Query 008269
Match_columns 571
No_of_seqs 181 out of 434
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 22:12:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008269.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008269hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2mrba_ g.46.1.1 (A:) Metallot 59.9 2.8 0.00021 28.0 2.6 22 105-126 4-28 (31)
2 d1ml9a_ b.85.7.1 (A:) Dim-5 {F 57.1 3.3 0.00024 38.0 3.5 22 176-197 39-61 (284)
3 d1t2ya_ g.46.1.1 (A:) Metallot 48.5 5.5 0.0004 25.6 2.4 21 105-125 2-24 (26)
4 d1m0ja_ g.46.1.1 (A:) Metallot 19.6 19 0.0014 23.4 1.2 8 203-210 21-28 (28)
5 d1mvha_ b.85.7.1 (A:) SET doma 19.5 27 0.002 31.8 2.8 15 199-213 114-129 (269)
6 d1te7a_ b.122.1.7 (A:) Hypothe 16.4 24 0.0017 29.2 1.4 26 451-476 63-88 (103)
7 d2bbga_ g.6.1.1 (A:) Amb V all 15.1 2.1 0.00015 30.0 -4.6 17 188-204 23-39 (40)
8 d1m0ga_ g.46.1.1 (A:) Metallot 7.6 87 0.0063 20.4 1.6 27 178-204 2-28 (30)
9 d1qjla_ g.46.1.1 (A:) Metallot 6.2 1.5E+02 0.011 18.9 2.3 12 196-207 11-22 (28)
10 d2nrka1 d.218.1.14 (A:4-170) H 5.9 84 0.0061 26.5 1.1 8 468-475 113-120 (167)
No 1
>d2mrba_ g.46.1.1 (A:) Metallothionein {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=59.88 E-value=2.8 Score=28.04 Aligned_cols=22 Identities=41% Similarity=1.050 Sum_probs=18.3
Q ss_pred ccccccCCCCCC---CCCCCCCCCC
Q 008269 105 YCECFAAGIYCD---GCNCVNCHNN 126 (571)
Q Consensus 105 YCeCFAaG~yC~---~CnC~~C~N~ 126 (571)
-|.|-|+|..|. .|.|..|+-+
T Consensus 4 ncscaaagdsc~ca~sctck~ckct 28 (31)
T d2mrba_ 4 NCSCAAAGDSCTCANSCTCKACKCT 28 (31)
T ss_dssp SCCCCCSSSCCCCSSCCCCSSCCCT
T ss_pred CccccccCCcccccCceeecceeee
Confidence 699999999995 6888888643
No 2
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}
Probab=57.15 E-value=3.3 Score=38.04 Aligned_cols=22 Identities=27% Similarity=0.957 Sum_probs=16.5
Q ss_pred CCCcccCCc-ccccchhhhhccC
Q 008269 176 NKGCHCKKS-GCLKKYCECFQAN 197 (571)
Q Consensus 176 ~kGCnCKKS-~CLKkYCECF~ag 197 (571)
..||.|.-. .|....|.|.+..
T Consensus 39 ~~gC~C~~~~~c~~~~C~C~~~~ 61 (284)
T d1ml9a_ 39 RVGCSCASDEECMYSTCQCLDEM 61 (284)
T ss_dssp CCCCCCSSTTGGGSTTSGGGTTS
T ss_pred CCCCCCcCCCCcCCCCCcChhhc
Confidence 569999865 5788889996543
No 3
>d1t2ya_ g.46.1.1 (A:) Metallothionein {Neurospora crassa [TaxId: 5141]}
Probab=48.48 E-value=5.5 Score=25.64 Aligned_cols=21 Identities=43% Similarity=1.172 Sum_probs=14.2
Q ss_pred ccccc-cCCCCCC-CCCCCCCCC
Q 008269 105 YCECF-AAGIYCD-GCNCVNCHN 125 (571)
Q Consensus 105 YCeCF-AaG~yC~-~CnC~~C~N 125 (571)
-|-|- |+.--|. +|.|.||..
T Consensus 2 dcgcsgasscncgsgcscsncgs 24 (26)
T d1t2ya_ 2 DCGCSGASSCNCGSGCSCSNCGS 24 (26)
T ss_dssp CCSCSSTTTCCCSSSCCSSTTSC
T ss_pred CcccCccccccCCCCcccccccc
Confidence 46665 3444565 899999974
No 4
>d1m0ja_ g.46.1.1 (A:) Metallothionein {Black rockcod (Notothenia coriiceps) [TaxId: 8208]}
Probab=19.57 E-value=19 Score=23.41 Aligned_cols=8 Identities=63% Similarity=1.651 Sum_probs=3.9
Q ss_pred CCcccCCC
Q 008269 203 NCRCLDCK 210 (571)
Q Consensus 203 ~CkC~~Ck 210 (571)
+|.|..|+
T Consensus 21 ncscksck 28 (28)
T d1m0ja_ 21 NCSCKSCK 28 (28)
T ss_dssp SCCCTTTC
T ss_pred CcccccCC
Confidence 45555443
No 5
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=19.54 E-value=27 Score=31.78 Aligned_cols=15 Identities=33% Similarity=0.990 Sum_probs=12.5
Q ss_pred CCCCCCcc-cCCCCCC
Q 008269 199 LCSENCRC-LDCKNFE 213 (571)
Q Consensus 199 ~Cs~~CkC-~~CkN~e 213 (571)
-|+..|+| ..|.|..
T Consensus 114 EC~~~C~C~~~C~Nr~ 129 (269)
T d1mvha_ 114 ECNSFCSCSMECPNRV 129 (269)
T ss_dssp CCCTTSCSCTTCTTCT
T ss_pred ECCCCCCCCCCCCCee
Confidence 59999999 5799874
No 6
>d1te7a_ b.122.1.7 (A:) Hypothetical protein YqfB {Escherichia coli [TaxId: 562]}
Probab=16.45 E-value=24 Score=29.22 Aligned_cols=26 Identities=27% Similarity=0.323 Sum_probs=22.6
Q ss_pred ccchhHHHHHHHHHHHHhHHHHHHHH
Q 008269 451 AYASTRIYAEQERLILTRFRDFLNRL 476 (571)
Q Consensus 451 ~q~~sel~aeQEr~VLT~FRD~L~~l 476 (571)
=.+++|.+|+||..-|-++++.++.+
T Consensus 63 fd~Lne~HA~QEnM~L~eLK~vI~eI 88 (103)
T d1te7a_ 63 LDTLTEKHAEQENMTLTELKKVIADI 88 (103)
T ss_dssp STTTSTHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHhhHHHHhhcCCCHHHHHHHHHHH
Confidence 46789999999999999998888765
No 7
>d2bbga_ g.6.1.1 (A:) Amb V allergen {Giant ragweed (Ambrosia trifida), pollen [TaxId: 4214]}
Probab=15.13 E-value=2.1 Score=29.99 Aligned_cols=17 Identities=41% Similarity=1.366 Sum_probs=12.5
Q ss_pred cchhhhhccCCCCCCCC
Q 008269 188 KKYCECFQANILCSENC 204 (571)
Q Consensus 188 KkYCECF~agv~Cs~~C 204 (571)
-+||.||.....|+.+|
T Consensus 23 gkycvcydskaicnknc 39 (40)
T d2bbga_ 23 GKYCVCYDSKAICNKNC 39 (40)
T ss_dssp SSSCEEESSHHHHHHHH
T ss_pred cCEEEEeccHHhhccCC
Confidence 37888888777776555
No 8
>d1m0ga_ g.46.1.1 (A:) Metallothionein {Black rockcod (Notothenia coriiceps) [TaxId: 8208]}
Probab=7.56 E-value=87 Score=20.39 Aligned_cols=27 Identities=33% Similarity=0.779 Sum_probs=18.0
Q ss_pred CcccCCcccccchhhhhccCCCCCCCC
Q 008269 178 GCHCKKSGCLKKYCECFQANILCSENC 204 (571)
Q Consensus 178 GCnCKKS~CLKkYCECF~agv~Cs~~C 204 (571)
-|.|..|+|.|--=-|.-.|+.|...|
T Consensus 2 cc~ccpsgc~kcasgcvckgktcdtsc 28 (30)
T d1m0ga_ 2 CCPCCPSGCTKCASGCVCKGKTCDTSC 28 (30)
T ss_dssp CCTTSCSCCHHHHTSCGGGTSSSSTTT
T ss_pred CCCccccccchhccCceecCCcccccc
Confidence 377888888885555555666665544
No 9
>d1qjla_ g.46.1.1 (A:) Metallothionein {Purple sea urchin (Strongylocentrotus purpuratus) [TaxId: 7668]}
Probab=6.24 E-value=1.5e+02 Score=18.89 Aligned_cols=12 Identities=25% Similarity=0.858 Sum_probs=6.7
Q ss_pred cCCCCCCCCccc
Q 008269 196 ANILCSENCRCL 207 (571)
Q Consensus 196 agv~Cs~~CkC~ 207 (571)
.|-.|++.|.|.
T Consensus 11 ngckcgsgcsct 22 (28)
T d1qjla_ 11 NGCKCGSGCSCT 22 (28)
T ss_dssp TTCCTTSCCCCB
T ss_pred cCcccCCCcccc
Confidence 345566666664
No 10
>d2nrka1 d.218.1.14 (A:4-170) Hypothetical protein GrpB {Enterococcus faecalis [TaxId: 1351]}
Probab=5.89 E-value=84 Score=26.51 Aligned_cols=8 Identities=38% Similarity=0.962 Sum_probs=7.0
Q ss_pred hHHHHHHH
Q 008269 468 RFRDFLNR 475 (571)
Q Consensus 468 ~FRD~L~~ 475 (571)
.||||||.
T Consensus 113 ~FRD~Lr~ 120 (167)
T d2nrka1 113 AFRNYLRE 120 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 59999985
Done!