BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008274
(571 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From
Stenotrophomonas Maltophilia
Length = 741
Score = 311 bits (797), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 286/549 (52%), Gaps = 39/549 (7%)
Query: 11 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIP---RFRIMHQGKSSVGSEAQED 67
+G+AE++A EEMDR TGYWW+ D IA+ ++D S +P R+ + + +
Sbjct: 197 NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVI------E 250
Query: 68 HAYPFAGASNVKVRLGVVSAA-GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQV 126
YP AG +NV+V+LGV+S A W+DL G +Q+ YLARVNW L+ Q
Sbjct: 251 QRYPAAGDANVQVKLGVISPAEQAQTQWIDL---GKEQDI---YLARVNWRDPQHLSFQR 304
Query: 127 LNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186
+R Q KL +++ + + Q++V+ E +WV LH+ LD G +W+SE+TG
Sbjct: 305 QSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD------DGSILWSSERTG 358
Query: 187 FRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246
F+HLY D G +T G+W V++++ V+E +G YF ++ ES +Y L
Sbjct: 359 FQHLYRIDSKGKAAA-LTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG- 416
Query: 247 NHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPL 306
P +L+ G H A N +VD + +PP+I L +G + L E L
Sbjct: 417 -----QPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFR-ANGEKIATLVENDL 470
Query: 307 TVPRIK----RLQLEPPDIVQIQANDG-TVLYGALYKPDESRYGPPP-YKTLISVYGGPC 360
P+ R P + + A DG T L ++ KP + + P Y + VYGGP
Sbjct: 471 ADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKP--AGFDPAKRYPVAVYVYGGPA 528
Query: 361 VQLVCDSWINTVD-MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT 419
Q V DSW D + QYL +G +V+ LDNRGT RRG F ++ G ++ DQL
Sbjct: 529 SQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLR 588
Query: 420 GAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE 479
G WL +Q I + LA+ D + C V+GAPVT W YD+ YTE
Sbjct: 589 GVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTE 648
Query: 480 KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539
+YM LP+ + GY + V+ H+ ++ LLL+HGM D+NV F ++ L++AL +P+E
Sbjct: 649 RYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFE 708
Query: 540 ILIFPDERH 548
++ +P +H
Sbjct: 709 LMTYPGAKH 717
>pdb|2D5L|A Chain A, Crystal Structure Of Prolyl Tripeptidyl Aminopeptidase
From Porphyromonas Gingivalis
pdb|2EEP|A Chain A, Prolyl Tripeptidyl Aminopeptidase Complexed With An
Inhibitor
Length = 706
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 253/563 (44%), Gaps = 41/563 (7%)
Query: 14 AEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 73
+ + Q E + G +WS +AF ++D S + I+ S+ YP A
Sbjct: 172 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL---YYPMA 228
Query: 74 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQT 132
G + V +G+ A G + LQ G E++L ++W NIL +NR+Q
Sbjct: 229 GTPSHHVTVGIYHLATGKTVY--LQTG----EPKEKFLTNLSWSPDENILYVAEVNRAQN 282
Query: 133 KLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 191
+ KV +D +TG+ + + VE +V T L + FIW S + G+ HLY
Sbjct: 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ----FIWQSRRDGWNHLY 338
Query: 192 LHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251
L+D G + +T+G+W V G + ++YF T PLE H YC +
Sbjct: 339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK--- 395
Query: 252 APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT---V 308
LT G H L + +D S P ++ + ++ GS L + P T +
Sbjct: 396 ---DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAM 452
Query: 309 PRIKRLQLEPPDIVQIQANDG-TVLYGALYKP---DESRYGPPPYKTLISVYGGPCVQLV 364
P I+ I A DG T LY L P D ++ Y ++ VYGGP QLV
Sbjct: 453 PEIR--------TGTIMAADGQTPLYYKLTMPLHFDPAK----KYPVIVYVYGGPHAQLV 500
Query: 365 CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424
+W ++V Y+ KG V+ +D+RG+A RG FE I G+ + DQ+ G ++L
Sbjct: 501 TKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFL 560
Query: 425 IKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484
Q I + DVF+ V+G PV W+ Y+ Y E+Y
Sbjct: 561 KSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYEIMYGERYFDA 620
Query: 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544
P E+P GY+ ++++ +KG+L+L+HG ID V ++H+ ++A V AR + ++P
Sbjct: 621 PQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYP 680
Query: 545 DERHMPRRHRDRIYMEERIWEFI 567
H DR+++ E I +
Sbjct: 681 SHEHN-VMGPDRVHLYETITRYF 702
>pdb|2DCM|A Chain A, The Crystal Structure Of S603a Mutated Prolyl Tripeptidyl
Aminopeptidase Complexed With Substrate
Length = 706
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 253/563 (44%), Gaps = 41/563 (7%)
Query: 14 AEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 73
+ + Q E + G +WS +AF ++D S + I+ S+ YP A
Sbjct: 172 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL---YYPMA 228
Query: 74 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQT 132
G + V +G+ A G + LQ G E++L ++W NIL +NR+Q
Sbjct: 229 GTPSHHVTVGIYHLATGKTVY--LQTG----EPKEKFLTNLSWSPDENILYVAEVNRAQN 282
Query: 133 KLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 191
+ KV +D +TG+ + + VE +V T L + FIW S + G+ HLY
Sbjct: 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ----FIWQSRRDGWNHLY 338
Query: 192 LHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251
L+D G + +T+G+W V G + ++YF T PLE H YC +
Sbjct: 339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK--- 395
Query: 252 APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT---V 308
LT G H L + +D S P ++ + ++ GS L + P T +
Sbjct: 396 ---DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAM 452
Query: 309 PRIKRLQLEPPDIVQIQANDG-TVLYGALYKP---DESRYGPPPYKTLISVYGGPCVQLV 364
P I+ I A DG T LY L P D ++ Y ++ VYGGP QLV
Sbjct: 453 PEIR--------TGTIMAADGQTPLYYKLTMPLHFDPAK----KYPVIVYVYGGPHAQLV 500
Query: 365 CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424
+W ++V Y+ KG V+ +D+RG+A RG FE I G+ + DQ+ G ++L
Sbjct: 501 TKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFL 560
Query: 425 IKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484
Q I + DVF+ V+G PV W+ Y+ Y E+Y
Sbjct: 561 KSQSWVDADRIGVHGWAYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYEIMYGERYFDA 620
Query: 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544
P E+P GY+ ++++ +KG+L+L+HG ID V ++H+ ++A V AR + ++P
Sbjct: 621 PQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYP 680
Query: 545 DERHMPRRHRDRIYMEERIWEFI 567
H DR+++ E I +
Sbjct: 681 SHEHN-VMGPDRVHLYETITRYF 702
>pdb|2Z3W|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a
pdb|2Z3Z|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a Complexd
With An Inhibitor
Length = 706
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 252/563 (44%), Gaps = 41/563 (7%)
Query: 14 AEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 73
+ + Q E + G +WS +AF ++D S + I+ S+ YP A
Sbjct: 172 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL---YYPMA 228
Query: 74 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQT 132
G + V +G+ A G + LQ G E++L ++W NIL +NR+Q
Sbjct: 229 GTPSHHVTVGIYHLATGKTVY--LQTG----EPKEKFLTNLSWSPDENILYVAEVNRAQN 282
Query: 133 KLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 191
+ KV +D +TG+ + + VE +V T L + FIW S + G+ HLY
Sbjct: 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ----FIWQSRRDGWNHLY 338
Query: 192 LHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251
L+D G + +T+G+W V G + ++YF T PLE H YC +
Sbjct: 339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK--- 395
Query: 252 APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT---V 308
LT G H L + +D S P ++ + ++ GS L + P T +
Sbjct: 396 ---DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAM 452
Query: 309 PRIKRLQLEPPDIVQIQANDG-TVLYGALYKP---DESRYGPPPYKTLISVYGGPCVQLV 364
P I+ I A DG T LY L P D ++ Y ++ VYGGP QLV
Sbjct: 453 PEIR--------TGTIMAADGQTPLYYKLTMPLHFDPAK----KYPVIVYVYGGPHAQLV 500
Query: 365 CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424
+W ++V Y+ KG V+ +D+RG+A RG FE I G+ + DQ+ G ++L
Sbjct: 501 TKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFL 560
Query: 425 IKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484
Q I + DVF+ V+G PV W+ Y Y E+Y
Sbjct: 561 KSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDA 620
Query: 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544
P E+P GY+ ++++ +KG+L+L+HG ID V ++H+ ++A V AR + ++P
Sbjct: 621 PQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYP 680
Query: 545 DERHMPRRHRDRIYMEERIWEFI 567
H DR+++ E I +
Sbjct: 681 SHEHN-VMGPDRVHLYETITRYF 702
>pdb|1Z68|A Chain A, Crystal Structure Of Human Fibroblast Activation Protein
Alpha
pdb|1Z68|B Chain B, Crystal Structure Of Human Fibroblast Activation Protein
Alpha
Length = 719
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/575 (25%), Positives = 254/575 (44%), Gaps = 71/575 (12%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EEM K WWS + KF+A+ + + ++IP + G +
Sbjct: 156 NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI--NIP 213
Query: 70 YPFAGASNVKVRLGVVS----AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQ 125
YP AGA N VR+ ++ A GP + + +Y Y + + W+ + Q
Sbjct: 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQE-VPVPAMIASSDY---YFSWLTWVTDERVCLQ 269
Query: 126 VLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTP---LDKGVTKYSGGFIWA- 181
L R Q + D + E+ +W DC +++ T ++GGF +
Sbjct: 270 WLKRVQNVSVLSICDFR---------EDWQTW----DCPKTQEHIEESRTGWAGGFFVST 316
Query: 182 --------------SEKTGFRHL-YLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFT 226
S+K G++H+ Y+ D + IT G W I V + S
Sbjct: 317 PVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAI-QITSGKWEAINIFRVTQDSLFYSSN 375
Query: 227 GTLDGPLESHLYCAKL--YPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSP 284
+ P ++Y + YP + ++ + + ++ ++ +
Sbjct: 376 EFEEYPGRRNIYRISIGSYPPSKKCVTCHLR-----KERCQYYTASFSDYAKYYALVCYG 430
Query: 285 PRILLCSLQDGSL---VLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDE 341
P I + +L DG + L E +K +QL +I +++ ++ T+ Y + P
Sbjct: 431 PGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDEITLWYKMILPPQF 490
Query: 342 SRYGPPPYKTLISVYGGPCVQLV----CDSWINTVDMRAQYLRSK-GILVWKLDNRGTAR 396
R Y LI VYGGPC Q V +WI+ YL SK G+++ +D RGTA
Sbjct: 491 DR--SKKYPLLIQVYGGPCSQSVRSVFAVNWIS-------YLASKEGMVIALVDGRGTAF 541
Query: 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPD 456
+G K ++ G + EDQ+T I+ G I ++ LA
Sbjct: 542 QGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTG 601
Query: 457 VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDP--VGYEYSSVMHHVHKMKG-KLLLVHG 513
+F+C ++ APV+SW+ Y + YTE++MGLP++D Y+ S+VM + LL+HG
Sbjct: 602 LFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHG 661
Query: 514 MIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
D+NVHF+++A++ ALV A+ ++ + + D+ H
Sbjct: 662 TADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNH 696
>pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
pdb|1PFQ|B Chain B, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
Length = 731
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 161 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 220
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 221 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 280
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 281 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 337
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 338 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 394
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 395 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 453
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 454 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 509
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 510 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 563
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 564 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 623
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 624 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 683
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 684 ISKALVDVGVDFQAMWYTDEDH 705
>pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
Length = 739
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 169 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 228
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 229 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 288
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 289 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 345
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 346 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 402
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 403 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 461
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 462 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 517
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 518 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 571
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 572 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 631
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 632 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 691
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 692 ISKALVDVGVDFQAMWYTDEDH 713
>pdb|2RIP|A Chain A, Structure Of Dppiv In Complex With An Inhibitor
Length = 729
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 159 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 218
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 219 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 278
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 279 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 335
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 336 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 392
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 393 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 451
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 452 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 507
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 508 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 561
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 562 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 621
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 622 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 681
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 682 ISKALVDVGVDFQAMWYTDEDH 703
>pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QT9|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
Length = 766
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 196 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 255
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 256 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 315
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 316 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 372
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 373 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 429
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 430 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 488
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 489 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 544
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 545 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 598
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 599 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 658
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 659 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 718
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 719 ISKALVDVGVDFQAMWYTDEDH 740
>pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3G0B|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0C|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0D|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0G|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3O95|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O9V|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3OPM|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|4G1F|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
Length = 740
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 170 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 229
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 230 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 289
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 290 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 346
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 347 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 403
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 404 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 462
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 463 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 518
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 519 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 572
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 573 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 632
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 633 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 692
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 693 ISKALVDVGVDFQAMWYTDEDH 714
>pdb|3NOX|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-(6-
(Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1,
2-A]pyrimidin- 2-Yl)(Morpholino)methanone
pdb|3NOX|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-(6-
(Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1,
2-A]pyrimidin- 2-Yl)(Morpholino)methanone
pdb|3SWW|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SWW|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SX4|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SX4|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3Q0T|A Chain A, Crystal Structure Of Human Dpp-iv In Complex Withsa-(+)-
Methyl2-(3-
(aminomethyl)-4-(2,4-dichlorophenyl)-2-methyl-
7-oxo-5h-pyrrolo[3,4- B]pyridin-6(7h)-yl)acetate
pdb|3Q0T|B Chain B, Crystal Structure Of Human Dpp-iv In Complex Withsa-(+)-
Methyl2-(3-
(aminomethyl)-4-(2,4-dichlorophenyl)-2-methyl-
7-oxo-5h-pyrrolo[3,4- B]pyridin-6(7h)-yl)acetate
Length = 753
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 160 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 219
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 220 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 279
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 280 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 336
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 337 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 393
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 394 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 452
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 453 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 508
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 509 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 562
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 563 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 622
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 623 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 682
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 683 ISKALVDVGVDFQAMWYTDEDH 704
>pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|2QJR|B Chain B, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|3F8S|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
pdb|3F8S|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
Length = 748
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 166 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 225
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 226 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 285
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 286 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 342
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 343 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 399
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 400 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 458
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 459 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 514
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 515 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 568
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 569 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 628
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 629 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 688
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 689 ISKALVDVGVDFQAMWYTDEDH 710
>pdb|1X70|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino
Acid Inhibitor
pdb|1X70|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino
Acid Inhibitor
pdb|2FJP|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|2FJP|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|2HHA|A Chain A, The Structure Of Dpp4 In Complex With An Oxadiazole
Inhibitor
pdb|2HHA|B Chain B, The Structure Of Dpp4 In Complex With An Oxadiazole
Inhibitor
pdb|2IIT|A Chain A, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-one Inhibitor
pdb|2IIT|B Chain B, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-one Inhibitor
pdb|2IIV|A Chain A, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-One Inhibitor
pdb|2IIV|B Chain B, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-One Inhibitor
pdb|2OPH|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With An Alpha
Amino Acid Inhibitor
pdb|2OPH|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With An Alpha
Amino Acid Inhibitor
pdb|2P8S|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
CYCLOHEXALAMINE Inhibitor
pdb|2P8S|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
CYCLOHEXALAMINE Inhibitor
pdb|2QOE|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A
Triazolopiperazine- Based Beta Amino Acid Inhibitor
pdb|2QOE|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With A
Triazolopiperazine- Based Beta Amino Acid Inhibitor
pdb|3C43|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLOUROOLEFIN Inhibitor
pdb|3C43|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLOUROOLEFIN Inhibitor
pdb|3C45|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLUOROOLEFIN Inhibitor
pdb|3C45|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLUOROOLEFIN Inhibitor
pdb|3D4L|A Chain A, Human Dipeptidyl Peptidase Iv/cd26 In Complex With A Novel
Inhibitor
pdb|3D4L|B Chain B, Human Dipeptidyl Peptidase Iv/cd26 In Complex With A Novel
Inhibitor
pdb|2QKY|A Chain A, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|B Chain B, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|C Chain C, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|D Chain D, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|3HAB|A Chain A, The Structure Of Dpp4 In Complex With Piperidine Fused
Benzimidazole 25
pdb|3HAB|B Chain B, The Structure Of Dpp4 In Complex With Piperidine Fused
Benzimidazole 25
pdb|3HAC|A Chain A, The Structure Of Dpp-4 In Complex With Piperidine Fused
Imidazopyridine 34
pdb|3HAC|B Chain B, The Structure Of Dpp-4 In Complex With Piperidine Fused
Imidazopyridine 34
Length = 728
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 334
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 391
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 392 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 451 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 506
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 507 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 561 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 620
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 621 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 680
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 681 ISKALVDVGVDFQAMWYTDEDH 702
>pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1J2E|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1WCY|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|1WCY|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|3VJM|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJM|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJK|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJK|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJL|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
pdb|3VJL|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
Length = 740
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 164 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 223
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 224 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 283
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 284 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 340
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 341 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 397
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 398 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 456
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 457 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 512
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 513 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 566
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 567 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 626
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 627 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 686
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 687 ISKALVDVGVDFQAMWYTDEDH 708
>pdb|1N1M|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|1N1M|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|1NU6|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv)
pdb|1NU6|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv)
pdb|1NU8|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv) In Complex With Diprotin A (Ili)
pdb|1NU8|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv) In Complex With Diprotin A (Ili)
pdb|1TK3|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase IvCD26
pdb|1TK3|B Chain B, Crystal Structure Of Human Apo Dipeptidyl Peptidase IvCD26
pdb|1TKR|A Chain A, Human Dipeptidyl Peptidase IvCD26 INHIBITED WITH
DIISOPROPYL Fluorophosphate
pdb|1TKR|B Chain B, Human Dipeptidyl Peptidase IvCD26 INHIBITED WITH
DIISOPROPYL Fluorophosphate
pdb|1W1I|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1RWQ|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With
5-Aminomethyl-6-(2,4-
Dichloro-Phenyl)-2-(3,
5-Dimethoxy-Phenyl)-Pyrimidin-4-Ylamine
pdb|1RWQ|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With
5-Aminomethyl-6-(2,4-
Dichloro-Phenyl)-2-(3,
5-Dimethoxy-Phenyl)-Pyrimidin-4-Ylamine
pdb|2BGN|A Chain A, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|B Chain B, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|C Chain C, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|D Chain D, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2AJL|I Chain I, X-Ray Structure Of Novel Biaryl-Based Dipeptidyl Peptidase
Iv Inhibitor
pdb|2AJL|J Chain J, X-Ray Structure Of Novel Biaryl-Based Dipeptidyl Peptidase
Iv Inhibitor
pdb|2BUB|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|2BUB|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|2OGZ|A Chain A, Crystal Structure Of Dpp-Iv Complexed With Lilly Aryl
Ketone Inhibitor
pdb|2OGZ|B Chain B, Crystal Structure Of Dpp-Iv Complexed With Lilly Aryl
Ketone Inhibitor
pdb|2OQI|A Chain A, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|B Chain B, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|C Chain C, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|D Chain D, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OLE|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complex With Cyclic Hydrazine Derivatives
pdb|2OLE|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complex With Cyclic Hydrazine Derivatives
pdb|3BJM|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With (1s,3s,
5s)-2-[(2s)-
2-Amino-2-(3-Hydroxytricyclo[3.3.1.13,7]dec-1-
Yl)acetyl]-2- Azabicyclo[3.1.0]hexane-3-Carbonitrile
(Cas), (1s,3s,5s)-2-((2s)-2-
Amino-2-(3-Hydroxyadamantan-1-
Yl)acetyl)-2-Azabicyclo[3.1.0]hexane- 3-Carbonitrile
(Iupac), Or Bms-477118
pdb|3BJM|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With (1s,3s,
5s)-2-[(2s)-
2-Amino-2-(3-Hydroxytricyclo[3.3.1.13,7]dec-1-
Yl)acetyl]-2- Azabicyclo[3.1.0]hexane-3-Carbonitrile
(Cas), (1s,3s,5s)-2-((2s)-2-
Amino-2-(3-Hydroxyadamantan-1-
Yl)acetyl)-2-Azabicyclo[3.1.0]hexane- 3-Carbonitrile
(Iupac), Or Bms-477118
pdb|3EIO|A Chain A, Crystal Structure Analysis Of Dppiv Inhibitor
pdb|3EIO|B Chain B, Crystal Structure Analysis Of Dppiv Inhibitor
pdb|3H0C|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|3H0C|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|3KWF|A Chain A, Human Dpp-Iv With Carmegliptin
(S)-1-((2s,3s,11bs)-2-Amino-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,1-
A]isoquinolin-3-Yl)-4-Fluoromethyl-Pyrrolidin-2-One
pdb|3KWF|B Chain B, Human Dpp-Iv With Carmegliptin
(S)-1-((2s,3s,11bs)-2-Amino-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,1-
A]isoquinolin-3-Yl)-4-Fluoromethyl-Pyrrolidin-2-One
pdb|3OC0|A Chain A, Structure Of Human Dpp-Iv With Hts Hit
(2s,3s,11bs)-3-Butyl-9,10-
Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3OC0|B Chain B, Structure Of Human Dpp-Iv With Hts Hit
(2s,3s,11bs)-3-Butyl-9,10-
Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3KWJ|A Chain A, Strucutre Of Human Dpp-Iv With
(2s,3s,11bs)-3-(3-Fluoromethyl-Phenyl)-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3KWJ|B Chain B, Strucutre Of Human Dpp-Iv With
(2s,3s,11bs)-3-(3-Fluoromethyl-Phenyl)-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|4DSA|A Chain A, Crystal Structure Of Dpp-iv With Compound C1
pdb|4DSA|B Chain B, Crystal Structure Of Dpp-iv With Compound C1
pdb|4DSZ|A Chain A, Crystal Structure Of Dpp-iv With Compound C2
pdb|4DSZ|B Chain B, Crystal Structure Of Dpp-iv With Compound C2
pdb|4DTC|A Chain A, Crystal Structure Of Dpp-iv With Compound C5
pdb|4DTC|B Chain B, Crystal Structure Of Dpp-iv With Compound C5
Length = 728
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 334
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 391
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 392 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 451 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 506
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 507 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 561 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 620
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 621 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 680
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 681 ISKALVDVGVDFQAMWYTDEDH 702
>pdb|2RGU|A Chain A, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor
pdb|2RGU|B Chain B, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor
Length = 734
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 334
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 391
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 392 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 451 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 506
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 507 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 561 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 620
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 621 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 680
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 681 ISKALVDVGVDFQAMWYTDEDH 702
>pdb|3Q8W|A Chain A, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv
Complex
pdb|3Q8W|B Chain B, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv
Complex
Length = 732
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 334
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 391
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 392 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 451 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 506
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 507 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 561 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 620
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 621 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 680
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 681 ISKALVDVGVDFQAMWYTDEDH 702
>pdb|2G5P|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ac
pdb|2G5P|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ac
pdb|2G5T|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ag
pdb|2G5T|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ag
pdb|2G63|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2I03|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2OQV|A Chain A, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidine-
Constrained Phenethylamine
pdb|2OQV|B Chain B, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidine-
Constrained Phenethylamine
pdb|2I78|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2OAG|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
Length = 726
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 334
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 391
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 392 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 451 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 506
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 507 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 561 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 620
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 621 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 680
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 681 ISKALVDVGVDFQAMWYTDEDH 702
>pdb|2ONC|A Chain A, Crystal Structure Of Human Dpp-4
pdb|2ONC|B Chain B, Crystal Structure Of Human Dpp-4
pdb|2ONC|C Chain C, Crystal Structure Of Human Dpp-4
pdb|2ONC|D Chain D, Crystal Structure Of Human Dpp-4
Length = 731
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 161 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 220
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 221 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 280
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 281 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 337
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 338 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 394
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 395 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 453
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 454 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 509
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 510 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 563
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 564 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 623
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 624 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 683
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 684 ISKALVDVGVDFQAMWYTDEDH 705
>pdb|1R9M|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution
Length = 733
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 163 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 222
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 223 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 282
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 283 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 339
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 340 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 396
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 397 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 455
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 456 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 511
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 512 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 565
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 566 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 625
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 626 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 685
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 686 ISKALVDVGVDFQAMWYTDEDH 707
>pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
pdb|2JID|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
Length = 736
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 166 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 225
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 226 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 285
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 286 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 342
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 343 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 399
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 400 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 458
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 459 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 514
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 515 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 568
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 569 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 628
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 629 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 688
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 689 ISKALVDVGVDFQAMWYTDEDH 710
>pdb|2BGR|A Chain A, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides
Tat(1-9) Bound To The Active Site Of Dipeptidyl
Peptidase Iv (Cd26)
pdb|2BGR|B Chain B, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides
Tat(1-9) Bound To The Active Site Of Dipeptidyl
Peptidase Iv (Cd26)
Length = 738
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 168 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 227
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 228 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 287
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 288 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 344
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 345 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 401
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 402 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 460
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 461 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 516
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 517 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 570
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 571 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 630
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 631 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 690
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 691 ISKALVDVGVDFQAMWYTDEDH 712
>pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
pdb|4A5S|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
Length = 740
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 334
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 391
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 392 NLYKIQLI-DYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 451 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 506
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 507 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 561 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 620
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 621 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 680
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 681 ISKALVDVGVDFQAMWYTDEDH 702
>pdb|1U8E|A Chain A, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F
pdb|1U8E|B Chain B, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F
Length = 728
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 238/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 278 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 334
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 391
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 392 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I N+ Y + P D+S+ Y L+
Sbjct: 451 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLL 506
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
V+ GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 507 DVFAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 561 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 620
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 621 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 680
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 681 ISKALVDVGVDFQAMWYTDEDH 702
>pdb|3QBJ|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
pdb|3QBJ|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
Length = 748
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 237/562 (42%), Gaps = 41/562 (7%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 166 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 225
Query: 70 YPFAGASNVKVRLGVVS--AAGGPVSWMDLQCGG-TDQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ VV+ + + +Q + YL V W ++ Q
Sbjct: 226 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 285
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEE-----LDSWVNLHDCFTPLDKGVTKYSGGFI 179
L R Q + + + +D +G+ ++ + WV F P + T F
Sbjct: 286 LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR---FRPSEPHFTLDGNSFY 342
Query: 180 -WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQ--VYFTGTLDG-PLES 235
S + G+RH+ I+ IT+G W +++G+ + Y + G P
Sbjct: 343 KIISNEEGYRHICYFQIDKKDCTFITKGTW---EVIGIEALTSDYLYYISNEYKGMPGGR 399
Query: 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295
+LY +L D+ +L + ++ +V + S P L S +
Sbjct: 400 NLYKIQL-SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 458
Query: 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYGPPPYKTLI 353
+ L + ++ +Q+ + I + Y + P D+S+ Y L+
Sbjct: 459 KGLRVLEDNSALDKMLQNVQMPSKKLDFIILAETKFWYQMILPPHFDKSK----KYPLLL 514
Query: 354 SVYGGPCVQLVCDSWINTVDMR---AQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409
VY GPC Q +TV R A YL S + I+V D RG+ +G K +I
Sbjct: 515 DVYAGPCSQKA-----DTV-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 568
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTS 469
G + EDQ+ A K G I ++ L VF+C ++ APV+
Sbjct: 569 GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR 628
Query: 470 WDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTAR 526
W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+NVHF+ +A+
Sbjct: 629 WEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQ 688
Query: 527 LINALVAARKPYEILIFPDERH 548
+ ALV ++ + + DE H
Sbjct: 689 ISKALVDVGVDFQAMWYTDEDH 710
>pdb|1ORV|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORV|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORV|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORV|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORW|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|1ORW|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|1ORW|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|1ORW|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|2BUA|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUA|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUA|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUA|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUC|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2BUC|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2BUC|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2BUC|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2AJ8|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJ8|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJ8|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJ8|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJB|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJB|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJB|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJB|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJC|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJC|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJC|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJC|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJD|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
pdb|2AJD|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
pdb|2AJD|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
pdb|2AJD|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
Length = 728
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 236/571 (41%), Gaps = 59/571 (10%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 158 NGVTDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRIP 217
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYD----------EEYLARVNWMHG 119
YP AGA N V+ VV L + +Y + YL V W+
Sbjct: 218 YPKAGAENPTVKFFVVDT-------RTLSPNASVTSYQIVPPASVLIGDHYLCGVTWVTE 270
Query: 120 NILTAQVLNRSQ--TKLKVLKFDIKTGQ------RKVILVEELDSWVNLHDCFTPLDKGV 171
++ Q + R+Q + + + +D TG+ R+ I + WV F P +
Sbjct: 271 ERISLQWIRRAQNYSIIDICDYDESTGRWISSVARQHIEISTT-GWVGR---FRPAEPHF 326
Query: 172 TKYSGGFI-WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV--YFTGT 228
T F S + G++H+ + + IT+G W +++G+ + Y +
Sbjct: 327 TSDGNSFYKIISNEEGYKHICHFQTDKSNCTFITKGAW---EVIGIEALTSDYLYYISNE 383
Query: 229 LDG-PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRI 287
G P +LY +L D+ +L + ++ + N + P
Sbjct: 384 HKGMPGGRNLYRIQL-NDYTKVTCLSCELNPERCQYYSASFSNKAKYYQLRCFGPGLPLY 442
Query: 288 LLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP--DESRYG 345
L S + L + ++ +Q+ + I + Y + P D+S+
Sbjct: 443 TLHSSSSDKELRVLEDNSALDKMLQDVQMPSKKLDVINLHGTKFWYQMILPPHFDKSK-- 500
Query: 346 PPPYKTLISVYGGPCVQLVCD----SWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLK 400
Y LI VY GPC Q V SW A YL S + I+V D RG+ +G K
Sbjct: 501 --KYPLLIEVYAGPCSQKVDTVFRLSW-------ATYLASTENIIVASFDGRGSGYQGDK 551
Query: 401 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQC 460
+I G + EDQ+ K G I ++ L VF+C
Sbjct: 552 IMHAINRRLGTFEVEDQIEATRQFSKMGFVDDKRIAIWGWSYGGYVTSMVLGAGSGVFKC 611
Query: 461 AVSGAPVTSWDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGMIDE 517
++ APV+ W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG D+
Sbjct: 612 GIAVAPVSKWEYYDSVYTERYMGLPTPEDNLDYYRNSTVMSRAENFKQVEYLLIHGTADD 671
Query: 518 NVHFRHTARLINALVAARKPYEILIFPDERH 548
NVHF+ +A+L ALV A ++ + + DE H
Sbjct: 672 NVHFQQSAQLSKALVDAGVDFQTMWYTDEDH 702
>pdb|1XFD|A Chain A, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
pdb|1XFD|B Chain B, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
pdb|1XFD|C Chain C, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
pdb|1XFD|D Chain D, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
Length = 723
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/555 (23%), Positives = 232/555 (41%), Gaps = 33/555 (5%)
Query: 11 HGLAEYIAQEE-MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGS--EAQED 67
+GL++++ +EE + +WWS D +A+ ++ S +P + + GS +
Sbjct: 160 NGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL----PTYTGSIYPTVKP 215
Query: 68 HAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVL 127
+ YP AG+ N + L V+ GP +++ D E Y+ V W + L
Sbjct: 216 YHYPKAGSENPSISLHVI-GLNGPTHDLEMM-PPDDPRMREYYITMVKWATSTKVAVTWL 273
Query: 128 NRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG- 186
NR+Q + D TG +E ++W++ + K K+ FI A + G
Sbjct: 274 NRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF--FIRAIPQGGR 331
Query: 187 --FRHLYLH----DINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 240
F H+ + + + + IT GDW V +I+ +E ++YF T D P LY A
Sbjct: 332 GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391
Query: 241 KLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSP--PRILLCSLQDGSLV 298
++N + L A H+M F+ + P P + + + D +
Sbjct: 392 NTVGNFNRQCLS-CDLVENCTYFSASFSHSMDFFLL---KCEGPGVPMVTVHNTTDKKKM 447
Query: 299 LPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGG 358
L I Q+ + I+ +D + L KP + Y L+ V G
Sbjct: 448 FDLETNEHVKKAINDRQMPKVEYRDIEIDDYNLPMQIL-KP-ATFTDTTHYPLLLVVDGT 505
Query: 359 PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQL 418
P Q V + + V + S G +V K D RG+ +G K ++ G ++ +DQ+
Sbjct: 506 PGSQSVAEKF--EVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQM 563
Query: 419 TGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPD----VFQCAVSGAPVTSWDGYD 474
++K+ + L + F C + +P+T + Y
Sbjct: 564 EAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA 623
Query: 475 TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVA 533
+ ++E+Y+GL D YE + V H V ++ + L++H DE +HF+HTA LI L+
Sbjct: 624 SAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIR 683
Query: 534 ARKPYEILIFPDERH 548
+ Y + I+PDE H
Sbjct: 684 GKANYSLQIYPDESH 698
>pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat
pdb|2GBC|B Chain B, Native Dpp-Iv (Cd26) From Rat
pdb|2GBF|A Chain A, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #1
pdb|2GBF|B Chain B, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #1
pdb|2GBG|A Chain A, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #2
pdb|2GBG|B Chain B, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #2
pdb|2GBI|A Chain A, Rat Dpp-Iv With Xanthine Inhibitor 4
pdb|2GBI|B Chain B, Rat Dpp-Iv With Xanthine Inhibitor 4
pdb|2I3Z|A Chain A, Rat Dpp-iv With Xanthine Mimetic Inhibitor #7
pdb|2I3Z|B Chain B, Rat Dpp-iv With Xanthine Mimetic Inhibitor #7
pdb|2OAE|A Chain A, Crystal Structure Of Rat Dipeptidyl Peptidase (Dppiv) With
Thiazole-Based Peptide Mimetic #31
pdb|2OAE|B Chain B, Crystal Structure Of Rat Dipeptidyl Peptidase (Dppiv) With
Thiazole-Based Peptide Mimetic #31
pdb|4FFV|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With 11a19 Fab
pdb|4FFV|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With 11a19 Fab
pdb|4FFW|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With Fab + Sitagliptin
pdb|4FFW|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With Fab + Sitagliptin
Length = 730
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 237/574 (41%), Gaps = 62/574 (10%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EE+ + WWS + F+A+ Q + + +P S+
Sbjct: 157 NGINDWVYEEEIFGAYSALWWSPNGTFLAYAQFNDTGVPLIEYSFYSDESLQYPKTVWIP 216
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT---DQNYDEEYLARVNWMHGNILTAQV 126
YP AGA N V+ +V+ + + T + YL V W+ + ++ Q
Sbjct: 217 YPKAGAVNPTVKFFIVNTDSLSSTTTTIPMQITAPASVTTGDHYLCDVAWVSEDRISLQW 276
Query: 127 LNRSQ--TKLKVLKFDIKTGQRKVILVEELDSWVNLHDC--FTPLDKGVTKYSGGFI-WA 181
L R Q + + + +D T +E C F P + T F
Sbjct: 277 LRRIQNYSVMAICDYDKTTLVWNCPTTQEHIETSATGWCGRFRPAEPHFTSDGSSFYKIV 336
Query: 182 SEKTGFRHLYLHDIN---GTCLGPITEGDWMVEQIVGVNEASGQVYFTGT--LDGPLESH 236
S+K G++H+ + IT+G W V I + S +Y+ + P +
Sbjct: 337 SDKDGYKHICQFQKDRKPEQVCTFITKGAWEVISIEAL--TSDYLYYISNEYKEMPGGRN 394
Query: 237 LYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296
LY ++LT+ K D N + SL + +
Sbjct: 395 LY--------------KIQLTDHTNKKCLSCDLNPERCQYYSVSLSKEAKYYQLGCRGPG 440
Query: 297 LVLPLY-------EQPLTV--------PRIKRLQLEPPDIVQIQANDGTVLYGALYKP-- 339
L PLY ++ L V ++ +Q+ + I N+ Y + P
Sbjct: 441 L--PLYTLHRSTDQKELRVLEDNSALDKMLQDVQMPSKKLDFIVLNETRFWYQMILPPHF 498
Query: 340 DESRYGPPPYKTLISVYGGPCVQLVCDSW-INTVDMRAQYLRS-KGILVWKLDNRGTARR 397
D+S+ Y LI VY GPC Q ++ +N A YL S + I+V D RG+ +
Sbjct: 499 DKSK----KYPLLIDVYAGPCSQKADAAFRLN----WATYLASTENIIVASFDGRGSGYQ 550
Query: 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDV 457
G K +I G ++ EDQ+ A +K G + ++ L V
Sbjct: 551 GDKIMHAINKRLGTLEVEDQIEAARQFLKMGFVDSKRVAIWGWSYGGYVTSMVLGSGSGV 610
Query: 458 FQCAVSGAPVTSWDGYDTFYTEKYMGLPS-EDPVG-YEYSSVMHHVHKMKG-KLLLVHGM 514
F+C ++ APV+ W+ YD+ YTE+YMGLP+ ED + Y S+VM K + LL+HG
Sbjct: 611 FKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGT 670
Query: 515 IDENVHFRHTARLINALVAARKPYEILIFPDERH 548
D+NVHF+ +A++ ALV A ++ + + DE H
Sbjct: 671 ADDNVHFQQSAQISKALVDAGVDFQAMWYTDEDH 704
>pdb|2QZP|A Chain A, Crystal Structure Of Mutation Of An Acylptide
HydrolaseESTERASE FROM AEROPYRUM PERNIX K1
pdb|2QZP|B Chain B, Crystal Structure Of Mutation Of An Acylptide
HydrolaseESTERASE FROM AEROPYRUM PERNIX K1
Length = 562
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 124/295 (42%), Gaps = 29/295 (9%)
Query: 273 NFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVL 332
V H SL +PPRI+ SL G PL E L P R + +V +++ DG+ +
Sbjct: 274 KLVTSHTSLSTPPRIV--SLPSGE---PLLEGGL--PEDLRRSIAGSRLVWVESFDGSRV 326
Query: 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392
+ ES P P T++ V+GGP + DSW D A L + G V + R
Sbjct: 327 PTYVL---ESGRAPTPGPTVVLVHGGPFAE-DSDSW----DTFAASLAAAGFHVVMPNYR 378
Query: 393 GTARRGLKFEASIKHN-CGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITL 451
G+ G ++ I + CG + ED A W + GLA +I A+T+
Sbjct: 379 GSTGYGEEWRLKIIGDPCGG-ELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTM 437
Query: 452 ARFPDVFQCAVSGAPVTSW-------DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM 504
P +F+ V+GA V W D + E+ G E S ++HV ++
Sbjct: 438 K--PGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI---MRSRSPINHVDRI 492
Query: 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 559
K L L+H D + RL+ L+A K +E I PD H D + +
Sbjct: 493 KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKI 547
>pdb|1VE6|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
Aeropyrum Pernix K1
pdb|1VE6|B Chain B, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
Aeropyrum Pernix K1
pdb|1VE7|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
AEROPYRUM Pernix K1 In Complex With P-Nitrophenyl
Phosphate
pdb|1VE7|B Chain B, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
AEROPYRUM Pernix K1 In Complex With P-Nitrophenyl
Phosphate
pdb|2HU5|A Chain A, Binding Of Inhibitors By Acylaminoacyl-Peptidase
pdb|2HU5|B Chain B, Binding Of Inhibitors By Acylaminoacyl-Peptidase
pdb|2HU7|A Chain A, Binding Of Inhibitors By Acylaminoacyl Peptidase
pdb|2HU7|B Chain B, Binding Of Inhibitors By Acylaminoacyl Peptidase
pdb|3O4G|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4G|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4G|C Chain C, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4G|D Chain D, Structure And Catalysis Of Acylaminoacyl Peptidase
Length = 582
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 121/284 (42%), Gaps = 29/284 (10%)
Query: 273 NFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVL 332
V H SL +PPRI+ SL G PL E L P R + +V +++ DG+ +
Sbjct: 294 KLVTSHTSLSTPPRIV--SLPSGE---PLLEGGL--PEDLRRSIAGSRLVWVESFDGSRV 346
Query: 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392
+ ES P P T++ V+GGP + DSW D A L + G V + R
Sbjct: 347 PTYVL---ESGRAPTPGPTVVLVHGGPFAE-DSDSW----DTFAASLAAAGFHVVMPNYR 398
Query: 393 GTARRGLKFEASIKHN-CGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITL 451
G+ G ++ I + CG + ED A W + GLA +I A+T+
Sbjct: 399 GSTGYGEEWRLKIIGDPCGG-ELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTM 457
Query: 452 ARFPDVFQCAVSGAPVTSW-------DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM 504
P +F+ V+GA V W D + E+ G E S ++HV ++
Sbjct: 458 K--PGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI---MRSRSPINHVDRI 512
Query: 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
K L L+H D + RL+ L+A K +E I PD H
Sbjct: 513 KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGH 556
>pdb|2HU8|A Chain A, Binding Of Inhibitors By Acylaminoacyl Peptidase
pdb|2HU8|B Chain B, Binding Of Inhibitors By Acylaminoacyl Peptidase
Length = 582
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 121/284 (42%), Gaps = 29/284 (10%)
Query: 273 NFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVL 332
V H SL +PPRI+ SL G PL E L P R + +V +++ DG+ +
Sbjct: 294 KLVTSHTSLSTPPRIV--SLPSGE---PLLEGGL--PEDLRRSIAGSRLVWVESFDGSRV 346
Query: 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392
+ ES P P T++ V+GGP + DSW D A L + G V + R
Sbjct: 347 PTYVL---ESGRAPTPGPTVVLVHGGPFAE-DSDSW----DTFAASLAAAGFHVVMPNYR 398
Query: 393 GTARRGLKFEASIKHN-CGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITL 451
G+ G ++ I + CG + ED A W + GLA +I A+T+
Sbjct: 399 GSTGYGEEWRLKIIGDPCGG-ELEDVSAAARWARESGLASELYIMGYAYGGYMTLCALTM 457
Query: 452 ARFPDVFQCAVSGAPVTSW-------DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM 504
P +F+ V+GA V W D + E+ G E S ++HV ++
Sbjct: 458 K--PGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI---MRSRSPINHVDRI 512
Query: 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
K L L+H D + RL+ L+A K +E I PD H
Sbjct: 513 KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGH 556
>pdb|2QR5|A Chain A, Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mutant
pdb|2QR5|B Chain B, Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mutant
Length = 582
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 120/284 (42%), Gaps = 29/284 (10%)
Query: 273 NFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVL 332
V H SL +PPRI+ SL G PL E L P R + +V +++ DG+ +
Sbjct: 294 KLVTSHTSLSTPPRIV--SLPSGE---PLLEGGL--PEDLRRSIAGSRLVWVESFDGSRV 346
Query: 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392
+ ES P P T++ V GGP + DSW D A L + G V + R
Sbjct: 347 PTYVL---ESGRAPTPGPTVVLVAGGPFAE-DSDSW----DTFAASLAAAGFHVVMPNYR 398
Query: 393 GTARRGLKFEASIKHN-CGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITL 451
G+ G ++ I + CG + ED A W + GLA +I A+T+
Sbjct: 399 GSTGYGEEWRLKIIGDPCGG-ELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTM 457
Query: 452 ARFPDVFQCAVSGAPVTSW-------DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM 504
P +F+ V+GA V W D + E+ G E S ++HV ++
Sbjct: 458 K--PGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI---MRSRSPINHVDRI 512
Query: 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
K L L+H D + RL+ L+A K +E I PD H
Sbjct: 513 KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGH 556
>pdb|3O4J|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4J|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4J|C Chain C, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4J|D Chain D, Structure And Catalysis Of Acylaminoacyl Peptidase
Length = 582
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 121/284 (42%), Gaps = 29/284 (10%)
Query: 273 NFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVL 332
V H SL +PPRI+ SL G PL E L P R + +V +++ DG+ +
Sbjct: 294 KLVTSHTSLSTPPRIV--SLPSGE---PLLEGGL--PEDLRRSIAGSRLVWVESFDGSRV 346
Query: 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392
+ ES P P T++ V+GGP + DSW D A L + G V + R
Sbjct: 347 PTYVL---ESGRAPTPGPTVVLVHGGPFAE-DSDSW----DTFAASLAAAGFHVVMPNYR 398
Query: 393 GTARRGLKFEASIKHN-CGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITL 451
G+ G ++ I + CG + ED A W + GLA +I A+T+
Sbjct: 399 GSTGYGEEWRLKIIGDPCGG-ELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTM 457
Query: 452 ARFPDVFQCAVSGAPVTSW-------DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM 504
P +F+ V+GA V W D + E+ G E S ++HV ++
Sbjct: 458 K--PGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI---MRSRSPINHVDRI 512
Query: 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
K L L+H + + RL+ L+A K +E I PD H
Sbjct: 513 KEPLALIHPQNNSRTPLKPLLRLMGELLARGKTFEAHIIPDAGH 556
>pdb|3O4H|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4H|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4H|C Chain C, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4H|D Chain D, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4I|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4I|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
Length = 582
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 120/284 (42%), Gaps = 29/284 (10%)
Query: 273 NFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVL 332
V H SL +PPRI+ SL G PL E L P R + +V +++ DG+ +
Sbjct: 294 KLVTSHTSLSTPPRIV--SLPSGE---PLLEGGL--PEDLRRSIAGSRLVWVESFDGSRV 346
Query: 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392
+ ES P P T++ V+GGP + DSW D A L + G V + R
Sbjct: 347 PTYVL---ESGRAPTPGPTVVLVHGGPFAE-DSDSW----DTFAASLAAAGFHVVMPNYR 398
Query: 393 GTARRGLKFEASIKHN-CGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXXAITL 451
G+ G ++ I + CG + ED A W + GLA +I A+T+
Sbjct: 399 GSTGYGEEWRLKIIGDPCGG-ELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTM 457
Query: 452 ARFPDVFQCAVSGAPVTSW-------DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM 504
P +F+ V+GA V W D + E+ G E S ++HV ++
Sbjct: 458 K--PGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI---MRSRSPINHVDRI 512
Query: 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
K L L+H + RL+ L+A K +E I PD H
Sbjct: 513 KEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGH 556
>pdb|3AZO|A Chain A, Crystal Structure Of Puromycin Hydrolase
pdb|3AZO|B Chain B, Crystal Structure Of Puromycin Hydrolase
Length = 662
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 21/256 (8%)
Query: 319 PDIVQIQANDGTVLYGALYKPDESRY-GP----PPYKTLISVYGGPCVQLVCDSWINTVD 373
P I A DG ++ +Y P + GP PPY ++ +GGP ++ +D
Sbjct: 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPY--VVXAHGGPTSRVPA-----VLD 443
Query: 374 MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVG 433
+ Y S+GI V ++ G+ G + ++ G +D ED A L ++G A
Sbjct: 444 LDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRA 503
Query: 434 HIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPV---TSW-DG----YDTFYTEKYMGLP 485
+ A +L DV+ C PV W DG +++ Y + +G
Sbjct: 504 RLAVRGGSAGGWTAASSLVST-DVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSF 562
Query: 486 SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545
E P Y + + +++ LL+ G+ D R + A+ P+ L F
Sbjct: 563 EEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEG 622
Query: 546 ERHMPRRHRDRIYMEE 561
E H RR + E
Sbjct: 623 EGHGFRRKETXVRALE 638
>pdb|3AZP|A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant
pdb|3AZP|B Chain B, Crystal Structure Of Puromycin Hydrolase S511a Mutant
pdb|3AZQ|A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant
Complexed With Pgg
pdb|3AZQ|B Chain B, Crystal Structure Of Puromycin Hydrolase S511a Mutant
Complexed With Pgg
Length = 662
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 21/247 (8%)
Query: 319 PDIVQIQANDGTVLYGALYKPDESRY-GP----PPYKTLISVYGGPCVQLVCDSWINTVD 373
P I A DG ++ +Y P + GP PPY ++ +GGP ++ +D
Sbjct: 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPY--VVMAHGGPTSRVPA-----VLD 443
Query: 374 MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVG 433
+ Y S+GI V ++ G+ G + ++ G +D ED A L ++G A
Sbjct: 444 LDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRA 503
Query: 434 HIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPV---TSW-DG----YDTFYTEKYMGLP 485
+ A +L DV+ C PV W DG +++ Y + +G
Sbjct: 504 RLAVRGGAAGGWTAASSLVST-DVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSF 562
Query: 486 SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545
E P Y + + +++ LL+ G+ D R + A+ P+ L F
Sbjct: 563 EEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEG 622
Query: 546 ERHMPRR 552
E H RR
Sbjct: 623 EGHGFRR 629
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 229 LDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFH 278
L+G ++ HL +L DW+ + PVK+ GK D FV+F+
Sbjct: 229 LEGKIKPHLMSQELPEDWD---KQPVKVLVGKNFEDVAFDEKKNVFVEFY 275
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,662,582
Number of Sequences: 62578
Number of extensions: 821800
Number of successful extensions: 1897
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1729
Number of HSP's gapped (non-prelim): 44
length of query: 571
length of database: 14,973,337
effective HSP length: 104
effective length of query: 467
effective length of database: 8,465,225
effective search space: 3953260075
effective search space used: 3953260075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)