQFPLS-LDMAPYLS 473
            QC+ ++E+ K++ + KLP +   H+KRF +   R M R K+  ++ +PL  LDM  Y++
Sbjct: 852 PQCKCKREATKRIVVWKLPPILIIHLKRFYY---RGMWRDKITTHVDYPLEGLDMGRYVA 908

Query: 474 SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWY 531
                   G +  P               F L+AV  H G LD GHY   ++   ++KWY
Sbjct: 909 --------GPKKPPV--------------FNLYAVSNHYGTLDGGHYTASVKNAKNHKWY 946

Query: 532 KCDDAWITEVNENTVRAAQGYMMFY 556
           K DD  + EV+++ V+++ GY++FY
Sbjct: 947 KYDDTEVYEVSKSDVQSSAGYILFY 971


>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
           abelii]
 gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
           [Nomascus leucogenys]
          Length = 476

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 195/418 (46%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N+      +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 88  RKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 147

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 148 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 206

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 207 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 266

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++                
Sbjct: 267 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS---------------- 309

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
            + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 310 KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 369

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL                   E       S  
Sbjct: 370 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCL 409

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 410 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 467


>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
          Length = 431

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 195/418 (46%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N+      +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 43  RKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 102

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 103 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 161

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 162 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 221

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ + ++   C       
Sbjct: 222 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKNQENGPVC------- 273

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                    +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 274 ---------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 324

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL                   E       S  
Sbjct: 325 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCL 364

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 365 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 422


>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
           [Otolemur garnettii]
          Length = 476

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 199/418 (47%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N++     +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 88  RKRKLVENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 147

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 148 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 206

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----QHKPRSQGN------GDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++       H    Q N        CCI       
Sbjct: 207 PNFRGYQQQDAHEFMRYLLDHLHLELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVV 266

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++                
Sbjct: 267 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS---------------- 309

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
            + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 310 KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 369

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL              P +    N L      
Sbjct: 370 FHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------LEPENSGPENCL------ 409

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 410 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 467


>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
          Length = 431

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 195/418 (46%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N+      +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 43  RKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 102

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 103 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 161

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 162 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 221

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ + ++   C       
Sbjct: 222 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKNQENGPVC------- 273

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                    +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 274 ---------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 324

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL                   E       S  
Sbjct: 325 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCL 364

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 365 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 422


>gi|395514897|ref|XP_003761647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like, partial
           [Sarcophilus harrisii]
          Length = 229

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 136/229 (59%), Gaps = 15/229 (6%)

Query: 337 CMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
           C +    STT DP  D SLDL  +       S        N E      S   G +TL  
Sbjct: 15  CSSYSGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGE------SHVSGTTTLTD 68

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+
Sbjct: 69  CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKI 126

Query: 457 DRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD 516
             Y+ FPL LDM P+++SS   SR   ++       +++LN   +++ LFAVV H G L+
Sbjct: 127 TTYVSFPLELDMTPFMASSK-ESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLE 180

Query: 517 AGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           +GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 181 SGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 229


>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
          Length = 435

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 195/418 (46%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N+      +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 47  RKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 106

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 107 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 165

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 166 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 225

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ + ++   C       
Sbjct: 226 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKNQENGPVC------- 277

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                    +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 278 ---------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 328

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL                   E       S  
Sbjct: 329 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGLESCL 368

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 369 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 426


>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
          Length = 482

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 230/543 (42%), Gaps = 120/543 (22%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI--- 99
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I   
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLL 69

Query: 100 --HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
               ++      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYS 274
           Q+L                             L  +      A++ G +  +SP    Y 
Sbjct: 175 QSL---------------------------RSLVEEFRKTLCALWQGSQTAFSPESLFYV 207

Query: 275 WWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI-- 322
            W+   N   Y+QQDAHEF   +LD +H +++            Q K     +  CCI  
Sbjct: 208 VWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEKSTLSASNKCCING 267

Query: 323 ----AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
                  +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++           
Sbjct: 268 ASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS----------- 315

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP   C
Sbjct: 316 -----KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALC 370

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            H+KRF  ++   +  KVD Y+QFPL  LDM  YL                   E     
Sbjct: 371 LHLKRFHWTAY--LRNKVDTYVQFPLRGLDMKCYLL------------------EPENSG 410

Query: 498 EPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FY
Sbjct: 411 PDSCLYDLAAVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETVGKAKAYILFY 470

Query: 557 VQK 559
           V++
Sbjct: 471 VER 473


>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
          Length = 476

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 186/389 (47%), Gaps = 68/389 (17%)

Query: 200 GLNNLGNTCFMNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCL 247
           GL NLGNTCFMN++LQ+L         F   P   LRN   + R   Y+ +S+    + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSL 174

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
             +      A++ G +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++ 
Sbjct: 175 VEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQG 234

Query: 308 D----------QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCV 351
                      Q       +  CCI         +F GIL+++V C+ CG  S  FDP +
Sbjct: 235 GFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFL 294

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLD+ P+Q  S ++                 + +N  + +L  CL  FT  E L   +
Sbjct: 295 DLSLDI-PSQFRSKRS----------------KNQENGPVCSLRDCLRSFTDLEELDETE 337

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAP 470
            + C +C+ +Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  
Sbjct: 338 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKC 395

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNK 529
           YL                   E       S  ++L AVV H G  + +GHY+ Y     +
Sbjct: 396 YLL------------------EPENSGPESCLYDLAAVVVHHGSGVGSGHYIAYATHEGR 437

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFYVE 466


>gi|410074817|ref|XP_003954991.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
 gi|372461573|emb|CCF55856.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
          Length = 440

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 233/554 (42%), Gaps = 133/554 (24%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H+  F     +   + I      K     ++ +    ++  C  C + +    + C+ 
Sbjct: 4   CEHIVKFSEEKVSSALKMI------KFVVAHSSQKEKWLKLADCSTCHEINQGACFVCLD 57

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQV-YDRDFDAAVVL 141
           C +++C    ++  +A HA +      H I ++ +   +FC  C D + Y+ + D     
Sbjct: 58  CKSINC---WNNKCMATHANELD----HAIGINSNSGLIFCFKCMDYINYESNDD----- 105

Query: 142 AHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGL 201
                             R I +    P +  R                      GL G 
Sbjct: 106 -----------------NRNISF----PTVTNRD---------------------GLHGF 123

Query: 202 NNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCG 261
            N+G+TCFM+S+LQ L H P +    +S  H    C+ +N    C++C LD + +  + G
Sbjct: 124 VNMGSTCFMSSILQVLIHNPFIVQNSMSQSHYSS-CKIRNPNN-CISCALDEIIAESY-G 180

Query: 262 DRMPYSPAKFLYSW-----------WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
           + + Y+  K +  +           W+   N A Y QQDAHEF   +L+ +H   +    
Sbjct: 181 NFVKYNNGKPINQYHDGFISMLNCSWKINDNFAGYSQQDAHEFLQFILNRLHRDYKLTS- 239

Query: 311 KPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTF-DPCVDFSLDLEPNQGSSMKTS 368
              +     C C+ H +F G L+S ++C  C   S T  DP +D SLD++          
Sbjct: 240 -TYTNNTDSCSCLIHSIFQGKLKSSIVCPECHDNSKTVTDPYIDLSLDIKDK-------- 290

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  +TL  CLD F + E L  D  + C  C   Q+ +KQ+
Sbjct: 291 -----------------------ATLYQCLDSFHKKETL-HDYNYHCPNCDTMQDPIKQL 326

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           +I KLP V    +KRFEH +    + K++ +++FP  L+M  Y  +              
Sbjct: 327 TIDKLPPVLVLQLKRFEHLN-NGQNVKLNAFIEFPTYLNMKKYCHT-------------- 371

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVR 547
             +E+N+    S  +EL  V++H G ++ GHY+  L+L SN W+K +D+ +T ++E  V 
Sbjct: 372 --EENNS----SIIYELNGVISHIGTVNEGHYIATLKLDSNNWFKFNDSMVTSISEEEVL 425

Query: 548 AAQGYMMFYVQKML 561
             Q Y++FY  K +
Sbjct: 426 KDQAYLLFYSIKQV 439


>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
           anatinus]
          Length = 494

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 237/565 (41%), Gaps = 129/565 (22%)

Query: 43  DCLHIKPPGGRAAIRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------H 89
           +C H+   G    I  DS++ P        C VC  +  P  + C+ C++V C      H
Sbjct: 2   ECPHL---GSSVCIAPDSAKFPHGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGH 56

Query: 90  VPPHSSHVAI-----HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHT 144
              H     I       T+      H + +D      +C               ++L H 
Sbjct: 57  AKKHYEDAQIPLNNHKKTEKQEKVQHTVCMDCSSYSTYCTGP---------PLLILLLHN 107

Query: 145 TSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNL 204
            +   +S                   LR R L +N ++     +           GL NL
Sbjct: 108 EAPSVTS------------------SLRSRLLKINGSTTALCAT-----------GLRNL 138

Query: 205 GNTCFMNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
           GNTCFMN++LQ+L         F   P   LRN   + R   Y+ +S+    + L  +  
Sbjct: 139 GNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFR 197

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD---- 308
               A++ G +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++      
Sbjct: 198 KTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGV 257

Query: 309 ------QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLD 356
                 Q       +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD
Sbjct: 258 SRSVILQENSGLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLD 317

Query: 357 LEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQ 416
           + P+Q  + ++ + ++   C                +L  CL  FT  E L   + + C 
Sbjct: 318 I-PSQFRNKRSKNQENGPMC----------------SLRDCLRSFTDLEELDETELYMCH 360

Query: 417 QCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSS 475
           +C+ +Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL   
Sbjct: 361 KCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL-- 416

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCD 534
                           E       S  ++L AVV H G  + +GHY  Y     +W+  +
Sbjct: 417 ----------------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFN 460

Query: 535 DAWITEVNENTVRAAQGYMMFYVQK 559
           D+ +T  +E TV  A+ Y++FYV++
Sbjct: 461 DSTVTLTDEETVVKAKAYILFYVER 485


>gi|255713968|ref|XP_002553266.1| KLTH0D12760p [Lachancea thermotolerans]
 gi|238934646|emb|CAR22828.1| KLTH0D12760p [Lachancea thermotolerans CBS 6340]
          Length = 453

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 209/513 (40%), Gaps = 120/513 (23%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           RC  C + +C   + C+ C    C    + SH A+H+ K      H   V+     LFC 
Sbjct: 44  RCSECLEINCGSTFMCLQCGVCGCW---NKSHFALHSKKAG----HIFGVNSSNGLLFCF 96

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
            C D V                       E L     + Y  W     + SL V      
Sbjct: 97  KCGDYV--------------------GGNETLINSTLVKY--WDDISVKSSLPVAKGRD- 133

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH-NRYYCQSKNGV 243
                       GL GL N+G+TCFM+S++Q L H P +    ++  H +R   Q  +  
Sbjct: 134 ------------GLCGLVNMGSTCFMSSIIQTLVHNPYVLKQCMNQNHYSRCDIQDSSS- 180

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKF----------LYSWWRHASNLASYEQQDAHE- 292
             C +C LD +    +     P S A F          L   W+   NLA Y QQDAHE 
Sbjct: 181 --CFSCALDQIVMNFY----GPTSDATFTSQQRGFVDLLLCSWKTNKNLAGYSQQDAHEF 234

Query: 293 --FFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC-GFTSTTFDP 349
             FF++ L   H +V +   K  +      CI H  F G LRS ++C  C   ++ TFDP
Sbjct: 235 LQFFLNQLHADHVRVAQTNVKAENCN----CILHTAFQGSLRSSILCTDCQDGSNITFDP 290

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
            +D SLD++                                 STL+ CL  F + ERL +
Sbjct: 291 MMDLSLDIKNK-------------------------------STLVECLQSFHKGERL-T 318

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMA 469
           D    C  C   Q  +KQM+I KLP V    +KRFEH  +   + K++  + +P  L+MA
Sbjct: 319 DFNHHCSSCGSVQNPIKQMTIAKLPPVLVLQLKRFEH-LMNGNNVKLNGEITYPAYLNMA 377

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL-SN 528
           P+   S  RS                   P   +EL AV++  G ++ GHY    ++   
Sbjct: 378 PFCHHSEARSV------------------PDMVYELVAVISQEGSVNQGHYTCMCKVPGG 419

Query: 529 KWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           +W++ +D  I  + E  V   Q Y++FYV + +
Sbjct: 420 QWFRFNDTMIVSITEEDVLRQQAYLLFYVIRQI 452


>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
          Length = 472

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 199/418 (47%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N++     +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 84  RKRKLLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 143

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 144 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 202

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 203 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSALSASNKCCINGASTVV 262

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ +              
Sbjct: 263 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKN-------------- 307

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
              +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 308 --QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 365

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL              P +    + L      
Sbjct: 366 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLLE------------PENSGPEHCL------ 405

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+TV  A+ Y++FYV++
Sbjct: 406 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 463


>gi|254577285|ref|XP_002494629.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
 gi|238937518|emb|CAR25696.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
          Length = 465

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 222/522 (42%), Gaps = 119/522 (22%)

Query: 57  RRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDV 116
           R   + V +C  C + +    + C+ C    C    + +H   H+ K      H   ++ 
Sbjct: 37  REKYTHVMKCSDCHEINAGSNFMCLQCGFCGC---WNGNHFGQHSKKVG----HVFGINS 89

Query: 117 DRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSL 176
               LFC  C D +   +  AA +L        +   +++  + +I      P L  R  
Sbjct: 90  SNGLLFCFKCGDYIGSNELIAASML--------NKYWDDVVTKTQI------PKLERRD- 134

Query: 177 MVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYY 236
                               GL+GL N+G+TCFM+S++Q L H P    + ++  H++  
Sbjct: 135 --------------------GLQGLLNMGSTCFMSSIVQCLIHNPYFFQFSINQLHSQ-R 173

Query: 237 CQSKNGVRLCLACDLDTMFSAIFC-------------GDRMPYSPAKFL---YSWWRHAS 280
           C  ++ +  C++C LD M    +                R     A F+    S W+   
Sbjct: 174 CPLQDPLS-CISCALDRMVWEFYGHPELIKNGEDDSNNSRTSDEYAGFIGLFVSSWKINE 232

Query: 281 NLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD--C-CIAHRVFSGILRSDVMC 337
           NLA Y QQDAHE++  +L+ +H       +K   + N    C CIAH  F G L+S ++C
Sbjct: 233 NLAGYFQQDAHEYWQFLLNQLHNDYMVSHNKSPDETNFAELCDCIAHSTFQGSLKSSIVC 292

Query: 338 MACGFTS-TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
             C   S TT DP +D SLD++                                 S L  
Sbjct: 293 PECKMDSKTTKDPFMDLSLDIKDK-------------------------------SNLYE 321

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           CLD F + E+L  D  + C +C   Q ++K++ I KLP V    +KRFEH  +   S K+
Sbjct: 322 CLDSFHKMEQL-HDFNYHCDRCNTTQNAIKRLIIHKLPAVLVLQLKRFEH-HLNGNSAKL 379

Query: 457 DRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD 516
           +  ++FPL L+M  Y                 DGD+      P   FEL  ++ H G ++
Sbjct: 380 NDIVEFPLFLNMRNYC----------------DGDDV-----PDIIFELIGIIAHRGTVN 418

Query: 517 AGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            GHY+ + +++   W+K +D+ ++ + E  +   Q Y++FYV
Sbjct: 419 EGHYIAFTKVTTGHWFKFNDSMVSSITEEELLQEQAYLLFYV 460


>gi|344302467|gb|EGW32741.1| hypothetical protein SPAPADRAFT_149886 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 547

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 180/378 (47%), Gaps = 64/378 (16%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC-----QSKNGVRL----- 245
             L+G  NLG TCFM+S+LQ L H P ++  F ++  + + C     Q  NG  +     
Sbjct: 214 NALKGFVNLGATCFMSSILQTLIHNPIVKYQFFNNDLHYFNCERNRLQYMNGGVIEENNA 273

Query: 246 CLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
           C+ C +D++F   F       +     L + W    +LA +++QDAHEF+  +L+  H  
Sbjct: 274 CITCSVDSIFQYFFSNSSTEGFGMTNLLTTSWYKKKSLAGFQEQDAHEFWQFLLNEFHSD 333

Query: 305 VEKDQHKPRS---QGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
           +++   +P       N  C CI H  FS  L+S + C +C   + T DP +D SL+++ +
Sbjct: 334 LQRVMGRPSLPALNDNNQCKCITHTTFSFELQSSIKCASCDQITETIDPMIDLSLEIKNS 393

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
           Q   +                            +  CLD FT  E+L  D  + C  C  
Sbjct: 394 QNKQID---------------------------IYDCLDLFTSEEKL--DILYTCNFCGD 424

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
           + +  K++ ++ +P V    +KRFEH +    + K++  +  PL LD+  Y         
Sbjct: 425 KTKPTKRLRLKSIPPVLSIQLKRFEHKN--DSTSKIETPVSIPLFLDLTKYC-------- 474

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN-KWYKCDDAWIT 539
                   DG+ ++++ + +  FELFAVV H G ++ GHY+ Y++  N +W+  DD+ I+
Sbjct: 475 --------DGENTDSI-DGNKVFELFAVVCHIGSVNTGHYIVYIKDGNGRWFMYDDSVIS 525

Query: 540 EVNENTVRAAQGYMMFYV 557
            V++  V     Y+++Y+
Sbjct: 526 LVSQQDVTNKNAYLLYYI 543


>gi|363754463|ref|XP_003647447.1| hypothetical protein Ecym_6248 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891084|gb|AET40630.1| hypothetical protein Ecym_6248 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 466

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 226/544 (41%), Gaps = 124/544 (22%)

Query: 40  AIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAI 99
            +++C+ ++        +    +  RC  C   +C   + C+ C  V C    H  H   
Sbjct: 19  VVKECITVRYLIRNCDAKDRYLKAMRCSECFQINCGNTFMCLQCGFVGCWNENHFLH--- 75

Query: 100 HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKR 159
           H+ K      H   V+     LFC  C D + D +                         
Sbjct: 76  HSKKVG----HIFGVNATNGLLFCFRCCDYIGDNEL------------------------ 107

Query: 160 RRIDYRP--WSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL 217
            R+D  P  W   L   S+              + D   GL GL N+G+TCFM+SV+Q L
Sbjct: 108 VRMDIMPKYWDEVLLRSSI-------------PSVDGKDGLLGLVNMGSTCFMSSVIQTL 154

Query: 218 FHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAK------- 270
            H P +  + L   H +  C  ++ +  C++C +D + + ++ G   P +  K       
Sbjct: 155 VHIPHVLQHVLKQTH-QSTCDIQDSIA-CVSCAVDEIVANLY-GYPKPNAVTKSSVGQYS 211

Query: 271 ---------------FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
                           L   W+   NLA Y QQDAHEF+  +L+ +H    +  HKP S 
Sbjct: 212 HISSTFSRQQKGFIDLLTCSWKINKNLAGYTQQDAHEFWQFLLNQLHSDHVR-AHKPSSN 270

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
            +   CI H +F G L S++ C  C   S TT DP +D SL ++                
Sbjct: 271 NSNCECILHLLFQGYLESNIACSECHTNSKTTVDPIMDLSLGIQNK-------------- 316

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                            STL  CL+ F + E L +D  + C++C+  +  ++Q++  KLP
Sbjct: 317 -----------------STLHECLNSFHKREPL-TDFNYCCKKCKSTKNPIRQLTTAKLP 358

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRFEH  +   S K++ Y+ FPL L+M  Y               P D     
Sbjct: 359 PVLMLQLKRFEH-LMNGTSVKINDYISFPLHLNMKDYCK-------------PVDCLHP- 403

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYM 553
               P+  ++L A+++H G +  GHY T  R++ + W K +D+ +T ++E  +   Q Y+
Sbjct: 404 ---VPNMMYKLSAIISHHGTVHQGHYTTICRINGDIWAKFNDSMVTVISEEDMLKEQAYL 460

Query: 554 MFYV 557
           ++YV
Sbjct: 461 LYYV 464


>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
           lupus familiaris]
          Length = 476

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 199/418 (47%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N++     +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 88  RKRKLLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 147

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 148 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 206

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 207 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 266

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ +              
Sbjct: 267 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKN-------------- 311

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
              +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 312 --QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 369

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL              P +    + L      
Sbjct: 370 FHWTAY--LRNKVDTYVEFPLRGLDMKCYL------------LEPENSGPEHCL------ 409

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E+TV  A+ Y++FYV++
Sbjct: 410 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 467


>gi|196000410|ref|XP_002110073.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
 gi|190588197|gb|EDV28239.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
          Length = 870

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 173/360 (48%), Gaps = 60/360 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++NSVLQ L +TPPL NY L+++H +  C+    +  C+ C+L ++     
Sbjct: 106 GLVNLGNTCYLNSVLQCLCYTPPLANYALAEQHKKD-CRK---IGFCVLCELQSLMVRCL 161

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
             +     P   +      AS++    Q+DAHEF   ++DGI         K   Q + D
Sbjct: 162 KSNGSSVKPWPIVNKLKNIASHIQFGRQEDAHEFLRYLVDGIQSSCLAAYPKNLDQYSKD 221

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + +R+F G LRS V C  C + S  +DP +D SLD+                      
Sbjct: 222 TTMIYRIFGGYLRSLVQCAQCKYKSIKYDPMLDLSLDI---------------------- 259

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      ++TL   L +F  PE L     + C +C+V+ +++K+ +I + P+V   
Sbjct: 260 ---------ADLNTLSAMLRKFIEPEILSGRDMYTCSKCKVKVKAMKKFTIHRAPVVLTI 310

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            IKRF   S+     K  R ++F  +LD+ PY++     S+ G+                
Sbjct: 311 PIKRFNKFSL--FGGKNSRKIKFTETLDLRPYMT-----SKTGSPLL------------- 350

Query: 500 SSEFELFAVVTHT-GKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+ V+ H+ G  ++GHY  Y++ S N+WY  +D+ +T+ N N V   + Y++FY+
Sbjct: 351 ---YNLYGVLVHSGGSCNSGHYYCYVKSSNNQWYCMNDSHVTKSNINAVLLQEAYILFYI 407


>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
          Length = 449

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 197/418 (47%), Gaps = 68/418 (16%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N++     +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 61  RKRKLLENSSLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 120

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 121 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 179

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 180 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSCSPILQENSTLSASNKCCINGASTVV 239

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ + ++   C       
Sbjct: 240 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKNQENGPVC------- 291

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                    +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 292 ---------SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 342

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL              P +    N L      
Sbjct: 343 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLLE------------PENSGPENCL------ 382

Query: 503 FELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++L AVV H G  + +GHY  Y     +W+  +D+ +T   E+TV  A+ Y++FY ++
Sbjct: 383 YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEDTVVKAKAYILFYAER 440


>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
          Length = 476

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 185/389 (47%), Gaps = 68/389 (17%)

Query: 200 GLNNLGNTCFMNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCL 247
           GL NLGNTCFMN++LQ+L         F   P   LRN   + R   Y+ +S+    + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSL 174

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
             +      A++ G +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++ 
Sbjct: 175 VEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQG 234

Query: 308 D----------QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCV 351
                      Q       +  CCI         +F GIL+++V C+ CG  S  FDP +
Sbjct: 235 GFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFL 294

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLD+ P+Q  S ++                 + +N  + +L  CL  FT  E L   +
Sbjct: 295 DLSLDI-PSQFRSKRS----------------KNQENGPVCSLRDCLRSFTDLEELDETE 337

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAP 470
            + C +C+ +Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  
Sbjct: 338 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKC 395

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNK 529
           YL                   E       S  ++L AVV H G  + +GHY  Y     +
Sbjct: 396 YLL------------------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGR 437

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
           W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFYVE 466


>gi|195022094|ref|XP_001985517.1| GH17103 [Drosophila grimshawi]
 gi|193898999|gb|EDV97865.1| GH17103 [Drosophila grimshawi]
          Length = 241

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 137/251 (54%), Gaps = 50/251 (19%)

Query: 318 GDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
           G C CI  ++F+G+L+SDV+C AC   STTFDP  D SLDL                   
Sbjct: 37  GQCNCIIDQIFTGMLQSDVVCQACNGVSTTFDPFWDISLDLG------------------ 78

Query: 377 NCEADGMNSSQNCGIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                   ++ + G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP
Sbjct: 79  -------ETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLP 131

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V  FH+KRFEHS++  + RK+  ++QFP+  DM P++S    ++ +G+           
Sbjct: 132 SVVSFHLKRFEHSAL--IDRKISSFIQFPVEFDMTPFMSEK--KNAYGD----------- 176

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYM 553
                   F L+AVV H G +D GHY  ++R   + W KCDD  IT  + N V  ++GY+
Sbjct: 177 ------FRFSLYAVVNHVGTIDTGHYTAFVRHQKDTWVKCDDHVITMASLNQVLESEGYL 230

Query: 554 MFYVQKMLYYK 564
           +FY + +L Y+
Sbjct: 231 LFYHKNILEYE 241


>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
           gorilla]
          Length = 724

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 231/542 (42%), Gaps = 120/542 (22%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 254 IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 311

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 312 NHKKSEKQDKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 371

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 372 RHRKRKLLE----NSTLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAIL 416

Query: 215 QALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYS 274
           Q+L          L +   +  C                   A++ G +  +SP    Y 
Sbjct: 417 QSLRS--------LVEEFRKTLC-------------------ALWQGSQTAFSPESLFYV 449

Query: 275 WWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI-- 322
            W+   N   Y+QQDAHEF   +LD +H +++            Q       +  CCI  
Sbjct: 450 VWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCING 509

Query: 323 ----AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
                  +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++           
Sbjct: 510 ASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS----------- 557

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C
Sbjct: 558 -----KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLC 612

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            H+KRF  ++   +  KVD Y++FPL  LDM  YL                   E     
Sbjct: 613 LHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSG 652

Query: 498 EPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FY
Sbjct: 653 PESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 712

Query: 557 VQ 558
           V+
Sbjct: 713 VE 714


>gi|385303854|gb|EIF47904.1| ubiquitin carboxyl-terminal hydrolase [Dekkera bruxellensis
           AWRI1499]
          Length = 375

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 182/382 (47%), Gaps = 74/382 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           RGL+G  N+G+TCFM+S+LQA+ H P +R+Y+LS  H           + C++C +  +F
Sbjct: 43  RGLKGFINMGSTCFMSSILQAIVHNPFIRDYYLSGSH----LDCPRDPKDCISCCVGEIF 98

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHA--SNLASYEQQDAH-EFFISMLDGIHEKVEKDQH-- 310
              +   ++P      +  +  H    NL        H  F+  ++  +H+   K  H  
Sbjct: 99  KDFYXLYKVPLX-MDLVQCYQLHGKLENLLLVILNKMHMNFWQFLIHQLHKNDTKRLHDR 157

Query: 311 --KPRSQGNGD-----------C-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLD 356
              P    +GD           C CI HR F+G L+S + C  CG    T DP +D SL+
Sbjct: 158 ESTPALDSDGDKKDLASNPLFKCDCITHRTFAGELQSTLTCADCGNKHVTXDPMLDLSLE 217

Query: 357 LEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQ 416
           +                             +N  + TL  CL +FT+PE+L  D  F C 
Sbjct: 218 IR---------------------------ERNESLKTLDXCLQKFTKPEKL--DILFSCP 248

Query: 417 QCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSI 476
           +C  +    KQ+ IRKLP   C  +KRFEH +V   S K++ ++  PL LDM+ Y     
Sbjct: 249 RCAKKTGVTKQLQIRKLPPTLCIQLKRFEHVNV---STKLEAHVDIPLILDMSKY----- 300

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDD 535
             +  G R    +GD  + L      +EL+AVV H G ++ GHY++ ++     W+K DD
Sbjct: 301 --TLDGKR----NGDSGSDL------YELYAVVYHIGNVNTGHYISLVKDRDGMWFKFDD 348

Query: 536 AWITEVNENTVRAAQGYMMFYV 557
           + +  V+E  V A+Q Y++FY+
Sbjct: 349 SHVVRVSEKDVLASQAYLLFYI 370


>gi|297272148|ref|XP_001100993.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Macaca
           mulatta]
          Length = 660

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 142/285 (49%), Gaps = 27/285 (9%)

Query: 18  IFPQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           + P  C HL  F   N  +  RAI  C       G A  R+  ++   C VCG     RL
Sbjct: 184 VAPPGCSHLGSFKVDNWKQNLRAIYQCFVW---SGTAEARKRKAKSCICHVCG-VHLNRL 239

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDA 137
           ++C+ C    C    H     IH    S    H +A+D+    ++C  C+D +YD+D + 
Sbjct: 240 HSCLYCVFFGCFTKKH-----IHEHAKSK--RHNLAIDLMYGGIYCFLCQDYIYDKDMEI 292

Query: 138 AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                   +       E         +  W P  RE  L+ +N  P     +SN  +  G
Sbjct: 293 IAKEEQRKAWKMQGAGEK--------FSTWEPTKRELELLKHN--PKRRKITSNCTI--G 340

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSDRH R   QS +    CL C++ ++F  
Sbjct: 341 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRH-RCEMQSPSS---CLVCEMSSLFQE 396

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
            + G R P+ P K L+  W HA +LA YEQQDAHEF I+ LD +H
Sbjct: 397 FYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLH 441



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 113/166 (68%), Gaps = 9/166 (5%)

Query: 400 RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRY 459
           RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K+ RK+  Y
Sbjct: 503 RFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA--KLRRKITTY 560

Query: 460 LQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGH 519
           + FPL LDM P+++SS   SR   ++       +++LN   +++ LFAVV H G L++GH
Sbjct: 561 VSFPLELDMTPFMASSK-ESRMNGQY----QQPTDSLNN-DNKYSLFAVVNHQGTLESGH 614

Query: 520 YVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           Y +++R   ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 615 YTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 660


>gi|403216854|emb|CCK71350.1| hypothetical protein KNAG_0G02930 [Kazachstania naganishii CBS
           8797]
          Length = 459

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 188/399 (47%), Gaps = 71/399 (17%)

Query: 183 PIDSMSSSNGDLPRGLR-----GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC 237
           P DS  S    LP  LR     GL NLG+TCFM+S+LQ+L H   ++ +FL+  H R  C
Sbjct: 116 PWDSAMSKQVSLPTSLRRDGLYGLLNLGSTCFMSSILQSLIHNTYIQYWFLNSGHAR-RC 174

Query: 238 QSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSW---WRHASNLASYEQQDAHEFF 294
             ++    C++C LD + S  +         A FL      W+   N A Y QQDAHEF 
Sbjct: 175 ALRDPSS-CISCALDRIISECYGSLSERNDHAGFLSLLTCSWKINQNFAGYSQQDAHEFL 233

Query: 295 ISMLDGIH-----EKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTS-TTF 347
             +L+ +H     E+   +  + RS  +  C CI H  F G LRS ++C  C   S T  
Sbjct: 234 QFLLNQLHCDYKRERQVDEDKEVRSSSSQLCHCIVHSSFQGTLRSSIVCPECQDDSKTML 293

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
           DP +D SLD++                               G  TL  CLD F R E+L
Sbjct: 294 DPFLDLSLDIK-------------------------------GQRTLYDCLDSFHRREQL 322

Query: 408 GSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLD 467
             D  + C +CQ  ++ +KQ++I +L       +KRFEH +  + + K++  +QFPL LD
Sbjct: 323 -HDFDYHCPRCQTSRDPIKQLTIERLAPTLVLQLKRFEHLTSGQ-NVKLNDPVQFPLHLD 380

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL- 526
           M+ Y +                G E  T    S  + L  VV+H+G ++ GHY   L+L 
Sbjct: 381 MSRYCT----------------GGEPTT----SIVYRLSGVVSHSGTVNEGHYTAVLQLN 420

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKA 565
           S +W+K +D+ I+ V+   V   Q Y++ Y  + +   A
Sbjct: 421 SGEWFKFNDSMISVVSAEDVLREQAYLLLYTVEQVAATA 459


>gi|63102020|gb|AAH95742.1| LOC553470 protein, partial [Danio rerio]
          Length = 265

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 149/295 (50%), Gaps = 38/295 (12%)

Query: 20  PQPCPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYA 79
           P  C H+  F   N  +  R I  C       G A  R+  ++   C +CG +   RL++
Sbjct: 3   PAGCSHVNGFKVDNWKQNLRVIYQCF---VWSGSAETRKRKAKSCICHMCG-AHLNRLHS 58

Query: 80  CMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV 139
           C+ C    C    H     IH    +    H +A+D+    ++C  C+D +YD+D +   
Sbjct: 59  CLHCVFFGCFSKKH-----IHEHAKNK--RHNLAIDLLYGGIYCFVCQDYIYDKDME--- 108

Query: 140 VLAHTTSIIQSSKPENLRKRRRID-----YRPWSPDLRERSLMVNNASPIDSMSSSNGDL 194
                    Q +K E  RK  ++      Y  W P  RE  L+ +N  P     ++N  +
Sbjct: 109 ---------QIAKEEQ-RKAWKLQGIGEKYSMWEPTKRELELLRHN--PKRRKITANCTI 156

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
             GLRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++  +
Sbjct: 157 --GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSNS--CLVCEMSQL 209

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
           F   + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   +K +
Sbjct: 210 FQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKKKK 264


>gi|356498762|ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
           max]
          Length = 879

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 170/363 (46%), Gaps = 64/363 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL  Y  S +H +  C        C  C +    S   
Sbjct: 96  GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKH-KTSCHVAG---FCALCAIQNHVSRAL 151

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  SP   + +    + N  +  Q+DAHE+ +++L+ +H+          S G  +
Sbjct: 152 QSTGRILSPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCLPSGIPSESPGAYE 211

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
               H++F G LRS V C  C + S  FDP +D SL++                     +
Sbjct: 212 KSFVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEI--------------------FK 251

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           AD           +L   L  FT  E L G ++++ CQ+C+ +  +LKQ++I K P V  
Sbjct: 252 AD-----------SLQKALSNFTAAEWLDGGEKEYHCQRCKQKVRALKQLTIHKAPYVLT 300

Query: 439 FHIKRFE-HSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            H+KRF  H   +K+ +K+    QF  +LD+ P++S S            +DGD      
Sbjct: 301 IHLKRFHAHDPGQKIKKKI----QFGCALDLKPFVSGS------------YDGD------ 338

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMF 555
               ++ L+ V+ H G    +GHY  Y+R SN  WY  DD  ++ V+E  V   Q YM+F
Sbjct: 339 ---VKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLF 395

Query: 556 YVQ 558
           YV+
Sbjct: 396 YVR 398


>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
            carolinensis]
          Length = 1066

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 186/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +AS I +++   G +   L GL NLGNTC+MNS+LQ L + P L +YF     NR Y Q 
Sbjct: 706  SASQIRNLNPVFGGMGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF-----NRNYYQV 760

Query: 240  KN------GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
                    G +  +A +   +  A++ G     SP  F  +  +     A Y QQD+ E 
Sbjct: 761  DINRSNFLGHKGEVAEEFGIIMKALWAGQYRYISPKDFKMTIGKINDQFAGYSQQDSQEL 820

Query: 294  FISMLDGIHEKVEKDQHKPR--SQGNGDC------------------CIAHRVFSGILRS 333
             + ++D +HE + K  ++ R   + N D                    I   +F G  +S
Sbjct: 821  LLFLMDDLHEDLNKADNRKRYKEENNDDLDDPKAADLAWHKHKQLNESIIVALFQGQFKS 880

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 881  TVQCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---T 911

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  C   F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 912  LQECFRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 969

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL SLD++ Y+                 G +SN     S  + LFAV  H 
Sbjct: 970  QKLQTSVDFPLESLDVSQYVI----------------GPKSN-----SKRYNLFAVSNHY 1008

Query: 513  GKLDAGHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y + + K  WYK DD  ++E++ ++V+++  Y++FY 
Sbjct: 1009 GGLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFYT 1055


>gi|410912832|ref|XP_003969893.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Takifugu
            rubripes]
          Length = 1082

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 185/405 (45%), Gaps = 84/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +A+ I S++ S G L   L GL NLGNTC+MNSVLQ L + P L  YF    +N YY   
Sbjct: 731  SAAKIRSLNPSFGGLGASLTGLRNLGNTCYMNSVLQCLCNAPALTEYF----NNNYYMDD 786

Query: 240  KN-----GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             N     G +  +A +   +  A++ G     SP  F  +  +     + YEQQD+ E  
Sbjct: 787  INRSNILGHKGDVAEEFGVIMKALWSGLYKCISPRDFKITIGKINEQFSGYEQQDSQELL 846

Query: 295  ISMLDGIHEKVEKDQHKPR----------SQGNGDCC----------IAHRVFSGILRSD 334
            + ++DG+HE + K  ++ R           Q   D            I   +F G  +S 
Sbjct: 847  LFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADVAWRKHKLLNESIIVALFQGQFKST 906

Query: 335  VMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
            V C+ C   S TF+  +  SL L                           S+  C   +L
Sbjct: 907  VQCLTCHRKSRTFETFMYLSLPLA--------------------------STSKC---SL 937

Query: 395  MGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
              CL  F++ E+L  + K FC+ C+  ++S K++ I K+P +   H+KRF +    +  +
Sbjct: 938  QDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEG--RWKQ 995

Query: 455  KVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
            K+   + FPL SLD+A Y+         G +             +    + L+AV  H G
Sbjct: 996  KLQTSVDFPLDSLDLAQYV--------IGPK-------------QSLKRYSLYAVSNHYG 1034

Query: 514  KLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             LD GHY  Y +  L  +WYK DD  +++++ ++V+++  Y++FY
Sbjct: 1035 GLDGGHYTAYCKSALKQRWYKFDDHEVSDISTSSVKSSAAYILFY 1079


>gi|225560891|gb|EEH09172.1| ubiquitin carboxyl-terminal hydrolase [Ajellomyces capsulatus
           G186AR]
          Length = 248

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/282 (35%), Positives = 144/282 (51%), Gaps = 41/282 (14%)

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMAC 340
           L+ Y+QQDAHEF+  ++D +H       H      N  C C  H  F G LRS V C  C
Sbjct: 2   LSGYQQQDAHEFYQFLVDKLHAGA----HDHVEDHNKTCHCFFHNAFYGKLRSSVTCDKC 57

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
           G  + T D  +D SLD++  +                 +   +   ++    TL GCL  
Sbjct: 58  GNVTQTEDQMIDLSLDVQVQK-----------------KKRALGGGESTAAPTLDGCLQS 100

Query: 401 FTRPERLGSDQKFFCQQC-QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRY 459
           FT PE+L +D  + C  C   +Q++ KQ+ IRKLP++ C  +KRFEH+    +S KV+  
Sbjct: 101 FTSPEKLMAD-AYNCSGCGSTQQKATKQLRIRKLPVILCMQLKRFEHT--LSVSEKVEGK 157

Query: 460 LQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGH 519
           + FPLS++M PY +    R+ + N     +G  SN L      ++L + V H GKLDAGH
Sbjct: 158 IDFPLSINMLPYTT----RAHYKN-----EGGHSNFL------YDLSSAVVHKGKLDAGH 202

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           Y  Y R   +WY  +D  +T VNE  V AA  Y++FY    L
Sbjct: 203 YYVYCRQGEQWYLFNDDQVTVVNEAEVLAADAYLLFYTLHAL 244


>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
 gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
          Length = 477

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 236/532 (44%), Gaps = 74/532 (13%)

Query: 41  IQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIH 100
           I++ + + P    A ++  +  +  C  C     P  + C++C  +SC       +V  H
Sbjct: 6   IEESVKLTP----ADLKNSNCSLWTCEECETKESP--WICLSCGNISC-----GRYVKGH 54

Query: 101 ATK-TSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKR 159
           A K       H + +D   A ++C +C + + +   D  +        I+     NL + 
Sbjct: 55  AKKHYEDLNQHCLCLDPAFA-VYCYSCDEYIINDSEDNKI------QKIRDQLQSNLERL 107

Query: 160 RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
            +ID + ++ ++    ++ +    I S S+        + GL NLGNTC++N++LQ+L +
Sbjct: 108 NKIDAKRYAKNISSLKIVPSVLFIIVSTSAYQ------ILGLKNLGNTCYLNAILQSLSN 161

Query: 220 TPPLRNYF-----LSDRHNRYYCQSKN----GVRLCLACDLDTMFSAIF-CGDRMPYSPA 269
             P   YF     L+D   R    + N    G  +C+  +L  +   +        YSP 
Sbjct: 162 IDPFCRYFKTFRSLTDSDPRKEKHAHNTRAQGDNVCIVDELRKVLDGLGEISSSSYYSPN 221

Query: 270 KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSG 329
            FL +  +       Y QQDAHEF   +LD +H ++ + +            I   +F G
Sbjct: 222 SFLTAICKLIPRFRGYHQQDAHEFMRYLLDRLHTELGRMRAPYYGNKQVSNTIVTTLFRG 281

Query: 330 ILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNC 389
            L ++V C+ C   S   D  +D SLD+ P++  S +  S   N              + 
Sbjct: 282 SLLNEVNCLVCDINSRKTDSFLDLSLDI-PSEFISRRNKSIGDN--------------DI 326

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
            I  L  CL  FT  E+L   + ++C  C  +Q S KQ+ I+ LP V C H+KRF  SS 
Sbjct: 327 SICKLTDCLSSFTELEKLEDSELYYCSSCTKKQLSTKQLRIKTLPRVLCLHLKRFRWSSC 386

Query: 450 RKMSRKVDRYLQFP-LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAV 508
             + +K+D Y++FP + LDM PYL+   L+     R                S ++L AV
Sbjct: 387 --IRKKLDIYVEFPMIGLDMKPYLT---LKQTSNGR----------------SMYDLIAV 425

Query: 509 VTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           V H G    +GHY  Y    + WY  +D+ ++   E  V   + Y++FYVQ+
Sbjct: 426 VEHHGSGYGSGHYTAY-AYKDGWYHFNDSTVSVAMEEHVIKCKAYILFYVQR 476


>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
          Length = 537

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 208/470 (44%), Gaps = 93/470 (19%)

Query: 110 HEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRP 166
           H + +D      +C  C D V +      V  V  H  ++  S+   +  RKR+ ++   
Sbjct: 130 HTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRYRKRKLLE--- 186

Query: 167 WSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNY 226
            +  L  + L VN ++     +           GL NLGNTCFMN++LQ+L         
Sbjct: 187 -NSSLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQSL--------- 225

Query: 227 FLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYE 286
                               L  +      A++ G +  +SP    Y  W+   N   Y+
Sbjct: 226 ------------------RSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQ 267

Query: 287 QQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHRVFSGI 330
           QQDAHEF   +LD +H +++            Q       +  CCI         +F GI
Sbjct: 268 QQDAHEFMRYLLDHLHLELQGGFNGVSRSAMLQENSSLSASNKCCINGASTVVTAIFGGI 327

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
           L+++V C+ CG  S  FDP +D SLD+ P+Q  S ++ + ++   C+  A          
Sbjct: 328 LQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRSKNQENGPVCSLRAQ--------- 377

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
           I+ +  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF  ++  
Sbjct: 378 ITLVSDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY- 436

Query: 451 KMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            +  KVD Y++FPL  LDM  YL                   E       S  ++L AVV
Sbjct: 437 -LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYDLAAVV 477

Query: 510 THTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
            H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 478 VHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVE 527


>gi|356564905|ref|XP_003550687.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
           max]
          Length = 903

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 171/363 (47%), Gaps = 64/363 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL  Y  S +H +  C        C  C +    S   
Sbjct: 99  GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKH-KTSCHVAG---FCALCAIQNHVSRAL 154

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P   + +    + N  +  Q+DAHE+ +++L+ +H+          S G  +
Sbjct: 155 QSTGRILAPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCLPSGIPSESPGAYE 214

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
               H++F G LRS V C  C + S  FDP +D SL++                     +
Sbjct: 215 KSFVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEI--------------------FK 254

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           AD           +L   L  FT  E L G ++++ CQ+C+ + ++LKQ++I K P V  
Sbjct: 255 AD-----------SLQKALSNFTAAEWLDGGEKEYHCQRCKQKVKALKQLTIHKAPYVLT 303

Query: 439 FHIKRFE-HSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            H+KRF  H + +K+ +KV    QF  +LD+ P++S S             DGD      
Sbjct: 304 IHLKRFHAHDTGQKIKKKV----QFGCALDLKPFVSGS------------NDGD------ 341

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMF 555
               ++ L+ V+ H G    +GHY  Y+R SN  WY  DD  ++ V+E  V   Q YM+F
Sbjct: 342 ---VKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLF 398

Query: 556 YVQ 558
           YV+
Sbjct: 399 YVR 401


>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
          Length = 521

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 235/554 (42%), Gaps = 105/554 (18%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT 102
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     +  T
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLT 69

Query: 103 -----KTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSSKPEN 155
                +      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 156 LRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQ 215
             K+R++     +  L  + L VN ++     +           GL NLGNTCFMN++LQ
Sbjct: 130 RHKKRKLLE---NSTLNSKLLKVNGSTTAICAT-----------GLRNLGNTCFMNAILQ 175

Query: 216 AL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR 263
           +L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G +
Sbjct: 176 SLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQ 234

Query: 264 MPYSPAKFLYSWWRHASNLASYEQQDAHEF--------FISMLDGIHEKVEKDQHKPRSQ 315
             +SP    Y  W+   N   Y+QQDAHEF         +     +       Q   R  
Sbjct: 235 TAFSPESLFYVVWKIMPNFRGYQQQDAHEFNALPFGPPTLGNFRAVSTVFPAQQFCRRIL 294

Query: 316 ---------GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
                     NG   +   +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S +
Sbjct: 295 LCLQVNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKR 353

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
           +                 + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K
Sbjct: 354 S----------------KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 397

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL             
Sbjct: 398 KFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKWYLL------------ 443

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                 E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E 
Sbjct: 444 ------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEE 497

Query: 545 TVRAAQGYMMFYVQ 558
           TV  A+ Y++FYV+
Sbjct: 498 TVVKAKAYILFYVE 511


>gi|365986617|ref|XP_003670140.1| hypothetical protein NDAI_0E00810 [Naumovozyma dairenensis CBS 421]
 gi|343768910|emb|CCD24897.1| hypothetical protein NDAI_0E00810 [Naumovozyma dairenensis CBS 421]
          Length = 493

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 227/529 (42%), Gaps = 123/529 (23%)

Query: 65  RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCC 124
           RC  C + +    + C+ C    C    ++S  A H+ +      H  +++     LFC 
Sbjct: 45  RCSTCKEINAGSTFMCLQCDFSGC---WNNSDFANHSKQMG----HIFSINSSNGLLFCF 97

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPI 184
            C D + D +     +L      I  SK  ++  + R D                     
Sbjct: 98  KCVDYIGDVEQINYSMLNKFWDDI--SKKTHITSQERKD--------------------- 134

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
                       GL GL N+G+TCFM+S+LQ L H P + NY +   H    CQSKN + 
Sbjct: 135 ------------GLFGLVNMGSTCFMSSILQTLIHNPYVVNYSMCQTHYNM-CQSKNPLS 181

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPA-----KFLYSWWRHASNLASYEQQDAHEFFISMLD 299
            C +C LD + +  +  +    + +       L S  +   N A Y QQDAHEF   +L+
Sbjct: 182 -CTSCALDLIITEFYATESKGNNSSHTGFISLLNSLLQVNENFAGYSQQDAHEFLQFILN 240

Query: 300 GIHEKVEKDQHKPRSQGNGDC------------------------------CIAHRVFSG 329
            IH   + +  +  + GN                                 C++H  F G
Sbjct: 241 QIHNDYKLNSMEDVNSGNTTAIAMKTLPGTQNSNNNNNNTNHIHGNDVSCKCLSHSNFQG 300

Query: 330 ILRSDVMCMACGFTS-TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
            L+S ++C  C   S TT DP +D SLD++            KSN               
Sbjct: 301 SLKSSILCPQCNNDSKTTIDPFMDLSLDVKD-----------KSN--------------- 334

Query: 389 CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS 448
                L  CLD F + E+L  D  F C +C   Q+ +KQ+++ KL  +  F +KRFEH  
Sbjct: 335 -----LYQCLDSFHKLEKL-HDFNFHCSECNSTQDPIKQLTLNKLSPLLVFQLKRFEH-L 387

Query: 449 VRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAV 508
           +   + K++ ++++PL L+M  Y  SS   +           +ESN+ N P   +EL ++
Sbjct: 388 LNGTTVKINDFIEYPLYLNMKTYCQSSNNDTE---------EEESNSENVPDMIYELTSI 438

Query: 509 VTHTGKLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
           ++H G ++ GHY+  +++++ +W+K +D+ ++ + E      Q Y++FY
Sbjct: 439 ISHKGTVNEGHYIVVVKVNDGQWFKFNDSMVSAITEEEALKQQAYLLFY 487


>gi|156842109|ref|XP_001644424.1| hypothetical protein Kpol_1064p48 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115066|gb|EDO16566.1| hypothetical protein Kpol_1064p48 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 466

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 223/513 (43%), Gaps = 108/513 (21%)

Query: 63  VPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELF 122
           V +C  C   +    + C+ C    C    ++SH   H  K      H   V+     L+
Sbjct: 43  VMKCADCHQINEGTNFMCLQCGYCGCW---NNSHFREHNLKVD----HVFGVNSTNGLLY 95

Query: 123 CCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNAS 182
           C  C D + D +   A ++                       + W          V++ S
Sbjct: 96  CFKCDDYIGDSELINASIIG----------------------KYWDD--------VSSKS 125

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
            I  MS  +G     L GL N+G+TC+++ ++Q L   P    Y L+  H +  C++ + 
Sbjct: 126 CIPLMSKRDG-----LSGLVNMGSTCYVSCIIQCLVRNPYFLKYSLNQSHFK-ICKTHDP 179

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAK--------FLYSWWRHASNLASYEQQDAHEFF 294
              C++C LD++ +  +    +     K         L   W+   NLA Y QQDAHEF+
Sbjct: 180 TT-CISCALDSIVTDFYGISDLDDDVKKTNNDGLIDLLTCSWKINQNLAGYSQQDAHEFW 238

Query: 295 ISMLDGIHEKVEKD----QHKPRSQGNGDC--CIAHRVFSGILRSDVMCMACGFTS-TTF 347
             +L+ +H + + +       P  +GN +   CI H+VF G L+S ++C  C   + TT 
Sbjct: 239 QFLLNRLHSEYKSNIGPTDTAPLKEGNHELCNCIYHKVFQGFLKSSIVCPECNSDAKTTI 298

Query: 348 DPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
           +P +D SLD++                               G +TL  CL+ F + E+L
Sbjct: 299 EPFMDLSLDIK-------------------------------GKNTLYECLNSFHKKEQL 327

Query: 408 GSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLD 467
             D  + C+ C   Q+  KQ+++ KL  V  F  KRFEH  +   S K++  ++FPL L+
Sbjct: 328 -HDFDYHCKNCNTSQDPTKQLAVAKLSPVLLFQFKRFEH-LLSGSSIKLNDVIEFPLYLN 385

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL- 526
           M  Y     +  R          D+SN+  +P   +EL  ++ HTG ++ GHY    ++ 
Sbjct: 386 MKDYCD---VEQR----------DDSNS--KPDLIYELIGIICHTGTVNEGHYTAICKIP 430

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             +W K +D+ +T ++E T+   Q Y++ Y  K
Sbjct: 431 EGQWIKFNDSMVTIISEETMLKEQAYLLIYTIK 463


>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
           guttata]
          Length = 625

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 192/417 (46%), Gaps = 83/417 (19%)

Query: 170 DLRER-----SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR 224
           DLR R     SL+V+    +    + +    +GL GL NLGNTCFMNS+LQ L ++  LR
Sbjct: 253 DLRPRTSMPGSLLVSTFVGLVLNKTKSSKAVQGLTGLRNLGNTCFMNSILQCLSNSKELR 312

Query: 225 NYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLA 283
           +Y L +++ R    + + +R  L  +   +   ++        SP++F     R+A    
Sbjct: 313 DYCLQNQYLR-DLNNNSRMRTALMSEFAKLIQLLWTSSPNESVSPSEFKTQIQRYAPRFV 371

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRS---------------------QGNGDCCI 322
            Y QQDA EF   +LDG+H +V +   +PR+                     Q   D  I
Sbjct: 372 GYNQQDAQEFLRFLLDGLHSEVNRVLVRPRASTDSLDHLPDDEKSRQMWRRYQEREDSRI 431

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
           +  +F G L+S + C  CG+ ST FDP  D SL + P +G                    
Sbjct: 432 SD-LFVGQLKSSLTCSECGYCSTAFDPFWDLSLPI-PKKG-------------------- 469

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                  G  TLM CL  FT+ + L  D+K  C +C+ R    K+ SI+K P +   H+K
Sbjct: 470 ------YGEVTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLK 523

Query: 443 RFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           RF  + +R  S K+  ++ FPL  LD+  + S S                         +
Sbjct: 524 RFSEARIR--SSKLTTFVNFPLKDLDLREFASQSCNH----------------------A 559

Query: 502 EFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            + L+AV  H+G    GHY  Y +  +S++W+  +D+ +T ++ + VR++  Y++FY
Sbjct: 560 VYNLYAVSNHSGTTMGGHYTAYCKSPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 616


>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
           rubripes]
          Length = 395

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 175/386 (45%), Gaps = 75/386 (19%)

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
           P GL GL NLGNTCFMN++LQ L +TP LR+Y L++ H R            L  +   +
Sbjct: 46  PHGLVGLRNLGNTCFMNTILQCLSNTPDLRDYCLTNVH-RLDLGDNCTANTTLMEEFAKL 104

Query: 255 FSAI-FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
             ++   G     SP+       ++        QQDA EF   +LDG+H  V +    P+
Sbjct: 105 IQSLCLSGSNEAISPSDVWKQIQQYGPKFVGCNQQDAQEFLRFLLDGLHNDVNRASVLPK 164

Query: 314 SQGN-----GDCCIAHR---------------VFSGILRSDVMCMACGFTSTTFDPCVDF 353
             G+     GD   + R               +F G L+S V C  CGFTST FDP  D 
Sbjct: 165 VSGHDNDHLGDDEKSKRMWNLYLEREDSKVVDLFVGQLKSSVTCTFCGFTSTVFDPFWDL 224

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           S+ + P Q SS +                          TL  CL  FT+ + L  D+  
Sbjct: 225 SIPI-PAQKSSEEV-------------------------TLKDCLRLFTKEDVLDGDESP 258

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYL 472
            C +C+ R++  K+ SI++ P +   H+KRF  SSVR  + K+  Y+ FPL  L+M    
Sbjct: 259 MCCRCKSRRKCTKRFSIQRFPQILVLHLKRFSDSSVR--TSKLSTYVNFPLKELEM---- 312

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN--KW 530
                      R F   G E  T       ++L+AV  H+G    GHY  Y R  +  +W
Sbjct: 313 -----------REFATTGGERVT-------YDLYAVSNHSGNAMGGHYTAYCRHPSLGEW 354

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFY 556
           Y  +D+ ++ V+   +R++  Y++FY
Sbjct: 355 YSYNDSRVSPVSTANIRSSNAYLLFY 380


>gi|401882010|gb|EJT46285.1| ubiquitin specific protease [Trichosporon asahii var. asahii CBS
           2479]
 gi|406700958|gb|EKD04117.1| ubiquitin specific protease [Trichosporon asahii var. asahii CBS
           8904]
          Length = 261

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 140/290 (48%), Gaps = 55/290 (18%)

Query: 276 WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDV 335
           W  +S L  Y QQDAH FF++ LD IH          + Q +   CIAH+ F+G L S V
Sbjct: 2   WHTSSELEGYGQQDAHSFFLAALDQIHAHA-------KGQLSSCNCIAHQTFAGFLVSTV 54

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C AC   +TT DP +D  LD  PN G                              TL 
Sbjct: 55  TCSACAAKNTTIDPILDIQLDFPPNPGPEPL--------------------------TLA 88

Query: 396 GCLDRFTRPERLGSDQKFFCQQC--QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
             L R+   E++G    + C+QC    +  + ++++I+KLP V  F +KRF H +    S
Sbjct: 89  AMLRRYCAEEKIGGGS-YRCEQCGGGPKVHATRKLAIKKLPPVLSFQMKRFAHGAT---S 144

Query: 454 RKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
            KV+  ++FP  L+M PY+                D  E+ ++ E    ++LFAVVTH G
Sbjct: 145 SKVELPVKFPSHLNMRPYV----------------DDTENESVPESLFAYDLFAVVTHEG 188

Query: 514 KLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYY 563
           KLD GHY  ++R  ++W+ CDD  +T        A + YM+FYV+K L Y
Sbjct: 189 KLDNGHYWAHVRSGDEWWHCDDDKVTPTTLAGALAQKAYMLFYVRKSLAY 238


>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
          Length = 563

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 189/407 (46%), Gaps = 73/407 (17%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF---- 227
           R++ L +N  S  D          + + GL NLGNTCFMN+VLQ+L +      YF    
Sbjct: 207 RQKGLPLNGKSQKD----------KKIVGLKNLGNTCFMNAVLQSLNNIQEFSYYFSQLP 256

Query: 228 -LSDRHN-RYYCQSKNGVR-----LCLACDLDTMFSAI---FCGDRMPYSPAKFLYSWWR 277
            L  + N R    S++  R     + +A +L  +   +    CG +   SP       W+
Sbjct: 257 SLEMKTNGRKVYHSRSYTRQEMHDVVMAEELRKVLINLNTGGCGSKAAISPECLFLVIWK 316

Query: 278 HASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP-RSQG-NGDCCIAHRVFSGILRSDV 335
                  Y+QQDAHEF   MLD +H +++  Q  P R +G      I   VF G L+S+V
Sbjct: 317 VVPRFRGYQQQDAHEFLRYMLDRLHTELQ--QLVPDRPEGVKAPASIVTAVFGGTLQSEV 374

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ACG  S  FDP +D SL+L P  G                        ++    +L 
Sbjct: 375 RCLACGTESKKFDPFLDLSLEL-PESG------------------------RHDAPVSLT 409

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE-HSSVRKMSR 454
            CL  F + E L   +++FC  C+ +Q+S KQ  IR+LP V C H+KRF  H+  R    
Sbjct: 410 DCLASFVQIEELADTERYFCSSCKCKQKSTKQFWIRRLPNVLCLHLKRFRWHNYFRT--- 466

Query: 455 KVDRYLQFP-LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
           KVD  + FP LSLDM+ ++  ++  +R   R               S  ++L AV+ H G
Sbjct: 467 KVDTSISFPLLSLDMSGFVLPNVPDTRRSGR--------------GSLLYDLAAVIVHHG 512

Query: 514 K-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
               +GHY  +     +W+  +D  +   +   V + + Y++FY+++
Sbjct: 513 SGAGSGHYTAFAINEEQWFHFNDQTVRATDSAAVASCKPYILFYIRR 559


>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 855

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 64/363 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL  Y  S +H +  C        C  C +    S   
Sbjct: 93  GLWNLGNTCFLNSVLQCLTYTEPLAAYLQSGKH-KSSCHIAG---FCALCAIQNHVSCAL 148

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  SP   + +    + N     Q+DAHE+ +++L+ +H+          S G  +
Sbjct: 149 QATGRIVSPQDMVGNLRCISRNFRKARQEDAHEYMVNLLESMHKCCLPSGVPSESPGAFE 208

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C ++S  FDP +D SL++                     +
Sbjct: 209 KSLVHKIFGGRLRSQVKCRQCSYSSNKFDPFLDLSLEI--------------------LK 248

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           AD           +L   L  FT  E L G ++++ CQ+C+ + +++KQ++I K P V  
Sbjct: 249 AD-----------SLQKALANFTAAELLDGGEKQYHCQRCKQKVQAVKQLTIHKAPYVLA 297

Query: 439 FHIKRF-EHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            H+KRF  H    K+ +KV    +F  +L++ P++S S             DGD      
Sbjct: 298 IHLKRFYAHDPNIKIKKKV----RFDSALNLKPFVSGS------------SDGD------ 335

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMF 555
               ++ L+ V+ H+G    +GHY  Y+R SN  WY  DD  ++ V E  V   Q YM+F
Sbjct: 336 ---VKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRVSHVGEQEVLNQQAYMLF 392

Query: 556 YVQ 558
           YV+
Sbjct: 393 YVR 395


>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
           gallopavo]
          Length = 549

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 185/397 (46%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D MSS    + +GL GL NLGNTCFMNS+LQ L +T  LR+Y L +++ R    + + +R
Sbjct: 200 DPMSS---KVVQGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRD-LNNNSRMR 255

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   ++        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 256 TALMSEFAKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHS 315

Query: 304 KVEKDQHKPRS---------------------QGNGDCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +PR+                     Q   D  ++  +F G L+S + C  CG+
Sbjct: 316 EVNRVLVRPRANADTLDHLPDDEKSRQMWRRYQEREDSRVSD-LFVGQLKSSLTCSECGY 374

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL + P +G                           G  TLM CL  FT
Sbjct: 375 CSTAFDPFWDLSLPI-PKKG--------------------------YGEVTLMDCLRLFT 407

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C +C+ R    K+ SI+K P +   H+KRF  + +R  + K+  ++ F
Sbjct: 408 KEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIR--ASKLSTFVNF 465

Query: 463 PLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S S                         + + L+AV  H+G    GHY 
Sbjct: 466 PLKDLDLREFASQSC----------------------NHAVYNLYAVSNHSGTTMGGHYT 503

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y +  +S++W+  +D+ +T ++ + VR++  Y++FY
Sbjct: 504 AYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 540


>gi|296088835|emb|CBI38293.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 171/362 (47%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL  Y  S +H      S +    C  C +    S   
Sbjct: 108 GLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQ----NSCHIAGFCALCAIQKHVSRAL 163

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P   + +    + N  +  Q+DAHE+ +++L+ +H+          S    +
Sbjct: 164 QSTGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLETMHKCCLPSGVPSESPSAYE 223

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G+LRS V CM C + S  FDP +D SL++                     +
Sbjct: 224 KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEI--------------------FK 263

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           AD ++ +           L  FT  E+L G ++++ CQ+C+ + ++LKQ+++ K P V  
Sbjct: 264 ADSLHKA-----------LMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLT 312

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF         +K+D+ + F  ++D+ P++S S                      E
Sbjct: 313 IHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSY---------------------E 348

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
            + ++ L+ V+ H G    +GHY  ++R S   WY  DD  + +V+E TV   + YM+FY
Sbjct: 349 ENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFY 408

Query: 557 VQ 558
           V+
Sbjct: 409 VR 410


>gi|37231574|gb|AAH58419.1| Usp22 protein, partial [Mus musculus]
          Length = 189

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 117/180 (65%), Gaps = 9/180 (5%)

Query: 386 SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
           S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFE
Sbjct: 18  SHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 77

Query: 446 HSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
           HS+  K+ RK+  Y+ FPL LDM P+++SS      G    P D     +LN   +++ L
Sbjct: 78  HSA--KLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLD-----SLNN-DNKYSL 129

Query: 506 FAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           FAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 130 FAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 189


>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
          Length = 412

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 196/451 (43%), Gaps = 84/451 (18%)

Query: 133 RDFDAAVVLAHTTSIIQSSKP---ENLRK-RRRIDYRPWSPDLRERSLMVNNASPIDSMS 188
           +D +   VL       Q S P   E  RK RRR+       +   RS  ++N    DS +
Sbjct: 10  KDLNNETVLPEIRGGQQRSSPDRDETTRKNRRRV------SEHASRSNSLSNGYNTDSST 63

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           S +    RG+ GL NLGNTCFMNSV+Q L +T  LR+Y   D H     ++ + ++  L 
Sbjct: 64  SLSN---RGIVGLRNLGNTCFMNSVIQCLSNTRLLRDYCRRDEHKDEVNKTTSNMKGALI 120

Query: 249 CDLDTMFSAIFCGDRMPY-SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-- 305
                +  +I+ G    + SP  F     R A     Y QQDA EF + +L+G+HE V  
Sbjct: 121 NAFANLMHSIWKGAPDTHVSPNDFKSQIARFAKRFVGYNQQDAQEFLMYLLEGLHEDVNR 180

Query: 306 --EKDQHKPRSQGNGDCCIAHR---------------VFSGILRSDVMCMACGFTSTTFD 348
             EK +++   + +     A                 +F G L+S + C  CG  S TFD
Sbjct: 181 VKEKRKNRIYDEDDSKTVSAQEMWKMYLHQNDSKIVDIFVGQLKSSLTCTGCGHVSDTFD 240

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P  D SL ++   G     S                         L  C + FT  E L 
Sbjct: 241 PFWDLSLPIKKGHGYGNDVS-------------------------LESCFELFTSEEVLD 275

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLD 467
            D+K  C +C+ RQ+  K  SI++ P V   H+KRF   S  +   K+   + FPL SL+
Sbjct: 276 GDEKPMCSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYR--SKLSTMVNFPLQSLE 333

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-- 525
           +  + +                       N   + + LFAV  H+G    GHY  Y +  
Sbjct: 334 LNQFAAEK---------------------NGAPAMYNLFAVSNHSGTPFGGHYTAYTKHP 372

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            ++ W+   D  +++++E+ V++++ Y++FY
Sbjct: 373 ETSTWHHFSDTRVSQISESQVQSSEAYVLFY 403


>gi|384252828|gb|EIE26303.1| hypothetical protein COCSUDRAFT_58843 [Coccomyxa subellipsoidea
           C-169]
          Length = 677

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 109/169 (64%), Gaps = 5/169 (2%)

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
           G ++L+GCL RF RPE LG  +++ C++C+++Q ++KQMSIR+LP V C H+KRFEH  V
Sbjct: 505 GAASLVGCLHRFVRPESLGPGERWTCERCRLQQRAVKQMSIRRLPPVLCLHVKRFEHMGV 564

Query: 450 RKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF--DGDESNTLNEPSSEFELFA 507
            K   K++  L F   LD+ PYLSS++L+ RF  +  P       SN  +E    +EL+A
Sbjct: 565 GK---KLNTPLLFSAHLDVRPYLSSTVLQKRFTVKRPPERRKNGLSNDSDEVGVIYELYA 621

Query: 508 VVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           VV H G L  GHYV Y++  N WY CDD ++ EV+E T  +   YM++Y
Sbjct: 622 VVCHRGNLQGGHYVAYVKCGNSWYLCDDGFVLEVDEATACSPNAYMLYY 670



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
            R+F G+L+SDVMC ACG TST  DP +D SLD++
Sbjct: 32  QRIFGGLLQSDVMCCACGHTSTALDPFLDISLDIK 66


>gi|13938160|gb|AAH07196.1| USP22 protein, partial [Homo sapiens]
          Length = 173

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 120/180 (66%), Gaps = 9/180 (5%)

Query: 386 SQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE 445
           S   G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFE
Sbjct: 2   SHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 61

Query: 446 HSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
           HS+  K+ RK+  Y+ FPL LDM P+++SS   SR   ++       +++LN   +++ L
Sbjct: 62  HSA--KLRRKITTYVSFPLELDMTPFMASSK-ESRMNGQY----QQPTDSLNN-DNKYSL 113

Query: 506 FAVVTHTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           FAVV H G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 114 FAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 173


>gi|378732200|gb|EHY58659.1| ubiquitin carboxyl-terminal hydrolase 8 [Exophiala dermatitidis
           NIH/UT8656]
          Length = 593

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 149/608 (24%), Positives = 240/608 (39%), Gaps = 157/608 (25%)

Query: 64  PRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFC 123
           PR G+  D +    Y C+ C+ +    P    H         S   H+ AV      ++C
Sbjct: 30  PRNGIDRDFA---QYVCLQCS-MPGSFPSLDKHF--------SESKHKFAVS--EKSVYC 75

Query: 124 CACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
             C+D VYD             +++ + K                    +R L  +N   
Sbjct: 76  GGCKDLVYD------------PALLSNGK--------------------KRKLAESNEED 103

Query: 184 IDSMSSSNGDLP---RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC--- 237
              ++++    P    G+RGL NLG TC+MN+VLQ + H P L +YFL   H  + C   
Sbjct: 104 DSYLTANTSQRPCGRSGVRGLFNLGETCYMNAVLQMMVHNPLLASYFLGMGHPIHTCPIS 163

Query: 238 -------------------QSKNGVRLCLACDLDTMFSAIFCGDR-MPYSPAKFLYSWWR 277
                              Q K  +++C+AC +  +FS +   D+ +P      L++ W+
Sbjct: 164 KEPEKKANESSDSEDEGAEQEKREMQVCVACGMTELFSDVTMVDQPLPAHAVNLLFASWK 223

Query: 278 HASNLASYEQQDAHEFFISMLDGIHEKVEK--DQHKPRS--QGNGD-------CCIAHRV 326
           +   ++   QQDA E+F+ ++D +HE V +    HK  S    NG         C  H+V
Sbjct: 224 NIPQMSGKGQQDAQEWFMYIIDRLHEAVAQYTTPHKTNSINAANGINTFNRQCVCFFHKV 283

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLE------------------PNQGSSMKTS 368
           F G   S + C  C   S+  D     SLD +                     G++  T+
Sbjct: 284 FYGRYNSQITCDKCHTVSSREDEFSSISLDFKRQVKRKRKAAKEAAAAKAVTDGNAATTT 343

Query: 369 STKSNHSCNCEADGMNSSQN-----CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           +T +    + +    N++ N       + TL  CL  +T PE L  DQ + C +C  RQ 
Sbjct: 344 TTTNAAGGDNKTKANNNAANKEPLRITVPTLHECLRAYTAPEPLSPDQ-YTCTKCDSRQP 402

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRY---LQFPLSLDMAPYLSSSILRSR 480
           + KQ  +RKLP + C H+KRF    +   +   ++Y   L FPL LDM PY +     + 
Sbjct: 403 ATKQTRLRKLPAILCVHVKRFGMRQLGPGNYVPEKYEGKLDFPLHLDMGPYTTKPPQWND 462

Query: 481 FGNRFFPFD--------------------------------GDESNTLNEPSSE------ 502
           +G+ ++  D                                GD  +  N+   +      
Sbjct: 463 YGDGYYDVDDNVEADVKKSQANGATKNENSKANVNEKATTNGDHKSNTNKADEDAKNHHR 522

Query: 503 --------FELFAVVTHTG-KLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYM 553
                   ++L  VV H G     GHY  + R  NKW++ DD  ++      V   + Y+
Sbjct: 523 RRGRDAYMYDLDCVVVHQGDNAHNGHYFAFCRQDNKWFRFDDEIVSATTTEDVLRQEAYL 582

Query: 554 MFYVQKML 561
           +FY  + L
Sbjct: 583 LFYSLRSL 590


>gi|301104609|ref|XP_002901389.1| ubiquitin-specific protease, putative [Phytophthora infestans
           T30-4]
 gi|262100864|gb|EEY58916.1| ubiquitin-specific protease, putative [Phytophthora infestans
           T30-4]
          Length = 563

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 182/395 (46%), Gaps = 59/395 (14%)

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV---RLCLACDL 251
           PRGL GL NLGNTCFMNS LQ + + P L  YF    H   Y +  N     +  LA   
Sbjct: 191 PRGLVGLQNLGNTCFMNSCLQCVSNLPALVKYF----HPGLYAREINDTSPTKGALATAF 246

Query: 252 DTMFSAIFCGDRMPYS-PAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
             +  A+  GD+   + P +      + AS    Y+QQDA EF   +LDG+HE + + + 
Sbjct: 247 GDLIKALRTGDKFTATRPVELKRVIGKIASRYTGYDQQDAQEFLRFLLDGLHEDLNRVRR 306

Query: 311 KP-------RSQGNG--------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDP 349
           KP       R +                 +      +F G LRS++ C  C   S  FD 
Sbjct: 307 KPAYYEIKDRPEAKDRDVSDEYWKFYLERNASTLSELFCGQLRSEIRCETCNHRSLCFDV 366

Query: 350 CVDFSLDLEPNQG--SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL 407
             D SL +    G  S+M+ SS   +      A G  +S      ++  CL  +T  E L
Sbjct: 367 FWDLSLPVPKKIGKNSTMRISSGFFSGGRTASASGDTASA----MSIHDCLKAYTEQEFL 422

Query: 408 GSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SL 466
           G D  ++CQ+C+  +   K++S+ +LP V   H+KRF +S+  +   KV   + FP  SL
Sbjct: 423 GDDAAYYCQKCKTHRSVAKKISVYRLPNVLVLHLKRFSYSTFSR--DKVSTSISFPAQSL 480

Query: 467 DMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL 526
           D+A Y +S  +           DG         S+ ++L  +V H G L+ GHY      
Sbjct: 481 DIAEYCASDAV----------VDG---------STLYDLTGIVHHMGSLNGGHYTAECLN 521

Query: 527 SN--KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++  +W+  +D  +T + +  + ++  YM+FY ++
Sbjct: 522 ADTQEWFDFNDGSVTAIKKPELYSSSAYMLFYQRR 556


>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2
 gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
          Length = 357

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 180/386 (46%), Gaps = 78/386 (20%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L +++ R    + + +R  L  +   + 
Sbjct: 16  QGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDL-NNNSRMRTALMSEFAKLI 74

Query: 256 SAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
             ++        SP++F     R+A     Y QQDA EF   +LDG+H +V +   +PR+
Sbjct: 75  QLLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRA 134

Query: 315 ---------------------QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
                                Q   D  ++  +F G L+S + C  CG+ ST FDP  D 
Sbjct: 135 NADTLDHLPDDEKSRQMWRRYQEREDSRVSD-LFVGQLKSSLTCSECGYCSTAFDPFWDL 193

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SL + P +G                           G  TLM CL  FT+ + L  D+K 
Sbjct: 194 SLPI-PKKGY--------------------------GEVTLMDCLRLFTKEDVLDGDEKP 226

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYL 472
            C +C+ R    K+ SI+K P +   H+KRF  + +R  + K+  ++ FPL  LD+  + 
Sbjct: 227 TCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIR--ASKLTTFVNFPLKDLDLREFA 284

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKW 530
           S S                         + + L+AV  H+G    GHY  Y +  +S++W
Sbjct: 285 SQSC----------------------NHAVYNLYAVSNHSGTTMGGHYTAYCKSPISSEW 322

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFY 556
           +  +D+ +T ++ + VR++  Y++FY
Sbjct: 323 HSFNDSRVTPMSSSHVRSSDAYLLFY 348


>gi|359495422|ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
           vinifera]
          Length = 997

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 170/362 (46%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL  Y  S +H      S +    C  C +    S   
Sbjct: 108 GLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQ----NSCHIAGFCALCAIQKHVSRAL 163

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P   + +    + N  +  Q+DAHE+ +++L+ +H+          S    +
Sbjct: 164 QSTGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLETMHKCCLPSGVPSESPSAYE 223

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G+LRS V CM C + S  FDP +D SL++                     +
Sbjct: 224 KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEI--------------------FK 263

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           AD           +L   L  FT  E+L G ++++ CQ+C+ + ++LKQ+++ K P V  
Sbjct: 264 AD-----------SLHKALMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLT 312

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF         +K+D+ + F  ++D+ P++S S                      E
Sbjct: 313 IHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSY---------------------E 348

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
            + ++ L+ V+ H G    +GHY  ++R S   WY  DD  + +V+E TV   + YM+FY
Sbjct: 349 ENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFY 408

Query: 557 VQ 558
           V+
Sbjct: 409 VR 410


>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
           latipes]
          Length = 401

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 185/430 (43%), Gaps = 91/430 (21%)

Query: 152 KPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMN 211
           KPE  RK +R            RS++V+    +    + N   P+GL GL NLGNTCFMN
Sbjct: 23  KPELRRKSQRFS----------RSVLVSTFMGLIINQAKNKS-PQGLVGLRNLGNTCFMN 71

Query: 212 SVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAK 270
           S+LQ L +T  LR+Y L + H        N     L  +   +  +++    +   SP+ 
Sbjct: 72  SILQCLSNTSELRDYCLRNVHR---LDVNNRTNAALMEEFAKLTQSLWTSVNIEAISPSD 128

Query: 271 FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ--------------- 315
           F     R A       QQDA EF  S+LDG+H +V +   +PRS                
Sbjct: 129 FRSEIQRVAPKFVGCNQQDAQEFLRSLLDGLHNEVNRVTVRPRSSVEDFDHYSDEEKSKR 188

Query: 316 ------GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
                    D  +   +F G L+S + C  CGF ST FDP  D S+ +            
Sbjct: 189 MWNLYLAREDSKVVD-LFVGQLKSSLTCTVCGFRSTMFDPFWDLSIPI------------ 235

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                          + +  G  TL  CL  FT+ + L  ++K  C +C+ R++  K+ S
Sbjct: 236 ---------------AQERPGEVTLKDCLRLFTKEDVLDGEEKPTCNKCKARRKCTKRFS 280

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPF 488
           I+K P +   H+KRF  S+ R  S K+  ++ FPL  LD+               R F  
Sbjct: 281 IQKFPQILVIHLKRFSDSNSR--SSKLSTFVNFPLKELDL---------------REFSA 323

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTV 546
           D  E    N       L+AV  HTG    GHY  Y R     +WY  +D+ ++ ++   V
Sbjct: 324 DNSEHPVYN-------LYAVSNHTGNTLGGHYTAYCRNPALGEWYSYNDSRVSPISSGQV 376

Query: 547 RAAQGYMMFY 556
           R +  Y++FY
Sbjct: 377 RTSNAYVLFY 386


>gi|449275065|gb|EMC84050.1| Ubiquitin carboxyl-terminal hydrolase 36, partial [Columba livia]
          Length = 349

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 171/378 (45%), Gaps = 63/378 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P + ++ +   + R   GL NLGNTCF+N+ LQ L +TPPL NY LS  H+R   QS   
Sbjct: 33  PAERLAMNWQHIYRVGAGLLNLGNTCFLNATLQCLTYTPPLANYLLSKEHSRTCHQSG-- 90

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +    +  F        P  F+ +  R A ++    Q+DAHEF    +D + 
Sbjct: 91  --FCMMCVMQNHVTQAFANSGNAIKPVSFVRNLKRIAPHIRFGRQEDAHEFLRFTIDAMQ 148

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +   +D  +   Q      I H++F G L+S V C  C   S TFDPC+D +L++     
Sbjct: 149 KACLRDHARSDRQTQATTLI-HQIFGGYLQSRVKCSVCRGVSDTFDPCLDVALEITQ--- 204

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        + ++  L+ F RP+ LG    + C +C+ + 
Sbjct: 205 ----------------------------AANIVRALELFVRPDLLGGANAYMCARCKKKV 236

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ +I + P V    +KRF   +  K+++ V     +P  L++ PY+S +       
Sbjct: 237 SATKRFTIHRAPNVLTLALKRFAGFTGGKITKDVG----YPELLNIRPYMSQT------- 285

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITE 540
                  GD           + L+AV+ H+G    AGHY  Y++ SN +WY+ +D  +  
Sbjct: 286 ------SGDP--------VMYGLYAVLVHSGYSSHAGHYYCYVKASNGQWYQMNDNVVRP 331

Query: 541 VNENTVRAAQGYMMFYVQ 558
            N   V   Q Y++FYV+
Sbjct: 332 SNVKVVLNQQAYVLFYVR 349


>gi|328854921|gb|EGG04050.1| putative ubiquitin C-terminal hydrolase Ubp8 [Melampsora
           larici-populina 98AG31]
          Length = 450

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 192/451 (42%), Gaps = 86/451 (19%)

Query: 112 IAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDL 171
           + +D+   E  C  C D +   D +  V+     SI + S P  L +  +  + P     
Sbjct: 75  LGLDMVCREFICLVCGDVIRPDDSELKVISKKLFSIKKPSLPSCLSRTTQHIFPP----- 129

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR 231
                                      RG +NLG +C+MN++LQ L   P  + Y L D 
Sbjct: 130 ---------------------------RGFSNLGKSCYMNAILQILLRIPEFQCYLLMDH 162

Query: 232 HNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRM-PYSPAKFLYSWWRHAS---NLASYEQ 287
           HNR      +   LC  C+L  +      GDR    +P  FLY+ W ++    + A Y++
Sbjct: 163 HNRDRQHPSDEDPLCCTCELVNLLQGTVSGDRFKEITPVGFLYTLWMNSGDGEDFAGYKE 222

Query: 288 QDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTT 346
            DAHE  ++ L+ IH   +       +  +  C C  H +F   L+S+++C  C  TS  
Sbjct: 223 GDAHECLLACLNQIHSTTQGS-----NPLDTTCHCPIHLLFRCELKSELICGNCNSTSHK 277

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            DP +D SL++                      A   +  Q      L+ CL+ FT  E 
Sbjct: 278 VDPILDLSLEI----------------------AHLTHLDQ----LRLVDCLESFTTKEA 311

Query: 407 LGSDQKFFCQQCQVRQE-SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS 465
           L  ++ + C +CQ+    + K + I KLP + C  +KRFEH  V+  S K+DR++QFPL 
Sbjct: 312 L-KEKCYTCAECQMASPVTTKSLKISKLPHILCIQLKRFEH-QVQGNSVKLDRFVQFPLM 369

Query: 466 LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
           LDM PY           N   P D D+S         ++L  +V H G   +GHY   + 
Sbjct: 370 LDMKPYTV---------NPRNPNDPDQSGYF------YKLTGIVRHQGSATSGHYQVIVC 414

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
               ++   DA +T +    V A + Y++ Y
Sbjct: 415 QDELYFSFSDANVTVMRLKDVLAVEAYILVY 445


>gi|302142802|emb|CBI20097.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 170/365 (46%), Gaps = 68/365 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL---CLACDLDTMFS 256
           GL NLGNTC++NSVLQ L +T PL  Y  S +H       +N  R+   C  C +    S
Sbjct: 109 GLENLGNTCYLNSVLQCLTYTEPLAAYLQSGKH-------QNSCRIAGFCALCAIQKHVS 161

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
                      P   + +    + N  +  Q+DAHE+ + +L+ +H+          S  
Sbjct: 162 RALQSTGRILVPKDLVSNLRCISRNFRNARQEDAHEYMVHLLETMHKCCLPSGVPSESPS 221

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             +  + H++F G+LRS V CM C + S  FDP +D SL++                   
Sbjct: 222 AYEKSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEI------------------- 262

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPL 435
             +AD           +L   L  FT  E+L G ++++ CQ+C+ + ++LKQ+++ K P 
Sbjct: 263 -FKAD-----------SLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPY 310

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V   H+KRF         +K+D+ + F  ++D+ P++S S                    
Sbjct: 311 VLTIHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSY------------------- 348

Query: 496 LNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYM 553
             E + ++ L+ V+ H G    +GHY  ++R S   WY  DD  + +V+E TV   + YM
Sbjct: 349 --EENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYM 406

Query: 554 MFYVQ 558
           +FYV+
Sbjct: 407 LFYVR 411


>gi|225461822|ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
           vinifera]
          Length = 955

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 170/365 (46%), Gaps = 68/365 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL---CLACDLDTMFS 256
           GL NLGNTC++NSVLQ L +T PL  Y  S +H       +N  R+   C  C +    S
Sbjct: 109 GLENLGNTCYLNSVLQCLTYTEPLAAYLQSGKH-------QNSCRIAGFCALCAIQKHVS 161

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
                      P   + +    + N  +  Q+DAHE+ + +L+ +H+          S  
Sbjct: 162 RALQSTGRILVPKDLVSNLRCISRNFRNARQEDAHEYMVHLLETMHKCCLPSGVPSESPS 221

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             +  + H++F G+LRS V CM C + S  FDP +D SL++                   
Sbjct: 222 AYEKSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEI------------------- 262

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPL 435
             +AD           +L   L  FT  E+L G ++++ CQ+C+ + ++LKQ+++ K P 
Sbjct: 263 -FKAD-----------SLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPY 310

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V   H+KRF         +K+D+ + F  ++D+ P++S S                    
Sbjct: 311 VLTIHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSY------------------- 348

Query: 496 LNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYM 553
             E + ++ L+ V+ H G    +GHY  ++R S   WY  DD  + +V+E TV   + YM
Sbjct: 349 --EENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYM 406

Query: 554 MFYVQ 558
           +FYV+
Sbjct: 407 LFYVR 411


>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
            aries]
          Length = 1086

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 184/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L +TP L +YF      D  NR 
Sbjct: 726  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRS 785

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 786  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 842

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 843  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 902

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 903  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 933

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 934  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 991

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 992  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1030

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1031 LDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFYT 1075


>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
           aries]
          Length = 1009

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 184/405 (45%), Gaps = 82/405 (20%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
           +AS I +++   G     L GL NLGNTC+MNS+LQ L +TP L +YF      D  NR 
Sbjct: 649 SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRS 708

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                 G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 709 NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 765

Query: 296 SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
            ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 766 FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 825

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 826 QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 856

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 857 DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 914

Query: 456 VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
           +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 915 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 953

Query: 515 LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 954 LDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFYT 998


>gi|83767433|dbj|BAE57572.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 286

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 148/296 (50%), Gaps = 49/296 (16%)

Query: 266 YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC-CIAH 324
           ++    L + WR +S LA Y+QQDAHE++  ++D +H   +   H+   +G   C C  H
Sbjct: 24  FAALSLLLASWRASSALAGYQQQDAHEYYQFLVDKLHSSTD-GHHENHEKG---CPCFFH 79

Query: 325 RVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMN 384
           + F G LRS V C  CG  + T DP VD SLD++                    +   M 
Sbjct: 80  KTFYGKLRSSVTCDKCGNVTRTDDPMVDLSLDVQ-----------------VQAKKRAMG 122

Query: 385 SSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ-VRQESLKQMSIRKLPLVSCFHIKR 443
            +      TL GCL+ FT PE+L +   + C  C    Q++ KQ+ I+KLP + C  +KR
Sbjct: 123 GAGPSSTPTLSGCLESFTSPEKLMAGV-YNCSGCGGSAQKATKQLRIKKLPAILCMQLKR 181

Query: 444 FEHSSVRKMSRKVDRYLQFPLSLDMAPYLS---SSILRSRFGNRFFPFDGDESNTLNEPS 500
           +EH+    +S K++  + FPLS++M PY +   S + +SR+                   
Sbjct: 182 YEHT--FSVSEKLEGRIDFPLSINMLPYTTNPNSHVDKSRY------------------- 220

Query: 501 SEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             ++L + V H GKLDAGHY  Y R  ++W   +D  +T V E  V +A  Y++FY
Sbjct: 221 -IYDLSSAVVHKGKLDAGHYYAYCRQGDEWILFNDDQVTSVTEADVLSADAYLLFY 275


>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
 gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
 gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
          Length = 1085

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 184/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L +TP L +YF      D  NR 
Sbjct: 725  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRS 784

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 785  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 841

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 842  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 901

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 902  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 932

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 933  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 990

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 991  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1029

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1030 LDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFYT 1074


>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 312

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 167/361 (46%), Gaps = 57/361 (15%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NSVLQ L +TPPL  Y  S +H +  C++      C  C L        
Sbjct: 1   GLSNLGNTCFLNSVLQCLTYTPPLAGYLDSGQH-KATCRAAG---FCAMCALQEHVRQAL 56

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  SP+  + +    + +   + Q+DAHE+   +++G+H        K  S  + +
Sbjct: 57  ASSGGAVSPSTLVKNLRCISKSFRMWRQEDAHEYLRCLIEGLHNCCLPPGVKSNSAVSQE 116

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D SL++                      
Sbjct: 117 RSLIHKIFGGRLRSQVKCTVCLTCSNTYDPLLDLSLEI--------------------VR 156

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
           AD +  +           L+RFT  E L  D K+ C  C  +  +LKQ +I K P +   
Sbjct: 157 ADSLTKA-----------LNRFTAVEALEGDNKYHCSHCNKKVRALKQFTIDKPPNILTI 205

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
             KRF  SS      K+D+ ++F  +LD+ PY+S+                      +  
Sbjct: 206 QFKRF--SSTGSSGGKIDKKIEFGRTLDLKPYISN------------------PQVCSAT 245

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            +++ L+AV+ H G    +GHY  ++R   + W+  DD+ + +V+E +V   + Y++FY+
Sbjct: 246 DAKYSLYAVLVHAGWSTHSGHYYCFVRTKGDMWHALDDSRVKQVSEKSVLDQKAYILFYI 305

Query: 558 Q 558
           +
Sbjct: 306 R 306


>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
            latipes]
          Length = 1074

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 184/405 (45%), Gaps = 84/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +A+ I S++ + G +   L GL NLGNTC+MNS+LQ L +TP +  YF S+    YY + 
Sbjct: 723  SAAKIRSLNPTFGGMGASLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNSN----YYLED 778

Query: 240  KN-----GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             N     G +   A +   +  A++ G     SP  F  +  +     A Y+QQD+ E  
Sbjct: 779  INRSNILGHKGEFAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQFAGYDQQDSQELL 838

Query: 295  ISMLDGIHEKVEKDQHKPR----------SQGNGDCC----------IAHRVFSGILRSD 334
            + ++DG+HE + K  +K R           Q   D            I   +F G  +S 
Sbjct: 839  LFLMDGLHEDLNKADNKKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVALFQGQFKST 898

Query: 335  VMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
            V C  C   S TF+  +  SL L                           S+  C   +L
Sbjct: 899  VQCSTCHRKSRTFETFMYLSLPL--------------------------ASTSKC---SL 929

Query: 395  MGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
              CL  F++ E+L  + K FC+ C+  ++S K++ I K+P +   H+KRF +    +  +
Sbjct: 930  QDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEG--RWKQ 987

Query: 455  KVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
            K+   + FPL +LD+  Y+   I   +   R++                  L+ V  H G
Sbjct: 988  KLQTTVDFPLDNLDLTQYV---IGPKQTLKRYY------------------LYGVSNHYG 1026

Query: 514  KLDAGHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFY 556
             LD GHY  Y + + K  WYK DD  ++E++ ++V+++  Y++FY
Sbjct: 1027 GLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1071


>gi|19263936|gb|AAH25317.1| USP22 protein, partial [Homo sapiens]
          Length = 173

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 9/176 (5%)

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
           G +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+ 
Sbjct: 6   GTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSA- 64

Query: 450 RKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            K+ RK+  Y+ FPL LDM P+++SS   SR   ++       +++LN   +++ LFAVV
Sbjct: 65  -KLRRKITTYVSFPLELDMTPFMASS-KESRMNGQY----QQPTDSLNN-DNKYSLFAVV 117

Query: 510 THTGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
            H G L++GHY +++R   ++W+KCD A IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 118 NHQGTLESGHYTSFIRQHKDQWFKCDVAIITKASIKDVLDSEGYLLFYHKQFLEYE 173


>gi|297799550|ref|XP_002867659.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
 gi|297313495|gb|EFH43918.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
          Length = 1007

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 160/364 (43%), Gaps = 65/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GN+CF N V Q L  TPPL  YFL   H+R  C  K     C  C  + +     
Sbjct: 541 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRA-CTKKEQ---CFTCGFEKLVLKAK 596

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK--DQHKPRSQGN 317
            G + P SP   L         L + +++DAHEF   ++D +     K  +   P+S   
Sbjct: 597 EG-KSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMPKSSKL 655

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  +    F G LRS + CM C   S   +  +D +++++ +                 
Sbjct: 656 EDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGD----------------- 698

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                        ISTL   L RFTR E L  D K+ C  C+  + + K++ I   P V 
Sbjct: 699 -------------ISTLDDALRRFTRTEILDGDNKYRCGSCKSYERAKKKLKITDPPNVL 745

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF+     K+    ++ ++FP +LD+APY+S                       +
Sbjct: 746 TIALKRFQAGKFGKL----NKLIRFPETLDLAPYVSGG---------------------S 780

Query: 498 EPSSEFELFAVVTHTGKLDA---GHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMM 554
           E S +++L+ V+ H   ++A   GHYV Y+R  NKWYK DD+ +   +   +     YM+
Sbjct: 781 EKSHDYKLYGVIVHLDIMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERIMTKGAYML 840

Query: 555 FYVQ 558
           FY +
Sbjct: 841 FYAR 844


>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
          Length = 450

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 178/386 (46%), Gaps = 78/386 (20%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L +++ R    + + +R  L  +   + 
Sbjct: 109 QGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLR-DLNNNSRMRTALMSEFAKLI 167

Query: 256 SAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
             ++        SP++F     R+A     Y QQDA EF   +LDG+H +V +   +PR+
Sbjct: 168 QLLWTSSPNENVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRA 227

Query: 315 ---------------------QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
                                Q   D  I+  +F G L+S + C  CG+ ST FDP  D 
Sbjct: 228 STDTLDHLPDDEKSRQMWRRYQEREDSRISD-LFVGQLKSSLTCSECGYCSTAFDPFWDL 286

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SL +                             ++ G  TLM CL  FT+ + L  D+K 
Sbjct: 287 SLPIP---------------------------KKSYGEVTLMDCLRLFTKEDVLDGDEKP 319

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYL 472
            C +C+ R    K+ SI+K P +   H+KRF  + +R  + K+  ++ F L  LD+  + 
Sbjct: 320 TCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIR--TSKLTTFVNFQLKDLDLREFA 377

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKW 530
           S S                         + + L+AV  H+G    GHY  Y +  +S++W
Sbjct: 378 SQSC----------------------NHAVYNLYAVSNHSGTTMGGHYTAYCKNPVSSEW 415

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFY 556
           +  +D+ +T ++ + VR++  Y++FY
Sbjct: 416 HSFNDSRVTPMSSSHVRSSDAYLLFY 441


>gi|449517900|ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
           sativus]
          Length = 621

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 186/400 (46%), Gaps = 76/400 (19%)

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH----NRYY 236
           A P +S+S+   +      GL NLGNTCF+N++LQ L HT P      S  H    N   
Sbjct: 51  AFPENSVSAQETESLSAGAGLANLGNTCFINAILQCLTHTAPFVEGLRSANHDMPCNSKI 110

Query: 237 CQSKNGVRLCLACDLDTMFSA----------IFCGDRMPYSPAKFLYSWWRHASNLAS-- 284
             + N   L L  + D++             +F   ++    +K        A + +S  
Sbjct: 111 TVTTNTFSLFLGSN-DSVVDEELRICIHRNFVFASKKLHLDLSKSEIKITTLALDFSSFF 169

Query: 285 --YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGF 342
             Y+Q+DAHEF    LD + E+    + K R     D  + ++VF G L S++ C  CG 
Sbjct: 170 WRYQQEDAHEFMQCFLDKL-ERCMVSEGKDRVSSEDDDLV-NKVFGGRLISNLCCCNCGH 227

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            S T +P VD SL++E                                + +L   L+ FT
Sbjct: 228 CSETHEPLVDLSLEIE-------------------------------NVDSLSSALESFT 256

Query: 403 RPERLGS-DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQ 461
           + ER+G  + KF C+ C+      KQ+ + K+PLV+ FH+KRF+  S      K++++L+
Sbjct: 257 KVERIGDPETKFKCENCKEEVWVEKQLKLEKIPLVTTFHLKRFKADS--SFVEKIEKHLE 314

Query: 462 FPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHY 520
           FPL LD+ PY                  G ++    E   ++EL+A+V HTG    +GHY
Sbjct: 315 FPLELDLKPYT---------------LGGKDA----EVELKYELYAIVEHTGFSSTSGHY 355

Query: 521 VTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            +++R S + W++ DD+ +T V E  V + + Y++ Y +K
Sbjct: 356 FSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKRK 395


>gi|449462061|ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
           sativus]
          Length = 676

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 186/400 (46%), Gaps = 76/400 (19%)

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH----NRYY 236
           A P +S+S+   +      GL NLGNTCF+N++LQ L HT P      S  H    N   
Sbjct: 106 AFPENSVSAQETESLSAGAGLANLGNTCFINAILQCLTHTAPFVEGLRSANHDMPCNSKI 165

Query: 237 CQSKNGVRLCLACDLDTMFSA----------IFCGDRMPYSPAKFLYSWWRHASNLAS-- 284
             + N   L L  + D++             +F   ++    +K        A + +S  
Sbjct: 166 TVTTNTFSLFLGSN-DSVVDEELRICIHRNFVFASKKLHLDLSKSEIKITTLALDFSSFF 224

Query: 285 --YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGF 342
             Y+Q+DAHEF    LD + E+    + K R     D  + ++VF G L S++ C  CG 
Sbjct: 225 WRYQQEDAHEFMQCFLDKL-ERCMVSEGKDRVSSEDDDLV-NKVFGGRLISNLCCCNCGH 282

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            S T +P VD SL++E                                + +L   L+ FT
Sbjct: 283 CSETHEPLVDLSLEIE-------------------------------NVDSLSSALESFT 311

Query: 403 RPERLGS-DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQ 461
           + ER+G  + KF C+ C+      KQ+ + K+PLV+ FH+KRF+  S      K++++L+
Sbjct: 312 KVERIGDPETKFKCENCKEEVWVEKQLKLEKIPLVTTFHLKRFKADS--SFVEKIEKHLE 369

Query: 462 FPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHY 520
           FPL LD+ PY                  G ++    E   ++EL+A+V HTG    +GHY
Sbjct: 370 FPLELDLKPYT---------------LGGKDA----EVELKYELYAIVEHTGFSSTSGHY 410

Query: 521 VTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            +++R S + W++ DD+ +T V E  V + + Y++ Y +K
Sbjct: 411 FSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKRK 450


>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
          Length = 1117

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 185/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY-YCQ 238
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF     NR  Y +
Sbjct: 757  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF-----NRNCYQE 811

Query: 239  SKNGVRLC-----LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
              N   L      +A +   +  A++ G     SP  F  +  +     A Y QQD+ E 
Sbjct: 812  DINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQEL 871

Query: 294  FISMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRS 333
             + ++DG+HE + K D  K   + N D                     I   +F G  +S
Sbjct: 872  LLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQFKS 931

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 932  TVQCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---T 962

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 963  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1020

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD+A Y+                 G ++N       ++ LF+V  H 
Sbjct: 1021 QKLQTSVDFPLENLDLAQYVI----------------GPKNNL-----KKYNLFSVSNHY 1059

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1060 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFYT 1106


>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
          Length = 1002

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 170/361 (47%), Gaps = 61/361 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTCF+NS LQ L +T PL NY  S  HN+  C+       C+ C+L       +
Sbjct: 100 GLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGEHNQ-TCKQPG---FCMMCELQRHIKRCY 155

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   L      A ++    Q+DAHEF   ++D + + +  + H    + + +
Sbjct: 156 ENSGSNIKPQAILQKLKMIAKHMHWGRQEDAHEFLRYVVDSMQKSI-LNGHAKLDKFSKE 214

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + +++F G LRS V C+ C   S T+DP +D SLD++                     
Sbjct: 215 TTVVNQIFGGYLRSQVQCLRCKEKSNTYDPFLDISLDIKT-------------------- 254

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      + +L    +++  PE+L  D  + C +C+ +  +LK+ S+ K P V   
Sbjct: 255 -----------VPSLEKAFEKYVLPEKLDCDNAYMCNRCKQKVPALKRFSVHKPPNVLTV 303

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF++S +  +  K+ R++ FP  L++ PY+S     +R G                 
Sbjct: 304 SLKRFDYSKM--VQGKIGRHVHFPEKLNLRPYMS-----NRGGEPIL------------- 343

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              F L AV+ H+G   ++GHY  Y++ S+  WY  +D+ + +V+ N V  A+ Y++FY 
Sbjct: 344 ---FHLNAVLVHSGYTANSGHYYCYVKASSGSWYCMNDSNVQQVSVNRVLGAEAYVLFYT 400

Query: 558 Q 558
           +
Sbjct: 401 K 401


>gi|440797226|gb|ELR18321.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
           Neff]
          Length = 926

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 227/555 (40%), Gaps = 121/555 (21%)

Query: 68  VCGDSSC----PRLYACMA--CAAVSCHVPPHSSHVAIH---ATKTSSACSHEIAVDVDR 118
            C ++ C    P L+AC+   C  + C     + H+  H   A K +    H + +++  
Sbjct: 34  TCSETQCSHGLPHLWACLGANCTFIGCGRD-QNKHLMAHYNLAKKRNMGEEHCVCINLRT 92

Query: 119 AELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMV 178
             ++C AC ++V       A+ +    S + +S+P                         
Sbjct: 93  KMVWCYACDEEVIVEQLREALAIP-VASPVPASRP------------------------- 126

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
                  + + S     RG  GL NLGNTC+ N+ +Q L + PPLR YFL     RY  +
Sbjct: 127 -------ATALSTSTHTRGACGLANLGNTCYANAAMQCLSNCPPLRTYFL-----RYMAR 174

Query: 239 SKNGVRLC--LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
              G +    L      +   ++ G      P + L    R       Y QQD+ EF   
Sbjct: 175 QVKGRKKTSPLVFHFTQLIYDMWGGRYSSLRPGEVLREIRRFNPMFGGYAQQDSQEFMRC 234

Query: 297 MLDGIHEKVEKD----QHKPRSQGNGDCCIAHRVFS-----------------GILRSDV 335
           +LD +HE  +++    +  P S G+ D     +                    G L S +
Sbjct: 235 LLDRLHEDTKEELPRIESSPTSSGSADSGEKEKETKPPQGHDSDSNGVVESTPGYLLSRI 294

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ---NCGI- 391
            C+ CG  S T D   D S+   P     M    TK       EA+G+ S+    + G+ 
Sbjct: 295 KCLKCGKVSPTKDAFYDLSI---PIPDDKMLDKVTK-----EIEAEGVLSNSKRPSPGLF 346

Query: 392 -------------STLMGCLDRF-TRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                         TL  CL  F T+ E +G+D ++ C+ C+   +S K + I + P + 
Sbjct: 347 SKVTNWLMLSNRTVTLEDCLQAFCTKEELMGAD-RYRCEHCKTLNDSQKFLRIAQPPELL 405

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
           C HIKRF H S      K+   +QFPL  LD++              RF   D D     
Sbjct: 406 CIHIKRFRHDSY--FGGKLSDVVQFPLRDLDIS--------------RFCEQDADAPQV- 448

Query: 497 NEPSSEFELFAVVTHTGKLDAGHYVTYL--RLSNKWYKCDDAWITEVNENTVRAAQGYMM 554
              S +++L +VV H G +  GHY+ Y       KWY+ DD+W T V+E+TVR  + Y++
Sbjct: 449 ---SMKYDLVSVVNHIGGISGGHYIAYALNDEDGKWYEFDDSWATAVSEDTVRNKEAYVL 505

Query: 555 FYVQKMLYYKASEKQ 569
           FY+++    +   KQ
Sbjct: 506 FYLRQSPEKEYERKQ 520


>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
          Length = 913

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 169/390 (43%), Gaps = 87/390 (22%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GL GL N+GNTCFMNSVLQ L +T PL  Y + D++N       N    C+   L   F+
Sbjct: 577 GLNGLRNIGNTCFMNSVLQCLSNTRPLLEYLVDDKYN----SDINTTLSCMKGALIKAFA 632

Query: 257 AIF-----CGDRMPYSPAKFLYSW-WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
           ++       GDR        L S   R A     Y QQDA EF   +L+G+HE V +   
Sbjct: 633 SVIKELWRSGDRDCVVNTTALKSQVQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTV 692

Query: 311 KPR------SQGNGDCCIAHR---------------VFSGILRSDVMCMACGFTSTTFDP 349
           KP+           D   A                 +F G L+S + C  C   S TFDP
Sbjct: 693 KPKPILTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKSTLRCTHCLHDSVTFDP 752

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
             D SL + P++  ++K                           L  CL  F R E L  
Sbjct: 753 FWDLSLPI-PSRTGNLK---------------------------LQQCLQHFVREEELDG 784

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDM 468
           D+K  C +C VR++ LK  ++ K P V   H+KRF  S   +   K+   ++FPLS LDM
Sbjct: 785 DEKPTCSKCGVRRKCLKWFTVHKFPQVLVLHLKRF--SPTERFRGKLSVVVEFPLSGLDM 842

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--L 526
           +P+ +S                          + + L+AV  H+G   +GHY  Y +   
Sbjct: 843 SPFAASPT-----------------------HATYNLYAVSNHSGTTYSGHYTAYCKHPY 879

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           +  W++ +D+ +T +    + +A+ Y++FY
Sbjct: 880 TGDWHEYNDSRVTPIRSRDIVSAEAYVLFY 909


>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
            niloticus]
          Length = 1082

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 185/405 (45%), Gaps = 84/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +A+ I +++ + G L   L GL NLGNTC+MNS+LQ L +TP L  YF    +N  Y + 
Sbjct: 731  SAAKIRNLNPTFGGLGASLTGLRNLGNTCYMNSILQCLCNTPALAEYF----NNNCYLED 786

Query: 240  KN-----GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             N     G +  +A +   +  A++ G     SP  F  +  +     A Y+QQD+ E  
Sbjct: 787  INRHNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINEQFAGYDQQDSQELL 846

Query: 295  ISMLDGIHEKVEKDQHKPR----------SQGNGDCC----------IAHRVFSGILRSD 334
            + ++DG+HE + K  ++ R           Q   D            I   +F G  +S 
Sbjct: 847  LFLMDGLHEDLNKADNRKRYKEEENDHLDDQTGADLAWSKHKLLNESIIVALFQGQFKST 906

Query: 335  VMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
            V C+ C   S TF+  +  SL L                           S+  C   +L
Sbjct: 907  VQCLTCHRKSRTFETFMYLSLPLA--------------------------STSKC---SL 937

Query: 395  MGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
              CL  F++ E+L  + K FC+ C+  ++S K++ I K+P +   H+KRF +    +  +
Sbjct: 938  QDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEG--RWKQ 995

Query: 455  KVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
            K+   + FPL +LD+A Y+         G +             +    + L+ V  H G
Sbjct: 996  KLQTSVDFPLDNLDLAQYV--------IGPK-------------QSLKRYNLYGVSNHYG 1034

Query: 514  KLDAGHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFY 556
             LD GHY  Y + + K  WYK DD  +++++ ++V+++  Y++FY
Sbjct: 1035 GLDGGHYTAYCKNAAKQRWYKFDDHEVSDISTSSVKSSAAYILFY 1079


>gi|16945891|gb|AAL32170.1|AF329945_1 ubiquitin-specific-protease-3-like protein [Takifugu rubripes]
          Length = 166

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 116/174 (66%), Gaps = 9/174 (5%)

Query: 392 STLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRK 451
           +TL  CL RFTRPE LGS  K  C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K
Sbjct: 1   TTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTLKKLPIVACFHLKRFEHSA--K 58

Query: 452 MSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTH 511
           + RK+  Y+ FPL LDM P+++SS   SR   ++      ++  +    +++ LFAVV H
Sbjct: 59  LRRKITTYVSFPLELDMTPFMASSK-ESRMNGQY-----QQTVEVLNNDNKYSLFAVVNH 112

Query: 512 TGKLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
            G L++GHY +++R   ++W+KCDDA IT+ +   V  ++GY++FY ++ L Y+
Sbjct: 113 QGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 166


>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
            caballus]
          Length = 1117

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 757  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 816

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 817  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 873

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 874  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 933

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 934  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 964

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 965  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1022

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1023 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1061

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  ++++  ++V+++  Y++FY 
Sbjct: 1062 LDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFYT 1106


>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
            8 [Papio anubis]
          Length = 1109

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 749  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 808

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 809  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 865

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 866  FLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA--LFQGQFKS 923

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 924  TVQCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---T 954

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 955  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1012

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+                 G ++N       ++ LF+V  H 
Sbjct: 1013 QKLQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHY 1051

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1052 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFYT 1098


>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
          Length = 442

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 64/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +TPPL NY  S  H  + C+    V  C+ C+L   F   +
Sbjct: 127 GLTNLGNTCFLNSVLQCLTYTPPLVNYLSSSEH-AHTCKQ---VGFCMVCELQRHFRRCY 182

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   L      A ++    Q+DAHEF   ++D + +       K   + + +
Sbjct: 183 ENGGQAIKPHAILQKIKLIAKHMHWGRQEDAHEFLRYVIDAMQKSCLNGNTK-LDRISKE 241

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + +++F G LRS V+C+ C   S T+DP +D S+D++                     
Sbjct: 242 TTVINQIFGGFLRSQVVCLKCKAKSNTYDPFLDISVDVK--------------------- 280

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      +  +    ++F +PE+L  D  + C +C+ +  + K+ +I K   V   
Sbjct: 281 ----------NVPNIQKAFEKFVQPEQLDLDNAYNCTKCKQKVAAQKRFTIHKPSNVLTI 330

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KR+       M  KV R++ FP  L++ PY+S S                        
Sbjct: 331 QLKRYG-----VMGGKVTRHISFPEKLNIRPYMSVS---------------------QGA 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYV 557
           +  ++L+AV+ H G   ++GHY  Y+R SN+ WY  +D+ + + ++  V  ++ YM+FY+
Sbjct: 365 AITYQLYAVLVHMGHSTNSGHYYCYVRSSNQAWYCMNDSMVQQTSQGRVLNSEAYMLFYI 424

Query: 558 Q 558
           +
Sbjct: 425 R 425


>gi|312384996|gb|EFR29593.1| hypothetical protein AND_01305 [Anopheles darlingi]
          Length = 625

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/285 (34%), Positives = 144/285 (50%), Gaps = 38/285 (13%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H   +    G + F  +  C        R A RR +     C  CG SS P+L++C+ 
Sbjct: 6   CVHFEAYLKEYGLESFSVVHACF--SACISREARRRKALSC-LCHKCG-SSGPQLFSCLH 61

Query: 83  CAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLA 142
           C    C      +H+  H  +T     H IA+++    L+C  C+D +Y R+        
Sbjct: 62  CIYFGCK----GAHIDEHYKQTK----HYIALELCYGMLYCYQCQDLIYHRE-------- 105

Query: 143 HTTSIIQSSKPENLRKR-----RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRG 197
                 Q     +LR+      + + +RPWSP   E  L++ N  P     ++   +  G
Sbjct: 106 -----CQVIAERHLRREAHCLNKSLSWRPWSPSQLEIELLLKN--PKRRHVTAFTSI--G 156

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLG+TCFMN ++QAL HTP LR+YFLS+ H    C + N  + CL C++  +F  
Sbjct: 157 LRGLLNLGSTCFMNCIVQALIHTPLLRDYFLSELHE---CTTTNAAK-CLVCEVSRLFQE 212

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
            + G+R P S  + L+  W HA +LA YEQQDAHEFFI+ LD +H
Sbjct: 213 FYSGERGPLSLHRLLHLIWNHARHLAGYEQQDAHEFFIATLDVLH 257



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 132/294 (44%), Gaps = 70/294 (23%)

Query: 299 DGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
           DG H   + D +  +       CI  ++F+G L+SDV+C AC   STT DP  D SLDL 
Sbjct: 361 DGAHRASQPDPNPAQCS-----CIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLG 415

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
            +                                +L+ CL+RFTR E LGS  K  C  C
Sbjct: 416 ESGTGGYGGPP----------------------KSLIDCLERFTRAEHLGSSAKIKCSSC 453

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS---- 474
              QES KQ+S+R LP+V+ FH+KRFEHSS  ++ +K+  ++ FP  LDM P++S     
Sbjct: 454 MSYQESTKQLSMRTLPIVASFHLKRFEHSS--QIDKKISTFISFPSELDMTPFMSQKKKM 511

Query: 475 -------------SILRSRFGN---RFFPFDGDESNT-----LNEPSSE----------- 502
                        S+  +  G    R  P     S +     +NE +             
Sbjct: 512 DPHHHHHHHQQNHSVASNGAGGATERGGPNAPGTSGSGTMEEVNEATRSSHHQTVTTSDT 571

Query: 503 ----FELFAVVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQG 551
               + L+AV+ H G LDAGHY  Y+R   + W KCDD  IT      V  ++G
Sbjct: 572 ADFRYSLYAVINHVGTLDAGHYTAYVRHQKDIWVKCDDHIITTATLKQVLDSEG 625


>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
           [Equus caballus]
          Length = 394

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 182/404 (45%), Gaps = 82/404 (20%)

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRYY 236
           AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR  
Sbjct: 35  ASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN 94

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
                G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  + 
Sbjct: 95  LLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLF 151

Query: 297 MLDGIHEKVEK-DQHKPRSQGNGDCC-------------------IAHRVFSGILRSDVM 336
           ++DG+HE + K D  K   + N D                     I   +F G  +S V 
Sbjct: 152 LMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQ 211

Query: 337 CMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
           C+ C   S TF+  +  SL L                           S+  C   TL  
Sbjct: 212 CLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQD 242

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K+
Sbjct: 243 CLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQKL 300

Query: 457 DRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL 515
              + FPL +LD++ Y+                 G ++N       ++ LF+V  H G L
Sbjct: 301 QTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGGL 339

Query: 516 DAGHYVTYLRLS--NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           D GHY  Y + +   +W+K DD  ++++  ++V+++  Y++FY 
Sbjct: 340 DGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFYT 383


>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
          Length = 1011

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 651  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 710

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 711  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 767

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 768  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 827

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 828  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 858

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 859  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 916

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 917  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 955

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  ++++  ++V+++  Y++FY 
Sbjct: 956  LDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFYT 1000


>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
          Length = 706

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 179/394 (45%), Gaps = 73/394 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL--DTMFSA 257
           GL NLGNTCF+N+VLQ L +TP L N+FL++ H ++   S     L    +L  +T+  +
Sbjct: 85  GLQNLGNTCFLNAVLQCLTYTPALANFFLNNEHQKHKNLSSGFNSLFEMGNLVKNTLIHS 144

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK----VEKDQHKPR 313
                 +P  P  F+ +    +       Q+D+HEF   +LD +H++       D     
Sbjct: 145 KNKHHAVP--PTAFVKNIRALSKTFKKGRQEDSHEFARCLLDSMHKRCCMLGRVDDGSSS 202

Query: 314 SQGNGDCCIAH---------------RVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
           +  NG    A+               RVF G LRS V C +CG  S   DPC+D SL+  
Sbjct: 203 NTRNGKKLTANAIDPESKEAETTFIWRVFGGQLRSCVTCQSCGRESAKLDPCMDMSLE-- 260

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
                              C            + +L   L  FTR E L  D K+ C+ C
Sbjct: 261 -------------------C----------AKVKSLEQALKLFTRVEVLDGDNKYRCEGC 291

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
           +    + KQ S+ K P V    +KRFE     +   K+ +++++PL LD+  YL +SIL+
Sbjct: 292 KKLSRAKKQFSVDKAPNVLQIQLKRFEFVPFGRG--KLSQFIEYPLVLDLTSYL-TSILK 348

Query: 479 SRFGNRFFPFDGDESNTL--------------NEPSSEFELFAVVTHTG-KLDAGHYVTY 523
              G R        +N +              +  SS ++L  V+ H G  +++GHY +Y
Sbjct: 349 INGGRRGKKRSKSANNAVLDDIMGGSSTEKAFSSSSSVYDLIGVLVHAGSSMNSGHYYSY 408

Query: 524 LRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
           ++  N  W++ DD  +T V+E TV   + Y++FY
Sbjct: 409 VKAQNGFWFEMDDESVTNVSEKTVLRQKAYLLFY 442


>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
          Length = 465

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 177/386 (45%), Gaps = 78/386 (20%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L +++ R    + + +R  L  +   + 
Sbjct: 124 QGLTGLGNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRD-LNNNSRMRTALMSEFAKLI 182

Query: 256 SAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
             ++        SP++F     R+A     Y QQDA EF   +LDG+H +V +   +PR+
Sbjct: 183 QLLWTSSPNHSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRA 242

Query: 315 ---------------------QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
                                Q   D  ++  +F   L+S + C  CG+ ST FDP  D 
Sbjct: 243 NADTLDHLPDDEKSRQMWRRYQEREDSRVSD-LFVAQLKSSLTCSECGYCSTAFDPFWDL 301

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SL + P +G                           G  TLM CL  FT+ + L  D+K 
Sbjct: 302 SLPI-PKKG--------------------------YGEVTLMDCLRLFTKEDVLDGDEKP 334

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYL 472
            C +C+ R    K+ SI+K P +   H+KRF  + +R  + K+  ++ FPL  LD+  + 
Sbjct: 335 TCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIR--ASKLTTFVNFPLKDLDLREFA 392

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKW 530
           S S                         + + L+AV  H+G    GHY  Y +  +S++W
Sbjct: 393 SQSC----------------------NHAVYNLYAVSNHSGATMGGHYTAYCKSPISSEW 430

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFY 556
           +  +D+ +T ++ + V  +  Y++FY
Sbjct: 431 HSFNDSRVTPMSSSHVPTSDAYLLFY 456


>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
           carolinensis]
          Length = 1283

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 173/381 (45%), Gaps = 69/381 (18%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P D +S     + R   GL NLGNTCF+NS LQ L +TPPL NY LS  H++  C  +  
Sbjct: 95  PADKISLKWQKMHRVGAGLQNLGNTCFLNSALQCLTYTPPLANYMLSHEHSKT-CHEQG- 152

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C + +  +           P   +    R A +     Q+DAHEF    +D + 
Sbjct: 153 --FCMMCTMQSHITQALSNSGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQ 210

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +      +K          I H++F G LRS V CM C   S TFDP +D +L++     
Sbjct: 211 KACLNGSNKLDRHTQATTFI-HQIFGGYLRSRVKCMNCKGVSDTFDPYLDITLEI----- 264

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                   KS  S N                    L++F +PE+L  +  + C +C+   
Sbjct: 265 --------KSAQSIN------------------KALEQFVKPEQLDGENAYKCSKCKKMV 298

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ ++ +   V    +KRF + S  K++++V    ++P  LD+ PY+S         
Sbjct: 299 PASKRFTVHRASNVLTLSLKRFANFSGGKITKEV----KYPEYLDIRPYMS--------- 345

Query: 483 NRFFPFDGDESNTLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAW 537
                          +P+ E   + L+AV+ HTG    AGHY  Y++ SN +WY+ +D+ 
Sbjct: 346 ---------------QPNGEPIIYALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDST 390

Query: 538 ITEVNENTVRAAQGYMMFYVQ 558
           ++  +  TV   Q Y++FY++
Sbjct: 391 VSNSDIRTVLNQQAYVLFYIR 411


>gi|326675880|ref|XP_693811.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Danio rerio]
          Length = 1067

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 179/393 (45%), Gaps = 96/393 (24%)

Query: 198  LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN------GVRLCLACDL 251
            L GL NLGNTC+MNS+LQ L +T  + +YF     NR Y Q         G +  +A + 
Sbjct: 734  LTGLRNLGNTCYMNSILQCLCNTVAMADYF-----NRNYYQDDINRANILGHKGEVAEEF 788

Query: 252  DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK---- 307
              +  A++ G     SP  F  +  +  S  +SYE QD+ E  + ++DG+HE + K    
Sbjct: 789  SVVMKALWLGQYKMISPLDFKGTICKINSRFSSYEHQDSQELLLFLMDGLHEDLNKADKR 848

Query: 308  ---------------------DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTT 346
                                  +HK   Q N    +A  +F G  +S V CM+C   S T
Sbjct: 849  RGYKEEEIEHLDDVSAADLAWSKHK---QLNESIIVA--LFQGQFKSTVQCMSCQHKSRT 903

Query: 347  FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            F+  +  +L+                          M +S  C   +L  CL  F + ER
Sbjct: 904  FETFMYLTLE--------------------------MTASSKC---SLQDCLKLFHKEER 934

Query: 407  LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-S 465
            L    +F+C+ C+  ++++K+M I KLP +   H+KRF++    +   K+   + FPL +
Sbjct: 935  LTDGNRFYCRHCKTHRDAIKRMQIWKLPPILLVHLKRFKYEG--RWREKLQTLVDFPLDN 992

Query: 466  LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
            LD++ Y+                 G ++N       ++ L+AV  H G +D GHY  Y +
Sbjct: 993  LDLSQYVI----------------GPKNNL-----KKYNLYAVSNHYGGMDGGHYTAYCK 1031

Query: 526  --LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
              +  +W+K DD  ++E++ +TVR+   Y+ FY
Sbjct: 1032 NPMKQRWFKFDDHEVSEISSSTVRSPAAYIFFY 1064


>gi|114598756|ref|XP_001139436.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Pan
           troglodytes]
          Length = 530

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 166/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF +  +D + EK     HK     + D
Sbjct: 133 --TRALHIPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-EKACLPGHKQVEHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
 gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
          Length = 1063

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 178/401 (44%), Gaps = 77/401 (19%)

Query: 181  ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
            AS I S++   G     L GL NLGNTC+MNS+LQ L +TP L  YF  + +     +S 
Sbjct: 705  ASKIRSLNPVFGGAGPALTGLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSN 764

Query: 241  N-GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
              G +  +A +   +  A++ G     SP  F  +  +     A Y  QD+ E  + ++D
Sbjct: 765  LLGHKGEVAEEFGCIMKALWTGQYKCISPKDFKITIGKINEQFAGYSHQDSQELLLFLMD 824

Query: 300  GIHE-----------KVEKDQHKPRSQGNGDCCIAHR---------VFSGILRSDVMCMA 339
            G+HE           K E + H   SQ        H+         +F G  +S V C+ 
Sbjct: 825  GLHEDLNKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVSLFQGQFKSTVQCLT 884

Query: 340  CGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLD 399
            C   S TF+  +  SL L                           S+  C   +L  C+ 
Sbjct: 885  CQKKSRTFEAFMYLSLPLP--------------------------STSKC---SLKDCIK 915

Query: 400  RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRY 459
             F + E+L    +F C  C+ ++ + K++ I KLP +   H+KRF      +  +K+  Y
Sbjct: 916  AFAKEEKLTDSNRFDCSNCKTQRVATKKIEIWKLPPILLVHLKRFSFEG--RWRQKLQAY 973

Query: 460  LQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAG 518
            + FPL SLD++PY+                 G +S      S ++ LF V  H G LD G
Sbjct: 974  VDFPLESLDLSPYVI----------------GPKS------SKKYNLFGVSNHYGGLDGG 1011

Query: 519  HYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            HY  Y +  L  +W+K DD  +++++ ++V+ +  YM+FY 
Sbjct: 1012 HYTAYCKNALKQRWFKFDDHDVSDISVSSVKTSAAYMLFYT 1052


>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
          Length = 587

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 191/417 (45%), Gaps = 83/417 (19%)

Query: 170 DLRER-----SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR 224
           +LR R     SL+V+    +    + +  + +GL GL NLGNTCFMNS+LQ L +T  LR
Sbjct: 12  ELRPRTSMPGSLLVSTFVGLVLNKTKSSKVVQGLTGLRNLGNTCFMNSILQCLSNTKELR 71

Query: 225 NYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLA 283
           +Y L +++ R    + + +R  L  +   +   ++        SP++F     R+A    
Sbjct: 72  DYCLQNQYLRD-LNNNSRMRTPLMSEFAKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFV 130

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRS---------------------QGNGDCCI 322
            Y QQDA EF   +LDG+H +V +   +PR+                     Q   D  +
Sbjct: 131 GYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANADTLDHLPDDEKSRQMWRRYQEREDSRV 190

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
           +  +F G L+S + C  CG+ ST FDP  D SL + P +G                    
Sbjct: 191 SD-LFVGQLKSSLTCSECGYCSTAFDPFWDLSLPI-PKKGY------------------- 229

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
                  G  TLM CL  FT+ + L  D+K  C +C+ R    K+ SI+K P +   H+K
Sbjct: 230 -------GEVTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLK 282

Query: 443 RFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           RF  + +R  + K+  ++ FPL  LD+  + S S                         +
Sbjct: 283 RFSEARIR--ASKLTTFVNFPLKDLDLREFASQSCNH----------------------A 318

Query: 502 EFELFAVVTHTGKLDAGHYVTYLRLSN--KWYKCDDAWITEVNENTVRAAQGYMMFY 556
            + L+AV  H+G    GHY  Y +  +  +W+  +D+ +T ++ + VR++  Y++FY
Sbjct: 319 VYNLYAVANHSGTTMGGHYTAYCKEPHLQEWHSFNDSRVTPMSSSHVRSSDAYLLFY 375


>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
          Length = 1080

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 169/361 (46%), Gaps = 64/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTCF+NS LQ L +TPPL N+ LS  H++  CQ       C+ C +      +F
Sbjct: 114 GLQNMGNTCFLNSALQCLTYTPPLANHMLSREHSK-TCQEPG---FCMMCTMQNHIIQVF 169

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   L    R A +     Q+DAHEF    +D + +         R      
Sbjct: 170 ANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQ--TQA 227

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
               H+VF G LRS V C++C   S TFDP +D +L+++      M  S +K+       
Sbjct: 228 TTFIHQVFGGYLRSRVKCLSCKAVSDTFDPFLDITLEIK------MAPSVSKA------- 274

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                             L++F +PE+L  +  + C +C+    + K+ +I + P V   
Sbjct: 275 ------------------LEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSPNVLTL 316

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P SLD+ P++S S              G+  N     
Sbjct: 317 SLKRFANFTGGKITKDV----KYPESLDLRPFMSQS-------------QGEPQN----- 354

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ ++  +  +V   Q Y++FY+
Sbjct: 355 ---YGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYI 411

Query: 558 Q 558
           +
Sbjct: 412 K 412


>gi|426358757|ref|XP_004046661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
           gorilla gorilla]
          Length = 530

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 166/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  Y P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALYRPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS++ C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSEIKCLHCHGMSDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  +  + K +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCALCLQKAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ HTG     GHY +Y++    +WYK DDA +T     +  + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHTGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|378925634|ref|NP_001243783.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 11 [Homo
           sapiens]
 gi|449061954|sp|C9JVI0.1|U17LB_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           11
          Length = 530

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 168/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S +                     N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQT---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|378925638|ref|NP_001243786.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 17 [Homo
           sapiens]
 gi|449061957|sp|D6RBQ6.1|U17LH_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           17
          Length = 530

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|379030599|ref|NP_001243788.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 18 [Homo
           sapiens]
 gi|449061958|sp|D6R9N7.1|U17LI_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           18
          Length = 530

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 168/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S +                     N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQT---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|378925636|ref|NP_001243784.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 13 [Homo
           sapiens]
 gi|449061955|sp|C9JLJ4.1|U17LD_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           13
          Length = 530

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHPSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|379030602|ref|NP_001243789.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 19 [Homo
           sapiens]
 gi|449061959|sp|D6RCP7.1|U17LJ_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           19
          Length = 530

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 168/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S +                     N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQT---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|33333160|gb|AAQ11741.1| deubiquitinating enzyme DUB1 [Homo sapiens]
          Length = 530

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRASASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|195352188|ref|XP_002042596.1| GM14932 [Drosophila sechellia]
 gi|194124480|gb|EDW46523.1| GM14932 [Drosophila sechellia]
          Length = 192

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 127/238 (53%), Gaps = 49/238 (20%)

Query: 330 ILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNC 389
           +L+SDV+C AC   STT+DP  D SLDL                           ++ + 
Sbjct: 1   MLQSDVVCQACNGVSTTYDPFWDISLDLG-------------------------ETTTHG 35

Query: 390 GIS--TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
           G++  TL+ CL+R+TR E LGS  K  C  C+  QES KQ S+R LP V  FH+KRFEHS
Sbjct: 36  GVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHS 95

Query: 448 SVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFA 507
           ++  + RK+  ++QFP+  DM P++S    ++ +G+                   F L+A
Sbjct: 96  AL--IDRKISSFIQFPVEFDMTPFMSEK--KNAYGDF-----------------RFSLYA 134

Query: 508 VVTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           VV H G +D GHY  Y+R   + W KCDD  IT  +   V  ++GY++FY + +L Y+
Sbjct: 135 VVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 192


>gi|379030610|ref|NP_001243792.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 22 [Homo
           sapiens]
 gi|449061962|sp|D6RA61.1|U17LM_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           22
          Length = 530

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 2-like, partial [Anolis carolinensis]
          Length = 666

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 178/387 (45%), Gaps = 79/387 (20%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L +++ R    + + +++ L  +   + 
Sbjct: 324 QGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRD-LNNNSRMQMNLMAEFAKLI 382

Query: 256 SAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
            A++        SP++F     R+A     Y QQDA EF   +LDG+H +V +   +P+ 
Sbjct: 383 QALWTSSPNESVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRILVRPKG 442

Query: 315 QGNGDCC----------------IAHR------VFSGILRSDVMCMACGFTSTTFDPCVD 352
            G+ D                  +A        +F G L+S + C  CG  ST FDP  D
Sbjct: 443 -GSSDSLDHLPDEEKGRQMWMRYLAREDSRIGDLFVGQLKSSLTCSVCGHCSTAFDPFWD 501

Query: 353 FSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQK 412
            SL +                           + ++ G   L  CL  FT+ + L  D+K
Sbjct: 502 LSLPI---------------------------AKKSYGEVNLADCLRLFTKEDILDGDEK 534

Query: 413 FFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPY 471
             C  C+ R +  K+ SI++ P +   H+KRF  + +R  S K+  ++ FPL  LD+  +
Sbjct: 535 PTCCHCKARTKCTKKFSIQRFPKILVLHLKRFSEARIR--SSKLTTFVNFPLKDLDLREF 592

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNK 529
            S S                         + + L+AV  H+G    GHY  Y +  +S +
Sbjct: 593 ASQSCNH----------------------AVYNLYAVSNHSGTTMGGHYTAYCKNPVSGE 630

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFY 556
           W+  +D+ +T ++ + VR++  Y++FY
Sbjct: 631 WHAFNDSRVTPLSASHVRSSDAYLLFY 657


>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
           [Oreochromis niloticus]
          Length = 403

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 189/414 (45%), Gaps = 91/414 (21%)

Query: 174 RSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL----- 228
           RS++V+    +    + N  L +GL GL NLGNTCFMNS+LQ L +T  LR+Y L     
Sbjct: 35  RSVLVSTFMGLIINQAKNKSL-QGLVGLRNLGNTCFMNSILQCLSNTLELRDYCLRNCHI 93

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           +D +N   C+S   +    A    +++++    +  P SP++F     R A       QQ
Sbjct: 94  TDLNNN--CRSNTALIEEFAKLTQSLWTS---ANNEPISPSEFRNQVQRCAPKFVGCNQQ 148

Query: 289 DAHEFFISMLDGIHEKVEK----------------DQHKPRSQGN-----GDCCIAHRVF 327
           DA EF   +LDG+H +V +                D  K R   N      D  +   +F
Sbjct: 149 DAQEFLRFLLDGLHNEVNRVTVRPKVSVLDFDHLADDEKGRRMWNMYLAREDSKVVD-LF 207

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            G L+S + C ACGF ST FDP  D S+ +                           + +
Sbjct: 208 VGQLKSSLTCTACGFRSTVFDPFWDLSIPI---------------------------AQK 240

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
             G  TL  CL  FT+ + L  +++  C +C+ R++  K+ SI+K P +   H+KRF  S
Sbjct: 241 ISGEVTLKDCLRLFTKEDVLDGEERPTCTKCKARRKCTKRFSIQKFPQILVLHLKRFSDS 300

Query: 448 SVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE--FE 504
           +VR  + K+  Y+ FPL  LD+  + S                        EPS    + 
Sbjct: 301 NVR--ASKLSTYVNFPLKDLDLREFAS------------------------EPSERPVYN 334

Query: 505 LFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           L+AV  H+G    GHY  Y +     +WY  +D+ ++ ++ + VR++  Y++FY
Sbjct: 335 LYAVSNHSGNALGGHYTAYCKNPALGEWYSYNDSRVSPMSSSQVRSSNAYVLFY 388


>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
           intestinalis]
          Length = 768

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 164/359 (45%), Gaps = 59/359 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NS LQ L +TPPL NY +S++H R  C+  NG + C+ C L    SA F
Sbjct: 108 GLVNLGNTCFLNSALQCLTYTPPLANYLMSNQH-RAQCRV-NG-QFCMLCSLQHHQSASF 164

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   L +    A +L    Q+DAHEF    +D +                  
Sbjct: 165 GNGGKSIRPMNILKNLRIIAKHLQFGRQEDAHEFIRYSVDAMQRSCLFGLPSKLDIHTKT 224

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + +++F G LRS V C  C   S TFDP +D SLD+   + + ++             
Sbjct: 225 TTLVYQIFGGYLRSRVKCRQCRAVSDTFDPFLDLSLDINKQESNDLRK------------ 272

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                            CL+ F +PE L  D  + C QC+    + K  SI + P V   
Sbjct: 273 -----------------CLENFVKPELLHGDNLYKCYQCKKSVPASKTFSIHRPPNVLTV 315

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF  SS   M  K++R + +P  L++ PY SS              D +E       
Sbjct: 316 QLKRF--SSF--MGNKINRDITYPSKLNLGPYTSS--------------DRNEGPI---- 353

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++L+AV+ H+G   ++GHY  Y + +N +WY  +D+ + +V+ +     Q Y++FY
Sbjct: 354 ---YDLYAVLVHSGFSCNSGHYYAYAKAANGQWYCFNDSSVNQVSSHQALNQQAYLLFY 409


>gi|187663985|sp|Q6QN14.2|U17L6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           6; AltName: Full=Deubiquitinating enzyme 17-like protein
           6; AltName: Full=Ubiquitin thioesterase 17-like protein
           6; AltName: Full=Ubiquitin-specific-processing protease
           17-like protein 6
          Length = 398

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
           sapiens]
 gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           20
          Length = 530

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQP---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
           sapiens]
 gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           5; AltName: Full=Deubiquitinating enzyme 17-like protein
           5; AltName: Full=Ubiquitin thioesterase 17-like protein
           5; AltName: Full=Ubiquitin-specific-processing protease
           17-like protein 5
          Length = 530

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLAKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQP---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|334191675|ref|NP_001229255.1| ubiquitin specific peptidase 17-like family member 25 [Homo
           sapiens]
 gi|334191677|ref|NP_001229257.1| ubiquitin specific peptidase 17-like family member 26 [Homo
           sapiens]
 gi|334191681|ref|NP_001229259.1| ubiquitin specific peptidase 17-like family member 27 [Homo
           sapiens]
 gi|334191683|ref|NP_001229260.1| ubiquitin specific peptidase 17-like family member 28 [Homo
           sapiens]
 gi|334191685|ref|NP_001229261.1| ubiquitin specific peptidase 17-like family member 29 [Homo
           sapiens]
 gi|337756779|ref|NP_001229256.1| ubiquitin specific peptidase 17-like family member 24 [Homo
           sapiens]
 gi|379030622|ref|NP_001243796.1| ubiquitin specific peptidase 17-like family member 30 [Homo
           sapiens]
 gi|187663978|sp|Q0WX57.2|U17LO_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           24; AltName: Full=Deubiquitinating enzyme 17; AltName:
           Full=Ubiquitin thioesterase 17; AltName:
           Full=Ubiquitin-specific-processing protease 17
          Length = 530

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQP---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|344257262|gb|EGW13366.1| Ubiquitin carboxyl-terminal hydrolase 27 [Cricetulus griseus]
          Length = 176

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 11/174 (6%)

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
           GI+TL  CL RFTRPE LGS  K  C  CQ  QES KQ++++KLP+V+CFH KRFEHS+ 
Sbjct: 9   GITTLTDCLQRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAK 68

Query: 450 RKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD-GDESNTLNEPSSEFELFAV 508
           ++  RK+  Y+ F L LDM P+++SS      G    P + G+  N       ++ LFA 
Sbjct: 69  KR--RKITTYISFTLELDMTPFMASSKQTRMNGQLQLPTNSGNNEN-------KYSLFAG 119

Query: 509 VTHTGKLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           V H G L++GHY +++R   ++W+KCDDA I + +   V  ++GY++FY +++L
Sbjct: 120 VNHQGTLESGHYTSFIRHHRDQWFKCDDAVIIKASIKDVLNSEGYLLFYHKQVL 173


>gi|301620627|ref|XP_002939670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Xenopus
            (Silurana) tropicalis]
          Length = 1059

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 174/406 (42%), Gaps = 86/406 (21%)

Query: 181  ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
            AS I S++   G     L GL NLGNTC+MNS+LQ L +TP L  YF    +N +Y    
Sbjct: 700  ASKIRSLNPVFGGAGPALTGLRNLGNTCYMNSILQCLCNTPHLIEYF----NNNFYQAHI 755

Query: 241  NGVRLC-----LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
            N   L      +A +   +  A++ G     SP  F  +  +     A Y  QD+ E  +
Sbjct: 756  NRSNLLGHKGEVAEEFGCIMRALWTGQYKYISPKDFKITIGKINEQFAGYTHQDSQELLL 815

Query: 296  SMLDGIHE------------KVEKDQHKPRSQGNGDCCIAHR---------VFSGILRSD 334
             ++DG+HE            K E + H   SQ        H+         +F G  +S 
Sbjct: 816  FLMDGLHEDLNKKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVALFQGQFKST 875

Query: 335  VMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
            V C+ C   S TF+  +  SL L                           S+  C   +L
Sbjct: 876  VQCLTCQKKSRTFEAFMYLSLPLP--------------------------STSKC---SL 906

Query: 395  MGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
              C+  F + E+L    +F C  C+ ++ + K++ I KLP +   H+KRF      +  +
Sbjct: 907  QDCIKAFAKEEKLTDSNRFDCSNCKTQRVATKKIEIWKLPPILLVHLKRFSFEG--RWRQ 964

Query: 455  KVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
            K+  Y+ FPL SLD++ Y+         G +                  + LF V  H G
Sbjct: 965  KLQSYVDFPLESLDLSQYV--------IGPKNV--------------KTYNLFGVSNHYG 1002

Query: 514  KLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
             LD GHY  Y +  L  +W+K DD  ++E++ ++V+ +  YM+FY 
Sbjct: 1003 GLDGGHYTAYCKNALKQRWFKFDDHDVSEISVSSVKTSAAYMLFYT 1048


>gi|156359561|ref|XP_001624836.1| predicted protein [Nematostella vectensis]
 gi|156211638|gb|EDO32736.1| predicted protein [Nematostella vectensis]
          Length = 406

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 201/450 (44%), Gaps = 85/450 (18%)

Query: 134 DFDAAVVLAHTTSIIQ------SSKPENLRKRRRIDYRPWSPDL---RERSLMVNNAS-- 182
           D D+ +V +    ++Q      +SKP+   ++ +  Y+P +      + +S ++ N    
Sbjct: 2   DLDSKLVTSSKQVLLQRIEFKPASKPDEQYEKLKQKYKPLNSGSNYGQIKSNLLTNGKVD 61

Query: 183 -------------PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLS 229
                        PID +++    + R   GL+NLGNTCF+NSV+Q L +T PL NY  +
Sbjct: 62  ASDSIPSPKFVLYPIDKINTQWTRVRRMGPGLSNLGNTCFLNSVVQVLTYTAPLVNYLAT 121

Query: 230 DRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR-MPYSPAKFLYSWWRHASNLASYEQQ 288
             H R  CQ    V  C+ C+L       F   +     P   +      A +L    Q+
Sbjct: 122 QEHTRE-CQM---VGFCMMCELQRHILRTFNHQQNESIKPLCIIQRLRSIAKHLRFGHQE 177

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
           DAHEF   ++DG+ +     Q +   + + +  I H +F G  RS V C+ C  TS TFD
Sbjct: 178 DAHEFLRYVIDGMQKSCLAGQPEKMDRYSKETTIVHGIFGGYYRSQVQCLKCHNTSNTFD 237

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P ++  +D++               HS                 +++  + R  + E L 
Sbjct: 238 PLMEIMVDIK---------------HS----------------PSVVRAIQRMCKAELLD 266

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
            D  + C +C+ +  + KQ+ I + P +    +KRF++  +     KV + + +   LD+
Sbjct: 267 GDNLYQCPRCKKKVPAHKQVLIHRPPNILTIQLKRFDYHHM--FGGKVSKEITYTEHLDL 324

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS 527
            P++++                        P  +++L+ V+ H+G   ++GHY  Y+R S
Sbjct: 325 RPFMTNP---------------------KGPPLKYKLYGVLVHSGYSCNSGHYYCYVRGS 363

Query: 528 NK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
           N  WY  +D+ + +V  NTV A Q Y++FY
Sbjct: 364 NDCWYNMNDSMVRQVGLNTVLAQQAYLLFY 393


>gi|45386059|gb|AAS59847.1| deubiquitinating enzyme DUB4 [Homo sapiens]
          Length = 398

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 166/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V   Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLTQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|11993486|gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
          Length = 859

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 63/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL     +  H +Y C        C  C +        
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKY-CHVAG---FCALCAIQKHVRTAR 163

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
             +    +P   + +    + N  +  Q+DAHE+ I++L+ +H+          S     
Sbjct: 164 QANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYR 223

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S  FDP +D SLD+                     +
Sbjct: 224 RSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI--------------------SK 263

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFF-CQQCQVRQESLKQMSIRKLPLVSC 438
           AD           +L   L RFT  E L +  K + C++C+ + ++ KQ+++ K P V  
Sbjct: 264 AD-----------SLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLT 312

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRFE     K+ RKVD    F  ++DM P++S             P +G+       
Sbjct: 313 VHLKRFEAHRSEKIDRKVD----FTSAIDMKPFVSG------------PHEGN------- 349

Query: 499 PSSEFELFAVVTHTGKLD-AGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G+   +GHY  ++R S+  WY  DD  + +V+E TV   + YM+FY
Sbjct: 350 --LKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407

Query: 557 VQ 558
           V+
Sbjct: 408 VR 409


>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
 gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
          Length = 634

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 196/439 (44%), Gaps = 83/439 (18%)

Query: 168 SPDLRERSLMV-NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNY 226
           S  LR R   + N+++  +  +++     R + GL NLGNTCFMNSVLQ+L +      Y
Sbjct: 200 SRKLRPRKRTISNDSNSENGATTAKRKSQRRVVGLRNLGNTCFMNSVLQSLSNIQEFSCY 259

Query: 227 F-----LSDRHNRYYCQSKNGVRLCLACDLDTMF------------SAIFCGDRMPYSPA 269
           F     L  +H +    S++     +   +D +F            S    G +   SP 
Sbjct: 260 FNTMPALEMKHKQKAYHSRS-----MKETMDDVFVVEELRKVLLNLSQGGDGSKSAISPE 314

Query: 270 KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK-----DQHKPRS---------- 314
                 W+       + Q DAHEF   MLD +H ++++     +   P+S          
Sbjct: 315 CLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTELQQVSFPVELGGPKSGEHKNPYNVS 374

Query: 315 -----QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
                Q  G   I   VF G+L+S+V C+ CG  S   DP +D SLD+ P +  S +   
Sbjct: 375 GLSHLQAKGRNSIVTNVFGGVLQSEVRCLICGMESKKHDPFLDLSLDI-PEKYYSKEHG- 432

Query: 370 TKSNHSCNCEADGMNSSQN-------CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                     ADG N +         C IS    CL  FT  E L   + ++C  C+ +Q
Sbjct: 433 ----------ADGTNGADGGGGAAPVCHIS---DCLSSFTEVEELAETELYYCNSCKCKQ 479

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRF 481
           +S K+  IR+LP V C HIKRF  ++  +   K+D  + FP+ +LDM+            
Sbjct: 480 KSTKRFWIRRLPNVLCLHIKRFRWNNFYRT--KIDLRIAFPINALDMS------------ 525

Query: 482 GNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDA-GHYVTYLRLSNKWYKCDDAWITE 540
             +F   +G E+   N   + ++L AV+ H G   + GHY ++   +  W   +D  + E
Sbjct: 526 --QFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYTSFAINNGVWMHFNDHTVKE 583

Query: 541 VNENTVRAAQGYMMFYVQK 559
           V+   V   + Y++FY+++
Sbjct: 584 VSSTAVAECKPYILFYIKR 602


>gi|260801769|ref|XP_002595768.1| hypothetical protein BRAFLDRAFT_117567 [Branchiostoma floridae]
 gi|229281015|gb|EEN51780.1| hypothetical protein BRAFLDRAFT_117567 [Branchiostoma floridae]
          Length = 289

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 75/333 (22%)

Query: 233 NRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHE 292
           N  YC+S    RL             + G R P+ P K L+  W HA +LA YEQQDA  
Sbjct: 31  NFVYCRSPRARRL-----------KFYSGCRSPHVPFKLLHLVWTHARHLAGYEQQDA-- 77

Query: 293 FFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVD 352
                                          H  F   L  DV+   C   +       D
Sbjct: 78  -------------------------------HEFFIAAL--DVLHRHCKGDT-------D 97

Query: 353 FSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQK 412
           +S    P              H CNC  D + +       T   CL  FTRPE LGS  K
Sbjct: 98  YSNHHNP--------------HHCNCIIDQVFTGGLQSDVTCQACL--FTRPEHLGSSAK 141

Query: 413 FFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYL 472
             C  C   QES KQ++++KLP+V+CFH+KRFEHS+  K  RK+  ++ FP+ LD+ P++
Sbjct: 142 IKCSHCHSYQESTKQLTMKKLPVVACFHLKRFEHST--KFRRKISTFVSFPVELDLTPFM 199

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWY 531
           +    R    + F    G+   T     + + LFAVV H G +D+GHY  ++R   ++W+
Sbjct: 200 AH---RRNGLDTFSISPGEMCPTPASNENRYSLFAVVNHRGSIDSGHYTCFIRQHRDQWF 256

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQKMLYYK 564
           +C+D  IT+     V  ++GY++FY ++++ Y+
Sbjct: 257 RCEDDIITKATVADVVNSEGYLLFYHKQLVEYE 289


>gi|449268039|gb|EMC78912.1| Ubiquitin carboxyl-terminal hydrolase 8 [Columba livia]
          Length = 1110

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 184/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 750  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRS 809

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 810  NFLGHKGE---VAEEFGVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLL 866

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 867  FLMDGLHEDLNKADNRKRYKEENNDHLDDLRAAELAWHKHKQLNESIIVALFQGQFKSTV 926

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 927  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 957

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 958  ECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1015

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N        + LF+V  H G 
Sbjct: 1016 LQTSVDFPLETLDLSQYVI----------------GPKNNL-----KRYNLFSVSNHYGG 1054

Query: 515  LDAGHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y + ++K  W+K DD  ++E++ ++V+++  Y++FY 
Sbjct: 1055 LDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYT 1099


>gi|18424054|ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
 gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
           Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
           Full=Ubiquitin thioesterase 23; AltName:
           Full=Ubiquitin-specific-processing protease 23
 gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
          Length = 859

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 63/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL     +  H +Y C        C  C +        
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKY-CHVAG---FCALCAIQKHVRTAR 163

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
             +    +P   + +    + N  +  Q+DAHE+ I++L+ +H+          S     
Sbjct: 164 QANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYR 223

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S  FDP +D SLD+                     +
Sbjct: 224 RSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI--------------------SK 263

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFF-CQQCQVRQESLKQMSIRKLPLVSC 438
           AD           +L   L RFT  E L +  K + C++C+ + ++ KQ+++ K P V  
Sbjct: 264 AD-----------SLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLT 312

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRFE     K+ RKVD    F  ++DM P++S             P +G+       
Sbjct: 313 VHLKRFEAHRSEKIDRKVD----FTSAIDMKPFVSG------------PHEGN------- 349

Query: 499 PSSEFELFAVVTHTGKLD-AGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G+   +GHY  ++R S+  WY  DD  + +V+E TV   + YM+FY
Sbjct: 350 --LKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407

Query: 557 VQ 558
           V+
Sbjct: 408 VR 409


>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
          Length = 933

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 168/361 (46%), Gaps = 59/361 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL  Y  S +H      S +    C  C +    S   
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQ----NSCHVAGFCALCAIQKHVSRAL 157

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P   + +    + N  +  Q+DAHE+ +++L+ +H+          S    +
Sbjct: 158 QSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPLGLPSESPSAYE 217

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V CM C F S  FDP +D SLD+                     +
Sbjct: 218 KSLVHKIFGGRLRSQVKCMQCSFCSNKFDPFLDLSLDI--------------------VK 257

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           AD           ++      FT PE L G ++++ CQQC+ + ++LKQ ++ K P V  
Sbjct: 258 AD-----------SIYKAFKNFTTPELLDGGERQYQCQQCKQKVKALKQFTVHKAPYVLT 306

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF+  +   +  K+ + + F  +LD+AP++S S             DGD   TL  
Sbjct: 307 IHLKRFQSYN---LEEKIHKKIHFGPTLDLAPFVSGSYA-----------DGDLKYTL-- 350

Query: 499 PSSEFELFAVVTHTGKLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYV 557
                    +V H G   +GHY  Y+R S+  WY  DD  ++ V + TV   Q YM+FYV
Sbjct: 351 ------YGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFYV 404

Query: 558 Q 558
           +
Sbjct: 405 R 405


>gi|379030606|ref|NP_001243791.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 21 [Homo
           sapiens]
 gi|449061961|sp|D6R901.1|U17LL_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           21
          Length = 530

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQP---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
           [Oreochromis niloticus]
          Length = 394

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 188/409 (45%), Gaps = 83/409 (20%)

Query: 175 SLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           S++V+    +    + N    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L + H R
Sbjct: 34  SVLVSTFVGLIINQAKNSKSAQGLVGLKNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRR 93

Query: 235 YY---CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAH 291
                 ++   +    A  + TM+++         SP++F     R+A     Y QQDA 
Sbjct: 94  DLNNNSRTNTALMEEFAKLIQTMWTSS---SSEAVSPSEFKTQIQRYAPRFVGYNQQDAQ 150

Query: 292 EFFISMLDGIHEKVEKDQHKPRS----------QGNG-----------DCCIAHRVFSGI 330
           EF   +LDG+H +V +   +PR           +  G           D  I   +F G 
Sbjct: 151 EFLRFLLDGLHNEVNRVTVRPRGTVEDFDHLPDEEKGKKMWSKYLEREDSKIVD-LFVGQ 209

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
           L+S + C  CGF ST FDP  D SL +                           + +  G
Sbjct: 210 LKSSLTCSHCGFCSTVFDPFWDLSLPI---------------------------AKKGYG 242

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
             +LM C+  FT+ + L  D+K  C +C+ R+   K+ +I+K P +   H+KRF  S  R
Sbjct: 243 EVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFTIQKFPKILVLHLKRF--SEAR 300

Query: 451 KMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
           + S K+  ++ FP+  LD+  + S                    N++N   + + L+AV 
Sbjct: 301 RTS-KLSTFVNFPMKDLDLREFAS-------------------ENSIN---AVYNLYAVS 337

Query: 510 THTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            H+G    GHY  Y R   S +WY  +D+ +T ++ + VR++  Y++FY
Sbjct: 338 NHSGTTMGGHYTAYCRNPSSGEWYTFNDSRVTPMSSSQVRSSDAYVLFY 386


>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
           rerio]
 gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
           rerio]
          Length = 398

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 191/421 (45%), Gaps = 84/421 (19%)

Query: 163 DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPP 222
           D R  SP +  RS++V+    +    + N    +GL GL NLGNTCFMNS+LQ L +T  
Sbjct: 27  DMRRKSPTM-SRSMLVSTFVGLLINQAKNSKNAQGLVGLRNLGNTCFMNSILQCLSNTHD 85

Query: 223 LRNYFLSDRHNRYY---CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
           LR+Y L + H       C++K  +    A    T++++         SP+ F     ++A
Sbjct: 86  LRDYCLRNTHRTDLNNNCRAKAALMDEFAKLTQTIWTS---ASNEAISPSDFKMQIQKYA 142

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS------------QG---------NG 318
                Y QQDA EF   +LDG+H +V +   K R+            +G         + 
Sbjct: 143 PRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVKSRAPVEDLDHLSEDEKGKRMWNKYLESE 202

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D  +   +F G L+S + C  CGF ST FDP  D SL +        KTS          
Sbjct: 203 DSKVVD-LFVGQLKSSLTCSECGFCSTVFDPFWDLSLPIA-------KTS---------- 244

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                      G  +L  CL  FT+ + L  +++  C +C+ R++  K+ +I+K P +  
Sbjct: 245 -----------GEVSLNDCLRLFTKEDVLDGNERPTCHRCKTRRKCTKKFTIQKFPKILV 293

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
            H+KRF    VR  + K+  ++ FPL  LD+  + S                       N
Sbjct: 294 LHLKRFSECRVR--TSKLSTFVNFPLKELDLREFASD----------------------N 329

Query: 498 EPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMF 555
             ++ + L+AV  HTG    GHY  Y R   + +WY  +D+ ++ ++ + V ++  Y++F
Sbjct: 330 SVNAVYNLYAVSNHTGTSLGGHYTAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLF 389

Query: 556 Y 556
           Y
Sbjct: 390 Y 390


>gi|378925632|ref|NP_001243782.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 12 [Homo
           sapiens]
 gi|449061964|sp|C9JPN9.1|UL17C_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           12
          Length = 530

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQP---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|33333162|gb|AAQ11742.1| deubiquitinating enzyme DUB2 [Homo sapiens]
          Length = 530

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 165/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +   V   Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITPVLTQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|37778800|gb|AAO38845.1| deubiquitinating enzyme 3 [Homo sapiens]
          Length = 530

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKIAKNV----QYPECLDMQPYMSQP---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSIISVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|328766417|gb|EGF76471.1| hypothetical protein BATDEDRAFT_28405 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 525

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 181/390 (46%), Gaps = 77/390 (19%)

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ 238
           N   P+DS+S S         GL N+GNTCF+NSVLQ + +TPPL  + L   H+   C+
Sbjct: 70  NKRIPMDSLSCSWSTAKHIGPGLVNMGNTCFLNSVLQCMTYTPPLAEFLLRGVHSSS-CR 128

Query: 239 SKNGVRLCLACDLDTMFS-AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
           +K+    C  C +++     +      P  P  F+ +  + + ++    Q+DAHEF   +
Sbjct: 129 TKS---FCAMCVMESHVKHCLQTSSEKPIQPRLFVENLRKISRHIRLGRQEDAHEFTRFL 185

Query: 298 LDGIHEKVEKDQHKPRSQGNGD----CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
           ++G+              G GD      +AH +FSG L+S + C+ C  TS T DP +D 
Sbjct: 186 IEGL------------KNGEGDRTPEATLAHAIFSGKLQSQITCLKCKSTSNTLDPLMDI 233

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SLD+                             Q C  +++   L RFT  E L    ++
Sbjct: 234 SLDI-----------------------------QKC--ASVEDALARFTTSELLHKQNQY 262

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLS 473
            C +C   +++ KQ+++ + P+V    +KRF      ++  K+   + F   L++ P++S
Sbjct: 263 RCSKCNALRDAYKQITVLEPPVVLTVQLKRFGFG--HRVGSKISSPVLFKTVLNLYPFMS 320

Query: 474 SSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WY 531
            S                + N L      + LFAV+ H+G    +GHY  +++  +  WY
Sbjct: 321 QS---------------TKQNVL------YHLFAVLVHSGGSCHSGHYYCFVKAPDGCWY 359

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQKML 561
             +D+ + +V+E TV A   YM+FYV++ L
Sbjct: 360 LMNDSLVQQVSEKTVLAQSAYMLFYVRQSL 389


>gi|363737748|ref|XP_413830.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Gallus
            gallus]
          Length = 1125

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L  YF      D  NR 
Sbjct: 765  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRS 824

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 825  NFLGHKGE---VAEEFGVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLL 881

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 882  FLMDGLHEDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIVALFQGQFKSTV 941

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 942  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 972

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 973  ECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1030

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N        + LF+V  H G 
Sbjct: 1031 LQTSVDFPLETLDLSQYVI----------------GPKNNL-----KRYNLFSVSNHYGG 1069

Query: 515  LDAGHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y + ++K  W+K DD  ++E++ ++V+++  Y++FY 
Sbjct: 1070 LDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYT 1114


>gi|363737746|ref|XP_003641901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Gallus
            gallus]
          Length = 1116

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L  YF      D  NR 
Sbjct: 756  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRS 815

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 816  NFLGHKGE---VAEEFGVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLL 872

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 873  FLMDGLHEDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIVALFQGQFKSTV 932

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 933  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 963

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 964  ECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1021

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N        + LF+V  H G 
Sbjct: 1022 LQTSVDFPLETLDLSQYVI----------------GPKNNL-----KRYNLFSVSNHYGG 1060

Query: 515  LDAGHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y + ++K  W+K DD  ++E++ ++V+++  Y++FY 
Sbjct: 1061 LDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYT 1105


>gi|426358866|ref|XP_004046711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
           gorilla gorilla]
          Length = 530

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL +Y LS  H++  C    G  LC      TM + + 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLASYMLSPEHSQ-TCHRHKGCMLC------TMQAHV- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  Y P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALYRPGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAM-KKACLPGHKQVDHHSND 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIRCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  +  + K +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYQCGLCLQKAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G    +GHY++Y++    +WYK DDA +T     +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHSGHYLSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|449061956|sp|C9J2P7.1|U17LF_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           15
          Length = 530

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +      K+D+ +Q+P  LDM  Y+S +                     N  
Sbjct: 279 VLKRFSDVT----GNKIDKNVQYPECLDMKLYMSQT---------------------NSG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|426343802|ref|XP_004038475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           6-like, partial [Gorilla gorilla gorilla]
          Length = 387

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 188/437 (43%), Gaps = 78/437 (17%)

Query: 146 SIIQSSKPEN-LRKRRRIDYRPWSPDLRE-RSLMVNNASPIDSMSSSNGDLPRGLR---- 199
           S + SS+P+    + +R      SP   E R  + ++ +P+    +    LP   R    
Sbjct: 18  SKLTSSRPDAAFAEIQRTSLSEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAA 77

Query: 200 ---GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
              GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM +
Sbjct: 78  VGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQA 130

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
            +    R  Y P   +      A+     +Q+DAHEF +  +D + +K     HK     
Sbjct: 131 HV---TRALYRPGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAM-KKACLPGHKQVDHH 186

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
           + D  + H++F G  RS + C+ C   S TFDP +D +LD++  Q               
Sbjct: 187 SNDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ--------------- 231

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
                           ++   L++  +PE L  +  + C  C  +  + K +++     V
Sbjct: 232 ----------------SVKQALEQLVKPEELNGENAYHCALCLQKAPASKTLTLHTSAKV 275

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
               +KRF   +  K+ + V    Q+P  LDM PY+S  I                    
Sbjct: 276 LILVLKRFSDVTGNKLVKNV----QYPECLDMQPYMSQQITGPLV--------------- 316

Query: 497 NEPSSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMM 554
                 + L+AV+ H G     GHY +Y++    +WYK DDA +T     +  + Q Y++
Sbjct: 317 ------YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVL 370

Query: 555 FYVQKMLYYKASEKQGT 571
           FY+QK  + + SE   T
Sbjct: 371 FYIQKSEWERHSESVST 387


>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
           africana]
          Length = 396

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 171/393 (43%), Gaps = 78/393 (19%)

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           + N    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S +     L 
Sbjct: 48  AKNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSSA-HTALM 106

Query: 249 CDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
            +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V +
Sbjct: 107 EEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNR 166

Query: 308 DQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTT 346
              +P+S                         D  I   +F G L+S + C  CG+ ST 
Sbjct: 167 VTVRPKSNPENLDRLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTECGYCSTV 225

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
           FDP  D SL +       +                           TLM C+  FT+ + 
Sbjct: 226 FDPFWDLSLPIAKRGYPEV---------------------------TLMDCMRLFTKEDV 258

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-S 465
           L  D+K  C +C  R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ FPL  
Sbjct: 259 LDGDEKPTCCRCGARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVSFPLRD 316

Query: 466 LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
           LD+  + S                       N   + + L+AV  H+G    GHY  Y R
Sbjct: 317 LDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYCR 354

Query: 526 L--SNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
              + +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 355 SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387


>gi|268638225|ref|XP_645473.2| UBP-type zinc finger-containing protein [Dictyostelium discoideum
           AX4]
 gi|256013071|gb|EAL71589.2| UBP-type zinc finger-containing protein [Dictyostelium discoideum
           AX4]
          Length = 836

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 119/226 (52%), Gaps = 63/226 (27%)

Query: 392 STLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRK 451
           +TL+ CL+RFT+PE+L  D+K+FC  C  +QES KQ+S   LP+V CFH+KRFE S   +
Sbjct: 618 NTLLSCLERFTQPEKL--DEKYFCPNCNSKQESTKQLSFDTLPMVICFHLKRFERSQAHR 675

Query: 452 MSRKVDRYLQFPLSLDMAPYLS---------------SSILRSRFGNRF----------- 485
            + K+D +++FP S+DM PY +               +SI    +G              
Sbjct: 676 RTHKIDTFIEFPTSIDMGPYTTIMKKKADAIDLNSSGTSIKSEDYGGDNNNNNINGNNSN 735

Query: 486 -----------------------FP-----FDGDESNTLNEPSSEFELFAVVTHTGKLDA 517
                                  FP      DGD S T       +ELFAVV HTGK+D+
Sbjct: 736 SNNNNNNNNIDSSFLNQLNDQDKFPSIIEQHDGDNSFT-------YELFAVVNHTGKIDS 788

Query: 518 GHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYY 563
           GHY ++++  + WYKCDD+ I+    + V  ++GY+++Y++K LYY
Sbjct: 789 GHYTSFVKHQDSWYKCDDSMISSTTIHNVLKSKGYLLYYLKKQLYY 834



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 113/243 (46%), Gaps = 44/243 (18%)

Query: 23  CPHLADFHARNGTKPFRAIQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRLYACMA 82
           C H+  +    G+K +  I++ +          I  D    P C VC +    RL+ C+ 
Sbjct: 52  CKHIDIYKQDGGSKRYEIIENYIF---SYKTKLINSDKLPTPYCMVC-NCFNGRLHICLH 107

Query: 83  CAAVSC----HVPPH--SSHVAIHATK------------------------TSSACSHEI 112
           C  VSC    H+  H   SH    A                          T++   H +
Sbjct: 108 CVHVSCWKQGHIHQHLGKSHPNPTAANNNNNNNNNNNTSTTSNSNQEEKNITNNNDIHFL 167

Query: 113 AVDVDRAELFCCACRDQVYDRDFDA---AVVLAHTTSIIQSSKPENLRKRRRIDYRPWSP 169
           AVD++  +++C  C+D +YD++FD    +V L  T ++I S  P      +R+ YR W P
Sbjct: 168 AVDLNLNQIYCHYCQDYIYDKEFDEIKDSVKLNITINLIDSKNPST----KRVKYRVWKP 223

Query: 170 DLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLS 229
              E   +  N+  +D   S+      GLRGLNNLGNTCFMNS+LQ+  H P LRNYFLS
Sbjct: 224 SDEESKFIKKNSEILDPTLSNPA---IGLRGLNNLGNTCFMNSILQSFLHNPLLRNYFLS 280

Query: 230 DRH 232
           D H
Sbjct: 281 DMH 283



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 6/114 (5%)

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
           ++CL C++D +F+ +F G + P++P  FLYS W +++    YEQQDAHEFFIS L+GIH 
Sbjct: 417 KICLGCEMDKLFTCVFSGVKFPFTPHHFLYSCWNYSNYFIGYEQQDAHEFFISSLNGIH- 475

Query: 304 KVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
                 H   + G    CI H  F G L+S+V C+ C FTS+T DP +D SLD+
Sbjct: 476 -----SHCGGTTGKDCDCIIHCTFGGALKSEVSCLTCQFTSSTSDPFIDISLDI 524


>gi|367003185|ref|XP_003686326.1| hypothetical protein TPHA_0G00560 [Tetrapisispora phaffii CBS 4417]
 gi|357524627|emb|CCE63892.1| hypothetical protein TPHA_0G00560 [Tetrapisispora phaffii CBS 4417]
          Length = 463

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 216/517 (41%), Gaps = 115/517 (22%)

Query: 63  VPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELF 122
           + +C  C +      + C+ C    C    +S H   H  K      H   ++     L+
Sbjct: 43  IKKCSDCHNIDNGSTFMCLQCGYCGCW---NSVHFIAHHKKVG----HIFGINSSNGLLY 95

Query: 123 CCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNAS 182
           C  C D V D +                           I++          S++  N +
Sbjct: 96  CFICDDYVGDSE--------------------------EINF----------SIVGKNWN 119

Query: 183 PI-DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYY---CQ 238
            I ++ S  + D   GL GL N+G+TC+M+ ++Q L   P    YFL    N+ +   C+
Sbjct: 120 YIAENTSFPSYDRKDGLSGLVNMGSTCYMSCIIQCLVRNP----YFLKHSFNQTHYKECK 175

Query: 239 SKNGVRLCLACDLDTMFSAIFCGDRMPYSPAK------FLYSWWRHASNLASYEQQDAHE 292
            ++ V  CL+C LD++   ++   +      K       L   W+   +L  Y QQDAHE
Sbjct: 176 IRDPVS-CLSCALDSVVFELYGKTQKKAVDDKNGGLIDILNCTWKINEDLVGYSQQDAHE 234

Query: 293 FFISMLDGIHEKVEKDQHK---PRSQGNGDCCIAHRVFSGILRSDVMCMACGFTS-TTFD 348
           F+  +++ IH + + + +    P+       CI H+VF G L S + C  C   S TT +
Sbjct: 235 FWQFLMNRIHSEYKLNNNTIEVPKDTHQLCNCIYHKVFQGFLESTIECANCRKESKTTTE 294

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
             +D SLDL+  +                               TL  CL+ F   E L 
Sbjct: 295 AYMDLSLDLKDKK-------------------------------TLYECLNSFHMKEEL- 322

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
            D  F C  C   Q +LKQ++I KLP V    +KRFEH  +   S K++  +++P  L M
Sbjct: 323 KDFTFHCSNCGGPQGALKQLTISKLPPVLLLQLKRFEH-KLNGQSSKLNDSIEYPPYLRM 381

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE---FELFAVVTHTGKLDAGHYVTYLR 525
             Y  +S                 + T++ P      +EL  V+ HTG ++ GHY+   +
Sbjct: 382 NDYCQTS----------------SNETIDSPDDSDIIYELIGVICHTGTVNEGHYICSCK 425

Query: 526 LS-NKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
           L+ N+W K +D+ IT V+  TV   Q Y++ Y  K +
Sbjct: 426 LANNQWVKFNDSMITIVDNETVLKEQAYLLIYSTKQV 462


>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
           guttata]
          Length = 1079

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 158/361 (43%), Gaps = 60/361 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS LQ L +TPPL NY LS  H R           C+ C +       F
Sbjct: 123 GLSNLGNTCFLNSALQCLTYTPPLTNYLLSREHGRTCAHGS----FCMMCTMQNHMIQTF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    + + NL    Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPLSIIRDLKKISHNLRFGRQEDAHEFLRYTIDAMQKACLNGYTKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C+ C   S T+DP +D +L++E                     
Sbjct: 239 TLV-HQIFGGYLRSRVKCLECKTVSDTYDPYLDVTLEVE--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +PE+LG D  + C  C+ +  + K+ +I +   V   
Sbjct: 277 ----------RAANIVRALELFVKPEQLGGDNAYRCSMCRKKVLASKRFTIHRASNVLTI 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   S     RK+ + + +P  LD+ P++S                GD        
Sbjct: 327 SLKRFGSCS-SSGGRKITKDVGYPEFLDIRPFMSEP-------------KGDPIT----- 367

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G   +AGHY  Y++ SN +WY+ +D  +   N   V   Q Y++FY+
Sbjct: 368 ---YGLYAVLVHSGYSCNAGHYFCYVKASNGQWYRMNDHEVHPSNIKVVLNQQAYVLFYL 424

Query: 558 Q 558
           +
Sbjct: 425 R 425


>gi|18416380|ref|NP_567705.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
 gi|75265551|sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
           Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName:
           Full=Ubiquitin thioesterase 16; AltName:
           Full=Ubiquitin-specific-processing protease 16
 gi|4220534|emb|CAA23007.1| putative protein [Arabidopsis thaliana]
 gi|7269306|emb|CAB79366.1| putative protein [Arabidopsis thaliana]
 gi|332659526|gb|AEE84926.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
          Length = 1008

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 65/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GN+CF N V Q L  TPPL  YFL   H+R  C  K     C  C  + +     
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRA-CTKKEQ---CFTCGFEKLVVKA- 597

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK--DQHKPRSQGN 317
             ++ P SP   L         L + +++DAHEF   ++D +     K  +    +S   
Sbjct: 598 KEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKL 657

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  +    F G LRS + CM C   S   +  +D +++++ +                 
Sbjct: 658 EDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGD----------------- 700

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                        ISTL   L RFTR E L  + K+ C  C+  + + K++ I + P V 
Sbjct: 701 -------------ISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVL 747

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF+     K+    ++ ++FP +LD+APY+S                       +
Sbjct: 748 TIALKRFQAGKFGKL----NKLIRFPETLDLAPYVSGG---------------------S 782

Query: 498 EPSSEFELFAVVTHTGKLDA---GHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMM 554
           E S +++L+ V+ H   ++A   GHYV Y+R  NKWYK DD+ +   +   +     YM+
Sbjct: 783 EKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERILTKGAYML 842

Query: 555 FYVQ 558
           FY +
Sbjct: 843 FYAR 846


>gi|379643059|ref|NP_001243823.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 15 [Homo
           sapiens]
          Length = 559

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +      K+D+ +Q+P  LDM  Y+S +                     N  
Sbjct: 279 VLKRFSDVT----GNKIDKNVQYPECLDMKLYMSQT---------------------NSG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|11993477|gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabidopsis thaliana]
          Length = 1008

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 65/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GN+CF N V Q L  TPPL  YFL   H+R  C  K     C  C  + +     
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRA-CTKKEQ---CFTCGFEKLVVKAK 598

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK--DQHKPRSQGN 317
             ++ P SP   L         L + +++DAHEF   ++D +     K  +    +S   
Sbjct: 599 -EEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKL 657

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  +    F G LRS + CM C   S   +  +D +++++ +                 
Sbjct: 658 EDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGD----------------- 700

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                        ISTL   L RFTR E L  + K+ C  C+  + + K++ I + P V 
Sbjct: 701 -------------ISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVL 747

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF+     K+    ++ ++FP +LD+APY+S                       +
Sbjct: 748 TIALKRFQAGKFGKL----NKLIRFPETLDLAPYVSGG---------------------S 782

Query: 498 EPSSEFELFAVVTHTGKLDA---GHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMM 554
           E S +++L+ V+ H   ++A   GHYV Y+R  NKWYK DD+ +   +   +     YM+
Sbjct: 783 EKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERILTKGAYML 842

Query: 555 FYVQ 558
           FY +
Sbjct: 843 FYAR 846


>gi|353234548|emb|CCA66572.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Piriformospora
           indica DSM 11827]
          Length = 701

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 158/363 (43%), Gaps = 64/363 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGN+CFMNS LQ L HT PL N  LS RH+   C+       C  C L  +   I 
Sbjct: 136 GLHNLGNSCFMNSTLQILLHTAPLLNVLLSHRHDS--CKLALDGSYCFTCQLRKLALDIL 193

Query: 260 C-GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
           C   R   SP     +  R +  L  Y Q+DAHEF    +D +    + +  K   +   
Sbjct: 194 CRKSRQARSPEDIFRNLKRISPTLRQYRQEDAHEFLRFSIDALQLSAQ-NGVKSVPEKLA 252

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
                +R+F G  RS V C +CG  S TFD  +D S+D+                    C
Sbjct: 253 ATSWVYRLFGGQFRSRVTCGSCGHNSDTFDTLLDLSVDI------------------AKC 294

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           +             TL   L  F+  ERL    K+ C++C+    + KQ+++ K P+  C
Sbjct: 295 D-------------TLKQALRMFSAIERLEGSNKYKCEKCKKPVNAKKQITVHKAPMALC 341

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF         RK+   + +P +L +   LS                       N+
Sbjct: 342 IQLKRFS-----PWGRKITNMIDYPETLSLNEILSD----------------------NQ 374

Query: 499 PSSEFELFAVVTHTGK-LDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            S  ++L+ V+ H G   ++GHY T+++  + KW + +D  +  +    + +   YM+FY
Sbjct: 375 TSPMYQLYGVIVHAGSGPNSGHYYTFVKNYAGKWLRINDDEVDTIPRAPLGSKNAYMLFY 434

Query: 557 VQK 559
           +++
Sbjct: 435 MRR 437


>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
            gallopavo]
          Length = 1124

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 186/402 (46%), Gaps = 76/402 (18%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L  YF  + ++    +S
Sbjct: 764  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYHDDINRS 823

Query: 240  K-NGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
               G +  +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  + ++
Sbjct: 824  NFLGHKGEVAEEFGVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLM 883

Query: 299  DGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDVMCM 338
            DG+HE + K D  K   + N D                     I   +F G  +S V C+
Sbjct: 884  DGLHEDLNKADNRKRYKEENNDHLDDLRAAELAWQKHKQLNESIIVALFQGQFKSTVQCL 943

Query: 339  ACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCL 398
             C   S TF+  +  SL L                           S+  C   TL  CL
Sbjct: 944  TCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQECL 974

Query: 399  DRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDR 458
              F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K+  
Sbjct: 975  RLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQKLQT 1032

Query: 459  YLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDA 517
             + FPL +LD++ Y+                 G ++N        + LF+V  H G LD 
Sbjct: 1033 SVDFPLETLDLSQYVI----------------GPKNNL-----KRYNLFSVSNHYGGLDG 1071

Query: 518  GHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFYV 557
            GHY  Y + ++K  W+K DD  ++E++ ++V+++  Y++FY 
Sbjct: 1072 GHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYT 1113


>gi|402912436|ref|XP_003918772.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Papio anubis]
          Length = 529

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 193/436 (44%), Gaps = 79/436 (18%)

Query: 143 HTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSL-MVNNASPIDSMSSSNGDLPRGLR-- 199
           H + +I S       + +R      SP   E  + + ++ +P+    +    LP   R  
Sbjct: 16  HFSKLISSRPDAAFAEIQRTSLPEKSPLSSETQVNLCDDLAPVARQPAPRKKLPLSSRRP 75

Query: 200 -----GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
                GL N+GNTC++N+ LQ L +TPPL NY LS  H++  CQ     + C+ C ++  
Sbjct: 76  AAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-LCQRH---KCCMLCTMEAH 131

Query: 255 FS-AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
            + A+ C   +   P++ L      A+     +Q+DAHEF + ++D + +K     HK  
Sbjct: 132 ITRAVHCPGHV-IQPSQAL------AAGFHRGKQEDAHEFLMFIVDAM-KKACLPGHKQV 183

Query: 314 SQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
              + D  + H++F G  RS + C+ C   S TFDP +D +LD++  Q            
Sbjct: 184 DHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQ------------ 231

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
                              ++   L++  +PE L  +  + C  C  +  + K  ++   
Sbjct: 232 -------------------SVKQALEQVMKPEELNGENAYHCGLCLQKAPASKTFTLHTS 272

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
             V    +KRF   +  K+++ V    Q+P  LDM PY+S                    
Sbjct: 273 AKVLILVLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ------------------ 310

Query: 494 NTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQG 551
              N     + L+AV+ H G     GHY++Y++    +WYK DDA +T  +  +V + Q 
Sbjct: 311 ---NTGPLVYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQA 367

Query: 552 YMMFYVQKMLYYKASE 567
           Y++FY+QK    + SE
Sbjct: 368 YVLFYIQKSELERCSE 383


>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
            guttata]
          Length = 1087

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 185/410 (45%), Gaps = 92/410 (22%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L  YF     NR   Q+
Sbjct: 727  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYF-----NRNLYQA 781

Query: 240  KN------GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
                    G +  +A +   +  A++ G     SP  F  +  +     + Y QQD+ E 
Sbjct: 782  DINRSNFLGHKGEVAEEFGVIMKALWAGQYKYISPKDFKITIGKINDQFSGYSQQDSQEL 841

Query: 294  FISMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRS 333
             + ++DG+HE + K D  K   + N D                     I   +F G  +S
Sbjct: 842  LLFLMDGLHEDLNKADNRKRYKEENNDHLDDSSAAEIAWHKHKQLNESIIVALFQGQFKS 901

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           SS  C   T
Sbjct: 902  TVQCLTCHKRSRTFEAFMYLSLPL--------------------------ASSSKC---T 932

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 933  LQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 990

Query: 454  RKVDRYLQFPL-SLDMAPYL---SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            +K+   + FPL +LD++ Y+    +S+ R                        + LF+V 
Sbjct: 991  QKLQTSVDFPLETLDLSQYVIGPKTSLKR------------------------YNLFSVS 1026

Query: 510  THTGKLDAGHYVTYLRLSNK--WYKCDDAWITEVNENTVRAAQGYMMFYV 557
             H G LD GHY  Y + ++K  W+K DD  ++E++ ++V+++  Y++FY 
Sbjct: 1027 NHYGGLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYT 1076


>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
           mulatta]
          Length = 530

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 166/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H+   C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSP-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P + +      A++    +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 133 --TRALHIPGRVIQPSQALAADFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V     +P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGSKLAKNV----HYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|153792150|ref|NP_958804.2| ubiquitin carboxyl-terminal hydrolase 17 [Homo sapiens]
 gi|187663988|sp|Q6R6M4.2|U17L2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
           Short=USP17; AltName: Full=Deubiquitinating enzyme
           17-like protein 2; AltName: Full=Deubiquitinating
           protein 3; Short=DUB-3; AltName: Full=Ubiquitin
           carboxyl-terminal hydrolase 17-like protein 2; AltName:
           Full=Ubiquitin thioesterase 17-like protein 2; AltName:
           Full=Ubiquitin-specific-processing protease 17-like
           protein 2
          Length = 530

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 175/400 (43%), Gaps = 76/400 (19%)

Query: 177 MVNNASPIDSMSSSNGDLPRGLR-------GLNNLGNTCFMNSVLQALFHTPPLRNYFLS 229
           + ++ +P+    +    LP   R       GL N+GNTC+ N+ LQ L +TPPL NY LS
Sbjct: 51  LCDDLAPVARQLAPRKKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTPPLANYMLS 110

Query: 230 DRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQD 289
             H++  CQ     + C+ C +    +         +SP   +      A+     +Q+D
Sbjct: 111 REHSQ-TCQRP---KCCMLCTMQAHITWAL------HSPGHVIQPSQALAAGFHRGKQED 160

Query: 290 AHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDP 349
           AHEF +  +D + +K     HK     + D  + H++F G  RS + C+ C   S TFDP
Sbjct: 161 AHEFLMFTVDAM-KKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDP 219

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
            +D +LD++  Q                               ++   L++  +PE L  
Sbjct: 220 YLDIALDIQAAQ-------------------------------SVKQALEQLVKPEELNG 248

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMA 469
           +  + C  C  R  + K +++     V    +KRF   +  K+++ V    Q+P  LDM 
Sbjct: 249 ENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNV----QYPECLDMQ 304

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRL-S 527
           PY+S                       N     + L+AV+ H G     GHY +Y++   
Sbjct: 305 PYMSQQ---------------------NTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQE 343

Query: 528 NKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASE 567
            +WYK DDA +T  +  +V + Q Y++FY+QK  + + SE
Sbjct: 344 GQWYKMDDAKVTACSITSVLSQQAYVLFYIQKSEWERHSE 383


>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
 gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
          Length = 919

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 176/367 (47%), Gaps = 66/367 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT-MFSAI 258
           GLNN+GNTCFMNSVLQ L +T PL N+ +S  H+R  CQ+      C+ C L+T +  + 
Sbjct: 235 GLNNVGNTCFMNSVLQCLTYTVPLANFMMSREHSR-QCQASG---FCIFCSLETQVLQSH 290

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
            CG +   +P +   +  + A       Q+D+HEF   M++ + +KV   ++   S  + 
Sbjct: 291 KCGGK-SITPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESL-QKVSLSKYPKGSINHR 348

Query: 319 DC--CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
           D    +   +F G LRS V C  C + S T+DP +D  +D+  NQ  S            
Sbjct: 349 DAMTTVIGSIFGGYLRSQVKCSQCQYESNTYDPFMDLCVDI--NQADS------------ 394

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
                            L   L  F + E L    K+ C +C+   ++ K++ I   P +
Sbjct: 395 -----------------LTKGLTNFVKSELLDGSNKYKCSKCKKLVKAQKRLQIHIAPPI 437

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
               IKRF  S +     K++R +QF  SL+++P+++ S                     
Sbjct: 438 LTCQIKRF--SFLGSYGGKINRQIQFDQSLNLSPFMTQS--------------------- 474

Query: 497 NEPSSEFELFAVVTHT-GKLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
               S ++L+AV+ H  G   +GHY  Y++ SN  WY  DD+ +++V+ NTV + + YM+
Sbjct: 475 -NNHSIYDLYAVLVHLGGSTSSGHYYCYVKGSNGIWYNMDDSSVSQVSLNTVLSQKAYML 533

Query: 555 FYVQKML 561
           FY ++ +
Sbjct: 534 FYSKRNI 540


>gi|297796717|ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
 gi|297312078|gb|EFH42502.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
          Length = 863

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 163/362 (45%), Gaps = 63/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL     +  H +Y C        C  C +        
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKY-CHVAG---FCALCAIQKHVRTAR 163

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P   + +    + N  +  Q+DAHE+ I++L+ +H+          S     
Sbjct: 164 QATGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYR 223

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H +F G LRS V C  C   S  FDP +D SLD+                     +
Sbjct: 224 RSLVHNIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI--------------------SK 263

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFF-CQQCQVRQESLKQMSIRKLPLVSC 438
           AD           +L   L RFT  E L    K + C++C+ + ++ KQ+++ K P V  
Sbjct: 264 AD-----------SLQRALSRFTAVELLDDGSKVYQCERCKQKVKARKQLTVSKAPYVLT 312

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRFE     K+ RKVD    F  ++DM P++S             P +G+       
Sbjct: 313 IHLKRFEAHRSEKIDRKVD----FASAIDMKPFVSG------------PHEGN------- 349

Query: 499 PSSEFELFAVVTHTGKLD-AGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G+   +GHY  ++R S+  WY  DD  + +V+E TV   + YM+FY
Sbjct: 350 --LKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVLQVSEKTVFNQKAYMLFY 407

Query: 557 VQ 558
           V+
Sbjct: 408 VR 409


>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 23-like [Cucumis sativus]
          Length = 898

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 167/361 (46%), Gaps = 60/361 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L +T PL  Y  S +H      S +    C  C +    S   
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQ----NSCHVAGFCALCAIQKHVSRAL 157

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P   + +    + N  +  Q+DAHE+ +++L+ +H+          S    +
Sbjct: 158 QSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPLGLPSESPSAYE 217

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V CM C   S  FDP +D SLD+                     +
Sbjct: 218 KSLVHKIFGGRLRSQVKCMQCSXCSNKFDPFLDLSLDI--------------------VK 257

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
           AD           ++      FT PE L G  +++ CQQC+ + ++LKQ ++ K P V  
Sbjct: 258 AD-----------SIYKAFKNFTTPELLDGGXRQYQCQQCKQKVKALKQFTVHKAPYVLT 306

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF+  +   +  K+ + + F  +LD+AP++S S            +DGD   TL  
Sbjct: 307 IHLKRFQSYN---LEEKIHKKIHFGPTLDLAPFVSGS------------YDGDLKYTL-- 349

Query: 499 PSSEFELFAVVTHTGKLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYV 557
                    +V H G   +GHY  Y+R S+  WY  DD  ++ V + TV   Q YM+FYV
Sbjct: 350 ------YGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFYV 403

Query: 558 Q 558
           +
Sbjct: 404 R 404


>gi|297804390|ref|XP_002870079.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315915|gb|EFH46338.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1082

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 195/413 (47%), Gaps = 79/413 (19%)

Query: 161 RIDYRPWSPDLRER--SLMVNNASPIDSMSSSNGDLPR------GL-RGLNNLGNTCFMN 211
           R  +RPW+P++     S   ++ S  +S+  S    P+      G+  GL NLGNTCF+N
Sbjct: 514 REAHRPWTPNVSPGFGSDDDDDNSKTESLRKSLFGFPQEPEPVTGVGAGLWNLGNTCFLN 573

Query: 212 SVLQALFHTPPLRNYFLSDRHNRYY--CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPA 269
           SV Q   HT PL     S R  +Y   C   N    C+   L     A    +R P +P 
Sbjct: 574 SVFQCFTHTVPL---IESLRAYKYEVPCHCGNEF-FCVIRALRYHIEAALRPERCPIAPY 629

Query: 270 KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS-QGNGDCCIAHRVFS 328
            FL +    + +   Y+Q+DAHEF  + L    EK+E+     RS  GN     +  VF+
Sbjct: 630 YFLNNLNYFSPDFQRYQQEDAHEFLQAFL----EKLERCGSDRRSFHGN---ISSQDVFA 682

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           G L S + C  C   S TF+  V  SL++E                    +AD       
Sbjct: 683 GRLISGLRCCNCNSVSETFEKSVGLSLEIE--------------------DAD------- 715

Query: 389 CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS 448
               TL   L+ FTR E+L  D++  C  C  +    KQM + KLPLV+ FH+KRF+ + 
Sbjct: 716 ----TLGSALESFTRVEKL--DEQLTCDTCNEKVSKEKQMLLDKLPLVATFHLKRFKTNG 769

Query: 449 VRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAV 508
                 K+ ++++ PL +D+ PY+ +S                     NE S+++ L+A+
Sbjct: 770 F--FMEKIFKHVKIPLEIDLQPYMRNS-------------------QENEVSTKYHLYAL 808

Query: 509 VTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           V H G  +  GHY +Y+R + K W+  DD+ +T ++E+ V +   Y++FY ++
Sbjct: 809 VEHLGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDRVLSQDSYILFYARE 861


>gi|449666470|ref|XP_002164031.2| PREDICTED: uncharacterized protein LOC100201504 [Hydra
           magnipapillata]
          Length = 995

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 80/412 (19%)

Query: 171 LRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSD 230
           L +R+    +AS ++ ++   G + R L GL NLGNTC+MNSV+Q L  T PL  YF + 
Sbjct: 627 LVDRTTKPVSASRLEKLAPIYGSMGRVLTGLKNLGNTCYMNSVIQCLACTLPLGKYFTTG 686

Query: 231 RHNRYY--CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
            + ++   C + N     LA +L  +   I  G+    SP  F  +  + A + + ++QQ
Sbjct: 687 MYEKHLNLCNT-NAHPGELARELAFLIIVISAGEYRSVSPIDFKIALGKFAPDFSGFKQQ 745

Query: 289 DAHEFFISMLDGIHEKVEKDQHKP---------------------RSQGNGDCCIAHRVF 327
           DAHE  +  +DG+HE V K   K                        + N D  I   +F
Sbjct: 746 DAHELLMFFMDGLHEDVNKIVKKEIIKVKETDNLSDEIAADIAWKDYKLNNDSVIVD-LF 804

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            G  RS V C++C   S TFD      L L  NQ +                        
Sbjct: 805 QGQFRSTVTCLSCNKRSKTFDAFNCLQLPLPSNQST------------------------ 840

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
                TL  C+  FT+ E++G +  + C  C+  +E+ K + I KLP V    +KRF   
Sbjct: 841 -----TLENCIQTFTKAEKIGGNDSWKCSNCKRYREASKTIEIWKLPPVLIIQLKRFHFD 895

Query: 448 SVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
              +   K+   + FP+ + +M+ Y+ +                          +++ L+
Sbjct: 896 G--RWHNKIQTTVNFPMQNFNMSKYIVAP---------------------QSIHTKYHLY 932

Query: 507 AVVTHTGKLDAGHYVT--YLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           AV+ H G  ++GHY          KWY  DD+ + E++ N+++    Y++FY
Sbjct: 933 AVINHYGSFESGHYTANCVNPYYEKWYNFDDSIVKEIDVNSIKTNTAYLLFY 984


>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
 gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
          Length = 383

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 173/386 (44%), Gaps = 79/386 (20%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L + + R     K      +  +   + 
Sbjct: 43  QGLVGLRNLGNTCFMNSILQCLSNTKDLRDYCLQNSYRRDLSSKK--CNTAIMEEFARLL 100

Query: 256 SAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
            AI+        SP++F     ++A     Y QQDA EF   +LDG+H +V +   KPR 
Sbjct: 101 QAIWTSSANEVVSPSEFKTQIQKYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVTVKPRP 160

Query: 315 QGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
                                    D  I   +F G L+S + C  CG+ ST FDP  D 
Sbjct: 161 SSQDLDHMPDSEKGKHMWKRYLEREDSRIVE-LFVGQLKSSLTCTECGYCSTVFDPFWDL 219

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SL +     S +                           +L+ C+  FT+ + L  D+K 
Sbjct: 220 SLPIAKKSASEV---------------------------SLVDCMRLFTKEDVLDGDEKP 252

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYL 472
            C +C+ R+   K+ +I+K P +   H+KRF    +R  S K+  ++ FPL  LD+  + 
Sbjct: 253 TCCRCKARRRCTKKFTIQKFPKILVLHLKRFSEGRIR--SGKLSTFVNFPLKDLDLREFS 310

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKW 530
           S                  ESN    P + + L+AV  H+G    GHY  Y +   + +W
Sbjct: 311 S------------------ESN----PHATYNLYAVSNHSGTTMGGHYTAYCKNPSNGEW 348

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFY 556
           Y  +D+ +T ++ N VR++  Y++FY
Sbjct: 349 YTFNDSRVTAMSSNQVRSSDAYVLFY 374


>gi|402912993|ref|XP_003919017.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Papio anubis]
          Length = 529

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 167/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  CQ     + C+ C ++   +   
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQ-LCQRH---KCCMLCTMEAHIT--- 133

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF + ++D + +K     HK     + D
Sbjct: 134 ---RAVHCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAM-KKACLPGHKQVDHDSED 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  +  + K  ++     V   
Sbjct: 232 -------------SVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTGK-LDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY++Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK    + SE
Sbjct: 374 QKSELERCSE 383


>gi|402912765|ref|XP_003918915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like, partial [Papio anubis]
          Length = 400

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+MN+ LQ L +TPPL NY LS  H++  C      + C+ C ++   +   
Sbjct: 81  GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQ-LCHRH---KCCMLCTMEAHIT--- 133

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF + ++D + +K     HK     + D
Sbjct: 134 ---RALHCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAM-KKACLPGHKQVDHDSED 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q  S+K +           
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQ--SVKQA----------- 236

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                             L++  +PE L  +  + C  C  +  + K  ++     V   
Sbjct: 237 ------------------LEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LD+ PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDVQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY++Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK    + SE
Sbjct: 374 QKSELERCSE 383


>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
           melanoleuca]
 gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
          Length = 606

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 179/397 (45%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S N V 
Sbjct: 257 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSN-VH 312

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 373 EVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 431

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +                           + +     TLM C+  FT
Sbjct: 432 CSTVFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFT 464

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 465 KEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNF 522

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 523 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 560

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 561 AYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597


>gi|402913327|ref|XP_003919158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like, partial [Papio anubis]
          Length = 392

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+MN+ LQ L +TPPL NY LS  H++  C      + C+ C ++   +   
Sbjct: 81  GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQ-LCHRH---KCCMLCTMEAHIT--- 133

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF + ++D + +K     HK     + D
Sbjct: 134 ---RALHCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAM-KKACLPGHKQVDHDSED 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q  S+K +           
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQ--SVKQA----------- 236

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                             L++  +PE L  +  + C  C  +  + K  ++     V   
Sbjct: 237 ------------------LEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LD+ PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDIQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY++Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK    + SE
Sbjct: 374 QKSELERCSE 383


>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
           [Cavia porcellus]
          Length = 396

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 190/420 (45%), Gaps = 82/420 (19%)

Query: 163 DYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPP 222
           + RP SP     SL+++    +    + N   P+GL GL NLGNTCFMNS+LQ L +T  
Sbjct: 24  ELRPRSP--LSPSLLISTFVGLLLNKAKNSKSPQGLAGLRNLGNTCFMNSILQCLSNTRE 81

Query: 223 LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF--CGDRMPYSPAKFLYSWWRHAS 280
           LR+Y L   + R    + + V   L  +   +   I+  C + +  SP++F     R+A 
Sbjct: 82  LRDYCLQRLYMRDLSHT-SSVHTGLMEEFAKLIQTIWTSCPNDV-VSPSEFKTQIQRYAP 139

Query: 281 NLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG---------------------D 319
               Y QQDA EF   +LDG+H +V +   +P+S                         D
Sbjct: 140 RFVGYNQQDAQEFLRFLLDGLHNEVNRVAVRPKSSHENLDHLPDDEKGRQMWRKYLERED 199

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             I   +F G L+S + C  CG+ ST FDP  D SL +                      
Sbjct: 200 SRIGD-LFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPI---------------------- 236

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                + +     TLM C+  FT+ + L  D+K  C +C+ R+  +K+ SI++ P +   
Sbjct: 237 -----AKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSIQRFPKILVL 291

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
           H+KRF  S +R  + K+  ++ FPL  LD+  + S                       N 
Sbjct: 292 HLKRFSESRIR--TSKLSTFVNFPLRDLDLREFASE----------------------NT 327

Query: 499 PSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             + + L+AV  H+G    GHY  Y R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 328 NHAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387


>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Papio anubis]
          Length = 529

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+MN+ LQ L +TPPL NY LS  H++   + K     C+ C ++   +   
Sbjct: 81  GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCHRHK----CCMLCTMEAHIT--- 133

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF + ++D + +K     HK     + D
Sbjct: 134 ---RALHCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAM-KKACLPGHKQADHDSED 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  +  + K  ++     V   
Sbjct: 232 -------------SVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LD+ PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDIQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY++Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK    + SE
Sbjct: 374 QKSELERCSE 383


>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
           aries]
 gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
           aries]
          Length = 606

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 177/397 (44%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S     
Sbjct: 257 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSR-AH 312

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 373 EVNRVTARPKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 431

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +            TK  +                  TLM C+  FT
Sbjct: 432 CSTVFDPFWDLSLPI------------TKRGYP---------------EVTLMDCMRLFT 464

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C  C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 465 KEDVLDGDEKPTCCHCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTAFVNF 522

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 523 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 560

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R  ++ +W+  +D+ ++ ++ + VR +  Y++FY
Sbjct: 561 AYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFY 597


>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
 gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
          Length = 340

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 163/383 (42%), Gaps = 79/383 (20%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCFMNS++Q L HT PL  Y L D +        +  R  L     T+  +I+
Sbjct: 2   GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 61

Query: 260 CGDRMPY--SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR---- 313
                 Y  SP  F     + A     Y QQD+ EF   +L G+HE + +   +PR    
Sbjct: 62  RSSNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITSRPRHVTT 121

Query: 314 --------SQGNGDCCIAHR---------VFSGILRSDVMCMACGFTSTTFDPCVDFSLD 356
                   SQ   +    +           F G L+S + C  CG  S TFDP  D SL 
Sbjct: 122 EIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKSTLKCSVCGHKSVTFDPFWDLSLP 181

Query: 357 LEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQ 416
           + P    S+                           T+  CL  FT+ E L  D+K  C 
Sbjct: 182 I-PKSSDSV---------------------------TIQQCLSLFTKEEVLDGDEKPTCS 213

Query: 417 QCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSS 475
            C+ RQ   K  +I + P +   H+KRF  S   +   K++  ++FPL+ LD+ PY+S  
Sbjct: 214 NCKTRQRCTKSFTIHRCPKILVLHLKRF--SPGERFRAKLNTRVEFPLTNLDLCPYMS-- 269

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKC 533
                                N     + L+AV  H+G   +GHY        S +W++C
Sbjct: 270 ---------------------NSHYVMYNLYAVSNHSGSTYSGHYTATCLHPKSGEWHEC 308

Query: 534 DDAWITEVNENTVRAAQGYMMFY 556
           +D  +TEV+ + V +++ Y++FY
Sbjct: 309 NDTKVTEVSSSRVASSEAYVLFY 331


>gi|402912282|ref|XP_003918703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Papio anubis]
 gi|402912555|ref|XP_003918822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Papio anubis]
          Length = 529

 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+MN+ LQ L +TPPL NY LS  H++   + K     C+ C ++   +   
Sbjct: 81  GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCHRHK----CCMLCTMEAHIT--- 133

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF + ++D + +K     HK     + D
Sbjct: 134 ---RALHCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAM-KKACLPGHKQVDHDSED 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  +  + K  ++     V   
Sbjct: 232 -------------SVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LD+ PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDIQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY++Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK    + SE
Sbjct: 374 QKSELERCSE 383


>gi|345305034|ref|XP_001506997.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Ornithorhynchus anatinus]
          Length = 368

 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 173/382 (45%), Gaps = 69/382 (18%)

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
           S+ +G   +G+ GL NLGNTC+MN+VLQ L    PL  YFLS +    Y  + +  R  +
Sbjct: 31  SAGSGARAQGVTGLRNLGNTCYMNAVLQCLASIAPLVEYFLSGK----YVTALHRDRGEV 86

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
           A  L  + + ++ GD    +P  F  +            QQDA EF I +L+ +HE ++K
Sbjct: 87  ATALAYLLTDMWLGDADCVAPEVFRLAVGDRHPAFGKKSQQDAQEFLIFVLNALHEALKK 146

Query: 308 DQHKPRSQ----------GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
            + +  S+            G+  I  ++F G L  DV+C+ C   S   +     SL +
Sbjct: 147 PRRRKPSEKAASRRGGKAAAGESSIVSQLFEGQLSYDVVCLKCDSCSYKGETFTVLSLPI 206

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
                         S++ C                +L  CL+RF + + L  + + +C  
Sbjct: 207 -------------PSHYQC----------------SLQECLERFFQQDTLRWNNQIYCSY 237

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSI 476
           C  +Q++  + ++ K P V  FH+KRFE     KM RK+   +++PL+ LD++PY+    
Sbjct: 238 CDAKQDAAVRATVVKAPNVVIFHLKRFE--CYGKMKRKLRTNIRYPLANLDLSPYIYPPC 295

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCD 534
            +                       ++ L+AVV H G LD GHY    +  ++  W+  D
Sbjct: 296 RK---------------------HPKYNLWAVVNHFGDLDGGHYTALCKNTVTQSWFSFD 334

Query: 535 DAWITEVNENTVRAAQGYMMFY 556
           D  + EV E  V+ A  Y++ Y
Sbjct: 335 DTRVCEVPEAAVQTAAAYLLCY 356


>gi|256081222|ref|XP_002576871.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
          Length = 1027

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 177/388 (45%), Gaps = 86/388 (22%)

Query: 200  GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN-GVRLCLACDLDTMFSAI 258
            GL NLGNTC++NSV+Q+L HT  L +YFL   H R    S   G    +    + + SA+
Sbjct: 677  GLRNLGNTCYINSVVQSLSHTRALVHYFLDGFHERQAVVSNRLGYGGEIVKHFEMLLSAL 736

Query: 259  FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQ 315
            +          KF  +  +H S  +S +QQD+ EF + +LDG+HE   +V+K+ +  + +
Sbjct: 737  YNQPNQDAELYKFRSAVAKHQSKFSSNDQQDSLEFLLFLLDGLHEDLNEVKKNNNSTKLK 796

Query: 316  GNGDCC-------------IAHR---------VFSGILRSDVMCMACGFTSTTFDPCVDF 353
             N                 I H+          F G+LRS V C +C  TSTTFD  +  
Sbjct: 797  HNESMIEYTSSNEQAEAAWIQHKDFNNSIIVSSFQGLLRSTVKCNSCHVTSTTFDVFMVL 856

Query: 354  SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
            SL +E N+                C+              L  CL  F   E +    ++
Sbjct: 857  SLPIEQNK----------------CQ--------------LTDCLKLFLEKEEMVGQCRW 886

Query: 414  FCQQCQVRQESLKQMSIRKLPLVSCFHIKRF--EHSSVRKMSRKVDRYLQFPLS-LDMAP 470
             C  C  R+++ K + + KLP     H+KRF  E+ + RK +  VD    FP+  LDM+ 
Sbjct: 887  HCPSCNTRRDASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVD----FPIECLDMSS 942

Query: 471  YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSN 528
            ++    L                      SSE+ L++V+ H G +++GHY T+ R     
Sbjct: 943  FIVGPKLH---------------------SSEYALYSVLNHRGTMESGHYTTFCRNIRDG 981

Query: 529  KWYKCDDAWITEVNENTVRAAQGYMMFY 556
            +WY+ DD  ++ +++N ++    Y++FY
Sbjct: 982  RWYEYDDENVSLLDKNEIQNDNAYILFY 1009


>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
          Length = 756

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 173/385 (44%), Gaps = 84/385 (21%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK--NGVRLCLACDLDTM 254
           GL GLNNLGNTCFMNS+LQ L +T PL  Y L DR  +   +S   NG+      DL   
Sbjct: 160 GLVGLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADL--- 216

Query: 255 FSAIFCGD--RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
              I+  D      SP++F     R A     Y QQD+ EF   +L+G+H +V + Q +P
Sbjct: 217 MKEIWDPDMANSSTSPSRFKSQIQRFAPRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRP 276

Query: 313 --------------------RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVD 352
                               R   + D      +F G L S + C  C F STTFDP  D
Sbjct: 277 NPIKPDYEAEDYNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECGECSFKSTTFDPFWD 336

Query: 353 FSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQK 412
            SL +             KSN S                  ++ CL+ FT  E L  +++
Sbjct: 337 LSLPIP-----------KKSNVS------------------ILDCLNLFTSKEELDGNER 367

Query: 413 FFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR-KMSRKVDRYLQFPL-SLDMAP 470
             C +C+ R+   K  SI+K P +   H+KRF     R KMS  VD    +PL +LD+  
Sbjct: 368 PICSRCKTRRRCAKSFSIQKFPQILVLHLKRFSGERFRSKMSVMVD----YPLRNLDLIG 423

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVT--YLRLSN 528
           + +SS                      + S++++L+AV  H+G +  GHY        + 
Sbjct: 424 FATSSC--------------------TQKSAQYKLYAVSNHSGSVYTGHYTASCLNPYTG 463

Query: 529 KWYKCDDAWITEVNENTVRAAQGYM 553
            W+  +D+ +  ++EN+V +A+GY+
Sbjct: 464 DWHSFNDSHVHAISENSVVSAEGYV 488


>gi|357143373|ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
           [Brachypodium distachyon]
          Length = 1051

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 164/362 (45%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++NSVLQ L +T P   Y  S +H +  C++      C  C L        
Sbjct: 83  GLQNLGNTCYLNSVLQCLTYTEPFVAYLQSGKH-KSSCRTAG---FCALCALQNHVRCAL 138

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P +F+ +    + +  +Y Q+DAHE  +++L+ +H+         +S    +
Sbjct: 139 QSTGKILTPMQFVKNLRCISRSFRNYRQEDAHELMVNLLESMHKCCLPSGMPSQSPSAYE 198

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + HR+F G LRS V C++C   S+ FDP +D SL++                      
Sbjct: 199 KSLVHRIFGGRLRSQVKCVSCSHCSSKFDPFLDLSLEI---------------------- 236

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQK-FFCQQCQVRQESLKQMSIRKLPLVSC 438
                       +TL+  L  FT  E L   +K + CQ C+ +  + K+ +I K P V  
Sbjct: 237 ---------ANAATLVKALQNFTEEELLDDGEKQYNCQHCRQKVAAKKRFTIDKAPDVLT 287

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF   + R    K+D+ + F  +LD+ P++S+S                      +
Sbjct: 288 IHLKRFSPFNPR---HKIDKKVDFQPTLDLKPFVSNS---------------------ED 323

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+ V+ H G    AGHY  ++R S+  W+  DD  + +V E  V   + YM+FY
Sbjct: 324 MDFRYNLYGVLVHAGWNTQAGHYYCFVRTSSGMWHNLDDNQVHQVREADVLRQKAYMLFY 383

Query: 557 VQ 558
           V+
Sbjct: 384 VR 385


>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
          Length = 367

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 171/384 (44%), Gaps = 59/384 (15%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN-GVRLCLACDLDTMF 255
           GL GL NLGNT FMNS LQ L +T PL +YFL D +     +    G++  +A     + 
Sbjct: 7   GLCGLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELI 66

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR-- 313
             ++ G     +P  F     R A   + Y+QQD+ E    +LDG+HE + + + KP   
Sbjct: 67  KQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLE 126

Query: 314 ---SQGNGDCCIA------HRV---------FSGILRSDVMCMACGFTSTTFDPCVDFSL 355
              + G  D  +A      HR+         F G+ +S ++C  C   S TFDP    +L
Sbjct: 127 LKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL 186

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
            L   +   M+    +                      L  C++ FT  E LG    ++C
Sbjct: 187 PLPLKKDRVMEGPMLQPQKKKKTTV------------ALRDCIELFTTMETLGEHDPWYC 234

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSS 474
             C+  Q++ K+  +  LP +   H+KRF ++  R    K+D  ++FP+  L+M+ ++ +
Sbjct: 235 PNCKKHQQATKKFDLWSLPKILVVHLKRFSYN--RYWRDKLDTVVEFPIRGLNMSEFVCN 292

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL--RLSNKWYK 532
              R        P+              ++L AV  H G +  GHY  Y   +L+ KWY 
Sbjct: 293 LSAR--------PY-------------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYY 331

Query: 533 CDDAWITEVNENTVRAAQGYMMFY 556
            DD+ ++  +E+ +     Y++FY
Sbjct: 332 FDDSNVSLASEDQIVTKAAYVLFY 355


>gi|346326939|gb|EGX96535.1| Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Cordyceps
           militaris CM01]
          Length = 505

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 162/341 (47%), Gaps = 57/341 (16%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRG+ N G TC+ N VLQ+  H P LRN++LSD H    C     V  CL+C +D MF 
Sbjct: 146 GLRGIYNAGATCYQNVVLQSFLHNPLLRNFYLSDGHQSNECN----VPHCLSCAMDDMFQ 201

Query: 257 AIFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
             +  +    Y+ A  L  +W    +   NL + ++QDAHEFF  + + +HE+   D  K
Sbjct: 202 DFYALENTNGYTAANILSGFWISEKKAFENLVTTKEQDAHEFFQFLAEDLHER-NGDGKK 260

Query: 312 PRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
           P       C CI H+ F G +++   C  C  +S T    +D S+ L+     S+     
Sbjct: 261 PEIGSEHSCNCIIHQTFYGKMQTTTTCQNCNSSSNTVQSFLDLSVGLD-----SLAQRRN 315

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
           K             + Q     +L  CLD     E + SD+            S +  S+
Sbjct: 316 K------------KAGQKIPNLSLTDCLDE----EYIKSDK------------SRRYTSV 347

Query: 431 RKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++LP V    +KRFE+   R    + KVD  + FPL L+M PY  ++ +RSR        
Sbjct: 348 KRLPNVLSIQLKRFEYKQGRHDHAASKVDVPVHFPLQLNMLPY--TNRVRSR-------- 397

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNK 529
           D  E+  L   S  ++L +VV H G+L+ GHY +Y R+ ++
Sbjct: 398 DSRENMELQR-SCVYDLLSVVVHVGELETGHYTSYCRVGDQ 437


>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
          Length = 601

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 162/376 (43%), Gaps = 71/376 (18%)

Query: 195 PRGLR---GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR-HNRYYCQSKNGVRLCLACD 250
           PR +R   G NN+GNTCF+NS LQ L HT PL +       H+   C      + CL C 
Sbjct: 168 PRRVRVGPGFNNVGNTCFLNSALQVLVHTAPLVSALTGTHWHSERTCYLTGRSQFCLVCV 227

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE----KVE 306
           +  + +  F   R P +P  F  +  R A +     Q+D+HE    ++DG+ +     V 
Sbjct: 228 MQDLINRCFGQSRSPLTPRGFTDNLKRIAKHFRLGRQEDSHELLRFVIDGMQQHELAGVP 287

Query: 307 KDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
            D  K R     D  + HR+F G LRS V+C  CG  S TF+  +D SLD++        
Sbjct: 288 PDALKARR----DTTMIHRIFGGKLRSRVLCNKCGHASDTFESFLDLSLDIQ-------- 335

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
                                  G+  L   L RF +P+ L    K+ C+ C    E+ K
Sbjct: 336 -----------------------GLDHLRDALRRFFQPDDLRGQNKYKCEACTRMVEATK 372

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           Q +I+  P V   H+KRF       + +K+ R + F   L++  + S             
Sbjct: 373 QYTIQSPPQVLTLHLKRFT-----PLGKKIGRSIGFDEDLNLGRHTSE------------ 415

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHT-GKLDAGHYVTYLRLS-NKWYKCDDAWITEVNEN 544
               D    L      + L+ +V H  G   +GHY+ ++R S   W + DD+ ++     
Sbjct: 416 ----DHGKGL-----RYRLYGIVHHAGGGPQSGHYIAHVRDSVGSWNRMDDSHVSPSERM 466

Query: 545 TVRAAQGYMMFYVQKM 560
             +++  Y++FY + +
Sbjct: 467 PRQSSTAYVLFYARDV 482


>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
            SS1]
          Length = 1408

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 169/396 (42%), Gaps = 64/396 (16%)

Query: 192  GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR-HNRYYCQSKNGVRLCLACD 250
            GD+  G  GL NLGNTC+MN+ +Q L  T P   +F   R        +K G +  +A  
Sbjct: 1041 GDVQLGQSGLRNLGNTCYMNATMQCLSATVPFARFFTEGRWRAAVNMMNKMGTKGAIAQA 1100

Query: 251  LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK----VE 306
               +   I+ G+   +SP  F  S   +AS  A  EQ D+ EF   +LD +HE     + 
Sbjct: 1101 FAHILHEIWQGEMSFFSPISFRRSICSYASQFAGSEQHDSQEFLSWLLDALHEDLNRVIS 1160

Query: 307  KDQHKPRSQGNGDC---------------------CIAHRVFSGILRSDVMCMACGFTST 345
            K  ++   +   +                       I    F G  R+ + CM C  TST
Sbjct: 1161 KSTYEVTPEREAELEKLPQQIASEQEWRIYRMRNDSIVVDFFQGQFRNRMECMTCHKTST 1220

Query: 346  TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPE 405
            T++  ++ SL +              S H               G  TL  CLD F + E
Sbjct: 1221 TYNSFMNLSLPVP------------TSKH---------------GKITLQNCLDAFVKEE 1253

Query: 406  RLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL- 464
             +     + C  C+V +++ KQ+S+ +LP V     KRF        + K+D+++ FPL 
Sbjct: 1254 VMEKSDAWNCPNCKVLRKATKQLSLSRLPPVLLIQFKRFSFKG--PFTDKIDKHVDFPLK 1311

Query: 465  SLD----MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHY 520
             L+    M P L   + R +   ++    G++      P  +++L+AV  H G L +GHY
Sbjct: 1312 GLELTNYMPPPLPPGVDRGQAAVQY----GNDDPRQQTPPYKYDLYAVTNHFGSLSSGHY 1367

Query: 521  VTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++    +W  CDD+ IT  +   V     Y+++Y
Sbjct: 1368 TAFINSRGQWLYCDDSRITPSDAKEVVGKPAYVLYY 1403


>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 3 [Pan paniscus]
          Length = 501

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 226/530 (42%), Gaps = 84/530 (15%)

Query: 67  GVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAIHAT-----KTSSACSHEIAVD 115
            VC  +  P  + C+ C++V C      H   H     +  T     +      H + +D
Sbjct: 8   AVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKAQHTVCMD 65

Query: 116 VDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPENLRKRRRIDYRPWSPDLR 172
                 +C  C D V +      V  V  H  ++  S+   +  RKR+ ++    +  L 
Sbjct: 66  CSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSTLNSKLL 125

Query: 173 ERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---FHTPP---LRNY 226
           + +++      +  +S  +         L  +    F NS ++     F   P   LRN 
Sbjct: 126 KVNVISKCICRLHQLSLQSYSF------LFKIFFPSFXNSNIEQFCCYFKELPAVELRNG 179

Query: 227 FLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYE 286
             + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+   N   Y+
Sbjct: 180 KTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQ 238

Query: 287 QQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------AHRVFSGI 330
           QQDAHEF   +LD +H +++            Q       +  CCI         +F GI
Sbjct: 239 QQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGI 298

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
           L+++V C+ CG  S  FDP +D SLD+ P+Q  S ++                 + +N  
Sbjct: 299 LQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS----------------KNQENGP 341

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
           + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KRF  ++  
Sbjct: 342 VCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY- 400

Query: 451 KMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            +  KVD Y++FPL  LDM  YL                   E       S  ++L AVV
Sbjct: 401 -LRNKVDTYVEFPLRGLDMKCYLL------------------EPENSGPESCLYDLAAVV 441

Query: 510 THTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
            H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV+
Sbjct: 442 VHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVE 491


>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
           [Zea mays]
          Length = 591

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 65/366 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+N+GNTCF+N+ LQ + HT PL     S  H+     +K+G   C  C L        
Sbjct: 45  GLSNMGNTCFLNATLQCITHTVPLFLKLRSTDHSTPCSYNKDG--FCSFCALKEHVDESI 102

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG- 318
                  +PAKF  +  + +S+    +Q+DAHEF   +LD +H    K    P S+G G 
Sbjct: 103 QRSGSVIAPAKFRDNLRKLSSDFWPGQQEDAHEFLRCLLDNLH----KCTLDPMSKGKGS 158

Query: 319 ---DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              +  I + +F G L+S + C  CG +S TF+P +D SL+++                 
Sbjct: 159 SFDEESIVNEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEID----------------- 201

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLG-SDQKFFCQQCQVRQESLKQMSIRKLP 434
                          +  L+  L  FT+ E++G S+ K  C+ C  +    KQ+++ + P
Sbjct: 202 --------------QVDHLVDALQSFTKVEQIGDSENKLTCESCNAQVSKNKQLTLHRAP 247

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V  FH+KRF  +++     K+D+++ +PL +D+ P+                     SN
Sbjct: 248 DVIAFHLKRF--TTLDNSVEKIDKHVVYPLEVDLKPF--------------------HSN 285

Query: 495 TLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGYM 553
                  +++L+ VV H+G  + GHY   +R S + WY  +D+ +    +++    + Y+
Sbjct: 286 PDTVGGLKYDLYGVVEHSGLPNYGHYTCTIRSSPSTWYFMNDSKVDSCTDSSALNQEAYI 345

Query: 554 MFYVQK 559
           +FYV++
Sbjct: 346 LFYVRQ 351


>gi|403357049|gb|EJY78138.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
          Length = 490

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 174/382 (45%), Gaps = 75/382 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV-RLCLACDLDTMFSAI 258
           GL N+GNTCF+NS+LQ +F +P L +YFL         Q  +GV +  LA    ++   +
Sbjct: 160 GLRNIGNTCFLNSILQCIFASPYLNDYFLGQ------YQKGSGVGKARLADAYHSLIKQV 213

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP------ 312
             G     SP    Y+  + A   + Y QQDA EF   +LDG+HE++ + + KP      
Sbjct: 214 KQGHETTISPTDLKYAVSKVAPQFSGYGQQDAQEFLRFLLDGLHEELNRVRKKPAYKEMD 273

Query: 313 --------------RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
                         +     D  I   +F+G L + + C +CG+ S  FD   D S+ + 
Sbjct: 274 FDKLPADQQSEKWWQYNKERDDSIITDLFTGQLMNKIECQSCGYCSNAFDNFQDLSVSI- 332

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
           P  G  +                        G  +L  CL+ F + E + +   + C +C
Sbjct: 333 PRSGVRI-----------------------TGYKSLDECLESFIKAESMETC-GYKCSKC 368

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
           +      K+M++ + P +   H+KRF +SS+R+   KV+  +  P  +D++ Y       
Sbjct: 369 KKVDNFKKEMTLYRFPKIMVIHLKRFYNSSMRR--EKVNTTITIPQKIDLSSY------- 419

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV--TYLRLSNKWYKCDDA 536
                         SN  ++  ++++L+ +  H+G L  GHY+   +     KWY+C+D+
Sbjct: 420 -----------APHSNHESKKKAKYQLYGISHHSGTLYGGHYIGEAFNFDDGKWYQCNDS 468

Query: 537 WITEVNENTVRAAQGYMMFYVQ 558
           W+   + + + +A  Y++FYVQ
Sbjct: 469 WVKACSPD-LESASAYVLFYVQ 489


>gi|40804411|gb|AAR91701.1| deubiquitinating enzyme 3 [Homo sapiens]
 gi|162317638|gb|AAI56291.1| Deubiquitinating enzyme 3 [synthetic construct]
 gi|162319434|gb|AAI57074.1| Deubiquitinating enzyme 3 [synthetic construct]
          Length = 530

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+ N+ LQ L +TPPL NY LS  H++  CQ     + C+ C +    +   
Sbjct: 81  GLQNMGNTCYENASLQCLTYTPPLANYMLSREHSQ-TCQRP---KCCMLCTMQAHITWAL 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                 +SP   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 137 ------HSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C     TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCHGIPDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
          Length = 467

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 174/398 (43%), Gaps = 70/398 (17%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+GL  GL N GN+C++N+ LQ L HTPPL 
Sbjct: 17  PGAPELHQDEAQVVEELTANDKRSLSWESPQGLGCGLQNTGNSCYLNAALQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L       S   
Sbjct: 77  DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHTHSGDIM--KPSQIL------TSAFH 127

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFT 343
            Y+Q+DAHEF +  L+ +HE   +  H+     + D    H +F G  RS + C+ C  T
Sbjct: 128 KYQQEDAHEFLMFTLETMHESCLQ-VHRQSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGT 186

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           S T+DP +D  LD+   Q  +     T+                               +
Sbjct: 187 SDTYDPFLDVPLDISSAQSVNQALWDTE-------------------------------K 215

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
            E L  +  ++C +C+ +  + K + +   P V    +KRF   +  K+ RKV     +P
Sbjct: 216 SEELHGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVS----YP 271

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVT 522
             LD+ PYLS             P  G            + L+AV+ H G    +GHY  
Sbjct: 272 EFLDLKPYLSQ------------PTAG---------PLPYALYAVLVHDGATCHSGHYFC 310

Query: 523 YLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 311 CVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 348


>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
           caballus]
          Length = 606

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 178/397 (44%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S N   
Sbjct: 257 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSN-AH 312

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 373 EVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 431

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +                           + +     TLM C+  FT
Sbjct: 432 CSTVFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFT 464

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 465 KEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNF 522

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 523 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 560

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 561 AYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597


>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
           (Silurana) tropicalis]
          Length = 809

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 73/383 (19%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P D +S     + R   GL NLGNTCF+N+ +Q L +TPPL NY LS  H+R   QS   
Sbjct: 104 PADKLSMKWDRISRVGAGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHSRNCQQSG-- 161

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +      +F        P  F+    + A +     Q+DAHEF    +D + 
Sbjct: 162 --FCMLCIMQNHLIQVFANSGNNVKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQ 219

Query: 303 EK-----VEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           +         D+H   SQ      + H++F G LRS V C  C   S T+DP +D +L++
Sbjct: 220 KACLNGYARLDRH---SQATS---LVHQIFGGYLRSRVTCSVCKNVSDTYDPYLDIALEI 273

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
                                            +  ++  L+ F + + L  +  + C +
Sbjct: 274 R-------------------------------NVPNIVCALEMFVKSDVLSGENAYMCAR 302

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           C+ +  + K+ S+ +   V    +KRF +SS  K++++V     +P  L++ PY+S    
Sbjct: 303 CKKKVPACKRFSVHRESNVLTLSLKRFANSSGGKITKEVG----YPEFLNLRPYMS---- 354

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDD 535
             R G                    + L+AV+ H+G    AGHY  Y++ SN +WY+ +D
Sbjct: 355 -QRNGVPVM----------------YALYAVLVHSGYSCHAGHYYCYVKASNGQWYQMND 397

Query: 536 AWITEVNENTVRAAQGYMMFYVQ 558
           + +   N   V   Q Y++FY++
Sbjct: 398 SLVHASNIKVVLNQQAYVLFYLR 420


>gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus]
          Length = 1088

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 728  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 787

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 788  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 844

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 845  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 904

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 905  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 935

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 936  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 993

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL SLD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 994  LQTSVDFPLESLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1032

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1033 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1077


>gi|47230636|emb|CAF99829.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1046

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 186/435 (42%), Gaps = 116/435 (26%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +A+ I S++ S G L   L GL NLGNTC+MNS+LQ L +TP L  YF    +N YY   
Sbjct: 667  SAAKIRSLNPSFGGLGASLTGLRNLGNTCYMNSILQCLCNTPALTEYF----NNNYYMDD 722

Query: 240  KN-----GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             N     G +  +A +   +  A++ G     SP  F  +  +     A Y+QQD+ E  
Sbjct: 723  INRSNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINEQFAGYDQQDSQELL 782

Query: 295  ISMLDGIHE-------------KVEKDQHKPRSQGNGDCCIAHRV---------FSGILR 332
            + ++DG+HE             K E++ H             H++         F G  +
Sbjct: 783  LFLMDGLHEDLNKAPADNRKRYKEEENDHLDDQTAADQAWSKHKLLNESIIVALFQGQFK 842

Query: 333  SDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIS 392
            S V C+ C   S TF+  +  SL L                           S+  C   
Sbjct: 843  STVQCLTCHRKSRTFETFMYLSLPLA--------------------------STSRC--- 873

Query: 393  TLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR--------- 443
            +L  CL  F++ E+L  + K FC+ C+  ++S K++ I K+P +   H+KR         
Sbjct: 874  SLQDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRSVPLVLYAF 933

Query: 444  -------------------FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGN 483
                               +E    +K+   VD    FPL SLD+A Y+         G 
Sbjct: 934  VCVFFSCKNKISIFLCRFSYEGRWKQKLQTSVD----FPLDSLDLAQYV--------IGP 981

Query: 484  RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEV 541
            +         ++L      + L+ V  H G LD GHY  Y +  L  +WYK DD  ++++
Sbjct: 982  K---------HSLKR----YSLYGVSNHYGGLDGGHYTAYCKSVLKQRWYKFDDHEVSDI 1028

Query: 542  NENTVRAAQGYMMFY 556
            + ++V+++  Y++FY
Sbjct: 1029 STSSVKSSAAYILFY 1043


>gi|38014646|gb|AAH60390.1| Usp36 protein [Xenopus laevis]
          Length = 715

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 168/383 (43%), Gaps = 73/383 (19%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P D +S     + R   GL NLGNTCF+N+ +Q L +TPPL NY LS  H    CQ    
Sbjct: 104 PADKLSMKWDRISRVGAGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHTS-NCQQSG- 161

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +      +F        P  F+    R A +     Q+DAHEF    +D + 
Sbjct: 162 --FCMLCIMQNHLIQVFANSGNNVKPVSFIRELKRIARHFRFGSQEDAHEFLRYTIDAMQ 219

Query: 303 EK-----VEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
           +         D+H   SQ      + H++F G LRS V C  C   S T+DP +D +L++
Sbjct: 220 KACLNGYARLDRH---SQATS---LVHQIFGGYLRSRVTCSICKNVSDTYDPYLDIALEI 273

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
                                            +  ++  L+ F + + L  +  + C +
Sbjct: 274 R-------------------------------NVPNIVCALEMFVKSDILSGENAYMCAR 302

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSIL 477
           C+ +  + K+ S+ +   V    +KRF +SS  K++++V     +P  L++ PY+S    
Sbjct: 303 CKKKVPASKRFSVHRDSNVLTLSLKRFANSSGGKITKEVG----YPEFLNLRPYMS---- 354

Query: 478 RSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDD 535
             R GN                   + L+AV+ H+G    AGHY  Y++ SN +W++ +D
Sbjct: 355 -QRNGNPVM----------------YALYAVLVHSGYSCHAGHYYCYVKASNGQWFQMND 397

Query: 536 AWITEVNENTVRAAQGYMMFYVQ 558
           + +   N   V   Q Y++FY++
Sbjct: 398 SLVHASNIKVVLNQQAYVLFYLR 420


>gi|2894598|emb|CAA17132.1| putative protein [Arabidopsis thaliana]
 gi|7268541|emb|CAB78791.1| putative protein [Arabidopsis thaliana]
          Length = 1082

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 172/362 (47%), Gaps = 64/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGN+CF+NSV Q   HT PL    LS R+    C   N    C+   +     A  
Sbjct: 564 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRY-EVPCHCGNEF-FCVIRAIRYHIEAAL 621

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
             +R P +P  F  +    + +   Y+Q+DAHEF  + L+ + E    D    R+   GD
Sbjct: 622 RPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKL-EICGSD----RTSFRGD 676

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
              +  VFSG L S + C  C + S T++  V  SL++E                     
Sbjct: 677 IT-SQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIE--------------------- 714

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      + TL   L+ FTR E+L  D++  C  C  +    KQ+ + KLPLV+ F
Sbjct: 715 ----------DVDTLGSALESFTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATF 762

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           H+KRF+++ +     K+ ++++ PL +D+ PY+                    +   NE 
Sbjct: 763 HLKRFKNNGL--YMEKIYKHVKIPLEIDLQPYM-------------------RNIQENEV 801

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYV 557
           S+++ L+A+V H G  +  GHY +Y+R + K W+  DD+ +T ++E+ V +   Y++FY 
Sbjct: 802 STKYHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFYA 861

Query: 558 QK 559
           ++
Sbjct: 862 RE 863


>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
           [Coccomyxa subellipsoidea C-169]
          Length = 380

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 175/382 (45%), Gaps = 72/382 (18%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR-YYCQSKNGVRLCLACDLDTMF 255
           GL GL+NLGNTCFMNS +Q L H  PL   FL+  + R     +  G +  LA    ++ 
Sbjct: 1   GLAGLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLM 60

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR-- 313
             ++ G     SP  F  +  R A     Y QQD+ E    +LDG+HE + + + KP   
Sbjct: 61  KLLWQGGVGSVSPKGFKAALARFAPQFGGYSQQDSQELLAFLLDGLHEDLNRVRQKPYVE 120

Query: 314 ---SQGNGDCCIAHRV---------------FSGILRSDVMCMACGFTSTTFDPCVDFSL 355
              ++G  D  +A                  F G+ +S ++C  C F+S  FDP +  SL
Sbjct: 121 EADAEGRPDKVVAAEAWDNYRKRNDSVVVDHFQGLYKSTLVCPQCSFSSVKFDPFMYLSL 180

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
            L         +S T++ +                    +  +  F +PE+L +   ++C
Sbjct: 181 PL--------PSSKTRTLY--------------------ITLIYAFLQPEQLDAADSWYC 212

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSS 475
            +C+    + K++ +  LP +   H+KRF +S  R    K+D  + FPLS   A  LSS 
Sbjct: 213 GRCKEHVRAEKKLDLWSLPELLVVHLKRFSYS--RHSRDKLDAPVHFPLS---ALDLSSF 267

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKC-D 534
           +LR +                 + +  ++L+AV  H G L  GHY  Y R+ +  + C D
Sbjct: 268 LLREQ-----------------DVAPVYDLYAVSNHFGGLGGGHYTAYCRMDDDGWHCFD 310

Query: 535 DAWITEVNENTVRAAQGYMMFY 556
           D+ ++  +E++V++   Y++FY
Sbjct: 311 DSHVSPADESSVQSKAAYLLFY 332


>gi|241952340|ref|XP_002418892.1| deubiquitinating enzyme, putative; ubiquitin carboxyl-terminal
           hydrolase, putative; ubiquitin thioesterase, putative;
           ubiquitin-specific protease, putative;
           ubiquitin-specific-processing protease, putative
           [Candida dubliniensis CD36]
 gi|223642231|emb|CAX44198.1| deubiquitinating enzyme, putative [Candida dubliniensis CD36]
          Length = 581

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/591 (21%), Positives = 237/591 (40%), Gaps = 137/591 (23%)

Query: 23  CPHL-ADFHARNGTKPFRAIQDCLHIKPPGGRA-AIRRDSSEVP------------RCGV 68
           C H+ +   ++  T  F   +  + I  P  ++  +++D S +P            +C  
Sbjct: 71  CNHIDSVLRSKAKTTVFETYRQAVLISQPLIKSYKLKKDGSIIPIKKLIMSKISALKCSQ 130

Query: 69  CGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRD 128
           C  ++      C+ C  V C    ++     H+     +  H  ++D     L+C  C D
Sbjct: 131 CHLNNFNNSMICLQCPHVGCCFNDYN-----HSYSHYKSTKHMFSIDSSCGLLYCFKCND 185

Query: 129 QVYDRDFDAA---VVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPID 185
            +   + +     ++L    +I      EN+  +   D   +        +  N   P  
Sbjct: 186 FINHPELEKIRLQIILGDDDNI------ENINDKNNKDMNNF--------IKQNYVDP-- 229

Query: 186 SMSSSNGDLP-RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS----- 239
                 G +  +GL+G  NLG TCFM+S+LQ L H P ++  F ++  + + C+      
Sbjct: 230 ------GKIAIKGLKGFINLGATCFMSSILQTLIHNPLIKYQFFNNDLHYFNCEKIHNQF 283

Query: 240 -KNGV----RLCLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEF 293
             NG       C+ C +D +F + +       +     L + W    +LA +E+QDAHEF
Sbjct: 284 INNGNIDENNACITCSIDNIFQSFYTSTTNEGFGMTNLLTTAWYKQKSLAGFEEQDAHEF 343

Query: 294 FISMLDGIHE---------KVEKDQHKPRSQG-------NGDCCIAHRVFSGILRSDVMC 337
           +  +L+  H          K EK  +  ++ G       N   CI H  FS  L+S + C
Sbjct: 344 WQFLLNEFHMDYQRIIMNLKNEKLSNISKNDGLESVINSNSCGCIMHSTFSFELQSCIKC 403

Query: 338 MACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGC 397
            +C   + T DP +D SL++                                  + L   
Sbjct: 404 NSCESITETVDPMIDLSLEV--------------------------------NFTNLYQS 431

Query: 398 LDRFTRPERLGS----------DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
           L  FTR E+L                       +  ++K++ ++ LP +    +KRF H 
Sbjct: 432 LQSFTRDEKLDDYNCKNCNTTTTTTNNNNNGNSKTSAIKKLRLKTLPQILSIQLKRFRHD 491

Query: 448 SVRKM-SRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELF 506
           ++    + K+  ++ FPL L++  Y                      + +N+    ++LF
Sbjct: 492 TLGSFQATKIQSHIDFPLFLNVTEY----------------------SVINDTDYIYQLF 529

Query: 507 AVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           AVV H G ++ GHY  +++ +  WYK DD+ +T V+++ V  ++ Y+++Y+
Sbjct: 530 AVVVHQGSINTGHYTVFIKNNGNWYKFDDSVVTMVSQDDVINSEAYLLYYI 580


>gi|255086819|ref|XP_002509376.1| predicted protein [Micromonas sp. RCC299]
 gi|226524654|gb|ACO70634.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 168/377 (44%), Gaps = 76/377 (20%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCFMN+V+Q L HTP L  + L   H R+        R          FSAI+
Sbjct: 64  GLANLGNTCFMNAVMQCLTHTPALAAFCLDGEHRRF--------RPKGGNGGGGSFSAIY 115

Query: 260 ----------CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK-VEKD 308
                      G+R   SP+ F+ +    +       Q+DAHEF   +LD +HEK VE  
Sbjct: 116 EMGEHVCRALAGERRVVSPSAFVKNLRSISKTFRKGRQEDAHEFARCLLDAMHEKCVEHA 175

Query: 309 QHK-PRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
           + K P++    +     +VF G LRS V C  CG  S TFD  +D SLD+   +      
Sbjct: 176 RPKPPKNSPRAETTFVFQVFGGRLRSQVTCKTCGRKSDTFDSFMDLSLDIAKAK------ 229

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR---QES 424
                                    ++   L R+   E L    K+ C+    +     +
Sbjct: 230 -------------------------SVEAALKRYVAVEVLDGSNKYKCEMGGGKPHMTRA 264

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            KQ +I   PLV    +KRFE+    +   K+ +++++P SLD+   +S +  ++R    
Sbjct: 265 TKQFTIDAAPLVLTVQLKRFEYVPFGR--GKLTQFVEYPTSLDITGAMSDANPKAR---- 318

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHT-GKLDAGHYVTYLRLSNK-WYKCDDAWITEVN 542
                G E         ++ LFAV+ H  G + +GHY  Y++ +   WY+ DD  ++  +
Sbjct: 319 -----GVE---------KYSLFAVLVHAGGSMHSGHYYCYVKAATGVWYEMDDEGVSATS 364

Query: 543 ENTVRAAQGYMMFYVQK 559
           E T    + Y++FY ++
Sbjct: 365 ERTALNQKAYLLFYARE 381


>gi|149408831|ref|XP_001507996.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
            [Ornithorhynchus anatinus]
          Length = 1116

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 189/409 (46%), Gaps = 90/409 (22%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF    +  +Y + 
Sbjct: 756  SASQIRNLNPVFGGAGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF----NRNFYQED 811

Query: 240  KN-----GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             N     G +  +A +   +  A++ G     SP  F  +  +     + Y QQD+ E  
Sbjct: 812  INRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELL 871

Query: 295  ISMLDGIHEKVEK----DQHKPRSQGNGDCCIA-------HR---------VFSGILRSD 334
            + ++DG+HE + K     +HK  +  + D C A       H+         +F G  +S 
Sbjct: 872  LFLMDGLHEDLNKADNRKRHKEENNDHLDDCRAAELAWHKHKQLNESIIVALFQGQFKST 931

Query: 335  VMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
            V C+ C   S TF+  +  SL L                           S+  C   +L
Sbjct: 932  VQCLTCHKRSRTFEAFMYLSLPLA--------------------------STSKC---SL 962

Query: 395  MGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
              CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +
Sbjct: 963  QDCLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYEG--RWKQ 1020

Query: 455  KVDRYLQFPL-SLDMAPYL---SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVT 510
            K+   + FPL SLD++ Y+    SS+ R                        + LF+V  
Sbjct: 1021 KLQTSVDFPLESLDLSQYVIGSKSSLKR------------------------YNLFSVSN 1056

Query: 511  HTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            H G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1057 HYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1105


>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
           harrisii]
          Length = 1142

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 167/378 (44%), Gaps = 63/378 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P+D +S     + R   GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q    
Sbjct: 106 PMDRLSLKWERIYRVGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGG-- 163

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +       F        P  F+    + A +     Q+DAHEF   ++D + 
Sbjct: 164 --FCMLCVMQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIIDAMQ 221

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +       K   Q      + H++F G LRS V C  C   S T+DP +D +L++     
Sbjct: 222 KACLNGYTKLDRQTQA-TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR---- 276

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        + ++  L+ F +P+ L  +  + C +C+ + 
Sbjct: 277 ---------------------------QAANIVRALELFVKPDVLSGENAYMCAKCKKKV 309

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ +I +   V    +KRF + S  K+++ V     +P  L++ PY+S S       
Sbjct: 310 PASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS------- 358

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITE 540
                 +GD           + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +  
Sbjct: 359 ------NGD--------PIMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHS 404

Query: 541 VNENTVRAAQGYMMFYVQ 558
            N   V   Q Y++FY++
Sbjct: 405 SNIKVVLNQQAYVLFYLR 422


>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
          Length = 823

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 170/394 (43%), Gaps = 89/394 (22%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GL GL N+GNTCFMNSV+Q L +T PL  Y L    N  Y    N     +   L   FS
Sbjct: 482 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLL----NEQYLTDINTTTSSMKGALIKAFS 537

Query: 257 AIFC------GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
            +        GD +  + +       R A     Y QQDA EF   +L+G+HE V +   
Sbjct: 538 QVIQELWENDGDHV-VNTSSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTV 596

Query: 311 KP----------------------RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
           KP                      R   + D  I   VF G LRS + C  C   S T D
Sbjct: 597 KPQPIHTDIPDSYSDSMKAAESWKRYLRSEDSTIVD-VFVGQLRSSLRCTVCDHVSVTLD 655

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P  D SL + P++  +++                           L  CL+ FTR E L 
Sbjct: 656 PFWDLSLPI-PSRSGTVR---------------------------LNQCLEHFTREEVLD 687

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LD 467
            D+K  C +CQ+R++  K  +I+K P +   H+KRF  S + +   K+   + FPL+ L+
Sbjct: 688 GDEKPTCSKCQMRRKCTKSFAIQKFPKILVIHLKRF--SPMERFRGKLSVLVDFPLTGLE 745

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-- 525
           ++ + +  +                          + L+ V  H+G   +GHY  Y +  
Sbjct: 746 LSAFAAPRV----------------------QGCTYNLYGVANHSGTTHSGHYTAYCKHP 783

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            S +W++ +D+ +T V+  +V +++ Y++FY Q+
Sbjct: 784 YSGEWHEYNDSRVTPVSARSVVSSEAYVLFYEQQ 817


>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
           lupus familiaris]
          Length = 606

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 178/397 (44%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S N V 
Sbjct: 257 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSN-VH 312

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 373 EVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 431

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +                           + +     TL  C+  FT
Sbjct: 432 CSTVFDPFWDLSLPI---------------------------AKRGYPEVTLTDCMRLFT 464

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 465 KEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNF 522

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 523 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 560

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 561 AYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597


>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Nomascus leucogenys]
          Length = 529

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H+    Q+ +  + C+ C +    +   
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHS----QTCHRHKCCMLCTMQAHIT--- 133

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF +  +D +  K     HK     + D
Sbjct: 134 ---RALHRPGDVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-RKACLPGHKQVDPHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  +  + K +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T     +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK    + SE
Sbjct: 374 QKSELERHSE 383


>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like isoform 1 [Nomascus leucogenys]
 gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Nomascus leucogenys]
 gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like isoform 2 [Nomascus leucogenys]
          Length = 529

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H+    Q+ +  + C+ C +    +   
Sbjct: 81  GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHS----QTCHRHKCCMLCTMQAHIT--- 133

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF +  +D +  K     HK     + D
Sbjct: 134 ---RALHRPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-RKACLPGHKQVDPHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  +  + K +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T     +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK    + SE
Sbjct: 374 QKSELERHSE 383


>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
 gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
           musculus]
          Length = 541

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 174/398 (43%), Gaps = 70/398 (17%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+GL  GL N GN+C++N+ LQ L HTPPL 
Sbjct: 51  PGAPELHQDEAQVVEELTANDKRSLSWESPQGLGCGLQNTGNSCYLNAALQCLTHTPPLA 110

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L       S   
Sbjct: 111 DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHTHSGDIM--KPSQIL------TSAFH 161

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFT 343
            Y+Q+DAHEF +  L+ +HE   +  H+     + D    H +F G  RS + C+ C  T
Sbjct: 162 KYQQEDAHEFLMFTLETMHESCLQ-VHRQSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGT 220

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           S T+DP +D  LD+   Q  +     T+                               +
Sbjct: 221 SDTYDPFLDVPLDISSAQSVNQALWDTE-------------------------------K 249

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
            E L  +  ++C +C+ +  + K + +   P V    +KRF   +  K+ RKV     +P
Sbjct: 250 SEELHGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVS----YP 305

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVT 522
             LD+ PYLS             P  G            + L+AV+ H G    +GHY  
Sbjct: 306 EFLDLKPYLSQ------------PTAG---------PLPYALYAVLVHDGATCHSGHYFC 344

Query: 523 YLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 345 CVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 382


>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
           boliviensis boliviensis]
          Length = 606

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 187/425 (44%), Gaps = 88/425 (20%)

Query: 164 YRP------WSPDLRERSLMVNNASP-IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQA 216
           YRP      W     + S    ++SP  DSM+S +    +GL GL NLGNTCFMNS+LQ 
Sbjct: 229 YRPIGRYTLWEKGKGQASGPTRSSSPGRDSMNSKSA---QGLAGLRNLGNTCFMNSILQC 285

Query: 217 LFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD-RMPYSPAKFLYSW 275
           L +T  LR+Y L   + R    S N     L  +   +   I+        SP++F    
Sbjct: 286 LSNTRELRDYCLQRLYVRDLHHSSN-AHTALVEEFAKLIQTIWTSSPNDVVSPSEFKTQI 344

Query: 276 WRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG----------------- 318
            R+A     Y QQDA EF   +LDG+H +V +   +P+S                     
Sbjct: 345 QRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPKSNPENLDHLPDDEKGRQMWRKY 404

Query: 319 ----DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               D  I   +F G L+S + C  CG+ ST FDP  D SL +                 
Sbjct: 405 LEREDSRIGD-LFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPI----------------- 446

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                     + +     TLM C+  FT+ + L  D+K  C +C+ R+  +K+ SI++ P
Sbjct: 447 ----------AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFP 496

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDES 493
            +   H+KRF  S +R  + K+  ++ FPL  LD+  + S                    
Sbjct: 497 KILVLHLKRFSESRIR--TSKLTTFVNFPLRDLDLREFASE------------------- 535

Query: 494 NTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL--SNKWYKCDDAWITEVNENTVRAAQG 551
              N   + + L+AV  H+G    GHY  Y R   + +W+  +D+ +T ++ + VR +  
Sbjct: 536 ---NTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDA 592

Query: 552 YMMFY 556
           Y++FY
Sbjct: 593 YLLFY 597


>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
          Length = 540

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 174/398 (43%), Gaps = 70/398 (17%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+GL  GL N GN+C++N+ LQ L HTPPL 
Sbjct: 50  PGAPELHQDEAQVVEELTANDKRSLSWESPQGLGCGLQNTGNSCYLNAALQCLTHTPPLA 109

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L       S   
Sbjct: 110 DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHTHSGDIM--KPSQIL------TSAFH 160

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFT 343
            Y+Q+DAHEF +  L+ +HE   +  H+     + D    H +F G  RS + C+ C  T
Sbjct: 161 KYQQEDAHEFLMFTLETMHESCLQ-VHRQSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGT 219

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           S T+DP +D  LD+   Q  +     T+                               +
Sbjct: 220 SDTYDPFLDVPLDISSAQSVNQALWDTE-------------------------------K 248

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
            E L  +  ++C +C+ +  + K + +   P V    +KRF   +  K+ RKV     +P
Sbjct: 249 SEELHGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVS----YP 304

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVT 522
             LD+ PYLS             P  G            + L+AV+ H G    +GHY  
Sbjct: 305 EFLDLKPYLSQ------------PTAG---------PLPYALYAVLVHDGATCHSGHYFC 343

Query: 523 YLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 344 CVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 381


>gi|149042015|gb|EDL95856.1| rCG58374 [Rattus norvegicus]
          Length = 471

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 223/539 (41%), Gaps = 123/539 (22%)

Query: 56  IRRDSSEVPR-------CGVCGDSSCPRLYACMACAAVSC------HVPPHSSHVAI--- 99
           I  DS++ P        C VC  +  P  + C+ C++V C      H   H     I   
Sbjct: 12  IAPDSAKFPNGSPSSWCCSVCRSNKSP--WVCLTCSSVHCGRYVNGHAKKHYEDAQIPLL 69

Query: 100 --HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAV--VLAHTTSIIQSS-KPE 154
               ++      H + +D      +C  C D V +      V  V  H  ++  S+   +
Sbjct: 70  NHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTAD 129

Query: 155 NLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVL 214
             RKR+ ++    +  L  + L VN ++     +           GL NLGNTCFMN++L
Sbjct: 130 RHRKRKLLE----NSSLNSKLLKVNGSTAAICAT-----------GLRNLGNTCFMNAIL 174

Query: 215 QAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD 262
           Q+L         F   P   LRN   + R   Y+ +S+    + L  +      A++ G 
Sbjct: 175 QSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDSNVSLVEEFRKTLCALWQGS 233

Query: 263 RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCI 322
           +  +SP    Y  W+   N                                   NG   +
Sbjct: 234 QTAFSPESLFYVVWKIMPNFR---------------------------------NGASTV 260

Query: 323 AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADG 382
              +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  S ++               
Sbjct: 261 VTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRSKRS--------------- 304

Query: 383 MNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIK 442
             + +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP   C H+K
Sbjct: 305 -KNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLK 363

Query: 443 RFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSS 501
           RF  ++   +  KVD Y+QFPL  LDM  YL                   E       S 
Sbjct: 364 RFHWTAY--LRNKVDTYVQFPLRGLDMKCYLL------------------EPENSGPDSC 403

Query: 502 EFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            ++L AVV H G  + +GHY  Y     +W+  +D+ +T  +E TV  A+ Y++FYV++
Sbjct: 404 LYDLAAVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETVGKAKAYILFYVER 462


>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
           domestica]
          Length = 1133

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 167/378 (44%), Gaps = 63/378 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P++ +S     + R   GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q    
Sbjct: 106 PVERLSLKWERIYRVGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGG-- 163

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +       F        P  F+    + A +     Q+DAHEF   ++D + 
Sbjct: 164 --FCMLCVMQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIIDAMQ 221

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +       K   Q      + H++F G LRS V C  C   S T+DP +D +L++     
Sbjct: 222 KACLNGYTKLDRQTQA-TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR---- 276

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        + ++  L+ F +P+ L  +  + C +C+ + 
Sbjct: 277 ---------------------------QAANIVRALELFVKPDVLSGENAYMCAKCKKKV 309

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ +I +   V    +KRF + S  K+++ V     +P  L++ PY+S S       
Sbjct: 310 PASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS------- 358

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITE 540
                 +GD           + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +  
Sbjct: 359 ------NGD--------PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHS 404

Query: 541 VNENTVRAAQGYMMFYVQ 558
            N   V   Q Y++FY++
Sbjct: 405 SNIKVVLNQQAYVLFYLR 422


>gi|195352190|ref|XP_002042597.1| GM14931 [Drosophila sechellia]
 gi|194124481|gb|EDW46524.1| GM14931 [Drosophila sechellia]
          Length = 280

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 132/246 (53%), Gaps = 31/246 (12%)

Query: 54  AAIRRDSSEVP----RCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS 109
           A + RD+ E       C  CG S   +LYAC+ C    C     +SH+         +  
Sbjct: 30  ACVNRDARERKAIHCNCFECG-SYGIQLYACLHCIYFGCRGAHITSHL--------RSKK 80

Query: 110 HEIAVDVDRAELFCCACRDQVYD-RDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWS 168
           H +A+++    L+C ACRD +YD R  + A++         + K E    ++ I + PW 
Sbjct: 81  HNVALELSHGTLYCYACRDFIYDARSREYALI---------NRKLEAKDLQKSIGWVPWV 131

Query: 169 PDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           P  +E +L++ NA     +   N  +  GLRGL NLG TCFMN ++QAL HTP L +YF+
Sbjct: 132 PTTKETNLLLANARR--RLVRPNQTI--GLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 187

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           SDRH+   C SK+  + CL C++  +F   + G R P S  + L+  W HA +LA YEQQ
Sbjct: 188 SDRHD---CGSKSSHK-CLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQ 243

Query: 289 DAHEFF 294
           DAHEFF
Sbjct: 244 DAHEFF 249


>gi|378925630|ref|NP_001243781.1| ubiquitin specific peptidase 17-like family member 10 [Homo
           sapiens]
 gi|449061953|sp|C9JJH3.1|U17LA_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           10
          Length = 530

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L + PPL NY L   H++  C    G  LC      TM + I 
Sbjct: 81  GLQNMGNTCYVNASLQCLTYKPPLANYMLFREHSQ-TCHRHKGCMLC------TMQAHI- 132

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  + P   +      A+     +Q+DAHEF +  +D +  K     HK   + + D
Sbjct: 133 --TRALHIPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-RKACLPGHKQVDRHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  + K +++     V   
Sbjct: 232 -------------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHNSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFPDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYSSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
           anubis]
          Length = 351

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 176/380 (46%), Gaps = 68/380 (17%)

Query: 210 MNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           MN++LQ+L         F   P   LRN   + R   Y+ +S+    + L  +      A
Sbjct: 1   MNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCA 59

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD--------- 308
           ++ G +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++           
Sbjct: 60  LWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAI 119

Query: 309 -QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
            Q       +  CCI         +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q
Sbjct: 120 LQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQ 178

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
             S ++ + ++   C                 +  CL  FT  E L   + + C +C+ +
Sbjct: 179 FRSKRSKNQENGPVC----------------WVRDCLRSFTDLEELDETELYMCHKCKKK 222

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSR 480
           Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  YL        
Sbjct: 223 QKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKCYLL------- 273

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWIT 539
                      E       S  ++L AVV H G  + +GHY  Y     +W+  +D+ +T
Sbjct: 274 -----------EPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVT 322

Query: 540 EVNENTVRAAQGYMMFYVQK 559
             +E TV  A+ Y++FYV++
Sbjct: 323 LTDEETVVKAKAYILFYVER 342


>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
           [Taeniopygia guttata]
          Length = 1282

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 166/362 (45%), Gaps = 63/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NS LQ L +TPPL NY LS  H +  C  +     C+ C +++  + + 
Sbjct: 108 GLQNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTK-SCHVEG---FCMMCTMESHINQVL 163

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
           C       P   +    R   +     Q+DAHEF    +D + +       K        
Sbjct: 164 CCSNNAIKPTSVINGLKRIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQAT 223

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             I +++F G LRS V C+ C   S T++P +D +LD++                     
Sbjct: 224 TLI-YQIFGGYLRSRVKCLNCKAVSDTYEPFLDVTLDIK--------------------- 261

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      ++++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 262 ----------AVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRYTIHRSSNVLTI 311

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+  Y+S SI                     EP
Sbjct: 312 SLKRFANFTGGKINKDV----KYPEYLDLRAYMSQSI--------------------GEP 347

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G   +AGHY+ +++  N  WY+ +DA +   +  TV   Q Y++FY+
Sbjct: 348 LI-YALYAVLVHSGFNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYI 406

Query: 558 QK 559
           ++
Sbjct: 407 RR 408


>gi|119613077|gb|EAW92671.1| hCG1807742 [Homo sapiens]
          Length = 314

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 164/366 (44%), Gaps = 69/366 (18%)

Query: 204 LGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR 263
           +GNTC++N+ LQ L +TPPL NY LS  H++  C    G  LC      TM + I    R
Sbjct: 1   MGNTCYVNASLQCLTYTPPLANYMLSREHSQT-CHRHKGCMLC------TMQAHI---TR 50

Query: 264 MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIA 323
             ++P   +      A+     +Q+DAHEF +  +D + +K     HK     + D  + 
Sbjct: 51  ALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKDTTLI 109

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
           H++F G  RS + C+ C   S TFDP +D +LD++  Q                      
Sbjct: 110 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ---------------------- 147

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                    ++   L++  +PE L  +  + C  C  R  + K +++     V    +KR
Sbjct: 148 ---------SVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKR 198

Query: 444 FEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEF 503
           F   +  K+++ V    Q+P  LDM PY+S                       N     +
Sbjct: 199 FSDVTGNKIAKNV----QYPECLDMQPYMSQQ---------------------NTGPLVY 233

Query: 504 ELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+QK  
Sbjct: 234 VLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSE 293

Query: 562 YYKASE 567
           + + SE
Sbjct: 294 WERHSE 299


>gi|255573501|ref|XP_002527676.1| conserved hypothetical protein [Ricinus communis]
 gi|223532981|gb|EEF34747.1| conserved hypothetical protein [Ricinus communis]
          Length = 753

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 167/370 (45%), Gaps = 57/370 (15%)

Query: 194 LPRGLR-GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR-LCLACDL 251
           +P G+  GL NLGNTCF+N+VLQ+  HT PL     S  H    CQ   GV   C  C L
Sbjct: 174 VPTGVAAGLYNLGNTCFINAVLQSFTHTVPLVKALRSCNH-VMPCQ--RGVEGFCAVCAL 230

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
                          SP+K + +  + +S    Y+Q+DAHEF   +LD +          
Sbjct: 231 RDHIELSLTSSGKAVSPSKIVDNLKQISSCFEKYQQEDAHEFLQCLLDKLERCCLDPGLS 290

Query: 312 PRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
             +  + +  I  RVF G L S + C  CG  S  ++P +D SL++E             
Sbjct: 291 DEASSSPENNIVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIE------------- 337

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS-DQKFFCQQCQVRQESLKQMSI 430
                              +  L   L+ FT+ E++   D KF C  C+      KQ+ +
Sbjct: 338 ------------------DVGNLQSALESFTKVEKIEDVDSKFICNHCKEEGSREKQLML 379

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
            + P VS  H+KRF+         K+D++++FPL L++ PY  SS               
Sbjct: 380 DQAPSVSALHLKRFKTDG--SFIEKIDKHVEFPLELNLKPYTKSS--------------- 422

Query: 491 DESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRA 548
            +    N+   +++L+A+V H G    +GHY  ++R S + W+K DD  + +V E  V +
Sbjct: 423 -QDCNKNQVDLKYQLYAIVVHNGLSPTSGHYFCFVRSSPSTWHKLDDCRVVKVEEEEVLS 481

Query: 549 AQGYMMFYVQ 558
              Y++FYV+
Sbjct: 482 QAAYILFYVR 491


>gi|395822737|ref|XP_003784667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Otolemur
            garnettii]
          Length = 1087

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 727  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 786

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 787  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 843

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 844  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEQAWQKHKQLNESIIVALFQGQFKSTV 903

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 904  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 934

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 935  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 992

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 993  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1031

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  ++E++ ++V+++  Y++FY 
Sbjct: 1032 LDGGHYTAYCKNAARQRWFKFDDHEVSEISVSSVKSSAAYILFYT 1076


>gi|18414985|ref|NP_567544.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
 gi|75262803|sp|Q9FPS7.1|UBP20_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
           Full=Deubiquitinating enzyme 20; Short=AtUBP20; AltName:
           Full=Ubiquitin thioesterase 20; AltName:
           Full=Ubiquitin-specific-processing protease 20
 gi|11993480|gb|AAG42758.1|AF302668_1 ubiquitin-specific protease 20 [Arabidopsis thaliana]
 gi|332658563|gb|AEE83963.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
          Length = 695

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 172/362 (47%), Gaps = 64/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGN+CF+NSV Q   HT PL    LS R+    C   N    C+   +     A  
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRY-EVPCHCGNEF-FCVIRAIRYHIEAAL 234

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
             +R P +P  F  +    + +   Y+Q+DAHEF  + L+ + E    D    R+   GD
Sbjct: 235 RPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKL-EICGSD----RTSFRGD 289

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
              +  VFSG L S + C  C + S T++  V  SL++E                     
Sbjct: 290 IT-SQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIE--------------------- 327

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      + TL   L+ FTR E+L  D++  C  C  +    KQ+ + KLPLV+ F
Sbjct: 328 ----------DVDTLGSALESFTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATF 375

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           H+KRF+++ +     K+ ++++ PL +D+ PY+ +                      NE 
Sbjct: 376 HLKRFKNNGL--YMEKIYKHVKIPLEIDLQPYMRNI-------------------QENEV 414

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYV 557
           S+++ L+A+V H G  +  GHY +Y+R + K W+  DD+ +T ++E+ V +   Y++FY 
Sbjct: 415 STKYHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFYA 474

Query: 558 QK 559
           ++
Sbjct: 475 RE 476


>gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
            [Nomascus leucogenys]
 gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
            [Nomascus leucogenys]
 gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
            [Nomascus leucogenys]
          Length = 1117

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 757  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 816

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 817  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 873

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 874  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 933

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 934  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 964

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 965  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1022

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1023 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1061

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1062 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1106


>gi|441615298|ref|XP_004088287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Nomascus
            leucogenys]
          Length = 1011

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 651  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 710

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 711  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 767

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 768  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 827

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 828  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 858

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 859  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 916

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 917  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 955

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 956  LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1000


>gi|348572270|ref|XP_003471916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cavia
            porcellus]
          Length = 1077

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 717  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 776

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 777  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 833

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 834  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 893

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 894  QCLTCHRKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 924

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 925  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 982

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 983  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1021

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1022 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1066


>gi|68533556|gb|AAH98528.1| Usp36 protein [Danio rerio]
          Length = 914

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R   QS      C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSG----FCMICVMQNHIIQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ ++ +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|397565680|gb|EJK44726.1| hypothetical protein THAOC_36712, partial [Thalassiosira oceanica]
          Length = 977

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 175/404 (43%), Gaps = 66/404 (16%)

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR-HNRYYC 237
           ++ SP     +++  L R   GL NL NTCFMNS LQ L HT PLR+YFLS R  +    
Sbjct: 223 SDTSPAIGQQAASLVLNRRTTGLGNLVNTCFMNSTLQCLAHTTPLRDYFLSGRFRDDLNT 282

Query: 238 QSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
            +  G    L  +  ++ + ++ GD     P  F     +HA     ++Q D+ E  I +
Sbjct: 283 DNPLGTGGELTREFASLLTEMWKGDDTTI-PILFKTVLGKHADQFFGHDQHDSQELAIYL 341

Query: 298 LDGIHEK----------VEKDQHKPRSQG------------NGDCCIAHRVFSGILRSDV 335
           LD +HE           +E  +  P                  +    H  F G ++S +
Sbjct: 342 LDAVHEDTNLVRDKLHYIENPELGPEVSDVVASETAWADHLKRNVSFIHNHFMGQIKSRL 401

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C     TSTTFDP +  S+ + P  G+         N+  N               TLM
Sbjct: 402 ECPFTKNTSTTFDPTMYLSVPI-PRGGN--------GNYPNNV--------------TLM 438

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            C+ ++   E+L   + ++C +C+    + K++S+ + P +   H+KRF  SS  ++  K
Sbjct: 439 DCIYKYCEREQLDDSEPWYCSKCKDHVRAWKKISVYRTPPILIIHLKRFHVSSETQLRVK 498

Query: 456 VDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL 515
           +D  + FPL                 G     F G E     EP   ++ +AV  H G L
Sbjct: 499 IDTLVNFPL----------------VGLDLRNFVGHEEENGIEPV--YDCYAVSNHFGGL 540

Query: 516 DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
             GH   Y +  +  W   DD  +TE+NEN V + + Y++FY++
Sbjct: 541 GGGHCTAYCKEDDGTWSNYDDWRVTEINENEVVSPEAYVLFYIR 584


>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
 gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
          Length = 626

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 155/636 (24%), Positives = 244/636 (38%), Gaps = 136/636 (21%)

Query: 23  CPHLADFHA--RNGTKPFRA---IQDCLHIKPPGGRAAIRRDSSEVPRCGVCGDSSCPRL 77
           CPH+ D  A  ++  +  +    +       PP            + +   C + S    
Sbjct: 3   CPHIGDNVALRKDAVRNLKMAVCVPPSAATVPPETGTPPATSPVAISKLWKCAECSGKDN 62

Query: 78  YACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCAC----------- 126
           + C+ C +V C       + + HA K S+  +H I ++     ++C  C           
Sbjct: 63  WMCLQCGSVRC-----GRYESGHALKHSAKQNHNICINTVNLSVYCYKCDEFVVNDTPEN 117

Query: 127 -----RDQVYDRDFDAAVVLAHTTSIIQSSKP--ENLRKRRRIDYRPWSP---------- 169
                R ++ D D D     + T   I SSK   E            W            
Sbjct: 118 TLEEIRQELKDGDGDTVSETSSTMEEISSSKSGQETASSTSSSSDSGWEEPSTVSSVSSS 177

Query: 170 ---------------DLRERSLMV----NNASPIDSMSSSNGDLPRGLR---GLNNLGNT 207
                           LR R   +    NN +             + +R   GL NLGNT
Sbjct: 178 TTTSNSSSVSSSSVRKLRPRKRTISSDSNNENGTAGAGGGGTAKRKSMRRVVGLRNLGNT 237

Query: 208 CFMNSVLQALFHTPPLRNYF------LSDRHNRYYCQSKNGVRLCLACDLDTMF------ 255
           CFMNSVLQ+L +      YF       + +H     QS++     +  +LD +F      
Sbjct: 238 CFMNSVLQSLSNIQEFSGYFNTMPSLETGKHKHKAYQSRS-----MKENLDDVFVVEELR 292

Query: 256 ------SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH------- 302
                 S    G +   SP       W+       + Q DAHEF   MLD +H       
Sbjct: 293 KVLLNLSQGGDGSKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTELQQVS 352

Query: 303 ----------EKVEKDQHKPRS-------QGNGDCCIAHRVFSGILRSDVMCMACGFTST 345
                     +K  + +  P +       Q  G   I   VF GIL+S+V C+ CG  S 
Sbjct: 353 FPVEISSPSAQKASETKSNPYNIPALSHLQSKGRNSIVTNVFGGILQSEVRCLICGMESK 412

Query: 346 TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPE 405
             DP +D SLD+ P +  +     +        E D   +   C IS    CL  FT  E
Sbjct: 413 KHDPFLDLSLDI-PEKFYNKDPPESG-------EKDKEGNPPVCNIS---DCLASFTEVE 461

Query: 406 RLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL- 464
            L   + ++C  C+ +Q+S K+  IR+LP V C HIKRF  ++  +   K+D  + FP+ 
Sbjct: 462 ELTETELYYCSSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYRT--KIDLRISFPIN 519

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDA-GHYVTY 523
           +LDM+              +F   +G E+   N   + ++L AV+ H G   + GHY +Y
Sbjct: 520 ALDMS--------------QFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYTSY 565

Query: 524 LRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
              +  W   +D  + EV+ + V   + Y++FY+++
Sbjct: 566 AINNGVWMHFNDHSVKEVSSSAVAECKPYILFYIKR 601


>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 715

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 167/371 (45%), Gaps = 86/371 (23%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFL------SDRHNRYYCQSKNGVRLCLACDLDT 253
           GL NLGNTCF+NS++Q   HT PL    L      +D HN +          C+ C    
Sbjct: 155 GLANLGNTCFLNSIMQCFTHTVPLVEGLLLSCHSPNDGHNGF----------CVICAFRY 204

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH---EKVEKDQH 310
                        SP  F+ +  + +S+   ++Q+DAHEF    LD +       E+D  
Sbjct: 205 QMKQSLESTGRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKLETCFSNFEEDN- 263

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
                      IA +VF G L S + C  C  +S T +  +D SL++E            
Sbjct: 264 -----------IAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIE------------ 300

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
                               + ++   L+ FT  E +  D K  C+ C       KQ+ +
Sbjct: 301 -------------------NVDSISSALESFTMVENI--DAKLKCEGCNEEVSVEKQLML 339

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
            + P ++ FH+KRF+      +  K+D+++ FPL LD+ PY   +IL             
Sbjct: 340 DQTPSIAAFHLKRFKTVGNNAV-EKIDKHINFPLELDLQPY---TIL------------- 382

Query: 491 DESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRA 548
              N  +  S +++L+AVV H G   D+GHY  ++R + + W+K DD+ +T+V+E TV +
Sbjct: 383 ---NESDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVTKVSEGTVLS 439

Query: 549 AQGYMMFYVQK 559
            + Y++FY ++
Sbjct: 440 QEAYILFYARQ 450


>gi|410961241|ref|XP_003987192.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Felis
            catus]
          Length = 1087

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 727  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 786

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 787  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 843

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 844  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 903

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 904  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 934

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 935  DCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 992

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 993  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1031

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1032 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1076


>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
          Length = 487

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 183/404 (45%), Gaps = 82/404 (20%)

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRYY 236
           AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR  
Sbjct: 128 ASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN 187

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
                G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  + 
Sbjct: 188 LLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLF 244

Query: 297 MLDGIHEKVEK-DQHKPRSQGNGDCC-------------------IAHRVFSGILRSDVM 336
           ++DG+HE + K D  K   + N D                     I   +F G  +S V 
Sbjct: 245 LMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQ 304

Query: 337 CMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
           C+ C   S TF+  +  SL L                           S+  C   TL  
Sbjct: 305 CLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQD 335

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K+
Sbjct: 336 CLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQKL 393

Query: 457 DRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL 515
              + FPL +LD++ Y+                 G ++N       ++ LF+V  H G L
Sbjct: 394 QTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGGL 432

Query: 516 DAGHYVTYLRLS--NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           D GHY  Y + +   +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 433 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 476


>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
          Length = 607

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 177/397 (44%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S N   
Sbjct: 258 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSN-AH 313

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 314 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 373

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 374 EVNRVTARPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 432

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +                           + +     TLM C+  FT
Sbjct: 433 CSTVFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFT 465

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  ++K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 466 KEDVLDGEEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNF 523

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 524 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 561

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R   + +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 562 AYCRSPATGEWHTFNDSSVTAMSSSQVRTSDAYLLFY 598


>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
          Length = 606

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 178/397 (44%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R      + V 
Sbjct: 257 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSS-VH 312

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 373 EVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 431

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +                           + +     TLM C+  FT
Sbjct: 432 CSTVFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFT 464

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 465 KEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNF 522

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 523 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 560

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 561 AYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597


>gi|363739509|ref|XP_414742.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gallus gallus]
          Length = 1323

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 169/364 (46%), Gaps = 67/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NS LQ L +TPPL NY LS  H     QS N    C+ C ++T  + + 
Sbjct: 107 GLFNLGNTCFINSALQCLTYTPPLANYMLSLEH----TQSCNYQGFCMMCTMETHINRVL 162

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH--KPRSQGN 317
           C       PA  ++   R   +     Q+DAHEF    +D + +      H      + +
Sbjct: 163 CCAHDAIKPAFVVHELKRIGKHFRFGAQEDAHEFLRFTVDAMQQAC---LHGCTILDRSS 219

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
               I H++F G LRS V C+ C   S T++  +D  LD++                   
Sbjct: 220 QATTIIHQIFGGFLRSRVKCLNCKAVSDTYEAFLDIPLDIK------------------- 260

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                        +S++   L++F +PE+L  +  + C +C+    + K+ +I +   V 
Sbjct: 261 ------------TVSSVTKALEQFVKPEQLDGENCYKCSKCKKMVPASKRFTIHRSSNVL 308

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF + +  K++++V    ++P  LD+  Y+S SI                     
Sbjct: 309 TISLKRFANFTGGKINKEV----KYPEYLDLRAYMSQSI--------------------G 344

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMF 555
           EP   + L+AV+ H+G    AGHY  +++ ++  WY+ +DA + + N  TV   Q Y++F
Sbjct: 345 EPLI-YALYAVLVHSGVNSHAGHYFCFIKAADGLWYQMNDASVVQSNIKTVLGQQAYLLF 403

Query: 556 YVQK 559
           Y+++
Sbjct: 404 YIRR 407


>gi|57108191|ref|XP_535474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Canis
            lupus familiaris]
          Length = 1116

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 756  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 815

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 816  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 872

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 873  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 932

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 933  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 963

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 964  DCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1021

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1022 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1060

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1061 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1105


>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
           [Sus scrofa]
          Length = 606

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 189/419 (45%), Gaps = 82/419 (19%)

Query: 164 YRPWSPDLRERSLMVNNASP-IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPP 222
           Y PW     +  +   ++SP  D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  
Sbjct: 235 YTPWEKSKGQTPVSSRSSSPGRDTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRE 291

Query: 223 LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASN 281
           LR+Y L   + R    S +     L  +   +   I+        SP++F     R+A  
Sbjct: 292 LRDYCLQRLYMRDLSHSSS-AHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPR 350

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG---------------------DC 320
              Y QQDA EF   +LDG+H +V +   +P+S   G                     D 
Sbjct: 351 FVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSSPEGLDHLPDDEKGRQMWRKYLEREDS 410

Query: 321 CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEA 380
            I   +F G L+S + C  CG+ ST FDP  D SL +                       
Sbjct: 411 RIGD-LFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPI----------------------- 446

Query: 381 DGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFH 440
               + +     TLM C+  FT+ + L  D+K  C +C+ R+  +K+ S+++ P +   H
Sbjct: 447 ----AKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLH 502

Query: 441 IKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           +KRF  S +R  + K+  ++ FPL  LD+  + S +I                       
Sbjct: 503 LKRFSESRIR--TSKLTTFVNFPLRDLDLREFASENINH--------------------- 539

Query: 500 SSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            + + L+AV  H+G    GHY  Y R  ++ +W+  +D+ ++ ++ + VR +  Y++FY
Sbjct: 540 -AVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFY 597


>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
 gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
 gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
 gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
            Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
            isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
            thioesterase 8; AltName:
            Full=Ubiquitin-specific-processing protease 8
 gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
 gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
 gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
 gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
 gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
          Length = 1118

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|34784440|gb|AAH57470.1| Usp36 protein [Danio rerio]
          Length = 758

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 159/361 (44%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R   QS      C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSG----FCMICVMQNHIIQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ ++ +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDP------- 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 -VMYGLYAVLVHPGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|403274278|ref|XP_003928908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Saimiri
            boliviensis boliviensis]
          Length = 1012

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 652  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 711

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 712  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 768

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 769  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 828

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 829  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 859

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 860  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 917

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 918  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 956

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 957  LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1001


>gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
            [Callithrix jacchus]
          Length = 1118

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
 gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
          Length = 467

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 179/407 (43%), Gaps = 74/407 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 16  PSAPELHQDEAQVVEELAANGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 75

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L S +       
Sbjct: 76  DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHTHSGDVM--KPSQILTSAFH------ 126

Query: 284 SYEQQDAHEFFISMLDGIHEKVEK--DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACG 341
             +Q+DAHEF +  L+ +HE   +   Q +P S+   D    H +F G  RS + C  C 
Sbjct: 127 KRKQEDAHEFLMFTLETMHESCLQVHRQSEPTSE---DSSPIHDIFGGWWRSQIKCHHCQ 183

Query: 342 FTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRF 401
            TS ++DP +D  LD+                                 + ++   L   
Sbjct: 184 GTSYSYDPFLDIPLDIS-------------------------------SVQSVKQALQDT 212

Query: 402 TRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQ 461
            + E L  +  ++C +C+ ++ + K + +   P V    +KRF  S    M +K+DR + 
Sbjct: 213 EKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRFSGS----MGKKLDRKVS 268

Query: 462 FPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHY 520
           +P  LD+ PYLS             P  G            + L+AV+ H G    +GHY
Sbjct: 269 YPEFLDLKPYLSQ------------PTGG---------PLPYALYAVLVHEGATCHSGHY 307

Query: 521 VTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
              ++  + KWYK DD  +T  +  +V     Y++FYVQ+    K S
Sbjct: 308 FCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQNDLKKGS 354


>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
            melanoleuca]
 gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
          Length = 1116

 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 756  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 815

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 816  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 872

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 873  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 932

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 933  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 963

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 964  DCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1021

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1022 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1060

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1061 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1105


>gi|426379059|ref|XP_004056223.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Gorilla gorilla
            gorilla]
          Length = 1118

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
          Length = 1120

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 760  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 819

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 820  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 876

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 877  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 936

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 937  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 967

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 968  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1025

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1026 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1064

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1065 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1109


>gi|345794939|ref|XP_003433957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Canis lupus
           familiaris]
          Length = 1010

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
           +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 650 SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 709

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                 G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 710 NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 766

Query: 296 SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
            ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 767 FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 826

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 827 QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 857

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 858 DCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 915

Query: 456 VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
           +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 916 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 954

Query: 515 LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 955 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 999


>gi|380817804|gb|AFE80776.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA--LFQGQFKS 932

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 933  TVQCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---T 963

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 964  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1021

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+                 G ++N       ++ LF+V  H 
Sbjct: 1022 QKLQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHY 1060

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1061 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan
            troglodytes]
 gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan
            troglodytes]
 gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan
            troglodytes]
 gi|410355753|gb|JAA44480.1| ubiquitin specific peptidase 8 [Pan troglodytes]
 gi|410355755|gb|JAA44481.1| ubiquitin specific peptidase 8 [Pan troglodytes]
 gi|410355757|gb|JAA44482.1| ubiquitin specific peptidase 8 [Pan troglodytes]
 gi|410355759|gb|JAA44483.1| ubiquitin specific peptidase 8 [Pan troglodytes]
          Length = 1118

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
          Length = 899

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
           +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 539 SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 598

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                 G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 599 NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 655

Query: 296 SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
            ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 656 FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 715

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 716 QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 746

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 747 DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 804

Query: 456 VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
           +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 805 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 843

Query: 515 LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 844 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 888


>gi|388453897|ref|NP_001252548.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
 gi|387273381|gb|AFJ70185.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA--LFQGQFKS 932

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 933  TVQCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---T 963

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 964  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1021

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+                 G ++N       ++ LF+V  H 
Sbjct: 1022 QKLQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHY 1060

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1061 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
          Length = 565

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
           +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 205 SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 264

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                 G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 265 NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITVGKINDQFAGYSQQDSQELLL 321

Query: 296 SMLDGIHEKVEK-DQHKPRSQGNGDCC-------------------IAHRVFSGILRSDV 335
            ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 322 FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 381

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 382 QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 412

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 413 DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 470

Query: 456 VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
           +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 471 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 509

Query: 515 LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 510 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 554


>gi|355692711|gb|EHH27314.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA--LFQGQFKS 932

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 933  TVQCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---T 963

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 964  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1021

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+                 G ++N       ++ LF+V  H 
Sbjct: 1022 QKLQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHY 1060

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1061 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
            abelii]
 gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
            abelii]
 gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
          Length = 1118

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
          Length = 605

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 166/386 (43%), Gaps = 78/386 (20%)

Query: 179 NNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYY-C 237
           N  +P  S +     + R  +GL NLGNTCF+N+ LQ+L H PP     L    +    C
Sbjct: 75  NWITPCSSTTLEWKRIFRSGKGLRNLGNTCFLNAALQSLLHCPPFATALLEKIFSAASNC 134

Query: 238 QSKNGVRLCLACDLDTMFSAIFCGDR--MPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
            S +G   C  C ++     +F  D     YSP   + +    + N     Q DAHE+  
Sbjct: 135 PSHSG--YCSICAVEKTAQNVFSSDTSFQSYSPVDLVRNLKVLSRNFTPGRQADAHEYIR 192

Query: 296 SMLDGIHEKVEKDQHKPRSQGNGDCC---------IAHRVFSGILRSDVMCMACGFTSTT 346
            +LD ++  +      PR    G  C         + H +F G   S V C  CG +S T
Sbjct: 193 FLLDDMNRIL---LGIPR----GKLCHDRQQEMHTLVHEIFGGCYESKVSCQNCGSSSDT 245

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
            +P +D SLDLE                               G+STL   L  FT PER
Sbjct: 246 VEPFLDVSLDLE-------------------------------GVSTLAKALKGFTTPER 274

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSL 466
           L    ++FC QC+ R ++ K    R++P V  FH+KRF      ++S+K ++++ +  + 
Sbjct: 275 LFGPNRYFCSQCKQRTDASKVFQFRRIPNVFIFHLKRF------RLSKKENKFVSYDETF 328

Query: 467 DMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLR 525
           D +P              F P  G   N++ +P   + L AV+ H G  +  GHY  Y+R
Sbjct: 329 DFSP--------------FIPLKG---NSIRKPVY-YRLCAVIVHEGFSIHGGHYYAYVR 370

Query: 526 LSNK-WYKCDDAWITEVNENTVRAAQ 550
            SN  WY  DD   + V +  V   +
Sbjct: 371 NSNGIWYLKDDECTSRVVQQKVNNTE 396


>gi|410961243|ref|XP_003987193.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Felis
           catus]
          Length = 1010

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
           +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 650 SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 709

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                 G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 710 NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 766

Query: 296 SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
            ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 767 FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 826

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 827 QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 857

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 858 DCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 915

Query: 456 VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
           +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 916 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 954

Query: 515 LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 955 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 999


>gi|351715023|gb|EHB17942.1| Ubiquitin carboxyl-terminal hydrolase 8 [Heterocephalus glaber]
          Length = 1106

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 186/406 (45%), Gaps = 86/406 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF     NR Y Q 
Sbjct: 746  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF-----NRNYYQD 800

Query: 240  KN------GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEF 293
                    G +  +A +   +  A++ G     SP  F  +  +     A Y QQD+ E 
Sbjct: 801  DINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQEL 860

Query: 294  FISMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRS 333
             + ++DG+HE + K D  K   + N D                     I   +F G  +S
Sbjct: 861  LLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKS 920

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 921  TVQCLTCHRKSRTFEAFMYLSLPL--------------------------ASTSKC---T 951

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 952  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1009

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         ++L     ++ LF+V  H 
Sbjct: 1010 QKLQTSVDFPLENLDLSQYV--------IGPK---------HSLK----KYSLFSVSNHY 1048

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY
Sbjct: 1049 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1094


>gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens]
          Length = 1118

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|403274276|ref|XP_003928907.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Saimiri
            boliviensis boliviensis]
          Length = 1118

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|194383128|dbj|BAG59120.1| unnamed protein product [Homo sapiens]
          Length = 1012

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 652  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 711

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 712  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 768

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 769  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 828

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 829  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 859

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 860  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 917

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 918  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 956

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 957  LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1001


>gi|432869264|ref|XP_004071701.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Oryzias
           latipes]
          Length = 1055

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 165/374 (44%), Gaps = 63/374 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R   QS      C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQSG----FCMICVMQNHIIQTF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D ++++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ ++ +   V   
Sbjct: 277 ----------QTANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGD-------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYIKASNGQWYQMNDSMVQSSNIKVVLNQQAYVLFYL 421

Query: 558 QKMLYYKASEKQGT 571
           +     K ++ Q T
Sbjct: 422 RIPETKKTADGQTT 435


>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
           [Monodelphis domestica]
          Length = 600

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 172/389 (44%), Gaps = 84/389 (21%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG---VRLCLACDLD 252
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L     R Y +  N        L  +  
Sbjct: 259 QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCL----QRLYLRDLNSSSHAHTALMEEFA 314

Query: 253 TMFSAIFCGDRMPY-SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
            +   I+        SP++F     R A     Y QQDA EF   +LDG+H +V +   +
Sbjct: 315 KLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 374

Query: 312 PRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           P+S                         D  I   +F G L+S + C  CG+ ST FDP 
Sbjct: 375 PKSNPENLDHLPDEEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTECGYCSTVFDPF 433

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
            D SL +                           + +     TLM C+  FT+ + L  D
Sbjct: 434 WDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKEDVLDGD 466

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMA 469
           +K  C +C+ R+  +K+ SI+K P +   H+KRF  S +R  + K+  ++ FPL  LD+ 
Sbjct: 467 EKPTCCRCRARKRCIKKFSIQKFPKILVLHLKRFSESRIR--TSKLTTFVNFPLRDLDLR 524

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LS 527
            + S                       N   + + L+AV  H+G    GHY  Y R  ++
Sbjct: 525 EFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPVT 562

Query: 528 NKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            +W+  +D+ +T ++ + VR++  Y++FY
Sbjct: 563 GEWHTFNDSSVTPMSSSQVRSSDAYLLFY 591


>gi|355778036|gb|EHH63072.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca fascicularis]
 gi|383422691|gb|AFH34559.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA--LFQGQFKS 932

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 933  TVQCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---T 963

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 964  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1021

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+                 G ++N       ++ LF+V  H 
Sbjct: 1022 QKLQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHY 1060

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1061 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
            [Callithrix jacchus]
          Length = 1012

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 652  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 711

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 712  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 768

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 769  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 828

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 829  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 859

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 860  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 917

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 918  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 956

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 957  LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1001


>gi|332843788|ref|XP_001168540.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pan
            troglodytes]
          Length = 1012

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 652  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 711

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 712  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 768

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 769  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 828

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 829  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 859

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 860  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 917

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 918  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 956

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 957  LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1001


>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus rotundus]
          Length = 1116

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 756  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 815

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 816  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKTTIGKINDQFAGYSQQDSQELLL 872

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 873  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQFKSTV 932

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 933  QCLTCHKRSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 963

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 964  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1021

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1022 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1060

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1061 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1105


>gi|126277553|ref|XP_001370028.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Monodelphis
            domestica]
          Length = 1102

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 742  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRS 801

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     + Y QQD+ E  +
Sbjct: 802  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLL 858

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 859  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 918

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 919  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 949

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++S+K++ I KLP V   H+KRF +    +  +K
Sbjct: 950  DCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1007

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL SLD++ Y+                 G ++N        + LF+V  H G 
Sbjct: 1008 LQTSVDFPLESLDLSQYVI----------------GPKNNL-----KRYNLFSVSNHYGG 1046

Query: 515  LDAGHYVTYLRLS--NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y + +   +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1047 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1091


>gi|403171157|ref|XP_003889462.1| hypothetical protein PGTG_21821 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375169055|gb|EHS63805.1| hypothetical protein PGTG_21821 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 562

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 133/549 (24%), Positives = 219/549 (39%), Gaps = 133/549 (24%)

Query: 66  CGVCGDSSCPRLYACMACAAVSC-----HVPPHSSHVAIHATKTSSACSHEIAVDVDRAE 120
           C  C  ++ PRL  C+ CAAV C            +++ H+TK+S      + +D+   E
Sbjct: 86  CLRCRTATSPRL-VCLGCAAVLCFDNLDRPALKPCYLSGHSTKSSKCL---LGLDLSCRE 141

Query: 121 LFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNN 180
           L C  C   V   D +  ++       ++               R ++P    R+     
Sbjct: 142 LICMVCGTIVQPDDHELKILSRRLFPQVK---------------RAYAPGCVGRT----- 181

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK 240
                   +S    PRG R   NLGN+C+MN +LQ L   P L+ Y L+D HNR   +S 
Sbjct: 182 --------TSTIMAPRGFR---NLGNSCYMNVILQILLRIPELQGYLLTDHHNRLKHRSA 230

Query: 241 NGVRLCLACDLDTMFS-------------AIFCGDRMPYSPAKFLYSWWRHASN---LAS 284
           + V  C AC+L  +               +       P SP  FLY+ W ++ +    A 
Sbjct: 231 DEV-WCCACELIDILQLHHLQLSQLQQNRSKALAPAEPISPVGFLYALWLNSGDGEEFAG 289

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDC------------------------ 320
           Y + DAHE  ++ L+ +H   +    +  +   G                          
Sbjct: 290 YRESDAHECLLACLNQLHTATQVPTPQAGAHAVGPASGSTTTPTTIAAAATTTIASGPPS 349

Query: 321 ----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL-EPNQGSSMKTSS 369
                     C    +F   L S V+C +C  TS   DP +D SL++   N   +++   
Sbjct: 350 SAGEPTTRCQCPIDLLFRCELTSQVVCGSCRKTSYKVDPILDLSLEIGHLNHLETLR--- 406

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ-ESLKQM 428
                                   L  CL  FT+ ERL  ++ + C QC V   E+ K +
Sbjct: 407 ------------------------LEDCLHSFTKAERL-KEKCYTCHQCSVASPETTKSL 441

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           +I +LP + C  +KRFEH      + K+DR+++FPL LDM P+ S ++  +R        
Sbjct: 442 TISRLPHILCIQLKRFEHH--LSSASKLDRFVKFPLVLDMKPFASPNLAENRPDLLSSDV 499

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRA 548
           DG            ++L  +V H G + +GHY   +    +++  +D  ++ +    V  
Sbjct: 500 DG----------YYYKLTGIVRHQGNVSSGHYQAIIYQDEQYFCFNDESVSILRLEEVLK 549

Query: 549 AQGYMMFYV 557
            + Y++ Y 
Sbjct: 550 VEAYILVYT 558


>gi|348668895|gb|EGZ08718.1| hypothetical protein PHYSODRAFT_564649 [Phytophthora sojae]
          Length = 583

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 181/399 (45%), Gaps = 56/399 (14%)

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
           PRGL GL NLGNTCFMNS LQ + + P +  YF      R   +S +  +  LA     +
Sbjct: 200 PRGLVGLQNLGNTCFMNSCLQCVSNLPAIVRYFHPGLFAREINES-SPTKGALANAFGDL 258

Query: 255 FSAIFCGDRMPYS-PAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
             A++ GD+   + P +      + AS    Y+QQDA EF   +LDG+HE + + + KP 
Sbjct: 259 IKALWTGDKFTATRPVELKRVIGKVASRFTGYDQQDAQEFLRFLLDGLHEDLNRVKKKPA 318

Query: 314 SQGNGD---------------------CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVD 352
                D                           +F G LRS++ C  C   S  FD   D
Sbjct: 319 YYEIKDRPDAKDRDVSDEYWKFYLERNASALSELFCGQLRSEIRCETCNHRSLCFDVFWD 378

Query: 353 FSLDLEPNQGSSMKTSSTKSNHS---------CNCEADGMNSSQNCGISTLMGCLDRFTR 403
            SL +      S  +S  + + S          + ++   +SS   G  ++  CL  +T 
Sbjct: 379 LSLPVPKKSSKSSASSHLRISSSFFSGGRTTSASTDSSSSSSSPGAGGMSIHDCLKAYTE 438

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
            E L  D  ++C +C+  + + K++S+ +LP V   H+KRF  S+  +   KV   + FP
Sbjct: 439 QEFLSDDAAYYCSKCKTHRSAAKKISVYRLPNVLVLHLKRFSFSTFSR--DKVSTSISFP 496

Query: 464 L-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVT 522
             SLD+A Y SS  +           DG         S+ ++L  +V H G L+ GHY  
Sbjct: 497 AQSLDLAEYCSSDAV----------VDG---------STLYDLTGIVHHMGSLNGGHYTA 537

Query: 523 YLRLSN--KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
               ++  +W+  +D+ +T + +  + ++  YM+FY ++
Sbjct: 538 ECLNADMQEWFDFNDSSVTAIKKPELYSSSAYMLFYQRR 576


>gi|340373937|ref|XP_003385496.1| PREDICTED: hypothetical protein LOC100638383 [Amphimedon
            queenslandica]
          Length = 1278

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 198/454 (43%), Gaps = 94/454 (20%)

Query: 124  CACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASP 183
             + R QV   D +     +  T   + + P+  R  +     P SPD+  + ++  N  P
Sbjct: 880  VSGRGQVVPGDHNQVAKSSGPTG--RPALPQIDRTTKPKQAPPMSPDVYRQKII--NLQP 935

Query: 184  IDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH----NRYYCQS 239
            +       G +  GL GL NLGNTCFM+SV+Q L  TPPL  YF + ++    NR     
Sbjct: 936  V------QGGIGPGLTGLRNLGNTCFMSSVIQCLCATPPLVKYFFNGQYRADLNRSNPLG 989

Query: 240  KNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
              G+   LA +   + +AI+ G     +P +F  +  + A   A  EQ D+ EF + +LD
Sbjct: 990  SGGI---LAEEFYILVAAIWLGKFRYIAPLEFKNTVSQVAPYFAGNEQHDSQEFLVYLLD 1046

Query: 300  GIHEKVEKDQHK-----PRSQGNGDCCI------AHR---------VFSGILRSDVMCMA 339
            G+HE + K   K     P + G  D         AH+         +F G+L+S + C++
Sbjct: 1047 GLHEDLNKVLVKSYVELPDTDGVPDPVAVEQAWQAHKKRNNSIIIDLFHGLLKSTITCLS 1106

Query: 340  CGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLD 399
            CG     F+P V  S+ +             +   SC                +   C  
Sbjct: 1107 CGKKKVMFEPFVSLSVPI------------PRGRTSC----------------SYHDCFK 1138

Query: 400  RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFE-HSSVRKMSRKVDR 458
             FT  ER+    K+FC QC+  ++S K + I +LP +   H KRF+   +VR+   K+  
Sbjct: 1139 LFTAKERMTGTNKWFCPQCKASRDSEKTLFIWRLPPILLLHFKRFQDKGTVRE---KLST 1195

Query: 459  YLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDA 517
             + FP+ SLD+  Y+         G R              P++++ L+A+  HTG L +
Sbjct: 1196 SISFPIESLDLNSYV--------VGPR--------------PTNQYSLYAISNHTGSLQS 1233

Query: 518  GHYVTYLR--LSNKWYKCDDAWITEVNENTVRAA 549
            GHY    R   S K++  DD  + + +   +  +
Sbjct: 1234 GHYTATCRHPRSQKFHFFDDQDVRQTSSQNINVS 1267


>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
          Length = 373

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 162/389 (41%), Gaps = 79/389 (20%)

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           L +   GL NLGNTCFMNS++Q L HT PL  Y L D +        +  R  L     T
Sbjct: 29  LDKAPLGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFAT 88

Query: 254 MFSAIFCGDRMPY--SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
           +  +I+      Y  SP  F     + A     Y QQD+ EF   +L G+HE + +   +
Sbjct: 89  LMKSIWRSSNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITSR 148

Query: 312 PRSQGN------GDCCIAHRVFSGILRSD---------------VMCMACGFTSTTFDPC 350
           PR           D   A   +   LR D               + C  CG  S TFDP 
Sbjct: 149 PRHVTTEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVXXXXXTLKCSVCGHKSVTFDPF 208

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
            D SL + P    S+                           T+  CL  FT+ E L  D
Sbjct: 209 WDLSLPI-PKSSDSV---------------------------TIQQCLSLFTKEEVLDGD 240

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMA 469
           +K  C  C+ RQ   K  +I + P +   H+KRF  S   +   K++  ++FPL+ LD+ 
Sbjct: 241 EKPTCSNCETRQRCTKSFTIHRCPKILVLHLKRF--SPGERFRAKLNTRVEFPLTNLDLC 298

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LS 527
           PY+S                       N     + L+AV  H+G   +GHY        S
Sbjct: 299 PYMS-----------------------NSHYVMYNLYAVSNHSGSTYSGHYTATCLHPKS 335

Query: 528 NKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            +W++C+D  +TEV+ + V +++ Y++FY
Sbjct: 336 GEWHECNDTKVTEVSSSRVASSEAYVLFY 364


>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
           harrisii]
          Length = 599

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 172/389 (44%), Gaps = 84/389 (21%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG---VRLCLACDLD 252
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L     R Y +  N        L  +  
Sbjct: 258 QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCL----QRLYLRDLNSSSHAHTALMEEFA 313

Query: 253 TMFSAIFCGDRMPY-SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
            +   I+        SP++F     R A     Y QQDA EF   +LDG+H +V +   +
Sbjct: 314 KLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 373

Query: 312 PRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           P+S                         D  I   +F G L+S + C  CG+ ST FDP 
Sbjct: 374 PKSNPENLDHLPDEEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTECGYCSTVFDPF 432

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
            D SL +                           + +     TLM C+  FT+ + L  D
Sbjct: 433 WDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKEDVLDGD 465

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMA 469
           +K  C +C+ R+  +K+ SI+K P +   H+KRF  S +R  + K+  ++ FPL  LD+ 
Sbjct: 466 EKPTCCRCRARKRCIKKFSIQKFPKILVLHLKRFSESRIR--TSKLTTFVNFPLRDLDLR 523

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LS 527
            + S                       N   + + L+AV  H+G    GHY  Y R  ++
Sbjct: 524 EFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPVT 561

Query: 528 NKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            +W+  +D+ +T ++ + VR++  Y++FY
Sbjct: 562 GEWHTFNDSSVTPMSSSQVRSSDAYLLFY 590


>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
           harrisii]
          Length = 1358

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+N+ LQ L +TPPL NY LS  H++  C  +     C+ C +    +   
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSK-ICHEQG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE-----KVEKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   S
Sbjct: 168 NNPGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRH---S 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V CM C   S TFDP +D  L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + S  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFSGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN +WY+ +D+ ++  +  +V   
Sbjct: 346 ---QPNGEPIIYVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|344297764|ref|XP_003420566.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Loxodonta africana]
          Length = 367

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 166/374 (44%), Gaps = 69/374 (18%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     +S   V    A     + 
Sbjct: 41  QGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKSCGEVATAFA----YLM 96

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + ++ GD    SP  F  +            QQDA EF I +L+ +HE ++K   +   +
Sbjct: 97  TDMWLGDSGCVSPEIFRSALGNLYPAFMKKTQQDAQEFLIYVLNDLHEALKKYHRRSYEK 156

Query: 316 GNG-DCC---------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
           G+   CC         I  R+F G L  DV+C+ C   S               N+  ++
Sbjct: 157 GSTRRCCRKVIATESSIITRLFEGQLNYDVICLKCENCSYK-------------NEVFTV 203

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
            +    S + C                +L  CL  F + + L  + +  C  C+ +QE+ 
Sbjct: 204 LSLPIPSEYEC----------------SLQDCLQCFFQQDTLTWNNQIHCSFCETKQETA 247

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNR 484
            + SI K P +  FH+KRF+      M RK+  ++ +PL+ LD+ PY+   I R      
Sbjct: 248 VRASISKAPKIIIFHLKRFDVQGT--MKRKLRTHIHYPLTNLDLTPYI-CPIFRKH---- 300

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVN 542
                            ++ L AVV H G LD GHY  + R  ++  WY  DD  ++E+ 
Sbjct: 301 ----------------PKYSLCAVVNHFGDLDGGHYTAFCRNSVTQAWYSFDDTRVSEIP 344

Query: 543 ENTVRAAQGYMMFY 556
             +V+ A  Y++FY
Sbjct: 345 NTSVQTATAYLLFY 358


>gi|238883868|gb|EEQ47506.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 598

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 173/402 (43%), Gaps = 94/402 (23%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR---------HNRYYCQSK-NGVRL 245
           +GL+G  NLG TCFM+S+LQ L H P ++  F ++          HN++  Q   +    
Sbjct: 250 KGLKGFVNLGATCFMSSILQTLIHNPLIKYQFFNNDLHYFNCEKFHNQFINQGNIDENNA 309

Query: 246 CLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH-- 302
           C+ C +D +F + +       +     L + W    +LA +E+QDAHEF+  +L+  H  
Sbjct: 310 CITCSIDNIFQSFYTSTTNEGFGMTNLLTTAWYKQKSLAGFEEQDAHEFWQFLLNEFHMD 369

Query: 303 ----------------------EKVEKDQHKPR--SQGNGDCCIAHRVFSGILRSDVMCM 338
                                 +  EK+ H     S  N   CI H  FS  L+S + C 
Sbjct: 370 YQRIINNLNSNSNLNSNSNSNQDNNEKNTHSSNDDSVVNSCGCIMHSTFSFELQSCIKCD 429

Query: 339 ACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCL 398
           +C   + T DP +D SL++                                  + L   L
Sbjct: 430 SCDSITETVDPMIDLSLEV--------------------------------NFTNLYQSL 457

Query: 399 DRFTRPERLG--SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKM-SRK 455
             FTR E+L   + +     +      ++K++ ++ LP +    +KRF H  +    + K
Sbjct: 458 QSFTRDEKLDDYNCKNCNNNKSTTTTSAIKKLRLKTLPQILSIQLKRFRHDILGSFQATK 517

Query: 456 VDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL 515
           +  ++ FPL L++  Y                      + +N+    ++LFAVV H G +
Sbjct: 518 IQSHINFPLFLNVTEY----------------------SVINDTDYIYQLFAVVCHQGSI 555

Query: 516 DAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           + GHY  +++ +  WYK DD+ +T V+++ V  ++ Y+++Y+
Sbjct: 556 NTGHYTVFIKNNGNWYKFDDSVVTMVSQDVVINSEAYLLYYI 597


>gi|189517356|ref|XP_688241.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Danio rerio]
          Length = 1104

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R   QS      C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSG----FCMICVMQNHIIQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ ++ +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGD-------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|379030633|ref|NP_001243801.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8
           [Homo sapiens]
 gi|187653909|sp|P0C7I0.1|U17L8_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
           17-like protein 8
          Length = 530

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL NY LS  H++  CQ     + C+ C +    +   
Sbjct: 81  GLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQ-TCQRP---KCCMLCTMQAHITWAL 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                 +SP   +      A+     +Q+DAHEF +  +D + +K     HK     + D
Sbjct: 137 ------HSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  +   +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFCDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     G+Y +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 42 [Monodelphis domestica]
          Length = 1371

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+N+ LQ L +TPPL NY LS  H++  C  +     C+ C +    +   
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSK-ICHEQG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE-----KVEKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   S
Sbjct: 168 NNPGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRH---S 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V CM C   S TFDP +D  L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + S  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFSGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN +WY+ +D+ ++  +  +V   
Sbjct: 346 ---QPNGEPIIYVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|260801080|ref|XP_002595424.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
 gi|229280670|gb|EEN51436.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
          Length = 965

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 170/366 (46%), Gaps = 71/366 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+N+GNTCF+NSV+Q L +T PL N+ +S+     + QS      C+ C+L      +F
Sbjct: 137 GLDNMGNTCFLNSVIQCLSYTAPLVNHLMSE-----HQQSCRVSDWCMMCELGRHLHRVF 191

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE----KVEKDQHKPRS 314
                    P   +      A  +    Q+DAHEFF+S+++ +          + +K   
Sbjct: 192 NNSNAHSIRPMTIINRLKSIAKTMQFGRQEDAHEFFMSVVNAMQRACLMNCNINPNKNVD 251

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               +  I ++VFSG  RS V C  C   S TFDP +D  LD+   +GSS++        
Sbjct: 252 TSTANTTIVYQVFSGYCRSQVRCCRCSNLSNTFDPFLDLPLDI---RGSSVQQ------- 301

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                                 CL+R+ R E++  +  + C++C+ + +++K++SI + P
Sbjct: 302 ----------------------CLERYVRAEQMSDENAYSCEKCKRKCQAVKKLSIHRAP 339

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF +     M  KV + +Q+  ++++  Y+S                     
Sbjct: 340 NVLTISLKRFNN-----MGLKVTKEVQYSETMNLRAYMSQE------------------- 375

Query: 495 TLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGY 552
               P   ++L+AV+ H G     GHY  +++  N  W+  +D+ + +V  NTV + Q Y
Sbjct: 376 ---GPPVIYKLYAVLVHQGFSCHGGHYYCFIKAPNGVWHMMNDSLVRQVGLNTVLSQQAY 432

Query: 553 MMFYVQ 558
           ++FY++
Sbjct: 433 LLFYIR 438


>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
           intestinalis]
          Length = 543

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 181/405 (44%), Gaps = 82/405 (20%)

Query: 182 SPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN 241
           SP  S+   +G    G  GL N+GNTCFMNS+LQ L +T  LR Y + + +     + + 
Sbjct: 188 SPSRSLGKESG----GNVGLRNIGNTCFMNSILQCLSNTTILREYCMDETY-----KGEI 238

Query: 242 GVRLCLACDLDTMFSAIFCGDRMP----YSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
                +  DL   F  +      P    +SP  F     + +     YEQQD  EF   +
Sbjct: 239 NRNSPMKGDLMRAFVEVLVRLWKPNGISHSPNNFKSKIQKFSPRFMGYEQQDCQEFLRFL 298

Query: 298 LDGIHEKVEK----------------DQHKPRSQ----GNGDCCIAHRVFSGILRSDVMC 337
           L+G+HE + +                 Q K R+        D      +F G L S + C
Sbjct: 299 LEGLHEDINRVRIKSKEPLRELSHLSPQEKARATWSWYTTKDDSFIFDLFVGQLESSLEC 358

Query: 338 MACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGC 397
             C  TS T+DP  D SL +                      +  M S++   ++T+  C
Sbjct: 359 QECRHTSLTYDPFWDLSLPI----------------------SKKMYSNE---VTTITDC 393

Query: 398 LDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVD 457
           LD FTR E L  D+K  C++C+VR+   K++SI K P V   H+KRF   S  +  +K++
Sbjct: 394 LDNFTREETLDKDEKPICERCKVRRTMTKKLSIHKFPKVLVLHLKRFNEGS--RYRQKLN 451

Query: 458 RYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD 516
             ++FP+ SL++  + S    ++R GN   P               ++L+AV  H G   
Sbjct: 452 NLVKFPVTSLNLRNFAS----KTREGN--LP-------------PTYDLYAVSNHCGSCY 492

Query: 517 AGHYVTYL--RLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            GHY  Y     S+ W + +D+ +  +++  V   + Y++FYV+K
Sbjct: 493 GGHYTAYCYNSSSHAWLEYNDSSVNPISDGDVCTKEAYVLFYVRK 537


>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
          Length = 612

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 177/396 (44%), Gaps = 86/396 (21%)

Query: 190 SNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS---KNGVRLC 246
           +N    +GL GL NLGNTCFMNS+LQ L +T  L++Y L     R Y Q     +     
Sbjct: 265 TNSKSTQGLAGLRNLGNTCFMNSILQCLSNTRELKDYCL----QRLYMQDLSHTSSTHTA 320

Query: 247 LACDLDTMFSAIF--CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
           L  +   +   I+  C + +  SP++F     R+A     Y QQDA EF   +LDG+H +
Sbjct: 321 LMEEFAKLIQTIWTSCPNDV-VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE 379

Query: 305 VEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFT 343
           V +   +P+S                         D  I   +F G L+S + C  CG+ 
Sbjct: 380 VNRVTVRPKSNPENLNHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYC 438

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           ST FDP  D SL +                           + ++    TLM C+  FT+
Sbjct: 439 STVFDPFWDLSLPI---------------------------AKRSYPEVTLMDCMRLFTK 471

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
            + L  D+K  C  C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ FP
Sbjct: 472 EDVLDGDEKPTCCCCRARKRCIKKFSIQRFPTILVLHLKRFSESRIR--TSKLTTFVNFP 529

Query: 464 L-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVT 522
           L  LD+  + S                       N   + + L+AV  H+G    GHY  
Sbjct: 530 LRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTA 567

Query: 523 YLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           Y R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 568 YCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 603


>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
           garnettii]
          Length = 606

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 177/397 (44%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R      +   
Sbjct: 257 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSS-AH 312

Query: 245 LCLACDLDTMFSAIFCGDRMPY-SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 373 EVNRVAPRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 431

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +                           + +     TLM C+  FT
Sbjct: 432 CSTVFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFT 464

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 465 KEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNF 522

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 523 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 560

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 561 AYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597


>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
           Specific Inhibitor
          Length = 396

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 183/404 (45%), Gaps = 82/404 (20%)

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRYY 236
           AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR  
Sbjct: 45  ASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN 104

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
                G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  + 
Sbjct: 105 LLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLF 161

Query: 297 MLDGIHEKVEK-DQHKPRSQGNGDCC-------------------IAHRVFSGILRSDVM 336
           ++DG+HE + K D  K   + N D                     I   +F G  +S V 
Sbjct: 162 LMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQ 221

Query: 337 CMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
           C+ C   S TF+  +  SL L                           S+  C   TL  
Sbjct: 222 CLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQD 252

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K+
Sbjct: 253 CLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQKL 310

Query: 457 DRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL 515
              + FPL +LD++ Y+                 G ++N       ++ LF+V  H G L
Sbjct: 311 QTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGGL 349

Query: 516 DAGHYVTYLRLS--NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           D GHY  Y + +   +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 350 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 393


>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 316

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 160/370 (43%), Gaps = 66/370 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF+NSVLQ L HTP L N+ L   H +Y    K G       ++    +   
Sbjct: 3   GLANLGNTCFLNSVLQCLTHTPALANFALRGEHKKY----KTGGSFNALYEIGEHVARAL 58

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK---VEKDQHKPRSQG 316
                  +P   + +    +       Q+DAHE    +LD +H+K   V K +  P S  
Sbjct: 59  NSSGRTIAPTALVKNLRALSKTFRKGRQEDAHELARCLLDAMHKKCVEVVKPKISPNS-A 117

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             +     +VF G LRS V C  CG  S TFDP +D SL++   +               
Sbjct: 118 RAETSFVWKVFGGRLRSQVNCKTCGRNSETFDPFLDLSLEVGRAK--------------- 162

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES-----LKQMSIR 431
                           +++G    FT  E L  D K+ C+      +S      KQ ++ 
Sbjct: 163 ----------------SVLGAFKMFTHTEVLDGDNKYRCEGKSANSKSHLTKASKQFTVN 206

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
           + P V    +KRF +    +   K++ ++++PL LD+ PY S   L SR           
Sbjct: 207 QAPNVLALQLKRFAYVPFGR--GKLNHFVEYPLELDITPYTSDEGLTSR----------- 253

Query: 492 ESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAA 549
                    + ++L+ V+ H G   ++GHY  ++++ +  W   DD  IT V+E  V   
Sbjct: 254 -------GKAVYDLYGVLVHAGNSSNSGHYYCFVKVATGTWCLMDDDEITSVSEKVVLKQ 306

Query: 550 QGYMMFYVQK 559
           Q Y++FY ++
Sbjct: 307 QAYLLFYARR 316


>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
          Length = 468

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 179/407 (43%), Gaps = 74/407 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 17  PSAPELHQDEAQVVEELAANGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L S +       
Sbjct: 77  DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHTHSGDVM--KPSQNLTSAFH------ 127

Query: 284 SYEQQDAHEFFISMLDGIHEKVEK--DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACG 341
             +Q+DAHEF +  L+ +HE   +   Q +P S+   D    H +F G  RS + C  C 
Sbjct: 128 KRKQEDAHEFLMFTLETMHESCLQVHRQSEPTSE---DSSPIHDIFGGWWRSQIKCHHCQ 184

Query: 342 FTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRF 401
            TS ++DP +D  LD+                                 + ++   L   
Sbjct: 185 GTSYSYDPFLDIPLDIS-------------------------------SVQSVKQALQDT 213

Query: 402 TRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQ 461
            + E L  +  ++C +C+ ++ + K + +   P V    +KRF  S    M +K+DR + 
Sbjct: 214 EKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRFSGS----MGKKLDRKVS 269

Query: 462 FPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHY 520
           +P  LD+ PYLS             P  G            + L+AV+ H G    +GHY
Sbjct: 270 YPEFLDLKPYLSQ------------PTGG---------PLPYALYAVLVHEGATCHSGHY 308

Query: 521 VTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
              ++  + KWYK DD  +T  +  +V     Y++FYVQ+    K S
Sbjct: 309 FCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQNDLKKGS 355


>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
          Length = 545

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 166/366 (45%), Gaps = 75/366 (20%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAI 258
           GL N GN+C++N+ LQ L HTPPL +Y LS  +++  C S  G ++C +   +       
Sbjct: 52  GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC-SPEGCKMCAMEAHVTQSLLHS 110

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQ 315
             GD M   P++ L       S    ++Q+DAHEF +  L+ +HE   +V + Q +P S+
Sbjct: 111 HSGDVM--KPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQVHR-QSEPTSE 161

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D    H +F G+ RS + C+ C  TS T+D  +D  LD+   Q  +     T+    
Sbjct: 162 ---DSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTE---- 214

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                                      + E L  +  ++C +C+ +  + K + I   P 
Sbjct: 215 ---------------------------KSEELRGENAYYCGRCRQKMPASKTLHIHSAPK 247

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    +KRF  S    M  K+DR + +P  LD+ PYLS             P  G     
Sbjct: 248 VLLLVLKRFSAS----MGNKLDRKVSYPEFLDLKPYLSQ------------PTGG----- 286

Query: 496 LNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ H G    +GHY +Y++  + KWYK DD  +T  +  +V     Y+
Sbjct: 287 ----PLPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYV 342

Query: 554 MFYVQK 559
           +FYVQ+
Sbjct: 343 LFYVQQ 348


>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
           rotundus]
          Length = 602

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 171/386 (44%), Gaps = 78/386 (20%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S N     L  +   + 
Sbjct: 261 QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSN-AHTALMEEFAKLI 319

Query: 256 SAIFCGDRMPY-SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
             I+        SP++F     R+A     Y QQDA EF   +LDG+H  V +   +P+S
Sbjct: 320 QTIWTSSLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRVTVRPKS 379

Query: 315 QGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
                                    D  I   +F G L+S + C  CG+ ST FDP  D 
Sbjct: 380 NPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCSTVFDPFWDL 438

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           SL +                           + +     TLM C+  FT+ + L  D+K 
Sbjct: 439 SLPI---------------------------AKRGYPEVTLMDCMRLFTKEDVLDGDEKP 471

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYL 472
            C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ FPL  LD+  + 
Sbjct: 472 TCCRCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLRDLDLREF- 528

Query: 473 SSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKW 530
                               S T N   + + L+AV  H+G    GHY  Y R  ++ +W
Sbjct: 529 -------------------ASETTNH--AVYNLYAVSNHSGTTVGGHYTAYCRSPVTGEW 567

Query: 531 YKCDDAWITEVNENTVRAAQGYMMFY 556
           +  +D+ +T +  + VR +  Y++FY
Sbjct: 568 HTFNDSSVTSMFSSQVRTSDAYLLFY 593


>gi|109085555|ref|XP_001084204.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Macaca mulatta]
          Length = 529

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 170/372 (45%), Gaps = 73/372 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY-YCQSKNGVRLCLACDLDTMFS-A 257
           GL N+G+TC++N+ LQ L +TPPL NY LS  H++  +C      + C+ C ++   + A
Sbjct: 81  GLQNMGDTCYVNASLQCLTYTPPLANYMLSREHSQLCHCH-----KSCMLCTMEAHITWA 135

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
           + C   +   P++ L      A+     +Q+DAHEF + ++D + +K     HK     +
Sbjct: 136 LHCPGHV-IQPSQTL------AAGFHRGKQEDAHEFLMFIVDAM-KKACLPGHKQVDHDS 187

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  + H++F G  RS + C+ C   S TFDP +D +LD+   Q                
Sbjct: 188 EDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIRAAQ---------------- 231

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                          ++   L++  +PE L  +  + C  C  +  + K  ++     V 
Sbjct: 232 ---------------SVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVL 276

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF   +  K+++ V    Q+P  LDM PY+S                       N
Sbjct: 277 ILVLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ---------------------N 311

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMF 555
                + L+AV+ H G     GHY+++++    +WYK DDA +T  +  +V + Q Y++F
Sbjct: 312 TGPLVYVLYAVLVHAGWSCHNGHYLSFVKAPGGQWYKMDDAKVTACSIASVLSQQAYVLF 371

Query: 556 YVQKMLYYKASE 567
           Y+QK    + SE
Sbjct: 372 YIQKSQLERCSE 383


>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
           familiaris]
          Length = 395

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 173/391 (44%), Gaps = 78/391 (19%)

Query: 191 NGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACD 250
           N    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S N V   L  +
Sbjct: 49  NSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSN-VHTALMEE 107

Query: 251 LDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
              +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V +  
Sbjct: 108 FAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVT 167

Query: 310 HKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
            +P+S                         D  I   +F G L+S + C  CG+ ST FD
Sbjct: 168 VRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCSTVFD 226

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P  D SL +                           + +     TL  C+  FT+ + L 
Sbjct: 227 PFWDLSLPI---------------------------AKRGYPEVTLTDCMRLFTKEDVLD 259

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLD 467
            D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ FPL  LD
Sbjct: 260 GDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLRDLD 317

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-- 525
           +  + S                       N   + + L+AV  H+G    GHY  Y R  
Sbjct: 318 LREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYCRSP 355

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 356 VTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 386


>gi|444514644|gb|ELV10629.1| Putative ubiquitin carboxyl-terminal hydrolase 50 [Tupaia
           chinensis]
          Length = 373

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 172/390 (44%), Gaps = 72/390 (18%)

Query: 182 SPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN 241
           +P  S +  N     G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     +  +
Sbjct: 27  TPALSEADENQSHIEGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDCS 86

Query: 242 GVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGI 301
            V    A     + + ++ GD    SP  F  +            QQDA EF I +L+ +
Sbjct: 87  EVATAFA----YLMTDMWLGDSDCVSPEIFRSALGNLYPEFMKKTQQDAQEFLIYVLNEL 142

Query: 302 HEKVEKDQHKPRS---QGNGDCC---------IAHRVFSGILRSDVMCMACGFTSTTFDP 349
           HE + K  H+ RS   +    CC         I  ++F G LR D++C+ C       D 
Sbjct: 143 HEAL-KTYHRKRSYEKRSTQQCCRKVIASETSIITQLFEGQLRYDIVCLKC-------DN 194

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
           C         N+  S+ +    S++ C                +L  CL  F + + L  
Sbjct: 195 CA------HKNEVFSILSLPIPSDYEC----------------SLQDCLQCFFQQDTLTW 232

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDM 468
           + +  C  C   QE+  + SI K P V  FH+KRF+   + K  RK+   + +PL+ LD+
Sbjct: 233 NNQMHCSLCDTMQETAVRASISKAPKVVIFHLKRFDIQGMTK--RKLRTDIHYPLTNLDL 290

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--L 526
            PY+                       +     ++ L AVV H G LD GHY  + +  +
Sbjct: 291 TPYICP---------------------VARKHPKYSLCAVVNHFGDLDGGHYTAFCKNSV 329

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           +  WY  DD  ++E+ +++V+ A  Y++FY
Sbjct: 330 TQAWYSFDDTRVSEIPDSSVQTATAYLLFY 359


>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
          Length = 550

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 220/560 (39%), Gaps = 114/560 (20%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATK-TSSACSHEIAVDVDRAELFCC 124
           C VCG    P L  C+ C AV C       +VA HA +   +   H + +D +   +FC 
Sbjct: 31  CAVCGTEKSPWL--CLHCGAVHC-----GRYVAGHALQHYETNTQHCVCIDCENLAVFCY 83

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLR------------KRRRIDYRPWSPD-L 171
            C + V +      +      +  +    EN              +R  + +    PD L
Sbjct: 84  TCDEYVVNDTTSGQIEKIRRVTFRKDEHKENETSWNTSPSTTPSSRRDDVGHDNDDPDAL 143

Query: 172 RERSLMVNNASP---------IDSMS----------SSNGDLPRGLRGLNNLGNTCFMNS 212
            +  ++V N  P         +D+ S          SS     + + GL NLGNTCFMN 
Sbjct: 144 WKAEVVVRNLRPRTARKRLHALDASSADNRPATKRRSSKSTKEKKVVGLRNLGNTCFMNV 203

Query: 213 VLQAL-------------------------FHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
           VLQ+                             P  R   ++    +    S       L
Sbjct: 204 VLQSFNNISHFCEYLTQMPCLEGIAFDEASLEPPTHRGRIVTPGRAKEMSMSDA----LL 259

Query: 248 ACDLDTMFSAIFCG--DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
           A +L  +   +  G  +    SP     + W+       Y+QQDAHEF   MLD +H ++
Sbjct: 260 AEELRKVLLGLSLGGSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTEL 319

Query: 306 ----EKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
                +  H+P     G   I   VF G L S V CM C   S T +P  D SLD+ P++
Sbjct: 320 LQLLPRLGHEPPGL-RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI-PDR 377

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
              ++  + +    C                +L   L RF + E L   + +FC  C  +
Sbjct: 378 ---LQRRTKEQEEVC----------------SLTYSLTRFFKVEELADSELYFCDNCMGK 418

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSR 480
           Q S K+  I +LP V C HIKRF   +  +   KVD  + FP+ SLDM+ +    +  +R
Sbjct: 419 QRSTKRFWIHRLPNVLCLHIKRFRWCNSYR--SKVDTQVDFPMESLDMSAFTVRGMTGTR 476

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWIT 539
            G               + S  ++L AV+ H G     GHY  +     +W+  +D+ + 
Sbjct: 477 LG--------------AQNSHLYDLAAVIVHHGSGAGTGHYTAFAVHDGQWFHFNDSSVR 522

Query: 540 EVNENTVRAAQGYMMFYVQK 559
             +  +V   + Y++FYV+K
Sbjct: 523 PASTESVAKCKPYILFYVRK 542


>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
          Length = 1054

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 159/361 (44%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSQEHARNCHQGG----FCMLCVMQNHIIQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSLCKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ SI +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYLCAKCKKKVPASKRFSIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                      EP
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS--------------------GEP 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            + + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 VT-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
          Length = 1016

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 66/362 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS LQ L +T PL NY L+  H++  C        C+ C +      +F
Sbjct: 84  GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSK-TCHEPG---FCMMCTMQNHIIQVF 139

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK-VEKDQHKPRSQGNG 318
                   P   L    R   +     Q+DAHEF    +D + +  +  ++   ++Q   
Sbjct: 140 ANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQA-- 197

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
                H++F G LRS V C+ C   S TFDP +D SL+++  Q                 
Sbjct: 198 -TTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTAQ----------------- 239

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         TL    ++F +PE+L  D  + C +C+    + K+ ++ +   V  
Sbjct: 240 --------------TLSKAFEQFVKPEQLDGDNAYKCSKCKKMVTASKRFTVHRSSNVLT 285

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF + +  K+++ V RY +    LD+ P++S S                      E
Sbjct: 286 ISLKRFTNFNGGKITKDV-RYAEH---LDLRPFMSQS--------------------HGE 321

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
           P   + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ ++  +  TV   Q Y++FY
Sbjct: 322 PQI-YALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFY 380

Query: 557 VQ 558
           ++
Sbjct: 381 IR 382


>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
 gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
          Length = 1060

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 162/364 (44%), Gaps = 65/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GN+C+ N+VLQ L  TPPL  YF+   H++  C +K     C  C+ +++     
Sbjct: 524 GLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSK-ECVNK---EWCFTCEFESLMLKAK 579

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH-KPRSQGNG 318
            G + P SP   L      AS L +  ++DAHEF    +D +     K+           
Sbjct: 580 EG-KSPLSPIGILSQLQNIASQLGTGREEDAHEFLRYAIDTMQSVCLKEAGVNALGSFEE 638

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           +  +    F G LRS + CM C + S   +  +D ++++E +                  
Sbjct: 639 ETTLIGLTFGGYLRSKIKCMKCHYKSERHERMMDLTVEIEGD------------------ 680

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       I  L   L RFT  E L  D K+ C +C+  +++ K+++I + P V  
Sbjct: 681 ------------IEKLEDALRRFTGTEILDGDNKYQCGRCKSYEKAKKKLTILEAPNVLT 728

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF+     K+++ +    +FP  LD+APY+S +                     ++
Sbjct: 729 IALKRFQSGKFGKLNKSI----RFPEILDLAPYMSGT---------------------SD 763

Query: 499 PSSEFELFAVVTHTGKLDA---GHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMM 554
            S  + L+ VV H   ++A   GHYV Y++ + NKW+K DD+ +T V    V     YM+
Sbjct: 764 KSPIYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFKIDDSTVTAVELERVLTKGAYML 823

Query: 555 FYVQ 558
            Y +
Sbjct: 824 LYAR 827


>gi|303284907|ref|XP_003061744.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457074|gb|EEH54374.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 390

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 163/372 (43%), Gaps = 60/372 (16%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           R   GL N GNTCF  S LQ L+HT     +F ++ H+   C +  G   C+ C+     
Sbjct: 60  RAPAGLRNSGNTCFAASALQCLYHTRLFTAHFATETHDAESCGAARGGTFCVTCEYQAHV 119

Query: 256 SAIFCGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH-----EKVEKDQ 309
                 D    +S  K   S  + A +     Q+D+HE+   +LD +H     E   +D 
Sbjct: 120 RKALDADPADAFSIGKLTSSIGKVAKHFVRGRQEDSHEYIRGLLDAMHVRWLKEHAGEDA 179

Query: 310 HKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
            K   Q   +  + + VF G    +V+C  CG  S  +   +D  +++      S++ +S
Sbjct: 180 EKTLDQRTQETTMTYHVFGGYTCGEVVCGDCGHHSRNYQSMIDVPVEVSARGAPSIE-AS 238

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
            K+N                           F   E L  + K+ C +C     + K   
Sbjct: 239 FKAN---------------------------FVDVETLDGNNKYKCGRCDAYVRATKGSK 271

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           I   P V    +KRF+   + + S K+ ++++FP+ LD++PY+SS            P +
Sbjct: 272 IHVSPNVLVVPLKRFQ---IGRFS-KITKWVEFPVHLDLSPYMSSDA----------PLE 317

Query: 490 GDESNTLNEPSSEFELFAVVTHT---GKLDAGHYVTYLRLSN--KWYKCDDAWITEVNEN 544
           GD   T       + L+ VV H    G   +GHYV++++L++   W KCDD  +TE +E 
Sbjct: 318 GDAPPT-------YALYGVVVHLDFCGSAHSGHYVSFVKLNDDVTWCKCDDGRVTETDEA 370

Query: 545 TVRAAQGYMMFY 556
           TV   + Y++FY
Sbjct: 371 TVLKQKAYLLFY 382


>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
          Length = 985

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 66/362 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS LQ L +T PL NY L+  H++  C        C+ C +      +F
Sbjct: 84  GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSK-TCHEPG---FCMMCTMQNHIIQVF 139

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK-VEKDQHKPRSQGNG 318
                   P   L    R   +     Q+DAHEF    +D + +  +  ++   ++Q   
Sbjct: 140 ANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQA-- 197

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
                H++F G LRS V C+ C   S TFDP +D SL+++  Q                 
Sbjct: 198 -TTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTAQ----------------- 239

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         TL    ++F +PE+L  D  + C +C+    + K+ ++ +   V  
Sbjct: 240 --------------TLSKAFEQFVKPEQLDGDNAYKCSKCKKMVTASKRFTVHRSSNVLT 285

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF + +  K+++ V RY +    LD+ P++S S                      E
Sbjct: 286 ISLKRFTNFNGGKITKDV-RYAEH---LDLRPFMSQS--------------------HGE 321

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
           P   + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ ++  +  TV   Q Y++FY
Sbjct: 322 PQI-YALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFY 380

Query: 557 VQ 558
           ++
Sbjct: 381 IR 382


>gi|45382531|ref|NP_990257.1| ubiquitin carboxyl-terminal hydrolase 2 [Gallus gallus]
 gi|3800760|gb|AAC68863.1| ubiquitin specific protease 46 [Gallus gallus]
          Length = 403

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 177/405 (43%), Gaps = 86/405 (21%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA-----CD 250
           RG  GL NLGNTC+MNS+LQ L +T  LR+Y L    N+Y     N  R+  A       
Sbjct: 16  RGSTGLRNLGNTCYMNSILQCLSNTKELRDYCL---QNQYLRDFNNNSRMRTAFMSEFAK 72

Query: 251 LDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
           L  +F      D +  SP++F     R+A     Y QQDA EF   +LDG+H +V +   
Sbjct: 73  LIQLFWTSSPNDSV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLV 130

Query: 311 KPRS---------------------QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDP 349
           +PR+                     Q   D  ++   F G L+S +    CG+ ST FDP
Sbjct: 131 RPRANADTLDHFPDDEKSRQMWRRYQEREDSPVSD-FFLGQLKSSLTSSECGYCSTAFDP 189

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
             D SL + P +G                           G  TLM CL  FT+ + L  
Sbjct: 190 FWDLSLPI-PKKGY--------------------------GEVTLMHCLPLFTKEDLLDG 222

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDM 468
           D+K  C +C+ R    K+ SI+K P +   H+KRF  + +R  + K+  ++ FPL  LD+
Sbjct: 223 DEKPTCCRCKARTRCTKKFSIQKFPKILLLHLKRFSEARIR--ASKLTTFVDFPLKDLDL 280

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN 528
             + S S                         + ++L+ V  H+G    GHY   L+  +
Sbjct: 281 REFASQSCNH----------------------AVYKLYGVSNHSGTTMGGHYHCLLKRPS 318

Query: 529 --KWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEKQGT 571
             +W+  +D+ +T ++   VR++  Y++FY      +  S   GT
Sbjct: 319 PAEWHSFNDSRVTPMSSTHVRSSDAYLLFYGWPAHPHACSRPPGT 363


>gi|224126461|ref|XP_002329560.1| predicted protein [Populus trichocarpa]
 gi|222870269|gb|EEF07400.1| predicted protein [Populus trichocarpa]
          Length = 809

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 169/369 (45%), Gaps = 60/369 (16%)

Query: 195 PRGL-RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           P G+  GL N GNTC++N+VLQ   HT PL     S  H    C+++    LC+  D   
Sbjct: 258 PTGVGAGLFNKGNTCYINAVLQCFTHTVPLVQALRSCNH-AMPCRTEGFCALCVIRD-HI 315

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
             S    G  +   P K + +    +S    Y+Q+DAHEF   +L+ +            
Sbjct: 316 ELSLASSGKIL--EPLKLVNNLDSISSFFRRYQQEDAHEFLQCLLERLERSCLDSSLTDD 373

Query: 314 SQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
              + D  I  RVF G L S + C  CG  S  ++P +D SL++E               
Sbjct: 374 ISSSQDKNIVERVFGGRLVSKLRCCNCGHFSDKYEPLIDLSLEIE--------------- 418

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRK 432
                +AD           TL   L+ FT  E++  S+ KF C+ C+      KQ+ + K
Sbjct: 419 -----DAD-----------TLQIALESFTNVEKIEDSETKFTCENCKEEVSREKQLMLDK 462

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
            P ++  H+KRF+         K+ ++++FPL LD+ PY++                   
Sbjct: 463 APSIAALHLKRFKIDGTS--VEKIGKHVEFPLELDLKPYIN------------------- 501

Query: 493 SNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQ 550
            N  N+   +++L+AVV H G  L +GHYV Y+R S + W+K DD  +++  E  V +  
Sbjct: 502 DNDSNDVGFKYQLYAVVVHKGYSLTSGHYVCYIRSSPDTWHKLDDPEVSKEREEFVLSQA 561

Query: 551 GYMMFYVQK 559
            Y++FY ++
Sbjct: 562 AYILFYARE 570


>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
           niloticus]
          Length = 1174

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 66/371 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTCF+NS LQ L +TPPL NY L+  H++  C        C+ C +      +F
Sbjct: 85  GLQNMGNTCFLNSALQCLTYTPPLANYMLTREHSK-TCHEPG---FCMMCTMQNHVIQVF 140

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK-VEKDQHKPRSQGNG 318
                   P   L    R A +     Q+DAHEF    +D + +  +   +   ++Q   
Sbjct: 141 ANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQA-- 198

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
                H+VF G LRS V C+ C   S TFDP +D +L++        KT+   S      
Sbjct: 199 -TSFIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDITLEI--------KTAPNVSK----- 244

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                              L++F +PE+L  +  + C +C+    + K+ +I +   V  
Sbjct: 245 ------------------ALEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSANVLT 286

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF + S  K+++ V +YL+    LD+ P++S S    +                  
Sbjct: 287 LSLKRFANFSGGKITKDV-KYLEH---LDLRPFMSQSQGEPQL----------------- 325

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ ++  +  TV   Q Y++FY
Sbjct: 326 ----YGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVLNQQAYVLFY 381

Query: 557 VQKMLYYKASE 567
           ++     K+ +
Sbjct: 382 IKSTDVKKSGD 392


>gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens]
          Length = 1118

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 182/405 (44%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 758  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 817

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  +
Sbjct: 818  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLL 874

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 875  FLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 934

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S  F+  +  SL L                           S+  C   TL 
Sbjct: 935  QCLTCHKKSRAFEAFMYLSLPL--------------------------ASTSKC---TLQ 965

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 966  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 1023

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N       ++ LF+V  H G 
Sbjct: 1024 LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGG 1062

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1063 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1107


>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
          Length = 889

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 71  GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCPQGS----FCMLCVMQNHLVQAF 126

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 127 ANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYAKLDRQTQAT 186

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 187 TLV-HQIFGGCLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 224

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 225 ----------QAANIVRALELFVKPDALSGENAYMCARCKKKVPASKRFTIHRASNVLTL 274

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                      EP
Sbjct: 275 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS--------------------GEP 310

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 311 VV-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYL 369

Query: 558 Q 558
           +
Sbjct: 370 R 370


>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
          Length = 842

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++NSVLQ L +T P   Y  S +H +  C++      C  C L        
Sbjct: 3   GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKH-KSSCRTAG---FCALCALQNHVKTAL 58

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P++ + +    + +  +  Q+DAHE  +++L+ +H+          S    +
Sbjct: 59  QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYE 118

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S  FDP +D SLD+                      
Sbjct: 119 KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI---------------------- 156

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       ++L+  L  FT  E L G ++++ CQ+C+ +  + K+ +I K P V  
Sbjct: 157 ---------GKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLT 207

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF   + R+   K+D+ + F   LD+ P++S               D   SN    
Sbjct: 208 IHLKRFSPFNPRE---KIDKKVDFQPMLDLKPFIS---------------DSKVSNL--- 246

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G    +GHY  ++R S+  W+  DD  + +V E  V   + YM+FY
Sbjct: 247 ---KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 303

Query: 557 VQ 558
           V+
Sbjct: 304 VR 305


>gi|395503242|ref|XP_003755979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
            [Sarcophilus harrisii]
          Length = 1069

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 182/405 (44%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 709  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRS 768

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     + Y QQD+ E  +
Sbjct: 769  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLL 825

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 826  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 885

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 886  QCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 916

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++S+K++ I KLP V   H+KRF +    +  +K
Sbjct: 917  DCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 974

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G ++N        + LF+V  H G 
Sbjct: 975  LQTSVDFPLENLDLSQYVI----------------GPKNNL-----KRYNLFSVSNHYGG 1013

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1014 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1058


>gi|354473286|ref|XP_003498867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus
           griseus]
 gi|344241778|gb|EGV97881.1| Ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus griseus]
          Length = 1104

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHMVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDP------- 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 -VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
          Length = 618

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 196/454 (43%), Gaps = 87/454 (19%)

Query: 131 YDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID--YRPWSPDLRERSLMVNNASP-IDSM 187
           Y R   A  VL   T    S  PE L    R    Y  W  +  + S    + SP  D+M
Sbjct: 215 YGRKGSAPQVL---TQAPPSRVPEVLSPTYRPSGRYTLWEKNKGQASGASRSTSPGRDTM 271

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
           +S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    + +     L
Sbjct: 272 NSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSS-AHTAL 327

Query: 248 ACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
             +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V 
Sbjct: 328 MEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 387

Query: 307 KDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTST 345
           +   +P+                          D  I   +F G L+S + C  CG+ ST
Sbjct: 388 RVAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCST 446

Query: 346 TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPE 405
            FDP  D SL +                           + +     TLM C+  FT+ +
Sbjct: 447 VFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKED 479

Query: 406 RLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL- 464
            L  D+K  C +C+ R+  +K+ S+++ P +   H+KRF  S +R  + K+  ++ FPL 
Sbjct: 480 VLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLR 537

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL 524
            LD+  + S                       N   + + L+AV  H+G    GHY  Y 
Sbjct: 538 DLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYC 575

Query: 525 R--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 576 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 609


>gi|345804557|ref|XP_540463.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Canis lupus
           familiaris]
          Length = 1116

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS----FCMLCVMQNHMVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                     N  
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS---------------------NGE 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYLLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|395503240|ref|XP_003755978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
            [Sarcophilus harrisii]
          Length = 1100

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 84/406 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF    +  +Y   
Sbjct: 740  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYF----NRNFYQDD 795

Query: 240  KNGVRLC-----LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFF 294
             N   L      +A +   +  A++ G     SP  F  +  +     + Y QQD+ E  
Sbjct: 796  INRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELL 855

Query: 295  ISMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSD 334
            + ++DG+HE + K D  K   + N D                     I   +F G  +S 
Sbjct: 856  LFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKST 915

Query: 335  VMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
            V C+ C   S TF+  +  SL L                           S+  C   TL
Sbjct: 916  VQCLTCHKKSRTFEAFMYLSLPLA--------------------------STSKC---TL 946

Query: 395  MGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
              CL  F++ E+L  + +F+C  C+ R++S+K++ I KLP V   H+KRF +    +  +
Sbjct: 947  QDCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDG--RWKQ 1004

Query: 455  KVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
            K+   + FPL +LD++ Y+                 G ++N        + LF+V  H G
Sbjct: 1005 KLQTSVDFPLENLDLSQYVI----------------GPKNNL-----KRYNLFSVSNHYG 1043

Query: 514  KLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
             LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1044 GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1089


>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
          Length = 940

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++NSVLQ L +T P   Y  S +H +  C++      C  C L        
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKH-KSSCRTAG---FCALCALQNHVKTAL 156

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P++ + +    + +  +  Q+DAHE  +++L+ +H+          S    +
Sbjct: 157 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYE 216

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S  FDP +D SLD+                      
Sbjct: 217 KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI---------------------- 254

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       ++L+  L  FT  E L G ++++ CQ+C+ +  + K+ +I K P V  
Sbjct: 255 ---------GKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLT 305

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF   + R+   K+D+ + F   LD+ P++S S      G  F             
Sbjct: 306 IHLKRFSPFNPRE---KIDKKVDFQPMLDLKPFISDS-----KGADF------------- 344

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G    +GHY  ++R S+  W+  DD  + +V E  V   + YM+FY
Sbjct: 345 ---KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 401

Query: 557 VQ 558
           V+
Sbjct: 402 VR 403


>gi|344291363|ref|XP_003417405.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Loxodonta
           africana]
          Length = 1132

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHARSCHQGG----FCMLCVMQNHIIQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ SI +   V   
Sbjct: 277 ----------QAANIVRALEVFVKPDVLSGENAYMCAKCKKKVPASKRFSIHRASSVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V     +P  L++ PY+S S                     N  
Sbjct: 327 SLKRFANFTGGKITKDVG----YPEFLNIRPYMSQS---------------------NGE 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y+++SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKVSNGQWYQMNDSLVHLSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
           Group]
          Length = 874

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++NSVLQ L +T P   Y  S +H +  C++      C  C L        
Sbjct: 60  GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKH-KSSCRTAG---FCALCALQNHVKTAL 115

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P++ + +    + +  +  Q+DAHE  +++L+ +H+          S    +
Sbjct: 116 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYE 175

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S  FDP +D SLD+                      
Sbjct: 176 KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI---------------------- 213

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       ++L+  L  FT  E L G ++++ CQ+C+ +  + K+ +I K P V  
Sbjct: 214 ---------GKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLT 264

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF   + R+   K+D+ + F   LD+ P++S S      G  F             
Sbjct: 265 IHLKRFSPFNPRE---KIDKKVDFQPMLDLKPFISDS-----KGADF------------- 303

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G    +GHY  ++R S+  W+  DD  + +V E  V   + YM+FY
Sbjct: 304 ---KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360

Query: 557 VQ 558
           V+
Sbjct: 361 VR 362


>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
           garnettii]
          Length = 1120

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 159/361 (44%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 122 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSREHARSCHQGS----FCMLCVMQNHIVQAF 177

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 178 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 275

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 276 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 325

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +                      EP
Sbjct: 326 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQNS--------------------GEP 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ DD+ +   +   V + Q Y++FY+
Sbjct: 362 VM-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMDDSLVHPSSGKAVLSQQAYVLFYL 420

Query: 558 Q 558
           +
Sbjct: 421 R 421


>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
 gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
           Group]
 gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
          Length = 899

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++NSVLQ L +T P   Y  S +H +  C++      C  C L        
Sbjct: 60  GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKH-KSSCRTAG---FCALCALQNHVKTAL 115

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P++ + +    + +  +  Q+DAHE  +++L+ +H+          S    +
Sbjct: 116 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYE 175

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S  FDP +D SLD+                      
Sbjct: 176 KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI---------------------- 213

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       ++L+  L  FT  E L G ++++ CQ+C+ +  + K+ +I K P V  
Sbjct: 214 ---------GKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLT 264

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF   + R+   K+D+ + F   LD+ P++S S      G  F             
Sbjct: 265 IHLKRFSPFNPRE---KIDKKVDFQPMLDLKPFISDS-----KGADF------------- 303

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G    +GHY  ++R S+  W+  DD  + +V E  V   + YM+FY
Sbjct: 304 ---KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360

Query: 557 VQ 558
           V+
Sbjct: 361 VR 362


>gi|405968000|gb|EKC33109.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
          Length = 1129

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 171/389 (43%), Gaps = 97/389 (24%)

Query: 192  GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
            G++ R L GL NLGNTC+MNS +Q                      +S+ G    +A D 
Sbjct: 802  GNVGRALTGLRNLGNTCYMNSTIQ----------------------ESQLGYYGEIADDF 839

Query: 252  DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
              +  A++ G     +P  F Y   +H  + A   QQD+H+F   ++DG+HE + + + +
Sbjct: 840  SVIIRALWSGQYKCITPRDFKYVVGKHNPDFAGTTQQDSHDFLTFLMDGLHEGLNRVKKR 899

Query: 312  PR--SQGN---GDCCIAH---------------RVFSGILRSDVMCMACGFTSTTFDPCV 351
            P    Q N   GD   A                 +F G L+S +MC+ C   S  F   +
Sbjct: 900  PEIPEQDNDKMGDSQAAELAWKHHQLCNESIIVELFQGQLKSTLMCLHCQKMSVNFQAFM 959

Query: 352  DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
              +L + P               S  C              +L  CL  F + ERL    
Sbjct: 960  FLTLPIPP---------------SSRC--------------SLGECLKLFLKEERLTGSS 990

Query: 412  KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAP 470
            ++ C +C+V ++++K++ I +LP +    + RF +    +   K++ ++ FP  +LD+ P
Sbjct: 991  RWRCPRCKVDRDAVKKIDIWRLPRILLIGLNRFVYKG--QWREKINSFVDFPTRNLDLNP 1048

Query: 471  YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSN 528
            YL                +G +S       S + L+A   H+G LD GHY  Y R   + 
Sbjct: 1049 YL----------------EGPKSI-----KSSYRLYATSNHSGTLDGGHYTAYCRNPCTE 1087

Query: 529  KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            KW+K DD  ++E+ E+ VR++  Y+++Y 
Sbjct: 1088 KWFKYDDDHVSEMKESDVRSSLAYVLYYT 1116


>gi|11414862|dbj|BAB18534.1| deubiquitinating enzyme UBPY [Mus musculus]
          Length = 1080

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 184/405 (45%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 720  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 779

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 780  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 836

Query: 296  SMLDGIHE-----------KVEKDQHKPRSQGNGDCCIAHR---------VFSGILRSDV 335
            S++DG+HE           K E ++H     G       H+         +F G  ++ V
Sbjct: 837  SLMDGLHEDLNKADNRKRHKEENNEHLDEPAGGRARLQKHKQLNESIIRLLFQGQFKATV 896

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 897  QCLTCRRRSRTFEAFMYLSLPLA--------------------------STSKC---TLQ 927

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 928  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 985

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H G 
Sbjct: 986  LQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHYGG 1024

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1025 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1069


>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
           rotundus]
          Length = 396

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 180/406 (44%), Gaps = 86/406 (21%)

Query: 176 LMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
           L++N A   DS S+      +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R 
Sbjct: 43  LLLNKAK--DSKST------QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRD 94

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPY-SPAKFLYSWWRHASNLASYEQQDAHEFF 294
              S N     L  +   +   I+        SP++F     R+A     Y QQDA EF 
Sbjct: 95  LSHSSNA-HTALMEEFAKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFL 153

Query: 295 ISMLDGIHEKVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRS 333
             +LDG+H  V +   +P+S                         D  I   +F G L+S
Sbjct: 154 RFLLDGLHNAVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKS 212

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
            + C  CG+ ST FDP  D SL +                           + +     T
Sbjct: 213 SLTCTDCGYCSTVFDPFWDLSLPI---------------------------AKRGYPEVT 245

Query: 394 LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
           LM C+  FT+ + L  D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  +
Sbjct: 246 LMDCMRLFTKEDVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIR--T 303

Query: 454 RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            K+  ++ FPL  LD+  +                     S T N   + + L+AV  H+
Sbjct: 304 SKLTTFVNFPLRDLDLREF--------------------ASETTNH--AVYNLYAVSNHS 341

Query: 513 GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           G    GHY  Y R  ++ +W+  +D+ +T +  + VR +  Y++FY
Sbjct: 342 GTTVGGHYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFY 387


>gi|348525234|ref|XP_003450127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Oreochromis
           niloticus]
          Length = 1149

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 165/374 (44%), Gaps = 63/374 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R   QS      C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRVCHQSG----FCMICVMQNHIIQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D ++++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ ++ +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGD-------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYL 421

Query: 558 QKMLYYKASEKQGT 571
           +     K ++ Q T
Sbjct: 422 RIPETKKNADGQTT 435


>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
           caballus]
          Length = 1122

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 63/370 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCHQGG----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSSVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                      EP
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS--------------------GEP 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 VV-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYL 421

Query: 558 QKMLYYKASE 567
           +   + K+ E
Sbjct: 422 RIPGFKKSPE 431


>gi|170046356|ref|XP_001850734.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167869155|gb|EDS32538.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 638

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 182/415 (43%), Gaps = 83/415 (20%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF------LSDRHNRYYCQSKNGVRLCLAC 249
           R + GL NLGNTCFMNSVLQ+L +      YF       + +H +    S++     +  
Sbjct: 243 RRVVGLRNLGNTCFMNSVLQSLSNIQEFSCYFNAMPSLETGKHKQKAYHSRS-----MKE 297

Query: 250 DLDTMF------------SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISM 297
           +LD +F            S    G +   SP       W+       + Q DAHEF   M
Sbjct: 298 NLDDVFVVEELRKVLLNLSQGGDGSKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYM 357

Query: 298 LDGIHEKVEK----------------------DQHKPRS---------QGNGDCCIAHRV 326
           LD +H ++++                       + KP              G   I   V
Sbjct: 358 LDRLHTELQQVSFPVDGSGSGLAGGGGGGHKPGEGKPNPYNVPALSHLHTKGRNSIVTNV 417

Query: 327 FSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSS 386
           F GIL+S+V C+ CG  S   DP +D SLD+ P +  + +++             G +  
Sbjct: 418 FGGILQSEVRCLICGMESKKHDPFLDLSLDI-PEKFYTKESAVD----------GGGDKD 466

Query: 387 QNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEH 446
           ++  +  +  CL  FT  E L   + ++C  C+ +Q+S K+  IR+LP V C HIKRF  
Sbjct: 467 KDAPVCHISDCLSSFTEVEELAETELYYCNSCKCKQKSTKRFWIRRLPNVLCLHIKRFRW 526

Query: 447 SSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFEL 505
           ++  +   K+D  + FP+ +LDM+              +F   +G E+   N   + ++L
Sbjct: 527 NNFYRT--KIDLRISFPINALDMS--------------QFVLNNGPETRRSNSSCNVYDL 570

Query: 506 FAVVTHTGKLDA-GHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            AV+ H G   + GHY ++   +  W   +D  + EV+   V   + Y++FY+++
Sbjct: 571 AAVIVHHGNGSSCGHYTSFAINNGVWMHFNDHTVKEVSSAAVADCKPYILFYIKR 625


>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1113

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 165/374 (44%), Gaps = 63/374 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R   QS      C+ C +       F
Sbjct: 124 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQSG----FCMICVMQNHIIQAF 179

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 180 ANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKLDRQTQA- 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D ++++                      
Sbjct: 239 TTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIR--------------------- 277

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ ++ +   V   
Sbjct: 278 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTV 327

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                      EP
Sbjct: 328 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS--------------------GEP 363

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 364 VM-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYL 422

Query: 558 QKMLYYKASEKQGT 571
           +     K ++ Q T
Sbjct: 423 RIPETKKNADGQAT 436


>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
           rotundata]
          Length = 542

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 217/555 (39%), Gaps = 110/555 (19%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKT-SSACSHEIAVDVDRAELFCC 124
           C VCG      L  C+ C AV C       +VA HA K       H + +D +   +FC 
Sbjct: 29  CAVCGTEKSTWL--CLYCGAVHC-----GRYVAGHALKHHEENTQHCVCIDCENLAVFCY 81

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK------------RRRIDYRPWSPDLR 172
            C + V +      +      +  +    EN               R   D    +  L 
Sbjct: 82  TCDEYVVNDTTTGQIEKIRRVTFRKDEHKENEENWNTSSSTTPSSMRENSDNDNDADALW 141

Query: 173 ERSLMVNNASP------IDSMSSSNGD-------------LPRGLRGLNNLGNTCFMNSV 213
           +  ++V N  P      + S+  ++GD               + + GL NLGNTCFMN V
Sbjct: 142 KAEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKITKEKKVVGLRNLGNTCFMNVV 201

Query: 214 LQAL--------------------FHTPPL-RNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
           LQ+                     F  PP  R   ++    + +          LA +L 
Sbjct: 202 LQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMNDA-----LLAEELR 256

Query: 253 TMFSAIFCG--DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV----E 306
            +   +  G  +    SP       W+       Y+QQDAHEF   MLD +H ++     
Sbjct: 257 KVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLP 316

Query: 307 KDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
           +  H+P     G   I   VF G L S V CM C   S T +P  D SLD+ P++   ++
Sbjct: 317 RLGHEPLGL-RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI-PDR---LQ 371

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
             + +    C                +L   L RF + E L   + +FC  C  +Q S K
Sbjct: 372 RRTKEQEEVC----------------SLTYSLSRFFKVEELADSELYFCDNCMGKQRSTK 415

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I +LP V C HIKRF   +  +   KVD  + FP+ SLDM+ +    +  ++ G   
Sbjct: 416 RFWIHRLPNVLCLHIKRFRWCNSYR--SKVDTQVDFPMKSLDMSAFTVRGMTGTKLG--- 470

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                  SN     S  ++L AV+ H G     GHY  +     +W+  +D+ +     +
Sbjct: 471 ------ASN-----SHLYDLAAVIVHHGSGAGTGHYTAFAVHDGQWFHFNDSSVRPATTD 519

Query: 545 TVRAAQGYMMFYVQK 559
            V   + Y++FYV+K
Sbjct: 520 AVAKCKPYILFYVRK 534


>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
          Length = 1201

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 161/387 (41%), Gaps = 59/387 (15%)

Query: 197  GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR-HNRYYCQSKNGVRLCLACDLDTMF 255
            G  GL NLGNTC+MNS +Q L  T P   +F   R  +     +  G +  LA     + 
Sbjct: 842  GTSGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMVNPMGTKGVLALAFANIL 901

Query: 256  SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK---- 311
              ++ G+    SP  F  S   HA   +  EQ D+ EF   +LDG+HE + +   K    
Sbjct: 902  RDMWQGEGGTLSPVTFRRSICSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRILQKRNIE 961

Query: 312  --PRSQGN-------------------GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPC 350
              P  +                      D  +    F G  R+ + C+ C  TSTT++  
Sbjct: 962  STPEREAELEKLPTQIASEQEWQIYRMRDDSLIVDFFQGQYRNRMECLTCHKTSTTYNTF 1021

Query: 351  VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
            +  +L +   + S +                           TL  C+D F + E +   
Sbjct: 1022 MYLTLPIPTGRASKV---------------------------TLQHCIDAFVKEEVMEKS 1054

Query: 411  QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMA 469
              + C  C+  +++ KQ+S+ +LP V   H+KRF  S+    + K++ +++FPL  LD+ 
Sbjct: 1055 DAWNCPHCKALRKATKQLSLSRLPPVLLIHLKRF--SAKGPFTDKIETFVEFPLKGLDLT 1112

Query: 470  PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNK 529
             Y+   +     G    P   D+      P   ++L+AV  H G L  GHY  ++     
Sbjct: 1113 NYMPPPLPPGAIG--VPPLSPDDPR-CQLPPYRYDLYAVTNHFGTLSTGHYTAFIASRGG 1169

Query: 530  WYKCDDAWITEVNENTVRAAQGYMMFY 556
            W  CDD+ +T  +   V     Y++FY
Sbjct: 1170 WLYCDDSRVTPADAKDVVGKPAYILFY 1196


>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
          Length = 940

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 62/362 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++NSVLQ L +T P   Y  S +H +  C++      C  C L        
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKH-KSSCRTAG---FCALCALQNHVKTAL 156

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                  +P++ + +    + +  +  Q+DAHE  +++L+ +H+          S    +
Sbjct: 157 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYE 216

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S  FDP +D SLD+                      
Sbjct: 217 KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGK-------------------- 256

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       ++L+  L  FT  E L G ++++ CQ+C+ +  + K+ +I K P V  
Sbjct: 257 -----------ATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLT 305

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
            H+KRF   + R+   K+D+ + F   LD+ P++S S      G  F             
Sbjct: 306 IHLKRFSPFNPRE---KIDKKVDFQPMLDLKPFISDS-----KGADF------------- 344

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFY 556
              ++ L+ V+ H G    +GHY  ++R S+  W+  DD  + +V E  V   + YM+FY
Sbjct: 345 ---KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 401

Query: 557 VQ 558
           V+
Sbjct: 402 VR 403


>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
 gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
          Length = 342

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 81/391 (20%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           G+ GL NLGNTCFMNS+LQ L +T  L ++ L + ++R +   K+ +   L     ++  
Sbjct: 1   GVVGLKNLGNTCFMNSILQCLSNTKALTSFVLDNSYSR-FISGKSSMHGKLMEAYASLMR 59

Query: 257 AIFCGD--RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--------- 305
           +++  D      SPA F     R A     Y QQDA EF   +L G+HE +         
Sbjct: 60  SMWKSDTKETALSPATFKSQIQRFAPRFVGYSQQDAQEFLRFLLAGLHEDLLHNSREKPK 119

Query: 306 -----EKDQHKPRSQG--------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVD 352
                E D+ +P  +         + D      +F G L+S + C  C   S TFDP  D
Sbjct: 120 IISTEEYDELQPEDKAVYCWKLYKSTDDSKVAELFVGQLKSTLECTVCKNQSVTFDPFWD 179

Query: 353 FSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQK 412
            SL +        K S+                       TL+ CL  FTR E L  D  
Sbjct: 180 LSLPIP-------KISTI----------------------TLLDCLKLFTREETLSGDNM 210

Query: 413 FFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPY 471
             C +C+ +    K++S++K P +   H KRF     R    K++  + FP+  LD+  +
Sbjct: 211 PTCSKCKTKTVCTKKLSVQKFPQILVIHFKRFSGIHYR---TKLNTLIDFPIDKLDLLNF 267

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRL--SNK 529
                                + T +  S ++ L+A+  H+G    GHY  Y +   +  
Sbjct: 268 ---------------------AGTTSTISCKYNLYAISNHSGSTVGGHYTAYCKSPHTQT 306

Query: 530 WYKCDDAWITEVNENTVRAAQGYMMFYVQKM 560
           WY  +D  +  V+ N V+++Q Y++FY Q++
Sbjct: 307 WYMFNDTRVQPVSSNEVKSSQAYVLFYEQQL 337


>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2; AltName:
           Full=Ubiquitin-specific-processing protease testis;
           Short=UBP-t
 gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
 gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
 gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
          Length = 618

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 196/454 (43%), Gaps = 87/454 (19%)

Query: 131 YDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID--YRPWSPDLRERSLMVNNASP-IDSM 187
           Y R   A  VL   T    S  PE L    R    Y  W  +  + S    + SP  D+M
Sbjct: 215 YGRKGSAPQVL---TQAPPSRVPEVLSPTYRPSGRYTLWEKNKGQASGPSRSTSPGRDTM 271

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
           +S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    + +     L
Sbjct: 272 NSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSS-AHTAL 327

Query: 248 ACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
             +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V 
Sbjct: 328 MEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 387

Query: 307 KDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTST 345
           +   +P+                          D  I   +F G L+S + C  CG+ ST
Sbjct: 388 RVAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCST 446

Query: 346 TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPE 405
            FDP  D SL +                           + +     TLM C+  FT+ +
Sbjct: 447 VFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKED 479

Query: 406 RLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL- 464
            L  D+K  C +C+ R+  +K+ S+++ P +   H+KRF  S +R  + K+  ++ FPL 
Sbjct: 480 VLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLR 537

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL 524
            LD+  + S                       N   + + L+AV  H+G    GHY  Y 
Sbjct: 538 DLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYC 575

Query: 525 R--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           R  ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 576 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 609


>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
          Length = 1098

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 169/387 (43%), Gaps = 63/387 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P++ +S   G + R   GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q    
Sbjct: 104 PVERLSLRWGRVYRVGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGS-- 161

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +       F        P  F+    + A +     Q+DAHEF    +D + 
Sbjct: 162 --FCMLCVMQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQ 219

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +       K   Q      + H++F G LRS V C  C   S T+DP +D +L++     
Sbjct: 220 KACLSGCAKLDRQTQATTLV-HQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR---- 274

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        + ++  L+ F +P+ L  +  + C +C+ + 
Sbjct: 275 ---------------------------QAANIVRALELFVKPDVLSGENAYMCAKCKKKV 307

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ +I +   V    +KRF + S  K+++ V     +P  L++ PY+S S       
Sbjct: 308 PASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS------ 357

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITE 540
                          EP   + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +  
Sbjct: 358 --------------GEPVM-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHA 402

Query: 541 VNENTVRAAQGYMMFYVQKMLYYKASE 567
            N   V   Q Y++FY++     K+ E
Sbjct: 403 SNIKVVLNQQAYVLFYLRIPGSKKSPE 429


>gi|379030631|ref|NP_001243800.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 3 [Homo
           sapiens]
 gi|187653918|sp|A6NCW0.1|U17L3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
           3; AltName: Full=Deubiquitinating enzyme 17-like protein
           3; AltName: Full=Ubiquitin thioesterase 17-like protein
           3; AltName: Full=Ubiquitin-specific-processing protease
           17-like protein 3
          Length = 530

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+ N+ LQ L +T PL NY LS  H++  CQ     + C+ C +    +   
Sbjct: 81  GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQ-TCQRP---KCCMLCTMQAHITWAL 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                 +SP   +      AS     +Q+D HEF +  +D + +K     HK     + D
Sbjct: 137 ------HSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  +   +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVAGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
 gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
          Length = 1101

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 169/387 (43%), Gaps = 63/387 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P++ +S   G + R   GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q    
Sbjct: 106 PVERLSLRWGRVYRVGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGS-- 163

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +       F        P  F+    + A +     Q+DAHEF    +D + 
Sbjct: 164 --FCMLCVMQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQ 221

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +       K   Q      + H++F G LRS V C  C   S T+DP +D +L++     
Sbjct: 222 KACLSGCAKLDRQTQATTLV-HQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR---- 276

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        + ++  L+ F +P+ L  +  + C +C+ + 
Sbjct: 277 ---------------------------QAANIVRALELFVKPDVLSGENAYMCAKCKKKV 309

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ +I +   V    +KRF + S  K+++ V     +P  L++ PY+S S       
Sbjct: 310 PASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS------ 359

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITE 540
                          EP   + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +  
Sbjct: 360 --------------GEPVM-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHA 404

Query: 541 VNENTVRAAQGYMMFYVQKMLYYKASE 567
            N   V   Q Y++FY++     K+ E
Sbjct: 405 SNIKVVLNQQAYVLFYLRIPGSKKSPE 431


>gi|351698096|gb|EHB01015.1| Ubiquitin carboxyl-terminal hydrolase 36 [Heterocephalus glaber]
          Length = 1107

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 63/370 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H+R   Q       C+ C +       F
Sbjct: 125 GLHNLGNTCFLNATVQCLTYTPPLANYLLSREHSRSCHQGS----FCMLCVMQNHIVQAF 180

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 181 ANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYAKLDRQTQAT 240

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 241 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 278

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 279 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 328

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S             +GD        
Sbjct: 329 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------NGDPVM----- 366

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 367 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 423

Query: 558 QKMLYYKASE 567
           +     K+ E
Sbjct: 424 RIPSSKKSPE 433


>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
          Length = 762

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 172/394 (43%), Gaps = 89/394 (22%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GL GL N+GNTCFMNSV+Q L +T PL  Y L    N  Y    N     +   L   FS
Sbjct: 421 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLL----NEQYLADINTTTSSMKGALIKAFS 476

Query: 257 AIF------CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
            +        GD +  + A       R A     Y QQDA EF   +L+G+HE V +   
Sbjct: 477 QVIHELWEVGGDHVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTT 535

Query: 311 K-PRSQGN---------------------GDCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
           K P   G+                      D  I   VF G LRS + C +C   S T D
Sbjct: 536 KLPPIHGDIPDSYTDMQKAVESWKRYLRSEDSMIVD-VFVGQLRSSLHCTSCDHVSVTLD 594

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P  D SL + P +  ++K                           L  CL+ FTR E L 
Sbjct: 595 PFWDLSLPI-PGRSGTVK---------------------------LSQCLEHFTREEVLD 626

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LD 467
            D+K  C +CQ+R++  K  SI+K P +   H+KRF  S + +   K++  + FPL+ LD
Sbjct: 627 GDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRF--SPMERFRGKLNVMVDFPLTGLD 684

Query: 468 MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR-- 525
           ++ + +  +                      P   + L+ V  H+G   +GHY  Y +  
Sbjct: 685 LSAFAAPRV----------------------PGCTYNLYGVANHSGTTYSGHYTAYCKHP 722

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            S +W++ +D+ ++ V+  +V +++ Y++FY Q+
Sbjct: 723 YSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYEQQ 756


>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
          Length = 503

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 165/371 (44%), Gaps = 76/371 (20%)

Query: 195 PRGL-RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           P G+  GL N+GNTC+MN+ LQ L +TPPL NY LS  H++  C+       C+ C ++T
Sbjct: 51  PYGIGAGLQNMGNTCYMNATLQCLTYTPPLANYMLSQAHSQ-TCRPSG---FCMLCAVET 106

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK---DQH 310
            F          +SP   +      A+      Q+DAHEF +  +D +         +  
Sbjct: 107 HFLWAL------HSPGDVIQPCQALAAAFHRNRQEDAHEFLVFTVDALKAAGLPGLMNVV 160

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
            P+     D  ++H++F G  +S + C+ C   S T DP +D +LD++            
Sbjct: 161 GPKE----DKSLSHQIFGGYWKSQIKCLQCQGVSDTLDPYLDIALDIK------------ 204

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
                    AD +  +           L++  +PE L  +  + C  C  +  + K + +
Sbjct: 205 --------TADSVQQA-----------LEQLVKPEELDGENAYECGICLKKTAASKTLVL 245

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
           +    V  F +KRF   +  K++R+V    Q+P  LDM PY+S    R        P   
Sbjct: 246 QSSGNVLIFVLKRFSDFTGEKIARQV----QYPECLDMRPYMSQQSGR--------PL-- 291

Query: 491 DESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRA 548
                      E+ L+A + H G +   GHY  Y++  N  WYK DDA +T  +  +V  
Sbjct: 292 -----------EYVLYAALVHVGLRCQKGHYFCYVKAGNGHWYKMDDAKVTACDITSVLN 340

Query: 549 AQGYMMFYVQK 559
              Y++FYVQK
Sbjct: 341 QSAYVLFYVQK 351


>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Ailuropoda melanoleuca]
          Length = 531

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 159/367 (43%), Gaps = 69/367 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+VLQ L +TPPL +  LS +H     Q+      C+ C L    +   
Sbjct: 81  GLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQ----QTCGKQTFCMLCALQAHMTRAL 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
           C       P   +    R  +   +++Q+DAHEF +  L G  ++    + KP    + D
Sbjct: 137 C------HPGDVIRPLPRLLAAFHTHQQEDAHEFLMFTL-GAMQQACLPEDKPSDPQSED 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G  RS + C+ C   S+T DP +D SLD+E  Q  S               
Sbjct: 190 ATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQ-------------- 235

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                             L++  +PE+L  +  + C  C  +  + K +++     V   
Sbjct: 236 -----------------ALEQLVKPEKLDGENAYHCNTCLGKVPASKMLTLHTPSKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  KM++ V     +P  LDM PYL           R  P            
Sbjct: 279 VLKRFSDFTGNKMAKDV----HYPEHLDMQPYLCE--------QRAGPL----------- 315

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G    +GHY  +++  N +WYK DD+ +T  +     +   Y++FY+
Sbjct: 316 --VYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALSQHAYVLFYI 373

Query: 558 QKMLYYK 564
           QK  + +
Sbjct: 374 QKTEWER 380


>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
          Length = 465

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 178/407 (43%), Gaps = 75/407 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 17  PSAPELHQDEAQVVEELAANGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L S +       
Sbjct: 77  DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHTHSGDVM--KPSQNLTSAFHK----- 128

Query: 284 SYEQQDAHEFFISMLDGIHEKVEK--DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACG 341
              ++DAHEF +  L+ +HE   +   Q +P S+   D    H +F G  RS + C  C 
Sbjct: 129 --RKEDAHEFLMFTLETMHESCLQVHRQSEPTSE---DSSPIHDIFGGWWRSQIKCHHCQ 183

Query: 342 FTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRF 401
            TS ++DP +D  LD+                                 + ++   L   
Sbjct: 184 GTSYSYDPFLDIPLDIS-------------------------------SVQSVKQALQDT 212

Query: 402 TRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQ 461
            + E L  +  ++C +C+ ++ + K + +   P V    +KRF  S    M +K+DR + 
Sbjct: 213 EKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRFSGS----MGKKLDRKVS 268

Query: 462 FPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHY 520
           +P  LD+ PYLS             P  G            + L+AV+ H G    +GHY
Sbjct: 269 YPEFLDLKPYLSQ------------PTGG---------PLPYALYAVLVHEGATCHSGHY 307

Query: 521 VTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
              ++  + KWYK DD  +T  +  +V     Y++FYVQ+    K S
Sbjct: 308 FCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQNDLKKGS 354


>gi|301766030|ref|XP_002918424.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
           [Ailuropoda melanoleuca]
          Length = 1116

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS----FCMLCLMQNHMVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRASNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                     N  
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS---------------------NGE 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
          Length = 729

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 167/366 (45%), Gaps = 73/366 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C + T  +   
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQTHITQAL 166

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK--PRSQGN 317
                   P   +    R A +     Q+DAHEF    +D + +      +K    +Q  
Sbjct: 167 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 226

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
              C   ++F G LRS V C+ C   S TFDP +D +L+++  Q      S TK+     
Sbjct: 227 TLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------SVTKA----- 272

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                               L++F +PE+L  +  + C +C+    + K+ +I +   V 
Sbjct: 273 --------------------LEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVL 312

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF + +  K+++ V    ++P  LD+ PY+S                        
Sbjct: 313 TISLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------ 344

Query: 498 EPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGY 552
           +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +   V   Q Y
Sbjct: 345 QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAY 404

Query: 553 MMFYVQ 558
           ++FY++
Sbjct: 405 VLFYIR 410


>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
          Length = 434

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 161/391 (41%), Gaps = 67/391 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYY-CQSKNGVRLCLACDLDTMFSAI 258
           GL NLGNTC+MN+ LQ L  T P   +FL +R  R     +  G R  LA     M   +
Sbjct: 72  GLKNLGNTCYMNAPLQCLSATVPFARFFLENRWQRAVNTVNPLGTRGQLAGAFAKMVQEM 131

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP------ 312
           +  +     P  F  S   +A + A  +Q DA EF   +LDG+HE + +   KP      
Sbjct: 132 WQANFTYLDPTNFRRSVCHYAPSFAGGDQHDAQEFISFLLDGLHEDLNRILQKPANDDPT 191

Query: 313 ---------------------RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
                                R Q   D  +    F G  R+ + CM C  TSTT++  +
Sbjct: 192 PEHEAELERLPQQIAGEQEWQRYQRRDDSLVVD-YFQGQFRNKLECMTCHKTSTTYNAFM 250

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
             SL +   +G S                            TL  C+D F + E +    
Sbjct: 251 YLSLPIPTGRGMSK--------------------------VTLQQCMDAFVKEEIMEKGD 284

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAP 470
            + C  C   +++ KQ+SI +LP V   H+KRF +        K++  + FPL  LD+  
Sbjct: 285 AWKCPHCMALRKATKQLSISRLPPVLLIHLKRFSYKG--PFVDKLETLVDFPLKDLDLTN 342

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSE-----FELFAVVTHTGKLDAGHYVTYLR 525
           Y+ S +           F       L++P S+     +EL+AV  H G L +GHY  ++ 
Sbjct: 343 YMPSPLPPGVDKG----FSQSSPIKLDDPRSQIPPYRYELYAVTNHFGSLTSGHYTAFIA 398

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
               W  CDD+ ++      + A   Y++FY
Sbjct: 399 SKGSWVYCDDSRLSNAEGREIVAKPAYILFY 429


>gi|281342803|gb|EFB18387.1| hypothetical protein PANDA_006891 [Ailuropoda melanoleuca]
          Length = 1117

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS----FCMLCLMQNHMVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRASNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                     N  
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS---------------------NGE 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|307103141|gb|EFN51404.1| hypothetical protein CHLNCDRAFT_55161 [Chlorella variabilis]
          Length = 1087

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 88/151 (58%), Gaps = 7/151 (4%)

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
             P GLRGLNNLGNTCFMNSVLQAL H+P LRN+FL D H R  C    G   C+ C+LD
Sbjct: 234 GFPAGLRGLNNLGNTCFMNSVLQALLHSPLLRNHFLLDAHPRAACTLAAGGGACVLCELD 293

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASN-LASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
            +FSA + G R  YSPA FLY+WW+ A   LA Y+QQD+HEF    L+ +          
Sbjct: 294 GVFSAAYSGRRAAYSPAPFLYAWWQLAGGQLAGYQQQDSHEFLCFTLEMMAAADGDPGGP 353

Query: 312 PRSQGNG------DCCIAHRVFSGILRSDVM 336
                          C++ R+F G LRSD+M
Sbjct: 354 AAGAAGTASFPPPSACLSRRLFGGTLRSDLM 384



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 71/92 (77%), Gaps = 2/92 (2%)

Query: 392 STLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS-SVR 450
           ++L+GCL+RFT+ ERLG+ +++ C++C   Q ++KQ+S+R LP +  FH KRFEH+   R
Sbjct: 710 ASLLGCLNRFTQEERLGAGERWACERCGSGQHAVKQLSLRHLPPLLAFHAKRFEHAGGFR 769

Query: 451 KMSRKVDRYLQFPLS-LDMAPYLSSSILRSRF 481
            +++K+D YL FPLS LDM PYL+S+ LRSR+
Sbjct: 770 AVAKKLDTYLSFPLSGLDMRPYLASTKLRSRY 801



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 8/42 (19%)

Query: 503 FELFAVVTHTGKLDAGHYVTYLRLSN-KWYKCDDAWITEVNE 543
           ++L+AVV        GHYV Y+R ++ +WY CDDAW+T   +
Sbjct: 874 YDLYAVV-------GGHYVAYVRAADGRWYLCDDAWVTAAQQ 908


>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
          Length = 604

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 140/558 (25%), Positives = 214/558 (38%), Gaps = 107/558 (19%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATK-TSSACSHEIAVDVDRAELFCC 124
           C VCG    P L  C+ C +V C       +VA HA +   +   H + +D +   +FC 
Sbjct: 82  CAVCGTEKSPWL--CLHCGSVHC-----GRYVAEHALQHYETNTQHCVCIDCESLAVFCY 134

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK-------------------------- 158
            C + V +      +      +  +    EN                             
Sbjct: 135 TCDEYVVNDTTSGQIEKIRRVTFRKDEHKENDESWSTSPPTTPPSSRSRDGGGDDHDNDD 194

Query: 159 -----RRRIDYRPWSPDLRERSLMVNNASPIDSM----SSSNGDLPRGLRGLNNLGNTCF 209
                +  +  R   P    + L   +AS  D+      SS     + + GL NLGNTCF
Sbjct: 195 PDALWKAEVVVRNLRPRTARKRLHSLDASSADNRPAKRRSSKSTKEKKVVGLRNLGNTCF 254

Query: 210 MNSVLQA----------LFHTPPLRNYFLSD-----RHNRYYCQSKNGVRL-----CLAC 249
           MN VLQ+          L   P L      +      H            +      LA 
Sbjct: 255 MNVVLQSFNNISHFCEYLTQMPCLEGIAFDESTGPPTHRGRIVTPGRAKEMSMSDALLAE 314

Query: 250 DLDTMFSAIFCG--DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-- 305
           +L  +   +  G  +    SP     + W+       Y+QQDAHEF   MLD +H ++  
Sbjct: 315 ELRKVLLGLSLGGSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQ 374

Query: 306 --EKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
              +  H+P     G   I   VF G L S V CM C   S T +P  D SLD+ P++  
Sbjct: 375 LLPRLGHEPLGL-RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI-PDR-- 430

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
            ++ S TK                   + +L   L RF + E L   + +FC  C  +Q 
Sbjct: 431 -LQRSRTKEQEE---------------VCSLTYSLTRFFKVEELADSELYFCDNCMGKQR 474

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFG 482
           S K+  I +LP V C HIKRF   +  +   KVD  + FP+ SLDM+ +    +  +R G
Sbjct: 475 STKRFWIHRLPNVLCLHIKRFRWCNSYR--SKVDTQVDFPMESLDMSAFTVRGVTGTRLG 532

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEV 541
                          + S  ++L AV+ H G     GHY  +     +W+  +D+ +   
Sbjct: 533 --------------AQNSHLYDLAAVIVHHGSGAGTGHYTAFAVHDGQWFHFNDSSVRPA 578

Query: 542 NENTVRAAQGYMMFYVQK 559
             + V   + Y++FYV++
Sbjct: 579 TTDAVAKCKPYILFYVRR 596


>gi|28972047|dbj|BAC65477.1| mKIAA0055 protein [Mus musculus]
          Length = 1108

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 748  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 807

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 808  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 864

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 865  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 922

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 923  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 953

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 954  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1011

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 1012 QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1050

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1051 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1097


>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
          Length = 505

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 172/398 (43%), Gaps = 70/398 (17%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 16  PDAPELHQDEAQVVEELTTNGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 75

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L       S   
Sbjct: 76  DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHSHSGDVM--KPSQIL------TSAFH 126

Query: 284 SYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFT 343
            ++Q+DAHEF +  L+ +HE   +  H+       D    H +F G  RS + C+ C  T
Sbjct: 127 KHQQEDAHEFLMFTLETMHESCLQ-VHRQSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGT 185

Query: 344 STTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTR 403
           S TFDP +D  LD+   Q  +     T                                +
Sbjct: 186 SHTFDPFLDVPLDISSAQSVNQALWDTG-------------------------------K 214

Query: 404 PERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP 463
            E L  +  ++C +C+ +  + K + +   P V    +KRF   +  K+ RKV     +P
Sbjct: 215 SEELLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVS----YP 270

Query: 464 LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVT 522
             LD+ PYLS             P  G            + L+AV+ H G   ++GHY  
Sbjct: 271 EFLDLKPYLSE------------PTGG---------PLPYALYAVLVHDGATSNSGHYFC 309

Query: 523 YLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 310 CVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 347


>gi|449679016|ref|XP_002157785.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like, partial
           [Hydra magnipapillata]
          Length = 372

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 179/379 (47%), Gaps = 73/379 (19%)

Query: 164 YRPWSPDLRERSL----MVNNASPI--------DSMSSSNGDLPRGLRGLNNLGNTCFMN 211
           Y+P +     R +    +VNNA P         +++ +    + +   GL NLGNTCF+N
Sbjct: 53  YKPVNAGYMPRKIKSDSIVNNAIPKPSVVLYPEENVENKWKAIQKVGPGLANLGNTCFLN 112

Query: 212 SVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGD-RMPYSPAK 270
           SVLQ L +TPPL NY +S+ H     Q    V  C+ C+L   F+ +F G+      P  
Sbjct: 113 SVLQVLTYTPPLFNYIMSEYHK----QKCGTVGFCMQCELTNHFTKVFRGNTNGAIKPMS 168

Query: 271 FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGI 330
            +        +     Q+DAHEF   +++GI +K +        + + +  +A+ +F G+
Sbjct: 169 IIQKLQFIGKSFRFGRQEDAHEFLRYVVEGI-QKSDYVGKPNLDKFSKETSVANAIFGGL 227

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
            RS V C+ C F S TF+  +D +LD+                             ++C 
Sbjct: 228 YRSQVKCLKCNFDSNTFETMMDINLDV-----------------------------KDC- 257

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
            ST++  L R    +RL  D K++C++C+++  + K+ SI K P V    +KRF+ +++ 
Sbjct: 258 -STVIQALQRSVCADRLEGDNKYYCERCRMKTVAQKRNSIYKEPNVLTLQLKRFDFTNM- 315

Query: 451 KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVT 510
               K+ + + FP  LD+ P++S +        + +P               ++L+AV+ 
Sbjct: 316 -FGGKISKNVVFPEELDIRPFMSVA--------QNYPL-------------LYKLYAVLV 353

Query: 511 HTG-KLDAGHYVTYLRLSN 528
           H+G   ++GHY  Y++ SN
Sbjct: 354 HSGFSCNSGHYYCYVKASN 372


>gi|443897312|dbj|GAC74653.1| ubiquitin carboxyl-terminal hydrolase [Pseudozyma antarctica T-34]
          Length = 744

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 159/369 (43%), Gaps = 68/369 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ--SKNGVRLCLACDLDTMFSA 257
           GL+N GNTC+MNSV+QAL HTPPL    L+   +  + +   K          + +    
Sbjct: 196 GLSNYGNTCYMNSVMQALVHTPPLAFALLTQELDVLHGEWGGKPNAAFDAVTAMHSFAKR 255

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
              G R   +P +F  +    A  L    Q+DAHE+   +L+ + +        P+S   
Sbjct: 256 SLQGTRPTNAPQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCL--ARAPKSLKP 313

Query: 318 GD----CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
            D        H+ F G LRS VMC +CG  S TFDP +D SLD+                
Sbjct: 314 DDPARRTTFVHKTFGGKLRSRVMCHSCGHNSDTFDPFMDLSLDV---------------- 357

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
                           GI++L   L  F   + L   +K+ C +C+ + ++ KQ +I   
Sbjct: 358 --------------RKGINSLTDALRAFVAKDHLTGAEKYKCDKCKRKVDATKQFTIDAA 403

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
           P     H+KRF          KV R + F   L++APYLS                    
Sbjct: 404 PPALTVHLKRFT-----VFGGKVSRQIAFDDMLNIAPYLS-------------------- 438

Query: 494 NTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQ- 550
             +N   + + L+A V H G   ++GHYV  +R  S KW + DD+ + E+  +     Q 
Sbjct: 439 --VNNGPARYRLYATVHHYGSGPNSGHYVASVRSPSGKWMRMDDSHVAEMGRSGPTNDQS 496

Query: 551 GYMMFYVQK 559
            Y++FY+++
Sbjct: 497 AYILFYLRE 505


>gi|449438831|ref|XP_004137191.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
           sativus]
 gi|449524412|ref|XP_004169217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
           sativus]
          Length = 369

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 176/405 (43%), Gaps = 97/405 (23%)

Query: 192 GD-LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLS-DRHNRYYCQSKNGVRLCL 247
           GD  P G R  GL N GNTC+ NSVLQAL+   P R   L    +N+    ++  +  CL
Sbjct: 13  GDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKSIGDAEENLLTCL 72

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
           A DL T  S+      +  +P +F+    +      SY  QDAHEF   +L+ + + +EK
Sbjct: 73  A-DLFTQISSQKKKTGV-IAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEK 130

Query: 308 DQHKPRS------------------QGNGD-----CCIAHRVFSGILRSDVMCMACGFTS 344
           + H  +S                  Q NG          H+ F G+L ++  C+ C   +
Sbjct: 131 EAHAIKSDAESSSPPEKISNGPKTGQANGAQKEPLVTWVHKNFQGLLTNETRCLRCETVT 190

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
              +  +D SLD+E N                               S++  CL  F+  
Sbjct: 191 ARDETFLDLSLDIEQN-------------------------------SSITSCLKNFSST 219

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   + FPL
Sbjct: 220 ETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPL 279

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTY 523
            L +                        SNT+ +  SE+ LFAVV H G   + GHYV+ 
Sbjct: 280 ELKL------------------------SNTMEDADSEYSLFAVVVHVGSGPNHGHYVSL 315

Query: 524 LRLSNKWYKCDDAWITEVNENTVR----AAQ--------GYMMFY 556
           ++  N W   DD  +  ++E+ V+    +AQ        GY++FY
Sbjct: 316 VKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFY 360


>gi|148696217|gb|EDL28164.1| ubiquitin specific peptidase 8, isoform CRA_b [Mus musculus]
          Length = 1119

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 759  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 818

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 819  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 875

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 876  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 933

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 934  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 964

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 965  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1022

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 1023 QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1061

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1062 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1108


>gi|157820619|ref|NP_001100539.1| ubiquitin carboxyl-terminal hydrolase 36 [Rattus norvegicus]
 gi|149054934|gb|EDM06751.1| ubiquitin specific protease 36 (predicted) [Rattus norvegicus]
          Length = 1005

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHMVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCRSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ SI +   V   
Sbjct: 277 ----------QAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFSIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V + Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLSQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|148696216|gb|EDL28163.1| ubiquitin specific peptidase 8, isoform CRA_a [Mus musculus]
          Length = 1108

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 748  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 807

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 808  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 864

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 865  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 922

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 923  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 953

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 954  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 1011

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 1012 QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1050

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1051 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1097


>gi|74137217|dbj|BAE21996.1| unnamed protein product [Mus musculus]
          Length = 1080

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 720  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 779

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 780  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 836

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 837  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 894

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 895  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 925

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 926  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 983

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 984  QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1022

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1023 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1069


>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
           rubripes]
          Length = 1050

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 160/361 (44%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R   QS      C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQSG----FCMICVMQNHIIQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D ++++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQ-------------------- 277

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ ++ +   V   
Sbjct: 278 -----------AANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTV 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGD-------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|20071587|gb|AAH27052.1| Usp8 protein, partial [Mus musculus]
          Length = 673

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 182/407 (44%), Gaps = 86/407 (21%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
           +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 313 SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 372

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                 G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 373 NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 429

Query: 296 SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
            ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 430 FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 487

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
            V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 488 TVQCLTCRRRSRTFEAFMYLSLPLA--------------------------STSKC---T 518

Query: 394 LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
           L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 519 LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 576

Query: 454 RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
           +K+   + FPL +LD++ Y+                     N+L     ++ LF+V  H 
Sbjct: 577 QKLQTSVDFPLENLDLSQYVIGP-----------------KNSLK----KYNLFSVSNHY 615

Query: 513 GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 616 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 662


>gi|194764571|ref|XP_001964402.1| GF23156 [Drosophila ananassae]
 gi|190614674|gb|EDV30198.1| GF23156 [Drosophila ananassae]
          Length = 899

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 70/383 (18%)

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
           ++ RGL GL NLGNTC+MNS+LQ L +TP L  Y +SD++  Y  +S N     +  ++ 
Sbjct: 560 NVGRGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKSYISRS-NRTNGQVIEEVA 618

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            +   ++ G     +     Y   ++       +QQD+HEF   ++D +H  ++   H  
Sbjct: 619 ALIKELWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQT-LHVA 677

Query: 313 RSQGN--------------GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
           R +                 +  I H +F G ++S V C+AC   S T++   + SL+L 
Sbjct: 678 RQRETISASEKAWLEFTKAKESMILH-LFYGQIKSTVKCVACNKESATYECFSNLSLELP 736

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
           P                            N  +  L  C+D +   ER+   Q + C  C
Sbjct: 737 P----------------------------NSNVCQLNQCMDMYFSGERI---QGWNCPNC 765

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR-KVDRYLQFPL-SLDMAPYLSSSI 476
             +++++K++ I KLP V   H+KRF        +  K   YL+FPL +L+M PY++ + 
Sbjct: 766 NTKRDAIKKLDISKLPPVLVVHLKRFYADPGNTGAYIKKQNYLRFPLDNLEMTPYIARA- 824

Query: 477 LRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN--KWYKCD 534
                          ES  +   +  ++L+AV  H G ++ GHY  + + +N  +W+K D
Sbjct: 825 ---------------ESRAVTPKT--YQLYAVSNHYGTMEGGHYTAFCKSANYGRWFKFD 867

Query: 535 DAWITEVNENTVRAAQGYMMFYV 557
           D  ++ ++ + V ++  Y++FY 
Sbjct: 868 DQIVSALDTSNVVSSAAYILFYT 890


>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 36 [Ovis aries]
          Length = 1080

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 169/387 (43%), Gaps = 63/387 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P++ +S   G + R   GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q    
Sbjct: 106 PVERLSLRWGRVYRVGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGS-- 163

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +       F        P  F+    + A +     Q+DAHEF    +D + 
Sbjct: 164 --FCMLCVMQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQ 221

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +       K   Q      + H++F G LRS V C  C   S T+DP +D +L++     
Sbjct: 222 KACLSGCAKLDRQTQATTLV-HQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR---- 276

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        + ++  L+ F +P+ L  +  + C +C+ + 
Sbjct: 277 ---------------------------QAANIVRALELFVKPDVLSGENAYMCAKCKRKV 309

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ +I +   V    +KRF + S  K+++ V     +P  L++ PY+S S       
Sbjct: 310 PASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS------ 359

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITE 540
                          EP   + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +  
Sbjct: 360 --------------GEPVM-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHA 404

Query: 541 VNENTVRAAQGYMMFYVQKMLYYKASE 567
            N   V   Q Y++FY++     K+ E
Sbjct: 405 SNIKVVLNQQAYVLFYLRIPGSKKSPE 431


>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
          Length = 411

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 157/362 (43%), Gaps = 69/362 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+VLQ L +TPPL +  LS +H     Q+      C+ C L    +   
Sbjct: 81  GLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQ----QTCGKQTFCMLCALQAHMTRAL 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
           C       P   +    R  +   +++Q+DAHEF +  L G  ++    + KP    + D
Sbjct: 137 C------HPGDVIRPLPRLLAAFHTHQQEDAHEFLMFTL-GAMQQACLPEDKPSDPQSED 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G  RS + C+ C   S+T DP +D SLD+E  Q  S               
Sbjct: 190 ATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQA------------- 236

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                             L++  +PE+L  +  + C  C  +  + K +++     V   
Sbjct: 237 ------------------LEQLVKPEKLDGENAYHCNTCLGKVPASKMLTLHTPSKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  KM++ V     +P  LDM PYL           R  P            
Sbjct: 279 VLKRFSDFTGNKMAKDV----HYPEHLDMQPYLCE--------QRAGPL----------- 315

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G    +GHY  +++  N +WYK DD+ +T  +     +   Y++FY+
Sbjct: 316 --VYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALSQHAYVLFYI 373

Query: 558 QK 559
           QK
Sbjct: 374 QK 375


>gi|148696218|gb|EDL28165.1| ubiquitin specific peptidase 8, isoform CRA_c [Mus musculus]
          Length = 1080

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 720  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 779

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 780  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 836

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 837  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 894

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 895  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 925

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 926  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 983

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 984  QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1022

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1023 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1069


>gi|31981044|ref|NP_062703.2| ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Mus musculus]
 gi|44888442|sp|Q80U87.2|UBP8_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
            Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
            isopeptidase Y; Short=mUBPy; AltName: Full=Ubiquitin
            thioesterase 8; AltName:
            Full=Ubiquitin-specific-processing protease 8
 gi|29747898|gb|AAH50947.1| Ubiquitin specific peptidase 8 [Mus musculus]
 gi|38181867|gb|AAH61465.1| Ubiquitin specific peptidase 8 [Mus musculus]
 gi|42490777|gb|AAH66126.1| Ubiquitin specific peptidase 8 [Mus musculus]
          Length = 1080

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 720  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 779

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 780  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 836

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 837  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 894

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 895  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 925

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 926  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 983

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 984  QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1022

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1023 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1069


>gi|390594435|gb|EIN03846.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1186

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 162/393 (41%), Gaps = 73/393 (18%)

Query: 200  GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN-----GVRLCLACDLDTM 254
            GL N+GNTC+MNS +Q L  T P   +FL    + Y+  + N     G +  +     T+
Sbjct: 826  GLKNMGNTCYMNSTIQCLNATVPFARFFL----DGYWQHAINMVNPLGTKGAVTAGFATL 881

Query: 255  FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS 314
               I  G     +P KF   + RHA+     EQ D  EF  ++LD +HE + +   KP  
Sbjct: 882  LRDINQGAVSYLTPVKFRADFIRHANQFDGSEQHDCQEFLSTLLDSLHEDMNRILQKPTY 941

Query: 315  QGN--------------------------GDCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
            Q                             D  I    F G  R+ + C+ C  TSTT++
Sbjct: 942  QPTPERERELERLPQQIASEQEWHIYRMRNDSLIVD-FFQGQFRNRLQCLTCQNTSTTYN 1000

Query: 349  PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
              +  +L +   + S +                           TL  CLD F + E + 
Sbjct: 1001 TFMYLTLPVPTGRLSKV---------------------------TLQQCLDAFVKEEIME 1033

Query: 409  SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP----- 463
                + C  C+  + + KQ+S+ +LP +   H+KRF  SS    + K++ ++ FP     
Sbjct: 1034 KSDAWNCPHCKALRRATKQLSLSRLPPILLIHLKRF--SSKGAAADKIETFVDFPTKGLD 1091

Query: 464  LSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTY 523
            L+  M P L   +     G +    D         P  +++L+AV  H G L +GHY  +
Sbjct: 1092 LTNYMPPPLPPGVDNGIPGAQQLSLDDPRRQI---PPYKYDLYAVTNHFGSLSSGHYTAF 1148

Query: 524  LRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            +   N+W  CDD+ + + +   V     Y++FY
Sbjct: 1149 ISSRNQWLYCDDSRVVQADPKEVVGKPAYVLFY 1181


>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
          Length = 545

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 165/366 (45%), Gaps = 75/366 (20%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAI 258
           GL N GN+C++N+ LQ L HTPPL +Y LS  +++  C S  G ++C +   +       
Sbjct: 52  GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC-SPEGCKMCAMEAHVTQSLLHS 110

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQ 315
             GD M   P++ L       S    ++Q+DAHEF +  L+ +HE   +V + Q +P S+
Sbjct: 111 HSGDVM--KPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQVHR-QSEPTSE 161

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D    H +F G+ RS + C+ C  TS T+D  +D  LD+   Q  +     T+    
Sbjct: 162 ---DSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTE---- 214

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                                      + E L  +  ++C +C+ +  + K + I   P 
Sbjct: 215 ---------------------------KSEELRGENAYYCGRCRQKMPASKTLHIHSAPK 247

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    +KRF       M  K+DR + +P  LD+ PYLS             P  G     
Sbjct: 248 VLLLVLKRFS----AFMGNKLDRKVSYPEFLDLKPYLSQ------------PTGG----- 286

Query: 496 LNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ H G    +GHY +Y++  + KWYK DD  +T  +  +V     Y+
Sbjct: 287 ----PLPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYV 342

Query: 554 MFYVQK 559
           +FYVQ+
Sbjct: 343 LFYVQQ 348


>gi|357588457|ref|NP_001239509.1| ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Mus musculus]
          Length = 1091

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 731  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 790

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 791  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 847

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 848  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 905

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 906  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 936

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 937  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 994

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 995  QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1033

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1034 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1080


>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
 gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
          Length = 618

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 195/454 (42%), Gaps = 87/454 (19%)

Query: 131 YDRDFDAAVVLAHTTSIIQSSKPENLRKRRRID--YRPWSPDLRERSLMVNNASP-IDSM 187
           Y R   A  VL   T    S  PE L    R    Y  W  +  + S    + SP  D+M
Sbjct: 215 YGRKGSAPQVL---TQAPPSRVPEVLSPTYRPSGRYTLWEKNKGQASGPSRSTSPGRDTM 271

Query: 188 SSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCL 247
           +S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    + +     L
Sbjct: 272 NSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSS-AHTAL 327

Query: 248 ACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
             +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V 
Sbjct: 328 MEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 387

Query: 307 KDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTST 345
           +   +P+                          D  I   +F G L+S + C  CG+ ST
Sbjct: 388 RVAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCST 446

Query: 346 TFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPE 405
            FDP  D SL +                           + +     TLM C+  FT+ +
Sbjct: 447 VFDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKED 479

Query: 406 RLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL- 464
            L  D+K  C +C+ R+  +K+ S+++ P +   H+KRF  S +R  + K+  ++ FPL 
Sbjct: 480 VLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLR 537

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL 524
            LD+  + S                       N   + + L+AV  H+G    GHY  Y 
Sbjct: 538 DLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYC 575

Query: 525 R--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           R  ++ +W+  +D+ +T ++ + VR +  Y+ FY
Sbjct: 576 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFY 609


>gi|68483341|ref|XP_714412.1| hypothetical protein CaO19.1767 [Candida albicans SC5314]
 gi|68483432|ref|XP_714372.1| hypothetical protein CaO19.9336 [Candida albicans SC5314]
 gi|46435932|gb|EAK95304.1| hypothetical protein CaO19.9336 [Candida albicans SC5314]
 gi|46435974|gb|EAK95345.1| hypothetical protein CaO19.1767 [Candida albicans SC5314]
          Length = 613

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 171/403 (42%), Gaps = 95/403 (23%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDR---------HNRYYCQSK-NGVRL 245
           +GL+G  NLG TCFM+S+LQ L H P ++  F ++          HN++  Q   +    
Sbjct: 264 KGLKGFVNLGATCFMSSILQTLIHNPLIKYQFFNNDLHYFNCEKFHNQFINQGNIDENNA 323

Query: 246 CLACDLDTMFSAIFCGDRMP-YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH-- 302
           C+ C +D +F + +       +     L + W    +LA +E+QDAHEF+  +L+  H  
Sbjct: 324 CITCSIDNIFQSFYTSTTNEGFGMTNLLTTAWYKQKSLAGFEEQDAHEFWQFLLNEFHMD 383

Query: 303 --------------------EKVEKDQHKPR--SQGNGDCCIAHRVFSGILRSDVMCMAC 340
                               +  EK+ H     S  N   CI H  FS  L+S + C +C
Sbjct: 384 YQRIINNLNSNSNSNSNSNQDNNEKNTHSSNDDSVVNSCGCIMHSTFSFELQSCIKCDSC 443

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
              + T DP +D SL++                                  + L   L  
Sbjct: 444 DSITETVDPMIDLSLEV--------------------------------NFTNLYQSLQS 471

Query: 401 FTRPERLG-----SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKM-SR 454
           FTR E+L      +              ++K++ ++ LP +    +KRF H  +    + 
Sbjct: 472 FTRDEKLDDYNCKNCNNSNNNMSTTTTSAIKKLRLKTLPQILSIQLKRFRHDILGSFQAT 531

Query: 455 KVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
           K+  ++ FPL L++  Y                      + + +    ++LFAVV H G 
Sbjct: 532 KIQSHINFPLFLNVTEY----------------------SVIKDTDYIYQLFAVVCHQGS 569

Query: 515 LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           ++ GHY  +++ ++ WYK DD+ +T V+++ V  ++ Y+++Y+
Sbjct: 570 INTGHYTVFIKNNSNWYKFDDSVVTMVSQDVVINSEAYLLYYI 612


>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
 gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
 gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
 gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
          Length = 545

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 165/366 (45%), Gaps = 75/366 (20%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAI 258
           GL N GN+C++N+ LQ L HTPPL +Y LS  +++  C S  G ++C +   +       
Sbjct: 52  GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC-SPEGCKMCAMEAHVTQSLLHS 110

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQ 315
             GD M   P++ L       S    ++Q+DAHEF +  L+ +HE   +V + Q +P S+
Sbjct: 111 HSGDVM--KPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQVHR-QSEPTSE 161

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D    H +F G+ RS + C+ C  TS T+D  +D  LD+   Q  +     T+    
Sbjct: 162 ---DSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTE---- 214

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                                      + E L  +  ++C +C+ +  + K + I   P 
Sbjct: 215 ---------------------------KSEELRGENAYYCGRCRQKMPASKTLHIHSAPK 247

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    +KRF       M  K+DR + +P  LD+ PYLS             P  G     
Sbjct: 248 VLLLVLKRFS----AFMGNKLDRKVSYPEFLDLKPYLSQ------------PTGG----- 286

Query: 496 LNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ H G    +GHY +Y++  + KWYK DD  +T  +  +V     Y+
Sbjct: 287 ----PLPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYV 342

Query: 554 MFYVQK 559
           +FYVQ+
Sbjct: 343 LFYVQQ 348


>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
 gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
          Length = 370

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 171/409 (41%), Gaps = 105/409 (25%)

Query: 192 GD-LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN---GVRL 245
           GD  P G R  GL N GNTC+ NSVLQAL+   P R   L      YY  SKN       
Sbjct: 13  GDQFPEGERYFGLENFGNTCYCNSVLQALYFCAPFREQLL-----EYYANSKNIGDAEEN 67

Query: 246 CLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
            L C L  +F+ I    +     +P +F+    +      SY  QDAHEF   +L+ + +
Sbjct: 68  LLTC-LADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126

Query: 304 KVEKDQHKPRS------------------QGNGD-----CCIAHRVFSGILRSDVMCMAC 340
            +EK+    +S                  Q NG          H+ F GIL ++  C+ C
Sbjct: 127 ILEKEAQAVKSETETSSPPEKTANGPKHAQANGVSKEPLVTWVHKNFQGILTNETRCLQC 186

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
              +   +   D SLD+E N                               S++  CL  
Sbjct: 187 ETVTARDETFFDLSLDIEQN-------------------------------SSITSCLKN 215

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
           F+  E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   +
Sbjct: 216 FSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRV 275

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGH 519
            FPL L +                        SNT+ +   E+ LFAVV H G   + GH
Sbjct: 276 VFPLELKL------------------------SNTVEDADIEYSLFAVVVHVGSGPNHGH 311

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVR----AAQ--------GYMMFY 556
           YV+ ++  N W   DD  +  ++E+ V+    +AQ        GY++FY
Sbjct: 312 YVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 360


>gi|5058999|gb|AAD38869.1|AF057146_1 putative deubiquitinating enzyme UBPY [Mus musculus]
          Length = 1080

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 720  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 779

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 780  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 836

Query: 296  SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
             ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 837  FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 894

Query: 334  DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
             V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 895  TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 925

Query: 394  LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
            L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 926  LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 983

Query: 454  RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
            +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 984  QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 1022

Query: 513  GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1023 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1069


>gi|74218724|dbj|BAE25218.1| unnamed protein product [Mus musculus]
          Length = 988

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 86/407 (21%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
           +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 628 SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 687

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                 G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 688 NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 744

Query: 296 SMLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRS 333
            ++DG+HE + K  ++ R                       Q N    +A  +F G  +S
Sbjct: 745 FLMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKS 802

Query: 334 DVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGIST 393
            V C+ C   S TF+  +  SL L                           S+  C   T
Sbjct: 803 TVQCLTCRRRSRTFEAFMYLSLPL--------------------------ASTSKC---T 833

Query: 394 LMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS 453
           L  CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  
Sbjct: 834 LQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWK 891

Query: 454 RKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHT 512
           +K+   + FPL +LD++ Y+         G +         N+L     ++ LF+V  H 
Sbjct: 892 QKLQTSVDFPLENLDLSQYV--------IGPK---------NSLK----KYNLFSVSNHY 930

Query: 513 GKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           G LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 931 GGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 977


>gi|157817586|ref|NP_001099972.1| ubiquitin carboxyl-terminal hydrolase 8 [Rattus norvegicus]
 gi|149023197|gb|EDL80091.1| ubiquitin specific protease 8 (predicted) [Rattus norvegicus]
          Length = 1081

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 721  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 780

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 781  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 837

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 838  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 897

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 898  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 928

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 929  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 986

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G +S+       ++ LF+V  H G 
Sbjct: 987  LQTSVDFPLENLDLSQYVI----------------GPKSSL-----KKYNLFSVSNHYGG 1025

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 1026 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 1070


>gi|348558248|ref|XP_003464930.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Cavia
           porcellus]
          Length = 1102

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 159/361 (44%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATVQCLTYTPPLANYLLSREHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QATNIVRALELFVKPDVLSGENAYMCAKCRKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S             +GD        
Sbjct: 327 SLKRFANLSGGKITKDVG----YPEFLNIRPYMSQS-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
            griseus]
          Length = 1079

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 182/405 (44%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 719  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 778

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 779  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 835

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 836  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 895

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 896  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 926

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 927  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 984

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G +S+       ++ LF+V  H G 
Sbjct: 985  LQTSVDFPLENLDLSQYVI----------------GPKSSL-----KKYNLFSVSNHYGG 1023

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1024 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1068


>gi|327264744|ref|XP_003217171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Anolis
           carolinensis]
          Length = 1114

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 165/378 (43%), Gaps = 63/378 (16%)

Query: 183 PIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG 242
           P++ +S     + R   GL+NLGNTCF+NS LQ L +TPPL NY LS  H+R   Q    
Sbjct: 104 PVERLSLKWERVYRVGAGLHNLGNTCFLNSTLQCLTYTPPLANYLLSKEHSRSCHQGG-- 161

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
              C+ C +       F        P  F+    + A +     Q+DAHEF    +D + 
Sbjct: 162 --FCMMCIMQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQ 219

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           +       K   Q      + H++F G LRS V C  C   S T+DP +D +L++     
Sbjct: 220 KACLNGYTKLDRQTQA-TTLVHQIFGGYLRSRVKCSMCKSVSDTYDPFLDVALEIR---- 274

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        + ++  L+ F + + L  +  + C +C+ + 
Sbjct: 275 ---------------------------QAANIVRALELFVKADVLSGENAYMCAKCKKKV 307

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
            + K+ +I +   V    +KRF + S  K+++ V     +P  L++ PY+S S       
Sbjct: 308 PASKRFTIHRASNVLTISLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS------- 356

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITE 540
                  GD           + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +  
Sbjct: 357 ------SGDP--------VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHS 402

Query: 541 VNENTVRAAQGYMMFYVQ 558
            N   V   Q Y++FY++
Sbjct: 403 SNIKVVLNQQAYVLFYLR 420


>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
          Length = 540

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 175/401 (43%), Gaps = 76/401 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 51  PDAPELHQDEAQVVEELTTNGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 110

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L       S   
Sbjct: 111 DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHSHSGDVM--KPSQIL------TSAFH 161

Query: 284 SYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC 340
            ++Q+DAHEF +  L+ +HE   +V + Q  P  Q   D    H +F G  RS + C+ C
Sbjct: 162 KHQQEDAHEFLMFTLETMHESCLQVHR-QSDPTPQ---DTSPIHDIFGGWWRSQIKCLHC 217

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
             TS TFDP +D  LD+   Q  +     T                              
Sbjct: 218 QGTSHTFDPFLDVPLDISSAQSVNQALWDTG----------------------------- 248

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
             + E L  +  ++C +C+ +  + K + +   P V    +KRF   +  K+ RKV    
Sbjct: 249 --KSEELLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVS--- 303

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGH 519
            +P  LD+ PYLS             P  G            + L+AV+ H G   ++GH
Sbjct: 304 -YPEFLDLKPYLSE------------PTGG---------PLPYALYAVLVHDGATSNSGH 341

Query: 520 YVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           Y   ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 342 YFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 382


>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
          Length = 1075

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 182/405 (44%), Gaps = 82/405 (20%)

Query: 180  NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRY 235
            +AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR 
Sbjct: 715  SASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS 774

Query: 236  YCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFI 295
                  G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  +
Sbjct: 775  NLLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLL 831

Query: 296  SMLDGIHEKVEK-DQHKPRSQGNGD-------------------CCIAHRVFSGILRSDV 335
             ++DG+HE + K D  K   + N D                     I   +F G  +S V
Sbjct: 832  FLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTV 891

Query: 336  MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
             C+ C   S TF+  +  SL L                           S+  C   TL 
Sbjct: 892  QCLTCHKKSRTFEAFMYLSLPL--------------------------ASTSKC---TLQ 922

Query: 396  GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K
Sbjct: 923  DCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQK 980

Query: 456  VDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK 514
            +   + FPL +LD++ Y+                 G +S+       ++ LF+V  H G 
Sbjct: 981  LQTSVDFPLENLDLSQYVI----------------GPKSSL-----KKYNLFSVSNHYGG 1019

Query: 515  LDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y +     +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 1020 LDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 1064


>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
 gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
 gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
          Length = 1325

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C + T  +   
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQTHITQAL 166

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 167 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 226

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 227 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 267

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 268 -------------SVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTI 314

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 315 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 346

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V   Q Y++
Sbjct: 347 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVL 406

Query: 555 FYVQ 558
           FY++
Sbjct: 407 FYIR 410


>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
           Short=USP17; AltName: Full=Deubiquitinating enzyme
           17-like protein 2; AltName: Full=Deubiquitinating
           protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
           protein 6; AltName: Full=Ubiquitin carboxyl-terminal
           hydrolase 17-like protein 2; AltName: Full=Ubiquitin
           thioesterase 17-like protein 2; AltName:
           Full=Ubiquitin-specific-processing protease 17-like
           protein 2
          Length = 540

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 175/401 (43%), Gaps = 76/401 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V      +   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 51  PDAPELHQDEAQVVEELTTNGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 110

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P++ L       S   
Sbjct: 111 DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHSHSGDVM--KPSQIL------TSAFH 161

Query: 284 SYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC 340
            ++Q+DAHEF +  L+ +HE   +V + Q  P  Q   D    H +F G  RS + C+ C
Sbjct: 162 KHQQEDAHEFLMFTLETMHESCLQVHR-QSDPTPQ---DTSPIHDIFGGWWRSQIKCLHC 217

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
             TS TFDP +D  LD+   Q  +     T                              
Sbjct: 218 QGTSHTFDPFLDVPLDISSAQSVNQALWDTG----------------------------- 248

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
             + E L  +  ++C +C+ +  + K + +   P V    +KRF   +  K+ RKV    
Sbjct: 249 --KSEELLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVS--- 303

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGH 519
            +P  LD+ PYLS             P  G            + L+AV+ H G   ++GH
Sbjct: 304 -YPEFLDLKPYLSE------------PTGG---------PLPYALYAVLVHDGATSNSGH 341

Query: 520 YVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           Y   ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 342 YFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 382


>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
           [Rhipicephalus pulchellus]
          Length = 1076

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 71/368 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTCFMN+V+Q L + PPL NY L   H   +C     +  C+ C+L        
Sbjct: 169 GLVNMGNTCFMNTVIQCLTYCPPLANYLL---HQDDHCTKCKTLNFCMMCELQRHMKRAL 225

Query: 260 --CGDRMPYSPAKFLYSWWRH---ASNLASYEQQDAHEFFISMLDGIHEK--VEKDQHKP 312
              GD +     K +Y + R    A +    +Q+DAHEF   ++D + +      D    
Sbjct: 226 EKSGDSI-----KPVYIYQRLKAIAKHFQFGQQEDAHEFLRYVIDNLWKAALANYDGGVK 280

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
               + +  + + +F G  RS V CM C   S T+D  +D  LD++              
Sbjct: 281 LDPASKETTVVNEIFGGYHRSQVTCMKCKEKSNTYDHFMDLILDIK-------------- 326

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
                              S+L   L++F  PE L +D  + C +C ++  + K+ ++ +
Sbjct: 327 -----------------NASSLETALEKFVEPELLQNDNAYKCPRCNIKVMAQKRFTVHR 369

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
            P V+ F +KRF+  + R    K+ +++ +P  L++ PY+S                GD 
Sbjct: 370 APNVATFQLKRFD--ANRMFGGKITKHVSYPEHLELRPYMSDK-------------HGDP 414

Query: 493 SNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQ 550
                     + L AV+ H G   ++GHY  Y+R SN  WY  DD+ + +V+   V   Q
Sbjct: 415 VT--------YRLNAVLVHLGASCNSGHYFCYVRNSNGSWYCMDDSRVHQVSMGQVLNQQ 466

Query: 551 GYMMFYVQ 558
            Y++FYV+
Sbjct: 467 AYVLFYVR 474


>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
          Length = 493

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 162/378 (42%), Gaps = 74/378 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY--------YCQSKNGVRLCLACDL 251
           GL N  NTCF+N+VL  L +T PL  Y L+D H +          C     V  C     
Sbjct: 78  GLVNAFNTCFLNAVLCCLTYTAPLTQYLLTDNHKKNCTIHGFCGLCAMSEHVNKCFTTAK 137

Query: 252 DTM-FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
             M FSAI        SP  F  +  + +SNL    Q+DAHEFF+ +LD   +       
Sbjct: 138 SLMRFSAI--------SPNYFTSNLKKISSNLLLGRQEDAHEFFMFLLDAFTKSYTPLNS 189

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
           K   Q   D  + H +F G L+S V C  C   S ++D  +D S+ +             
Sbjct: 190 KLTPQ-EEDAGLVHTIFGGKLQSQVTCNNCKANSNSYDRFLDLSVQI------------- 235

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
                     +G  S QN         L RF   + +     + C  C+ +  + KQM+ 
Sbjct: 236 ----------NGEKSIQN--------ALSRFIEADTIDG---YNCDACKQKVRAYKQMTA 274

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
            ++P     H+KRFE+       RK+ + ++FP +LDMAPY+S                 
Sbjct: 275 NEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETLDMAPYISKE--------------- 319

Query: 491 DESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLR-LSNKWYKCDDAWITEVNENTVRA 548
                    ++E++L+AV+ H G   DAGHY  Y++     W   +D  +  V+ N V +
Sbjct: 320 -----KKVQAAEYKLYAVLVHAGSSCDAGHYFAYVKNPQGGWLLINDETVHPVSINEVLS 374

Query: 549 AQGYMMFYVQKMLYYKAS 566
            + YM+FY Q     K+S
Sbjct: 375 QRAYMLFYEQSSFITKSS 392


>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
           [Ornithorhynchus anatinus]
          Length = 989

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 164/370 (44%), Gaps = 63/370 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H+R  C        C+ C +       F
Sbjct: 125 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHSR-SCAPGG---FCMLCVMQNHMIQTF 180

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +K   + H    +    
Sbjct: 181 ANSGNAIKPFSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAM-QKACLNGHAKLDRQTQA 239

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 240 TTLVHQIFGGYLRSRVKCSLCKSVSDTYDPYLDVALEIR--------------------- 278

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ SI +   V   
Sbjct: 279 ----------QTANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFSIHRASNVLTL 328

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF +    K+++ V     +P  L++ PY+S S              GD        
Sbjct: 329 SLKRFANFCGGKITKDVG----YPEFLNIRPYMSQS-------------SGD-------- 363

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 364 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHSSNIKVVLNQQAYVLFYL 423

Query: 558 QKMLYYKASE 567
           +   + K+ E
Sbjct: 424 RIPGFKKSPE 433


>gi|157131752|ref|XP_001662320.1| ubiquitin specific protease [Aedes aegypti]
 gi|108871397|gb|EAT35622.1| AAEL012219-PA [Aedes aegypti]
          Length = 648

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 66/384 (17%)

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
           G + RGL GL NLGNTC+MNS+LQ L +T  L  YFL ++  +   ++ N  +  +A ++
Sbjct: 301 GSVGRGLTGLKNLGNTCYMNSILQCLSNTTFLNEYFLEEQFKQNLNRN-NKTQGRIAEEV 359

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK-----VE 306
             +  A++ G     +     +   ++       EQQD+HE    ++D +H       +E
Sbjct: 360 AAVIKALWTGQYKCIASKNLRFVVGQYERQFGGIEQQDSHELLTILMDWLHSDLQTVPIE 419

Query: 307 KD---QHKPRSQG------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
            D   ++ P S+        G      ++  G ++S V C+ CG  S T++     SLDL
Sbjct: 420 IDTSLENLPASERAWVEYFKGKESYVAQLSYGQIKSMVKCVRCGKESATYESFSSLSLDL 479

Query: 358 EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQ 417
             +                         +  C +S    CLD +   ER+     + C Q
Sbjct: 480 PSD-------------------------ANRCDLS---DCLDMYFNGERIMG---WNCPQ 508

Query: 418 CQVRQESLKQMSIRKLPLVSCFHIKRF--EHSSVRKMSRKVDRYLQFPLS-LDMAPYLSS 474
           C+  Q ++K++ I +LP +   H KRF  +  ++  + +K   Y++FPL+ LDM+P+++ 
Sbjct: 509 CKSSQVAIKKLDISRLPSILVIHFKRFYADPEALSTVYKKKQNYVKFPLTDLDMSPHVAP 568

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYK 532
           S               +++      S  + L+ V  H G +++GHY  + R  L NKWYK
Sbjct: 569 S---------------EKTRNHKLKSRRYHLYGVSNHYGSMESGHYTAFCRNKLHNKWYK 613

Query: 533 CDDAWITEVNENTVRAAQGYMMFY 556
            DD  ++ ++++ V ++  Y++FY
Sbjct: 614 YDDHTVSSLDKSDVCSSAAYILFY 637


>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
          Length = 369

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 173/409 (42%), Gaps = 105/409 (25%)

Query: 192 GD-LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN---GVRL 245
           GD  P G R  GL N GNTC+ NSVLQAL+   P R   L      YY  +KN       
Sbjct: 13  GDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLL-----EYYTNNKNLADAEEN 67

Query: 246 CLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
            L C L  +F  I    +     +P +F+    +      SY  QDAHEF   +L+ + +
Sbjct: 68  LLTC-LADLFMQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126

Query: 304 KVEKDQHKPRS------------------QGNGD-----CCIAHRVFSGILRSDVMCMAC 340
            +EK+    +S                  Q NG          H+ F GIL ++  C+ C
Sbjct: 127 ILEKEASASKSDPETSSPPEKTANGPKTAQANGVQKEPLVTWVHKNFQGILTNETRCLRC 186

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
              +   +  +D SLD+E N                               S++  CL  
Sbjct: 187 ETVTARDETFLDLSLDIEQN-------------------------------SSITSCLKN 215

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
           F+  E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   +
Sbjct: 216 FSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRV 275

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGH 519
            FPL L +                        SNT+ +  SE+ LFAVV H G   + GH
Sbjct: 276 VFPLELKL------------------------SNTVEDADSEYSLFAVVVHVGSGPNHGH 311

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVR----AAQ--------GYMMFY 556
           YV+ ++  N W   DD  +  ++E++V+    +AQ        GY++FY
Sbjct: 312 YVSLVKSHNHWLFFDDENVEMIDESSVQTFFGSAQEYSSNTDHGYILFY 360


>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
          Length = 743

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 73/366 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK--PRSQGN 317
                   P   +    R A +     Q+DAHEF    +D + +      +K    +Q  
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 227

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
              C   ++F G LRS V C+ C   S TFDP +D +L+++  Q                
Sbjct: 228 TLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ---------------- 268

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                          ++   L++F +PE+L  +  + C +C+    + K+ +I +   V 
Sbjct: 269 ---------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVL 313

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF + +  K+++ V    ++P  LD+ PY+S                        
Sbjct: 314 TLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------ 345

Query: 498 EPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGY 552
           +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + Q Y
Sbjct: 346 QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAY 405

Query: 553 MMFYVQ 558
           ++FY++
Sbjct: 406 VLFYIR 411


>gi|62027426|gb|AAH92078.1| Usp8 protein, partial [Mus musculus]
          Length = 419

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 182/406 (44%), Gaps = 86/406 (21%)

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRYY 236
           AS I +++   G     L GL NLGNTC+MNS+LQ L + P L +YF      D  NR  
Sbjct: 60  ASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN 119

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
                G    +A +   +  A++ G     SP  F  +  +     A   QQD+ E  + 
Sbjct: 120 LLGHKGE---VAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLF 176

Query: 297 MLDGIHEKVEKDQHKPR----------------------SQGNGDCCIAHRVFSGILRSD 334
           ++DG+HE + K  ++ R                       Q N    +A  +F G  +S 
Sbjct: 177 LMDGLHEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA--LFQGQFKST 234

Query: 335 VMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTL 394
           V C+ C   S TF+  +  SL L                           S+  C   TL
Sbjct: 235 VQCLTCRRRSRTFEAFMYLSLPLA--------------------------STSKC---TL 265

Query: 395 MGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR 454
             CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +
Sbjct: 266 QDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQ 323

Query: 455 KVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG 513
           K+   + FPL +LD++ Y+                     N+L     ++ LF+V  H G
Sbjct: 324 KLQTSVDFPLENLDLSQYVIGP-----------------KNSL----KKYNLFSVSNHYG 362

Query: 514 KLDAGHYVTYLRLS--NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
            LD GHY  Y + +   +W+K DD  +++++ ++VR++  Y++FY 
Sbjct: 363 GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYT 408


>gi|116686116|ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
 gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
 gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase 42 [Mus musculus]
 gi|187953717|gb|AAI37853.1| Ubiquitin specific peptidase 42 [Mus musculus]
          Length = 1324

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 163/364 (44%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C + T  +   
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQTHITQAL 166

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 167 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 226

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 227 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 267

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 268 -------------SVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTI 314

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 315 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 346

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +   V   Q Y++
Sbjct: 347 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVL 406

Query: 555 FYVQ 558
           FY++
Sbjct: 407 FYIR 410


>gi|348572084|ref|XP_003471824.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Cavia porcellus]
          Length = 378

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 168/387 (43%), Gaps = 70/387 (18%)

Query: 195 PRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTM 254
           P G+ GL NLGNTC+MN+VLQ L   PPL  YF   R  +Y    +   R  +A     +
Sbjct: 46  PPGVAGLRNLGNTCYMNAVLQCLASVPPLAQYF---RSGQYVTALRKDCRE-VATAFAYL 101

Query: 255 FSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK-DQHKPR 313
            + ++ GD    SP +F  +  R   +     QQDA EF I +L+ +HE + K  Q    
Sbjct: 102 LTDMWLGDADCVSPEEFRAALGRLHPDFTKRTQQDAQEFLIYVLNALHEALRKYHQRSGE 161

Query: 314 SQGNGDCC---------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            +    CC         I  ++F G L   +MC+ C   S               N+  +
Sbjct: 162 KRSTQRCCSRGIASETSIITQLFEGQLNYSIMCLKCENCSYR-------------NEVFT 208

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
           + +    S + C                TL  CL  F + + L  + +  C  C+ +QE+
Sbjct: 209 VLSLPIPSEYEC----------------TLQDCLQCFFQQDTLTWNNQIHCSFCETKQET 252

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGN 483
             + SI K P    FH+KRF+     ++ RK+   + +PL+ LD+ PY+     +     
Sbjct: 253 AVRASISKPPKTIIFHLKRFDIQG--QVKRKLRTDIHYPLTNLDLTPYICPVFRK----- 305

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEV 541
                             ++ L AVV H G LD GHY    R  ++  WY  DD  ++E+
Sbjct: 306 ----------------HPKYNLCAVVNHFGDLDGGHYTASCRNSVTQAWYSFDDTRVSEI 349

Query: 542 NENTVRAAQGYMMFYVQKMLYYKASEK 568
               V+ +  Y++FY  +  + KA++K
Sbjct: 350 PAPLVQTSMAYLLFYSWQP-FSKATQK 375


>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
           africana]
          Length = 1431

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQHTVDAMQKACLNGSNKLDRHTQAT 227

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 228 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 268

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 269 -------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTL 315

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 316 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 347

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + Q Y++
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407

Query: 555 FYVQ 558
           FY++
Sbjct: 408 FYIR 411


>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
 gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
          Length = 396

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 173/393 (44%), Gaps = 78/393 (19%)

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           + N    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    + +     L 
Sbjct: 48  AKNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSA-HTALM 106

Query: 249 CDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
            +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V +
Sbjct: 107 EEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNR 166

Query: 308 DQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTT 346
              +P+                          D  I   +F G L+S + C  CG+ ST 
Sbjct: 167 VAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCSTV 225

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
           FDP  D SL +                           + +     TLM C+  FT+ + 
Sbjct: 226 FDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKEDV 258

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-S 465
           L  D+K  C +C+ R+  +K+ S+++ P +   H+KRF  S +R  + K+  ++ FPL  
Sbjct: 259 LDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLRD 316

Query: 466 LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
           LD+  + S                       N   + + L+AV  H+G    GHY  Y R
Sbjct: 317 LDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYCR 354

Query: 526 --LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             ++ +W+  +D+ +T ++ + VR +  Y++FY
Sbjct: 355 SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387


>gi|37360390|dbj|BAC98173.1| mKIAA1453 protein [Mus musculus]
          Length = 974

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 160 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGG----FCMLCLMQNHMVQAF 215

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 216 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 275

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 276 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 313

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 314 ----------QAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 363

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 364 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDPVM----- 401

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 402 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 458

Query: 558 Q 558
           +
Sbjct: 459 R 459


>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
           terrestris]
          Length = 541

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 219/554 (39%), Gaps = 109/554 (19%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS-HEIAVDVDRAELFCC 124
           C VCG       + C+ C A+ C       +VA HA +     + H + +D +   +FC 
Sbjct: 29  CAVCGTEK--STWLCLYCGAIHC-----GRYVAGHALQHHEENNQHCVCIDCENLAVFCY 81

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK-----------RRRIDYRPWSPDLRE 173
            C + V +      +    + +  +    EN              RR       +  L +
Sbjct: 82  MCDEYVINDTTSGQIEKIRSVTFRKDEHKENEENWNTSPSTTPSSRRENSDDNDADALWK 141

Query: 174 RSLMVNNASP------IDSMSSSNGD-------------LPRGLRGLNNLGNTCFMNSVL 214
             ++V N  P      + S+  ++GD               + + GL NLGNTCFMN VL
Sbjct: 142 AEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKITKEKKVVGLRNLGNTCFMNVVL 201

Query: 215 QAL--------------------FHTPPL-RNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           Q+                     F  PP  R   ++    + +          LA +L  
Sbjct: 202 QSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMSDA-----LLAEELRK 256

Query: 254 MFSAIFCG--DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV----EK 307
           +   +  G  +    SP       W+       Y+QQDAHEF   MLD +H ++     +
Sbjct: 257 VLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPR 316

Query: 308 DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
             H+P     G   I   VF G L S V CM C   S T +P  D SLD+ P++   ++ 
Sbjct: 317 LGHEPLGL-RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI-PDR---LQR 371

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            + +    C                +L   L RF + E L   + +FC  C  +Q S K+
Sbjct: 372 RTKEQEEVC----------------SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKR 415

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFF 486
             I +LP V C HIKRF   +  +   KVD  + FP+ SLDM+ +    +  ++ G    
Sbjct: 416 FWIHRLPNVLCLHIKRFRWCNSYR--SKVDTQVDFPMKSLDMSAFTVRGVSGTKLG---- 469

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENT 545
                 SN     S  ++L AV+ H G     GHY  +     +W+  +D+ +     + 
Sbjct: 470 -----ASN-----SHLYDLAAVIVHHGSGAGTGHYTAFAVHDGQWFHFNDSSVRPATTDA 519

Query: 546 VRAAQGYMMFYVQK 559
           V   + Y++FYV+K
Sbjct: 520 VAKCKPYILFYVRK 533


>gi|71022651|ref|XP_761555.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
 gi|46101424|gb|EAK86657.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
          Length = 1198

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 168/392 (42%), Gaps = 62/392 (15%)

Query: 197  GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN-GVRLCLACDLDTMF 255
            GL GL NLGN+C+MNS LQ L  T PL  + L   +     ++   G +  LA  L  + 
Sbjct: 840  GLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKTAINRTNPLGTQGQLATALAGLV 899

Query: 256  SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS- 314
              ++       SP  F  +  R A +   Y+Q D+ EF   +LDG+HE +     +P + 
Sbjct: 900  HVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVTTRPAAI 959

Query: 315  -----QGNGDCCIAHRV--------------------FSGILRSDVMCMACGFTSTTFDP 349
                 + N    +  ++                    F G  R+ + C+ CG TSTT++ 
Sbjct: 960  EMTPARENELETLPQQIASIKEWGIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTTYEA 1019

Query: 350  CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
                SL +   +G                           G   L  CLD F R E L  
Sbjct: 1020 FTYLSLPVPSGRG--------------------------VGKVALQQCLDAFVREEVLDK 1053

Query: 410  DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL--SLD 467
               + C +C+  +++ K++SI +LP V   H+KRF        + K+D  + FP+  +LD
Sbjct: 1054 GDMWNCSRCKRPRKATKRLSISRLPRVLLIHLKRFSFKG--PFTDKIDTTVTFPVNTALD 1111

Query: 468  MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS 527
            +  Y+   +               + +   +P   ++L+A   H G L+ GHY   ++ +
Sbjct: 1112 LTNYMPPPLPPGAAAAAGV-----KESLSQQPPYLYDLYAATHHFGSLNTGHYTATVKSA 1166

Query: 528  NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            N W+ CDD+ IT+ + + +     Y++++ +K
Sbjct: 1167 NDWWYCDDSRITKGDTSHLADNSAYVLWFRRK 1198


>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
           mellifera]
          Length = 541

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 217/554 (39%), Gaps = 109/554 (19%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKT-SSACSHEIAVDVDRAELFCC 124
           C VCG       + C+ C A+ C       +VA HA +       H + +D +   +FC 
Sbjct: 29  CAVCGTEK--STWLCLYCGAIHC-----GRYVAGHALQHHEENTQHCVCIDCENLAVFCY 81

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK-----------RRRIDYRPWSPDLRE 173
            C + V +      +      +  +    EN              RR       +  L +
Sbjct: 82  MCDEYVINDTTSGQIEKIRRATFRKDEHKENEENWNTSPSTTPSSRRENSEDNDADALWK 141

Query: 174 RSLMVNNASP------IDSMSSSNGD-------------LPRGLRGLNNLGNTCFMNSVL 214
             ++V N  P      + S+  ++GD               + + GL NLGNTCFMN VL
Sbjct: 142 AEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKITKEKKVVGLRNLGNTCFMNVVL 201

Query: 215 QAL--------------------FHTPPL-RNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           Q+                     F  PP  R   ++    + +          LA +L  
Sbjct: 202 QSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMSDA-----LLAEELRK 256

Query: 254 MFSAIFCG--DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV----EK 307
           +   +  G  +    SP       W+       Y+QQDAHEF   MLD +H ++     +
Sbjct: 257 VLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPR 316

Query: 308 DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
             H+P     G   I   VF G L S V CM C   S T +P  D SLD+ P++   ++ 
Sbjct: 317 LGHEPLGL-RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI-PDR---LQR 371

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            + +    C                +L   L RF + E L   + +FC  C  +Q S K+
Sbjct: 372 RTKEQEEVC----------------SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKR 415

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFF 486
             I +LP V C HIKRF   +  +   KVD  + FP+ SLDM+ +    +  ++ G    
Sbjct: 416 FWIHRLPNVLCLHIKRFRWCNSYR--SKVDTQVDFPMKSLDMSAFTVRGVNGTKLG---- 469

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENT 545
                 SN     S  ++L AV+ H G     GHY  +     +W+  +D+ +     + 
Sbjct: 470 -----ASN-----SHLYDLAAVIVHHGSGAGTGHYTAFAVHDGQWFHFNDSSVRPATTDA 519

Query: 546 VRAAQGYMMFYVQK 559
           V   + Y++FYV+K
Sbjct: 520 VAKCKPYILFYVRK 533


>gi|198455403|ref|XP_001359977.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198133229|gb|EAL29129.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 901

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 68/379 (17%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           RGL GL NLGNTC+MNS+LQ L +TP L  Y LSD++  Y  +S N     +  ++  + 
Sbjct: 560 RGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCLSDKYKNYISRS-NKTNGQVIEEVAALI 618

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK-DQHKPRS 314
             ++ G     +         ++ +     +QQD+HEF   ++D +H  ++  D  + R 
Sbjct: 619 KELWNGQYKCVASRDLRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTLDVSRMRE 678

Query: 315 QGNG------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
                           +  I H +F G ++S V C+ C   S T++   + SL+L PN  
Sbjct: 679 TIGAAEQAWLDFTKAKESIILH-LFYGQMKSTVKCVTCNKESATYECFSNLSLELPPNAN 737

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                          C+              L  C+D +   ER+   Q + C  C+ ++
Sbjct: 738 E--------------CQ--------------LNQCMDMYFSGERI---QGWNCPNCKTKR 766

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS-RKVDRYLQFPL-SLDMAPYLSSSILRSR 480
            ++K++ I KLP V   H+KRF   +    S  K   +L FPL +L+M+PY++ +  R+ 
Sbjct: 767 AAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLEMSPYIARAESRAA 826

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN--KWYKCDDAWI 538
                            +P + ++L+AV  H G ++ GHY  + +  N  +WYK DD  +
Sbjct: 827 -----------------KPKT-YQLYAVSNHYGTMEGGHYTAFCKSPNYGRWYKFDDQVV 868

Query: 539 TEVNENTVRAAQGYMMFYV 557
           + ++ + V ++  Y++FY 
Sbjct: 869 STLDTSNVISSAAYILFYT 887


>gi|195157880|ref|XP_002019822.1| GL12603 [Drosophila persimilis]
 gi|194116413|gb|EDW38456.1| GL12603 [Drosophila persimilis]
          Length = 901

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 68/379 (17%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           RGL GL NLGNTC+MNS+LQ L +TP L  Y LSD++  Y  +S N     +  ++  + 
Sbjct: 560 RGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCLSDKYKNYISRS-NKTNGQVIEEVAALI 618

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK-DQHKPRS 314
             ++ G     +         ++ +     +QQD+HEF   ++D +H  ++  D  + R 
Sbjct: 619 KELWNGQYKCVASRDLRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTLDVSRMRE 678

Query: 315 QGNG------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
                           +  I H +F G ++S V C+ C   S T++   + SL+L PN  
Sbjct: 679 TIGAAEQAWLDFTKAKESIILH-LFYGQMKSTVKCVTCNKESATYECFSNLSLELPPNAN 737

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                          C+              L  C+D +   ER+   Q + C  C+ ++
Sbjct: 738 E--------------CQ--------------LNQCMDMYFSGERI---QGWNCPNCKTKR 766

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMS-RKVDRYLQFPL-SLDMAPYLSSSILRSR 480
            ++K++ I KLP V   H+KRF   +    S  K   +L FPL +L+M+PY++ +  R+ 
Sbjct: 767 AAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLEMSPYIARAESRAA 826

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN--KWYKCDDAWI 538
                            +P + ++L+AV  H G ++ GHY  + +  N  +WYK DD  +
Sbjct: 827 -----------------KPKT-YQLYAVSNHYGTMEGGHYTAFCKSPNYGRWYKFDDQVV 868

Query: 539 TEVNENTVRAAQGYMMFYV 557
           + ++ + V ++  Y++FY 
Sbjct: 869 STLDTSNVISSAAYILFYT 887


>gi|410961319|ref|XP_003987231.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
           carboxyl-terminal hydrolase 50-like [Felis catus]
          Length = 381

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 176/390 (45%), Gaps = 70/390 (17%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
           ++SP+  +   N    +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     + 
Sbjct: 26  DSSPVKEVEE-NQPHSQGVTGLRNLGNTCYMNAILQCLCSISPLAEYFLSGKYITALQKD 84

Query: 240 KNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLD 299
            + V    A     + + ++ GD    SP  F  ++           QQDA EF I +L+
Sbjct: 85  CSEVATAFA----YVMTDMWLGDSECVSPEIFRSAFGNLYPAFMKKTQQDAQEFLIYVLN 140

Query: 300 GIHEKVEKDQHKPRSQGN-GDCC---------IAHRVFSGILRSDVMCMACGFTSTTFDP 349
            +HE ++K   K   +G+   CC         I  ++F G L   +MC+ C   + T+  
Sbjct: 141 ELHESLKKCHRKSYEKGSIPRCCRKTIANEVSIITQLFEGQLNYSIMCLKC--ENCTYK- 197

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
                     N+  ++      S++ C                +L  CL  F + + L  
Sbjct: 198 ----------NEVFTILCLPIPSDYEC----------------SLQDCLQCFFQQDTLTW 231

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDM 468
             +  C  C+ +QE+  + SI K P V  FH+KRF+   +  M RK+   + +PL+ LD+
Sbjct: 232 HNQIHCSFCETKQETAVRASISKAPKVIIFHLKRFD--ILGTMKRKLRTDIHYPLTNLDL 289

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--L 526
           +PY+   + R                       ++ L AVV H G LD GHY  + +  +
Sbjct: 290 SPYI-CPVFRKH--------------------PKYNLCAVVNHFGDLDGGHYTAFCKNSV 328

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           +  WY  DD  ++E+ + +V+ A  Y++FY
Sbjct: 329 TQAWYSFDDTRVSEIPDTSVQTATAYLLFY 358


>gi|431908709|gb|ELK12301.1| Ubiquitin carboxyl-terminal hydrolase 36 [Pteropus alecto]
          Length = 1007

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL  Y LS  H+R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLAGYLLSKEHSRSCRQGS----FCMLCLMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCRSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S                      EP
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQSS--------------------GEP 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 VM-YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVNSSNIKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
           caballus]
          Length = 535

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 159/362 (43%), Gaps = 70/362 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC++N+ LQ L +TPPL +Y LS +H++  CQ++   R C  C +    +   
Sbjct: 82  GLQNMGNTCYVNAALQCLTYTPPLASYMLSQQHSK-TCQNQ---RFCTLCAMQVHIT--- 134

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  Y P   +       +      Q+DAHEF +  LD + +    +  +    G+ D
Sbjct: 135 ---RALYHPGDVIQPLPELVTGFHRRRQEDAHEFLMFTLDAMQQACLSEYKQ--VDGHSD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G  RS + C+ C   S TFDP +D +LD+             K+  S N  
Sbjct: 190 NTLVRQIFGGYWRSQIQCLHCHGVSDTFDPYLDVTLDI-------------KAALSVN-- 234

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                             L++  +PE+L  +  + C  C  +  + K +++     V   
Sbjct: 235 ----------------QALEQLVKPEKLDGENSYHCSMCLKKVPASKTLTLHTSSKVLML 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  KM + V    Q+P  LDM  Y+S                       N  
Sbjct: 279 LLKRFSNFTGSKMPKDV----QYPEYLDMQQYMSQQ---------------------NSG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY  Y++  N +WYK DDA +T  +  +  +   Y++FY+
Sbjct: 314 PLLYVLYAVLVHAGWSCHNGHYFCYIKAGNGQWYKMDDAKVTACDVTSALSQCAYVLFYI 373

Query: 558 QK 559
           QK
Sbjct: 374 QK 375


>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
           caballus]
          Length = 1393

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 227

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 228 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 268

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 269 -------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTL 315

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 316 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 347

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + Q Y++
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407

Query: 555 FYVQ 558
           FY++
Sbjct: 408 FYIR 411


>gi|354467793|ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
           [Cricetulus griseus]
          Length = 1285

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C + T  +   
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCIMQTHITQAL 166

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 167 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 226

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 227 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 267

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 268 -------------SVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTI 314

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 315 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 346

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V   Q Y++
Sbjct: 347 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVL 406

Query: 555 FYVQ 558
           FY++
Sbjct: 407 FYIR 410


>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
           max]
          Length = 369

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 170/409 (41%), Gaps = 105/409 (25%)

Query: 192 GD-LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK---NGVRL 245
           GD  P G R  GL N GNTC+ NSVLQAL+   P R   L      YY  +K   +G   
Sbjct: 13  GDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLL-----EYYGNNKSILDGEEN 67

Query: 246 CLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
            L C L  +FS I    +     +P +F+    +      SY  QDAHEF   +L+ + +
Sbjct: 68  LLTC-LADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126

Query: 304 KVEKDQHKPRS------------------QGNGD-----CCIAHRVFSGILRSDVMCMAC 340
            +EK+    ++                  Q NG          H+ F GIL ++  C+ C
Sbjct: 127 ILEKEAQAAKTDQETSPPSEKAVNGPKNGQANGVHKEPLVTWVHKNFQGILTNETRCLQC 186

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
              +   +  +D SLD+E N                               S++  CL  
Sbjct: 187 ETVTARDETFLDLSLDIEQN-------------------------------SSITSCLKN 215

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
           F+  E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   +
Sbjct: 216 FSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRV 275

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGH 519
            FPL L +                        SNT+ +   E+ LFAVV H G   + GH
Sbjct: 276 VFPLELKL------------------------SNTVEDADIEYSLFAVVVHVGSGPNHGH 311

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMFY 556
           YV+ ++  N W   DD  +  ++E+ V+               GY++FY
Sbjct: 312 YVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 360


>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
 gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
           Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
           thioesterase DUB-1; AltName:
           Full=Ubiquitin-specific-processing protease DUB-1
 gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
 gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
          Length = 526

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 174/401 (43%), Gaps = 76/401 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V     ++   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 17  PDAPELHQDEAQVVEELTVNGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLCLACDLDTM-FSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G +LC    L T        GD M   P+  L       S   
Sbjct: 77  DYMLSQEHSQTCC-SPEGCKLCAMEALVTQSLLHSHSGDVM--KPSHIL------TSAFH 127

Query: 284 SYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC 340
            ++Q+DAHEF +  L+ +HE   +V + Q KP S+   D    H +F G  RS + C+ C
Sbjct: 128 KHQQEDAHEFLMFTLETMHESCLQVHR-QSKPTSE---DSSPIHDIFGGWWRSQIKCLLC 183

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
             TS T+D  +D  LD+   Q        T+                             
Sbjct: 184 QGTSDTYDRFLDIPLDISSAQSVKQALWDTE----------------------------- 214

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
             + E L  D  ++C +C+ +  + K + +   P V    + RF   +  K+ RKV    
Sbjct: 215 --KSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVS--- 269

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD-AGH 519
            +P  LD+ PYLS             P  G            + L+AV+ H G    +GH
Sbjct: 270 -YPEFLDLKPYLSE------------PTGG---------PLPYALYAVLVHDGATSHSGH 307

Query: 520 YVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           Y   ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 308 YFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 348


>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
           [Glycine max]
          Length = 369

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 170/409 (41%), Gaps = 105/409 (25%)

Query: 192 GD-LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK---NGVRL 245
           GD  P G R  GL N GNTC+ NSVLQAL+   P R   L      YY  +K   +G   
Sbjct: 13  GDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLL-----EYYGNNKSILDGEEN 67

Query: 246 CLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
            L C L  +FS I    +     +P +F+    +      SY  QDAHEF   +L+ + +
Sbjct: 68  LLTC-LADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126

Query: 304 KVEKDQHKPRS------------------QGNGD-----CCIAHRVFSGILRSDVMCMAC 340
            +EK+    ++                  Q NG          H+ F GIL ++  C+ C
Sbjct: 127 ILEKEAQAAKTDQETSPPSEKAVNGPKNGQANGVHKEPLVTWVHKNFQGILTNETRCLQC 186

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
              +   +  +D SLD+E N                               S++  CL  
Sbjct: 187 ETVTARDETFLDLSLDIEQN-------------------------------SSITSCLKN 215

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
           F+  E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   +
Sbjct: 216 FSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRV 275

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGH 519
            FPL L +                        SNT+ +   E+ LFAVV H G   + GH
Sbjct: 276 VFPLELKL------------------------SNTVEDADIEYSLFAVVVHVGSGPNHGH 311

Query: 520 YVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMFY 556
           YV+ ++  N W   DD  +  ++E+ V+               GY++FY
Sbjct: 312 YVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 360


>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
 gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
          Length = 369

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 171/410 (41%), Gaps = 107/410 (26%)

Query: 192 GD-LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNG------ 242
           GD  P G R  GL N GNTC+ NSVLQAL+   P R   L      YY  +K+G      
Sbjct: 13  GDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLL-----EYYANNKSGGDAEEN 67

Query: 243 VRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
           +  CLA DL T  S+      +  +P +F+    +      SY  QDAHEF   +L+ + 
Sbjct: 68  LLTCLA-DLFTQISSQKKKTGV-IAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELV 125

Query: 303 EKVEKDQHKPRS------------------QGNGD-----CCIAHRVFSGILRSDVMCMA 339
           + +EK+    +S                  Q NG          H+ F GIL ++  C+ 
Sbjct: 126 DILEKEAQAAKSDPETSSSPEKIPNGPKNGQANGVSKEPLVTWVHKNFQGILTNETRCLQ 185

Query: 340 CGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLD 399
           C   +   +   D SLD+E N                               S++  CL 
Sbjct: 186 CETVTARDETFFDLSLDIEQN-------------------------------SSITSCLK 214

Query: 400 RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRY 459
            F+  E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   
Sbjct: 215 NFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLSRYKKLSYR 274

Query: 460 LQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAG 518
           + FPL L +                        SNT+ +   E+ LFAVV H G   + G
Sbjct: 275 VVFPLELKL------------------------SNTVEDSDIEYSLFAVVVHVGSGPNHG 310

Query: 519 HYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMFY 556
           HYV+ ++  N W   DD  +  ++E+ V+               GY++FY
Sbjct: 311 HYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 360


>gi|148702708|gb|EDL34655.1| mCG13907, isoform CRA_b [Mus musculus]
          Length = 1037

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 105 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGG----FCMLCLMQNHMVQAF 160

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 161 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 220

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 221 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 258

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 259 ----------QAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 308

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 309 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDPVM----- 346

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 347 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 403

Query: 558 Q 558
           +
Sbjct: 404 R 404


>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
          Length = 1361

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|148702707|gb|EDL34654.1| mCG13907, isoform CRA_a [Mus musculus]
          Length = 1008

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGG----FCMLCLMQNHMVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
           [Sus scrofa]
          Length = 396

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 176/393 (44%), Gaps = 78/393 (19%)

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           + N    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S +     L 
Sbjct: 48  AKNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSA-HTALM 106

Query: 249 CDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
            +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V +
Sbjct: 107 EEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNR 166

Query: 308 DQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTT 346
              +P+S   G                     D  I   +F G L+S + C  CG+ ST 
Sbjct: 167 VTVRPKSSPEGLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCSTV 225

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
           FDP  D SL +                           + +     TLM C+  FT+ + 
Sbjct: 226 FDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKEDV 258

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-S 465
           L  D+K  C +C+ R+  +K+ S+++ P +   H+KRF  S +R  + K+  ++ FPL  
Sbjct: 259 LDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLRD 316

Query: 466 LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
           LD+  + S +I                        + + L+AV  H+G    GHY  Y R
Sbjct: 317 LDLREFASENI----------------------NHAVYNLYAVSNHSGTTMGGHYTAYCR 354

Query: 526 --LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             ++ +W+  +D+ ++ ++ + VR +  Y++FY
Sbjct: 355 SPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFY 387


>gi|226442882|ref|NP_001028700.1| ubiquitin carboxyl-terminal hydrolase 36 [Mus musculus]
 gi|251765139|sp|B1AQJ2.1|UBP36_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
           Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
           thioesterase 36; AltName:
           Full=Ubiquitin-specific-processing protease 36
          Length = 1098

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGG----FCMLCLMQNHMVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|255086105|ref|XP_002509019.1| predicted protein [Micromonas sp. RCC299]
 gi|226524297|gb|ACO70277.1| predicted protein [Micromonas sp. RCC299]
          Length = 374

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 164/380 (43%), Gaps = 77/380 (20%)

Query: 193 DLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
           DLP GL    N GNTCF  S LQ L+HT  L  +F  + H    C++      C+ C+  
Sbjct: 54  DLPAGL---CNSGNTCFAASALQCLYHTRLLTAHFADEPHPHDSCKNPG---FCVTCEYQ 107

Query: 253 T-MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH--------- 302
             +  A+    R  +S  K   +    A +     Q+D+HE+   +LDGIH         
Sbjct: 108 KHVLKALDAEPRGSFSIGKLTNAIGSIAKHFVRGRQEDSHEYIRGLLDGIHVQALKEFAG 167

Query: 303 EKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
           EK EK+    R+Q   +  I H +F G     V C+ CG  S  +   +D  +++     
Sbjct: 168 EKAEKEL-DARTQ---ETTIVHHIFGGYTCGQVECIQCGHVSRNYQSMIDIPVEVTAKSS 223

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
           S ++ +S KSN                           F   E L    K+ C +C+   
Sbjct: 224 SGIE-ASLKSN---------------------------FLDTEILDGSNKYKCARCRAYV 255

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSR--KVDRYLQFPLSLDMAPYLSSSILRSR 480
            + K   I   P V    +KR+       M R  K+ ++++FP +LD+ PY+S       
Sbjct: 256 RAEKGGKIHVSPNVLVVPLKRY------TMGRFSKITKFVEFPATLDLTPYMS------- 302

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHT---GKLDAGHYVTYLR-LSNKWYKCDDA 536
              R  P++G    T       + L+ VV H    G   +GHYV+Y+R L  +W KCDD 
Sbjct: 303 ---RDAPYEGKSPPT-------YTLYGVVVHLDWGGSAHSGHYVSYVRLLDGRWCKCDDG 352

Query: 537 WITEVNENTVRAAQGYMMFY 556
            I E +E TV   + Y++FY
Sbjct: 353 RIEETDEATVLKQKAYLLFY 372


>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
           [Canis lupus familiaris]
          Length = 1331

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 227

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 228 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 268

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 269 -------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTL 315

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 316 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 347

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + Q Y++
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407

Query: 555 FYVQ 558
           FY++
Sbjct: 408 FYIR 411


>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
          Length = 775

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 160/363 (44%), Gaps = 66/363 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTCF+NS LQ L HTPPL    ++  H +  C+ K+G   C++C +  + S  F
Sbjct: 180 GLFNQGNTCFLNSALQCLLHTPPLLRILMA--HTKAECRVKSG--FCMSCAMQEVSSDSF 235

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R  ++P     +    A +L    Q+DAHEF    +D + +               +
Sbjct: 236 KKGRA-FTPLPITRNLNSIAKHLRKGRQEDAHEFLRYAIDSLQKSCLAGYPPKIDHKLAE 294

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
               H++F G LRS V C  CG+ S TFD  +D S+D+                      
Sbjct: 295 TTWVHKIFGGQLRSRVTCQQCGYNSDTFDSILDLSIDI---------------------- 332

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      IS L   L +FT  + L    K+ C++C+    + KQ +I + P V   
Sbjct: 333 ---------YNISGLKEALKKFTAKDYLKGADKYKCEKCKRPVNAEKQFTIHEAPAVLTV 383

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           H+KRF       M RK+   +++   L + P +S               +G    T    
Sbjct: 384 HLKRFT-----PMGRKLQHPIRYDEVLSLQPAMS---------------EGQHGPT---- 419

Query: 500 SSEFELFAVVTHT-GKLDAGHYVTYLRLSN-KWYKCDDAWITEVNE-NTVRAAQGYMMFY 556
              ++L+ V++H  G  ++GHY  ++R  + +WY+ +D  +  V++   +     YM+FY
Sbjct: 420 ---YKLYGVISHMGGGPNSGHYFAHVRGGDGQWYEMNDDSVERVHKPEPLNMKNAYMLFY 476

Query: 557 VQK 559
           +++
Sbjct: 477 IRQ 479


>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
           florea]
          Length = 542

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 217/555 (39%), Gaps = 110/555 (19%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKT-SSACSHEIAVDVDRAELFCC 124
           C VCG       + C+ C A+ C       +VA HA +       H + +D +   +FC 
Sbjct: 29  CAVCGTEK--STWLCLYCGAIHC-----GRYVAGHALQHHEENTQHCVCIDCENLAVFCY 81

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK-----------RRRIDYRPWSPDLRE 173
            C + V +      +      +  +    EN              RR       +  L +
Sbjct: 82  MCDEYVINDTTSGQIEKIRRATFRKDEHKENEENWNTSPSTTPSSRRENSEDNDADALWK 141

Query: 174 RSLMVNNASP------IDSMSSSNGD--------------LPRGLRGLNNLGNTCFMNSV 213
             ++V N  P      + S+  ++GD                + + GL NLGNTCFMN V
Sbjct: 142 AEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKITSKEKKVVGLRNLGNTCFMNVV 201

Query: 214 LQAL--------------------FHTPPL-RNYFLSDRHNRYYCQSKNGVRLCLACDLD 252
           LQ+                     F  PP  R   ++    + +          LA +L 
Sbjct: 202 LQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMSDA-----LLAEELR 256

Query: 253 TMFSAIFCG--DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV----E 306
            +   +  G  +    SP       W+       Y+QQDAHEF   MLD +H ++     
Sbjct: 257 KVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLP 316

Query: 307 KDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
           +  H+P     G   I   VF G L S V CM C   S T +P  D SLD+ P++   ++
Sbjct: 317 RLGHEPLGL-RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI-PDR---LQ 371

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
             + +    C                +L   L RF + E L   + +FC  C  +Q S K
Sbjct: 372 RRTKEQEEVC----------------SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTK 415

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
           +  I +LP V C HIKRF   +  +   KVD  + FP+ SLDM+ +    +  ++ G   
Sbjct: 416 RFWIHRLPNVLCLHIKRFRWCNSYR--SKVDTQVDFPMKSLDMSAFTVRGVNGTKLG--- 470

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
                  SN     S  ++L AV+ H G     GHY  +     +W+  +D+ +     +
Sbjct: 471 ------ASN-----SHLYDLAAVIVHHGSGAGTGHYTAFAVHDGQWFHFNDSSVRPATTD 519

Query: 545 TVRAAQGYMMFYVQK 559
            V   + Y++FYV+K
Sbjct: 520 AVAKCKPYILFYVRK 534


>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
          Length = 396

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 172/393 (43%), Gaps = 78/393 (19%)

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           + N    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    + +     L 
Sbjct: 48  AKNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSA-HTALM 106

Query: 249 CDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
            +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H +V +
Sbjct: 107 EEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNR 166

Query: 308 DQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGFTSTT 346
              +P+                          D  I   +F G L+S + C  CG+ ST 
Sbjct: 167 VAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGYCSTV 225

Query: 347 FDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPER 406
           FDP  D SL +                           + +     TLM C+  FT+ + 
Sbjct: 226 FDPFWDLSLPI---------------------------AKRGYPEVTLMDCMRLFTKEDV 258

Query: 407 LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-S 465
           L  D+K  C +C+ R+  +K+ S+++ P +   H+KRF  S +R  + K+  ++ FPL  
Sbjct: 259 LDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIR--TSKLTTFVNFPLRD 316

Query: 466 LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR 525
           LD+  + S                       N   + + L+AV  H+G    GHY  Y R
Sbjct: 317 LDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYCR 354

Query: 526 --LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             ++ +W+  +D+ +T ++ + VR +  Y+ FY
Sbjct: 355 SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFY 387


>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
          Length = 1175

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 227

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 228 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 268

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 269 -------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTL 315

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 316 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 347

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + Q Y++
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407

Query: 555 FYVQ 558
           FY++
Sbjct: 408 FYIR 411


>gi|148702709|gb|EDL34656.1| mCG13907, isoform CRA_c [Mus musculus]
          Length = 1092

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 160 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGG----FCMLCLMQNHMVQAF 215

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 216 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 275

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 276 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 313

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 314 ----------QAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 363

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S S              GD        
Sbjct: 364 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQS-------------SGDPVM----- 401

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 402 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 458

Query: 558 Q 558
           +
Sbjct: 459 R 459


>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
           impatiens]
          Length = 541

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 218/554 (39%), Gaps = 109/554 (19%)

Query: 66  CGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACS-HEIAVDVDRAELFCC 124
           C VCG       + C+ C A+ C       +VA HA +     + H + +D +   +FC 
Sbjct: 29  CAVCGTEK--STWLCLYCGAIHC-----GRYVAGHALQHHEENNQHCVCIDCENLAVFCY 81

Query: 125 ACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRK-----------RRRIDYRPWSPDLRE 173
            C + V +      +      +  +    EN              RR       +  L +
Sbjct: 82  MCDEYVINDTTSGQIEKIRRVTFRKDEHKENEENWNTSPSTTPSSRRENSDDNDADALWK 141

Query: 174 RSLMVNNASP------IDSMSSSNGD-------------LPRGLRGLNNLGNTCFMNSVL 214
             ++V N  P      + S+  ++GD               + + GL NLGNTCFMN VL
Sbjct: 142 AEVVVRNLRPRTARKRLHSLDGTSGDNRPTTKRRSSKITKEKKVVGLRNLGNTCFMNVVL 201

Query: 215 QAL--------------------FHTPPL-RNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           Q+                     F  PP  R   ++    + +          LA +L  
Sbjct: 202 QSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMSDA-----LLAEELRK 256

Query: 254 MFSAIFCG--DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV----EK 307
           +   +  G  +    SP       W+       Y+QQDAHEF   MLD +H ++     +
Sbjct: 257 VLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPR 316

Query: 308 DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
             H+P     G   I   VF G L S V CM C   S T +P  D SLD+ P++   ++ 
Sbjct: 317 LGHEPLGL-RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI-PDR---LQR 371

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
            + +    C                +L   L RF + E L   + +FC  C  +Q S K+
Sbjct: 372 RTKEQEEVC----------------SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKR 415

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFF 486
             I +LP V C HIKRF   +  +   KVD  + FP+ SLDM+ +    +  ++ G    
Sbjct: 416 FWIHRLPNVLCLHIKRFRWCNSYR--SKVDTQVDFPMKSLDMSAFTVRGVSGTKLG---- 469

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENT 545
                 SN     S  ++L AV+ H G     GHY  +     +W+  +D+ +     + 
Sbjct: 470 -----ASN-----SHLYDLAAVIVHHGSGAGTGHYTAFAVHDGQWFHFNDSSVRPATTDA 519

Query: 546 VRAAQGYMMFYVQK 559
           V   + Y++FYV+K
Sbjct: 520 VAKCKPYILFYVRK 533


>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
          Length = 1202

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
          Length = 1198

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
          Length = 927

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 168/392 (42%), Gaps = 78/392 (19%)

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN--GVRLCLAC 249
           G + RG  GL NLGNTC+MNS++Q+L    PL   FL+D++ R     KN  G +  +A 
Sbjct: 578 GSIERGYTGLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKY-RADINKKNFLGHKGLVAE 636

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
               +   ++ G    + P  F  +         +Y+QQDA E  I +LDG+HE + K +
Sbjct: 637 HFAVVAKGLWHGGFKNFQPRMFKEALASCNPIFGNYKQQDAQELLIFLLDGLHEDLNKVK 696

Query: 310 -----HKPRSQGNGDCCIAHR---------------VFSGILRSDVMCMACGFTSTTFDP 349
                 +  + G  D  +A                 +F G  ++ + C++C FTS  FD 
Sbjct: 697 DRRYIEEKDADGRPDQLVADESWENHTRLNKSIIVDLFQGQFKATIKCLSCKFTSVKFDA 756

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
            +  SL +                                G +TL  CL+ F + E+L  
Sbjct: 757 FMFLSLPI-----------------------------PTSGKATLESCLNLFQQTEKLTG 787

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDM 468
           D ++ C +C+  +++ + + + ++P +   H+KRF+     +   KV   + +P +  D+
Sbjct: 788 DDRWTCPKCKRARDAERTLRLWRMPTLLIIHLKRFKSDG--RWKSKVSTNISYPTTGFDL 845

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS 527
            P           G +  P               + L AV  H G   D+GHYV   R +
Sbjct: 846 KP--------QTLGKKKQP--------------PYNLIAVTHHIGASTDSGHYVASCRRA 883

Query: 528 NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             W K DDA +T ++E+   +   Y++FY  K
Sbjct: 884 KGWVKADDAEVTAISESKAISPTAYILFYSSK 915


>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
          Length = 1234

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
          Length = 1317

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|340508522|gb|EGR34211.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
           multifiliis]
          Length = 547

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 170/384 (44%), Gaps = 72/384 (18%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC-QSKNGVRLCLACDLDTMF 255
           GL GL NLGNTC++N+ LQ L +TPPL +YFLS  H +     +  G    +      + 
Sbjct: 79  GLVGLYNLGNTCYINAALQCLSNTPPLCDYFLSQLHEKEINPNAFLGSNGQITSQFGKLI 138

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
             ++  D+    P  F+    + A   A   QQD+HEF   +LD +HE + +   KP  +
Sbjct: 139 LDLWQTDQNFIEPIDFINEIGQFAEQFADGTQQDSHEFLAFLLDILHEDLNRVIKKPYIK 198

Query: 316 GNGDCCIAHR--------------------VFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
                C  H                     +F G  +S + C+ CG  S  F        
Sbjct: 199 EKDYNCEKHEEYSKESWKEYLMRNKSIIVDLFQGQTKSTLKCLVCGSVSHKF-------- 250

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
             E  Q  S+   + KS++                I  L  C+  FT+ E L  ++ ++C
Sbjct: 251 --EAFQFLSVPVPANKSHNE---------------IINLSECIQEFTKEEYLDQNEWWYC 293

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSS 474
            +C+  ++S KQ+ + KLP +   H+KRF     + +  K+  ++ FP+ + D+ PY   
Sbjct: 294 FKCKKNRKSTKQIDLWKLPNILIIHLKRFRFD--KNIKAKIKNFVDFPIQNFDLQPY--- 348

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL--RLSNKWYK 532
           +I R R                ++P   ++LFA+  H G L +GHY  Y   R +  WY 
Sbjct: 349 TIGRQR----------------DQPI--YDLFAISNHEGNLSSGHYTAYAKNRANQNWYL 390

Query: 533 CDDAWITEVNENTVRAAQGYMMFY 556
            DD  + +  +  +++ + Y++FY
Sbjct: 391 FDDCNVQQCLKEQIKSEKAYVLFY 414


>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
           boliviensis boliviensis]
          Length = 1319

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 227

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 228 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 268

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 269 -------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTL 315

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 316 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 347

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + Q Y++
Sbjct: 348 NGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407

Query: 555 FYVQ 558
           FY++
Sbjct: 408 FYIR 411


>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
          Length = 1325

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
 gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2
 gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
 gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
 gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
          Length = 606

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 178/397 (44%), Gaps = 81/397 (20%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           D+M+S +    +GL GL NLGNTCFMNS+LQ L +T  LR+Y L   + R    S     
Sbjct: 257 DTMNSKSA---QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRA-H 312

Query: 245 LCLACDLDTMFSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
             L  +   +   I+        SP++F     R+A     Y QQDA EF   +LDG+H 
Sbjct: 313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372

Query: 304 KVEKDQHKPRSQGNG---------------------DCCIAHRVFSGILRSDVMCMACGF 342
           +V +   +P+S                         D  I   +F G L+S + C  CG+
Sbjct: 373 EVNRVIARPKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGD-LFVGQLKSSLTCTDCGY 431

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            ST FDP  D SL +            TK  +                  TLM C+  FT
Sbjct: 432 CSTVFDPFWDLSLPI------------TKRGYPE---------------VTLMDCMRLFT 464

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + + L  D+K  C +C+ R+  +K+ SI++ P +   H+KRF  S +R  + K+  ++ F
Sbjct: 465 KEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIR--TSKLTAFVNF 522

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL  LD+  + S                       N   + + L+AV  H+G    GHY 
Sbjct: 523 PLRDLDLREFASE----------------------NTNHAVYNLYAVSNHSGTTMGGHYT 560

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            Y R  ++ +W+  +D+ ++ ++ + VR +  Y++FY
Sbjct: 561 AYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFY 597


>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
           mulatta]
          Length = 1317

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|225465557|ref|XP_002275104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
 gi|297745125|emb|CBI38964.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 174/407 (42%), Gaps = 106/407 (26%)

Query: 194 LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN------GVRL 245
            P G R  GL N GNTC+ NSVLQAL+   P R   L      YY ++KN       +  
Sbjct: 16  FPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLL-----EYYAKNKNLGDPEENLLT 70

Query: 246 CLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
           CLA DL T  S+      +  +P +F+    +      SY  QDAHEF   +L+ + + +
Sbjct: 71  CLA-DLFTQISSQKKKTGV-IAPKRFVQRVRKQNELFRSYMHQDAHEFLNYLLNELVDIL 128

Query: 306 EKDQHKPRS----------QGNGD-------------CCIAHRVFSGILRSDVMCMACGF 342
           EK+ H  ++            NG                  H+ F G+L ++  C+ C  
Sbjct: 129 EKESHVAKTLPDESLPSGQTANGPRNAPTNGVQREPLVTWVHKNFQGLLTNETRCLRCET 188

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            +   +  +D SLD+E N                               S++  CL  F+
Sbjct: 189 VTARDETFLDLSLDIEQN-------------------------------SSITSCLKNFS 217

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
             E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   + F
Sbjct: 218 STETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRHKKLSYRVVF 277

Query: 463 PLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYV 521
           PL L +A                        N++ +  SE+ LFAVV H G   + GHYV
Sbjct: 278 PLELKLA------------------------NSMEDVDSEYTLFAVVVHVGSGPNHGHYV 313

Query: 522 TYLRLSNKWYKCDDAWITEVNENTVR----AAQ--------GYMMFY 556
           + ++  N W   DD  +  ++E+ V+    +AQ        GY++FY
Sbjct: 314 SLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 360


>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
 gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
          Length = 1325

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
          Length = 1324

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
          Length = 1324

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
          Length = 1316

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|93279989|pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin
           Carboxyl-terminal Hydrolase 8
          Length = 396

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 180/404 (44%), Gaps = 82/404 (20%)

Query: 181 ASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYF----LSDRHNRYY 236
           AS I +++   G     L GL NLGNTC+ NS+LQ L + P L +YF      D  NR  
Sbjct: 45  ASQIRNLNPVFGGSGPALTGLRNLGNTCYXNSILQCLCNAPHLADYFNRNCYQDDINRSN 104

Query: 237 CQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFIS 296
                G    +A +   +  A++ G     SP  F  +  +     A Y QQD+ E  + 
Sbjct: 105 LLGHKGE---VAEEFGIIXKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLF 161

Query: 297 MLDGIHEKVEK-DQHKPRSQGNGDCC-------------------IAHRVFSGILRSDVM 336
           + DG+HE + K D  K   + N D                     I   +F G  +S V 
Sbjct: 162 LXDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQ 221

Query: 337 CMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
           C+ C   S TF+     SL L                           S+  C   TL  
Sbjct: 222 CLTCHKKSRTFEAFXYLSLPLA--------------------------STSKC---TLQD 252

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           CL  F++ E+L  + +F+C  C+ R++SLK++ I KLP V   H+KRF +    +  +K+
Sbjct: 253 CLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQKL 310

Query: 457 DRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL 515
              + FPL +LD++ Y+                 G ++N       ++ LF+V  H G L
Sbjct: 311 QTSVDFPLENLDLSQYVI----------------GPKNNL-----KKYNLFSVSNHYGGL 349

Query: 516 DAGHYVTYLRLS--NKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
           D GHY  Y + +   +W+K DD  +++++ ++V+++  Y++FY 
Sbjct: 350 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYT 393


>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
          Length = 1333

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
          Length = 1350

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
          Length = 1316

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
 gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
          Length = 1316

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|359324297|ref|XP_003640330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Canis lupus familiaris]
          Length = 645

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 185/426 (43%), Gaps = 82/426 (19%)

Query: 150 SSKPENLRKRRRIDYRPWSPDLRERSLMVNN--ASPIDSMSSSNGDLP--------RGLR 199
           S KP++   RR        P + ER+   +   +SP D ++ ++  LP        + L 
Sbjct: 127 SPKPQSYWSRRGGAEVHGGPSVPERTSPASKTLSSPTDPLAPASAGLPPTKTPLSWKSLS 186

Query: 200 ----GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
               GL N+GNTC++N+ LQ L +T PL +Y LS +H    C+ +     C+ C L T  
Sbjct: 187 QVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTT-CRRQTS---CMLCTLQTHL 242

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
             + C       P + L       +    ++Q+DAHE+ + +LD + +    +      +
Sbjct: 243 MRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPE 296

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D  +  ++F G  RS + C+ C   S+T +P +D SLD+                  
Sbjct: 297 CPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDI------------------ 338

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                D  + SQ          L++  +PE L  +  + C +C  +  + K +++   P 
Sbjct: 339 ----GDAHSVSQ---------ALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPK 385

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    ++RF   +  KM+++V    Q+P  LDM  YLS          R  P        
Sbjct: 386 VLILVLRRFSDLTGNKMTKEV----QYPERLDMQHYLSE--------QRAGPL------- 426

Query: 496 LNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ H G+   +GHY  +++  N +WYK DDA ++  +         Y+
Sbjct: 427 ------VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYV 480

Query: 554 MFYVQK 559
           +FY+QK
Sbjct: 481 LFYMQK 486


>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
           troglodytes]
 gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
 gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
          Length = 1316

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
          Length = 1316

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
          Length = 1304

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 69/364 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   +    R A +     Q+DAHEF    +D + +      +K        
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQAT 227

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +  ++F G LRS V C+ C   S TFDP +D +L+++  Q                  
Sbjct: 228 TLVC-QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------------ 268

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++F +PE+L  +  + C +C+    + K+ +I +   V   
Sbjct: 269 -------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTL 315

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + +  K+++ V    ++P  LD+ PY+S                        +P
Sbjct: 316 SLKRFANFTGGKIAKDV----KYPEYLDIRPYMS------------------------QP 347

Query: 500 SSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMM 554
           + E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + Q Y++
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407

Query: 555 FYVQ 558
           FY++
Sbjct: 408 FYIR 411


>gi|379030637|ref|NP_001243803.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4
           [Homo sapiens]
 gi|187663999|sp|A6NCW7.3|U17L4_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
           17-like protein 4
          Length = 530

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+ N+ LQ L +T PL NY LS  H++  CQ     + C+ C +    +   
Sbjct: 81  GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQ-TCQRP---KCCMLCTMQAHITWAL 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                 +SP   +      A+     +Q+D HEF +  +D + +K     HK     + D
Sbjct: 137 ------HSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAM-KKACLPGHKQVDHHSKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  +   +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVAGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     G+Y +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|414869933|tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
           protein [Zea mays]
          Length = 973

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 226/533 (42%), Gaps = 102/533 (19%)

Query: 54  AAIRRDSSEVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEI- 112
           A++  D S+        DSS P   A +   + S   P    HV +  +KT SA +  I 
Sbjct: 307 ASVVEDCSQTSSTRELEDSSIPHAAASVVLESKSSRTP---IHVELERSKTKSAGNDSIQ 363

Query: 113 -------AVDVDRAELF----------CCACRDQVYDRDFDAAVVLAHTTSIIQSSKPEN 155
                  A+ VD+A                  D + DR F  +     TT+ + +S  + 
Sbjct: 364 STKPVPSALTVDKATSVRGSLSITPNNSSKVADSLPDRSFKPSDRSGSTTNNLATSLKKM 423

Query: 156 LRKR---RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNS 212
           +R++   + + + P    L    L V   S ++              GL+NLGN+C+ N+
Sbjct: 424 VRQQTAPKVVRHYPSESTLFPYELFVKLYSKVELHP----------FGLHNLGNSCYANA 473

Query: 213 VLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR--MPYSPAK 270
           V Q L  T PL  Y L   H++  C S+NG   C  C+ + +   I  G R  +  SP  
Sbjct: 474 VFQCLMFTRPLTTYLLEGLHSKN-C-SQNG--WCFMCEFEKL---IVEGKRRKIALSPTG 526

Query: 271 FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS-QGNGDCCIAHRVFSG 329
            L       S+    +Q+DAHEF    +D +     K+  K    Q   +  +   +F G
Sbjct: 527 ILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKGGVLQSAEETTLVQLIFGG 586

Query: 330 ILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNC 389
            LRS + C  C  +S   +P +D +++++ +                             
Sbjct: 587 YLRSKIKCSRCHVSSEQCEPMLDLTVEIDGD----------------------------- 617

Query: 390 GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV 449
            IS+L   L RFT  E L  + K+ C +C+  + + K+++I + P +    +KR++    
Sbjct: 618 -ISSLGEALVRFTSTEVLDGENKYHCSRCKSYERAKKKLTIEEAPNILTIALKRYQSGKF 676

Query: 450 RKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
            K+S+ +    +FP +L++A Y++               D D+ + +      + L+AVV
Sbjct: 677 GKISKAI----RFPETLNLARYMNP--------------DTDDISPV------YSLYAVV 712

Query: 510 THTGKLDA---GHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQ 558
            H   ++A   GHYV Y++    KW+K DD+ +  V+ + V +   YM+ Y +
Sbjct: 713 VHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYMLLYAR 765


>gi|226531818|ref|NP_001142184.1| uncharacterized protein LOC100274352 [Zea mays]
 gi|194703162|gb|ACF85665.1| unknown [Zea mays]
 gi|194707512|gb|ACF87840.1| unknown [Zea mays]
 gi|414865257|tpg|DAA43814.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
           protein [Zea mays]
          Length = 366

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 168/405 (41%), Gaps = 103/405 (25%)

Query: 194 LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL---CLA 248
            P G R  GL N GNTC+ NSVLQAL+   P R+  L      YY  +KN   +    L 
Sbjct: 16  FPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLL-----EYYANNKNTGDVEENMLT 70

Query: 249 CDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
           C L  +FS I    +     +P +F+    +      SY  QDAHEF   +L+ + + +E
Sbjct: 71  C-LADLFSQISSQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILE 129

Query: 307 KDQHKPRS-----------------QGNGD-----CCIAHRVFSGILRSDVMCMACGFTS 344
           K+ +  R                  Q NG          H+ F GIL ++  C+ C   +
Sbjct: 130 KEHNAARESLQNLSLQKNSNGPIDGQPNGSHKELAVTWVHKCFQGILTNETRCLRCETVT 189

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
              +   D SLD+E N                               S+L  CL  F+  
Sbjct: 190 DRDETFFDLSLDIEQN-------------------------------SSLTSCLKNFSST 218

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++    +  +K+   + FPL
Sbjct: 219 ETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPL 278

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTY 523
            L +                         NT++    E+ LFAVV H G   + GHY++ 
Sbjct: 279 ELKLL------------------------NTVDNSDLEYSLFAVVVHVGSGPNHGHYISL 314

Query: 524 LRLSNKWYKCDDAWITEVNENTVRA------------AQGYMMFY 556
           ++  N W   DD  +   +E+ V+A              GY++FY
Sbjct: 315 VKSHNHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGYILFY 359


>gi|224138132|ref|XP_002326526.1| predicted protein [Populus trichocarpa]
 gi|222833848|gb|EEE72325.1| predicted protein [Populus trichocarpa]
          Length = 835

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 167/369 (45%), Gaps = 59/369 (15%)

Query: 195 PRGL-RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
           P G+   L N GNTC++N++LQ   HT PL     S  H    C ++     C+ C L  
Sbjct: 270 PTGVGAALFNKGNTCYINAILQCFTHTVPLVQALRSCNH-EMPCITEG---FCVLCVLRD 325

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
                         P K + +    +S    Y+Q+DAHEF   +L+ +            
Sbjct: 326 HIELSLSSSGKILEPLKLVNNLENISSVFRRYQQEDAHEFLQCLLERLERHCLDSSLTDD 385

Query: 314 SQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
           S  + D  I  RVF G L S + C  CG  S  ++P +D SL++E               
Sbjct: 386 SASSHDKNIVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIE--------------- 430

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERL-GSDQKFFCQQCQVRQESLKQMSIRK 432
                +AD + S+           L+ FT+ E++  S+ KF C+ C+      KQ+ + +
Sbjct: 431 -----DADSLQSA-----------LESFTKVEKIEDSETKFTCESCKEEVSREKQLMLDQ 474

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDE 492
            P V+  H+K F+         K+ +++QFPL LD+ PY +               D ++
Sbjct: 475 APSVAALHLKIFKIDGTS--VEKIGKHVQFPLELDLKPYTN---------------DNED 517

Query: 493 SNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQ 550
           S   +E   +++L+AVV H G  L +GHY  Y+R S + W+K DD  +++  E  V +  
Sbjct: 518 S---DEVGFKYQLYAVVVHKGDSLMSGHYFCYIRSSPDTWHKLDDPEVSKEQEEFVLSQA 574

Query: 551 GYMMFYVQK 559
            Y++FY ++
Sbjct: 575 AYILFYARE 583


>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 42 [Ovis aries]
          Length = 1264

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 166

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 167 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 223

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 224 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 267

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 268 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 309

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 310 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 344

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 345 ---QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 401

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 402 QAYVLFYIR 410


>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
          Length = 545

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 69/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAI 258
           GL N GN+C++N+ LQ L HTPPL +Y LS  +++  C S  G ++C +   +       
Sbjct: 52  GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC-SPEGCKMCAMEAHVTQSLLHS 110

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
             GD M   P++ L       S    ++Q+DAHEF +  L+ +HE   +  H+     + 
Sbjct: 111 HSGDVM--KPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQ-VHRQSEPTSE 161

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D    H +F G+ RS + C+ C  TS T+D  +D  LD+   Q  +     T+       
Sbjct: 162 DSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTE------- 214

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                                   + E L  +  ++C +C+ +  + K + I   P V  
Sbjct: 215 ------------------------KSEELRGENAYYCGRCRQKMPASKTLHIHSAPKVLL 250

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF       M  K+DR + +P  LD+ PYLS             P  G        
Sbjct: 251 LVLKRFS----AFMGNKLDRKVSYPEFLDLKPYLSQ------------PTGG-------- 286

Query: 499 PSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H G    +GHY +Y++  +  WYK DD  +T  +  +V     Y++FY
Sbjct: 287 -PLPYALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFY 345

Query: 557 VQK 559
           VQ+
Sbjct: 346 VQQ 348


>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
           mutus]
          Length = 1304

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|390353834|ref|XP_001179436.2| PREDICTED: uncharacterized protein LOC754104 [Strongylocentrotus
           purpuratus]
          Length = 1340

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 60/362 (16%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTCF+NS LQ L +T PL NY LS +H +  C+S      C+ CDL T     F
Sbjct: 135 GLINMGNTCFLNSTLQCLTYTAPLANYLLSHQH-KEECRS---YGFCILCDLYTHIQRAF 190

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P   ++     A ++    Q+DAHEF   +++ + +           + + +
Sbjct: 191 QHPNQAIRPMNMIHKLKSIAKHMHIGRQEDAHEFLRYVIEAMQKSCLSGYDNKLDRYSKE 250

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
               H++F G  RS V+C AC   S TFDP +D SLD++               H+    
Sbjct: 251 TSPVHQIFGGYYRSRVICAACQSKSDTFDPFLDISLDIK---------------HA---- 291

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L+R  + E L  D  + C++C  +  + K+ +I + P +   
Sbjct: 292 ------------PSVHKALNRLIQSEMLDGDNAYQCKRCNRKVLAQKRFTIHRCPNILTL 339

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRFE +  R    K+++ + +   L++ P++S +                       P
Sbjct: 340 CLKRFEFN--RFSMGKINKEVSYSEYLNLRPFMSET---------------------KGP 376

Query: 500 SSEFELFAVVTHTGKL-DAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYV 557
           +  ++L+AV+ H G   ++GHY  Y+R  N+ WY  +D+++++ + N V     Y++FY+
Sbjct: 377 AVGYQLYAVLKHEGGSCNSGHYYCYVRAPNQSWYCMNDSYVSQCSLNRVLNQNAYVLFYI 436

Query: 558 QK 559
           +K
Sbjct: 437 RK 438


>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
 gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
          Length = 548

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDP------- 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 -VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
           leucogenys]
          Length = 1315

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++ SN  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIR 411


>gi|332017535|gb|EGI58246.1| Ubiquitin carboxyl-terminal hydrolase 8 [Acromyrmex echinatior]
          Length = 1005

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 175/391 (44%), Gaps = 67/391 (17%)

Query: 185 DSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH-NRYYCQSKNGV 243
           + M+  +G +  G+ GL NLGN+C+MNS++Q L +T  L  YF  + + +     + N  
Sbjct: 657 ERMTPIHGTVHPGITGLKNLGNSCYMNSIIQCLSNTTNLAKYFTDNSYADDLNTNNDNMT 716

Query: 244 RLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
           +  +  ++  +  A++ G     SP     +  ++     SYEQQD+HEF   +LD +H 
Sbjct: 717 QGQVVEEVAQVIKALWRGQYKSISPYDLKVAVGQYKLQFESYEQQDSHEFLTFLLDWMHN 776

Query: 304 KVEKDQHKPRSQGNGDC----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDF 353
           +++K+   P    N +            I   +F G LRS + C  C   STT++     
Sbjct: 777 ELKKNVKMPIEITNAEKEWDKAMNSQRSIISDLFFGQLRSTITCSFCKQASTTYETFNSL 836

Query: 354 SLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKF 413
           ++ L                          + S  C   TL  C+++F   +++     +
Sbjct: 837 TMSL--------------------------SQSNRC---TLNDCMEKFVTGQKVSG---W 864

Query: 414 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS--VRKMSRKVDRYLQFPLS-LDMAP 470
            C +CQ  +++ K+    KL  +   H+ RF  S   + K +  VD    FPL+  ++ P
Sbjct: 865 KCPKCQTPRDATKKFDFVKLAPIVVIHLNRFAESGGWLEKRNTAVD----FPLTGFNLKP 920

Query: 471 YLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS--N 528
           YL     ++   N    ++             + L+A+  H G +D GHY  + + S  N
Sbjct: 921 YLVLENTKAIMSNNIRNYN-------------YTLYAISNHYGTMDGGHYTAFCKNSTQN 967

Query: 529 KWYKCDDAWITEVNENTVRA--AQGYMMFYV 557
           KWYK DD  +TEV+ N V++     Y++FY 
Sbjct: 968 KWYKYDDQTVTEVSPNQVKSQNTSAYLLFYT 998


>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
          Length = 545

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 69/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAI 258
           GL N GN+C++N+ LQ L HTPPL +Y LS  +++  C S  G ++C +   +       
Sbjct: 52  GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC-SPEGCKMCAMEAHVTQSLLHS 110

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
             GD M   P++ L       S    ++Q+DAHEF +  L+ +HE   +  H+     + 
Sbjct: 111 HSGDVM--KPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQ-VHRQSEPTSE 161

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D    H +F G+ RS + C+ C  TS T+D  +D  LD+   Q  +     T+       
Sbjct: 162 DSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTE------- 214

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                                   + E L  +  ++C +C+ +  + K + I   P V  
Sbjct: 215 ------------------------KSEELRGENAYYCGRCRQKMPASKTLHIHSAPKVLL 250

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF       M  K+DR + +P  LD+ PYLS             P  G        
Sbjct: 251 LVLKRFS----AFMGNKLDRKVSYPEFLDLKPYLSQ------------PTGG-------- 286

Query: 499 PSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H G    +GHY +Y++  +  WYK DD  +T  +  +V     Y++FY
Sbjct: 287 -PLPYALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFY 345

Query: 557 VQK 559
           VQ+
Sbjct: 346 VQQ 348


>gi|242036661|ref|XP_002465725.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
 gi|241919579|gb|EER92723.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
          Length = 366

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 169/405 (41%), Gaps = 103/405 (25%)

Query: 194 LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL---CLA 248
            P G R  GL N GNTC+ NSVLQAL+   P R+  L      YY  +KN   +    L 
Sbjct: 16  FPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLL-----EYYANNKNTGDVEENMLT 70

Query: 249 CDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
           C L  +FS I    +     +P +F+    +      SY  QDAHEF   +L+ + + +E
Sbjct: 71  C-LADLFSQISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILE 129

Query: 307 KDQHKPRS-------QGNGDCCI---------------AHRVFSGILRSDVMCMACGFTS 344
           K+ +  R        Q N +  I                H+ F GIL ++  C+ C   +
Sbjct: 130 KEHNAAREPLQNLPFQKNSNGTIDGQPNGSHKELAATWVHKCFQGILTNETRCLRCETVT 189

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
              +   D SLD+E N                               S+L  CL  F+  
Sbjct: 190 DRDETFFDLSLDIEQN-------------------------------SSLTSCLKNFSST 218

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++    +  +K+   + FPL
Sbjct: 219 ETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPL 278

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTY 523
            L +                         NT++    E+ LFAVV H G   + GHY++ 
Sbjct: 279 ELKLL------------------------NTVDNSDLEYSLFAVVVHVGSGPNHGHYISL 314

Query: 524 LRLSNKWYKCDDAWITEVNENTVRA------------AQGYMMFY 556
           ++  N W   DD  +   +E+ V+A              GY++FY
Sbjct: 315 VKSHNHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGYILFY 359


>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
 gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
 gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
          Length = 545

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 69/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAI 258
           GL N GN+C++N+ LQ L HTPPL +Y LS  +++  C S  G ++C +   +       
Sbjct: 52  GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC-SPEGCKMCAMEAHVTQSLLHS 110

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
             GD M   P++ L       S    ++Q+DAHEF +  L+ +HE   +  H+     + 
Sbjct: 111 HSGDVM--KPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQ-VHRQSEPTSE 161

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D    H +F G+ RS + C+ C  TS T+D  +D  LD+   Q  +     T+       
Sbjct: 162 DSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTE------- 214

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                                   + E L  +  ++C +C+ +  + K + I   P V  
Sbjct: 215 ------------------------KSEELRGENAYYCGRCRQKMPASKTLHIHSAPKVLL 250

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF       M  K+DR + +P  LD+ PYLS             P  G        
Sbjct: 251 LVLKRFS----AFMGNKLDRKVSYPEFLDLKPYLSQ------------PTGG-------- 286

Query: 499 PSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H G    +GHY +Y++  +  WYK DD  +T  +  +V     Y++FY
Sbjct: 287 -PLPYALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFY 345

Query: 557 VQK 559
           VQ+
Sbjct: 346 VQQ 348


>gi|379030635|ref|NP_001243802.1| putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1
           [Homo sapiens]
 gi|74723224|sp|Q7RTZ2.1|U17L1_HUMAN RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase
           17-like protein 1; AltName: Full=Deubiquitinating enzyme
           17-like protein 1; AltName: Full=Ubiquitin thioesterase
           17-like protein 1; AltName:
           Full=Ubiquitin-specific-processing protease 17-like
           protein 1
 gi|33186790|tpe|CAD66056.1| TPA: ubiquitin-specific protease 17-like protein [Homo sapiens]
          Length = 530

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 69/370 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GNTC+ N+ LQ L +T PL NY LS  H++  CQ     + C+ C +    +   
Sbjct: 81  GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQ-TCQRP---KCCMLCTMQAHITWAL 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                 +SP   +      A+     +Q+D HEF +  +D + +K     HK       D
Sbjct: 137 ------HSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAM-KKACLPGHKQVDHHCKD 189

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G  RS + C+ C   S TFDP +D +LD++  Q                  
Sbjct: 190 TTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ------------------ 231

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        ++   L++  +PE L  +  + C  C  R  +   +++     V   
Sbjct: 232 -------------SVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLIL 278

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF   +  K+++ V    Q+P  LDM PY+S                       N  
Sbjct: 279 VLKRFSDVAGNKLAKNV----QYPECLDMQPYMSQQ---------------------NTG 313

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G     GHY +Y++    +WYK DDA +T  +  +V + Q Y++FY+
Sbjct: 314 PLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYI 373

Query: 558 QKMLYYKASE 567
           QK  + + SE
Sbjct: 374 QKSEWERHSE 383


>gi|194034732|ref|XP_001927691.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Sus scrofa]
          Length = 373

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 169/376 (44%), Gaps = 72/376 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     +  + V    A     + 
Sbjct: 41  QGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFA----YVM 96

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + ++ GD    SP  F  +       L    QQDA EF I +L+ +HE ++K  H+ RS 
Sbjct: 97  TDMWLGDSECVSPEIFRSALGNLYPALMKKTQQDAQEFLIYVLNELHEALKK-YHRRRSY 155

Query: 316 GNGD---CC---------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
            N     CC         I  R+F G L   ++C+ C   + T+            N+  
Sbjct: 156 ENRSIPRCCRKMIASESSIITRLFEGQLSYSIICLKC--ENCTYK-----------NEVF 202

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           ++      S + C                +L  CL  F + + L  + +  C  C+ +QE
Sbjct: 203 TVLPLPIPSEYEC----------------SLQDCLQCFFQQDTLTWNNQIHCSFCETKQE 246

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFG 482
           +  + SI K P +  FH+KRF+   +  M RK+   + +PL+ LD+ PY+   I R    
Sbjct: 247 TAVRASISKAPKIIVFHLKRFD--ILGTMKRKLRTDIHYPLTNLDLTPYI-CPIFRKH-- 301

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITE 540
                              ++ L AVV H G LD GHY  + +  ++  WY  DD  ++E
Sbjct: 302 ------------------PKYNLCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSE 343

Query: 541 VNENTVRAAQGYMMFY 556
           + + +V+ A  Y++FY
Sbjct: 344 IPDTSVQTATAYLLFY 359


>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
          Length = 470

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 160/382 (41%), Gaps = 82/382 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C  D  +S   
Sbjct: 140 GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTCLADLFYSIAT 194

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKPRSQ- 315
              ++   +P KF+    +      +Y QQDAHEF   +++ I+E +  E+ Q KP    
Sbjct: 195 QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERTQSKPTGGK 254

Query: 316 -GNGDCC-------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
            G GD           H +F GIL S+  C+ C   S+  +   D  +D++ N       
Sbjct: 255 CGAGDAAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN------- 307

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
                                   +++  CL  F+  E L SD KF C  C   QE+ K+
Sbjct: 308 ------------------------TSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKR 343

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           M ++KLP++   H+KRF++        KV   + FPL L                 R F 
Sbjct: 344 MRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFN 386

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
              D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+
Sbjct: 387 TSDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTI 442

Query: 547 R------------AAQGYMMFY 556
                        +  GY++FY
Sbjct: 443 EDFYGLTSDIQKSSETGYILFY 464


>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
          Length = 526

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 174/401 (43%), Gaps = 76/401 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V     ++   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 17  PDAPELHQDEAQVVEELTVNGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P+  L       S   
Sbjct: 77  DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHSHSGDVM--KPSHIL------TSAFH 127

Query: 284 SYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC 340
            ++Q+DAHEF +  L+ +HE   +V + Q KP S+   D    H +F G  RS + C+ C
Sbjct: 128 KHQQEDAHEFLMFTLETMHESCLQVHR-QSKPTSE---DSSPIHDIFGGWWRSQIKCLLC 183

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
             TS T+D  +D  LD+   Q        T+                             
Sbjct: 184 QGTSDTYDCFLDIPLDISSAQSVKQALWDTE----------------------------- 214

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
             + E L  D  ++C +C+ +  + K + +   P V    + RF   +  K+ RKV    
Sbjct: 215 --KSEELCGDNAYYCGKCREKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVS--- 269

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD-AGH 519
            +P  LD+ PYLS             P  G            + L+AV+ H G    +GH
Sbjct: 270 -YPEFLDLKPYLSE------------PTGG---------PLPYALYAVLVHDGATSHSGH 307

Query: 520 YVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           Y   ++  + KWYK DD  +T  +  +V     Y++FYVQ+
Sbjct: 308 YFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 348


>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
          Length = 954

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDP------- 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 -VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|297468710|ref|XP_002706267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
           taurus]
          Length = 763

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 71/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+ LQ L HTPPL ++ +S +H    C +++   LC A       + + 
Sbjct: 93  GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHA-TLCPARSACTLC-AMRAHVTRALLH 150

Query: 260 CGDRMPYSPAK-FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
            G+ +   P K  L  + RH       +Q+DAHEF +  L+ + +       +P    + 
Sbjct: 151 AGEVI--RPRKDLLAGFHRH-------QQEDAHEFLMFTLNAMQQGC-LSASQPSGHASE 200

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D  +  ++F G  RS + C+ C   S TFDP +D SLD+   Q                 
Sbjct: 201 DTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ----------------- 243

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         ++   L    +PE+L +D  + C  C  +  + K++++     V  
Sbjct: 244 --------------SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLV 289

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF   S  K +++V    ++P  LD+ PY S          +  P           
Sbjct: 290 LVLKRFTPVSGAKRAQEV----RYPQCLDLQPYTSE--------RKAGPLG--------- 328

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H+G   + GHY  Y+R  N +WYK DDA +T  +E    +   Y++FY
Sbjct: 329 ----YVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384

Query: 557 VQK 559
            ++
Sbjct: 385 ARE 387


>gi|359321516|ref|XP_853986.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Canis lupus familiaris]
          Length = 573

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 185/426 (43%), Gaps = 82/426 (19%)

Query: 150 SSKPENLRKRRRIDYRPWSPDLRERSLMVNN--ASPIDSMSSSNGDLP--------RGLR 199
           S KP++   RR        P + ER+   +   +SP D ++ ++  LP        + L 
Sbjct: 17  SPKPQSYWSRRGGAEVHGGPSVPERTSPASKTLSSPTDPLAPASAGLPPTKTPLSWKSLS 76

Query: 200 ----GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
               GL N+GNTC++N+ LQ L +T PL +Y LS +H    C+ +     C+ C L T  
Sbjct: 77  QVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTT-CRRQTS---CMLCTLQTHL 132

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
             + C       P + L       +    ++Q+DAHE+ + +LD + +    +      +
Sbjct: 133 MRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPE 186

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D  +  ++F G  RS + C+ C   S+T +P +D SLD+                  
Sbjct: 187 CPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDI------------------ 228

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                D  + SQ          L++  +PE L  +  + C +C  +  + K +++   P 
Sbjct: 229 ----GDAHSVSQ---------ALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPK 275

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    ++RF   +  KM+++V    Q+P  LDM  YLS          R  P        
Sbjct: 276 VLILVLRRFSDLTGNKMTKEV----QYPERLDMQHYLSE--------QRAGPL------- 316

Query: 496 LNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ H G+   +GHY  +++  N +WYK DDA ++  +         Y+
Sbjct: 317 ------VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYV 370

Query: 554 MFYVQK 559
           +FY+QK
Sbjct: 371 LFYMQK 376


>gi|222640740|gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japonica Group]
          Length = 897

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 64/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGN+C+ N+VLQ L  T PL +Y L   H++  C  K     C  C+ + +     
Sbjct: 370 GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKN-CSKK---EWCFMCEFEKLVGEGR 425

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-NG 318
            G ++  SP   L       S+    +Q+DAHEF    +D +     K+  K  +   + 
Sbjct: 426 QG-KIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHE 484

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           +  +   +F G LRS + C  C  TS   +  +D +++++ +                  
Sbjct: 485 ETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGD------------------ 526

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       IS+L G L+RFT  E L  D K+ C +C+  + + K+++I + P V  
Sbjct: 527 ------------ISSLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLT 574

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KR++         K+++ ++FP +L++  Y+S                       ++
Sbjct: 575 IALKRYQSGKF----GKINKAIRFPETLNLQRYMSPKA--------------------DD 610

Query: 499 PSSEFELFAVVTHTGKLDA---GHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMM 554
            S  + L+AVV H   ++A   GHYV Y++ ++ KWYK DD+ +  V+   V +   YM+
Sbjct: 611 TSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYML 670

Query: 555 FYVQ 558
            Y +
Sbjct: 671 LYAR 674


>gi|74000108|ref|XP_850913.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
           isoform 1 [Canis lupus familiaris]
          Length = 373

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 169/376 (44%), Gaps = 72/376 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YF+S    +Y    +   R  +A     + 
Sbjct: 41  QGVTGLRNLGNTCYMNAILQCLCSVSPLVEYFVS---GKYITALQRDCRE-VATAFAYVM 96

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + ++ GD    SP  F  +            QQDA EF I +L+ +HE ++K  H+ RS 
Sbjct: 97  TDMWLGDSECVSPEVFRSALGSLYPAFMKKTQQDAQEFLIYVLNELHEALKK-YHRKRSH 155

Query: 316 GNGD---CC---------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             G    CC         I  ++F G L   +MC+ C   + T+            N+  
Sbjct: 156 EKGSVLRCCRKVIASESSIITQLFEGQLNYSIMCLKC--ENCTYK-----------NEVF 202

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           ++ +    S + C                +L  CL  F + + L  + +  C  C+ +QE
Sbjct: 203 TVLSLPIPSEYEC----------------SLQDCLQCFFQQDTLTWNNQIHCSFCETKQE 246

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFG 482
           +  + SI K P +  FH+KRF+   +  M RK+   + +PL+ LD+ PY+   + R    
Sbjct: 247 TAVRASISKAPKIIIFHLKRFD--ILGTMKRKLRTDIHYPLTNLDLTPYI-CPVFRKH-- 301

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITE 540
                              ++ L AVV H G LD GHY  + +  ++  WY  DD  ++E
Sbjct: 302 ------------------PKYNLCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSE 343

Query: 541 VNENTVRAAQGYMMFY 556
           + + +V+ A  Y++FY
Sbjct: 344 IPDTSVQTATAYLLFY 359


>gi|115476910|ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group]
 gi|42407867|dbj|BAD09009.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
 gi|113624020|dbj|BAF23965.1| Os08g0478500 [Oryza sativa Japonica Group]
          Length = 978

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 64/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGN+C+ N+VLQ L  T PL +Y L   H++  C  K     C  C+ + +     
Sbjct: 451 GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKN-CSKKE---WCFMCEFEKLVGEGR 506

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-NG 318
            G ++  SP   L       S+    +Q+DAHEF    +D +     K+  K  +   + 
Sbjct: 507 QG-KIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHE 565

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           +  +   +F G LRS + C  C  TS   +  +D +++++ +                  
Sbjct: 566 ETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGD------------------ 607

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                       IS+L G L+RFT  E L  D K+ C +C+  + + K+++I + P V  
Sbjct: 608 ------------ISSLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLT 655

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KR++         K+++ ++FP +L++  Y+S                       ++
Sbjct: 656 IALKRYQSGKF----GKINKAIRFPETLNLQRYMSPKA--------------------DD 691

Query: 499 PSSEFELFAVVTHTGKLDA---GHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMM 554
            S  + L+AVV H   ++A   GHYV Y++ ++ KWYK DD+ +  V+   V +   YM+
Sbjct: 692 TSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYML 751

Query: 555 FYVQ 558
            Y +
Sbjct: 752 LYAR 755


>gi|311266703|ref|XP_003131212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sus scrofa]
          Length = 1140

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+NS +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 119 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHTRGCHQGS----FCMLCVMQNHIVQAF 174

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 175 ANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQAT 234

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                 + N  
Sbjct: 235 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR---------------QAAN-- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                         ++  L+ F +P+ L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 --------------IVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 322

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K++++V     +P  L++ PY+S S                     N  
Sbjct: 323 SLKRFANFSGGKITKEVG----YPEFLNIRPYMSQS---------------------NGE 357

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++  S +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 358 PVLYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHASNIKVVLNQQAYVLFYL 417

Query: 558 Q 558
           +
Sbjct: 418 R 418


>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
          Length = 959

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDP------- 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 -VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
          Length = 963

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDP------- 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 -VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|339245907|ref|XP_003374587.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
 gi|316972184|gb|EFV55872.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
          Length = 918

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 68/366 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCFMNSVLQ L +TPP+ NY  S  H R  C   NG   C  C L +    +F
Sbjct: 168 GLQNLGNTCFMNSVLQVLTNTPPMANYLTSGEHGRQLCPGTNG--FCAICALRSHVKRVF 225

Query: 260 CGDRM---PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
              +     +SP            + +   Q+DAHEF    +D + +      ++ R+  
Sbjct: 226 AAAKSNSGSFSPTHIAQHIRCVMKSHSHGRQEDAHEFLRYFVDAM-QNAALFPYRGRNLD 284

Query: 317 --NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
               +  I  R+F G  RS ++C  C + S  +DP +D SL+++                
Sbjct: 285 IFTQETSIISRIFGGFHRSQIVCNNCQYVSVIYDPFLDLSLEIK---------------- 328

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                            +T+   +  +T+ E L +D  + C +C+ R  + K ++I   P
Sbjct: 329 ---------------QWNTVEHAMAHYTKMETLSNDDAYNCPRCKRRVSARKILTIHSAP 373

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V   H+KRF+H        K+DR++ +   +++ P+++                     
Sbjct: 374 NVLTIHLKRFDHFG------KIDRHIGYSDRMNLRPFMTEK------------------- 408

Query: 495 TLNEPSSEFELFAVVTHTGK-LDAGHYVTYL-RLSNKWYKCDDAWITEVNENTVRAAQGY 552
               P   + L+ VV H G+  ++GHY  ++     +W+  DD+ +  V+  +   A  Y
Sbjct: 409 --QGPPVNYRLYGVVIHNGRSTNSGHYYAFVCNPLGQWHLMDDSRVCPVSSESALKASAY 466

Query: 553 MMFYVQ 558
           ++FYV+
Sbjct: 467 VLFYVR 472


>gi|428170656|gb|EKX39579.1| hypothetical protein GUITHDRAFT_89035 [Guillardia theta CCMP2712]
          Length = 406

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 173/400 (43%), Gaps = 96/400 (24%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +GL GL NLGNTC++N+ +Q L HTP    +F+        C         +   L+   
Sbjct: 55  KGLSGLPNLGNTCYLNAPVQVLVHTPSFAGFFVD-------CAD------FIPPRLEVGN 101

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLAS-----------------YEQQDAHEFFISML 298
           S      RM +S A  +Y  W     +AS                   QQDA EF    L
Sbjct: 102 SRAITQRRMVHSLADIVYQVWDEGLKVASPHNFVRDVLDLNPDYRGLGQQDAQEFLRRTL 161

Query: 299 DGIHEKVEKDQHKPRSQGNGDC--------------CIAHRVFSGILRSDVMCMACGFTS 344
           D +HE++++    P + GN +                I   +F+G+L S+V C  CG  S
Sbjct: 162 DVLHEELQESTPSPEN-GNAESKSKETHRHEKRLHNSIVLDIFAGVLISEVKCNHCGKVS 220

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
            T +P +D S+ + P++ +  +  S   N+  +                   CL ++  P
Sbjct: 221 VTEEPVLDQSISI-PSKKARQRLLSAHKNYRAS------------------DCLLQYYEP 261

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSV--RKMSRKVDRYLQF 462
           E L  + K+ C+ C   ++  K++S+ K P V   H+KRF + S+    M  K+  ++QF
Sbjct: 262 EHLTGNDKYKCEHCDQFRDCTKKLSLLKPPEVLTLHLKRFRYESLFGNNMGTKISEHIQF 321

Query: 463 PL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           P+  LDM P++  + +                         ++L AV+ H G L  GHY+
Sbjct: 322 PIKGLDMRPFIKENAI-------------------------YDLLAVIEHRGALHGGHYI 356

Query: 522 TYLRLSN--KWYKCDDAWITEVNENTV--RAAQGYMMFYV 557
            Y+R ++  KW++ +D+ +  ++   V  R    Y  F++
Sbjct: 357 AYIRNNSDGKWFEFNDSQVNTISGADVSCRNILNYSHFHL 396


>gi|12854228|dbj|BAB29966.1| unnamed protein product [Mus musculus]
          Length = 390

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 165/375 (44%), Gaps = 70/375 (18%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     +  + V    A     + 
Sbjct: 42  QGVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDCSEVTTAFA----YLM 97

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD-QHKPRS 314
           + ++ GD    SP  FL +            QQDA EF I +L+ +HE ++K  + +   
Sbjct: 98  TDMWLGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRVNE 157

Query: 315 QGNGDCC----------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
           +  G  C          I  R+F G L   + C+ C       + C         N+  +
Sbjct: 158 KRTGQSCCRKVPAQEISIITRLFEGQLSYSITCLKC-------ESCT------HKNEVFT 204

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
           + +    S++ C                +L  CL  F + + L    + +C  C+++QE+
Sbjct: 205 ILSLPIPSDYEC----------------SLQDCLQCFFQQDTLTWSNQIYCSFCEIKQEA 248

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGN 483
             + +I K+P +  FH KRF+     K  RK+   + +PL+ LD+ PY+     +    N
Sbjct: 249 AVRTTISKVPKIIVFHFKRFDIQGTVK--RKLRTDIHYPLTNLDLTPYICPVFRKHPMYN 306

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEV 541
                                L AVV H G LD GHY  + +  ++  WY  DD  ++E+
Sbjct: 307 ---------------------LCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSEI 345

Query: 542 NENTVRAAQGYMMFY 556
            + +V+ A  Y++FY
Sbjct: 346 PDTSVQTATAYLLFY 360


>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
 gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
          Length = 756

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 158/372 (42%), Gaps = 74/372 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQ--SKNGVRLCLACDLDTMFSA 257
           GL+N GNTC+MNSV+Q+L HTPPL    L+   +  + +   K  V       + T    
Sbjct: 201 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNVAFDAVAAMQTFAKG 260

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE-------KVEKDQH 310
              G +   +P  F  +    A  L    Q+DAHE+   +L+ + +       K  K   
Sbjct: 261 SLMGSKPTNAPRDFNRNLKAFARPLRQGRQEDAHEYLRFLLEALQQGCLSRASKSLKPDD 320

Query: 311 KPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSST 370
             R+          ++F G LRS V C  CG  S TFDP +D SLD+             
Sbjct: 321 PIRA-----TSFVQKIFGGKLRSRVTCHKCGHNSDTFDPFMDLSLDVR------------ 363

Query: 371 KSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSI 430
                              GI++L      F   ++L   +K+ C +C+ + ++ KQ +I
Sbjct: 364 ------------------KGINSLTDAFRAFVAKDQLTGSEKYKCDKCKRKVDATKQFTI 405

Query: 431 RKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDG 490
              P     H+KRF          K+ R + F   L++APYLS                 
Sbjct: 406 ETAPPALTVHLKRFS-----PFGGKISRQVAFDEKLNIAPYLS----------------- 443

Query: 491 DESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRA 548
                +N     ++L+AVV H G   ++GHYV  +R    KW + DD+ ++E+  +    
Sbjct: 444 -----VNHGPVRYKLYAVVHHYGSGPNSGHYVASVRSPFGKWTRMDDSHVSEMGSSGPLG 498

Query: 549 AQ-GYMMFYVQK 559
            Q  Y++FY+++
Sbjct: 499 DQSAYILFYLKE 510


>gi|118366697|ref|XP_001016564.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila]
 gi|89298331|gb|EAR96319.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila SB210]
          Length = 751

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 169/382 (44%), Gaps = 88/382 (23%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA-----CDL 251
           G+RGL+N  N C++N+ +Q L   P L +YFLS+ + R       G R  L       D+
Sbjct: 419 GVRGLHNQSNYCYLNASVQCLLSIPELNSYFLSEEYRR--VVKIQGTRKALKIVPVYADM 476

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV------ 305
             ++      + +  +  K +            +EQ DA EF   +L  I +++      
Sbjct: 477 IKLYEKTSENNILDMNLLKKVI-----KKPFIPHEQHDAQEFIRYILSEIQDELNPILPS 531

Query: 306 ----------EKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
                     E  Q+  R Q      I   +FSG L S+V C  CG+ S T+DP +D SL
Sbjct: 532 KNPTQFKDSEEAYQYYLRFQN----SIIDYIFSGQLSSNVNCSKCGYISRTYDPFLDLSL 587

Query: 356 DLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFC 415
                                     GM+S      +++  CL++F   E L  D K  C
Sbjct: 588 --------------------------GMDSK----TTSVQDCLNKFFSEEILSDDYK--C 615

Query: 416 QQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSS 474
           ++C    ++ KQ+ I K P +   H+KRF+   +    RK+  ++++P+ +L +  Y+ +
Sbjct: 616 EKCNQNNKAKKQVLISKTPYILTLHLKRFK---IYPKKRKITDFIKYPIQNLSIKQYVKN 672

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCD 534
           S   S  G  ++                  L  ++ H+G  D+GHY++Y++  N+W+ CD
Sbjct: 673 S---STSGGYYY-----------------NLIGIIVHSGSQDSGHYISYVKRENRWFCCD 712

Query: 535 DAWITEVNENTVRAAQGYMMFY 556
           D    EV+E TV   + Y++FY
Sbjct: 713 DGKYQEVSEKTVIKQEVYLLFY 734


>gi|224081136|ref|XP_002306306.1| predicted protein [Populus trichocarpa]
 gi|222855755|gb|EEE93302.1| predicted protein [Populus trichocarpa]
          Length = 370

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 173/405 (42%), Gaps = 97/405 (23%)

Query: 192 GD-LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHN-RYYCQSKNGVRLCL 247
           GD  P G R  GL N GNTC+ NSVLQAL+   P R + L    N +    ++  +  CL
Sbjct: 13  GDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREHLLEYYGNGKSIGDAEENLLTCL 72

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
           A DL T  S+      +  +P +F+    +      SY  QDAHEF   +L+ + + +EK
Sbjct: 73  A-DLFTQISSQKKKTGV-IAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEK 130

Query: 308 DQHKPRS------------------QGNGD-----CCIAHRVFSGILRSDVMCMACGFTS 344
           +    +S                  Q NG          H+ F GIL ++  C+ C   +
Sbjct: 131 EAQAVKSDPETSSPPEKIANGPKHAQANGVSKEPLVTWVHKNFQGILTNETRCLQCETVT 190

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
              +   D SLD+E N                               S++  CL  F+  
Sbjct: 191 ARDETFFDLSLDIEQN-------------------------------SSITSCLKNFSST 219

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   + FPL
Sbjct: 220 ETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPL 279

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTY 523
            L +                        SNT+ +   E+ LFAVV H G   + GHYV+ 
Sbjct: 280 ELKL------------------------SNTVEDADIEYSLFAVVVHVGSGPNHGHYVSL 315

Query: 524 LRLSNKWYKCDDAWITEVNENTVR----AAQ--------GYMMFY 556
           ++  N W   DD  +  ++E+ V+    +AQ        GY++FY
Sbjct: 316 VKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 360


>gi|260166690|ref|NP_083439.2| putative ubiquitin carboxyl-terminal hydrolase 50 [Mus musculus]
 gi|81892336|sp|Q6P8X6.1|UBP50_MOUSE RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 50;
           AltName: Full=Deubiquitinating enzyme 50; AltName:
           Full=Ubiquitin thioesterase 50; AltName:
           Full=Ubiquitin-specific-processing protease 50
 gi|38174591|gb|AAH61020.1| Ubiquitin specific peptidase 50 [Mus musculus]
 gi|148696219|gb|EDL28166.1| ubiquitin specific peptidase 50, isoform CRA_a [Mus musculus]
          Length = 390

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 165/375 (44%), Gaps = 70/375 (18%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     +  + V    A     + 
Sbjct: 42  QGVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDCSEVTTAFA----YLM 97

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD-QHKPRS 314
           + ++ GD    SP  FL +            QQDA EF I +L+ +HE ++K  + +   
Sbjct: 98  TDMWLGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRVNE 157

Query: 315 QGNGDCC----------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
           +  G  C          I  R+F G L   + C+ C       + C         N+  +
Sbjct: 158 KRTGQSCCRKVPAQETSIITRLFEGQLSYSITCLKC-------ESCT------HKNEVFT 204

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
           + +    S++ C                +L  CL  F + + L    + +C  C+++QE+
Sbjct: 205 ILSLPIPSDYEC----------------SLQDCLQCFFQQDTLTWSNQIYCSFCEIKQEA 248

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGN 483
             + +I K+P +  FH KRF+     K  RK+   + +PL+ LD+ PY+     +    N
Sbjct: 249 AVRTTISKVPKIIVFHFKRFDIQGTVK--RKLRTDIHYPLTNLDLTPYICPVFRKHPMYN 306

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEV 541
                                L AVV H G LD GHY  + +  ++  WY  DD  ++E+
Sbjct: 307 ---------------------LCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSEI 345

Query: 542 NENTVRAAQGYMMFY 556
            + +V+ A  Y++FY
Sbjct: 346 PDTSVQTATAYLLFY 360


>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
           mutus]
          Length = 468

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 162/363 (44%), Gaps = 71/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+ LQ L HTPPL ++ +S +H    C +++   LC A       + + 
Sbjct: 28  GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHA-TLCPARSACTLC-AMRAHVTRALLH 85

Query: 260 CGDRMPYSPAK-FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
            G+ +   P K  L  + RH       +Q+DAHEF +  L+ + +       +P    + 
Sbjct: 86  AGEVI--RPRKDLLAGFHRH-------QQEDAHEFLMFTLNAMQQGC-LSASQPSGHASE 135

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D  I  ++F G  RS + C+ C   S TFDP +D SLD+   Q                 
Sbjct: 136 DTTIIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ----------------- 178

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         ++   L    +PE+L +D  + C  C  +  + K++++     V  
Sbjct: 179 --------------SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLALHSTSQVLV 224

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF   S  K +++V    ++P  LD+ PY S          +  P           
Sbjct: 225 LVLKRFTPVSGAKRAQEV----RYPQCLDLQPYTSE--------RKAGPLG--------- 263

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H+G   + GHY  Y+R  N +WYK DDA +T  +E    +   Y++FY
Sbjct: 264 ----YVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 319

Query: 557 VQK 559
            ++
Sbjct: 320 ARE 322


>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
          Length = 533

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 71/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+ LQ L HTPPL ++ +S +H    C +++   LC A       + + 
Sbjct: 93  GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHA-TLCPARSACTLC-AMRAHVTRALLH 150

Query: 260 CGDRMPYSPAK-FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
            G+ +   P K  L  + RH       +Q+DAHEF +  L+ + +       +P    + 
Sbjct: 151 AGEVI--RPRKDLLAGFHRH-------QQEDAHEFLMFTLNAMQQGC-LSASQPSGHASE 200

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D  +  ++F G  RS + C+ C   S TFDP +D SLD+   Q                 
Sbjct: 201 DTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ----------------- 243

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         ++   L    +PE+L +D  + C  C  +  + K++++     V  
Sbjct: 244 --------------SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLV 289

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF   S  K +++V    ++P  LD+ PY S          +  P           
Sbjct: 290 LVLKRFTPVSGAKRAQEV----RYPQCLDLQPYTSE--------RKAGPLG--------- 328

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H+G   + GHY  Y+R  N +WYK DDA +T  +E    +   Y++FY
Sbjct: 329 ----YVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384

Query: 557 VQK 559
            ++
Sbjct: 385 ARE 387


>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
          Length = 1075

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGD-------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|356497712|ref|XP_003517703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
           max]
          Length = 927

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 164/363 (45%), Gaps = 65/363 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GN+C+ N+VLQ L +T PL +Y     H++  CQ K     C  C+ + +     
Sbjct: 413 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKR-CQKKG---WCFTCEFEYLIQKAK 468

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            G   P SP   L    +  S+L   +++DAHEF    +D +     K+           
Sbjct: 469 EGIS-PLSPIGILSKIHKIGSHLGRGKEEDAHEFLRCAVDTMQSVCLKEVGVSSPLAEET 527

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + +  F G LRS + C+ C   S  ++  +D +++++ +                   
Sbjct: 528 TLVGY-TFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGD------------------- 567

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      I TL   L +FT PE L  D K+ C +C+  +++ K++++ + P +   
Sbjct: 568 -----------IGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTI 616

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF+  +  K+++ V    QFP  L+MAPY+S +                      + 
Sbjct: 617 VLKRFQSGNFEKLNKSV----QFPEVLNMAPYMSGT---------------------KDK 651

Query: 500 SSEFELFAVVTHTGKLDA---GHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGYMMF 555
           S  + L+AVV H   ++A   GHYV Y++ +  +W++ DD+ +  V  + V + + YM+ 
Sbjct: 652 SPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLL 711

Query: 556 YVQ 558
           Y +
Sbjct: 712 YAR 714


>gi|326427127|gb|EGD72697.1| hypothetical protein PTSG_04426 [Salpingoeca sp. ATCC 50818]
          Length = 1574

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 160/378 (42%), Gaps = 70/378 (18%)

Query: 200  GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRH-NRYYCQSKNGVRLCLACDLDTMFSAI 258
            GL NLGNTC+MN+VLQ L HT  L  YF+  R+ N    +SK G +  +A +L  + + +
Sbjct: 1241 GLKNLGNTCYMNAVLQCLAHTKQLATYFVQKRYRNHLNRRSKFGCKGEVAEELAELLTVL 1300

Query: 259  FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ--- 315
                    SP+ F   +  +    A Y+QQD  EF   +LD +HE + +   KP ++   
Sbjct: 1301 TSRQYRHLSPSMFKEVFASYCPQFAGYDQQDCQEFASMLLDKLHEDLNRVVAKPPAKDLD 1360

Query: 316  ---------GNG--------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
                     GN         D  I   +F G  RS   C  C + S T+ P    SL + 
Sbjct: 1361 LSGMDAVRAGNEAWKQCIARDNSIITDLFQGQFRSVTRCNTCRYESATYSPFTSLSLPVP 1420

Query: 359  PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
            P+                             G  +L  C+  F+R E +  + ++ C +C
Sbjct: 1421 PH-----------------------------GRYSLHHCIRLFSRQENMTGNNQWKCPKC 1451

Query: 419  QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
            +  ++++K M I +LP     H+KRF  +       K++  + FP +L +          
Sbjct: 1452 KAYRDAIKFMGIWRLPRCLLIHLKRFYFNG--PFRDKINTMIDFPQNLQLG--------- 1500

Query: 479  SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWI 538
                      D   S +  E    + L+AV  H G L  GHY+ + + + +W K DD+ +
Sbjct: 1501 ---------KDDVMSFSRPEQRENYSLYAVANHYGTLTGGHYIAFAKHAGRWEKYDDSVV 1551

Query: 539  TEVNENTVRAAQGYMMFY 556
            + +    V     Y++FY
Sbjct: 1552 SPMAPQQVVTPAAYVLFY 1569


>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
           latipes]
          Length = 667

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 162/374 (43%), Gaps = 79/374 (21%)

Query: 208 CFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYS 267
           CFMNS+LQ L +T  LR+Y L + H R    + +     L  +   +   ++        
Sbjct: 340 CFMNSILQCLSNTQSLRDYCLHNLHRRD-LNNNSRTNTALMEEFAKLIQTLWTSSSSEAV 398

Query: 268 PA-KFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG-------- 318
              +F     R+A     Y QQDA EF   +LDG+H +V +   +PR             
Sbjct: 399 SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVSVRPRGTAEDFDHLQDEE 458

Query: 319 -------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
                        D  I   +F G L+S + C  CGF ST FDP  D SL +        
Sbjct: 459 KGKKMWSKYVEREDSKIVD-LFVGQLKSSLTCSHCGFCSTVFDPFWDLSLPI-------- 509

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                              S ++ G  +LM C+  FT+ + L  D+K  C +C+ R+   
Sbjct: 510 -------------------SKKSYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCT 550

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNR 484
           K+  I+K P +   H+KRF  S  R+ S K+  ++ FPL  LD+  + S           
Sbjct: 551 KKFRIQKFPKILVLHLKRF--SEARRTS-KLSTFVNFPLKDLDLREFAS----------- 596

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN--KWYKCDDAWITEVN 542
                G+ +N +      + L+AV  H+G    GHY  Y R  N  +WY  +D+ +T ++
Sbjct: 597 -----GNSTNAM------YNLYAVSNHSGTTMGGHYTAYCRNPNSGEWYTFNDSRVTPMS 645

Query: 543 ENTVRAAQGYMMFY 556
            + VR++  Y++FY
Sbjct: 646 SSQVRSSDAYVLFY 659


>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
           alecto]
          Length = 492

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 167/383 (43%), Gaps = 72/383 (18%)

Query: 180 NASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQS 239
            A   +++    G L  G  GL NLGNTC+ N+ LQ L +T PL    LS RH    CQ 
Sbjct: 26  GAGDAEALGGRRGPLAVGA-GLRNLGNTCYANAALQCLTYTAPLARCLLSRRHAE-ACQR 83

Query: 240 KNGVRLCLACDLDTMFS-AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISML 298
                 C+ C +    + A  C   +       +  + RH       +Q+DAHEF +  +
Sbjct: 84  PAS---CVLCAMRAHVARARRCRGEVIQPATGLIAGFHRH-------KQEDAHEFLMFTV 133

Query: 299 DGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
           D + +   ++  + R +  GD     R+F G  RS V C+ C   S T DP +D +LD++
Sbjct: 134 DAMQQACLREPER-RGRRCGDSTPIRRIFGGYWRSQVKCLRCHGVSDTLDPYLDITLDIQ 192

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
             Q                               ++   L+   +PE+L  D  + C  C
Sbjct: 193 AAQ-------------------------------SVTQALELLVKPEKLDGDNSYHCGVC 221

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILR 478
             +  + K +++     V    +KRF   +  K++++V    Q+P  LDM  YLS     
Sbjct: 222 LEKVPASKTLTLHAPSEVLILVLKRFSDFTGSKLAKEV----QYPEHLDMRQYLSQQ--- 274

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDA 536
                        ++  L     E+EL+AV+ H G    +GHY  Y++  N +W+K DDA
Sbjct: 275 -------------DAGPL-----EYELYAVLVHAGGTCRSGHYFCYIKAGNGQWFKMDDA 316

Query: 537 WITEVNENTVRAAQGYMMFYVQK 559
            +T  + ++  +   Y++FY+QK
Sbjct: 317 KVTACDVSSALSQDAYVLFYIQK 339


>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 36 [Callithrix jacchus]
          Length = 1124

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 157/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 122 GLHNLGNTCFFNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 177

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 178 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 236

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 237 TTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDIALEIR--------------------- 275

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 276 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 325

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L+M PY+S +             +GD        
Sbjct: 326 SLKRFANFSGGKITKDVG----YPEFLNMRPYMSQN-------------NGDP------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 -VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 420

Query: 558 Q 558
           +
Sbjct: 421 R 421


>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
           troglodytes]
          Length = 1037

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDP------- 362

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 363 -VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
           rotundata]
          Length = 354

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 161/381 (42%), Gaps = 81/381 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C  D  +S   
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTCLADLFYSIAT 79

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKPRSQ- 315
              ++   +P KF+    +      +Y QQDAHEF   +++ I+E +  E++Q KP    
Sbjct: 80  QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSKPAGGK 139

Query: 316 -GNGDC------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
            G GD          H +F GIL S+  C+ C   S+  +   D  +D++ N        
Sbjct: 140 CGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN-------- 191

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  +++  CL  F+  E L SD KF C  C   QE+ K+M
Sbjct: 192 -----------------------TSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRM 228

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            ++KLP++   H+KRF++        KV   + FPL L                 R F  
Sbjct: 229 RVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFNT 271

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
             D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+ 
Sbjct: 272 SDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIE 327

Query: 548 ------------AAQGYMMFY 556
                       +  GY++FY
Sbjct: 328 DFYGLTSDIQKSSETGYILFY 348


>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
          Length = 1123

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 125 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 180

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 181 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 239

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 240 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 278

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 279 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 328

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 329 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGD-------- 363

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 364 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 423

Query: 558 Q 558
           +
Sbjct: 424 R 424


>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
 gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
 gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
 gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
          Length = 1123

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
           Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
           thioesterase 36; AltName:
           Full=Ubiquitin-specific-processing protease 36
          Length = 1121

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
          Length = 1121

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGD-------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
          Length = 1123

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Bos taurus]
          Length = 533

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 71/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+ LQ L HTPPL ++ +S +H    C +++   LC A       + + 
Sbjct: 93  GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHA-TLCPARSACTLC-AMRAHVTRALLH 150

Query: 260 CGDRMPYSPAK-FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
            G+ +   P K  L  + RH       +Q+DAHEF +  L+ + +       +P    + 
Sbjct: 151 AGEVI--RPRKDLLAGFHRH-------QQEDAHEFLMFTLNAMQQGC-LSASQPSGHASE 200

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D  +  ++F G  RS + C+ C   S TFDP +D SLD+   Q                 
Sbjct: 201 DTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ----------------- 243

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         ++   L    +PE+L +D  + C  C  +  + K++++     V  
Sbjct: 244 --------------SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLV 289

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF   S  K +++V    ++P  LD+ PY S          +  P           
Sbjct: 290 LVLKRFTPVSGAKRAQEV----RYPQCLDLQPYTSE--------RKAGPLG--------- 328

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H+G   + GHY  Y+R  N +WYK DDA +T  +E    +   Y++FY
Sbjct: 329 ----YVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384

Query: 557 VQK 559
            ++
Sbjct: 385 ARE 387


>gi|395518062|ref|XP_003763186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-B-like, partial
           [Sarcophilus harrisii]
          Length = 140

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 93/144 (64%), Gaps = 5/144 (3%)

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSA 257
           LRGL NLGNTCFMN ++QAL HTP LR++FLSDRH    C+ ++    CL C++ T+F  
Sbjct: 1   LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK---CEMQSPSS-CLVCEMSTLFQE 56

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
            + G R P+ P + L+  W HA +LA YEQQDAHEF I+ LD +H   + D +  ++   
Sbjct: 57  FYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP 116

Query: 318 GDC-CIAHRVFSGILRSDVMCMAC 340
             C CI  ++F+G L+SDV C  C
Sbjct: 117 NHCNCIIDQIFTGGLQSDVTCQVC 140


>gi|119924425|ref|XP_001250435.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Bos taurus]
          Length = 533

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 71/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+ LQ L HTPPL ++ +S +H    C +++   LC A       + + 
Sbjct: 93  GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHA-TLCPARSACTLC-AMRAHVTRALLH 150

Query: 260 CGDRMPYSPAK-FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
            G+ +   P K  L  + RH       +Q+DAHEF +  L+ + +       +P    + 
Sbjct: 151 AGEVI--RPRKDLLAGFHRH-------QQEDAHEFLMFTLNAMQQGC-LSASQPSGHASE 200

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D  +  ++F G  RS + C+ C   S TFDP +D SLD+   Q                 
Sbjct: 201 DTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ----------------- 243

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         ++   L    +PE+L +D  + C  C  +  + K++++     V  
Sbjct: 244 --------------SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLV 289

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF   S  K +++V    ++P  LD+ PY S          +  P           
Sbjct: 290 LVLKRFTPVSGAKRAQEV----RYPQCLDLQPYTSE--------RKAGPLG--------- 328

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H+G   + GHY  Y+R  N +WYK DDA +T  +E    +   Y++FY
Sbjct: 329 ----YVLYAVLVHSGWSCERGHYFYYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384

Query: 557 VQK 559
            ++
Sbjct: 385 ARE 387


>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 36 [Pan paniscus]
          Length = 1122

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
           taurus]
          Length = 558

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 71/363 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTC++N+ LQ L HTPPL ++ +S +H    C +++   LC A       + + 
Sbjct: 118 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHA-TLCPARSACTLC-AMRAHVTRALLH 175

Query: 260 CGDRMPYSPAK-FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
            G+ +   P K  L  + RH       +Q+DAHEF +  L+ + +       +P    + 
Sbjct: 176 AGEVI--RPRKDLLAGFHRH-------QQEDAHEFLMFTLNAMQQGC-LSASQPSGHASE 225

Query: 319 DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNC 378
           D  +  ++F G  RS + C+ C   S TFDP +D SLD+   Q                 
Sbjct: 226 DTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ----------------- 268

Query: 379 EADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSC 438
                         ++   L    +PE+L +D  + C  C  +  + K++++     V  
Sbjct: 269 --------------SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLV 314

Query: 439 FHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNE 498
             +KRF   S  K +++V    ++P  LD+ PY S          +  P           
Sbjct: 315 LVLKRFTPVSGAKRAQEV----RYPQCLDLQPYTSE--------RKAGPLG--------- 353

Query: 499 PSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFY 556
               + L+AV+ H+G   + GHY  Y+R  N +WYK DDA +T  +E    +   Y++FY
Sbjct: 354 ----YVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 409

Query: 557 VQK 559
            ++
Sbjct: 410 ARE 412


>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
 gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
 gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
 gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
          Length = 1123

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|348521632|ref|XP_003448330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
           [Oreochromis niloticus]
          Length = 404

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 170/395 (43%), Gaps = 91/395 (23%)

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFL--SDRHNRYYCQSKNGVRLCLACDL 251
           L  G  GL N+GNTCF+N+V+Q L HT  LR+Y L  S +H ++   SK   +L  A   
Sbjct: 58  LGSGRTGLRNIGNTCFLNAVVQCLSHTCGLRDYCLLKSYKHEKF---SKEEAKLMEA--- 111

Query: 252 DTMFSAIFCG------DRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
              FS +  G           +P +F   +       + Y QQDA EF   +LD +H ++
Sbjct: 112 ---FSKVLSGLWGVNEGETVVNPRQFYNVFTEAVPYFSGYSQQDAQEFLRFLLDKLHTEI 168

Query: 306 -----------EKDQHKPRSQGNGDCCIAHR------------VFSGILRSDVMCMACGF 342
                      E +Q   R + + +  +  +            +FSG LRS + C  C  
Sbjct: 169 NRRPYIRRTGKEPEQKFARFRISEEAAVMWKKHLERDDSIIVDLFSGQLRSSLHCSVCSH 228

Query: 343 TSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFT 402
            S TFD   D SL + P + SS                         G  TL  CLD F+
Sbjct: 229 YSNTFDVFCDLSLPI-PKRSSS-------------------------GEVTLRECLDLFS 262

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           + E+L  +    C++C  R E  K++SI++ P V   H+ RF  S  R    K   Y+ F
Sbjct: 263 QEEKLDKENSPMCERCNRRTECTKRLSIQRFPQVIVIHLNRFTTS--RWSISKSTVYVSF 320

Query: 463 PLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYV 521
           PL+ LD+ PY               P D          S  ++L+A+  H G ++ GHY 
Sbjct: 321 PLTNLDLGPY--------------GPVDCG--------SVLYDLYAICNHAGTVNMGHYT 358

Query: 522 TYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
                 N W   +D+ +T + EN ++  Q Y++FY
Sbjct: 359 ACCLDENGWCFYNDSSVTPLTENQLQTNQAYVLFY 393


>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 690

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 70/369 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLS-DRHNRYYCQSKNGVRLCLACDLDTMFSAI 258
           G  N GNTCF+N+ LQAL HTP L    +  D H+   C      + C  C +  + +  
Sbjct: 181 GFYNTGNTCFLNATLQALVHTPALAIGLMDRDEHSPESCDLARAKKFCALCRMYRLVN-- 238

Query: 259 FCGDRMPYS-----PAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR 313
            C D+  Y      P+    +  + A  +    Q+DAHEF   +++ +     + + +  
Sbjct: 239 MCFDKASYGSHAIEPSPINRALSKFAPTMRGGRQEDAHEFLRLLVEAMQNGALQGRAEKA 298

Query: 314 SQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSN 373
            Q   +    HR+F G LRS V+C  C   S TFD  +D SLD+                
Sbjct: 299 KQKQKESTFVHRMFGGKLRSRVVCEHCNTPSDTFDNFLDLSLDI---------------- 342

Query: 374 HSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKL 433
                       SQ   +S+ +    +F   +RL    ++ C +C+  +++ K MS+   
Sbjct: 343 ------------SQANSVSSALKAYHKF---DRLRGANQYKCDKCKCLRDAKKSMSVFSA 387

Query: 434 PLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDES 493
           P +   H+KRF         RK+++ + F  SLD+ P +S                 +ES
Sbjct: 388 PPILTLHLKRFNF-----RGRKINKRVNFEDSLDLKPAMS-----------------NES 425

Query: 494 NTLNEPSSEFELFAVVTHTGKLD-AGHYVTYLRLSN-KWYKCDDAWITEVNEN-TVRAAQ 550
           +      + ++L+AVV H G+ + +GHY  +++ SN KWY  DD+ +  ++++ TV A +
Sbjct: 426 DI-----TGYKLYAVVCHRGQSNKSGHYYAHVKASNGKWYVADDSTVESISDSRTVLANE 480

Query: 551 -GYMMFYVQ 558
             Y++FY +
Sbjct: 481 HAYILFYAR 489


>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
           gorilla gorilla]
          Length = 1123

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
          Length = 1124

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 124 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 179

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 180 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR--------------------- 277

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 278 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 327

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 328 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 365

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 366 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 422

Query: 558 Q 558
           +
Sbjct: 423 R 423


>gi|359324293|ref|XP_003640328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Canis lupus familiaris]
          Length = 535

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 184/426 (43%), Gaps = 82/426 (19%)

Query: 150 SSKPENLRKRRRIDYRPWSPDLRERSLMVNN--ASPIDSMSSSNGDLP--------RGLR 199
           S KP++   RR        P + ER+   +   +SP D ++ ++  LP        + L 
Sbjct: 17  SPKPQSYWSRRGGAEVHGGPSVPERTSPASKTLSSPTDPLAPASAGLPPTKTPLSWKSLS 76

Query: 200 ----GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
               GL N+GNTC++N+ LQ L +T PL +Y LS +H    C+ +     C+ C L    
Sbjct: 77  QVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTT-CRRQTS---CMLCTLQAHL 132

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
             + C       P + L       +    ++Q+DAHE+ + +LD + +    +      +
Sbjct: 133 MRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPE 186

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D  +  ++F G  RS + C+ C   S+T +P +D SLD+                  
Sbjct: 187 CPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDI------------------ 228

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                D  + SQ          L++  +PE L  +  + C +C  +  + K +++   P 
Sbjct: 229 ----GDAHSVSQ---------ALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPK 275

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    ++RF   +  KM+++V    Q+P  LDM  YLS          R  P        
Sbjct: 276 VLILVLRRFSDLTGNKMTKEV----QYPERLDMQHYLSE--------QRAGPL------- 316

Query: 496 LNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ H G+   +GHY  +++  N +WYK DDA ++  +         Y+
Sbjct: 317 ------VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYV 370

Query: 554 MFYVQK 559
           +FY+QK
Sbjct: 371 LFYMQK 376


>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
          Length = 353

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 160/380 (42%), Gaps = 80/380 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C  D  +S   
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTCLADLFYSIAT 79

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-EKDQHKPRSQ-- 315
              ++   +P KF+    +      +Y QQDAHEF   +++ I+E + E+ Q KP     
Sbjct: 80  QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILERTQSKPAGGKC 139

Query: 316 GNGDC------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
           G GD          H +F GIL S+  C+ C   S+  +   D  +D++ N         
Sbjct: 140 GAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN--------- 190

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                                 +++  CL  F+  E L SD KF C  C   QE+ K+M 
Sbjct: 191 ----------------------TSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMR 228

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
           ++KLP++   H+KRF++        KV   + FPL L                 R F   
Sbjct: 229 VKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFNTS 271

Query: 490 GDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR- 547
            D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+  
Sbjct: 272 DDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIED 327

Query: 548 -----------AAQGYMMFY 556
                      +  GY++FY
Sbjct: 328 FYGLTSDIQKSSETGYILFY 347


>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
          Length = 1123

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 239 TLV-HQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
           jacchus]
          Length = 1319

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 167/369 (45%), Gaps = 79/369 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL NLGNTCF N+ LQ L +TPPL NY LS  H++  C ++     C+ C +    +   
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSK-TCHAEG---FCMMCTMQAHITQAL 167

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-----EKDQHKPRS 314
                   P   +    R A +     Q+DAHEF    +D + +       + D+H   +
Sbjct: 168 SNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH---T 224

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
           Q     C   ++F G LRS V C+ C   S TFDP +D +L+++  Q             
Sbjct: 225 QATTLVC---QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ------------- 268

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                             ++   L++F +PE+L  +  + C +C+    + K+ +I +  
Sbjct: 269 ------------------SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSS 310

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            V    +KRF + +  K+++ V    ++P  LD+ PY+S                     
Sbjct: 311 NVLTLSLKRFANFTGGKIAKDV----KYPEYLDIRPYMS--------------------- 345

Query: 495 TLNEPSSE---FELFAVVTHTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAA 549
              +P+ E   + L+AV+ HTG    AGHY  Y++  N  WY+ +D+ ++  +  +V + 
Sbjct: 346 ---QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKAINGLWYQMNDSIVSTSDIRSVLSQ 402

Query: 550 QGYMMFYVQ 558
           Q Y++FY++
Sbjct: 403 QAYVLFYIK 411


>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
           terrestris]
          Length = 354

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 160/381 (41%), Gaps = 81/381 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C  D  +S   
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTCLADLFYSIAT 79

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKPRSQ- 315
              ++   +P KF+    +      +Y QQDAHEF   +++ I+E +  E+ Q KP    
Sbjct: 80  QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERSQSKPTGGK 139

Query: 316 -GNGDC------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
            G GD          H +F GIL S+  C+ C   S+  +   D  +D++ N        
Sbjct: 140 CGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN-------- 191

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  +++  CL  F+  E L SD KF C  C   QE+ K+M
Sbjct: 192 -----------------------TSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRM 228

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            ++KLP++   H+KRF++        KV   + FPL L                 R F  
Sbjct: 229 RVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFNT 271

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
             D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+ 
Sbjct: 272 SDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIE 327

Query: 548 ------------AAQGYMMFY 556
                       +  GY++FY
Sbjct: 328 DFYGLTSDIQKSSETGYILFY 348


>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
          Length = 355

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 160/382 (41%), Gaps = 82/382 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C  D  +S   
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTCLADLFYSIAT 79

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKPRSQ- 315
              ++   +P KF+    +      +Y QQDAHEF   +++ I+E +  E+ Q KP    
Sbjct: 80  QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERTQSKPTGGK 139

Query: 316 -GNGDCC-------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKT 367
            G GD           H +F GIL S+  C+ C   S+  +   D  +D++ N       
Sbjct: 140 CGAGDAAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN------- 192

Query: 368 SSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQ 427
                                   +++  CL  F+  E L SD KF C  C   QE+ K+
Sbjct: 193 ------------------------TSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKR 228

Query: 428 MSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFP 487
           M ++KLP++   H+KRF++        KV   + FPL L                 R F 
Sbjct: 229 MRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFN 271

Query: 488 FDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTV 546
              D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+
Sbjct: 272 TSDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTI 327

Query: 547 R------------AAQGYMMFY 556
                        +  GY++FY
Sbjct: 328 EDFYGLTSDIQKSSETGYILFY 349


>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
           mellifera]
 gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
           florea]
          Length = 354

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 160/381 (41%), Gaps = 81/381 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C  D  +S   
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTCLADLFYSIAT 79

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKPRSQ- 315
              ++   +P KF+    +      +Y QQDAHEF   +++ I+E +  E+ Q KP    
Sbjct: 80  QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERSQSKPAGGK 139

Query: 316 -GNGDC------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
            G GD          H +F GIL S+  C+ C   S+  +   D  +D++ N        
Sbjct: 140 CGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN-------- 191

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  +++  CL  F+  E L SD KF C  C   QE+ K+M
Sbjct: 192 -----------------------TSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRM 228

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            ++KLP++   H+KRF++        KV   + FPL L                 R F  
Sbjct: 229 RVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFNT 271

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
             D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+ 
Sbjct: 272 SDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIE 327

Query: 548 ------------AAQGYMMFY 556
                       +  GY++FY
Sbjct: 328 DFYGLTSDIQKSSETGYILFY 348


>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
           impatiens]
          Length = 369

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 160/381 (41%), Gaps = 81/381 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C  D  +S   
Sbjct: 40  GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTCLADLFYSIAT 94

Query: 260 CGDRM-PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKPRSQ- 315
              ++   +P KF+    +      +Y QQDAHEF   +++ I+E +  E+ Q KP    
Sbjct: 95  QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERSQSKPTGGK 154

Query: 316 -GNGDC------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
            G GD          H +F GIL S+  C+ C   S+  +   D  +D++ N        
Sbjct: 155 CGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN-------- 206

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  +++  CL  F+  E L SD KF C  C   QE+ K+M
Sbjct: 207 -----------------------TSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRM 243

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            ++KLP++   H+KRF++        KV   + FPL L                 R F  
Sbjct: 244 RVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFNT 286

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
             D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+ 
Sbjct: 287 SDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIE 342

Query: 548 ------------AAQGYMMFY 556
                       +  GY++FY
Sbjct: 343 DFYGLTSDIQKSSETGYILFY 363


>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
 gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
          Length = 1123

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGDPVM----- 364

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 365 ---YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|345496176|ref|XP_001603604.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Nasonia
           vitripennis]
          Length = 1000

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 175/380 (46%), Gaps = 72/380 (18%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV-RLCLACDLDTMF 255
           G+ GL NLGN+C+MNS++Q L +T  L  YF  +++  +  ++ + V R  +A ++  + 
Sbjct: 662 GITGLKNLGNSCYMNSIIQCLSNTVYLAKYFNDNKYTDHLNRNIDKVARGYVAEEVAQVI 721

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR-- 313
            A++ G     SP        ++     +++QQD+HEF + +LD +H  + K + K R  
Sbjct: 722 KALWRGQYKSISPRDLKNVIGQYKMQFENFDQQDSHEFLMFLLDWMHNDL-KQKIKTRYD 780

Query: 314 -----------SQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
                         NG   +  ++F G LRS + C+ C   STT++     ++ L     
Sbjct: 781 RALTIAETEWEKSMNGQSSVISKLFFGQLRSTIECLYCNQNSTTYETFNSLTMSLP---- 836

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                 ++  C   TL  C+ +F   +R+     + C  C+V +
Sbjct: 837 ----------------------TTNKC---TLDECVKKFVSGQRVSG---WKCPNCKVPR 868

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSS--VRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
           E +K+  I KLP +   H+ RF  +S  + K +  VD    FP        L++ I+R  
Sbjct: 869 EGMKKFDIAKLPHIIVIHLNRFGETSGWLEKKNTAVD----FP--------LTNFIMR-- 914

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS--NKWYKCDDAWI 538
               +   D D  N  N  S  + L+A+  H G ++ GHY  Y + +  NKWYK DD  +
Sbjct: 915 ---HYVVQDNDNFN--NSQSYNYNLYAMSNHYGTMEGGHYTAYCKSNHQNKWYKYDDHTV 969

Query: 539 TEVNENTVR--AAQGYMMFY 556
           +EV  N V+  +   Y++FY
Sbjct: 970 SEVQANVVKNQSTSAYLLFY 989


>gi|351702295|gb|EHB05214.1| Ubiquitin carboxyl-terminal hydrolase 17 [Heterocephalus glaber]
          Length = 491

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 163/376 (43%), Gaps = 78/376 (20%)

Query: 187 MSSSNGDLPRGL-RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL 245
           M S +   P G+  GL NLGNTC++N+ LQ L +TPPL NY LS R ++  C S  G   
Sbjct: 34  MISLSWKRPHGVGAGLWNLGNTCYVNATLQCLTYTPPLANYMLS-REHKPTCPSLTG--- 89

Query: 246 CLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV 305
           C+ C L    +           P + +       +     +Q+DAHEF + ++D + +  
Sbjct: 90  CMLCALQRHVTHAL------RHPGRVIQPLHTLIAAFHRQKQEDAHEFLMFIVDAMQQAE 143

Query: 306 EKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
              +         D  + H +F G  RS + C+ CG TS TFDP +D +LD++  Q  S+
Sbjct: 144 LHSE---------DRELMHHIFGGYWRSQIKCLHCGSTSDTFDPYLDITLDIKAAQ--SV 192

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
           K + T+S                               PE L  D  + C  C  +  + 
Sbjct: 193 KQALTRS-----------------------------IAPEELSGDNAYHCSVCLQKMPAT 223

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           K MS+     V    +KRF   +  K ++ V    Q+   LDM PY+S            
Sbjct: 224 KTMSLHTSSEVLILVLKRFSDFTGEKFAKHV----QYSECLDMQPYMSEQ---------- 269

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSN-KWYKCDDAWITEVNE 543
                      N     + L+AV+ H G    +GHY +Y++  + +WY+ +D  +T  + 
Sbjct: 270 -----------NRGPLLYTLYAVLIHAGSTCHSGHYFSYVKAGDGRWYQMNDNKVTACDT 318

Query: 544 NTVRAAQGYMMFYVQK 559
             V A   Y++FYV+K
Sbjct: 319 RCVLAQDAYVLFYVRK 334


>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
          Length = 1123

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 63/361 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+NLGNTCF+N+ +Q L +TPPL NY LS  H R   Q       C+ C +       F
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS----FCMLCVMQNHIVQAF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P  F+    + A +     Q+DAHEF    +D + +       K   Q    
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA- 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + H++F G LRS V C  C   S T+DP +D +L++                      
Sbjct: 238 TTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR--------------------- 276

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                       + ++  L+ F + + L  +  + C +C+ +  + K+ +I +   V   
Sbjct: 277 ----------QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTL 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF + S  K+++ V     +P  L++ PY+S +             +GD        
Sbjct: 327 SLKRFANFSGGKITKDVG----YPEFLNIRPYMSQN-------------NGD-------- 361

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H+G    AGHY  Y++ SN +WY+ +D+ +   N   V   Q Y++FY+
Sbjct: 362 PVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYL 421

Query: 558 Q 558
           +
Sbjct: 422 R 422


>gi|25152734|ref|NP_510570.2| Protein USP-33 [Caenorhabditis elegans]
 gi|22265887|emb|CAB01885.2| Protein USP-33 [Caenorhabditis elegans]
          Length = 716

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 181/412 (43%), Gaps = 66/412 (16%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLS-----DRHNRYYCQSKNGVRLCLACD 250
           RGL G  N GNTC+MN+VLQ L H  P   Y +         N  +   K  +++ L  D
Sbjct: 179 RGLLGYLNFGNTCYMNAVLQLLGHCSPFTQYLIELIPPGGWSNCSHDIPKTAIQMAL--D 236

Query: 251 LDTMFSAIFCGDRMPY-SPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE--K 307
           L  M+S       +PY SP K +            ++QQDA EF  ++LD +   ++   
Sbjct: 237 LRNMYSDF----PLPYLSPWKIITCVRNEMPGFECFQQQDASEFMRNLLDILDRDLKTCS 292

Query: 308 DQHKPRS---QGNG--DCCIAHR----------VFSGILRSDVMCMACGFTSTTFDPCVD 352
           + H+  +    GN   D  IA            +F G+L + + C +CGF S T +  +D
Sbjct: 293 EYHRTNTLIEMGNPEMDYAIAMNAPHTKTAISAIFQGVLENQIQCHSCGFRSRTIENFLD 352

Query: 353 FSLDL-EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGI---------STLMGCLDRFT 402
            S+ +   N+   M  S         C +  +   Q+ G          ++L  CLDRF 
Sbjct: 353 LSIPIVGENEFEEMYASKKLDTPKAPCTSSNIEDGQDPGFLVHQGAFNKTSLESCLDRFF 412

Query: 403 RPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQF 462
           +   L  D ++ C +C+V  ++ K     +LP V    +KRF H+     S KV + ++F
Sbjct: 413 QNSTLQDDNQYSCSKCEVLVDATKSTKAHRLPEVIIIQLKRFRHTMFG--SCKVGKVVEF 470

Query: 463 PLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYV 521
           P             LRS+   R+         T  EP+  ++L   V H G+ L+ GHYV
Sbjct: 471 P-------------LRSQDFGRW--------TTSGEPAL-YDLVGFVVHEGRSLEFGHYV 508

Query: 522 TYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKASEKQGT 571
           +Y R    N+WYK DD  +T  +   V  +Q Y++ Y +     + S  Q T
Sbjct: 509 SYCRHEQDNQWYKFDDMVVTRCDATQVAKSQPYILMYRKHTTNGEPSISQNT 560


>gi|391346587|ref|XP_003747554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
           [Metaseiulus occidentalis]
          Length = 332

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 169/373 (45%), Gaps = 77/373 (20%)

Query: 210 MNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCG-DRMPYSP 268
           MNS++Q L HT  L +YF   R  R    + + ++  LA    ++ ++++   D    SP
Sbjct: 1   MNSIIQCLVHTQ-LADYF-RGRAFRADVNTSSLMKGDLAQAFASLVTSMWTSKDGSAISP 58

Query: 269 AKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS----QGNGDCCIAH 324
            +F     ++A     Y QQDA EF   +L G+HE V + + +PR     + +G      
Sbjct: 59  TEFRSQIQKYAPRFMGYSQQDAQEFLRYLLQGLHEDVNRVRIQPRGTCLPEIDGSLSDHQ 118

Query: 325 R------------------VFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
           +                  +F G L+S + C  CG  S TFDP  D SL +         
Sbjct: 119 KAAESWRRYLRVDDSRIVDLFVGQLKSTLKCSECGHKSVTFDPFWDLSLPI--------- 169

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
                             S   C  STL  CL+ FT+ E L  D+K  C QC+ RQ   K
Sbjct: 170 ------------------SDSRCTASTLQQCLEYFTKEEVLDGDEKPTCDQCKKRQRMTK 211

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRF 485
            +SI K P +   H+KRF +S   +   K++  +QFPL +LD++ ++S+       G+  
Sbjct: 212 NLSIWKCPKILVLHLKRFGNS--ERYRSKLETNVQFPLRNLDISAFMSNG------GDSH 263

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNE 543
           F               ++ L  V  H+G   +GHY       ++ +WY C+DA ++EV E
Sbjct: 264 F--------------CKYNLIGVSNHSGSTHSGHYTATCLNPINRQWYSCNDARVSEVGE 309

Query: 544 NTVRAAQGYMMFY 556
           + V +++ Y++FY
Sbjct: 310 SRVVSSEAYVLFY 322


>gi|392887711|ref|NP_493434.3| Protein USP-3 [Caenorhabditis elegans]
 gi|379657283|emb|CAC14423.3| Protein USP-3 [Caenorhabditis elegans]
          Length = 550

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 162/368 (44%), Gaps = 60/368 (16%)

Query: 199 RGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYC----QSKNGVRLCLACD--LD 252
           RG+ N+GNTCFMN+VLQAL      R Y +S      Y     + KNG   C   D    
Sbjct: 229 RGMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEYRK 288

Query: 253 TMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP 312
            + S      R P +P +F  ++         + Q D+HEF    +D +H ++ K +  P
Sbjct: 289 LLISQSARSFREPTAPNEFREAFISVCPRFRGFRQHDSHEFMRYFMDSLHTEMRKCRKLP 348

Query: 313 RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKS 372
               +    I+ + F G L+S V+C  C   S   D  +D SLD+ P Q ++ K      
Sbjct: 349 GMPDDKHTPIS-KYFEGTLQSSVICQTCRNCSNKIDEFMDLSLDI-PAQRNASKVR---- 402

Query: 373 NHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 432
                                L  CL  F + E L   +K  C +C+ +Q   KQM IRK
Sbjct: 403 ---------------------LSDCLSTFFKLEMLEKGEKPECAKCKTKQTCSKQMFIRK 441

Query: 433 LPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNRFFPFDGD 491
           LP V C H+KRF     R    K D  + FP+  LD+  +L+               D D
Sbjct: 442 LPQVLCLHMKRF-----RDNGGKNDAIIDFPMGQLDVTQFLTD--------------DSD 482

Query: 492 ESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQ 550
           E+     P + + L +++ H G    +GHY+ + + + +W++ DD  +  V+E  V   +
Sbjct: 483 EA-----PCT-YSLQSIIVHIGYGCGSGHYIAFGKRNGRWFQFDDTVVKGVDEAHVSKQK 536

Query: 551 GYMMFYVQ 558
            Y++ Y +
Sbjct: 537 AYVLLYTK 544


>gi|335302607|ref|XP_003359505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Sus scrofa]
          Length = 517

 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 179/418 (42%), Gaps = 96/418 (22%)

Query: 166 PWSPDLRER-----SLMVN---NASPIDSMSSSNGDLPRGLR------GLNNLGNTCFMN 211
           PW P   E+       + N   +A+P+ ++       P   R      GL NLGNTC++N
Sbjct: 33  PWGPSGPEKPSPSSQALCNQQADAAPVAAVGPVPTKGPLSWRPSVVGAGLQNLGNTCYVN 92

Query: 212 SVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAK- 270
           +VLQ L HTPPL    L+ +H R  CQ +    LC A       + +  GD +   P K 
Sbjct: 93  AVLQCLTHTPPLAISLLNGQHQR-ACQKQPFCMLC-AVRAHVTRALLHPGDVI--QPRKD 148

Query: 271 FLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGI 330
            + S+ RH        Q+DAHEF +  LD +     +D             +  ++F G 
Sbjct: 149 LVASFHRH-------RQEDAHEFLMFALDAMQRCPSED------------TLIQQIFGGC 189

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
            RS + C+ C   S TFDP +D +LD+   Q                             
Sbjct: 190 WRSQIQCLRCLGVSDTFDPYLDVTLDITAAQ----------------------------- 220

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
             ++   L    + E+L  +  + C  C  +  + K++++ +   V    +KRF   +  
Sbjct: 221 --SVEQALRELVKAEKLDGENAYHCGVCLRKGPATKRLTLHRASKVLILVLKRFTDVTGD 278

Query: 451 KMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVT 510
           KM +KV    ++P  LD+ PYLS                  ++  L+     +ELFAV+ 
Sbjct: 279 KMDKKV----RYPEHLDLQPYLSV----------------QKAGALD-----YELFAVLV 313

Query: 511 HTG-KLDAGHYVTYLRLSNK-WYKCDDAWITEVNENTVRAAQGYMMFYVQKMLYYKAS 566
           H+G     GHY  Y+R  N  WY+ DD+ +T  +  +  +   Y++FY+Q+    +A+
Sbjct: 314 HSGWTCHQGHYFCYIRAGNGWWYRMDDSKVTACDTASALSQSAYVLFYIQRGELERAT 371


>gi|335776008|gb|AEH58762.1| ubiquitin carboxyl-terminal hydrolase 3-like protein [Equus
           caballus]
          Length = 413

 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 170/371 (45%), Gaps = 67/371 (18%)

Query: 172 RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQAL---------FHTPP 222
           R+R L+ N++     +  +         GL NLGNTCFMN++LQ+L         F   P
Sbjct: 80  RKRKLLENSSLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELP 139

Query: 223 ---LRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHA 279
              LRN   + R   Y+ +S+    + L  +      A++ G +  +SP    Y  W+  
Sbjct: 140 AVELRNGKTAGRRT-YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 198

Query: 280 SNLASYEQQDAHEFFISMLDGIHEKVEKD----------QHKPRSQGNGDCCI------A 323
            N   Y+QQDAHEF   +LD +H +++            Q       +  CCI       
Sbjct: 199 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSPSNKCCINGASTVV 258

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F GIL+++V C+ CG  S  FDP +D SLD+ P+Q  + ++ +              
Sbjct: 259 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI-PSQFRNKRSKN-------------- 303

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
              +N  + +L  CL  FT  E L   + + C +C+ +Q+S K+  I+KLP V C H+KR
Sbjct: 304 --QENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKR 361

Query: 444 FEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSE 502
           F  ++   +  KVD Y++FPL  LDM  YL              P +    N L      
Sbjct: 362 FHWTAY--LRNKVDTYVEFPLRGLDMKCYLLE------------PENSGPENCL------ 401

Query: 503 FELFAVVTHTG 513
           ++L AVV H G
Sbjct: 402 YDLAAVVVHHG 412


>gi|345492284|ref|XP_001603431.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Nasonia
           vitripennis]
          Length = 864

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 135/583 (23%), Positives = 229/583 (39%), Gaps = 118/583 (20%)

Query: 65  RCGVCGDSSCPRLYACM--ACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELF 122
           +C  C D+  P L+ C+   C  V C    H  H  IH  K     +H   +++    ++
Sbjct: 32  KCVEC-DNEGPNLWLCLYPECRYVGC-AEQHLDHSTIHNRK---FLTHSAHMNLSSNRIW 86

Query: 123 CCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRER-SLMVNNA 181
           C +C+ +++ R   +  +  +   ++      +      I+ +P   D  +     V+++
Sbjct: 87  CYSCQKEIHTRHIPSPSLSPNQLDLMVFGNKFSGDASVSINCKPEKFDFHQYFQRFVDDS 146

Query: 182 SPIDSMSSSNGD-----------------------LPRGLRGLNNLGNTCFMNSVLQALF 218
           +  + +++  GD                        PRGL GL N+GNTC+MNS LQAL 
Sbjct: 147 NAANRINTDRGDSFLDKSEDSPDSTDSDESRDFSGKPRGLVGLQNIGNTCYMNSALQALS 206

Query: 219 HTPPLRNYFLSDRHNRYYC--QSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWW 276
           + PPL  +FL   H   Y     K G+ L     +  M++    G  +P++    L    
Sbjct: 207 NVPPLTQFFLDCAHMVSYVARDRKPGLSLSYLNLIREMWNKRTRGYTVPHA---ILTGIR 263

Query: 277 RHASNLASYEQQDAHEFFISMLDGIHEKVE--------------KDQHKPRS--QGNGDC 320
                   Y Q D  EF    +D +HE+++              +++   RS  +G  D 
Sbjct: 264 TVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEEXXXXXXXXLRNKFTSRSVKKGTADV 323

Query: 321 C-------------------------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSL 355
                                     I   +F G L S V C+ C   ST  +   D SL
Sbjct: 324 TYTQQQRSSQSSPVKHHSKKQMKTRSIISDIFDGKLLSSVQCLTCDRISTRIETFQDLSL 383

Query: 356 DLEPNQGSSM-KTSSTKSNHSCNCEADGMNSSQNCGIS---------------TLMGCLD 399
            +      +M    S     +  C      ++Q+  IS               +L  CL 
Sbjct: 384 PIPSRDHINMIHQGSLTPQKASPCSDVVYVTNQSGWISWFLQLMRSWLWGPTVSLHDCLS 443

Query: 400 RFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRY 459
            F   + L  D  + C++C   +  +K   + +LP V C H+KRF H  +   S K+  Y
Sbjct: 444 AFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEVLCVHLKRFRHELM--FSSKIASY 501

Query: 460 LQFPLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAG 518
           + FPL  L+M P+L    +                       + ++L +V+ H G    G
Sbjct: 502 VSFPLEDLEMRPHLHKDCVSKE--------------------TSYDLISVICHHGTAGGG 541

Query: 519 HYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           HYV Y    ++N+W++ DD  +T V+  TV+    Y++FY ++
Sbjct: 542 HYVCYALNPITNQWFEFDDQCVTPVSRETVQNCGAYVLFYRKR 584


>gi|334314734|ref|XP_001380549.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Monodelphis domestica]
          Length = 370

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 165/374 (44%), Gaps = 69/374 (18%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     Q  +G     A     + 
Sbjct: 39  QGVTGLRNLGNTCYMNAILQCLCSITPLVEYFLSGKYITAL-QKDSGEA---ATAFAYLM 94

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP--- 312
           + ++ GD    SP  F  +  +         QQDA EF I +L+ +HE ++K + K    
Sbjct: 95  TDMWLGDSDCVSPEVFRTAIGKIYPTFLKRTQQDAQEFLIYVLNELHEALKKYRRKKPHE 154

Query: 313 -------RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
                  R   + +  I  R+F G L  D++C+ C                         
Sbjct: 155 KVTTKCYRKVASSESSIITRLFEGQLNYDIVCLKC------------------------- 189

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
             + T  N      +  + S   C +   +GC   F + + L  + +  C  C+ +Q++ 
Sbjct: 190 -ENCTYKNEVFTVLSLPIPSECECSLQECLGC---FFQQDTLTWNNQIHCAFCESKQDAA 245

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFGNR 484
            + SI K P    FH+KRF+     +M RK+   + +PL +LD++PY+            
Sbjct: 246 VRASIAKAPKTVIFHLKRFDCQG--RMKRKLRTDIHYPLNNLDLSPYI------------ 291

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVN 542
            +P        L     ++ L  VV H G LD GHY  + +  +S  WY  DD  + E+ 
Sbjct: 292 -YP--------LFRKHPKYSLCGVVNHFGDLDGGHYTAFCKNTVSQTWYSFDDTRVCEIP 342

Query: 543 ENTVRAAQGYMMFY 556
           +++V+ A  Y++FY
Sbjct: 343 DSSVQTAAAYLLFY 356


>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
           corporis]
 gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
           corporis]
          Length = 462

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 162/390 (41%), Gaps = 86/390 (22%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GL GL N+GNTCFMNSVLQ L +T PL  Y L +     Y    N     +   L   FS
Sbjct: 120 GLNGLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEE----YMTDINFTISAMKGSLIKAFS 175

Query: 257 AIFCGDRMPYSPAKFLYS------WWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
            +      P +  K + +        + A     Y QQDA EF   +L+G+HE V +   
Sbjct: 176 NVIQELWAPNAEDKIINTTNFKSQIQKFAPRFMGYAQQDAQEFLRYLLEGLHEDVNRVTV 235

Query: 311 KPRS---------QGNGDCCIAHR------------VFSGILRSDVMCMACGFTSTTFDP 349
           KP+            N     A +            +F G L+S + C  CG  S TFDP
Sbjct: 236 KPQQILTDIDDSLSDNQKATEAWKRYLRMDDSKVVDIFVGQLKSTLQCTVCGHCSVTFDP 295

Query: 350 CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
             D SL +    G                               L  CLD FT+ E L  
Sbjct: 296 FWDLSLPVPSRTGQ----------------------------PKLQSCLDAFTKEEVLDG 327

Query: 410 DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDM 468
           ++K  C +C+ R++  K  SI+K P +   H+KRF  S   +   K+   + FPL+ LD+
Sbjct: 328 EEKPTCSKCETRRKCTKSFSIQKFPKILVLHLKRF--SPTERYRGKLSITVDFPLTNLDL 385

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--L 526
           +PY ++                            + L+A+  H+G    GHY  Y +   
Sbjct: 386 SPYAANK----------------------GQGCTYNLYAISNHSGTAYGGHYTAYCKHPY 423

Query: 527 SNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           S  W++ +D+ ++ ++  +V + + Y++FY
Sbjct: 424 SGNWHEYNDSRVSSLSSRSVVSGEAYVLFY 453


>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
 gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
           enzyme 1; AltName: Full=Ubiquitin-specific-processing
           protease 12
 gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
 gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
 gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
 gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
          Length = 370

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 93

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 94  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 153

Query: 317 -NGDC-----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NGD               H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 154 RNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 209

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 210 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLPL+   H+KRF++        K+   + FPL L                 R
Sbjct: 243 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 285

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 286 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 341

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 342 QAIEEFYGLTSDISKNSESGYILFY 366


>gi|301770087|ref|XP_002920465.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Ailuropoda melanoleuca]
          Length = 373

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 167/376 (44%), Gaps = 72/376 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     +  + V    A     + 
Sbjct: 41  QGVTGLRNLGNTCYMNAILQCLGSISPLAEYFLSGKYITALQKDCSEVATAFA----YVM 96

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + ++ GD    SP  F  +            QQDA EF I +L+ +HE ++K  H+ RS 
Sbjct: 97  TDMWLGDSECVSPEIFRSALGSLYPAFMKKTQQDAQEFLIYVLNELHEALKK-YHRRRSY 155

Query: 316 GNGD---CC---------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
           G      CC         I  ++F G L   +MC+ C   S T+            N+  
Sbjct: 156 GKESVPRCCRKVIANETSIITQLFEGQLNYSIMCLKC--ESCTYK-----------NEVF 202

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           ++ +    S + C                 L  CL  F + + L  + +  C  C+ +QE
Sbjct: 203 TVLSLPIPSEYEC----------------YLQDCLQCFFQQDTLTWNNQIHCSFCETKQE 246

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFG 482
           +  + SI K P +  FH+KRF+   +  M RK+   + +PL+ LD+ P++   + R    
Sbjct: 247 TAVRASISKAPKIIIFHLKRFD--ILGTMKRKLRTDIHYPLTNLDLTPFI-CPVFRKH-- 301

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITE 540
                              ++ L AVV H G LD GHY  + +  ++  WY  DD  + E
Sbjct: 302 ------------------PKYNLCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVRE 343

Query: 541 VNENTVRAAQGYMMFY 556
           + + +V+ A  Y++FY
Sbjct: 344 IPDTSVQTATAYLLFY 359


>gi|345781712|ref|XP_854129.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Canis lupus familiaris]
          Length = 535

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 173/393 (44%), Gaps = 80/393 (20%)

Query: 181 ASPIDSMSSSNGDLP--------RGLR----GLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           +SP D ++ ++  LP        + L     GL N+GNTC++N+ LQ L +T PL +Y L
Sbjct: 50  SSPTDPLAPASAGLPPTKTPLSWKSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYML 109

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           S +H    C+ +     C+ C L    + + C       P + L       +    ++Q+
Sbjct: 110 SQQHGTT-CRRQTS---CMLCTLQAHLTRVLC------HPGRVLRPLPLLLAAFHRHKQE 159

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
           DAHE+ + +LD + +    +      +   D  +  ++F G  RS + C+ C   S+T +
Sbjct: 160 DAHEYLMFILDAMQQACLPEDKLSDPERPQDSTLIQQLFEGYWRSQIQCLHCQGISSTLE 219

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P +D SLD+                       D  + SQ          L++  +PE L 
Sbjct: 220 PYLDISLDI----------------------GDAHSVSQ---------ALEQLVKPELLE 248

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
            +  + C++C  +  + K +++   P V    ++RF   +  KM+++V    Q+P  LDM
Sbjct: 249 GENAYHCRKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEV----QYPERLDM 304

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLS 527
             YLS          R  P               + L+AV+ H G+   +GHY  +++  
Sbjct: 305 QHYLSE--------QRAGPL-------------VYVLYAVLVHAGRSCHSGHYFCFVKAG 343

Query: 528 N-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           N +WYK DDA ++  +         Y++FY+QK
Sbjct: 344 NGQWYKMDDAKVSACDVTCALRQPAYVLFYMQK 376


>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
          Length = 355

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 78

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 79  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 138

Query: 317 -NGDC-----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NGD               H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 139 RNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 194

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 195 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLPL+   H+KRF++        K+   + FPL L                 R
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 270

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 271 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 326

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 327 QAIEEFYGLTSDISKNSESGYILFY 351


>gi|354471307|ref|XP_003497884.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
           carboxyl-terminal hydrolase 50-like [Cricetulus griseus]
          Length = 450

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 171/376 (45%), Gaps = 72/376 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L +  PL  YFLS ++     +  + V    A     + 
Sbjct: 66  QGVTGLRNLGNTCYMNAILQCLCNISPLVEYFLSGKYITALQKDCSEVTTAFA----YLM 121

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD--QHKPR 313
           + ++ GD    SP  FL +            QQDA EF I +L+ +HE ++K   +    
Sbjct: 122 TDMWLGDSDCVSPEIFLSALGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRAYE 181

Query: 314 SQGNGDCC---------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            + +  CC         I  R+F G L   + C+ C   + T+            N+  +
Sbjct: 182 RRSSQKCCRKVMASETSIITRLFEGQLNYSITCLKC--ENCTYK-----------NEVFT 228

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
           + +    S + C                +L  CL  F + + L  + +  C  C+++QE+
Sbjct: 229 VLSLPIPSEYEC----------------SLQDCLQCFFQQDTLTWNNQIHCSFCEIKQET 272

Query: 425 LKQMSIRKLPLVSCFHIKRFE-HSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFG 482
             + +I K P +  FH+KRF+   SV+   RK+   +++PL+ LD+ PY+   + R    
Sbjct: 273 AVRATISKAPKIIVFHLKRFDIQGSVK---RKLRTDIRYPLTNLDITPYI-CPVFRKH-- 326

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITE 540
                              ++ L AVV H G LD GHY  + +  ++  WY  DD  ++E
Sbjct: 327 ------------------PKYNLCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSE 368

Query: 541 VNENTVRAAQGYMMFY 556
           + + +V+ A  Y++FY
Sbjct: 369 IPDTSVQTATAYLLFY 384


>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
          Length = 355

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 78

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 79  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 138

Query: 317 -NGDC-----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NGD               H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 139 RNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 194

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 195 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLPL+   H+KRF++        K+   + FPL L                 R
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 270

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 271 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 326

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 327 QAIEEFYGLTSDISKNSESGYILFY 351


>gi|326919202|ref|XP_003205871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Meleagris
           gallopavo]
          Length = 578

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 166/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   LS     Y  Q K    L L C  D   S   
Sbjct: 248 GLVNFGNTCYCNSVLQALYFCRPFRENVLS-----YKAQQKKKENL-LTCLADLFHSIAT 301

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   S  R  ++L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 302 QKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKL 361

Query: 317 -NGDCCIA-----------HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG+   A           H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 362 KNGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQN---- 417

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+QK++C+ C  +QE+
Sbjct: 418 ---------------------------TSITHCLRDFSNTETLCSEQKYYCETCCSKQEA 450

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 451 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----------------R 493

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD  N        ++L AVV H G   + GHY+T ++    W   DD  + +++ 
Sbjct: 494 LFNTSGDAVNL----DRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDA 549

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 550 QAIEEFYGLTSDISKNSESGYILFY 574


>gi|392346694|ref|XP_003749615.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
           [Rattus norvegicus]
          Length = 385

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 179/409 (43%), Gaps = 73/409 (17%)

Query: 164 YRPWSPDLRERSLMVNNASPIDSMSSSNGDLP--RGLRGLNNLGNTCFMNSVLQALFHTP 221
           +RP+  D      ++   +  DS+  S    P  +G+ GL NLGNTC+MN++LQ L  T 
Sbjct: 4   HRPFPADDFGAYYILAECADYDSLPESETQ-PHFQGVTGLRNLGNTCYMNAILQCLCSTS 62

Query: 222 PLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASN 281
           PL  YFLS ++     +  + V    A     + + ++ GD    SP  FL +       
Sbjct: 63  PLVEYFLSGKYITALQKDCSEVTTAFA----YLMTDMWLGDSDCVSPEIFLSAVGSLYPA 118

Query: 282 LASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG--DCC---------IAHRVFSGI 330
                QQDA EF I +L+ +HE ++K      S+     +CC         I  R+F G 
Sbjct: 119 FLKKTQQDAQEFLIYVLNELHEALKKHCRGRASEKRTAQNCCRKVPAHETSIITRLFEGQ 178

Query: 331 LRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCG 390
           L   + C+ C   + T+            N+  ++ +    S + C              
Sbjct: 179 LSYSITCLKC--ETCTYK-----------NEVFTILSLPIPSEYEC-------------- 211

Query: 391 ISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVR 450
             +L  CL  F + + L  + +  C  C+++QE+  + +I K P +   H+KRF+     
Sbjct: 212 --SLQDCLQCFFQQDTLTWNNQIHCSFCEIKQETAVRTTISKAPKIIVLHLKRFDIQGAV 269

Query: 451 KMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVV 509
           K   + D  + +PL+ LD+ PY+   + R                       ++ L AVV
Sbjct: 270 KKKLRTD--IHYPLTNLDLTPYI-CPVFRKH--------------------PKYNLCAVV 306

Query: 510 THTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
            H G LD GHY  + +  ++  WY  DD  ++E+ + +V+ A  Y++FY
Sbjct: 307 NHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFY 355


>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
 gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
          Length = 370

 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 169/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R+  L+ +      + K  +  CLA     +F +I 
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQP---RKKESLLTCLA----DLFHSIA 92

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 93  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152

Query: 317 --NGDC-----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             NGD               H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 153 LRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 209

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 210 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 241

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 242 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 284

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 285 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 340

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 341 AQAIEEFYGLTSDISKNSESGYILFY 366


>gi|332244569|ref|XP_003271445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           6-like [Nomascus leucogenys]
          Length = 399

 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 162/372 (43%), Gaps = 70/372 (18%)

Query: 189 SSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLA 248
           SS G    G  GL N+GNTC++N+ LQ L +TPPL NY LS  H+    Q+ +  + C+ 
Sbjct: 71  SSRGPAAVG-AGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHS----QTCHRHKCCML 125

Query: 249 CDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKD 308
           C +    +      R  + P   +      A+     +Q+DAHEF +  +D +  K    
Sbjct: 126 CTMQAHIT------RALHRPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAM-RKACLP 178

Query: 309 QHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
            +K     + D  + H++F G  RS + C+ C   S TFDP +D +LD++  Q  S+K +
Sbjct: 179 GYKQVDPHSKDTTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQ--SVKQA 236

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                        L++  +PE L  +  + C  C  +  + K +
Sbjct: 237 -----------------------------LEQLVKPEELNGENAYHCGLCLQKAPASKTL 267

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           ++     V    +KRF   +  K+++ V    Q+P  LDM PY+S               
Sbjct: 268 TLHTSAKVLILVLKRFSDVTGNKLAKNV----QYPECLDMQPYMSQQ------------- 310

Query: 489 DGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRL-SNKWYKCDDAWITEVNENTV 546
                   N     + L+AV+ H G     GHY +Y++    +WYK D   +T     +V
Sbjct: 311 --------NTGPLVYVLYAVLVHAGWSGHNGHYFSYVKAQEGQWYKMDGDQVTASGITSV 362

Query: 547 RAAQGYMMFYVQ 558
            + Q Y +FY+Q
Sbjct: 363 LSQQAYDLFYIQ 374


>gi|444520452|gb|ELV13004.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Tupaia
           chinensis]
          Length = 442

 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 150/358 (41%), Gaps = 69/358 (19%)

Query: 204 LGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDR 263
           +GNTC+MN+ LQ L +TPP+ NY LS  H+    Q+ +    C+ C +    + +     
Sbjct: 1   MGNTCYMNAALQCLTYTPPIANYMLSQEHS----QTCHHQGFCMLCIMQAHITWVL---- 52

Query: 264 MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIA 323
               P   +   +  A++    EQ+DAHEF +  L+ + E     Q K     + D  + 
Sbjct: 53  --QHPGSIIQPSYALAASFHRNEQEDAHEFLMFTLEAMQEASLSGQ-KHFDHPSEDSTLI 109

Query: 324 HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGM 383
             +F G  RS + C+ C   S TFDP +D SLD++  Q  S                   
Sbjct: 110 RAIFGGYWRSQIKCLHCHSVSDTFDPYLDISLDIKTAQSVSQ------------------ 151

Query: 384 NSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKR 443
                         L+   +PE L  +  + C  C  R+ + K +++     V    +KR
Sbjct: 152 -------------ALEELVKPEELDGENAYHCSVCLERRLASKTLTLHASSKVLILVLKR 198

Query: 444 FEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEF 503
           F   +  K ++ V    Q+P  LDM  Y S                       N     +
Sbjct: 199 FSDFTGEKTTKAV----QYPECLDMQTYTSEQ---------------------NRGPLIY 233

Query: 504 ELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
            L+AV+ H G     GHY  Y++  N +WYK DDA +T  +   V +   Y++FYVQK
Sbjct: 234 GLYAVLVHAGSSCHNGHYFCYIKAGNGQWYKMDDAEVTACDVTVVLSQPAYVLFYVQK 291


>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
          Length = 364

 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 92/388 (23%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R+  L+ +      + K  +  CLA     +F +I 
Sbjct: 34  GLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQP---RKKESLLTCLA----DLFHSIA 86

Query: 260 CGDR----MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              +    +P  P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  
Sbjct: 87  TQKKKVGVIP--PKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQN 144

Query: 316 G---NGDC-----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQ 361
           G   NGD               H +F G L ++  C+ C   S+  +  +D S+D+E N 
Sbjct: 145 GRLRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN- 203

Query: 362 GSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVR 421
                                         +++  CL  F+  E L S+ K++C++C+ +
Sbjct: 204 ------------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSK 233

Query: 422 QESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRF 481
           QE+ K+M ++KLP++   H+KRF++        K+   + FPL L               
Sbjct: 234 QEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL--------------- 278

Query: 482 GNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITE 540
             R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +
Sbjct: 279 --RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEK 332

Query: 541 VNENTVR------------AAQGYMMFY 556
           ++   +             +  GY++FY
Sbjct: 333 IDAQAIEEFYGLTSDISKNSESGYILFY 360


>gi|431920985|gb|ELK18754.1| Ubiquitin carboxyl-terminal hydrolase 12 [Pteropus alecto]
          Length = 479

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 186/443 (41%), Gaps = 108/443 (24%)

Query: 162 IDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR--------------------GL 201
           +D R +S  L   +L   +  P+ S++ S+G +  G                      GL
Sbjct: 93  LDVRMYSDHLHRENL--ESVPPVHSVTVSDGIVTTGANASALEKEIGPEQFPVNEHYFGL 150

Query: 202 NNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCG 261
            N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S     
Sbjct: 151 VNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIATQK 204

Query: 262 DRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG---N 317
            ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G   N
Sbjct: 205 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 264

Query: 318 G-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMK 366
           G           D    H +F G L ++  C+ C   S+  +  +D S+D+E N      
Sbjct: 265 GSIDGEGSGGAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN------ 318

Query: 367 TSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLK 426
                                    +++  CL  F+  E L S+ K++C++C+ +QE+ K
Sbjct: 319 -------------------------TSITHCLRGFSNTETLCSEHKYYCEECRSKQEAHK 353

Query: 427 QMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFF 486
           +M ++KLP++   H+KRF++        K+   + FPL L                 R F
Sbjct: 354 RMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------RLF 396

Query: 487 PFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENT 545
              GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++   
Sbjct: 397 NTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQA 452

Query: 546 VR------------AAQGYMMFY 556
           +             +  GY++FY
Sbjct: 453 IEEFYGLTSDISKNSESGYILFY 475


>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
          Length = 486

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 168/384 (43%), Gaps = 85/384 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R+  L+     Y  Q +    L L C  D   S   
Sbjct: 157 GLVNFGNTCYCNSVLQALYFCRPFRDKVLA-----YKSQPRKKESL-LTCLADLFHSIAT 210

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 211 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 270

Query: 317 -NG----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            NG          D    H +F G L ++  C+ C   S+  +  +D S+D+E N     
Sbjct: 271 PNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN----- 325

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                     +++  CL  F+  E L S+ K++C++C+ +QE+ 
Sbjct: 326 --------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 359

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           K+M ++KLP++   H+KRF++        K+   + FPL L                 R 
Sbjct: 360 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------RL 402

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
           F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++  
Sbjct: 403 FNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQ 458

Query: 545 TVR------------AAQGYMMFY 556
            +             +  GY++FY
Sbjct: 459 AIEEFYGLTSDISKNSESGYILFY 482


>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
           [Cricetulus griseus]
          Length = 450

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 120 GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 173

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 174 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 233

Query: 317 -NGDC-----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NGD               H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 234 RNGDVDTEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 289

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 290 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 322

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 323 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 365

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 366 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 421

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 422 QAIEEFYGLTSDISKNSESGYILFY 446


>gi|242081757|ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
 gi|241941997|gb|EES15142.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
          Length = 998

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 166/366 (45%), Gaps = 68/366 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+N+GN+C+ N+VLQ L  T PL  Y L   H++  C  K     C  C+ + +   I 
Sbjct: 466 GLHNVGNSCYANAVLQCLMFTRPLTTYLLEGLHSKN-CSQKG---WCFMCEFEKL---IV 518

Query: 260 CGDR--MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRS-QG 316
            G R     SP   L       S+L   +Q+DAHEF    +D +     K+  K    Q 
Sbjct: 519 EGKRRKTALSPTGILSHLHDIGSSLGPGKQEDAHEFLRYAIDAMQSVCMKEASKGGVIQS 578

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
             +  +   +F G LRS + C  C  +S   +P +D +++++ +                
Sbjct: 579 MEETTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGD---------------- 622

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
                         IS+L   L+RFT  E L  + K+ C +C+  + + K+++I + P V
Sbjct: 623 --------------ISSLDEALERFTSTEVLDGENKYHCSRCKSYERAKKKLTIEEAPNV 668

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
               +KR++     K+S+ +    +FP +L+M  Y++               D D+ + +
Sbjct: 669 LTIALKRYQSGKFGKISKAI----RFPDTLNMGHYMNP--------------DTDDISPV 710

Query: 497 NEPSSEFELFAVVTHTGKLDA---GHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGY 552
                 + L+AVV H   ++A   GHYV Y++    KW+K DD+ +  V+ + V +   Y
Sbjct: 711 ------YSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAY 764

Query: 553 MMFYVQ 558
           M+ Y +
Sbjct: 765 MLLYAR 770


>gi|297791015|ref|XP_002863392.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
 gi|297309227|gb|EFH39651.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 167/372 (44%), Gaps = 67/372 (18%)

Query: 195 PRGL-RGLNNLGNTCFMNSVLQALFHTPPL----RNYFLSDRHNRYYCQSKNGVRLCLAC 249
           P G+  GL N GNTCF+ SVLQ   HT PL    R+Y   +  N   C ++   + C+  
Sbjct: 137 PTGVGAGLYNSGNTCFIASVLQCFTHTVPLIESLRSYMYQNPCN---CGNE---KFCVMQ 190

Query: 250 DLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQ 309
            L               +  +F  +    +S+     Q+DAHEF  S LD +       +
Sbjct: 191 ALRDHIELALRSSGHGINIDRFRDNLTHFSSDFMINHQEDAHEFLQSFLDKLERCCLDPK 250

Query: 310 HKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSS 369
           ++P S  + D  I   VF G L S + C  C   S TF+P + +SL++E           
Sbjct: 251 NEPGSILSQDMNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIE----------- 299

Query: 370 TKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMS 429
                                +  L   L+ FTR E+L  + +  C  C+ +    KQ+ 
Sbjct: 300 --------------------DVDNLWSALESFTRVEKL--EDQLTCDNCKEKVTKEKQLK 337

Query: 430 IRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFD 489
             +LP V+ FH+KRF++  V     K+  +++FPL LD+ P++S                
Sbjct: 338 FDQLPPVATFHLKRFKNDGV--TMEKIFEHVEFPLELDLLPFMS---------------- 379

Query: 490 GDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVR 547
              SN   E S+++ L+A V H G     GHY TY+R +   W+  DD+ +T ++E+ V 
Sbjct: 380 ---SNQNPEVSTKYHLYAFVEHIGIGATFGHYSTYVRSAPETWHNFDDSKVTRISEDRVL 436

Query: 548 AAQGYMMFYVQK 559
           +   Y++FY ++
Sbjct: 437 SRPAYILFYARE 448


>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
           harrisii]
          Length = 599

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 269 GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 322

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 323 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 382

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 383 PNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 438

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 439 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 471

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 472 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 514

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 515 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 570

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 571 QAIEEFYGLTSDISKNSESGYILFY 595


>gi|344297595|ref|XP_003420482.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
           africana]
 gi|344297601|ref|XP_003420485.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
           africana]
          Length = 529

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 161/371 (43%), Gaps = 73/371 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+G+TC++N+ LQ L +TPPL +Y LS  H     Q       C+ C +    +   
Sbjct: 77  GLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASCGQQG----YCVLCAMQDHITRAL 132

Query: 260 C--GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
              GD M   P+  L      A  L  ++Q+DAHEF +S LD + +   +     R    
Sbjct: 133 SHPGDVM--EPSHAL------ARGLHRHQQEDAHEFLMSTLDAVQKACLRSHRHLRGLSE 184

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  +  R+F G  RS + C  C   S TFDP +D +LD++  Q                
Sbjct: 185 -DTTLIRRIFGGYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQ---------------- 227

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                          ++   L++    E L  +  + C+ CQ +  + K +++   P   
Sbjct: 228 ---------------SVNQALEQLVTAEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF   S  K +++V    ++P SLD++  LS               DG       
Sbjct: 273 VLVLKRFSDLSGDKNAKQV----RYPASLDVSRCLSRQ-------------DGG------ 309

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMF 555
              + + L+AV+ H G     GHY++Y++  N KWY+ DDA ++  +   V + Q Y +F
Sbjct: 310 --PAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALF 367

Query: 556 YVQKMLYYKAS 566
           Y+ +    + S
Sbjct: 368 YIHQSELVRGS 378


>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
          Length = 440

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 110 GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 163

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 164 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 223

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 224 PNGNIDSENNSSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 279

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 280 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 312

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 313 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 355

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 356 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 411

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 412 QAIEEFYGLTSDISKNSESGYILFY 436


>gi|344297603|ref|XP_003420486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
           africana]
          Length = 621

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 161/371 (43%), Gaps = 73/371 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+G+TC++N+ LQ L +TPPL +Y LS  H     Q       C+ C +    +   
Sbjct: 77  GLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASCGQQG----YCVLCAMQDHITRAL 132

Query: 260 C--GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
              GD M   P+  L      A  L  ++Q+DAHEF +S LD + +   +     R    
Sbjct: 133 SHPGDVM--EPSHAL------ARGLHRHQQEDAHEFLMSTLDAVQKACLRSYRHLRGLSE 184

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  +  R+F G  RS + C  C   S TFDP +D +LD++  Q                
Sbjct: 185 -DTTLIRRIFGGYWRSRIQCRHCQGVSDTFDPYLDITLDIQAAQ---------------- 227

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                          ++   L++    E L  +  + C+ CQ +  + K +++   P   
Sbjct: 228 ---------------SVNQALEQLVTAEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF   S  K +++V    ++P SLD++  LS               DG       
Sbjct: 273 VLVLKRFSDLSGDKNAKQV----RYPASLDVSRCLSRQ-------------DGG------ 309

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMF 555
              + + L+AV+ H G     GHY++Y++  N KWY+ DDA ++  +   V + Q Y +F
Sbjct: 310 --PAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALF 367

Query: 556 YVQKMLYYKAS 566
           Y+ +    + S
Sbjct: 368 YIHQSELVRGS 378


>gi|357619921|gb|EHJ72306.1| hypothetical protein KGM_02366 [Danaus plexippus]
          Length = 354

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 168/380 (44%), Gaps = 74/380 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           RGL GL NLGNTC+MNS++Q L +T  L  YF + ++  +  +S +  R  +A +L  + 
Sbjct: 24  RGLTGLKNLGNTCYMNSIIQCLNNTAILVTYFCNGQYLEHVNRS-HSTRGAIAEELAAVV 82

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
            A++ G     +         +H  +    EQQD+HEF   ++D +H  ++     P  +
Sbjct: 83  RALWSGQYRFIAAKDLRSEVGKHQRSFRGNEQQDSHEFLTILMDWLHLDLQFTIKPPHKE 142

Query: 316 GNGDC------------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             G               +  R+F G +RS V C  C  +S T+D   + SL+L P    
Sbjct: 143 TLGASERAWHEYTKSKESLVLRLFYGQIRSTVRCTVCRASSPTYDSFSNLSLELPP---- 198

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                ++  C   TL  CL  +   E +     + C  C+ +++
Sbjct: 199 ---------------------AAARC---TLADCLKLYLNGETIPG---WNCPNCKEKRD 231

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKM---SRKVDRYLQFPLS-LDMAPYLSSSILRS 479
           ++K++ I +LP V   H KRF       M    RK   Y+ FPL  LDM  +        
Sbjct: 232 AVKKLDISRLPPVLVIHFKRFYVDPKEYMCNAYRKKQTYIDFPLEDLDMRQF-------- 283

Query: 480 RFGNRFFPFDGDESNTLNEPSSE-FELFAVVTHTGKLDAGHYVTYLRLS--NKWYKCDDA 536
                          +L+ P +  + L+AV  H G ++ GHY  Y + S   KWYK DD 
Sbjct: 284 ---------------SLHCPGNPIYNLYAVSNHYGTMEGGHYTAYCKSSVYGKWYKFDDH 328

Query: 537 WITEVNENTVRAAQGYMMFY 556
            ++E++   VR++  Y++FY
Sbjct: 329 LVSEMSSGEVRSSAAYILFY 348


>gi|34324152|gb|AAN10252.1| deubiquitinating enzyme [Mus musculus]
          Length = 526

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 173/401 (43%), Gaps = 76/401 (18%)

Query: 166 PWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLR-GLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L +    V     ++   S + + P+G   GL N GN+C++N+ LQ L HTPPL 
Sbjct: 17  PDAPELHQDEARVVEELTVNGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLC-LACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLA 283
           +Y LS  H++  C S  G ++C +   +         GD M   P+  L       S   
Sbjct: 77  DYMLSQEHSQTCC-SPEGCKMCAMEAHVTQSLLHSHSGDVM--KPSHIL------TSAFH 127

Query: 284 SYEQQDAHEFFISMLDGIHE---KVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMAC 340
            ++Q+DAHEF +  L+ +HE   +V + Q KP S+   D    H +F G  RS + C+ C
Sbjct: 128 KHQQEDAHEFLMFTLETMHESCLQVHR-QSKPTSE---DSLPIHDIFGGWWRSQIKCLLC 183

Query: 341 GFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDR 400
             TS T+D  +D  LD+   Q        T+                             
Sbjct: 184 QGTSDTYDRFLDIPLDISSAQSVKQALWDTE----------------------------- 214

Query: 401 FTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYL 460
             + E L  D  ++C +C+ +  + K + +   P V    + RF   +  K+ RKV    
Sbjct: 215 --KSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVS--- 269

Query: 461 QFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD-AGH 519
            +P  LD+ PYLS             P  G            + L+AV+ H G    +GH
Sbjct: 270 -YPEFLDLKPYLSE------------PTGG---------PLPYTLYAVLVHDGATSHSGH 307

Query: 520 YVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           Y   ++  + KWYK DD  +T  +  +V     Y++ YVQ+
Sbjct: 308 YFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLSYVQQ 348


>gi|443897977|dbj|GAC75315.1| ubiquitin C-terminal hydrolase [Pseudozyma antarctica T-34]
          Length = 1070

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 169/392 (43%), Gaps = 66/392 (16%)

Query: 197  GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN-GVRLCLACDLDTMF 255
            GL GL NLGN+C+MNS LQ L  T PL  + L   + +   ++   G +  LA  L  + 
Sbjct: 715  GLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKQAINRTNPLGTQGQLAMALAGLI 774

Query: 256  SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE----------KV 305
              ++       SP  F  +  R A +   Y+Q D+ EF   +LDG+HE           V
Sbjct: 775  HVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVVTRPAAV 834

Query: 306  EKDQHK-------PRSQGNGDCCIAHRV---------FSGILRSDVMCMACGFTSTTFDP 349
            E    +       P+   +      +R+         F G  R+ + C+ CG TSTT++ 
Sbjct: 835  EMTPEREAQLETLPQQVASVKEWAIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTTYEA 894

Query: 350  CVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGS 409
                SL +   +G                           G  +L  CLD F R E L  
Sbjct: 895  YTYLSLPVPHGRG--------------------------VGKVSLEQCLDAFVREEVLDK 928

Query: 410  DQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS--LD 467
               + C +C   +++ K++SI +LP +   H+KRF        + K+D  + FP +  +D
Sbjct: 929  ADMWNCPRCNKPRKATKRLSISRLPQILLIHLKRFSFKG--PFTDKIDTTVTFPTTTPMD 986

Query: 468  MAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLS 527
            +  Y+ + +          P  G   +    P   ++L+AV  H G L+ GHY   ++ S
Sbjct: 987  LTNYMPAPLP---------PGSGQVESGSQRPPYRYDLYAVTHHFGSLNTGHYTATVKSS 1037

Query: 528  NKWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
             +W+ CDD+ IT  ++  +     Y++++ +K
Sbjct: 1038 GEWWYCDDSRITRGDDRQLHTNSPYVLWFRRK 1069


>gi|346976858|gb|EGY20310.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
           VdLs.17]
          Length = 288

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 44/321 (13%)

Query: 251 LDTMFSAIFCGDRM-PYSPAKFLYSWW----RHASNLASYEQQDAHEFFISMLDGIHEKV 305
           +D MF   +  +    ++ A  L  +W    +   NL + ++QDAHEFF  + + +HE+ 
Sbjct: 1   MDDMFQDFYAVENTNGFTAASILSGFWISEKKAFENLVTTKEQDAHEFFQFLAEELHER- 59

Query: 306 EKDQHKPRSQGNGDC-CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP-NQGS 363
             D   P       C CI H+ F G L+S   C  CG  +      +D SL L+   Q  
Sbjct: 60  NGDGKPPEIGSEHSCNCIIHQTFYGKLQSTTTCQNCGGVTNAVQSFLDLSLGLDNLAQRR 119

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ-KFFCQQCQVRQ 422
           + KT   + +                   TL  CLD     E + SD+ ++ C  C   Q
Sbjct: 120 ARKTGQKQPS------------------LTLQECLDE----EYVKSDKCEYRCHNCDSTQ 157

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVR--KMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
           ++ +  SI++LP V    +KRFE    R  +   K+D  + FPL L+M PY         
Sbjct: 158 QARRNTSIKRLPNVLAIQLKRFEFKQGRHDRAPSKIDTTVNFPLQLNMLPYT-------- 209

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITE 540
             NR    D  ES  L   S  ++L +VV H G++D GHYV+Y R++++W+K +D  +  
Sbjct: 210 --NRAKGSDTKESFELAR-SCTYDLLSVVVHVGEIDTGHYVSYCRVADQWFKFNDHKVEM 266

Query: 541 VNENTVRAAQGYMMFYVQKML 561
            +++ V +AQ Y++FY+ + L
Sbjct: 267 ASKSDVLSAQPYLLFYIIRSL 287


>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
           guttata]
          Length = 358

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 87/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R+  L+ +      + K  +  CLA     +F +I 
Sbjct: 29  GLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQP---RKKENLLTCLA----DLFHSIA 81

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 82  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 141

Query: 317 --NG----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
             NG          D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 142 LPNGSVDSESSSPPDPTWVHEIFQGTLTNETRCLTCETVSSKDEDFLDLSVDVEQN---- 197

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 198 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 230

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 231 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 273

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 274 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 329

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 330 QAIEEFYGLTSDISKNSESGYILFY 354


>gi|193785704|dbj|BAG51139.1| unnamed protein product [Homo sapiens]
          Length = 356

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 49/301 (16%)

Query: 200 GLNNLGNTCFMNSVLQAL---------FHTPP---LRNYFLSDRHNRYYCQSKNGVRLCL 247
           GL NLGNTCFMN++LQ+L         F   P   LRN   + R   Y+ +S+    + L
Sbjct: 75  GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT-YHTRSQGDNNVSL 133

Query: 248 ACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK 307
             +      A++ G +  +SP    Y  W+   N   Y+QQDAHEF   +LD +H +++ 
Sbjct: 134 VEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQG 193

Query: 308 D----------QHKPRSQGNGDCCI------AHRVFSGILRSDVMCMACGFTSTTFDPCV 351
                      Q       +  CCI         +F GIL+++V C+ CG  S  FDP +
Sbjct: 194 GFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFL 253

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLD+ P+Q  S ++ + ++   C                +L  CL  FT  E L   +
Sbjct: 254 DLSLDI-PSQFRSKRSKNQENGPVC----------------SLRDCLRSFTDLEELDETE 296

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAP 470
            + C +C+ +Q+S K+  I+KLP V C H+KRF  ++   +  KVD Y++FPL  LDM  
Sbjct: 297 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY--LRNKVDTYVEFPLRGLDMKC 354

Query: 471 Y 471
           Y
Sbjct: 355 Y 355


>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
 gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
          Length = 637

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 155/361 (42%), Gaps = 65/361 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL+N GNTCF+NS LQ L HTPPL        H +  C+   G   C+AC L  + +  F
Sbjct: 123 GLHNTGNTCFLNSALQCLLHTPPLLRVL--SHHKQESCKVDRG--FCMACALRQVAAKSF 178

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
              R P++P++        A ++    Q+D HEF    +D + +           Q   +
Sbjct: 179 S-SRSPFAPSQITGRLQTIAKHMRKGRQEDTHEFLRYAIDALQKSCLAGYPPKIDQKLAE 237

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
               H++F G LRS V C  CG+ S TFD  +D SLD+             KS+      
Sbjct: 238 TTWVHKIFGGRLRSRVTCRDCGYNSDTFDRILDLSLDI------------LKSD------ 279

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                        T+   L +F   + L    K+ C++C+    + K+ +I   PLV   
Sbjct: 280 -------------TIKDALRKFVAIDYLKGADKYKCEKCKKPVTAEKRFTIHDAPLVLTV 326

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
           H+KRF       + RK+   + +   L + P++S       FG                 
Sbjct: 327 HLKRFS-----PLGRKIGHPVTYDDHLSLQPFMS----EGSFG----------------- 360

Query: 500 SSEFELFAVVTHT-GKLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+ V+ H  G   +GHY  +++  + KW++ +D  ++ +N   +     Y++FY+
Sbjct: 361 -PTYSLYGVICHAGGGPHSGHYYAFVKSRDGKWWEMNDEMVSPINGPPLSKKSAYVLFYM 419

Query: 558 Q 558
           +
Sbjct: 420 R 420


>gi|326914260|ref|XP_003203444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
           gallopavo]
          Length = 359

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 168/384 (43%), Gaps = 85/384 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R+  L+     Y  Q +    L L C  D   S   
Sbjct: 30  GLVNFGNTCYCNSVLQALYFCRPFRDKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 83

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 84  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 143

Query: 317 -NG----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            NG          D    H +F G L ++  C+ C   S+  +  +D S+D+E N     
Sbjct: 144 PNGNIDNENNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN----- 198

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                     +++  CL  F+  E L S+ K++C++C+ +QE+ 
Sbjct: 199 --------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 232

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           K+M ++KLP++   H+KRF++        K+   + FPL L                 R 
Sbjct: 233 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------RL 275

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
           F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++  
Sbjct: 276 FNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQ 331

Query: 545 TVR------------AAQGYMMFY 556
            +             +  GY++FY
Sbjct: 332 AIEEFYGLTSDISKNSESGYILFY 355


>gi|363729307|ref|XP_425636.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gallus gallus]
          Length = 354

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 168/384 (43%), Gaps = 85/384 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R+  L+     Y  Q +    L L C  D   S   
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFRDKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 78

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 79  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 138

Query: 317 -NG----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            NG          D    H +F G L ++  C+ C   S+  +  +D S+D+E N     
Sbjct: 139 PNGNIDNENNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN----- 193

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                     +++  CL  F+  E L S+ K++C++C+ +QE+ 
Sbjct: 194 --------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 227

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           K+M ++KLP++   H+KRF++        K+   + FPL L                 R 
Sbjct: 228 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------RL 270

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
           F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++  
Sbjct: 271 FNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQ 326

Query: 545 TVR------------AAQGYMMFY 556
            +             +  GY++FY
Sbjct: 327 AIEEFYGLTSDISKNSESGYILFY 350


>gi|449269690|gb|EMC80441.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Columba livia]
          Length = 353

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 168/384 (43%), Gaps = 85/384 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R+  L+     Y  Q +    L L C  D   S   
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFRDKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 77

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 78  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 137

Query: 317 -NG----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            NG          D    H +F G L ++  C+ C   S+  +  +D S+D+E N     
Sbjct: 138 PNGNIDNENKSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN----- 192

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
                                     +++  CL  F+  E L S+ K++C++C+ +QE+ 
Sbjct: 193 --------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 226

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRF 485
           K+M ++KLP++   H+KRF++        K+   + FPL L                 R 
Sbjct: 227 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------RL 269

Query: 486 FPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNEN 544
           F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++  
Sbjct: 270 FNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQ 325

Query: 545 TVR------------AAQGYMMFY 556
            +             +  GY++FY
Sbjct: 326 AIEEFYGLTSDISKNSESGYILFY 349


>gi|344297599|ref|XP_003420484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
           africana]
          Length = 529

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 161/371 (43%), Gaps = 73/371 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+G+TC++N+ LQ L +TPPL +Y LS  H     Q       C+ C +    +   
Sbjct: 77  GLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASCGQQG----YCVLCAMQDHITRAL 132

Query: 260 C--GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
              GD M   P+  L      A  L  ++Q+DAHEF +S LD + +   +     R    
Sbjct: 133 SHPGDVM--EPSHAL------ARGLHRHQQEDAHEFLMSTLDAVQKACLRSHRHLRGLSE 184

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  +  R+F G  RS + C  C   S TFDP +D +LD++  Q                
Sbjct: 185 -DTTLIRRIFGGYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQ---------------- 227

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                          ++   L++    E L  +  + C+ CQ +  + K +++   P   
Sbjct: 228 ---------------SVNQALEQLVTVEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF   S  K +++V    ++P SLD++  LS               DG       
Sbjct: 273 VLVLKRFSDLSGDKNAKQV----RYPASLDVSRCLSRQ-------------DGG------ 309

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMF 555
              + + L+AV+ H G     GHY++Y++  N KWY+ DDA ++  +   V + Q Y +F
Sbjct: 310 --PAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALF 367

Query: 556 YVQKMLYYKAS 566
           Y+ +    + S
Sbjct: 368 YIHQSELVRGS 378


>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
          Length = 662

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 156/369 (42%), Gaps = 65/369 (17%)

Query: 195 PRGLR---GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
           PR +R   GL N GNTCF+NS LQ L HTPPL +  L+  H R      +G   C+ C  
Sbjct: 101 PRDIRIGSGLYNQGNTCFLNSALQCLLHTPPLLHAVLN--HPRDCPAQDDG--FCITCSF 156

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK 311
             +    F      +SP+  L++  + A +L    Q+DAHEF   ++D + +     Q K
Sbjct: 157 RRVAQDSFKVKGNAFSPSPILHNLHKIAKSLRRGRQEDAHEFLRFLIDAMQKACLHGQPK 216

Query: 312 PRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
                  +     RVF G LRS V C +C   S TFD  +D SLD+              
Sbjct: 217 KVDPAVAEATWVSRVFGGKLRSRVRCCSCNHPSDTFDSILDLSLDI-------------- 262

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
                          QN   S++   L  F   + L    K+ C++C+    + KQ +I 
Sbjct: 263 ---------------QNA--SSVHQALKHFVAIDHLRGADKYKCEKCKKPVNAEKQFTID 305

Query: 432 KLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGD 491
             PL    H+KRF         RK+   +Q+   L +A                    G 
Sbjct: 306 SAPLALTVHLKRFT-----PFGRKLAHVVQYKEHLSLA--------------------GA 340

Query: 492 ESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAA 549
            S    E S +++L+ V+ H G   ++GHY  + +  N +WY+ +D  ++      +   
Sbjct: 341 MSKDAKEQSPQYKLYGVICHAGSGPNSGHYYAFTKGPNGRWYEMNDDAVSLQTRPPLDLK 400

Query: 550 QGYMMFYVQ 558
             YM+FY++
Sbjct: 401 SAYMLFYLR 409


>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Canis lupus familiaris]
          Length = 535

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 172/393 (43%), Gaps = 80/393 (20%)

Query: 181 ASPIDSMSSSNGDLP--------RGLR----GLNNLGNTCFMNSVLQALFHTPPLRNYFL 228
           +SP D ++ ++  LP        R L     GL N+GNTC++N+ LQ L +T PL +Y L
Sbjct: 50  SSPTDPLAPTSAGLPPTKTPLSWRSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYML 109

Query: 229 SDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQ 288
           S +H    C+ +     C+ C L    + + C       P + L       +    ++Q+
Sbjct: 110 SQQHGTT-CRRQTS---CMLCTLQAHLTRVLC------HPGRVLRPLPLLLAAFHRHKQE 159

Query: 289 DAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFD 348
           DAHE+ + +LD + +    +      +   D  +  ++F G  RS + C+ C   S+T +
Sbjct: 160 DAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLE 219

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLG 408
           P +D SLD+    G++   S                             L++  +PE L 
Sbjct: 220 PYLDISLDI----GAAHSISQA---------------------------LEQLMKPELLE 248

Query: 409 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDM 468
            +  + C +C  +  + K +++   P V    ++RF   +  KM+++V    Q+P  LDM
Sbjct: 249 GENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEV----QYPERLDM 304

Query: 469 APYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLS 527
             YLS          R  P               + L+AV+ H G+   +GHY  +++  
Sbjct: 305 QHYLSE--------QRAGPL-------------VYVLYAVLVHAGRSCHSGHYFCFVKAG 343

Query: 528 N-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           N +WYK DDA ++  +         Y++FY+QK
Sbjct: 344 NGQWYKMDDAKVSACDVTCALRQPAYVLFYMQK 376


>gi|323455492|gb|EGB11360.1| hypothetical protein AURANDRAFT_11968, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 170/391 (43%), Gaps = 56/391 (14%)

Query: 198 LRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGV---RLCLACDLDTM 254
           L GL NLGNTCF+N+ LQ L    PL   FL    +  Y    NG    +  +A     +
Sbjct: 1   LVGLTNLGNTCFLNAPLQCLLGVAPLVEVFL----DGSYAAMVNGASPSKGAIAHAFAEL 56

Query: 255 FSAIFCGD-RMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV-------- 305
              ++  +     SPAK      +HA     + Q D  E F  +LDG+ E +        
Sbjct: 57  VRDVYAAEPHSAVSPAKLKRVIGQHAPQFQGHSQHDCQELFRYLLDGLAEDLKLPPPPPP 116

Query: 306 -------EKDQHKPRSQGNGDCC-IAHR---------VFSGILRSDVMCMACGFTSTTFD 348
                  E +  +P +   G+    A+R          F G LRS V C +C   ST FD
Sbjct: 117 RPPEPGPETEDDEPAADDAGESSWAAYRRNNRSLVTDTFCGQLRSSVECCSCHHVSTCFD 176

Query: 349 PCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNS-SQNCGISTLMGCLDRFTRPERL 407
           P +D SL +        +        +   + +   + S+     TL  CL+ FT PE L
Sbjct: 177 PYLDISLPIPAAAAGGNEAGPDGRPRNAAGKGNPRGARSRLPNACTLEECLETFTEPEVL 236

Query: 408 GSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SL 466
               K  C++C   ++ +K ++I   P +   H+KRF ++SVR+   K+   + FP+  L
Sbjct: 237 EGGNKVTCERCGKLRKCVKWLTIHSWPKILVLHVKRFAYTSVRR--EKLATLVTFPVKGL 294

Query: 467 DMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLD-AGHYVTYLR 525
           D+  ++S    + R G    P               ++LFA   H G  + +GHYV    
Sbjct: 295 DLGNFIS----KERDGAAVKPV--------------YDLFATSDHLGDRETSGHYVANCA 336

Query: 526 LSNKWYKCDDAWITEVNENTVRAAQGYMMFY 556
           + + W++ +DA ++ V +  ++ A  Y++FY
Sbjct: 337 VGDAWHQFNDARVSPVTQEELQGAASYVLFY 367


>gi|351707914|gb|EHB10833.1| Ubiquitin carboxyl-terminal hydrolase 49 [Heterocephalus glaber]
          Length = 525

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 220/570 (38%), Gaps = 129/570 (22%)

Query: 44  CLHIKPPGGRAAIRRDSS----EVPRCGVCGDSSCPRLYACMACAAVSCHVPPHSSHVAI 99
           C H+    GR  + +D S    +  RC  C  +    ++AC+ C+ V+C       ++  
Sbjct: 4   CKHV----GRLRLAQDHSILNPQKWRCLECATTE--SVWACLKCSHVAC-----GRYIED 52

Query: 100 HATKTSSACSHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAHTTSIIQSSKPENLRKR 159
           HA +      H +A++V    +FC  C+D V + + +  + L                  
Sbjct: 53  HAREHFVETGHPLAMEVRDLYVFCYLCQDYVLNDNPEGDLKL------------------ 94

Query: 160 RRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFH 219
                      LR   L V                P G+ GL NLGNTC+MNS+LQ L H
Sbjct: 95  -----------LRSSLLAVRGQQQDQPPRRQPATAP-GVTGLRNLGNTCYMNSILQVLSH 142

Query: 220 TPPLRNYFLS--------------------------DRHNRYYCQSKNGVRLCLACDLDT 253
               R  FL+                           R +R     ++G  LC    +  
Sbjct: 143 LRKFRECFLNLDPCTTEHLFAQAAHRKARLSAPEPQARSDRAEACRRDG--LCWNGGVSL 200

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK-- 311
            F  ++ G     SP   L+S W        Y+QQDA EF   +L  + +++E +     
Sbjct: 201 TFRVMWSGRWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQELEAEGSTRR 260

Query: 312 ---PRSQ---GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
              P SQ         + + +F G L S V C++C + S T +P  D SL+  P +   +
Sbjct: 261 ILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIEPFWDLSLEF-PERYHCI 319

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ------ 419
           +      N +             C ++ ++    +FT  E L   + + C QC       
Sbjct: 320 EKGFVPLNQT------------ECLLTEMLA---KFTETEAL-EGRIYACDQCNSKRRKS 363

Query: 420 -----VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSS 474
                V  E+ KQ+ I  LP V   H+KRF  S  R    K+  ++ F   L M PY   
Sbjct: 364 NPKPLVLSEARKQLMIYTLPQVLRLHLKRFRWSG-RNHREKIGVHVAFEQVLTMEPYCCR 422

Query: 475 SILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNK--WY 531
            +L S                L++ +  ++L AVV H GK   +GHY  Y   +    W 
Sbjct: 423 DMLSS----------------LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWV 466

Query: 532 KCDDAWITEVNENTVRAAQGYMMFYVQKML 561
            C+D+ +   +   V   Q Y++FY Q+ +
Sbjct: 467 HCNDSKLNVCSVEEVCKTQAYILFYTQRTV 496


>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
 gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName:
           Full=Ubiquitin-specific-processing protease 12
 gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
 gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
          Length = 369

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 168/385 (43%), Gaps = 87/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKESLLTCLA----DLFHSIA 92

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 93  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152

Query: 317 --NG----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
             NG          D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 153 LPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 208

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 209 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 284

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 285 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 340

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 341 QAIEEFYGLTSDISKNSESGYILFY 365


>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
           domestica]
          Length = 376

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 46  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 99

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 100 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 159

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 160 PNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 215

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 216 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 248

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 249 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 291

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 292 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 347

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 348 QAIEEFYGLTSDISKNSESGYILFY 372


>gi|358253491|dbj|GAA53234.1| ubiquitin carboxyl-terminal hydrolase 22/27/51, partial [Clonorchis
           sinensis]
          Length = 523

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 116/229 (50%), Gaps = 23/229 (10%)

Query: 75  PR-LYACMACAAVSCHVPPHSSHVAIHATKTSSACSHEIAVDVDRAELFCCACRDQVYDR 133
           PR L AC  C   SC    H  H+ +H  +      H I + ++R EL+C  C D VY  
Sbjct: 306 PRCLLACTHCIHFSCW---HPRHLEVHRKERPE---HVIYICIERGELYCALCSDFVYHP 359

Query: 134 DFDAAVVLAHTTSIIQSSKPENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGD 193
             + +   AH   +              +    W P   E +L+ + +S +   +   G 
Sbjct: 360 VAEQSRKTAHRMYLAHFG----------LSSETWRPSFDELTLLPHISSVVPLSTKVGG- 408

Query: 194 LPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDT 253
             R  RGL N+GNTCF+N V+QAL HTP LR+Y L+D H    C +    R CLAC++  
Sbjct: 409 --RPTRGLVNMGNTCFLNVVIQALTHTPVLRDYLLADLHR---CNNPARSRSCLACEMIR 463

Query: 254 MFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIH 302
           +   I+     P+ P+  LY+ W HAS+LA YEQ+DAHEF I++L  IH
Sbjct: 464 VTQEIYSPVVTPFVPSNLLYAIWLHASHLAGYEQRDAHEFLITLLTLIH 512


>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
           rubripes]
 gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 372

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 95/414 (22%)

Query: 177 MVNNASPID-SMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
           M  NAS ++  + S    +     GL N GNTC+ NSVLQAL+   P R   L+ R    
Sbjct: 16  MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQP- 74

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDR----MPYSPAKFLYSWWRHASNLASYEQQDAH 291
             + K  +  CLA     +F +I    R    +P  P KF+    +      +Y QQDAH
Sbjct: 75  --RRKENLLTCLA----DLFHSIANQKRKVGVIP--PKKFITRLRKENELFDNYMQQDAH 126

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQG---NGDC-------------CIAHRVFSGILRSDV 335
           EF   +L+ I + +++++ + ++ G   NG                  H +F G L ++ 
Sbjct: 127 EFLNYLLNTIADLLQEERKQEKTNGRLANGTLDSQNNNSNATPAPTWVHEIFQGTLTNET 186

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S+  +  +D S+D+E N                               +++ 
Sbjct: 187 RCLTCETISSKDEDFLDLSVDVEQN-------------------------------TSIT 215

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F+  E L S+ K++C++C+ +QE+ K+M ++KLP++   H+KRF++    +   K
Sbjct: 216 HCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTK 275

Query: 456 VDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK- 514
           +   + FPL L                 R F   GD +N    P   ++L AVV H G  
Sbjct: 276 LSYRVVFPLEL-----------------RLFNTSGDATN----PERLYDLVAVVVHCGSG 314

Query: 515 LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMFY 556
            + GHY+  ++  + W   DD  + +++   +             +  GY++FY
Sbjct: 315 PNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 368


>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
           [Oreochromis niloticus]
 gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
           latipes]
          Length = 372

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 95/414 (22%)

Query: 177 MVNNASPID-SMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
           M  NAS ++  + S    +     GL N GNTC+ NSVLQAL+   P R   L+ R    
Sbjct: 16  MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQP- 74

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDR----MPYSPAKFLYSWWRHASNLASYEQQDAH 291
             + K  +  CLA     +F +I    R    +P  P KF+    +      +Y QQDAH
Sbjct: 75  --RRKENLLTCLA----DLFHSIANQKRKVGVIP--PKKFITRLRKENELFDNYMQQDAH 126

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQG---NGDC-------------CIAHRVFSGILRSDV 335
           EF   +L+ I + +++++ + ++ G   NG                  H +F G L ++ 
Sbjct: 127 EFLNYLLNTIADLLQEERKQEKTNGRLANGTLDSQNNNSNATPAPTWVHEIFQGTLTNET 186

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S+  +  +D S+D+E N                               +++ 
Sbjct: 187 RCLTCETISSKDEDFLDLSVDVEQN-------------------------------TSIT 215

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F+  E L S+ K++C++C+ +QE+ K+M ++KLP++   H+KRF++    +   K
Sbjct: 216 HCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTK 275

Query: 456 VDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK- 514
           +   + FPL L                 R F   GD +N    P   ++L AVV H G  
Sbjct: 276 LSYRVVFPLEL-----------------RLFNTSGDATN----PERLYDLVAVVVHCGSG 314

Query: 515 LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMFY 556
            + GHY+  ++  + W   DD  + +++   +             +  GY++FY
Sbjct: 315 PNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 368


>gi|50746997|ref|XP_420711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Gallus gallus]
 gi|449500647|ref|XP_002193246.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Taeniopygia
           guttata]
          Length = 366

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 165/385 (42%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   LS     Y  Q K    L L C  D   S   
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLS-----YKAQQKKKENL-LTCLADLFHSIAT 89

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   S  R  ++L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 90  QKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKL 149

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           +    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 150 KNGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQN---- 205

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+QK++C+ C  +QE+
Sbjct: 206 ---------------------------TSITHCLRDFSNTETLCSEQKYYCETCCSKQEA 238

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----------------R 281

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD  N        ++L AVV H G   + GHY+T ++    W   DD  + +++ 
Sbjct: 282 LFNTSGDAVNL----DRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDA 337

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 338 QAIEEFYGLTSDISKNSESGYILFY 362


>gi|353231357|emb|CCD77775.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
          Length = 563

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 180/433 (41%), Gaps = 104/433 (24%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GL GLNNLGNTCFMNS+LQ L +T PL  Y L DR  +   +S +   L      D M  
Sbjct: 160 GLVGLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADLM-K 218

Query: 257 AIFCGDRM--PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKP-- 312
            I+  D      SP++F     R A     Y QQD+ EF   +L+G+H +V + Q +P  
Sbjct: 219 EIWDPDMANSSTSPSRFKSQIQRFAPRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPNP 278

Query: 313 -RSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTK 371
            +     + C+   +F G L S + C  C F STTFDP  D SL +             K
Sbjct: 279 IKPDYEAEDCLP--LFVGQLMSTLECGECSFKSTTFDPFWDLSLPIP-----------KK 325

Query: 372 SNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIR 431
           SN S                  ++ CL+ FT  E L  +++  C +C+ R+   K  SI+
Sbjct: 326 SNVS------------------ILDCLNLFTSKEELDGNERPICSRCKTRRRCAKSFSIQ 367

Query: 432 KLPLVSC----------FHIKRFEHSSVRKMSRKVDR------YLQFPLSLDMAPYLSS- 474
           K P +            F+  +     +RK S +  R      Y ++ + +D     +S 
Sbjct: 368 KFPQILVLQFSKQMSRQFYCMQLRRGELRKTSSRRYRCLLTVVYTKYSIFVDQTLSATSY 427

Query: 475 --------SILRSRFGNRFFPFDGD----------------------------------- 491
                    +   +   +F+ + G                                    
Sbjct: 428 CGTGQTRFHVAEEKIRKKFWKWIGQTLSKSSNCITRQAVIWNPEGQRRRGRPKNTLHREM 487

Query: 492 -----ESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVNEN 544
                E N   + S++++L+AV  H+G +  GHY        +  W+  +D+ +  ++EN
Sbjct: 488 ETDMREMNKSTQKSAQYKLYAVSNHSGSVYTGHYTASCLNPYTGDWHSFNDSHVHAISEN 547

Query: 545 TVRAAQGYMMFYV 557
           +V +A+GY++FY 
Sbjct: 548 SVVSAEGYVLFYT 560


>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName:
           Full=Ubiquitin-specific-processing protease 12
 gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
          Length = 372

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 95/414 (22%)

Query: 177 MVNNASPID-SMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
           M  NAS ++  + S    +     GL N GNTC+ NSVLQAL+   P R   L+ R    
Sbjct: 16  MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQP- 74

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDR----MPYSPAKFLYSWWRHASNLASYEQQDAH 291
             + K  +  CLA     +F +I    R    +P  P KF+    +      +Y QQDAH
Sbjct: 75  --RRKENLLTCLA----DLFHSIANQKRKVGVIP--PKKFITRLRKENELFDNYMQQDAH 126

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQG---NGDC-------------CIAHRVFSGILRSDV 335
           EF   +L+ I + +++++ + ++ G   NG                  H +F G L ++ 
Sbjct: 127 EFLNYLLNTIADLLQEERKQDKTNGRLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNET 186

Query: 336 MCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLM 395
            C+ C   S+  +  +D S+D+E N                               +++ 
Sbjct: 187 RCLTCETISSKDEDFLDLSVDVEQN-------------------------------TSIT 215

Query: 396 GCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRK 455
            CL  F+  E L S+ K++C++C+ +QE+ K+M ++KLP++   H+KRF++    +   K
Sbjct: 216 HCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTK 275

Query: 456 VDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK- 514
           +   + FPL L                 R F   GD +N    P   ++L AVV H G  
Sbjct: 276 LSYRVVFPLEL-----------------RLFNTSGDATN----PERLYDLVAVVVHCGSG 314

Query: 515 LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMFY 556
            + GHY+  ++  + W   DD  + +++   +             +  GY++FY
Sbjct: 315 PNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 368


>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
 gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
          Length = 372

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 171/390 (43%), Gaps = 94/390 (24%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ R      + K  +  CLA     +F +I 
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQP---RRKENLLTCLA----DLFHSIA 92

Query: 260 CGDR----MPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
              R    +P  P KF+    +      +Y QQDAHEF   +L+ I + +++++ + ++ 
Sbjct: 93  NQKRKVGVIP--PKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTN 150

Query: 316 G---NGDC-------------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           G   NG                  H +F G L ++  C+ C   S+  +  +D S+D+E 
Sbjct: 151 GRLANGSLDSQNNNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ 210

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
           N                               +++  CL  F+  E L S+ K++C++C+
Sbjct: 211 N-------------------------------TSITHCLRGFSNTETLCSEYKYYCEECR 239

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRS 479
            +QE+ K+M ++KLP++   H+KRF++    +   K+   + FPL L             
Sbjct: 240 SKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLEL------------- 286

Query: 480 RFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWI 538
               R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  +
Sbjct: 287 ----RLFNTSGDATN----PERLYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIV 338

Query: 539 TEVNENTVR------------AAQGYMMFY 556
            +++   +             +  GY++FY
Sbjct: 339 EKIDAQAIEEFYGLTSEISKNSESGYILFY 368


>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
           africana]
          Length = 368

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 38  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 91

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 92  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 151

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 152 PNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 207

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 208 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 240

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 241 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 283

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 284 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 339

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 340 QAIEEFYGLTSDISKNSESGYILFY 364


>gi|259490298|ref|NP_001159183.1| uncharacterized protein LOC100304268 [Zea mays]
 gi|195627604|gb|ACG35632.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
 gi|223942511|gb|ACN25339.1| unknown [Zea mays]
 gi|414586948|tpg|DAA37519.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
           protein [Zea mays]
          Length = 368

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 168/421 (39%), Gaps = 101/421 (23%)

Query: 177 MVNNASPIDSMSSSNGDLPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           MV  AS      +     P G R  GL N GNTC+ NSVLQAL+   P R   L      
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLL-----E 55

Query: 235 YYCQSKN--GVRLCLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDA 290
           YY  +K    V   L   L  +F  I    +     +P +F+    +      SY  QDA
Sbjct: 56  YYANNKTPGDVEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDA 115

Query: 291 HEFFISMLDGIHEKVEKD---------QHKPRSQGNG-------------DCCIAHRVFS 328
           HEF   +L+ + + +EK+            P    NG                + H+ F 
Sbjct: 116 HEFLNFLLNELVDILEKESSAAKDSPQSSSPEKAPNGPVQPLANGVKKEPPVTLVHKNFQ 175

Query: 329 GILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQN 388
           GIL ++  C+ C   +   +  +D S+D+E N                            
Sbjct: 176 GILTNETRCLRCETVTARDETFLDLSVDIEQN---------------------------- 207

Query: 389 CGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS 448
              S++  CL  F   E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++  
Sbjct: 208 ---SSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIE 264

Query: 449 VRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAV 508
                +K+   + FP+ L +                        SNT ++  +E+ LFAV
Sbjct: 265 QLGRYKKLSYRVVFPMELKL------------------------SNTSDDVDTEYSLFAV 300

Query: 509 VTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMF 555
           V H G   + GHYV+ ++  N W   DD  +  V E T++               GY++F
Sbjct: 301 VVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGSSHEYSGNTDHGYILF 360

Query: 556 Y 556
           Y
Sbjct: 361 Y 361


>gi|347968815|ref|XP_312004.5| AGAP002900-PA [Anopheles gambiae str. PEST]
 gi|333467828|gb|EAA08027.5| AGAP002900-PA [Anopheles gambiae str. PEST]
          Length = 901

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 169/383 (44%), Gaps = 65/383 (16%)

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
           G + RGL GL NLGNTC+MNS+LQ L +T  L N F  D   + +    N  +  +  ++
Sbjct: 554 GSVGRGLTGLKNLGNTCYMNSILQCLSNTHFL-NEFFHDPSFKMHLNRNNKTQGKIGEEV 612

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK---- 307
             +  A++ G     +     Y   ++       EQQD+HEF   ++D +H  ++     
Sbjct: 613 AAVIKALWTGQYKCIASKNLRYVVGQYERQFGGIEQQDSHEFLTILMDWLHSDLQTKQMQ 672

Query: 308 ----DQHKPRSQG-----NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLE 358
               DQ  P  +       G       +F G ++S V C  C   S T++   + SL+L 
Sbjct: 673 VSALDQLPPSEKAWIEHFKGKDSYISELFYGQIKSTVKCTRCHKESATYESFSNLSLEL- 731

Query: 359 PNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQC 418
                                       Q+  I  L  CLD +   E +   + + C +C
Sbjct: 732 ---------------------------PQDSNICYLENCLDMYFNGEEV---RGWHCPKC 761

Query: 419 QVRQESLKQMSIRKLPLVSCFHIKRF--EHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSS 475
           +  Q+++K++ I +LP +   H KRF  +  ++  + RK    ++FPLS L+M  YL+ +
Sbjct: 762 KSNQDAIKKLDISRLPSILVVHFKRFYADPDTMATVYRKKQTLVKFPLSELNMTRYLART 821

Query: 476 ILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYL--RLSNKWYKC 533
            +      R   F              + L+ V  H G +++GHY  +    +  KW+K 
Sbjct: 822 EVNR--NKRLTTF-------------RYHLYGVSNHYGSMESGHYTAFCLNNIHQKWFKF 866

Query: 534 DDAWITEVNENTVRAAQGYMMFY 556
           DD  ++ ++ + V+A+  Y++FY
Sbjct: 867 DDYNVSSIDASDVQASAAYILFY 889


>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
           [Desmodus rotundus]
          Length = 374

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 44  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 97

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 98  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 157

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 158 PNGSVDSENNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 213

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 214 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 246

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 247 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 289

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 290 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 345

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 346 QAIEEFYGLTSDISKNSESGYILFY 370


>gi|195998045|ref|XP_002108891.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
 gi|190589667|gb|EDV29689.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
          Length = 333

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 168/379 (44%), Gaps = 91/379 (24%)

Query: 210 MNSVLQALFHTPPLRNYFLSDRH----NRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP 265
           MNS+LQ L ++ PL  YFL+  +    NR   ++  G+   +A +  T+  A +CG+   
Sbjct: 1   MNSILQCLINSVPLTKYFLTSTYRTDLNR---ENPLGMHGEVAEEFATIVHASWCGEYRY 57

Query: 266 YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEK------------------ 307
            SP  F  +  + A   A   Q D+ E  + +LDG+HE + +                  
Sbjct: 58  ISPTDFKLTMSKFADRFAGNSQHDSQELLMILLDGLHEDINRVKQKDYIEDDDTSHLPDE 117

Query: 308 -------DQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPN 360
                  D+HK R+Q      I   +F G  +S ++C+ C   S TF   ++ S+ L   
Sbjct: 118 EAANIAWDRHKRRNQS-----IIVELFQGQFKSTLVCLTCNKRSVTFQVFMNLSVPL--- 169

Query: 361 QGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQV 420
                       +H  +C              TL  CL+ F++ ER+  D K+FC +C+ 
Sbjct: 170 -----------PSHRSHC--------------TLNDCLELFSKAERVQGDNKWFCSKCKC 204

Query: 421 RQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSR 480
            +E++K++ I KLP V   H KRF  + +    +K D  + FP        ++   L+++
Sbjct: 205 YREAMKKLEIWKLPPVLLIHFKRFSGTGL--YWQKADTAVNFP--------VNGLTLKNQ 254

Query: 481 FGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWI 538
                         T+      + L+AV  H G L+ GHY  + +   + +WYK DD  +
Sbjct: 255 --------------TVGPKHRHYNLYAVSNHYGTLEGGHYTAFCQNPYAKEWYKFDDHIV 300

Query: 539 TEVNENTVRAAQGYMMFYV 557
           + ++ N V+ +  Y++FY 
Sbjct: 301 SRISSNDVKTSSAYILFYT 319


>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
           mutus]
          Length = 353

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 168/385 (43%), Gaps = 87/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKESLLTCLA----DLFHSIA 76

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 77  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 136

Query: 317 --NG----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
             NG          D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 137 LPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 192

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 193 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 225

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 226 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 268

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 269 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 324

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 325 QAIEEFYGLTSDISKNSESGYILFY 349


>gi|449471572|ref|XP_002196987.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Taeniopygia guttata]
          Length = 343

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 166/377 (44%), Gaps = 71/377 (18%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GL GL NL NTC+MN+VLQ L    PL  YFLS + N    Q          C    + S
Sbjct: 22  GLTGLQNLENTCYMNAVLQCLCSLTPLVQYFLSGKWNTDLHQEIGESATAFGC----LVS 77

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE------KDQH 310
            ++ G     SP  F   + +     +   Q DA EF I +LD +HE  +      +++ 
Sbjct: 78  DMWLGKFDYVSPEAFHSVFGKRYPAFSRRTQHDAQEFLICVLDDLHEAFKEVRAQLQERQ 137

Query: 311 KPRS-----QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSM 365
            P +       +G   I H +F G L   + C+ C    T  D    F++        S+
Sbjct: 138 SPAAGASTRSSSGTSIITH-LFEGQLSYGIRCLTC---KTLSDRPESFTI-------LSL 186

Query: 366 KTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESL 425
              ST+                   + +L  CL+ F +P+ L  + +  C +C   Q++ 
Sbjct: 187 PIPSTR-------------------VCSLQDCLECFFQPDTLTWNNQIRCHRCGSNQDAT 227

Query: 426 KQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFGNR 484
            + SI K P +  FH+KRF      K  RK+   + +P S LD++PY+S+S         
Sbjct: 228 VKASITKAPQIIIFHLKRFAWQD--KHRRKLSTTVCYPFSHLDLSPYISTSC-------- 277

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITEVN 542
                          ++E+ L AVV H G LD GHY  + +  ++  WY  DD  +T++ 
Sbjct: 278 -------------HNTTEYSLCAVVNHAGDLDYGHYTAFCKHSITKHWYSFDDDQVTKIP 324

Query: 543 ENTVRAAQGYMMFYVQK 559
           ++ V+A   Y++FY+ +
Sbjct: 325 DSAVQADTAYLLFYISQ 341


>gi|18400378|ref|NP_566486.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
 gi|75262798|sp|Q9FPS2.1|UBP25_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 25; AltName:
           Full=Deubiquitinating enzyme 25; Short=AtUBP25; AltName:
           Full=Ubiquitin thioesterase 25; AltName:
           Full=Ubiquitin-specific-processing protease 25
 gi|11993490|gb|AAG42763.1|AF302673_1 ubiquitin-specific protease 25 [Arabidopsis thaliana]
 gi|60543331|gb|AAX22263.1| At3g14400 [Arabidopsis thaliana]
 gi|332641992|gb|AEE75513.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
          Length = 661

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 167/364 (45%), Gaps = 63/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL--CLACDLDTMFSA 257
           GL NLGNTC++NSVLQ L  TPPL N+ L+ +H+ +     +G R   C  C ++   + 
Sbjct: 25  GLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIAR 84

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKPRS 314
               D    +P K        A +     Q+DAHEF   ++D  H    +++K ++    
Sbjct: 85  SLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGNE 144

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
             NG+  +   +F G L+S V C++CG  S   D  +D SL++   Q SS+K S      
Sbjct: 145 PFNGNSVVKE-IFGGALQSQVKCLSCGAESNKADEIMDISLEIL--QSSSVKES------ 195

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                                  L +F + E L  + K+ C+ C+    + KQMSI + P
Sbjct: 196 -----------------------LQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAP 232

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            +    +KRF          K+D+ + F   L ++ ++S +                   
Sbjct: 233 NILVIQLKRFGGI----FGGKIDKAISFGEILVLSNFMSKAS------------------ 270

Query: 495 TLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGY 552
              +P  E++LF ++ H+G   ++GHY  Y++ S  +WY C+D++++      V + + Y
Sbjct: 271 --KDPQPEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAY 328

Query: 553 MMFY 556
           ++F+
Sbjct: 329 ILFF 332


>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
           garnettii]
 gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
           caballus]
          Length = 370

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 93

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 94  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 153

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 154 PNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 209

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 210 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 285

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 286 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 341

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 342 QAIEEFYGLTSDISKNSESGYILFY 366


>gi|327281244|ref|XP_003225359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Anolis
           carolinensis]
          Length = 366

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 165/385 (42%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q K    L L C  D   S   
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLA-----YKAQQKKKENL-LTCLADLFHSIAT 89

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   S  R  ++L  +Y QQDAHEF   +L+ + + +++++ + +  G  
Sbjct: 90  QKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEEKKQEKQNGRL 149

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 150 RNGNMNETEENNKQDLTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQN---- 205

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+QK++C+ C  +QE+
Sbjct: 206 ---------------------------TSITHCLRDFSNTETLCSEQKYYCETCCSKQEA 238

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----------------R 281

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD  N        ++L AVV H G   + GHY+T ++    W   DD  + +++ 
Sbjct: 282 LFNTSGDAINL----DRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDA 337

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 338 QAIEEFYGLTSDISKNSESGYILFY 362


>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
           [Ailuropoda melanoleuca]
          Length = 354

 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 77

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 78  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 137

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 138 PNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 193

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 194 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 226

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 227 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 269

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 270 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 325

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 326 QAIEEFYGLTSDISKNSESGYILFY 350


>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
 gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
           Full=Deubiquitinating enzyme 12A; AltName:
           Full=Ubiquitin thioesterase 12A; AltName:
           Full=Ubiquitin-specific-processing protease 12A
 gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
          Length = 371

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 179/413 (43%), Gaps = 94/413 (22%)

Query: 177 MVNNASPID-SMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRY 235
           M  NAS ++  + S    +     GL N GNTC+ NSVLQAL+   P R   L+ R    
Sbjct: 16  MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQP- 74

Query: 236 YCQSKNGVRLCLACDLDTMFSAIFCGDR----MPYSPAKFLYSWWRHASNLASYEQQDAH 291
             + K  +  CLA     +F +I    R    +P  P KF+    +      +Y QQDAH
Sbjct: 75  --RRKENLLTCLA----DLFHSIANQKRKVGVIP--PKKFITRLRKENELFDNYMQQDAH 126

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQG---NG------------DCCIAHRVFSGILRSDVM 336
           EF   +L+ I + +++++ + +  G   NG                 H +F G L ++  
Sbjct: 127 EFLNYLLNTIADLLQEERKQDKQNGKLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETR 186

Query: 337 CMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
           C+ C   S+  +  +D S+D+E N                               +++  
Sbjct: 187 CLTCETISSKDEDFLDLSVDVEQN-------------------------------TSITH 215

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           CL  F+  E L S+ K++C++C+ +QE+ K+M ++KLP++   H+KRF++    +   K+
Sbjct: 216 CLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKL 275

Query: 457 DRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGK-L 515
              + FPL L                 R F   GD +N    P   ++L AVV H G   
Sbjct: 276 SYRVVFPLEL-----------------RLFNTSGDATN----PERLYDLVAVVVHCGSGP 314

Query: 516 DAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMMFY 556
           + GHY+  ++  + W   DD  + +++   +             +  GY++FY
Sbjct: 315 NRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 367


>gi|326527689|dbj|BAK08119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 366

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 169/405 (41%), Gaps = 103/405 (25%)

Query: 194 LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK---NGVRLCLA 248
            P G R  GL N GNTC+ NSVLQAL+   P R   L      YY  +K   +G    L 
Sbjct: 16  FPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLL-----EYYANNKSASDGEENMLT 70

Query: 249 CDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
           C L  +FS I    +     +P +F+    +      SY  QDAHEF   +L+ + + +E
Sbjct: 71  C-LADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILE 129

Query: 307 KD---QHKP--------------RSQGNG-----DCCIAHRVFSGILRSDVMCMACGFTS 344
           K+     +P                Q NG     D    H+ F GIL +   C+ C   +
Sbjct: 130 KECKANKEPSQNSSSNKNSNGPVNGQPNGSHKEPDTTWVHKCFQGILTNQTKCLRCETVT 189

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
              +  +D SLD+E N                               S++  CL  F+  
Sbjct: 190 DRDETFLDLSLDIEQN-------------------------------SSITSCLKNFSST 218

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   + FPL
Sbjct: 219 ETLNAEDKFFCDKCCSLQEAQKRMKIKKQPNILVIHLKRFKYIEQLGRYKKLTYRVVFPL 278

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTY 523
            L +                         NT++    E+ LFAV+ H G   + GHY++ 
Sbjct: 279 ELKLM------------------------NTVDNSDLEYSLFAVLVHVGSGPNHGHYISV 314

Query: 524 LRLSNKWYKCDDAWITEVNENTVR----AAQ--------GYMMFY 556
           ++  N W   DD  +   +E+ V+    +AQ        GY++FY
Sbjct: 315 VKSHNHWLFFDDETVEMTDESMVQTFFGSAQEFSGNTDNGYILFY 359


>gi|270005509|gb|EFA01957.1| hypothetical protein TcasGA2_TC007573 [Tribolium castaneum]
          Length = 366

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 163/387 (42%), Gaps = 88/387 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R     DR   Y  ++K      L C L  +F +I 
Sbjct: 32  GLVNFGNTCYSNSVLQALYFCKPFR-----DRVLEYKAKNKRTKETLLTC-LADLFHSIA 85

Query: 260 CGDRM--PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKP--- 312
              +     +P KF+    +      +Y QQDAHEF   +++ I E +  E+ Q+     
Sbjct: 86  TQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHISEIILAERQQNSTTNN 145

Query: 313 -RSQGNGDCCIA---------HRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
            +S+  G+   A         H +F GIL S+  C+ C   S+  +   D  +D+E N  
Sbjct: 146 IKSKATGENGTAHTTPEPTWVHEIFQGILTSETRCLNCENVSSKDEDFFDLQVDIEQN-- 203

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                                        +++  CL  F+  E L SD KF C  C   Q
Sbjct: 204 -----------------------------TSITHCLRCFSNTETLCSDNKFKCDNCSSYQ 234

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFG 482
           E+ K+M ++KLP++   H+KRF++        KV   + FPL L                
Sbjct: 235 EAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLEL---------------- 278

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSNKWYKCDDAWITEV 541
            R F    D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + ++
Sbjct: 279 -RLFNTSDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDQVDKI 333

Query: 542 NENTVR------------AAQGYMMFY 556
           + +T+             +  GY++FY
Sbjct: 334 DASTIEDFYGLTSDTQKSSETGYILFY 360


>gi|297274160|ref|XP_001117796.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Macaca
           mulatta]
          Length = 626

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 165/385 (42%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 296 GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKESL-LTCLADLFHSIAT 349

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 350 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 409

Query: 317 ------------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
                         D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 410 PNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 465

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 466 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 498

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 499 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 541

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 542 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 597

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 598 QAIEEFYGLTSDISKNSESGYILFY 622


>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
           caballus]
          Length = 414

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 84  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKENLLTCLA----DLFHSIA 136

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 137 TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 196

Query: 317 --NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 197 LPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 253

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 254 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 285

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 286 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 328

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 329 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 384

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 385 AQAIEEFYGLTSDISKNSESGYILFY 410


>gi|109514144|ref|XP_001067099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform 1
           [Rattus norvegicus]
 gi|392352299|ref|XP_003751173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Rattus
           norvegicus]
 gi|392354053|ref|XP_577055.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Rattus
           norvegicus]
          Length = 363

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 76/369 (20%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NS+LQAL+   P R+  L+ +      + K  +  CLA     +F +I 
Sbjct: 36  GLVNFGNTCYCNSILQALYFCRPFRDKVLAYKSQP---RKKESLLTCLA----DLFHSIA 88

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 89  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 148

Query: 317 --NGDC-----------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             NGD               H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 149 LRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 205

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 206 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 237

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 238 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 280

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 281 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 336

Query: 543 ENTVRAAQG 551
              +    G
Sbjct: 337 AQAIEEFYG 345


>gi|344297597|ref|XP_003420483.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Loxodonta africana]
          Length = 529

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 160/371 (43%), Gaps = 73/371 (19%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+G+TC+ N+ LQ L +TPPL +Y LS  H     Q       C+ C +    +   
Sbjct: 77  GLRNMGDTCYGNAALQCLTYTPPLADYMLSREHAASCGQQG----YCVLCAMQDHITRAL 132

Query: 260 C--GDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
              GD M   P+  L      A  L  ++Q+DAHEF +S LD + +   +     R    
Sbjct: 133 SHPGDVM--EPSHAL------ARGLHRHQQEDAHEFLMSALDAVQKACLRSHRHLRGLSE 184

Query: 318 GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCN 377
            D  +  R+F G  RS + C  C   S TFDP +D +LD++  Q                
Sbjct: 185 -DTTLIRRIFGGYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQ---------------- 227

Query: 378 CEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVS 437
                          ++   L++    E L  +  + C+ CQ +  + K +++   P   
Sbjct: 228 ---------------SVNQALEQLVTAEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272

Query: 438 CFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLN 497
              +KRF   S  K +++V    ++P SLD++  LS               DG       
Sbjct: 273 VLVLKRFSDLSGDKNAKQV----RYPASLDVSRCLSRQ-------------DGG------ 309

Query: 498 EPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMF 555
              + + L+AV+ H G     GHY++Y++  N KWY+ DDA ++  +   V + Q Y +F
Sbjct: 310 --PAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALF 367

Query: 556 YVQKMLYYKAS 566
           Y+ +    + S
Sbjct: 368 YIHQSELVRGS 378


>gi|357113662|ref|XP_003558620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
           [Brachypodium distachyon]
          Length = 366

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 171/405 (42%), Gaps = 103/405 (25%)

Query: 194 LPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSK---NGVRLCLA 248
            P G R  GL N GNTC+ NSVLQAL+   P R   L      YY  +K   +G    L 
Sbjct: 16  FPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLL-----EYYANNKGAGDGEENMLT 70

Query: 249 CDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVE 306
           C L  +FS I    +     +P +F+    +      SY  QDAHEF   +L+ + + +E
Sbjct: 71  C-LADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILE 129

Query: 307 KD----QHKPRS-------------QGNG-----DCCIAHRVFSGILRSDVMCMACGFTS 344
           K+    +  P++             Q NG     D    H+ F GIL +   C+ C   +
Sbjct: 130 KECNATKEPPQNSSLQKNSNGPINGQPNGSHRELDTTWVHKCFQGILTNQTRCLRCETVT 189

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
              +  +D SLD+E N                               S++  CL  F+  
Sbjct: 190 DRDETFLDLSLDIEQN-------------------------------SSITSCLKNFSST 218

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++       +K+   + FPL
Sbjct: 219 ETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPL 278

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTY 523
            L +                         NT++    E+ LFAV+ H G   + GHY++ 
Sbjct: 279 ELKLI------------------------NTVDNSDLEYSLFAVLVHVGSGPNHGHYISL 314

Query: 524 LRLSNKWYKCDDAWITEVNENTVR----AAQ--------GYMMFY 556
           ++  N W   DD  +   +E+ V+    +AQ        GY++FY
Sbjct: 315 VKSHNHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGYILFY 359


>gi|242076010|ref|XP_002447941.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
 gi|241939124|gb|EES12269.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
          Length = 368

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 169/422 (40%), Gaps = 103/422 (24%)

Query: 177 MVNNASPIDSMSSSNGDLPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           MV  AS      +     P G R  GL N GNTC+ NSVLQAL+   P R   L      
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLL-----E 55

Query: 235 YYCQSK---NGVRLCLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQD 289
           YY  +K   +     L C L  +F  I    +     +P +F+    +      SY  QD
Sbjct: 56  YYANNKTPGDAEENLLTC-LADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQD 114

Query: 290 AHEFFISMLDGIHEKVEKDQ---------HKPRSQGNG-------------DCCIAHRVF 327
           AHEF   +L+ + + +EK+            P    NG                + H+ F
Sbjct: 115 AHEFLNFLLNELVDILEKESSAAKDSPQLSSPEKAPNGPVQPLANGVKKEPPVTLVHKNF 174

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            GIL ++  C+ C   +   +  +D S+D+E N                           
Sbjct: 175 QGILTNETRCLRCETVTARDETFLDLSVDIEQN--------------------------- 207

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
               S++  CL  F   E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++ 
Sbjct: 208 ----SSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYI 263

Query: 448 SVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFA 507
                 +K+   + FP+ L +                        SNT ++  +E+ LFA
Sbjct: 264 EQLGRYKKLSYRVVFPMELKL------------------------SNTSDDVDTEYSLFA 299

Query: 508 VVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMM 554
           VV H G   + GHYV+ ++  N W   DD  +  V E T++               GY++
Sbjct: 300 VVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGSSHEYSGNTDHGYIL 359

Query: 555 FY 556
           FY
Sbjct: 360 FY 361


>gi|359321530|ref|XP_851647.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
           2-like [Canis lupus familiaris]
          Length = 535

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 185/426 (43%), Gaps = 82/426 (19%)

Query: 150 SSKPENLRKRRRIDYRPWSPDLRERSLMVNN--ASPIDSMSSSNGDLP--------RGLR 199
           S KP++   RR        P + E +   +   +SP D ++ ++  LP        + L 
Sbjct: 17  SPKPQSCWSRRGGAEVHGGPSVPETTSPASKTLSSPTDLLAPASAGLPPTKTPLSWKSLS 76

Query: 200 ----GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
               GL N+GNTC++N+ LQ L +T PL +Y LS +H    C+ +     C+ C L    
Sbjct: 77  QVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTT-CRRQTS---CMLCTLQAHL 132

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + + C       P + L       +    ++Q+DAHE+ + +LD + +    +      +
Sbjct: 133 TRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPE 186

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D  +  ++F G  RS + C+ C   S+T +P +D SLD+                  
Sbjct: 187 RPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDI------------------ 228

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                D  + SQ          L++  +PE L  +  + C +C  +  + K +++   P 
Sbjct: 229 ----GDAHSVSQ---------ALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPK 275

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    ++RF + +  KM+++V    Q+P  LD+  YLS          R  P        
Sbjct: 276 VLILVLRRFSNLTGNKMTKEV----QYPERLDLQHYLSE--------QRAGPL------- 316

Query: 496 LNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ H G+   +GHY  +++  N +WYK DDA ++  +         Y+
Sbjct: 317 ------VYVLYAVLVHAGRSCHSGHYFCFIKAGNGQWYKMDDAKVSSCDVICALRQPAYV 370

Query: 554 MFYVQK 559
           +FY+QK
Sbjct: 371 LFYMQK 376


>gi|327281639|ref|XP_003225554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
           carolinensis]
          Length = 370

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 168/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKESLLTCLA----DLFHSIA 92

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ + + +++++ + +  G 
Sbjct: 93  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGR 152

Query: 317 --NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 153 LPNGCIDSENNNSLPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 209

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 210 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 241

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 242 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 284

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 285 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 340

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 341 AQAIEEFYGLTSDISKNSESGYILFY 366


>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
           [Oryctolagus cuniculus]
          Length = 475

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 145 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKESLLTCLA----DLFHSIA 197

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 198 TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 257

Query: 317 --NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 258 LPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 314

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 315 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 346

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 347 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 389

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 390 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 445

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 446 AQAIEEFYGLTSDISKNSESGYILFY 471


>gi|403255383|ref|XP_003920416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Saimiri
           boliviensis boliviensis]
          Length = 413

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 165/385 (42%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 83  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKESL-LTCLADLFHSIAT 136

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 137 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 196

Query: 317 ------------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
                         D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 197 PNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 252

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 253 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 285

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 286 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 328

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++ 
Sbjct: 329 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDA 384

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 385 QAIEEFYGLTSDISKNSESGYILFY 409


>gi|357463327|ref|XP_003601945.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355490993|gb|AES72196.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 366

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 165/398 (41%), Gaps = 102/398 (25%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKN---GVRLCLACDLDTMFS 256
           GL N GNTC+ NSVLQAL+   P R   L     +YY ++KN        L C L  +FS
Sbjct: 24  GLENFGNTCYCNSVLQALYFCVPFREQLL-----QYYGKNKNITDAEENLLTC-LAELFS 77

Query: 257 AIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPR- 313
            I    R     +P +F+    +      SY  QDAHEF   +L+ + + +E++ H  + 
Sbjct: 78  QISSQKRKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVDILEREAHAEKD 137

Query: 314 SQG-----------------NGD-----CCIAHRVFSGILRSDVMCMACGFTSTTFDPCV 351
            QG                 NG          H+ F GIL ++  C+ C   +   +   
Sbjct: 138 DQGTLLPSEKIANGPKSGLANGAKKAPLATWVHKNFQGILTNETRCLQCETVTARDETFF 197

Query: 352 DFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQ 411
           D SLD+E N                               S++  CL  F+  E L ++ 
Sbjct: 198 DLSLDIEQN-------------------------------SSITSCLKNFSSTETLNAED 226

Query: 412 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPY 471
           KFFC +C   QE+ K+M I++ P V   H+KRF++       +K+   + FPL L ++  
Sbjct: 227 KFFCDKCCSLQEAQKRMKIKRPPRVLVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLS-- 284

Query: 472 LSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSNKW 530
                            D DE     E   E+ LFAVV H G   + GHYV  ++  N W
Sbjct: 285 -----------------DTDE-----EADIEYSLFAVVVHVGSGPNHGHYVCLVKNHNHW 322

Query: 531 YKCDDAWITEVNENTVR------------AAQGYMMFY 556
              DD  +  V+E +V+               GY++FY
Sbjct: 323 LCFDDETVEVVDEASVQTFFGSTQDFNNNTDHGYILFY 360


>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
           familiaris]
          Length = 370

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C  D   S   
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTCLADLFHSIAT 93

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   +  R  + L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 94  QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRL 153

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 154 PNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN---- 209

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+ K++C++C+ +QE+
Sbjct: 210 ---------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP++   H+KRF++        K+   + FPL L                 R
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----------------R 285

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F   GD +N    P   ++L AVV H G   + GHY+  ++    W   DD  + +++ 
Sbjct: 286 LFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHEFWLLFDDDIVEKIDA 341

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 342 QAIEEFYGLTSDISKNSESGYILFY 366


>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
           norvegicus]
          Length = 504

 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 176/397 (44%), Gaps = 68/397 (17%)

Query: 166 PWSPDL-RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L ++ + ++   S     S S   L R   GL N+GN+C++N+VLQ L HTPPL 
Sbjct: 17  PATPELHQDEAQVLEELSAKGKPSLSLQRLQRPGSGLQNIGNSCYLNAVLQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLAS 284
           +Y LS  H++  C  + G  +C A +     S +         P++ L S +        
Sbjct: 77  DYMLSQEHSQRCCYPE-GCNMC-AMEAHVTQSLLHSHSGGVMKPSEILTSTFH------K 128

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTS 344
           + Q+DAHEF +  L+ +HE   +   +  +    D  + + +F G +RS + C  C  T 
Sbjct: 129 HRQEDAHEFLMFTLNTMHESCLRGCKQSETTSK-DSSLIYDIFGGQMRSQIKCHHCQGTL 187

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
            ++DP ++  LD+                               C   ++   L+   + 
Sbjct: 188 DSYDPFLNLFLDI-------------------------------CSAQSVKQALEDLVKV 216

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L  D  ++C +C+ +  + K   ++    V    + R    S      K++R + +P 
Sbjct: 217 EELQGDNAYYCGRCREKMPASKTTKVQTASKVLLLVLNR----SYDFGGDKLNRVVSYPE 272

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTY 523
            LD+ PYLS             P  G            + L+AV+ H G    +GHY  Y
Sbjct: 273 YLDLQPYLSQ------------PTAG---------PLPYALYAVLVHDGVTCSSGHYFCY 311

Query: 524 LRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++ S+ KWYK DD+ +T  + ++V +   Y++FYVQ+
Sbjct: 312 VKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQQ 348


>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
           norvegicus]
          Length = 504

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 176/397 (44%), Gaps = 68/397 (17%)

Query: 166 PWSPDL-RERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLR 224
           P +P+L ++ + ++   S     S S   L R   GL N+GN+C++N+VLQ L HTPPL 
Sbjct: 17  PATPELHQDEAQVLEELSAKGKPSLSLQRLQRPGSGLQNIGNSCYLNAVLQCLTHTPPLA 76

Query: 225 NYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLAS 284
           +Y LS  H++  C  + G  +C A +     S +         P++ L S +        
Sbjct: 77  DYMLSQEHSQRCCYPE-GCNMC-AMEAHVTQSLLHSHSGGVMKPSEILTSTFH------K 128

Query: 285 YEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGDCCIAHRVFSGILRSDVMCMACGFTS 344
           + Q+DAHEF +  L+ +HE   +   +  +    D  + + +F G +RS + C  C  T 
Sbjct: 129 HRQEDAHEFLMFTLNTMHESCLRGCKQSETTSK-DSSLIYDIFGGQMRSQIKCHHCQGTL 187

Query: 345 TTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRP 404
            ++DP ++  LD+                               C   ++   L+   + 
Sbjct: 188 DSYDPFLNLFLDI-------------------------------CSAQSVKQALEDLVKV 216

Query: 405 ERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL 464
           E L  D  ++C +C+ +  + K   ++    V    + R    S      K++R + +P 
Sbjct: 217 EELQGDNAYYCGRCREKMPASKTTKVQTASKVLLLVLNR----SYDFGGDKLNRVVSYPE 272

Query: 465 SLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTY 523
            LD+ PYLS             P  G            + L+AV+ H G    +GHY  Y
Sbjct: 273 YLDLQPYLSQ------------PTAG---------PLPYALYAVLVHDGVTCSSGHYFCY 311

Query: 524 LRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYVQK 559
           ++ S+ KWYK DD+ +T  + ++V +   Y++FYVQ+
Sbjct: 312 VKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQQ 348


>gi|350421826|ref|XP_003492969.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
           impatiens]
          Length = 875

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 63/370 (17%)

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
           G  P G  G+ N+GNTC++NS LQALFH P L N+ LSD H+   C+  +G   CL C +
Sbjct: 118 GTFPVGA-GMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGGECLTCAV 176

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHA-SNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
                +          P  ++Y+  +     +   +Q+DAHEF   +L+G+ EK    +H
Sbjct: 177 AKTLQSSHQKSGCAIKPF-YIYNKLKLICRTMVPGQQEDAHEFLRYLLEGM-EKAYLARH 234

Query: 311 KPRSQG--NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
           K       + +    +++F G +R++V C+ C   STTF    D  +D+           
Sbjct: 235 KASKLDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRK--------- 285

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  STL   L  +   E+L ++  + C+ C+ R  + KQ 
Sbjct: 286 ----------------------ASTLDEALSSYFSREQLDNND-YKCEACKRRVPATKQF 322

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           S+ + P V C  +KRF   SV  +  K+ +++ F  ++DM PYL             +  
Sbjct: 323 SLERPPKVLCVQLKRF---SV--LGGKISKHIGFKQTIDMGPYL-------------WKE 364

Query: 489 DGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTV 546
            G+ + +L      ++L ++VTH G  ++ GHY    ++S  ++Y  DD+ +  ++ + V
Sbjct: 365 PGEPTQSLT-----YKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSLSNV 419

Query: 547 RAAQGYMMFY 556
            +   Y+M +
Sbjct: 420 FSTNAYIMIF 429


>gi|324501641|gb|ADY40728.1| Ubiquitin carboxyl-terminal hydrolase 3 [Ascaris suum]
          Length = 750

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 195/484 (40%), Gaps = 115/484 (23%)

Query: 153 PENLRKRRRIDYRPWSPDLRERSLMVNNASPIDSMSSSNGDLPRGLRGLNNLGNTCFMNS 212
           P  LRKR+R +     P     + M+     + +++       + LRGL NLGN+CFMNS
Sbjct: 302 PRTLRKRKRKE----DPSQESTTSMLCIMPAVKAITVEE----KKLRGLKNLGNSCFMNS 353

Query: 213 VLQALFHTPPLRNYF---------------LSDRHNRYYCQS--------KNGVRLCLAC 249
           VLQAL      R +                +  R  RY  +S        K   +  ++ 
Sbjct: 354 VLQALNSVQMFRYFICSLPPLEVDDVVGGGIETRTPRYNTRSSMPLLTADKRPAQAFISE 413

Query: 250 DLDTMFSAIFCGDRM------PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE 303
           +L    + I  G          + P   L  + + A     ++Q DAHEF   +LD +H 
Sbjct: 414 ELRKTLNEIGSGTGASGGAVNAFGPEGLLMEFCKVAPRFRGFQQHDAHEFLRCLLDRMHV 473

Query: 304 KVEK--------------------------DQHKPRSQGNGDCCIAHRVFSGILRSDVMC 337
           +++                            + + R  G    C    +F G L+S V C
Sbjct: 474 ELKSCRIPDWLLSEICDGGVRLGTRSHFLTSKRRSRMSGCERACAISAMFEGTLQSQVTC 533

Query: 338 MACGFTSTTFDPCVDFSLDL-EPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMG 396
           ++C   S   DP +D SLD+  P+ GS                          G   L+ 
Sbjct: 534 LSCSACSNKHDPFLDLSLDIYVPSSGS------------------------RAGTVRLVD 569

Query: 397 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 456
           C+ RF   E L S +++ C  C+ ++ S KQ+ ++ LP + C H+KRF  S+      K+
Sbjct: 570 CMRRFFAKEELDSREQYTCNNCEEKRPSTKQLFVKTLPNILCLHLKRFRWSNSSHRG-KL 628

Query: 457 DRYLQFPLS-LDMAPYL-----------SSSILRSRFGNR---------FFPFDGDESNT 495
           D  + FPL+ LDM  ++           S+S   S    R               D+ NT
Sbjct: 629 DNMVDFPLTALDMKSFMIHEESDATIANSTSDPGSMTAERRSNSCSSCLSSNGSNDDCNT 688

Query: 496 LNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSNKWYKCDDAWITEVNENTVRAAQGYMMF 555
           + + SS      VV H   + +GHY  Y R  N WY  +D+ +   +E +V   + Y++F
Sbjct: 689 IYDLSS-----LVVHHGSGVSSGHYTCYGRHGNHWYHFNDSSVKSCSEQSVAKQKAYILF 743

Query: 556 YVQK 559
           Y+++
Sbjct: 744 YMRR 747


>gi|328708865|ref|XP_003243820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
           [Acyrthosiphon pisum]
          Length = 792

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 170/380 (44%), Gaps = 76/380 (20%)

Query: 197 GLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFS 256
           GLRGL NLGNTC+MNS+LQ L  T  L  YF++   N  +   K+  +  +A +   +  
Sbjct: 471 GLRGLQNLGNTCYMNSILQCLSSTEDLVKYFINIYSN--FTNYKSRTKGLVAKEFSNVIK 528

Query: 257 AIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHK----- 311
            ++      +   +F  +   +      Y+QQD+HEF   +LD +H+ + + +       
Sbjct: 529 NLWSQSGRGFQSQQFKDTIGEYKDMFKHYDQQDSHEFLTILLDWLHDDLNQPEDNRVILG 588

Query: 312 -PRSQGNGDC--------CIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQG 362
             +  G  D          I  ++F G  +S V C  C   S TF+P +  SL L P++G
Sbjct: 589 ASKETGEEDWGNWTKANNSIIQQLFYGQQKSTVSCDTCFEKSVTFEPFLSLSLPL-PSEG 647

Query: 363 SSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQ 422
                      + C                TL  CL  +   E +     + C +C+  +
Sbjct: 648 -----------NKC----------------TLSDCLQLYLNGESICG---WHCPKCKRNR 677

Query: 423 ESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFP-LSLDMAPYLSSSILRSRF 481
           ++ K++ I +LP     H+KRF  +  +K S      ++FP ++LDM+ ++         
Sbjct: 678 DATKKLDIMRLPPYLIIHLKRFSSNGYKKNSN-----VEFPKMNLDMSNFI--------- 723

Query: 482 GNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVT--YLRLSNKWYKCDDAWIT 539
                       N L   + ++ L+ V  H+G LD GHY    +    NKWYK DD  + 
Sbjct: 724 ------------NGLEHRNWKYYLYGVSNHSGSLDGGHYTASCFKNSINKWYKFDDVRVY 771

Query: 540 EVNENTVRAAQGYMMFYVQK 559
           E++ +T+ + + Y++FY +K
Sbjct: 772 EIDSSTICSPEAYILFYRRK 791


>gi|326504080|dbj|BAK02826.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 370

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 169/422 (40%), Gaps = 103/422 (24%)

Query: 177 MVNNASPIDSMSSSNGDLPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           MV  AS      +     P G R  GL N GNTC+ NSVLQAL+   P R   L      
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCTPFREQLL-----E 55

Query: 235 YYCQSKN---GVRLCLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQD 289
           YY  +KN        L C L  +F  +    +     +P +F+    +      SY  QD
Sbjct: 56  YYTNNKNPGDAEENLLTC-LADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQD 114

Query: 290 AHEFFISMLDGIHEKVEKD---------QHKPRSQGNG-------------DCCIAHRVF 327
           AHEF   +L+ + + +EK+            P    NG                + H+ F
Sbjct: 115 AHEFLNFLLNELVDILEKESSAAKDSPQSSSPEKVPNGPVQPLANGVKKEPPVTLVHKNF 174

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            GIL ++  C+ C   +   +   D S+D+E N                           
Sbjct: 175 QGILTNETKCLRCETVTARDETFFDLSVDIEQN--------------------------- 207

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
               S++  CL  F+  E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++ 
Sbjct: 208 ----SSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYI 263

Query: 448 SVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFA 507
                 +K+   + FP+ L M                         +T ++  +E+ LFA
Sbjct: 264 EQLGRYKKLSYRVVFPMELKMG------------------------STSDDVDTEYSLFA 299

Query: 508 VVTHTGKL-DAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMM 554
           VV H G   + GHYV+ ++  N W   DD  +  V E+T++               GY++
Sbjct: 300 VVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGYIL 359

Query: 555 FY 556
           FY
Sbjct: 360 FY 361


>gi|340716721|ref|XP_003396843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
           terrestris]
          Length = 875

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 63/370 (17%)

Query: 192 GDLPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDL 251
           G  P G  G+ N+GNTC++NS LQALFH P L N+ LSD H+   C+  +G   CL C +
Sbjct: 118 GTFPVGA-GMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGGECLTCAV 176

Query: 252 DTMFSAIFCGDRMPYSPAKFLYSWWRHA-SNLASYEQQDAHEFFISMLDGIHEKVEKDQH 310
                +          P  ++Y+  +     +   +Q+DAHEF   +L+G+ EK    +H
Sbjct: 177 AKTLQSSHQKSGCAIKPF-YIYNKLKLICRTMVPGQQEDAHEFLRYLLEGM-EKAYLARH 234

Query: 311 KPRSQG--NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
           K       + +    +++F G +R++V C+ C   STTF    D  +D+           
Sbjct: 235 KASKLDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRK--------- 285

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  STL   L  +   E+L ++  + C+ C+ R  + KQ 
Sbjct: 286 ----------------------ASTLDEALSSYFSREQLDNND-YKCEACKRRVPATKQF 322

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
           S+ + P V C  +KRF   SV  +  K+ +++ F  ++DM PYL             +  
Sbjct: 323 SLERPPKVLCVQLKRF---SV--LGGKISKHIGFKQTIDMGPYL-------------WKE 364

Query: 489 DGDESNTLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTV 546
            G+ + +L      ++L ++VTH G  ++ GHY    ++S  ++Y  DD+ +  ++ + V
Sbjct: 365 PGEPTQSLT-----YKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSLSNV 419

Query: 547 RAAQGYMMFY 556
            +   Y+M +
Sbjct: 420 FSTNAYIMIF 429


>gi|195624860|gb|ACG34260.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
          Length = 368

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 169/422 (40%), Gaps = 103/422 (24%)

Query: 177 MVNNASPIDSMSSSNGDLPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           MV  AS      +     P G R  GL N GNTC+ NSVLQAL+   P R   L      
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLL-----E 55

Query: 235 YYCQSK---NGVRLCLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQD 289
           YY  +K   +     L C L  +F  I    +     +P +F+    +      SY  QD
Sbjct: 56  YYANNKTPGDAEENLLTC-LADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQD 114

Query: 290 AHEFFISMLDGIHEKVEKD---------QHKPRSQGNG-------------DCCIAHRVF 327
           AHEF   +L+ + + +EK+            P    NG                + H+ F
Sbjct: 115 AHEFLNFLLNELVDILEKESSAAKDSPQSSSPEKAPNGPVQPLANGVKKEPPVTLVHKSF 174

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            GIL ++  C+ C   +   +  +D S+D+E N                           
Sbjct: 175 QGILTNETRCLRCETVTARDETFLDLSVDIEQN--------------------------- 207

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
               S++  CL  F   E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++ 
Sbjct: 208 ----SSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKTPHILVIHLKRFKYI 263

Query: 448 SVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFA 507
                 +K+   + FP+ L +                        SN+ ++  +E+ LFA
Sbjct: 264 EQLGRYKKLSYRVVFPMELKL------------------------SNSSDDVDTEYSLFA 299

Query: 508 VVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMM 554
           VV H G   + GHYV+ ++  N W   DD  +  V E T++               GY++
Sbjct: 300 VVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGTSHEYSGNTDHGYIL 359

Query: 555 FY 556
           FY
Sbjct: 360 FY 361


>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
           max]
          Length = 938

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 69/366 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GN+C+ N+VLQ L +T PL +Y     H++  CQ K     C  C+ + +     
Sbjct: 415 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKR-CQKKG---WCFTCEFEYLIQKAK 470

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
            G   P SP   L    +  S+L    ++DAHEF   ++D +     K+           
Sbjct: 471 EGIS-PLSPIGILSKIHKIGSHLGRGREEDAHEFLRCVVDTMQSICLKEVGVSSPLAEET 529

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             +++  F G LRS + C+ C   S  ++  +D +++++ +                   
Sbjct: 530 TLVSY-TFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGD------------------- 569

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                      I TL   L +FT PE L  D K+ C +C+   ++ K++++ + P +   
Sbjct: 570 -----------IGTLEEALGQFTAPEILDKDNKYNCSRCKTYVKARKKLTVLEAPNILTI 618

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            +KRF+  +  K+++ V    QFP  L+MAPY+S +                      + 
Sbjct: 619 VLKRFQSGNFEKLNKSV----QFPEVLNMAPYMSGT---------------------KDK 653

Query: 500 SSEFELFAVVTHTGKLD------AGHYVTYLR-LSNKWYKCDDAWITEVNENTVRAAQGY 552
           S  + L+AVV H   LD      +GHYV Y++ +  +W++ DD+ +  V  + V + + Y
Sbjct: 654 SPLYSLYAVVVHL-DLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAY 712

Query: 553 MMFYVQ 558
           M+ Y +
Sbjct: 713 MLLYAR 718


>gi|402874299|ref|XP_003900979.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Papio anubis]
          Length = 373

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 171/389 (43%), Gaps = 76/389 (19%)

Query: 187 MSSSNGDLP--RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           +  ++G  P  +G+ GL NLGNTC+MN++LQ L    PL  YFLS    +Y    +N   
Sbjct: 30  VKEADGSQPCSQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLS---GKYITALQNDCS 86

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
             +A     + + ++ GD    SP  F  +            QQDA EF I +L+ +HE 
Sbjct: 87  E-VATAFAYLMTDMWLGDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEA 145

Query: 305 VEKDQHKPRSQGNGD-----CC---------IAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           ++K  H PR + +       CC         +  ++F G L   ++C+ C       + C
Sbjct: 146 LKK-YHYPRRRSHEKGPAQRCCRKWITTETSVITQLFEGQLNYSIVCLKC-------EKC 197

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
                    N+  ++ +    S + C                +L  CL  F + + L  +
Sbjct: 198 T------YKNEVFTVLSLPIPSEYEC----------------SLQDCLQCFFQQDTLTWN 235

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMA 469
            +  C  C+ +QE+  +  I K P +  FH+KRF+    R   RK+   + +PL+ LD+ 
Sbjct: 236 NQIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQ--RTTKRKLRTDIHYPLTNLDLT 293

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LS 527
           PY+           R +P              ++ L AVV H G LD GHY  + +   +
Sbjct: 294 PYICPIF-------RKYP--------------KYNLCAVVNHFGDLDGGHYTAFCKNSFT 332

Query: 528 NKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             WY  DD  ++E+ + +V+ A  Y++FY
Sbjct: 333 QAWYSFDDTRVSEIPDTSVQNATAYLLFY 361


>gi|297296433|ref|XP_001107612.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Macaca mulatta]
 gi|75076336|sp|Q4R6D3.1|UBP50_MACFA RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 50;
           AltName: Full=Deubiquitinating enzyme 50; AltName:
           Full=Ubiquitin thioesterase 50; AltName:
           Full=Ubiquitin-specific-processing protease 50
 gi|67969991|dbj|BAE01342.1| unnamed protein product [Macaca fascicularis]
          Length = 373

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 76/389 (19%)

Query: 187 MSSSNGDLP--RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVR 244
           +  ++G  P  +G+ GL NLGNTC+MN++LQ L    PL  YFLS    +Y    +N   
Sbjct: 30  VKEADGSQPCSQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLS---GKYITALQNDCS 86

Query: 245 LCLACDLDTMFSAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEK 304
             +A     + + ++ GD    SP  F  +            QQDA EF I +L+ +HE 
Sbjct: 87  E-VATAFAYLMTDMWLGDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEA 145

Query: 305 VEKDQHKPR----SQGNGD-CC---------IAHRVFSGILRSDVMCMACGFTSTTFDPC 350
           ++K  H PR     +G+   CC         +  ++F G L   ++C+ C       + C
Sbjct: 146 LKK-YHYPRRRSHEKGSAQRCCRKWITTETSVITQLFEGQLNYSIVCLKC-------EKC 197

Query: 351 VDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSD 410
                    N+  ++ +    S + C                +L  CL  F + + L  +
Sbjct: 198 T------YKNEVFTVLSLPIPSEYEC----------------SLQDCLQCFFQQDTLTWN 235

Query: 411 QKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMA 469
            +  C  C+ +QE+  +  I K P +  FH+KRF+     K  RK+   + +PL+ LD+ 
Sbjct: 236 NQIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQGTTK--RKLRTDIHYPLTNLDLT 293

Query: 470 PYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LS 527
           PY+           R +P              ++ L AVV H G LD GHY  + +   +
Sbjct: 294 PYICPIF-------RKYP--------------KYNLCAVVNHFGDLDGGHYTAFCKNSFT 332

Query: 528 NKWYKCDDAWITEVNENTVRAAQGYMMFY 556
             WY  DD  ++E+ + +V+ A  Y++FY
Sbjct: 333 QAWYSFDDTRVSEIPDTSVQNATAYLLFY 361


>gi|18086363|gb|AAL57643.1| AT3g14400/MLN21_18 [Arabidopsis thaliana]
          Length = 661

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 167/364 (45%), Gaps = 63/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL--CLACDLDTMFSA 257
           GL NLGNTC++NSVLQ L  TPPL N+ L+ +H+ +     +G R   C  C ++   + 
Sbjct: 25  GLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIAR 84

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKPRS 314
               D    +P K        A +     ++DAHEF   ++D  H    +++K ++    
Sbjct: 85  SLSVDLTTDAPNKISSCLKIFAEHFKLGREEDAHEFLRYVIDACHNTSLRLKKLRYNGNE 144

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
             NG+  +   +F G L+S V C++CG  S   D  +D SL++   Q SS+K S      
Sbjct: 145 PFNGNSVVKE-IFGGALQSQVKCLSCGAESNKADEIMDISLEIL--QSSSVKES------ 195

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                                  L +F + E L  + K+ C+ C+    + KQMSI + P
Sbjct: 196 -----------------------LQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAP 232

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            +    +KRF          K+D+ + F   L ++ ++S +                   
Sbjct: 233 NILVIQLKRFGGI----FGGKIDKAISFGEILVLSNFMSKAS------------------ 270

Query: 495 TLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGY 552
              +P  E++LF ++ H+G   ++GHY  Y++ S  +WY C+D++++      V + + Y
Sbjct: 271 --KDPQPEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAY 328

Query: 553 MMFY 556
           ++F+
Sbjct: 329 ILFF 332


>gi|395503246|ref|XP_003755981.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           isoform 2 [Sarcophilus harrisii]
          Length = 371

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 167/376 (44%), Gaps = 72/376 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     Q  +G     A     + 
Sbjct: 39  QGVTGLRNLGNTCYMNAILQCLCSITPLVEYFLSGKYITAL-QKDSGEA---ATAFAYLM 94

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + ++ GD    SP  F  +  +         QQDA EF I +L+ +HE ++K + K ++Q
Sbjct: 95  TDMWLGDSDCVSPEVFRAAIGKIYPAFLKRTQQDAQEFLIYVLNELHEALKKYRRK-KTQ 153

Query: 316 GNG------------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
            NG            +  I  R+F G L  D++C+ C                       
Sbjct: 154 ENGLSTKCYRKVASSESSIITRLFEGQLNYDIVCLKC----------------------- 190

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
               + T  N      +  + S   C +   +GC   F + + L  + +  C  C+ +Q+
Sbjct: 191 ---ENCTYKNEVFTVLSLPIPSECECSLQECLGC---FFQQDTLTWNNQIHCAFCESKQD 244

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILRSRFG 482
           +  + SI K P    FH+KRF+     ++ RK+   + +PL +LD++PY+          
Sbjct: 245 AAVRASIAKAPKTVIFHLKRFDCQG--RVKRKLRTDIHYPLNNLDLSPYI---------- 292

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITE 540
              +P        L     ++ L  VV H G LD GHY  + +  ++  WY  DD  + E
Sbjct: 293 ---YP--------LFRKHPKYSLCGVVNHFGDLDGGHYTAFCKNTVNQTWYSFDDTRVCE 341

Query: 541 VNENTVRAAQGYMMFY 556
           + ++ V+ A  Y++FY
Sbjct: 342 IPDSAVQTAAAYLLFY 357


>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
           [Rattus norvegicus]
          Length = 832

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 161/362 (44%), Gaps = 67/362 (18%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GN+C++N+VLQ L HTPPL +Y LS  H++  C  + G ++C A +     S + 
Sbjct: 380 GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCCYPE-GCKMC-AMEAHVTQSLLH 437

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P++ L       S    + Q+DAHEF +  L+ +HE   +   K     + D
Sbjct: 438 SHSGGVMKPSEIL------TSTFHKHRQEDAHEFLMFTLNAMHESCLRGC-KQSETSSKD 490

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCE 379
             + + +F G +RS + C  C  T  ++DP ++  LD+                      
Sbjct: 491 SSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDI---------------------- 528

Query: 380 ADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCF 439
                    C   ++   L+   + E L  D  ++C +C+ +  + K   ++    V   
Sbjct: 529 ---------CSAQSVKQALEDLVKLEELQGDNAYYCGRCREKMPASKTTKVQTASKVLLL 579

Query: 440 HIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEP 499
            + R    S      K++R + +P  LD+ PYLS             P  G         
Sbjct: 580 VLNR----SYDFGGDKLNRVVSYPEYLDLQPYLSQ------------PTAG--------- 614

Query: 500 SSEFELFAVVTHTG-KLDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYMMFYV 557
              + L+AV+ H G    +GHY  Y++ S+ KWYK DD+ +T  + ++V +   Y++FYV
Sbjct: 615 PLPYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYV 674

Query: 558 QK 559
           Q+
Sbjct: 675 QQ 676



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 9/158 (5%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N+GN+C++N+VLQ L HTPPL +Y LS  H++  C  + G ++C A +     S + 
Sbjct: 52  GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCCYPE-GCKMC-AMEAHVTQSLLH 109

Query: 260 CGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNGD 319
                   P++ L       S    + Q+D+HEF +  L+ +HE   +   K     + D
Sbjct: 110 SHSGGVMKPSEIL------TSTFHKHRQEDSHEFLMFTLNAMHESCLRGC-KQSETSSKD 162

Query: 320 CCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDL 357
             + + +F G +RS + C  C  T  ++DP ++  LD+
Sbjct: 163 SSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDI 200


>gi|301624586|ref|XP_002941584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like [Xenopus
           (Silurana) tropicalis]
          Length = 380

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 166/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 50  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKENLLTCLA----DLFHSIA 102

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 103 TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 162

Query: 317 -------------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
                          D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 163 IPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 219

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 220 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 251

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 252 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 294

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 295 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 350

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 351 AQAIEEFYGLTSDISKNSESGYILFY 376


>gi|328854662|gb|EGG03793.1| hypothetical protein MELLADRAFT_78495 [Melampsora larici-populina
           98AG31]
          Length = 717

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 154/363 (42%), Gaps = 64/363 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLS-DRHNRYYCQSKNGVRLCLACDLDTMFSAI 258
           G  N GNTCF+N+ LQAL +TP L    L    H R  C+  +    C  C +  + S  
Sbjct: 228 GFRNAGNTCFLNATLQALVYTPALAVGLLDRQEHTRDSCRLSHIKNFCALCSMRNLISMC 287

Query: 259 FCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG 316
              ++      P     S  + A  +    Q+DAHEF   +++ +       Q     Q 
Sbjct: 288 LEPNKTARVIEPTPITNSLTKIAPRMRGGRQEDAHEFLRLLIEAMQNGALGGQEAQAKQK 347

Query: 317 NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSC 376
           + +    HR+F+G  RS V C  C  TS TFD  +D SLD+             ++N+  
Sbjct: 348 DKEATFIHRMFAGKFRSRVTCQHCEGTSDTFDTFLDLSLDI------------GEANNVP 395

Query: 377 NCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV 436
           N            G +                   ++ C++C+  +++ K++S+ + P +
Sbjct: 396 NALRKLRKLDLLKGAN-------------------QYKCEKCKRLRDAKKELSVHEAPPI 436

Query: 437 SCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTL 496
              HIKRF         +K+++ +QF  SLD+   +                        
Sbjct: 437 LTLHIKRFNF-----RGKKINKRIQFSDSLDLNAAMDK---------------------- 469

Query: 497 NEPSSEFELFAVVTHTGKLD-AGHYVTYLRLSNK-WYKCDDAWITEVNENTV-RAAQGYM 553
           + P + + L+AVV H G  + +GHY +Y++ S++ WY+ DD  I  V+   V R  + Y+
Sbjct: 470 DAPHTRYNLYAVVCHQGPSNTSGHYYSYIKTSDRQWYRADDCSIDRVDRGQVFRNDEAYI 529

Query: 554 MFY 556
            FY
Sbjct: 530 FFY 532


>gi|226496747|ref|NP_001146737.1| uncharacterized protein LOC100280339 [Zea mays]
 gi|219888545|gb|ACL54647.1| unknown [Zea mays]
 gi|223974199|gb|ACN31287.1| unknown [Zea mays]
 gi|413918515|gb|AFW58447.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
           [Zea mays]
          Length = 368

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 169/422 (40%), Gaps = 103/422 (24%)

Query: 177 MVNNASPIDSMSSSNGDLPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNR 234
           MV  AS      +     P G R  GL N GNTC+ NSVLQAL+   P R   L      
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLL-----E 55

Query: 235 YYCQSK---NGVRLCLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQD 289
           YY  +K   +     L C L  +F  I    +     +P +F+    +      SY  QD
Sbjct: 56  YYANNKTPGDAEENLLTC-LADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQD 114

Query: 290 AHEFFISMLDGIHEKVEKD---------QHKPRSQGNG-------------DCCIAHRVF 327
           AHEF   +L+ + + +EK+            P    NG                + H+ F
Sbjct: 115 AHEFLNFLLNELVDILEKESSAAKDSPQSSSPEKAPNGPVQPLANGVKKEPPVTLVHKSF 174

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            GIL ++  C+ C   +   +  +D S+D+E N                           
Sbjct: 175 QGILTNETRCLRCETVTARDETFLDLSVDIEQN--------------------------- 207

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
               S++  CL  F   E L ++ KFFC +C   QE+ K+M I+K P +   H+KRF++ 
Sbjct: 208 ----SSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYI 263

Query: 448 SVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFELFA 507
                 +K+   + FP+ L +                        SN+ ++  +E+ LFA
Sbjct: 264 EQLGRYKKLSYRVVFPMELKL------------------------SNSSDDVDTEYSLFA 299

Query: 508 VVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGYMM 554
           VV H G   + GHYV+ ++  N W   DD  +  V E T++               GY++
Sbjct: 300 VVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGTSHEYSGNTDHGYIL 359

Query: 555 FY 556
           FY
Sbjct: 360 FY 361


>gi|73979654|ref|XP_854031.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
           lupus familiaris]
          Length = 535

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 184/426 (43%), Gaps = 82/426 (19%)

Query: 150 SSKPENLRKRRRIDYRPWSPDLRERSLMVNN--ASPIDSMSSSNGDLP--------RGLR 199
           S KP++   RR        P + E +   +   +SP D ++ ++  LP        + L 
Sbjct: 17  SPKPQSCWSRRGGAEVHGGPSVPETTSPASKTLSSPTDPLAPASAGLPPTKTPLSWKSLS 76

Query: 200 ----GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
               GL N+GNTC++N+ LQ L +T PL +Y LS +H    C+ +     C+ C L    
Sbjct: 77  QVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTT-CRRQTS---CMLCTLQAHL 132

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + + C       P + L       +    ++Q+DAHE+ + +LD + +    +      +
Sbjct: 133 TRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPE 186

Query: 316 GNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHS 375
              D  +  ++F G  RS + C+ C   S+T +P +D SLD+                  
Sbjct: 187 CPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDI------------------ 228

Query: 376 CNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPL 435
                D  + SQ          L++  +PE L  +  + C +C  +  + K +++   P 
Sbjct: 229 ----GDAHSVSQ---------ALEQLMKPELLEGENAYHCSKCLEKVPASKVLTLHTSPK 275

Query: 436 VSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNT 495
           V    ++RF   +  KM+++V    Q+P  LDM   LS          R  P        
Sbjct: 276 VLILVLRRFSDLTGNKMTKEV----QYPERLDMQHCLSE--------QRAGPL------- 316

Query: 496 LNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSN-KWYKCDDAWITEVNENTVRAAQGYM 553
                  + L+AV+ HTG+   +GHY  +++  N +WYK DDA ++  +         Y+
Sbjct: 317 ------VYVLYAVLVHTGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYV 370

Query: 554 MFYVQK 559
           +FY+QK
Sbjct: 371 LFYMQK 376


>gi|56541157|gb|AAH87530.1| LOC496173 protein, partial [Xenopus laevis]
          Length = 376

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C L  +F +I 
Sbjct: 46  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTC-LSDLFHSIA 98

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 99  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 158

Query: 317 -------------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
                          D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 159 IPNGNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 215

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 216 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 247

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 248 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 290

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 291 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 346

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 347 AQAIEEFYGLTSDISKNSESGYILFY 372


>gi|291403016|ref|XP_002717774.1| PREDICTED: Putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Oryctolagus cuniculus]
          Length = 373

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 166/376 (44%), Gaps = 72/376 (19%)

Query: 196 RGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMF 255
           +G+ GL NLGNTC+MN++LQ L    PL  YFLS ++     +  + V    A     + 
Sbjct: 41  QGVTGLRNLGNTCYMNAILQCLGSISPLVEYFLSGKYITALQKDCSDVATAFA----YLM 96

Query: 256 SAIFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQ 315
           + ++ GD    SP  F  +            QQDA EF I +L+ +HE ++K  H+ RS 
Sbjct: 97  TDMWLGDSDCVSPEIFRSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKK-YHRRRSY 155

Query: 316 GNGD---CC---------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             G    CC         I  ++F G L   ++C+ C       + C         N+  
Sbjct: 156 EKGSTQRCCRKAIANETSIITQLFEGQLNYGIICLKC-------ENCT------YRNEVF 202

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
           ++ +    S + C                +L  CL  F + + L  + +  C  C+ +QE
Sbjct: 203 TVLSLPIPSEYEC----------------SLQDCLQCFFQQDTLTWNNQIHCSFCETKQE 246

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLS-LDMAPYLSSSILRSRFG 482
           +  + SI K P +  FH+KRF+     K  RK+   + +PL+ LD+ PY+   + R    
Sbjct: 247 TAVRASISKAPKIIIFHLKRFDIQGTVK--RKLRTDIHYPLTNLDLTPYI-CPVFRKH-- 301

Query: 483 NRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLR--LSNKWYKCDDAWITE 540
                              ++ L AVV H G LD GHY  + +  ++  WY  DD  ++E
Sbjct: 302 ------------------PKYNLCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSE 343

Query: 541 VNENTVRAAQGYMMFY 556
           +   +V+ +  Y++FY
Sbjct: 344 IPNTSVQTSTAYLLFY 359


>gi|297834320|ref|XP_002885042.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
 gi|297330882|gb|EFH61301.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
          Length = 662

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 63/364 (17%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRL--CLACDLDTMFSA 257
           GL NLGNTC++NSVLQ L  TPPL N+ L+ +H+ +     +G R   C  C ++   + 
Sbjct: 25  GLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDSYVDGERKRDCPFCIVEKRIAR 84

Query: 258 IFCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHE---KVEKDQHKPRS 314
               D    +P K        A +     Q+DAHEF   ++D  H    +++K + K   
Sbjct: 85  SLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRIKGNE 144

Query: 315 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNH 374
             NG+  +   +F G L+S V C++CG  S   D  +D SL++       + +SS K + 
Sbjct: 145 PFNGN-TVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEI-------LHSSSVKES- 195

Query: 375 SCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLP 434
                                  + +F + E L  + K+ C+ C+    + KQMSI + P
Sbjct: 196 -----------------------MQKFFQSEILDGNNKYKCETCEKLVTARKQMSILQAP 232

Query: 435 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESN 494
            +    +KRF          K+D+ + F   L ++ ++S +                   
Sbjct: 233 NILVIQLKRFGGI----FGGKIDKAISFGEILVLSNFMSKAS------------------ 270

Query: 495 TLNEPSSEFELFAVVTHTG-KLDAGHYVTYLRLS-NKWYKCDDAWITEVNENTVRAAQGY 552
              +P  E++LF ++ H+G   ++GHY  Y++ S  +WY C+D++++      V + + Y
Sbjct: 271 --KDPQPEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAY 328

Query: 553 MMFY 556
           ++F+
Sbjct: 329 ILFF 332


>gi|156370210|ref|XP_001628364.1| predicted protein [Nematostella vectensis]
 gi|156215339|gb|EDO36301.1| predicted protein [Nematostella vectensis]
          Length = 409

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 163/381 (42%), Gaps = 91/381 (23%)

Query: 203 NLGNTCFMNSVLQALFHTPPLRNYFLS----DRHNRYYCQSKNGVRLCLACDLDTMFSAI 258
           NLGNTC+MNSVLQ LF+T PL  YF+S    D  N+      +G+ L         FS  
Sbjct: 84  NLGNTCYMNSVLQCLFNTAPLAAYFVSGAFRDDINKENPLGTSGMYLDFYFITSINFSFY 143

Query: 259 FCGDRMPYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGNG 318
                   SP  F        +      QQD  EF   M+D +HE V + +HKP  +   
Sbjct: 144 LTS-----SPEFF--------TTFEGVCQQDFQEFLALMMDKLHEDVCQIRHKPYLKAPD 190

Query: 319 DCC-------------------IAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEP 359
           D                     +   +F G+ +S V C+ C   S T++   + +L L  
Sbjct: 191 DNIDPAEAANITWDNHRKRNESLMLNLFDGMFKSTVRCLVCAKDSVTYETFSNLTLPLPG 250

Query: 360 NQGSSMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQ 419
           N           SNH                  +L  C+  FTR ER+  D  ++C +C+
Sbjct: 251 N-----------SNHC-----------------SLRDCIKLFTRAERMSGDDMWYCPRCK 282

Query: 420 VRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPL-SLDMAPYLSSSILR 478
             + + KQ+ I +LP +   H+KRF++  + +  +K+   + FP+  LDM+ Y++    R
Sbjct: 283 QHRVASKQLQIWRLPPILIVHLKRFQYDGMWR--QKLQTAVSFPVDGLDMSGYITGPTKR 340

Query: 479 SRFGNRFFPFDGDESNTLNEPSSEFELFAVVTHTGKLDAGHYVTYLRLSN--KWYKCDDA 536
                                   + L+ V  H G +  GHY  + + ++  +W+K DD 
Sbjct: 341 ----------------------PAYHLYGVSNHYGTMHGGHYTAFCKNAHNQRWFKFDDQ 378

Query: 537 WITEVNENTVRAAQGYMMFYV 557
            +TE++ N + ++  Y++FY 
Sbjct: 379 VVTEMSANDIVSSAAYLLFYT 399


>gi|211904161|ref|NP_001127798.2| ubiquitin specific peptidase [Nasonia vitripennis]
          Length = 353

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 160/381 (41%), Gaps = 82/381 (21%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L      Y  ++K      L C L  +F +I 
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKARNKRTKETLLTC-LADLFHSIA 78

Query: 260 CGDRM--PYSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKV--EKDQHKPRSQ 315
              +     +P KF+    +      +Y QQDAHEF   +++ I+E +  E++Q KP   
Sbjct: 79  TQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSKPAGG 138

Query: 316 GNG-------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTS 368
                     +    H +F GIL S+  C+ C   S+  +   D  +D++ N        
Sbjct: 139 KGAGDAGTPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQN-------- 190

Query: 369 STKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQM 428
                                  +++  CL  F+  E L SD KF C  C   QE+ K+M
Sbjct: 191 -----------------------TSITHCLKCFSNTETLCSDNKFKCDHCSSYQEAQKRM 227

Query: 429 SIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPF 488
            ++KLP++   H+KRF++        KV   + FPL L                 R F  
Sbjct: 228 MLKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLEL-----------------RLFNT 270

Query: 489 DGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVNENTVR 547
             D  N    P   ++L AVV H G   + GHY++ ++    W   DD  + +++ +T+ 
Sbjct: 271 SDDAVN----PDRLYDLVAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDSSTIE 326

Query: 548 ------------AAQGYMMFY 556
                       +  GY++FY
Sbjct: 327 DFYGLTSDIQKNSETGYILFY 347


>gi|251765111|sp|Q5M981.2|UB12B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-B; AltName:
           Full=Deubiquitinating enzyme 12-B; AltName:
           Full=Ubiquitin thioesterase 12-B; AltName:
           Full=Ubiquitin-specific-processing protease 12-B
          Length = 370

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C L  +F +I 
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTC-LSDLFHSIA 92

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 93  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152

Query: 317 -------------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
                          D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 153 IPNGNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 209

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 210 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 241

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 242 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 284

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 285 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 340

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 341 AQAIEEFYGLTSDISKNSESGYILFY 366


>gi|10434108|dbj|BAB14133.1| unnamed protein product [Homo sapiens]
          Length = 366

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 165/385 (42%), Gaps = 86/385 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q K    L L C  D   S   
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLA-----YKAQQKKKENL-LTCLADLFHSIAT 89

Query: 260 CGDRMPYSPAKFLYSWWRHASNL-ASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG-- 316
              ++   P K   S  R  ++L  +Y QQDAHEF   +L+ I + +++++ + +  G  
Sbjct: 90  QKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKL 149

Query: 317 -NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSS 364
            NG           +    H +F G L ++  C+ C   S+  +  +D S+D+E N    
Sbjct: 150 KNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQN---- 205

Query: 365 MKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQES 424
                                      +++  CL  F+  E L S+QK++C+ C  +QE+
Sbjct: 206 ---------------------------TSITHCLRDFSNTETLCSEQKYYCETCCSKQEA 238

Query: 425 LKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNR 484
            K+M ++KLP+V   H+KRF++    +   K+   + FPL L                 R
Sbjct: 239 QKRMRVKKLPMVLALHLKRFKYMEQLRRYTKLSYRVVFPLEL-----------------R 281

Query: 485 FFPFDGDESNTLNEPSSEFELFAVVTHTGKL-DAGHYVTYLRLSNKWYKCDDAWITEVNE 543
            F    D  N        ++L AVV H G   + GHY+T ++    W   DD  + +++ 
Sbjct: 282 LFNTSSDAVNL----DRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDA 337

Query: 544 NTVR------------AAQGYMMFY 556
             +             +  GY++FY
Sbjct: 338 QAIEEFYGLTSDISKNSESGYILFY 362


>gi|335296741|ref|XP_003130951.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sus scrofa]
          Length = 366

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 167/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKESLLTCLA----DLFHSIA 88

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 89  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 148

Query: 317 --NG-----------DCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
             NG           D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 149 LPNGNIDTENNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 205

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 206 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 237

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 238 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 280

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G     GHY+  ++  + W   DD  + +++
Sbjct: 281 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPHRGHYIAIVKSHDFWLLFDDDIVEKID 336

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 337 AQAIEEFYGLTSDISKNSESGYILFY 362


>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 373

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 174/424 (41%), Gaps = 102/424 (24%)

Query: 177 MVNNASPIDSMSSSNGDLPRGLR--GLNNLGNTCFMNSVLQALFHTPPLRNYFLSD-RHN 233
           MV  AS      +     P G R  GL N GNTC+ NSVLQAL+   P R+  L     +
Sbjct: 1   MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQS 60

Query: 234 RYYCQSKNGVRLCLACDLDTMFSAIFCGDRMP--YSPAKFLYSWWRHASNLASYEQQDAH 291
           +   +++  +  CL+     +FS I    +     +P +F+    +      SY  QDAH
Sbjct: 61  KPVAEAEENLLTCLS----ELFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAH 116

Query: 292 EFFISMLDGIHEKVEKDQHKPRSQ-----------GNGD-------------CCIAHRVF 327
           EF   +L+ + + +E++    +S            GNG                  H++F
Sbjct: 117 EFLNFLLNELVDILEREAKAAKSNSGCETSPGKVVGNGSVSGLANGTHKEAVVTWVHKIF 176

Query: 328 SGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGSSMKTSSTKSNHSCNCEADGMNSSQ 387
            GIL ++  C+ C   +   +  +D SLD+E N                           
Sbjct: 177 QGILTNETRCLRCETITARDETFLDLSLDIEQN--------------------------- 209

Query: 388 NCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHS 447
               S++  CL  F+  E L ++ KFFC +C   QE+ K+M I+  P +   H+KRF++ 
Sbjct: 210 ----SSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSAPRILALHLKRFKYI 265

Query: 448 SVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGNRFFPFDGDESNTLNEPSSEFE--L 505
                 +K+   + FPL L +                        + T + P SE E  L
Sbjct: 266 EQLGRYKKLSYRVVFPLELKLC-----------------------NTTDDAPGSEAEYSL 302

Query: 506 FAVVTHTGKL-DAGHYVTYLRLSNKWYKCDDAWITEVNENTVR------------AAQGY 552
           FAVV H G   + GHYV+ ++  N W   DD  +  ++E+ V+               GY
Sbjct: 303 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDHGY 362

Query: 553 MMFY 556
           ++FY
Sbjct: 363 ILFY 366


>gi|301500675|ref|NP_872294.2| ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens]
 gi|296203592|ref|XP_002748984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Callithrix
           jacchus]
 gi|332841062|ref|XP_001135418.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan
           troglodytes]
 gi|402901626|ref|XP_003913746.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Papio anubis]
 gi|118572732|sp|O75317.2|UBP12_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
           enzyme 1; AltName: Full=Ubiquitin-specific-processing
           protease 12
 gi|119628797|gb|EAX08392.1| ubiquitin specific peptidase 12, isoform CRA_a [Homo sapiens]
 gi|158260393|dbj|BAF82374.1| unnamed protein product [Homo sapiens]
 gi|380810518|gb|AFE77134.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
 gi|383416533|gb|AFH31480.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
 gi|384945814|gb|AFI36512.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
 gi|410219534|gb|JAA06986.1| ubiquitin specific peptidase 12 [Pan troglodytes]
 gi|410266420|gb|JAA21176.1| ubiquitin specific peptidase 12 [Pan troglodytes]
 gi|410292612|gb|JAA24906.1| ubiquitin specific peptidase 12 [Pan troglodytes]
 gi|410355297|gb|JAA44252.1| ubiquitin specific peptidase 12 [Pan troglodytes]
          Length = 370

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 166/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKESLLTCLA----DLFHSIA 92

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 93  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152

Query: 317 -------------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
                          D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 153 LPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 209

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 210 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 241

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 242 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 284

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 285 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 340

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 341 AQAIEEFYGLTSDISKNSESGYILFY 366


>gi|148234164|ref|NP_001089397.1| ubiquitin carboxyl-terminal hydrolase 12-A [Xenopus laevis]
 gi|82177909|sp|Q52KZ6.1|UB12A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-A; AltName:
           Full=Deubiquitinating enzyme 12-A; AltName:
           Full=Ubiquitin thioesterase 12-A; AltName:
           Full=Ubiquitin-specific-processing protease 12-A
 gi|62825915|gb|AAH94130.1| MGC115150 protein [Xenopus laevis]
          Length = 370

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+     Y  Q +    L L C L  +F +I 
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLA-----YKSQPRKKENL-LTC-LSDLFHSIA 92

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQGN 317
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 93  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152

Query: 318 --------------GDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
                          D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 153 IPNGNIDNENNNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 209

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 210 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 241

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 242 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 284

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 285 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 340

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 341 AQAIEEFYGLTSDISKNSESGYILFY 366


>gi|397495119|ref|XP_003818408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan paniscus]
          Length = 361

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 166/386 (43%), Gaps = 88/386 (22%)

Query: 200 GLNNLGNTCFMNSVLQALFHTPPLRNYFLSDRHNRYYCQSKNGVRLCLACDLDTMFSAIF 259
           GL N GNTC+ NSVLQAL+   P R   L+ +      + K  +  CLA     +F +I 
Sbjct: 31  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP---RKKESLLTCLA----DLFHSIA 83

Query: 260 CGDRMP--YSPAKFLYSWWRHASNLASYEQQDAHEFFISMLDGIHEKVEKDQHKPRSQG- 316
              +      P KF+    +      +Y QQDAHEF   +L+ I + +++++ + +  G 
Sbjct: 84  TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 143

Query: 317 -------------NGDCCIAHRVFSGILRSDVMCMACGFTSTTFDPCVDFSLDLEPNQGS 363
                          D    H +F G L ++  C+ C   S+  +  +D S+D+E N   
Sbjct: 144 LPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN--- 200

Query: 364 SMKTSSTKSNHSCNCEADGMNSSQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQE 423
                                       +++  CL  F+  E L S+ K++C++C+ +QE
Sbjct: 201 ----------------------------TSITHCLRGFSNTETLCSEYKYYCEECRSKQE 232

Query: 424 SLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPLSLDMAPYLSSSILRSRFGN 483
           + K+M ++KLP++   H+KRF++        K+   + FPL L                 
Sbjct: 233 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL----------------- 275

Query: 484 RFFPFDGDESNTLNEPSSEFELFAVVTHTGK-LDAGHYVTYLRLSNKWYKCDDAWITEVN 542
           R F   GD +N    P   ++L AVV H G   + GHY+  ++  + W   DD  + +++
Sbjct: 276 RLFNTSGDATN----PDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID 331

Query: 543 ENTVR------------AAQGYMMFY 556
              +             +  GY++FY
Sbjct: 332 AQAIEEFYGLTSDISKNSESGYILFY 357


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.134    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,908,034,043
Number of Sequences: 23463169
Number of extensions: 361629834
Number of successful extensions: 734864
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5861
Number of HSP's successfully gapped in prelim test: 2755
Number of HSP's that attempted gapping in prelim test: 700169
Number of HSP's gapped (non-prelim): 19852
length of query: 572
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 424
effective length of database: 8,886,646,355
effective search space: 3767938054520
effective search space used: 3767938054520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)