Query 008274
Match_columns 571
No_of_seqs 326 out of 3993
Neff 10.4
Searched_HMMs 46136
Date Thu Mar 28 21:43:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008274.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008274hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2281 Dipeptidyl aminopeptid 100.0 7.8E-69 1.7E-73 517.9 40.5 553 8-570 250-867 (867)
2 KOG2100 Dipeptidyl aminopeptid 100.0 2.5E-59 5.3E-64 495.5 54.9 543 9-570 192-747 (755)
3 COG1506 DAP2 Dipeptidyl aminop 100.0 2.4E-46 5.2E-51 395.1 47.1 498 23-571 101-617 (620)
4 PRK10115 protease 2; Provision 100.0 1.8E-44 4E-49 382.3 49.8 482 25-570 129-675 (686)
5 PF00930 DPPIV_N: Dipeptidyl p 100.0 2.5E-40 5.5E-45 328.1 26.9 264 8-285 85-353 (353)
6 COG1770 PtrB Protease II [Amin 100.0 1.6E-31 3.4E-36 263.9 42.3 482 23-569 129-677 (682)
7 PF00326 Peptidase_S9: Prolyl 100.0 5.7E-33 1.2E-37 256.7 15.5 199 373-571 4-210 (213)
8 COG1505 Serine proteases of th 100.0 2.8E-26 6E-31 223.9 36.8 292 266-571 346-647 (648)
9 KOG2237 Predicted serine prote 100.0 1.1E-25 2.4E-30 220.6 35.4 293 270-570 392-705 (712)
10 PRK13604 luxD acyl transferase 99.9 1.5E-23 3.3E-28 196.1 19.2 213 319-551 9-246 (307)
11 PRK10566 esterase; Provisional 99.9 7.2E-23 1.6E-27 194.5 21.9 225 332-571 12-249 (249)
12 PRK05077 frsA fermentation/res 99.9 5.9E-22 1.3E-26 199.2 23.5 229 318-571 167-413 (414)
13 PLN02298 hydrolase, alpha/beta 99.9 1.1E-21 2.4E-26 194.2 22.6 240 318-571 31-318 (330)
14 PLN02442 S-formylglutathione h 99.9 1.4E-21 3E-26 187.5 20.5 245 317-570 16-280 (283)
15 PHA02857 monoglyceride lipase; 99.9 1.4E-21 3.1E-26 188.6 20.6 226 325-570 6-273 (276)
16 TIGR02821 fghA_ester_D S-formy 99.9 1E-20 2.2E-25 181.3 22.8 242 318-571 12-275 (275)
17 KOG1455 Lysophospholipase [Lip 99.9 2.8E-21 6.1E-26 175.0 17.4 240 317-570 25-312 (313)
18 PRK10749 lysophospholipase L2; 99.9 2.8E-21 6E-26 190.7 18.9 239 317-570 28-329 (330)
19 PLN02385 hydrolase; alpha/beta 99.9 4.6E-21 1E-25 190.9 19.5 237 320-571 62-346 (349)
20 PRK05137 tolB translocation pr 99.9 5.1E-20 1.1E-24 188.6 25.8 213 25-302 204-420 (435)
21 PRK04043 tolB translocation pr 99.9 6.6E-20 1.4E-24 184.3 25.5 209 27-301 192-407 (419)
22 PF01738 DLH: Dienelactone hyd 99.9 4.3E-21 9.2E-26 177.8 15.6 204 332-571 1-218 (218)
23 PLN02652 hydrolase; alpha/beta 99.8 9.1E-20 2E-24 181.8 20.2 234 319-571 110-388 (395)
24 PRK03629 tolB translocation pr 99.8 3.3E-19 7.1E-24 181.5 24.7 211 26-302 202-414 (429)
25 PRK04792 tolB translocation pr 99.8 4E-19 8.7E-24 181.5 24.5 211 26-302 221-433 (448)
26 COG1647 Esterase/lipase [Gener 99.8 8E-20 1.7E-24 157.2 14.5 202 350-569 16-243 (243)
27 PRK10162 acetyl esterase; Prov 99.8 6.6E-19 1.4E-23 172.0 22.5 228 319-571 57-316 (318)
28 PRK02889 tolB translocation pr 99.8 8.1E-19 1.8E-23 178.9 23.9 210 26-301 199-410 (427)
29 COG0412 Dienelactone hydrolase 99.8 5.4E-19 1.2E-23 163.2 20.3 214 320-571 3-234 (236)
30 PRK00178 tolB translocation pr 99.8 1.1E-18 2.4E-23 179.1 24.3 210 26-301 202-413 (430)
31 PRK01029 tolB translocation pr 99.8 1.7E-18 3.6E-23 175.5 24.9 213 26-303 188-412 (428)
32 COG2267 PldB Lysophospholipase 99.8 5.7E-19 1.2E-23 169.3 18.9 232 318-571 8-295 (298)
33 PRK04922 tolB translocation pr 99.8 3.5E-18 7.5E-23 174.9 24.7 211 26-302 207-419 (433)
34 PF05448 AXE1: Acetyl xylan es 99.8 3.8E-19 8.2E-24 171.3 13.9 234 318-570 55-320 (320)
35 TIGR01840 esterase_phb esteras 99.8 7.8E-19 1.7E-23 161.7 14.7 193 334-534 1-197 (212)
36 KOG1552 Predicted alpha/beta h 99.8 2.3E-18 4.9E-23 153.3 16.9 217 318-569 34-251 (258)
37 PRK11460 putative hydrolase; P 99.8 9.4E-18 2E-22 156.0 17.8 185 347-571 14-209 (232)
38 PRK10985 putative hydrolase; P 99.8 2E-17 4.4E-22 162.6 19.9 235 318-570 30-320 (324)
39 KOG4391 Predicted alpha/beta h 99.8 5.3E-18 1.1E-22 144.6 12.0 224 318-569 53-281 (300)
40 PRK00870 haloalkane dehalogena 99.8 4.4E-17 9.6E-22 159.3 20.4 236 311-570 14-301 (302)
41 PLN02511 hydrolase 99.8 2.8E-17 6.1E-22 164.9 19.1 237 318-570 70-365 (388)
42 PRK01029 tolB translocation pr 99.8 1.4E-16 3.1E-21 161.5 24.2 193 80-303 165-368 (428)
43 PRK04043 tolB translocation pr 99.8 2.8E-16 6E-21 158.2 24.6 192 79-304 168-367 (419)
44 COG0823 TolB Periplasmic compo 99.8 4.1E-17 8.9E-22 162.7 18.4 208 25-296 195-404 (425)
45 PRK05371 x-prolyl-dipeptidyl a 99.8 2.9E-17 6.3E-22 176.0 18.5 191 375-571 271-520 (767)
46 TIGR03343 biphenyl_bphD 2-hydr 99.8 3.9E-17 8.4E-22 158.3 17.9 201 350-568 31-281 (282)
47 TIGR03100 hydr1_PEP hydrolase, 99.7 1.2E-16 2.6E-21 153.1 19.7 231 320-569 3-274 (274)
48 TIGR01607 PST-A Plasmodium sub 99.7 3.9E-17 8.6E-22 160.5 16.5 234 324-568 2-331 (332)
49 PF12695 Abhydrolase_5: Alpha/ 99.7 5.3E-17 1.1E-21 140.3 15.3 145 351-549 1-145 (145)
50 TIGR03611 RutD pyrimidine util 99.7 6.3E-17 1.4E-21 154.3 17.1 200 348-569 12-257 (257)
51 PRK01742 tolB translocation pr 99.7 3.5E-16 7.7E-21 159.8 23.2 205 25-302 206-412 (429)
52 PLN02824 hydrolase, alpha/beta 99.7 9.5E-17 2E-21 156.4 18.1 205 350-570 30-294 (294)
53 PF06500 DUF1100: Alpha/beta h 99.7 4.7E-17 1E-21 157.2 15.3 230 315-571 161-410 (411)
54 PRK03629 tolB translocation pr 99.7 2.2E-15 4.8E-20 153.5 28.5 191 80-303 179-372 (429)
55 TIGR02800 propeller_TolB tol-p 99.7 6.8E-16 1.5E-20 158.4 23.6 211 26-302 193-405 (417)
56 PRK03592 haloalkane dehalogena 99.7 2.1E-16 4.6E-21 154.0 18.9 212 328-570 15-289 (295)
57 PLN02965 Probable pheophorbida 99.7 1.3E-16 2.9E-21 151.8 17.1 198 351-569 5-252 (255)
58 TIGR02427 protocat_pcaD 3-oxoa 99.7 2.5E-17 5.5E-22 156.2 12.0 198 348-568 12-251 (251)
59 TIGR00976 /NonD putative hydro 99.7 2.6E-16 5.7E-21 165.5 20.5 133 325-470 2-134 (550)
60 TIGR03056 bchO_mg_che_rel puta 99.7 1.9E-16 4.1E-21 153.1 17.8 217 323-568 9-278 (278)
61 PRK05137 tolB translocation pr 99.7 1.5E-15 3.2E-20 155.8 25.1 191 79-302 181-374 (435)
62 TIGR02240 PHA_depoly_arom poly 99.7 2.2E-16 4.8E-21 152.2 18.1 213 328-570 10-266 (276)
63 COG0657 Aes Esterase/lipase [L 99.7 5.2E-16 1.1E-20 152.1 20.1 224 325-569 57-309 (312)
64 PRK10673 acyl-CoA esterase; Pr 99.7 1.9E-16 4.1E-21 151.1 16.5 200 347-570 14-255 (255)
65 PF02129 Peptidase_S15: X-Pro 99.7 1.3E-16 2.7E-21 152.9 14.6 212 328-549 1-271 (272)
66 PRK04792 tolB translocation pr 99.7 7.5E-15 1.6E-19 150.2 28.3 191 80-303 198-391 (448)
67 COG2945 Predicted hydrolase of 99.7 5.5E-16 1.2E-20 130.6 15.9 202 319-568 4-205 (210)
68 TIGR01250 pro_imino_pep_2 prol 99.7 5E-16 1.1E-20 150.7 18.3 201 349-568 25-288 (288)
69 PRK02889 tolB translocation pr 99.7 9.5E-15 2.1E-19 149.0 27.4 191 80-303 176-369 (427)
70 PLN02872 triacylglycerol lipas 99.7 3.6E-16 7.9E-21 155.3 16.3 248 312-570 38-389 (395)
71 PLN03087 BODYGUARD 1 domain co 99.7 1.3E-15 2.8E-20 154.0 19.8 224 323-569 179-478 (481)
72 PF02230 Abhydrolase_2: Phosph 99.7 7.1E-16 1.5E-20 142.3 16.4 189 347-571 12-216 (216)
73 KOG1515 Arylacetamide deacetyl 99.7 6.8E-15 1.5E-19 140.8 23.3 225 328-570 70-335 (336)
74 PLN02679 hydrolase, alpha/beta 99.7 6.7E-16 1.5E-20 154.0 17.1 202 350-569 89-356 (360)
75 PF10503 Esterase_phd: Esteras 99.7 7.4E-16 1.6E-20 138.9 15.6 193 332-534 1-198 (220)
76 COG3458 Acetyl esterase (deace 99.7 2.4E-16 5.1E-21 139.7 11.9 217 319-550 56-301 (321)
77 PRK10349 carboxylesterase BioH 99.7 9.5E-16 2.1E-20 146.2 16.6 192 350-569 14-255 (256)
78 COG0429 Predicted hydrolase of 99.7 1.6E-15 3.5E-20 139.8 16.7 234 317-570 47-340 (345)
79 PRK00178 tolB translocation pr 99.7 2.7E-14 5.8E-19 146.7 27.8 191 80-303 179-372 (430)
80 PRK01742 tolB translocation pr 99.7 2.5E-14 5.5E-19 146.2 27.1 184 80-302 184-369 (429)
81 PRK04922 tolB translocation pr 99.7 2.7E-14 5.9E-19 146.2 27.1 192 79-303 183-377 (433)
82 TIGR01738 bioH putative pimelo 99.7 1E-15 2.2E-20 144.6 15.6 190 350-567 5-245 (245)
83 TIGR01249 pro_imino_pep_1 prol 99.7 2.1E-15 4.6E-20 147.4 17.9 219 322-571 7-306 (306)
84 TIGR03695 menH_SHCHC 2-succiny 99.7 1.4E-15 3.1E-20 144.0 16.1 197 350-568 2-251 (251)
85 PRK06489 hypothetical protein; 99.7 4.1E-15 8.8E-20 148.7 19.6 208 349-570 69-357 (360)
86 PLN02894 hydrolase, alpha/beta 99.7 2.5E-15 5.4E-20 151.4 18.0 206 348-571 104-386 (402)
87 PRK14875 acetoin dehydrogenase 99.7 3.1E-15 6.7E-20 151.1 17.1 196 349-570 131-371 (371)
88 PLN02578 hydrolase 99.6 3.6E-15 7.8E-20 148.7 16.7 195 350-568 87-353 (354)
89 PLN00021 chlorophyllase 99.6 1.5E-14 3.3E-19 139.4 19.5 181 330-549 37-240 (313)
90 PRK11071 esterase YqiA; Provis 99.6 4.2E-15 9.2E-20 133.4 14.2 174 350-568 2-189 (190)
91 PRK11126 2-succinyl-6-hydroxy- 99.6 5.4E-15 1.2E-19 139.8 15.2 189 350-569 3-241 (242)
92 PRK07581 hypothetical protein; 99.6 6.7E-15 1.5E-19 146.3 16.4 229 328-571 24-337 (339)
93 PF12715 Abhydrolase_7: Abhydr 99.6 1.2E-15 2.5E-20 144.7 10.2 216 318-545 87-343 (390)
94 PF12697 Abhydrolase_6: Alpha/ 99.6 7.6E-16 1.6E-20 143.6 8.7 179 352-550 1-217 (228)
95 PF07859 Abhydrolase_3: alpha/ 99.6 1.3E-15 2.8E-20 140.6 10.1 178 352-550 1-209 (211)
96 TIGR03101 hydr2_PEP hydrolase, 99.6 4.4E-14 9.5E-19 132.3 19.7 211 321-546 2-243 (266)
97 TIGR01392 homoserO_Ac_trn homo 99.6 1.5E-14 3.1E-19 144.3 17.4 234 328-568 14-351 (351)
98 PRK03204 haloalkane dehalogena 99.6 1.2E-14 2.7E-19 140.4 16.5 196 350-567 35-285 (286)
99 PRK08775 homoserine O-acetyltr 99.6 5.8E-15 1.3E-19 146.7 14.2 177 378-570 94-339 (343)
100 COG0823 TolB Periplasmic compo 99.6 7.8E-14 1.7E-18 139.3 22.0 194 80-304 173-369 (425)
101 COG0400 Predicted esterase [Ge 99.6 2.2E-14 4.8E-19 127.9 16.1 182 347-570 16-205 (207)
102 TIGR01836 PHA_synth_III_C poly 99.6 3.1E-14 6.6E-19 141.9 18.8 223 332-570 48-350 (350)
103 KOG4178 Soluble epoxide hydrol 99.6 5E-14 1.1E-18 130.6 18.3 202 347-570 42-320 (322)
104 PRK00175 metX homoserine O-ace 99.6 3.6E-14 7.9E-19 142.5 18.2 236 328-570 31-374 (379)
105 KOG1838 Alpha/beta hydrolase [ 99.6 9.6E-14 2.1E-18 133.3 19.9 239 316-569 90-387 (409)
106 COG4099 Predicted peptidase [G 99.6 9.2E-15 2E-19 131.1 11.5 181 327-544 169-354 (387)
107 PLN03084 alpha/beta hydrolase 99.6 5E-14 1.1E-18 139.8 16.7 215 327-568 112-382 (383)
108 KOG4409 Predicted hydrolase/ac 99.6 1.1E-13 2.4E-18 128.5 17.3 220 328-570 74-364 (365)
109 PF08840 BAAT_C: BAAT / Acyl-C 99.6 4.7E-14 1E-18 128.8 14.1 157 414-571 3-211 (213)
110 PLN02211 methyl indole-3-aceta 99.6 4.7E-13 1E-17 128.1 20.7 200 348-568 17-268 (273)
111 KOG1454 Predicted hydrolase/ac 99.5 6.4E-13 1.4E-17 128.9 18.2 204 347-570 56-324 (326)
112 TIGR02800 propeller_TolB tol-p 99.5 1.2E-11 2.5E-16 127.1 27.9 191 79-302 169-362 (417)
113 KOG3043 Predicted hydrolase re 99.5 5.7E-13 1.2E-17 115.5 14.7 170 372-571 56-241 (242)
114 PRK06765 homoserine O-acetyltr 99.5 1.1E-12 2.3E-17 130.7 17.1 233 330-569 41-387 (389)
115 COG3509 LpqC Poly(3-hydroxybut 99.5 1.2E-12 2.6E-17 118.8 15.7 232 319-570 35-307 (312)
116 PRK10439 enterobactin/ferric e 99.5 3.6E-12 7.9E-17 127.5 20.0 205 317-550 178-392 (411)
117 KOG4667 Predicted esterase [Li 99.5 9.2E-13 2E-17 112.9 12.5 212 318-553 9-243 (269)
118 PLN02980 2-oxoglutarate decarb 99.5 2.4E-12 5.3E-17 150.0 19.8 211 348-570 1370-1639(1655)
119 COG2936 Predicted acyl esteras 99.4 6.4E-12 1.4E-16 126.1 17.4 216 317-549 17-291 (563)
120 PF00756 Esterase: Putative es 99.4 4E-13 8.6E-18 127.6 8.3 205 329-550 5-237 (251)
121 PRK05855 short chain dehydroge 99.4 5.4E-12 1.2E-16 135.6 16.2 216 326-569 9-291 (582)
122 COG4757 Predicted alpha/beta h 99.4 4.2E-12 9.1E-17 110.3 11.8 228 322-567 8-280 (281)
123 TIGR01838 PHA_synth_I poly(R)- 99.3 5.6E-11 1.2E-15 121.7 19.3 211 320-550 165-456 (532)
124 PF12740 Chlorophyllase2: Chlo 99.3 2.7E-11 5.9E-16 110.6 14.8 179 332-549 4-205 (259)
125 PF03403 PAF-AH_p_II: Platelet 99.3 1.7E-11 3.7E-16 121.4 13.9 189 347-571 98-359 (379)
126 COG4946 Uncharacterized protei 99.3 6.1E-11 1.3E-15 112.8 15.6 189 81-303 60-304 (668)
127 KOG3101 Esterase D [General fu 99.3 1.1E-11 2.5E-16 105.7 9.4 217 329-551 25-263 (283)
128 KOG4627 Kynurenine formamidase 99.3 9.5E-12 2.1E-16 105.8 8.3 206 314-549 40-247 (270)
129 KOG2564 Predicted acetyltransf 99.3 3.5E-11 7.6E-16 107.6 11.1 118 317-453 48-166 (343)
130 PF00561 Abhydrolase_1: alpha/ 99.2 5.5E-12 1.2E-16 118.0 4.8 169 384-563 1-228 (230)
131 KOG2984 Predicted hydrolase [G 99.2 6.9E-12 1.5E-16 106.3 4.4 202 351-570 44-276 (277)
132 PF00930 DPPIV_N: Dipeptidyl p 99.2 1E-09 2.3E-14 109.2 20.8 231 23-304 43-326 (353)
133 PF08538 DUF1749: Protein of u 99.2 2.2E-10 4.7E-15 106.7 12.7 220 333-568 21-303 (303)
134 PF14583 Pectate_lyase22: Olig 99.2 4.8E-08 1E-12 94.0 27.7 235 4-297 62-332 (386)
135 PF03583 LIP: Secretory lipase 99.2 7.6E-10 1.7E-14 106.0 14.7 186 375-570 18-281 (290)
136 COG0627 Predicted esterase [Ge 99.1 5.7E-10 1.2E-14 106.5 13.6 214 347-571 52-312 (316)
137 PRK07868 acyl-CoA synthetase; 99.1 1.3E-09 2.8E-14 123.1 18.7 231 318-570 38-361 (994)
138 PF05728 UPF0227: Uncharacteri 99.1 1.6E-09 3.4E-14 95.7 14.2 177 352-567 2-186 (187)
139 COG4188 Predicted dienelactone 99.1 4.7E-10 1E-14 106.3 11.4 121 329-456 49-182 (365)
140 COG3571 Predicted hydrolase of 99.1 5.9E-09 1.3E-13 85.3 15.5 185 350-569 15-210 (213)
141 COG2382 Fes Enterochelin ester 99.1 2.2E-09 4.9E-14 98.7 14.6 206 320-551 70-282 (299)
142 PF02273 Acyl_transf_2: Acyl t 99.1 4.4E-09 9.6E-14 92.6 15.5 207 321-550 4-238 (294)
143 KOG2382 Predicted alpha/beta h 99.1 2.9E-09 6.3E-14 99.3 14.7 205 347-570 50-313 (315)
144 KOG2624 Triglyceride lipase-ch 99.1 3.9E-09 8.4E-14 103.6 16.2 248 311-570 41-398 (403)
145 COG2819 Predicted hydrolase of 99.1 1.9E-08 4.2E-13 91.4 19.3 223 316-568 6-259 (264)
146 KOG3847 Phospholipase A2 (plat 99.1 2.1E-09 4.5E-14 97.9 12.8 189 347-571 116-372 (399)
147 PF06342 DUF1057: Alpha/beta h 99.1 7.5E-09 1.6E-13 94.2 16.2 130 320-467 7-136 (297)
148 COG2021 MET2 Homoserine acetyl 99.0 7.8E-09 1.7E-13 97.8 16.3 231 330-569 36-367 (368)
149 cd00312 Esterase_lipase Estera 99.0 3.4E-10 7.3E-15 118.6 7.9 128 332-469 79-214 (493)
150 PF02897 Peptidase_S9_N: Proly 99.0 1.2E-07 2.6E-12 97.1 26.4 244 27-297 128-408 (414)
151 TIGR01839 PHA_synth_II poly(R) 99.0 2.3E-08 5E-13 101.4 18.9 210 319-549 191-481 (560)
152 PF06821 Ser_hydrolase: Serine 99.0 2.1E-08 4.6E-13 87.7 14.3 152 352-550 1-154 (171)
153 KOG2112 Lysophospholipase [Lip 99.0 2.9E-08 6.3E-13 86.2 14.8 126 418-569 75-203 (206)
154 COG4946 Uncharacterized protei 98.9 4E-08 8.8E-13 94.0 15.3 125 80-229 382-509 (668)
155 COG2272 PnbA Carboxylesterase 98.9 2.7E-09 5.9E-14 104.6 7.5 130 332-469 80-218 (491)
156 cd00707 Pancreat_lipase_like P 98.9 7E-09 1.5E-13 98.9 10.1 113 348-469 35-148 (275)
157 COG0596 MhpC Predicted hydrola 98.9 6.4E-08 1.4E-12 92.0 16.7 195 350-567 22-279 (282)
158 PF07224 Chlorophyllase: Chlor 98.9 3.8E-08 8.2E-13 87.9 13.0 181 330-549 31-230 (307)
159 COG3208 GrsT Predicted thioest 98.9 7.8E-08 1.7E-12 85.9 14.9 177 375-568 26-234 (244)
160 PF09752 DUF2048: Uncharacteri 98.8 4.6E-08 1E-12 92.7 13.2 223 331-568 76-347 (348)
161 KOG1553 Predicted alpha/beta h 98.8 8E-09 1.7E-13 95.2 7.0 184 319-520 214-398 (517)
162 PF03959 FSH1: Serine hydrolas 98.8 4.4E-08 9.6E-13 89.7 11.7 175 348-550 3-202 (212)
163 PF00135 COesterase: Carboxyle 98.8 8.4E-09 1.8E-13 109.7 7.8 127 332-467 109-244 (535)
164 PF14583 Pectate_lyase22: Olig 98.8 9E-07 2E-11 85.3 20.5 210 27-297 40-276 (386)
165 TIGR03230 lipo_lipase lipoprot 98.7 5.2E-08 1.1E-12 97.1 10.2 113 348-468 40-154 (442)
166 PF10340 DUF2424: Protein of u 98.7 4.5E-07 9.7E-12 87.6 15.5 198 333-549 107-349 (374)
167 PF08662 eIF2A: Eukaryotic tra 98.7 3.9E-06 8.5E-11 75.5 19.1 152 25-229 8-164 (194)
168 PF11144 DUF2920: Protein of u 98.6 3.3E-06 7.1E-11 81.9 17.7 133 413-545 162-333 (403)
169 PF10230 DUF2305: Uncharacteri 98.6 4.7E-07 1E-11 85.7 12.0 192 349-550 2-265 (266)
170 PRK04940 hypothetical protein; 98.6 9E-07 1.9E-11 76.5 12.5 115 433-569 60-179 (180)
171 COG1073 Hydrolases of the alph 98.6 3.2E-07 7E-12 89.3 11.0 78 492-571 218-298 (299)
172 PF06057 VirJ: Bacterial virul 98.6 2.6E-06 5.7E-11 73.7 14.5 167 373-569 19-191 (192)
173 KOG0293 WD40 repeat-containing 98.5 1E-05 2.2E-10 76.6 17.9 157 107-293 268-425 (519)
174 PF12146 Hydrolase_4: Putative 98.5 4.7E-07 1E-11 67.7 7.4 58 329-398 1-58 (79)
175 TIGR02658 TTQ_MADH_Hv methylam 98.5 0.00016 3.5E-09 70.4 26.8 208 81-303 78-340 (352)
176 PF05677 DUF818: Chlamydia CHL 98.5 2.6E-06 5.7E-11 79.9 13.6 189 313-515 106-300 (365)
177 PRK13616 lipoprotein LpqB; Pro 98.5 8.2E-06 1.8E-10 85.6 18.7 158 25-247 352-529 (591)
178 TIGR01849 PHB_depoly_PhaZ poly 98.5 4.2E-06 9.2E-11 82.7 14.8 71 500-570 332-406 (406)
179 TIGR03866 PQQ_ABC_repeats PQQ- 98.4 0.00017 3.8E-09 70.0 26.0 181 81-300 54-244 (300)
180 TIGR03502 lipase_Pla1_cef extr 98.4 9.1E-07 2E-11 94.1 10.2 99 348-453 448-575 (792)
181 KOG2551 Phospholipase/carboxyh 98.4 5.4E-06 1.2E-10 72.8 13.0 185 348-569 4-219 (230)
182 PF11339 DUF3141: Protein of u 98.4 1.2E-05 2.5E-10 79.6 16.2 50 500-549 292-348 (581)
183 PF06028 DUF915: Alpha/beta hy 98.4 1.8E-06 4E-11 80.2 10.0 205 348-567 11-252 (255)
184 TIGR03866 PQQ_ABC_repeats PQQ- 98.3 0.00022 4.7E-09 69.3 24.0 182 81-301 96-287 (300)
185 PF02897 Peptidase_S9_N: Proly 98.3 7.9E-05 1.7E-09 76.3 21.0 209 63-297 133-361 (414)
186 COG3545 Predicted esterase of 98.3 6E-05 1.3E-09 63.9 16.1 117 432-567 58-176 (181)
187 PF08662 eIF2A: Eukaryotic tra 98.3 0.00021 4.5E-09 64.4 20.3 146 112-280 9-164 (194)
188 KOG3253 Predicted alpha/beta h 98.2 2.2E-05 4.7E-10 78.4 12.9 167 348-551 175-347 (784)
189 PF10142 PhoPQ_related: PhoPQ- 98.2 0.00024 5.1E-09 69.4 19.7 134 428-569 167-319 (367)
190 PF03096 Ndr: Ndr family; Int 98.2 4.7E-05 1E-09 70.8 13.4 228 323-569 3-278 (283)
191 COG3243 PhaC Poly(3-hydroxyalk 98.1 4.2E-05 9.2E-10 73.9 13.4 165 373-549 129-370 (445)
192 COG4947 Uncharacterized protei 98.1 9.2E-06 2E-10 67.6 6.5 118 419-550 89-216 (227)
193 cd00200 WD40 WD40 domain, foun 98.1 0.0022 4.8E-08 61.0 24.4 203 23-301 10-215 (289)
194 KOG0291 WD40-repeat-containing 98.0 0.0021 4.6E-08 66.0 23.5 217 82-341 374-594 (893)
195 KOG0266 WD40 repeat-containing 98.0 0.0025 5.4E-08 65.9 25.0 183 81-301 226-417 (456)
196 COG3150 Predicted esterase [Ge 98.0 8.4E-05 1.8E-09 62.0 11.1 134 416-568 44-187 (191)
197 cd00200 WD40 WD40 domain, foun 98.0 0.0055 1.2E-07 58.3 26.2 180 81-300 74-256 (289)
198 PF08450 SGL: SMP-30/Gluconola 98.0 0.013 2.9E-07 55.1 28.5 208 81-334 23-242 (246)
199 KOG0279 G protein beta subunit 98.0 0.0022 4.8E-08 58.2 20.1 247 9-298 10-267 (315)
200 KOG1516 Carboxylesterase and r 98.0 1.8E-05 3.9E-10 84.2 8.5 130 332-468 97-232 (545)
201 PF10282 Lactonase: Lactonase, 98.0 0.0078 1.7E-07 59.9 26.2 171 109-296 144-327 (345)
202 PF12048 DUF3530: Protein of u 98.0 0.00096 2.1E-08 64.6 18.9 219 316-570 59-309 (310)
203 KOG2931 Differentiation-relate 97.9 0.0012 2.5E-08 60.8 17.5 230 319-568 22-304 (326)
204 PF00975 Thioesterase: Thioest 97.9 6.6E-05 1.4E-09 70.0 9.9 97 351-466 2-102 (229)
205 KOG0645 WD40 repeat protein [G 97.9 0.0041 9E-08 56.3 20.2 188 24-279 63-261 (312)
206 KOG0271 Notchless-like WD40 re 97.9 0.0025 5.4E-08 60.3 18.9 117 27-204 162-285 (480)
207 KOG0271 Notchless-like WD40 re 97.9 0.00032 7E-09 66.1 13.0 135 81-241 138-276 (480)
208 KOG0318 WD40 repeat stress pro 97.9 0.0075 1.6E-07 59.6 22.7 174 5-242 170-349 (603)
209 PF00151 Lipase: Lipase; Inte 97.9 3E-05 6.5E-10 75.5 6.6 115 347-469 69-188 (331)
210 PRK13616 lipoprotein LpqB; Pro 97.8 0.0013 2.9E-08 69.3 19.0 165 109-298 350-531 (591)
211 PF05705 DUF829: Eukaryotic pr 97.8 0.0011 2.3E-08 62.3 16.3 64 504-567 177-240 (240)
212 PTZ00421 coronin; Provisional 97.8 0.014 3E-07 60.5 25.7 165 106-297 123-294 (493)
213 PF07819 PGAP1: PGAP1-like pro 97.8 0.00014 3E-09 67.0 9.7 102 350-467 5-122 (225)
214 PRK11028 6-phosphogluconolacto 97.8 0.0065 1.4E-07 60.1 22.4 59 215-278 234-292 (330)
215 KOG1407 WD40 repeat protein [F 97.8 0.0045 9.8E-08 55.7 18.2 52 81-145 88-139 (313)
216 COG4814 Uncharacterized protei 97.8 0.00031 6.7E-09 63.0 11.0 210 347-569 44-286 (288)
217 KOG1407 WD40 repeat protein [F 97.8 0.0024 5.2E-08 57.4 16.2 182 23-277 21-207 (313)
218 KOG4840 Predicted hydrolases o 97.7 0.00065 1.4E-08 59.5 12.0 90 372-471 55-147 (299)
219 PF01674 Lipase_2: Lipase (cla 97.7 0.0001 2.2E-09 66.9 6.7 90 350-453 3-95 (219)
220 KOG0279 G protein beta subunit 97.6 0.039 8.5E-07 50.4 22.2 170 105-303 60-232 (315)
221 PF02239 Cytochrom_D1: Cytochr 97.6 0.013 2.7E-07 58.6 21.3 170 107-302 170-356 (369)
222 PF02239 Cytochrom_D1: Cytochr 97.6 0.026 5.5E-07 56.4 23.2 128 81-228 59-191 (369)
223 PF05990 DUF900: Alpha/beta hy 97.6 0.00022 4.7E-09 66.1 7.9 141 348-520 17-168 (233)
224 PTZ00472 serine carboxypeptida 97.6 0.00032 6.9E-09 72.0 9.8 135 329-469 60-217 (462)
225 KOG1446 Histone H3 (Lys4) meth 97.6 0.066 1.4E-06 49.8 28.7 276 17-340 9-303 (311)
226 KOG3975 Uncharacterized conser 97.6 0.003 6.4E-08 56.7 13.9 226 329-567 10-300 (301)
227 COG2706 3-carboxymuconate cycl 97.6 0.0079 1.7E-07 56.9 17.3 115 81-205 216-332 (346)
228 KOG0273 Beta-transducin family 97.5 0.0051 1.1E-07 59.9 16.4 152 25-241 238-389 (524)
229 PTZ00420 coronin; Provisional 97.5 0.12 2.5E-06 54.4 27.7 118 107-242 124-247 (568)
230 KOG2055 WD40 repeat protein [G 97.5 0.0019 4.1E-08 62.6 13.1 207 7-277 272-500 (514)
231 KOG1273 WD40 repeat protein [G 97.5 0.025 5.3E-07 52.5 19.6 233 23-329 66-314 (405)
232 PF05577 Peptidase_S28: Serine 97.5 0.00014 3.1E-09 74.8 6.1 116 349-469 29-149 (434)
233 PF10282 Lactonase: Lactonase, 97.5 0.057 1.2E-06 53.7 24.3 188 81-293 16-222 (345)
234 KOG0266 WD40 repeat-containing 97.5 0.048 1E-06 56.4 24.5 164 106-300 201-371 (456)
235 KOG2139 WD40 repeat protein [G 97.5 0.0049 1.1E-07 58.0 14.9 153 107-282 194-368 (445)
236 KOG0272 U4/U6 small nuclear ri 97.5 0.0021 4.6E-08 61.5 12.6 184 23-276 262-447 (459)
237 KOG0318 WD40 repeat stress pro 97.5 0.067 1.4E-06 53.2 22.9 97 4-142 41-137 (603)
238 PLN02733 phosphatidylcholine-s 97.5 0.00025 5.4E-09 71.6 6.8 88 371-467 109-200 (440)
239 PTZ00420 coronin; Provisional 97.5 0.016 3.4E-07 60.7 20.1 138 81-240 149-292 (568)
240 COG2706 3-carboxymuconate cycl 97.4 0.12 2.6E-06 49.2 29.3 219 23-292 40-273 (346)
241 KOG0973 Histone transcription 97.4 0.0053 1.1E-07 65.8 16.1 109 106-231 127-242 (942)
242 PRK10115 protease 2; Provision 97.4 0.012 2.5E-07 64.0 19.3 118 109-242 127-256 (686)
243 KOG2055 WD40 repeat protein [G 97.4 0.013 2.8E-07 57.0 16.6 182 81-295 281-469 (514)
244 KOG2139 WD40 repeat protein [G 97.3 0.021 4.6E-07 54.0 17.0 108 172-292 202-310 (445)
245 KOG1274 WD40 repeat protein [G 97.3 0.05 1.1E-06 57.7 21.4 153 110-293 98-262 (933)
246 KOG2314 Translation initiation 97.3 0.0073 1.6E-07 60.1 14.6 185 24-229 348-558 (698)
247 KOG0315 G-protein beta subunit 97.2 0.1 2.3E-06 46.9 19.5 176 81-292 62-244 (311)
248 PRK11028 6-phosphogluconolacto 97.2 0.25 5.4E-06 48.8 27.6 185 81-293 13-205 (330)
249 PF07676 PD40: WD40-like Beta 97.2 0.00068 1.5E-08 42.9 4.6 32 107-138 7-39 (39)
250 PF08450 SGL: SMP-30/Gluconola 97.2 0.023 5E-07 53.5 17.0 149 113-293 4-164 (246)
251 KOG1446 Histone H3 (Lys4) meth 97.2 0.026 5.7E-07 52.3 15.5 125 81-228 163-293 (311)
252 COG3386 Gluconolactonase [Carb 97.2 0.015 3.2E-07 56.1 14.8 130 80-231 143-278 (307)
253 COG3386 Gluconolactonase [Carb 97.1 0.12 2.6E-06 49.9 20.7 156 24-242 26-192 (307)
254 PF07082 DUF1350: Protein of u 97.1 0.012 2.6E-07 53.5 12.9 185 334-549 8-204 (250)
255 PF07433 DUF1513: Protein of u 97.1 0.28 6E-06 46.6 22.4 191 81-298 29-252 (305)
256 KOG0291 WD40-repeat-containing 97.1 0.16 3.5E-06 52.9 21.7 63 23-130 15-77 (893)
257 KOG2096 WD40 repeat protein [G 97.1 0.051 1.1E-06 50.6 16.4 157 110-277 134-296 (420)
258 PF00450 Peptidase_S10: Serine 97.1 0.0036 7.7E-08 64.2 10.4 142 323-469 17-182 (415)
259 KOG0293 WD40 repeat-containing 97.0 0.019 4.1E-07 55.1 13.9 157 108-296 224-387 (519)
260 KOG0315 G-protein beta subunit 97.0 0.21 4.5E-06 45.1 19.4 179 82-300 107-295 (311)
261 KOG0772 Uncharacterized conser 97.0 0.048 1E-06 54.0 16.8 170 112-297 272-449 (641)
262 PF06433 Me-amine-dh_H: Methyl 96.9 0.23 5.1E-06 47.7 20.2 118 175-303 195-330 (342)
263 KOG4389 Acetylcholinesterase/B 96.9 0.0012 2.6E-08 64.9 4.9 127 332-469 121-256 (601)
264 KOG2314 Translation initiation 96.9 0.14 3E-06 51.4 18.8 234 22-280 305-558 (698)
265 TIGR02658 TTQ_MADH_Hv methylam 96.9 0.28 6.1E-06 48.2 21.1 114 113-242 198-329 (352)
266 PTZ00421 coronin; Provisional 96.9 0.11 2.4E-06 53.9 19.2 54 81-146 149-202 (493)
267 PF10647 Gmad1: Lipoprotein Lp 96.9 0.36 7.8E-06 45.5 21.1 173 109-301 24-204 (253)
268 TIGR02171 Fb_sc_TIGR02171 Fibr 96.8 0.0055 1.2E-07 65.6 9.6 112 81-208 330-455 (912)
269 PF07676 PD40: WD40-like Beta 96.8 0.0022 4.8E-08 40.5 4.1 38 201-239 2-39 (39)
270 KOG1551 Uncharacterized conser 96.8 0.029 6.3E-07 50.9 12.3 211 332-569 102-365 (371)
271 COG1506 DAP2 Dipeptidyl aminop 96.8 0.055 1.2E-06 58.3 17.0 209 23-280 13-236 (620)
272 KOG3967 Uncharacterized conser 96.8 0.014 2.9E-07 51.1 9.6 102 347-456 99-213 (297)
273 KOG1273 WD40 repeat protein [G 96.7 0.13 2.8E-06 48.0 16.2 168 81-281 46-218 (405)
274 COG4782 Uncharacterized protei 96.7 0.0074 1.6E-07 57.7 8.4 109 348-470 115-236 (377)
275 PF10647 Gmad1: Lipoprotein Lp 96.7 0.18 4E-06 47.4 17.7 92 110-207 113-208 (253)
276 KOG0305 Anaphase promoting com 96.6 0.5 1.1E-05 48.1 20.7 153 105-280 298-452 (484)
277 COG3319 Thioesterase domains o 96.6 0.011 2.3E-07 55.1 8.5 100 350-469 1-104 (257)
278 KOG2565 Predicted hydrolases o 96.6 0.008 1.7E-07 57.3 7.5 115 328-460 132-256 (469)
279 PF08386 Abhydrolase_4: TAP-li 96.6 0.0073 1.6E-07 47.9 6.3 59 505-568 34-92 (103)
280 PF11187 DUF2974: Protein of u 96.5 0.0079 1.7E-07 55.1 6.7 74 392-466 44-121 (224)
281 KOG1445 Tumor-specific antigen 96.4 0.019 4.1E-07 58.2 9.3 138 80-240 700-843 (1012)
282 PF06977 SdiA-regulated: SdiA- 96.4 0.84 1.8E-05 42.5 21.5 199 25-290 24-247 (248)
283 KOG2394 WD40 protein DMR-N9 [G 96.4 0.0043 9.3E-08 61.4 4.6 70 11-126 281-350 (636)
284 KOG0973 Histone transcription 96.3 0.092 2E-06 56.8 14.6 160 106-291 67-251 (942)
285 KOG0263 Transcription initiati 96.3 0.16 3.4E-06 53.1 15.2 163 105-299 448-613 (707)
286 KOG2183 Prolylcarboxypeptidase 96.2 0.0083 1.8E-07 58.0 5.3 116 349-468 81-203 (492)
287 KOG2182 Hydrolytic enzymes of 96.1 0.02 4.4E-07 57.0 7.7 118 348-468 85-207 (514)
288 KOG1445 Tumor-specific antigen 96.0 0.039 8.5E-07 56.0 9.2 86 24-151 722-807 (1012)
289 PF02333 Phytase: Phytase; In 96.0 1.4 3E-05 43.6 19.7 148 81-245 79-239 (381)
290 PF05057 DUF676: Putative seri 96.0 0.012 2.6E-07 54.0 5.4 21 432-452 77-97 (217)
291 PLN00181 protein SPA1-RELATED; 96.0 2 4.4E-05 48.1 23.9 52 81-145 599-651 (793)
292 COG1075 LipA Predicted acetylt 95.7 0.026 5.7E-07 55.5 6.9 101 348-468 59-164 (336)
293 KOG4497 Uncharacterized conser 95.7 0.12 2.6E-06 48.5 10.4 36 107-143 90-125 (447)
294 KOG2315 Predicted translation 95.7 0.75 1.6E-05 46.4 16.4 123 80-229 251-375 (566)
295 KOG4388 Hormone-sensitive lipa 95.6 0.017 3.6E-07 58.2 5.1 91 348-452 395-488 (880)
296 KOG2096 WD40 repeat protein [G 95.6 1 2.2E-05 42.3 16.0 160 80-276 209-390 (420)
297 PLN02919 haloacid dehalogenase 95.6 5.9 0.00013 45.6 25.7 85 112-201 686-775 (1057)
298 KOG4328 WD40 protein [Function 95.6 2.7 5.9E-05 41.5 20.2 161 106-292 232-398 (498)
299 PF07519 Tannase: Tannase and 95.5 0.088 1.9E-06 54.3 10.2 131 330-470 15-152 (474)
300 KOG0265 U5 snRNP-specific prot 95.5 1.8 3.8E-05 40.5 17.1 123 81-227 70-193 (338)
301 KOG0771 Prolactin regulatory e 95.5 0.72 1.6E-05 44.8 15.2 146 108-276 186-341 (398)
302 KOG0282 mRNA splicing factor [ 95.5 0.13 2.9E-06 50.6 10.4 55 81-147 281-335 (503)
303 PLN03016 sinapoylglucose-malat 95.4 0.054 1.2E-06 55.1 8.0 62 506-569 348-430 (433)
304 PF04762 IKI3: IKI3 family; I 95.4 1.9 4.1E-05 48.7 20.4 109 107-228 208-324 (928)
305 COG3946 VirJ Type IV secretory 95.4 0.066 1.4E-06 51.9 7.8 168 368-566 272-445 (456)
306 PLN02209 serine carboxypeptida 95.3 0.083 1.8E-06 53.8 9.1 62 506-569 352-434 (437)
307 PRK10252 entF enterobactin syn 95.3 0.035 7.5E-07 66.0 7.4 98 350-466 1069-1169(1296)
308 COG1770 PtrB Protease II [Amin 95.3 4.7 0.0001 42.4 22.1 162 19-231 169-338 (682)
309 TIGR02171 Fb_sc_TIGR02171 Fibr 95.3 0.12 2.6E-06 55.9 10.1 74 177-257 320-395 (912)
310 PF04762 IKI3: IKI3 family; I 95.2 1.7 3.7E-05 49.0 19.5 101 172-280 216-325 (928)
311 COG5354 Uncharacterized protei 95.2 3.9 8.5E-05 41.1 21.0 226 81-341 109-349 (561)
312 KOG0771 Prolactin regulatory e 95.2 0.53 1.2E-05 45.7 13.2 54 24-120 188-241 (398)
313 PF02450 LCAT: Lecithin:choles 95.2 0.057 1.2E-06 54.4 7.3 81 372-467 67-159 (389)
314 KOG0273 Beta-transducin family 95.1 4 8.6E-05 40.6 20.8 176 74-280 333-514 (524)
315 KOG3724 Negative regulator of 95.1 0.018 3.9E-07 60.2 3.5 38 416-453 158-202 (973)
316 COG5354 Uncharacterized protei 95.0 1.3 2.8E-05 44.3 15.4 180 80-292 152-347 (561)
317 PLN00181 protein SPA1-RELATED; 94.9 8.1 0.00018 43.4 25.7 176 81-292 556-737 (793)
318 KOG0272 U4/U6 small nuclear ri 94.9 0.59 1.3E-05 45.5 12.7 124 83-229 328-451 (459)
319 KOG0286 G-protein beta subunit 94.8 3.4 7.4E-05 38.5 22.6 239 22-335 55-300 (343)
320 KOG1282 Serine carboxypeptidas 94.8 0.26 5.6E-06 50.0 10.5 144 322-469 49-214 (454)
321 KOG0275 Conserved WD40 repeat- 94.7 0.81 1.8E-05 42.8 12.5 201 108-338 263-467 (508)
322 cd00741 Lipase Lipase. Lipase 94.6 0.067 1.4E-06 46.1 5.4 37 417-455 14-50 (153)
323 PLN02919 haloacid dehalogenase 94.6 11 0.00024 43.5 25.2 121 112-242 627-769 (1057)
324 KOG0296 Angio-associated migra 94.5 1.4 3.1E-05 42.1 13.9 119 82-228 88-210 (399)
325 KOG0275 Conserved WD40 repeat- 94.5 0.19 4.2E-06 46.8 8.0 119 105-242 345-466 (508)
326 KOG0284 Polyadenylation factor 94.4 0.39 8.4E-06 46.5 10.1 99 178-296 195-297 (464)
327 KOG0286 G-protein beta subunit 94.4 4.3 9.4E-05 37.9 20.5 166 105-300 142-310 (343)
328 PF01764 Lipase_3: Lipase (cla 94.4 0.079 1.7E-06 44.8 5.2 53 414-468 47-106 (140)
329 KOG0303 Actin-binding protein 94.4 3.7 8E-05 39.9 16.4 105 27-147 86-208 (472)
330 KOG0263 Transcription initiati 94.3 1.4 3.1E-05 46.3 14.6 158 82-276 475-636 (707)
331 KOG1007 WD repeat protein TSSC 94.3 2.1 4.6E-05 39.7 14.0 154 23-231 124-281 (370)
332 KOG2315 Predicted translation 94.2 6.2 0.00013 40.2 18.3 141 112-280 221-375 (566)
333 KOG4497 Uncharacterized conser 94.2 0.28 6.2E-06 46.0 8.5 73 14-130 81-155 (447)
334 KOG1539 WD repeat protein [Gen 94.1 0.25 5.5E-06 52.1 9.0 63 23-131 577-639 (910)
335 KOG0305 Anaphase promoting com 94.1 3.8 8.2E-05 41.9 17.1 184 80-299 197-382 (484)
336 TIGR03712 acc_sec_asp2 accesso 93.9 4.7 0.0001 40.8 16.8 115 327-470 273-392 (511)
337 COG4287 PqaA PhoPQ-activated p 93.8 0.1 2.3E-06 49.8 5.1 118 430-550 231-371 (507)
338 KOG2521 Uncharacterized conser 93.6 1.5 3.4E-05 42.7 12.8 65 506-570 226-290 (350)
339 KOG0772 Uncharacterized conser 93.5 2.7 6E-05 42.2 14.2 195 81-296 190-397 (641)
340 PF15492 Nbas_N: Neuroblastoma 93.4 6.7 0.00015 36.6 23.1 36 110-149 45-80 (282)
341 KOG0290 Conserved WD40 repeat- 93.4 5.8 0.00013 37.0 15.2 141 79-232 74-220 (364)
342 KOG1274 WD40 repeat protein [G 93.4 2.1 4.6E-05 46.0 14.1 55 81-147 119-173 (933)
343 KOG2106 Uncharacterized conser 93.3 2.4 5.1E-05 42.5 13.4 61 25-127 450-510 (626)
344 KOG2919 Guanine nucleotide-bin 93.2 8 0.00017 36.7 17.0 76 209-294 252-328 (406)
345 KOG0278 Serine/threonine kinas 93.1 2.4 5.1E-05 38.6 12.0 131 81-242 166-298 (334)
346 PF06977 SdiA-regulated: SdiA- 93.1 3 6.6E-05 38.9 13.5 196 107-329 20-233 (248)
347 KOG1523 Actin-related protein 92.9 5.5 0.00012 37.7 14.5 40 105-147 52-91 (361)
348 KOG4283 Transcription-coupled 92.9 8.1 0.00018 36.2 15.9 60 80-151 124-185 (397)
349 PF06850 PHB_depo_C: PHB de-po 92.9 0.17 3.7E-06 44.3 4.6 70 501-570 129-202 (202)
350 TIGR02604 Piru_Ver_Nterm putat 92.8 12 0.00025 37.6 19.0 39 188-228 164-202 (367)
351 PF07519 Tannase: Tannase and 92.8 0.2 4.4E-06 51.7 5.9 69 501-569 349-426 (474)
352 PRK02888 nitrous-oxide reducta 92.7 12 0.00026 39.6 18.3 18 26-43 238-255 (635)
353 KOG1920 IkappaB kinase complex 92.7 4.4 9.5E-05 45.3 15.6 174 107-292 108-321 (1265)
354 cd00519 Lipase_3 Lipase (class 92.7 0.18 4E-06 46.8 5.0 52 415-468 112-168 (229)
355 PF11288 DUF3089: Protein of u 92.7 0.19 4E-06 45.0 4.7 72 382-454 44-116 (207)
356 PLN02454 triacylglycerol lipas 92.6 0.32 7E-06 48.4 6.7 55 415-469 210-272 (414)
357 PLN02633 palmitoyl protein thi 92.6 0.61 1.3E-05 44.3 8.2 103 347-466 24-129 (314)
358 KOG0643 Translation initiation 92.5 8.9 0.00019 35.4 21.1 110 10-142 18-128 (327)
359 KOG2110 Uncharacterized conser 92.2 6.6 0.00014 37.9 14.4 138 80-242 106-249 (391)
360 KOG0306 WD40-repeat-containing 92.2 11 0.00024 40.0 17.0 149 108-280 373-529 (888)
361 PLN02606 palmitoyl-protein thi 91.9 0.99 2.1E-05 42.9 8.7 103 347-466 25-130 (306)
362 KOG0639 Transducin-like enhanc 91.9 2.2 4.7E-05 42.7 11.2 157 82-276 533-691 (705)
363 PF02089 Palm_thioest: Palmito 91.7 1.1 2.4E-05 42.2 8.7 108 347-467 4-115 (279)
364 KOG0319 WD40-repeat-containing 91.6 14 0.00031 39.1 17.0 203 22-301 19-230 (775)
365 PF07433 DUF1513: Protein of u 91.5 13 0.00029 35.5 16.8 166 177-360 18-200 (305)
366 KOG0296 Angio-associated migra 91.3 15 0.00032 35.5 21.6 122 3-147 87-225 (399)
367 PF04083 Abhydro_lipase: Parti 91.2 0.87 1.9E-05 32.1 5.8 45 318-362 11-56 (63)
368 PLN02408 phospholipase A1 91.1 0.31 6.8E-06 47.7 4.8 39 415-453 182-220 (365)
369 COG3391 Uncharacterized conser 90.9 19 0.00042 36.2 23.1 164 110-299 117-289 (381)
370 PLN02571 triacylglycerol lipas 90.9 0.33 7.2E-06 48.3 4.7 39 415-453 208-246 (413)
371 KOG0641 WD40 repeat protein [G 90.8 12 0.00025 33.5 21.4 172 108-303 89-271 (350)
372 KOG2394 WD40 protein DMR-N9 [G 90.5 4.2 9.1E-05 41.2 11.7 130 109-278 220-351 (636)
373 PF03283 PAE: Pectinacetyleste 90.2 0.3 6.6E-06 48.4 3.8 102 415-517 138-260 (361)
374 KOG2110 Uncharacterized conser 90.0 7.3 0.00016 37.6 12.4 94 81-195 154-249 (391)
375 KOG2048 WD40 repeat protein [G 89.9 1.5 3.4E-05 45.3 8.4 63 80-150 451-513 (691)
376 KOG2369 Lecithin:cholesterol a 89.8 0.29 6.2E-06 48.9 3.2 74 372-456 126-205 (473)
377 PLN02517 phosphatidylcholine-s 89.8 0.3 6.5E-06 50.5 3.4 73 373-452 159-232 (642)
378 PLN02324 triacylglycerol lipas 89.8 0.48 1E-05 47.1 4.7 37 416-452 198-234 (415)
379 COG2939 Carboxypeptidase C (ca 89.6 1.2 2.5E-05 45.2 7.4 115 332-452 87-217 (498)
380 COG4247 Phy 3-phytase (myo-ino 89.6 17 0.00036 33.5 17.1 66 80-152 77-144 (364)
381 PF06433 Me-amine-dh_H: Methyl 89.5 22 0.00047 34.7 15.7 115 112-242 187-319 (342)
382 KOG0645 WD40 repeat protein [G 89.5 18 0.00038 33.6 20.4 147 108-276 61-212 (312)
383 KOG1524 WD40 repeat-containing 89.4 13 0.00028 37.9 14.0 23 106-128 143-165 (737)
384 PLN00413 triacylglycerol lipas 89.3 0.53 1.2E-05 47.5 4.7 35 416-452 269-303 (479)
385 PF06259 Abhydrolase_8: Alpha/ 89.2 0.93 2E-05 39.7 5.7 50 416-466 93-143 (177)
386 PLN02802 triacylglycerol lipas 88.9 0.58 1.3E-05 47.6 4.7 39 415-453 312-350 (509)
387 KOG0643 Translation initiation 88.9 20 0.00042 33.3 21.1 131 190-327 76-209 (327)
388 KOG0283 WD40 repeat-containing 88.8 3.6 7.7E-05 43.8 10.4 126 82-227 434-565 (712)
389 PLN02162 triacylglycerol lipas 88.4 0.64 1.4E-05 46.8 4.6 35 416-452 263-297 (475)
390 KOG0319 WD40-repeat-containing 88.3 23 0.00051 37.5 15.5 112 110-238 235-351 (775)
391 PF09910 DUF2139: Uncharacteri 88.3 11 0.00023 35.6 11.9 106 80-200 78-185 (339)
392 COG3490 Uncharacterized protei 88.3 22 0.00048 33.4 13.7 159 179-356 83-259 (366)
393 KOG0289 mRNA splicing factor [ 88.2 29 0.00063 34.5 18.3 77 210-301 350-427 (506)
394 smart00824 PKS_TE Thioesterase 88.1 2 4.2E-05 38.8 7.5 80 373-465 16-99 (212)
395 KOG0288 WD40 repeat protein Ti 87.8 8.7 0.00019 37.7 11.4 120 82-228 324-451 (459)
396 PLN02934 triacylglycerol lipas 87.7 0.71 1.5E-05 47.0 4.4 35 416-452 306-340 (515)
397 PF01083 Cutinase: Cutinase; 87.5 1.4 3E-05 39.0 5.8 75 383-465 39-119 (179)
398 PLN02761 lipase class 3 family 87.3 0.85 1.8E-05 46.6 4.7 38 415-452 272-313 (527)
399 PLN02753 triacylglycerol lipas 87.2 0.85 1.8E-05 46.6 4.7 38 415-452 291-331 (531)
400 KOG0310 Conserved WD40 repeat- 87.2 35 0.00077 34.3 18.5 163 83-281 136-301 (487)
401 KOG0650 WD40 repeat nucleolar 86.9 32 0.0007 35.7 15.2 50 82-144 424-474 (733)
402 KOG0268 Sof1-like rRNA process 86.6 10 0.00022 36.6 11.0 159 81-280 168-335 (433)
403 KOG0288 WD40 repeat protein Ti 86.6 8.6 0.00019 37.7 10.6 63 82-152 365-427 (459)
404 KOG0264 Nucleosome remodeling 86.3 14 0.00031 36.5 12.1 138 81-241 251-404 (422)
405 PLN02310 triacylglycerol lipas 86.1 1 2.3E-05 44.8 4.6 38 416-453 190-229 (405)
406 KOG2106 Uncharacterized conser 86.0 10 0.00023 38.2 11.1 90 81-192 429-518 (626)
407 KOG2048 WD40 repeat protein [G 85.8 40 0.00086 35.5 15.4 57 82-149 49-105 (691)
408 COG4257 Vgb Streptogramin lyas 85.7 31 0.00068 32.3 14.0 151 113-295 66-220 (353)
409 KOG2541 Palmitoyl protein thio 85.3 5.4 0.00012 37.0 8.2 101 348-465 23-125 (296)
410 KOG1538 Uncharacterized conser 85.3 54 0.0012 34.6 17.3 18 24-41 14-31 (1081)
411 KOG0647 mRNA export protein (c 85.3 6.6 0.00014 36.9 8.8 44 107-154 71-114 (347)
412 KOG0290 Conserved WD40 repeat- 84.9 35 0.00076 32.1 15.0 172 107-306 43-240 (364)
413 PF05787 DUF839: Bacterial pro 84.5 33 0.00072 36.1 14.9 43 183-227 476-520 (524)
414 PLN02719 triacylglycerol lipas 84.2 1.5 3.2E-05 44.8 4.7 38 415-452 277-317 (518)
415 PRK13614 lipoprotein LpqB; Pro 84.1 63 0.0014 34.4 17.5 122 110-242 384-517 (573)
416 PLN03037 lipase class 3 family 84.0 1.1 2.3E-05 45.8 3.6 37 417-453 300-338 (525)
417 PF15525 DUF4652: Domain of un 84.0 12 0.00026 32.6 9.3 69 78-151 86-157 (200)
418 PRK13613 lipoprotein LpqB; Pro 83.5 69 0.0015 34.4 17.4 121 110-247 410-541 (599)
419 KOG4378 Nuclear protein COP1 [ 83.3 56 0.0012 33.2 16.8 162 109-296 122-283 (673)
420 COG3391 Uncharacterized conser 83.2 54 0.0012 33.0 16.4 138 81-242 141-282 (381)
421 COG3204 Uncharacterized protei 82.8 44 0.00096 31.7 20.1 76 25-145 88-163 (316)
422 KOG0295 WD40 repeat-containing 82.4 50 0.0011 32.1 17.9 167 106-302 191-373 (406)
423 KOG0306 WD40-repeat-containing 82.3 77 0.0017 34.1 16.8 159 107-281 453-613 (888)
424 KOG0310 Conserved WD40 repeat- 82.2 42 0.0009 33.9 13.4 161 107-297 67-229 (487)
425 KOG1009 Chromatin assembly com 81.0 1.7 3.6E-05 42.3 3.5 56 27-126 128-183 (434)
426 KOG0283 WD40 repeat-containing 80.5 28 0.00061 37.4 12.4 93 172-277 376-469 (712)
427 KOG0307 Vesicle coat complex C 80.3 9.2 0.0002 42.5 9.0 98 186-294 137-241 (1049)
428 KOG4569 Predicted lipase [Lipi 80.2 2.4 5.3E-05 41.7 4.5 37 415-453 155-191 (336)
429 PF13360 PQQ_2: PQQ-like domai 80.2 48 0.001 30.4 14.4 141 81-242 87-229 (238)
430 PRK02888 nitrous-oxide reducta 80.1 61 0.0013 34.6 14.6 37 256-295 317-353 (635)
431 COG3204 Uncharacterized protei 79.7 43 0.00093 31.8 11.9 117 108-242 85-211 (316)
432 KOG1063 RNA polymerase II elon 79.6 20 0.00043 37.8 10.7 73 26-139 529-601 (764)
433 KOG1920 IkappaB kinase complex 79.6 67 0.0014 36.6 15.1 21 24-44 111-131 (1265)
434 KOG0295 WD40 repeat-containing 79.5 64 0.0014 31.4 14.3 141 81-241 216-364 (406)
435 PF03088 Str_synth: Strictosid 78.3 13 0.00029 28.3 7.0 52 79-142 36-87 (89)
436 TIGR02604 Piru_Ver_Nterm putat 77.7 40 0.00086 33.8 12.5 42 109-150 124-180 (367)
437 KOG1539 WD repeat protein [Gen 76.7 7.5 0.00016 41.6 6.9 60 76-147 552-611 (910)
438 KOG0277 Peroxisomal targeting 76.6 64 0.0014 29.9 15.4 178 81-292 39-220 (311)
439 KOG0289 mRNA splicing factor [ 75.5 92 0.002 31.2 22.1 157 107-291 302-460 (506)
440 PF09994 DUF2235: Uncharacteri 75.2 13 0.00028 35.6 7.8 40 413-453 73-112 (277)
441 KOG0284 Polyadenylation factor 75.0 33 0.0007 33.9 10.1 101 109-228 181-284 (464)
442 PLN02847 triacylglycerol lipas 74.7 4.2 9.1E-05 42.4 4.4 21 432-452 250-270 (633)
443 KOG1283 Serine carboxypeptidas 74.4 8.3 0.00018 36.7 5.9 134 327-468 11-166 (414)
444 KOG0647 mRNA export protein (c 73.9 83 0.0018 29.9 18.0 28 265-292 299-336 (347)
445 KOG0646 WD40 repeat protein [G 73.7 80 0.0017 31.8 12.5 42 81-130 104-145 (476)
446 PF13449 Phytase-like: Esteras 73.6 41 0.0009 33.0 11.1 65 80-144 184-253 (326)
447 KOG4540 Putative lipase essent 73.5 4.5 9.7E-05 37.6 3.9 39 414-454 259-297 (425)
448 COG5153 CVT17 Putative lipase 73.5 4.5 9.7E-05 37.6 3.9 39 414-454 259-297 (425)
449 PF04053 Coatomer_WDAD: Coatom 73.2 54 0.0012 33.7 12.0 38 81-129 127-165 (443)
450 KOG0650 WD40 repeat nucleolar 73.0 1.3E+02 0.0028 31.6 15.9 108 107-230 520-629 (733)
451 KOG0277 Peroxisomal targeting 72.5 82 0.0018 29.2 18.7 240 113-392 13-265 (311)
452 KOG4283 Transcription-coupled 72.2 90 0.002 29.6 13.3 88 27-146 193-280 (397)
453 KOG1009 Chromatin assembly com 71.6 53 0.0012 32.4 10.6 159 105-275 62-246 (434)
454 PLN02213 sinapoylglucose-malat 70.5 10 0.00022 37.1 6.0 62 506-569 234-316 (319)
455 KOG0641 WD40 repeat protein [G 69.8 86 0.0019 28.3 19.3 64 215-292 238-302 (350)
456 KOG1408 WD40 repeat protein [F 69.4 1.5E+02 0.0032 32.0 13.8 50 188-242 618-670 (1080)
457 PF13449 Phytase-like: Esteras 69.1 1.2E+02 0.0026 29.8 18.6 185 109-294 20-252 (326)
458 PF08553 VID27: VID27 cytoplas 69.0 45 0.00097 36.8 10.8 128 80-228 504-638 (794)
459 KOG4499 Ca2+-binding protein R 68.5 97 0.0021 28.4 14.3 112 112-230 161-276 (310)
460 PF15492 Nbas_N: Neuroblastoma 68.4 9.8 0.00021 35.5 4.9 33 259-295 229-261 (282)
461 PF08237 PE-PPE: PE-PPE domain 68.2 10 0.00022 34.9 5.0 23 431-453 46-68 (225)
462 KOG1520 Predicted alkaloid syn 68.0 82 0.0018 31.2 11.2 87 188-282 199-287 (376)
463 KOG0639 Transducin-like enhanc 67.7 73 0.0016 32.5 10.9 160 80-278 487-652 (705)
464 TIGR03606 non_repeat_PQQ dehyd 67.7 54 0.0012 33.7 10.6 33 113-149 34-66 (454)
465 KOG2041 WD40 repeat protein [G 66.9 53 0.0011 35.0 10.1 105 110-229 158-279 (1189)
466 KOG0640 mRNA cleavage stimulat 66.6 1.2E+02 0.0027 28.9 13.8 117 107-241 215-335 (430)
467 PF09910 DUF2139: Uncharacteri 66.5 80 0.0017 30.1 10.3 101 186-297 76-185 (339)
468 PF03022 MRJP: Major royal jel 64.7 1.4E+02 0.003 28.8 14.5 67 80-151 34-105 (287)
469 PF11768 DUF3312: Protein of u 64.4 34 0.00073 35.5 8.3 52 81-146 282-333 (545)
470 PF11768 DUF3312: Protein of u 64.2 1.9E+02 0.0041 30.3 15.9 66 73-147 229-294 (545)
471 PF13360 PQQ_2: PQQ-like domai 64.1 1.2E+02 0.0025 27.8 20.7 176 81-298 47-235 (238)
472 PTZ00472 serine carboxypeptida 64.0 13 0.00028 38.6 5.5 63 506-569 365-458 (462)
473 KOG1963 WD40 repeat protein [G 63.7 48 0.001 36.0 9.4 53 81-146 274-326 (792)
474 KOG2395 Protein involved in va 63.3 40 0.00088 34.6 8.4 131 80-228 356-491 (644)
475 PF07995 GSDH: Glucose / Sorbo 63.1 1.6E+02 0.0034 29.0 17.0 125 107-241 47-212 (331)
476 COG3673 Uncharacterized conser 63.0 45 0.00097 32.0 8.1 71 382-453 63-142 (423)
477 PLN02213 sinapoylglucose-malat 62.7 9.3 0.0002 37.4 4.0 84 385-470 3-98 (319)
478 cd00216 PQQ_DH Dehydrogenases 62.6 2E+02 0.0044 30.1 15.2 15 81-95 312-326 (488)
479 PLN03016 sinapoylglucose-malat 62.3 16 0.00035 37.4 5.7 136 328-470 48-212 (433)
480 KOG1063 RNA polymerase II elon 61.6 1.6E+02 0.0035 31.4 12.4 113 106-229 265-382 (764)
481 PF12566 DUF3748: Protein of u 61.6 6.6 0.00014 30.9 2.1 15 28-42 73-87 (122)
482 PF12894 Apc4_WD40: Anaphase-p 60.4 28 0.0006 22.8 4.6 28 110-141 13-40 (47)
483 PF05694 SBP56: 56kDa selenium 60.3 2E+02 0.0044 29.3 14.1 139 80-229 222-394 (461)
484 PRK13614 lipoprotein LpqB; Pro 60.2 2.4E+02 0.0052 30.1 21.0 160 110-293 344-518 (573)
485 PLN02209 serine carboxypeptida 60.2 19 0.0004 37.0 5.8 143 322-470 44-214 (437)
486 PF05096 Glu_cyclase_2: Glutam 59.8 1.6E+02 0.0034 27.8 16.3 130 78-242 66-202 (264)
487 KOG4640 Anaphase-promoting com 59.1 37 0.00079 35.6 7.4 30 112-145 66-95 (665)
488 PF07995 GSDH: Glucose / Sorbo 58.8 67 0.0015 31.6 9.3 33 113-151 6-39 (331)
489 KOG0640 mRNA cleavage stimulat 58.7 1.7E+02 0.0037 28.0 11.1 57 82-147 240-296 (430)
490 PRK13615 lipoprotein LpqB; Pro 58.6 2.5E+02 0.0055 29.9 18.5 120 110-247 374-504 (557)
491 KOG0294 WD40 repeat-containing 57.9 1.8E+02 0.0039 27.9 20.1 24 214-241 174-197 (362)
492 PRK13613 lipoprotein LpqB; Pro 57.8 2.7E+02 0.0059 30.0 19.1 167 110-296 364-541 (599)
493 PF12657 TFIIIC_delta: Transcr 57.4 74 0.0016 27.8 8.5 16 25-41 7-22 (173)
494 KOG0313 Microtubule binding pr 57.2 2E+02 0.0044 28.3 15.0 102 81-205 282-387 (423)
495 PF06441 EHN: Epoxide hydrolas 56.3 26 0.00057 28.1 4.9 40 316-361 65-104 (112)
496 KOG0299 U3 snoRNP-associated p 56.2 2.3E+02 0.005 28.7 16.2 37 109-149 203-239 (479)
497 PF02333 Phytase: Phytase; In 55.6 2.3E+02 0.005 28.4 14.4 156 121-293 68-237 (381)
498 KOG2919 Guanine nucleotide-bin 55.0 26 0.00056 33.5 5.2 34 107-142 48-81 (406)
499 KOG0270 WD40 repeat-containing 54.5 2.4E+02 0.0053 28.4 15.8 43 80-130 266-308 (463)
500 KOG0307 Vesicle coat complex C 53.0 54 0.0012 36.8 7.9 138 81-241 185-327 (1049)
No 1
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.8e-69 Score=517.86 Aligned_cols=553 Identities=41% Similarity=0.651 Sum_probs=465.0
Q ss_pred eeeecccceeeeeccCCCceEEECCCC----CeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 8 LQTHGLAEYIAQEEMDRKTGYWWSLDS----KFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 8 ~~~~g~~~~~~~~~~~~~~~~~wSPDg----~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
.+.+|+|.||-+||+++..++||||-+ .+|+|.-.|+.+++.+..+..... .++.+..+||+.|++|+++.|.
T Consensus 250 ~~saGVasyv~QEEfdR~~GyWW~p~s~~~~~rIlYeeVdesev~V~h~~s~~~~---~~~~d~~rYPrtGt~Nak~~Lk 326 (867)
T KOG2281|consen 250 AISAGVASYVVQEEFDRFEGYWWSPPSGLKILRILYEEVDESEVEVIHVPSPVLG---DRRVDSYRYPRTGTKNAKSTLK 326 (867)
T ss_pred hhhcCcchHHHHHHHHhhcceeecCCCCCceEEEEeeecChhheEEEeccCcccC---CCccccccCCcCCCCCceeeEE
Confidence 467899999999999999999999743 478887777777766555444333 2788899999999999999999
Q ss_pred EEECCC---CceEEEecc---CCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCce----------
Q 008274 84 VVSAAG---GPVSWMDLQ---CGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQR---------- 146 (571)
Q Consensus 84 ~~dl~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~---------- 146 (571)
++.+.+ |+...+.+. ++...++..-.|+..+.|.|||+ ..+...+|.|...+|.+++.+....
T Consensus 327 mv~~~~~~~gk~~~v~~kdlv~~~~~~f~~~EYI~Ragwtpdgkyvwvq~LdR~Q~~l~iilip~~~f~~~~dn~~~~~~ 406 (867)
T KOG2281|consen 327 MVEFENDAEGKIYDVPLKDLVQPFHCLFEDVEYIARAGWTPDGKYVWVQVLDRSQQRLQIILIPPTLFIPKEDNLQLRTD 406 (867)
T ss_pred EEEEeeccccceeccchhhcccccccccccceeeeeccccCCCcEEEEEEecCCcceeEEEEECHHHcCCccccHhhhhh
Confidence 888876 544433222 11124455558999999999999 5678899999999999999887654
Q ss_pred -----------EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCC------------------
Q 008274 147 -----------KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDING------------------ 197 (571)
Q Consensus 147 -----------~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~------------------ 197 (571)
..|.+++.+.|++.+.+|.+.+.......-.|++.++..||+|||++....
T Consensus 407 ~~~~v~~~~~~~viyee~sd~winiHd~f~~~~~~~~e~~~~fi~asE~~~Frhly~its~lk~ng~~~s~~~~p~~~d~ 486 (867)
T KOG2281|consen 407 LNMGVPDDVSPEVIYEEPSDGWINIHDIFHPLPQSTHEASYPFIWASEETGFRHLYLITSLLKPNGYCLSLGSAPLDQDF 486 (867)
T ss_pred hhhcCCcCCCcceEEecCCCceEEhhhcccccccCCccceeeEEEecccccceEEEEEEeecccCCCcccccCCcccccc
Confidence 567788888999999999998865432333489999999999999987433
Q ss_pred ----ceeeceeecCeEEEEE--EEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCC
Q 008274 198 ----TCLGPITEGDWMVEQI--VGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNM 271 (571)
Q Consensus 198 ----~~~~~lT~~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g 271 (571)
++...||+|+|++... .+++.-.+.+||.++.++|.+.|||.+.+...| ...+||...-.+.+.++.+.
T Consensus 487 ~c~i~ee~altSgeweVl~r~Gi~VdE~~~LVYf~gt~d~PlE~hLyvvsye~~g-----~~~rlt~~g~sh~~~l~~~~ 561 (867)
T KOG2281|consen 487 KCRIKEEIALTSGEWEVLARHGIWVDEVRKLVYFVGTKDTPLEHHLYVVSYENPG-----EIARLTEPGYSHSCELDQQC 561 (867)
T ss_pred cCcchhheeecccceeehhhcCeeecccceEEEEEccCCCCceeeEEEEEEecCC-----ceeeccCCCcccchhhhhhh
Confidence 2357789999998543 347888899999999999999999999994233 67788876656777888999
Q ss_pred CEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhcc-----CCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCC
Q 008274 272 RNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKR-----LQLEPPDIVQIQANDGTVLYGALYKPDESRYGP 346 (571)
Q Consensus 272 ~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~ 346 (571)
+.++..+++...||...++.+...+..... ........+.. -.+..++.+.|++..|..+.+.+|+|.+.+++
T Consensus 562 d~fv~~~~sv~sP~cv~~y~ls~~~~~~l~-~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pg- 639 (867)
T KOG2281|consen 562 DHFVSYYSSVGSPPCVSLYSLSWPENDPLP-KQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPG- 639 (867)
T ss_pred hhHhhhhhcCCCCceEEEEeccCCccCccc-chhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCCCC-
Confidence 999999999999999999988665542222 11111222222 23344577888998899999999999987655
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+|+|+|++++|||+.|.+.++|...-......|+++||+|+.+|.||+..+|..|+..+..++|..+++|..+++++|++
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 67999999999999999999998766667789999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCC
Q 008274 427 Q-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK 505 (571)
Q Consensus 427 ~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~ 505 (571)
+ +++|.+||+|.|||||||++++.++++|+.|+++|+++|+++|..|+..|.|+|||.|..+...|.+.|...++.++.
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~Veklp 799 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLP 799 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCC
Confidence 8 589999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ---CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 506 ---GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 506 ---~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..+||+||.-|++|++.+...+..+|.++|++.++++||++.|++..++..+....+++.|++++
T Consensus 800 depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 800 DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 46999999999999999999999999999999999999999999988888999999999999863
No 2
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-59 Score=495.51 Aligned_cols=543 Identities=28% Similarity=0.457 Sum_probs=455.8
Q ss_pred eeecccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 9 QTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 9 ~~~g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
|+||++||+||||+ ....++||||||.++||...+++.++.+.++.+.++..| +....++|+++|.+||.+.|+++|+
T Consensus 192 i~ng~~Dw~yeeEv~~~~~a~wwsp~g~~la~~~~~dt~V~~~~~~~~~~~~~y-p~~~~~~ypk~g~~np~v~l~v~~~ 270 (755)
T KOG2100|consen 192 IFNGKPDWIYEEEVLSSDSAIWWSPDGDRLAYASFNDTKVETINLPGYTDDDQY-PKSTNFHYPKAGAPNPAVSLFVVDL 270 (755)
T ss_pred EEcCCCCceeehhhcccCccceeCCCCceeEEEEecccccceEEeccccccccC-cccceeecCCCCCCCCeEEEEEEeC
Confidence 89999999999887 568999999999999999999999999999998887324 7788999999999999999999996
Q ss_pred CCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCccc
Q 008274 88 AGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTP 166 (571)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~ 166 (571)
.......+.. .......+.++..+.|..+.+.++.+.+|.++...+-.||.. +.++........ +|+..+.. .+
T Consensus 271 ~~~~~~~~~~---~~~~~~~~~~~~~~~W~~~~~~~~~~~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~~W~~~~~~-~~ 345 (755)
T KOG2100|consen 271 HDPPRLGIPP---PTNQRSGEYYVTNVKWDTTEKVLVVWTNREQNISVETLCDTP-GICRVVYEESSDGGWVEHQNV-EP 345 (755)
T ss_pred CCceeeccCC---ccccccCceEEEEEEEecCccEEEEEEccCCCeeeeEEecCc-ccceeeEeccccccccccccc-cc
Confidence 6554332111 012234578999999999999999999999999999999999 777666555555 48865430 11
Q ss_pred CCCCCccCCCe-EEEEEecCC-ccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeC
Q 008274 167 LDKGVTKYSGG-FIWASEKTG-FRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 243 (571)
Q Consensus 167 ~~~~~~~~~d~-~~~~s~~~g-~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~ 243 (571)
. ..++... +++.+...+ +.|+..+...++ ....||.+.|++..+..++.+++.+||.+...++..+++|++++
T Consensus 346 ~---~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~- 421 (755)
T KOG2100|consen 346 V---FSSDGSSYLKVDSVSDGGYNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISL- 421 (755)
T ss_pred e---EeecCCceeEEEeeccCCEEEEEEEEcCCCCccccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEc-
Confidence 1 0122223 444556655 999988887776 78899999999998888998999999999999888999999998
Q ss_pred CCCCCCCCCCeEecCCC-----ceEEEEECCCCCEEEEEeeCCCCCCE-EEEEEcCCCceeEeccCCCCChhhhccCCCC
Q 008274 244 PDWNHTLEAPVKLTNGK-----GKHVAVLDHNMRNFVDFHDSLDSPPR-ILLCSLQDGSLVLPLYEQPLTVPRIKRLQLE 317 (571)
Q Consensus 244 ~~g~~~~~~~~~lt~~~-----g~~~~~~s~~g~~~v~~~s~~~~p~~-l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (571)
+.. ....+|+.. ...++++++..++++..++.+..|.. +-+....+......|..+......+....++
T Consensus 422 -~~~----~~~~lt~~~~~~~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~~~~~~~Le~n~~~~~~~~~~~~p 496 (755)
T KOG2100|consen 422 -GSG----TVESLTCSLITGPCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKNSKTIVVLETNEELKKTIENVALP 496 (755)
T ss_pred -ccc----ccccccccCCCCcceEEEEecCCcccEEEEEccCCCCCcceeeccccccceEEEEeccChhhHHHhhcccCC
Confidence 332 334466543 24466888889999999988776643 2222332333356788887788888878888
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...+.. +|....+.+..|++.. ..+++|+|+.+||||+++.+...|...|. ...+...|++|+.+|+||++++
T Consensus 497 ~~~~~~i~~-~~~~~~~~~~lP~~~~-~~~kyPllv~~yGGP~sq~v~~~~~~~~~--~~~~s~~g~~v~~vd~RGs~~~ 572 (755)
T KOG2100|consen 497 IVEFGKIEI-DGITANAILILPPNFD-PSKKYPLLVVVYGGPGSQSVTSKFSVDWN--EVVVSSRGFAVLQVDGRGSGGY 572 (755)
T ss_pred cceeEEEEe-ccEEEEEEEecCCCCC-CCCCCCEEEEecCCCCcceeeeeEEecHH--HHhhccCCeEEEEEcCCCcCCc
Confidence 888888887 8899999999999874 34699999999999999888888877664 3467789999999999999999
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC-CeeEEEEEcCccCCcccccch
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP-DVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 476 (571)
|..+..+.++++|..+++|++.+++++.+.+++|.+||+|+|+|+||++++.++...+ +.|+|+++++|+++|..++..
T Consensus 573 G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~ 652 (755)
T KOG2100|consen 573 GWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDST 652 (755)
T ss_pred chhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeeccc
Confidence 9999999999999999999999999999999999999999999999999999999887 889999999999999999999
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcE-EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCc
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKL-LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRD 555 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~-lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 555 (571)
+.++++|.|.++...|.+.++...+..++.|. |++||+.|.+|+++++..++++|+.+|+++++.+||+++|++.....
T Consensus 653 ~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~ 732 (755)
T KOG2100|consen 653 YTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEV 732 (755)
T ss_pred ccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccc
Confidence 99999999999888899999999999999766 99999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHh
Q 008274 556 RIYMEERIWEFIERT 570 (571)
Q Consensus 556 ~~~~~~~i~~fl~~~ 570 (571)
...++..+..||..+
T Consensus 733 ~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 733 ISHLYEKLDRFLRDC 747 (755)
T ss_pred hHHHHHHHHHHHHHH
Confidence 899999999999865
No 3
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-46 Score=395.12 Aligned_cols=498 Identities=24% Similarity=0.294 Sum_probs=346.5
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCC-CeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEI-PRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG 101 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~ 101 (571)
...+...|||+|+++++........ ... +. .....+.+-..+....+..++++|..+ ....+
T Consensus 101 ~~v~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~------ 163 (620)
T COG1506 101 FGVSDARWSPDGDRIAFLTAEGASKRDGG-------DH---LFVDRLPVWFDGRGGERSDLYVVDIES-KLIKL------ 163 (620)
T ss_pred cccccceeCCCCCeEEEEecccccccCCc-------ee---eeecccceeecCCCCcccceEEEccCc-ccccc------
Confidence 3467788999999999943221110 000 00 111122222233333456889999887 22222
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccC--c-cEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeE
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQ--T-KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGF 178 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~--~-~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~ 178 (571)
......+..+.|.+|++.++......+ . ....+.....++....++..... . ....+.+ ++..+
T Consensus 164 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~-------~gk~~ 230 (620)
T COG1506 164 ---GLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLTPGEGS--I-SKLAFDA-------DGKSI 230 (620)
T ss_pred ---cCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEEcCCCce--e-eeeeeCC-------CCCee
Confidence 123445555667777776665544443 1 12233333356665555443211 0 0000111 12224
Q ss_pred EEEEecC--Cc---cEEEEEeCCCceeec-eeecC--eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC
Q 008274 179 IWASEKT--GF---RHLYLHDINGTCLGP-ITEGD--WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL 250 (571)
Q Consensus 179 ~~~s~~~--g~---~~l~~~~~~~~~~~~-lT~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~ 250 (571)
.+..... |+ ..+++++.+.+.... +...+ +..... ...-++..++|.+.... ....++.+.. .+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~~l~~~~~--~~~--- 303 (620)
T COG1506 231 ALLGTESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAV-EGGLDGDGLLFIATDGG-GSSPLFRVDD--LGG--- 303 (620)
T ss_pred EEeccCCccCccccceEEEEeccccccceeeccCCcccCcHHh-ccccCCCcEEEEEecCC-CceEEEEEec--cCC---
Confidence 4443331 32 445555522222222 11111 111111 12246777888887743 2477777764 222
Q ss_pred CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCc
Q 008274 251 EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGT 330 (571)
Q Consensus 251 ~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 330 (571)
. ..+...+......++.+++.+++.++++..||++|+.+. +++.+.+.. ....+.+..+.+++.++++..||.
T Consensus 304 -~-~~~~~~~~~~v~~f~~~~~~~~~~~s~~~~p~~i~~~~~--~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~~dG~ 376 (620)
T COG1506 304 -G-VEGLSGDDGGVPGFDVDGRKLALAYSSPTEPPEIYLYDR--GEEAKLTSS---NNSGLKKVKLAEPEPVTYKSNDGE 376 (620)
T ss_pred -c-eeeecCCCceEEEEeeCCCEEEEEecCCCCccceEEEcC--CCceEEeec---ccccccccccCCceEEEEEcCCCC
Confidence 2 222223323334566699999999999999999999986 333333333 334556688999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCC
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 410 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~ 410 (571)
+++++++.|.+.+. .+++|+||++||||..+.. ..+....+.|+++||+|+.+|+||++++|++|......+++
T Consensus 377 ~i~~~l~~P~~~~~-~k~yP~i~~~hGGP~~~~~-----~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g 450 (620)
T COG1506 377 TIHGWLYKPPGFDP-RKKYPLIVYIHGGPSAQVG-----YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWG 450 (620)
T ss_pred EEEEEEecCCCCCC-CCCCCEEEEeCCCCccccc-----cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccC
Confidence 99999999998643 3569999999999977652 24556789999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCC-----
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP----- 485 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~----- 485 (571)
..+++|+.++++++.+++.+|++|++|+|+||||+|+++++.+.| +|+|+++.+++++|..+...+.+.+.+.+
T Consensus 451 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (620)
T COG1506 451 GVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGG 529 (620)
T ss_pred CccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhCC
Confidence 999999999999999999999999999999999999999999776 89999999999888766555444433222
Q ss_pred --CCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 486 --SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 486 --~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
..+.+.|.+.||+.+++++++|+|||||+.|.+||++++++|+++|+.+|+++++++||+++|++..+++....++++
T Consensus 530 ~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 530 GPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred CcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 115678999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHhC
Q 008274 564 WEFIERTL 571 (571)
Q Consensus 564 ~~fl~~~l 571 (571)
++||+++|
T Consensus 610 ~~~~~~~~ 617 (620)
T COG1506 610 LDWFKRHL 617 (620)
T ss_pred HHHHHHHh
Confidence 99999985
No 4
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=1.8e-44 Score=382.32 Aligned_cols=482 Identities=16% Similarity=0.157 Sum_probs=336.5
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|||. .+..+.+. .+|++.|+++|+...-.+
T Consensus 129 l~~~~~Spdg~~la~~-~d~~G~E~------------------------------~~l~v~d~~tg~~l~~~i------- 170 (686)
T PRK10115 129 LGGMAITPDNTIMALA-EDFLSRRQ------------------------------YGIRFRNLETGNWYPELL------- 170 (686)
T ss_pred EeEEEECCCCCEEEEE-ecCCCcEE------------------------------EEEEEEECCCCCCCCccc-------
Confidence 4567899999999996 44333222 468999999886322111
Q ss_pred CCCCceeEEEEEccCCeEEEEEEecc--CccEEEEEEECCCC--ceEEEEEeecCC-ee----eccCCcccC--------
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRS--QTKLKVLKFDIKTG--QRKVILVEELDS-WV----NLHDCFTPL-------- 167 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~--~~~~~i~~~d~~~g--~~~~l~~~~~~~-w~----~~~~~~~~~-------- 167 (571)
. ... ..+.|++||+.+++..++. ....+||+.++.|+ +.+.|.++.+.. |. .....+...
T Consensus 171 ~-~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~ 247 (686)
T PRK10115 171 D-NVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTS 247 (686)
T ss_pred c-Ccc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccc
Confidence 1 112 4589999999777766643 24568999999999 556666543221 11 000000000
Q ss_pred --------------------CCCC----ccCCCeEEEEEecC-CccEEEEEeCC-Cceeeceeec--CeEEEEEEEEeec
Q 008274 168 --------------------DKGV----TKYSGGFIWASEKT-GFRHLYLHDIN-GTCLGPITEG--DWMVEQIVGVNEA 219 (571)
Q Consensus 168 --------------------~~~~----~~~~d~~~~~s~~~-g~~~l~~~~~~-~~~~~~lT~~--~~~~~~~~~~s~d 219 (571)
.... ....+.+++.++.+ ....|+.+++. .++.+.|... +..+.++. ++
T Consensus 248 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~-~~-- 324 (686)
T PRK10115 248 EVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFT-LF-- 324 (686)
T ss_pred cEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEE-EE--
Confidence 0000 00011233334332 24456666654 2333444333 33455443 43
Q ss_pred CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCCceE-EEEEC--CCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 220 SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKGKH-VAVLD--HNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 220 g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~g~~-~~~~s--~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
++.|++....++. .+++.+++ ++. ....|+ ..+... ....+ +++..+++.++++.+|+.+|.+++.++
T Consensus 325 ~~~l~~~~~~~g~--~~l~~~~~--~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~ 396 (686)
T PRK10115 325 TDWLVVEERQRGL--TSLRQINR--KTR----EVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTG 396 (686)
T ss_pred CCEEEEEEEeCCE--EEEEEEcC--CCC----ceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCC
Confidence 6789999888874 77888887 443 455665 333222 22334 566789999999999999999998665
Q ss_pred ceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhh
Q 008274 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMR 375 (571)
Q Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~ 375 (571)
+ .+.|.... .+.++...+ .++.+.+++.||.+|+++++.+++. ..+++.|+||++|||++.+. .+.|...
T Consensus 397 ~-~~~l~~~~--~~~~~~~~~-~~e~v~~~s~DG~~Ip~~l~~~~~~-~~~~~~P~ll~~hGg~~~~~-----~p~f~~~ 466 (686)
T PRK10115 397 E-RRVLKQTE--VPGFDAANY-RSEHLWITARDGVEVPVSLVYHRKH-FRKGHNPLLVYGYGSYGASI-----DADFSFS 466 (686)
T ss_pred c-EEEEEecC--CCCcCcccc-EEEEEEEECCCCCEEEEEEEEECCC-CCCCCCCEEEEEECCCCCCC-----CCCccHH
Confidence 4 45555432 223444444 8899999999999999965554332 22356799999999998764 3345556
Q ss_pred hHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC
Q 008274 376 AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP 455 (571)
Q Consensus 376 ~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~ 455 (571)
.+.|+++||+|+.+|+||++++|+.|..+.....+..+++|+++++++|++++++|++|++++|.|+||+++.+++.++|
T Consensus 467 ~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P 546 (686)
T PRK10115 467 RLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP 546 (686)
T ss_pred HHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh
Confidence 78899999999999999999999999998888888889999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEcCccCCccccc-----c-hhhh-hhcCCCCCC--hhhhccCCcchhhccCCCc-EEEEecCCCCCCChHHHH
Q 008274 456 DVFQCAVSGAPVTSWDGYD-----T-FYTE-KYMGLPSED--PVGYEYSSVMHHVHKMKGK-LLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 456 ~~~~~~v~~~~~~~~~~~~-----~-~~~~-~~~g~~~~~--~~~~~~~s~~~~~~~~~~p-~lli~G~~D~~v~~~~~~ 525 (571)
++|+|+|+..|+.|+..+. . ...+ ...|.|++. .+.+.+.||+.++++++.| +||+||++|.+||+.++.
T Consensus 547 dlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~ 626 (686)
T PRK10115 547 ELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPA 626 (686)
T ss_pred hheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHH
Confidence 9999999999999986431 1 1111 223777643 2345679999999999988 677799999999999999
Q ss_pred HHHHHHHHcCCCeeEEEc---CCCCCCCCCCCcHHH---HHHHHHHHHHHh
Q 008274 526 RLINALVAARKPYEILIF---PDERHMPRRHRDRIY---MEERIWEFIERT 570 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~---~~~~H~~~~~~~~~~---~~~~i~~fl~~~ 570 (571)
+|+++|++++.+.+++++ +++||+. ..++.. .....+.|+-..
T Consensus 627 k~~a~Lr~~~~~~~~vl~~~~~~~GHg~--~~~r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 627 KWVAKLRELKTDDHLLLLCTDMDSGHGG--KSGRFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred HHHHHHHhcCCCCceEEEEecCCCCCCC--CcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999888888 9999984 233333 333446666543
No 5
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=100.00 E-value=2.5e-40 Score=328.06 Aligned_cols=264 Identities=36% Similarity=0.605 Sum_probs=217.8
Q ss_pred eeeecccceeeeec-cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCC-CCCCcccccCCCCCCCCceEEEEEE
Q 008274 8 LQTHGLAEYIAQEE-MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV-GSEAQEDHAYPFAGASNVKVRLGVV 85 (571)
Q Consensus 8 ~~~~g~~~~~~~~~-~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~y~~~g~~~~~~~l~~~ 85 (571)
.|+||+|||||||| +.+..++||||||++|||.+.|++.++.+.++.+..... | |....++||++|++|+.+.|+++
T Consensus 85 ~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~y-p~~~~~~YPk~G~~np~v~l~v~ 163 (353)
T PF00930_consen 85 GIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQY-PEVESIRYPKAGDPNPRVSLFVV 163 (353)
T ss_dssp TEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS--EEEEEE--BTTS---EEEEEEE
T ss_pred eEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccC-CcccccccCCCCCcCCceEEEEE
Confidence 57899999999999 678999999999999999999999999999999987642 3 78899999999999999999999
Q ss_pred ECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCc
Q 008274 86 SAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCF 164 (571)
Q Consensus 86 dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~ 164 (571)
|+++++.+.++... .+...+.++..+.|++|++ +++.+++|.|+..+|+.||+++|+++.+.++...+|++....+
T Consensus 164 ~~~~~~~~~~~~~~---~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~ 240 (353)
T PF00930_consen 164 DLASGKTTELDPPN---SLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPP 240 (353)
T ss_dssp ESSSTCCCEE---H---HHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEE
T ss_pred ECCCCcEEEeeecc---ccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeeccc
Confidence 99999887665420 0124688999999999999 8889999999999999999999999999988888998654433
Q ss_pred ccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCC
Q 008274 165 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 244 (571)
Q Consensus 165 ~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~ 244 (571)
.+. ..++++|+++++++|+.|||+++.+++..++||.|+|++.++..|+++++.|||+++.++|.++|||++++
T Consensus 241 ~~~----~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~-- 314 (353)
T PF00930_consen 241 HFL----GPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSL-- 314 (353)
T ss_dssp EE-----TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEET--
T ss_pred ccc----cCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEe--
Confidence 332 12455699999999999999999999999999999999988889999999999999998899999999999
Q ss_pred C-CCCCCCCCeEecCCCceE-EEEECCCCCEEEEEeeCCCCCC
Q 008274 245 D-WNHTLEAPVKLTNGKGKH-VAVLDHNMRNFVDFHDSLDSPP 285 (571)
Q Consensus 245 ~-g~~~~~~~~~lt~~~g~~-~~~~s~~g~~~v~~~s~~~~p~ 285 (571)
+ +. .++|||+..+.+ .+++||+|++++..+++++.||
T Consensus 315 ~~~~----~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 315 DSGG----EPKCLTCEDGDHYSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp TETT----EEEESSTTSSTTEEEEE-TTSSEEEEEEESSSSCE
T ss_pred CCCC----CeEeccCCCCCceEEEECCCCCEEEEEEcCCCCCC
Confidence 5 44 789999988777 8899999999999999999885
No 6
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-31 Score=263.94 Aligned_cols=482 Identities=18% Similarity=0.150 Sum_probs=334.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+..++..|||++.+||. .|..+.+.| .|.+.|+++|+...-.+
T Consensus 129 ~~Lg~~~~s~D~~~la~s-~D~~G~e~y------------------------------~lr~kdL~tg~~~~d~i----- 172 (682)
T COG1770 129 FSLGAASISPDHNLLAYS-VDVLGDEQY------------------------------TLRFKDLATGEELPDEI----- 172 (682)
T ss_pred eeeeeeeeCCCCceEEEE-EecccccEE------------------------------EEEEEecccccccchhh-----
Confidence 345667889999999994 555554443 57899999998654433
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCC--CceEEEEEeecCCeeeccCCcccCCCCCccCCCeEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKT--GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFI 179 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~--g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~ 179 (571)
......++|.+|++.+.+...+.. ....|++..+.+ .+.+.|.++.+..|.= .+. ..+++.++
T Consensus 173 -----~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~------~v~---~s~s~~yi 238 (682)
T COG1770 173 -----TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFL------SVG---RSRSEAYI 238 (682)
T ss_pred -----cccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEE------Eee---eccCCceE
Confidence 223456899999997777766554 455899999998 7778888887775431 111 11334466
Q ss_pred EEEe-cCCccEEEEEeCCCce--eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC-------CC
Q 008274 180 WASE-KTGFRHLYLHDINGTC--LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN-------HT 249 (571)
Q Consensus 180 ~~s~-~~g~~~l~~~~~~~~~--~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~-------~~ 249 (571)
+++. ..--.++++++.+... ++.+..-.-.+ .......++..|+.+|.++ .+..|++..+..+.. ++
T Consensus 239 ~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~--eY~~eh~~d~f~i~sN~~g-knf~l~~ap~~~~~~~w~~~I~h~ 315 (682)
T COG1770 239 VISLGSHITSEVRLLDADDPEAEPKVVLPRENGV--EYSVEHGGDRFYILSNADG-KNFKLVRAPVSADKSNWRELIPHR 315 (682)
T ss_pred EEEcCCCcceeEEEEecCCCCCceEEEEEcCCCc--EEeeeecCcEEEEEecCCC-cceEEEEccCCCChhcCeeeeccC
Confidence 6554 3345788888865543 33333211111 1234556889999999888 478888876511100 00
Q ss_pred -----------------------CCCCeEecCCCc-e---------EEE--EE--CCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 250 -----------------------LEAPVKLTNGKG-K---------HVA--VL--DHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 250 -----------------------~~~~~~lt~~~g-~---------~~~--~~--s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
+...+.....++ . .+. +. ..+...+.+.+++.++|..++-+++
T Consensus 316 ~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm 395 (682)
T COG1770 316 EDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDM 395 (682)
T ss_pred CCceeeeeeeeccEEEEEecccCCceEEEEecCCCceeeEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeec
Confidence 001111111011 0 011 11 2356678899999999999999999
Q ss_pred CCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccc
Q 008274 293 QDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTV 372 (571)
Q Consensus 293 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~ 372 (571)
.+++. ++...+.....+++..+ ..+.+..+..||.+++..++.-.+. ..+++.|++++.+|..+... ... |
T Consensus 396 ~t~er--~~LkqqeV~~g~dp~~Y-~s~riwa~a~dgv~VPVSLvyrkd~-~~~g~~p~lLygYGaYG~s~-~p~----F 466 (682)
T COG1770 396 ATGER--TLLKQQEVPGGFDPEDY-VSRRIWATADDGVQVPVSLVYRKDT-KLDGSAPLLLYGYGAYGISM-DPS----F 466 (682)
T ss_pred cCCcE--EEEEeccCCCCCChhHe-EEEEEEEEcCCCcEeeEEEEEeccc-CCCCCCcEEEEEeccccccC-CcC----c
Confidence 88873 34443333333555455 5678888889999999998877653 23467899999999877654 233 3
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+...-.|.++|++......||.|.-|..|...+........+.|++++.++|.++++.+.++|+++|.|+||.++..++.
T Consensus 467 s~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 467 SIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred ccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHh
Confidence 34456788999999999999999999999998887777888999999999999999999999999999999999999999
Q ss_pred cCCCeeEEEEEcCccCCccc---------ccchhhhhhcCCCCCChh---hhccCCcchhhccCC-CcEEEEecCCCCCC
Q 008274 453 RFPDVFQCAVSGAPVTSWDG---------YDTFYTEKYMGLPSEDPV---GYEYSSVMHHVHKMK-GKLLLVHGMIDENV 519 (571)
Q Consensus 453 ~~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~---~~~~~s~~~~~~~~~-~p~lli~G~~D~~v 519 (571)
+.|++|+++|+..|+.|-.. ....|.|+ |.|. +++ ..+.+||+.++..-. +|+|++.|..|.+|
T Consensus 547 ~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EW--GNP~-d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV 623 (682)
T COG1770 547 MAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEW--GNPL-DPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRV 623 (682)
T ss_pred hChhhhhheeecCCccchhhhhcCCCCCCCccchhhh--CCcC-CHHHHHHHhhcCchhccccCCCCceEEEccccCCcc
Confidence 99999999999999987421 12233333 7776 443 447889999887754 68999999999999
Q ss_pred ChHHHHHHHHHHHHcCC---CeeEEEcCCCCCCC-CCCCcHHHHHHHHHHHHHH
Q 008274 520 HFRHTARLINALVAARK---PYEILIFPDERHMP-RRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 520 ~~~~~~~~~~~l~~~~~---~~~~~~~~~~~H~~-~~~~~~~~~~~~i~~fl~~ 569 (571)
...+..++.++|+.... ++-+..=-++||+- +..-....-...-..|+.+
T Consensus 624 ~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~l~ 677 (682)
T COG1770 624 QYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFLLK 677 (682)
T ss_pred ccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHHhh
Confidence 99999999999998764 34444546789974 3322233333333445543
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=100.00 E-value=5.7e-33 Score=256.70 Aligned_cols=199 Identities=36% Similarity=0.542 Sum_probs=177.0
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+...++|+++||+|+.+|+||++++|.+|......+++..+++|+.++++++++++.+|++||+|+|+|+||++++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 34578999999999999999999999999998888888889999999999999999999999999999999999999999
Q ss_pred cCCCeeEEEEEcCccCCcccccch---hhh-hhc--CCCCCChhhhccCCcchhhcc--CCCcEEEEecCCCCCCChHHH
Q 008274 453 RFPDVFQCAVSGAPVTSWDGYDTF---YTE-KYM--GLPSEDPVGYEYSSVMHHVHK--MKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 453 ~~~~~~~~~v~~~~~~~~~~~~~~---~~~-~~~--g~~~~~~~~~~~~s~~~~~~~--~~~p~lli~G~~D~~v~~~~~ 524 (571)
++|++|+++++.+|+.++..+... +.. ++. +.+..+.+.|...+|+..+.+ +++|+||+||++|.+||++++
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s 163 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQS 163 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHH
T ss_pred ccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHH
Confidence 999999999999999997655432 333 222 566667888989999999999 889999999999999999999
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+++++|+++|+++++++||+++|++...++...+.+++++||+++|
T Consensus 164 ~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 164 LRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999888888899999999999986
No 8
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.96 E-value=2.8e-26 Score=223.93 Aligned_cols=292 Identities=20% Similarity=0.231 Sum_probs=239.6
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCC
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYG 345 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~ 345 (571)
+-+-+|+.+.+.+.+.++|+.+++.++..+ +++.+.. ....++...+ .++++..++.||.+|++++.. ++.+.
T Consensus 346 ~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~-eLe~ik~---~p~~FDa~~~-~veQ~~atSkDGT~IPYFiv~-K~~~~- 418 (648)
T COG1505 346 SADKDGDEVFLAFTSFTTPSTLYRLDLFGG-ELEVIRE---QPVQFDADNY-EVEQFFATSKDGTRIPYFIVR-KGAKK- 418 (648)
T ss_pred cCCCCCcEEEEEeecccCCCceEEEecCCc-eehhhhh---ccCCcCccCc-eEEEEEEEcCCCccccEEEEe-cCCcC-
Confidence 344578889999999999999999998444 4555544 2334554455 678888899999999999998 65422
Q ss_pred CCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 346 PPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 346 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+ +.|++|+-|||..... .+.|......+.++|.+.+..|.||.|.+|.+|+.+......+..++|+.++++.|+
T Consensus 419 d-~~pTll~aYGGF~vsl-----tP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi 492 (648)
T COG1505 419 D-ENPTLLYAYGGFNISL-----TPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLI 492 (648)
T ss_pred C-CCceEEEecccccccc-----CCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHH
Confidence 2 6799999999876654 244455567888999999999999999999999999988888899999999999999
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch-----hhhhhcCCCCC--ChhhhccCCcc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-----YTEKYMGLPSE--DPVGYEYSSVM 498 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~g~~~~--~~~~~~~~s~~ 498 (571)
++++..+++++|.|.|-||.++..++.++|++|.|+++..|+.|+..|... |...| |.|.. +.....++||+
T Consensus 493 ~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EY-G~Pd~P~d~~~l~~YSPy 571 (648)
T COG1505 493 KRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEY-GNPDDPEDRAFLLAYSPY 571 (648)
T ss_pred HhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhc-CCCCCHHHHHHHHhcCch
Confidence 999999999999999999999999999999999999999999999877543 44444 66654 23456789999
Q ss_pred hhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH-HHHHHHHHHHHHHhC
Q 008274 499 HHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR-IYMEERIWEFIERTL 571 (571)
Q Consensus 499 ~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~i~~fl~~~l 571 (571)
++++.-+ +|+||..+..|.+|+|.++.+|+.+|++.+.++-+.+--++||+-..+... ......++.||.+.|
T Consensus 572 ~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 572 HNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred hcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 9887743 699999999999999999999999999999999988888999987544433 445666788888765
No 9
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.1e-25 Score=220.62 Aligned_cols=293 Identities=18% Similarity=0.215 Sum_probs=223.5
Q ss_pred CCCEEEEEeeCCCCCCEEEEEEcCCCcee-EeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCC
Q 008274 270 NMRNFVDFHDSLDSPPRILLCSLQDGSLV-LPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPP 348 (571)
Q Consensus 270 ~g~~~v~~~s~~~~p~~l~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~ 348 (571)
+.+.+.|.++|+-+|+.||.+++..++.. +.+.+.....+.+....+ ..+++.+++.||..++..++.-+.. ..+++
T Consensus 392 ~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y-~~~r~~~~SkDGt~VPM~Iv~kk~~-k~dg~ 469 (712)
T KOG2237|consen 392 KSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDY-VVERIEVSSKDGTKVPMFIVYKKDI-KLDGS 469 (712)
T ss_pred CCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccce-EEEEEEEecCCCCccceEEEEechh-hhcCC
Confidence 45678899999999999999999777321 112222222344443333 6788999999999999998885443 23357
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|++|+.||+.+... ..+|.. ....|..+|++.+..|.||.|++|..|+..+.....++.++|++++++||++++
T Consensus 470 ~P~LLygYGay~isl-~p~f~~----srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g 544 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISL-DPSFRA----SRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG 544 (712)
T ss_pred CceEEEEecccceee-cccccc----ceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC
Confidence 899999999887764 344433 334566799999999999999999999998888778888999999999999999
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-----chhhhhh--cCCCCCChhhhccCCcchhh
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----TFYTEKY--MGLPSEDPVGYEYSSVMHHV 501 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~--~g~~~~~~~~~~~~s~~~~~ 501 (571)
++.++++++.|.|.||.++..++.++|++|+|+++..|+.|...+. ..+.+.+ .|.|. +-+.+...+|++..
T Consensus 545 yt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~-~~~~~~~i~~y~pv 623 (712)
T KOG2237|consen 545 YTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPE-DFEDLIKISPYSPV 623 (712)
T ss_pred CCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChh-hhhhhheecccCcc
Confidence 9999999999999999999999999999999999999999865432 2233332 24444 33555666666666
Q ss_pred ccCC-----CcEEEEecCCCCCCChHHHHHHHHHHHHcC-------CCeeEEEcCCCCCCCCCCC-cHHHHHHHHHHHHH
Q 008274 502 HKMK-----GKLLLVHGMIDENVHFRHTARLINALVAAR-------KPYEILIFPDERHMPRRHR-DRIYMEERIWEFIE 568 (571)
Q Consensus 502 ~~~~-----~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~ 568 (571)
++++ +-+|+..+.+|++|.+.++.++.++|+..- .++-+.+..++||+...+. .+.+-....++||.
T Consensus 624 ~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~ 703 (712)
T KOG2237|consen 624 DNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLA 703 (712)
T ss_pred CCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHH
Confidence 6665 358999999999999999999999998642 3578889999999974332 33444555677776
Q ss_pred Hh
Q 008274 569 RT 570 (571)
Q Consensus 569 ~~ 570 (571)
+.
T Consensus 704 K~ 705 (712)
T KOG2237|consen 704 KM 705 (712)
T ss_pred HH
Confidence 64
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=1.5e-23 Score=196.12 Aligned_cols=213 Identities=14% Similarity=0.105 Sum_probs=154.5
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~ 397 (571)
+....+.+.+|..|.+|+..|.+. ..++.|+||++||-...+. .+..++++|+++||+|+.+|.||+ |.|
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~~~~-------~~~~~A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFARRMD-------HFAGLAEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCCChH-------HHHHHHHHHHHCCCEEEEecCCCCCCCC
Confidence 445667788999999999999742 2257789999999655432 256679999999999999999886 777
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 477 (571)
++++....... ...|+.++++|+.++ +.++|+|+||||||.+++.+|... .++++|+.+|+.++..+....
T Consensus 80 ~G~~~~~t~s~----g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~ 150 (307)
T PRK13604 80 SGTIDEFTMSI----GKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERA 150 (307)
T ss_pred CCccccCcccc----cHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHh
Confidence 66654322111 268999999999886 346899999999999987666643 378999999998854211100
Q ss_pred hhh---------------hcCCCCCChh---------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 008274 478 TEK---------------YMGLPSEDPV---------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 533 (571)
Q Consensus 478 ~~~---------------~~g~~~~~~~---------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~ 533 (571)
... +.|....... .....+|...+++++.|+|++||+.|..||++.++.+++++..
T Consensus 151 ~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s 230 (307)
T PRK13604 151 LGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS 230 (307)
T ss_pred hhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc
Confidence 000 0010000000 0123455677888899999999999999999999999998643
Q ss_pred cCCCeeEEEcCCCCCCCC
Q 008274 534 ARKPYEILIFPDERHMPR 551 (571)
Q Consensus 534 ~~~~~~~~~~~~~~H~~~ 551 (571)
.+.++.++|+++|.+.
T Consensus 231 --~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 231 --EQCKLYSLIGSSHDLG 246 (307)
T ss_pred --CCcEEEEeCCCccccC
Confidence 5789999999999984
No 11
>PRK10566 esterase; Provisional
Probab=99.91 E-value=7.2e-23 Score=194.47 Aligned_cols=225 Identities=19% Similarity=0.094 Sum_probs=149.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh-HHHHhc--c
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF-EASIKH--N 408 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~-~~~~~~--~ 408 (571)
+..+.+.|... ..++.|+||++||.++... .+..+++.|+++||.|+++|+||+|.+.... ...... .
T Consensus 12 ~~~~~~~p~~~--~~~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~ 82 (249)
T PRK10566 12 IEVLHAFPAGQ--RDTPLPTVFFYHGFTSSKL-------VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQ 82 (249)
T ss_pred cceEEEcCCCC--CCCCCCEEEEeCCCCcccc-------hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHH
Confidence 44556677542 2246799999999876543 2445688999999999999999987531110 000000 0
Q ss_pred CCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEc-CccCCcccccchhhhhhcCCCCC
Q 008274 409 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG-APVTSWDGYDTFYTEKYMGLPSE 487 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~ 487 (571)
......+|+.++++++.+++.+|.++|+++|||+||.+++.++.++|+...+++.. ++.... .....+.......+..
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 161 (249)
T PRK10566 83 ILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTS-LARTLFPPLIPETAAQ 161 (249)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHH-HHHHhccccccccccc
Confidence 00112567788889988887789999999999999999999999888764443332 221100 0000000000000000
Q ss_pred Ch------hhhccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCC--CeeEEEcCCCCCCCCCCCcHHH
Q 008274 488 DP------VGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARK--PYEILIFPDERHMPRRHRDRIY 558 (571)
Q Consensus 488 ~~------~~~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~~~~ 558 (571)
.. ..+...++...+.++ ++|+|++||++|.++|++++.++.++++.++. ++++..+++++|.+. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~-----~~ 236 (249)
T PRK10566 162 QAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT-----PE 236 (249)
T ss_pred HHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC-----HH
Confidence 00 112223444456666 68999999999999999999999999998876 488889999999973 35
Q ss_pred HHHHHHHHHHHhC
Q 008274 559 MEERIWEFIERTL 571 (571)
Q Consensus 559 ~~~~i~~fl~~~l 571 (571)
..+.+.+||+++|
T Consensus 237 ~~~~~~~fl~~~~ 249 (249)
T PRK10566 237 ALDAGVAFFRQHL 249 (249)
T ss_pred HHHHHHHHHHhhC
Confidence 6789999999986
No 12
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=5.9e-22 Score=199.25 Aligned_cols=229 Identities=14% Similarity=0.098 Sum_probs=160.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.++..+|..++++++.|... ++.|+||++||..+... . .+...++.|+++||+|+++|+||+|.+
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~----~~~P~Vli~gG~~~~~~--~----~~~~~~~~La~~Gy~vl~~D~pG~G~s 236 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGD----GPFPTVLVCGGLDSLQT--D----YYRLFRDYLAPRGIAMLTIDMPSVGFS 236 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCC----CCccEEEEeCCcccchh--h----hHHHHHHHHHhCCCEEEEECCCCCCCC
Confidence 5788999998888999999999742 57799887666433211 1 234457889999999999999999876
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---- 473 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---- 473 (571)
.... ..........++++++...+.+|.+||+++|||+||++++.++..+|++++++|+.+|+.+....
T Consensus 237 ~~~~-------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~ 309 (414)
T PRK05077 237 SKWK-------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKR 309 (414)
T ss_pred CCCC-------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhh
Confidence 4310 00001122357888998888899999999999999999999999889999999998887642110
Q ss_pred ----cchhhh---hhcCCCCCChhhhc----cCCcc--hh-hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 474 ----DTFYTE---KYMGLPSEDPVGYE----YSSVM--HH-VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 474 ----~~~~~~---~~~g~~~~~~~~~~----~~s~~--~~-~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
...+.. ..++.+..+.+.+. ..+.. .. ..++++|+|++||++|.++|++.++.+.+.. .+.+
T Consensus 310 ~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~~~~ 385 (414)
T PRK05077 310 QQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS----ADGK 385 (414)
T ss_pred hhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC----CCCe
Confidence 000110 11233222222111 11110 11 2568899999999999999999998776543 5678
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++++|++ |.+ +....+...+.+||.++|
T Consensus 386 l~~i~~~-~~~---e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 386 LLEIPFK-PVY---RNFDKALQEISDWLEDRL 413 (414)
T ss_pred EEEccCC-Ccc---CCHHHHHHHHHHHHHHHh
Confidence 8999997 433 467889999999999875
No 13
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=1.1e-21 Score=194.22 Aligned_cols=240 Identities=18% Similarity=0.217 Sum_probs=163.1
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
+.+...+...||.++++..+.|... + .+.|+||++||.+... .| .+...+..|+++||.|+++|+||+|.+
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~~--~-~~~~~VvllHG~~~~~----~~--~~~~~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSSS--S-PPRALIFMVHGYGNDI----SW--TFQSTAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCCC--C-CCceEEEEEcCCCCCc----ce--ehhHHHHHHHhCCCEEEEecCCCCCCC
Confidence 5566778888999999999988642 1 3568999999975432 12 233456778899999999999999877
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-c-c
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-D-T 475 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~-~ 475 (571)
..... ....-....+|+.++++++......+..+++|+||||||.+++.++.++|++++++|+.+|....... . .
T Consensus 102 ~~~~~---~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 102 EGLRA---YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CCccc---cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 53110 00000112678889999987754344568999999999999999999999999999999886542210 0 0
Q ss_pred h-------hhhhhcC----CCCC------------------ChhhhccCC--------------cchhhccCCCcEEEEe
Q 008274 476 F-------YTEKYMG----LPSE------------------DPVGYEYSS--------------VMHHVHKMKGKLLLVH 512 (571)
Q Consensus 476 ~-------~~~~~~g----~~~~------------------~~~~~~~~s--------------~~~~~~~~~~p~lli~ 512 (571)
. +..++.. .+.. ++..|.... ....+.++++|+||+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~ 258 (330)
T PLN02298 179 WPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLH 258 (330)
T ss_pred hHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEe
Confidence 0 0011110 0000 000010000 1123567889999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC--C-CcHHHHHHHHHHHHHHhC
Q 008274 513 GMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR--H-RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 513 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--~-~~~~~~~~~i~~fl~~~l 571 (571)
|++|.++|++.++.+++++.. .+.+++++++++|.+.. + ...+.+.+.+.+||++++
T Consensus 259 G~~D~ivp~~~~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 259 GSADVVTDPDVSRALYEEAKS--EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred cCCCCCCCHHHHHHHHHHhcc--CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999887642 35788899999999743 2 224668889999998764
No 14
>PLN02442 S-formylglutathione hydrolase
Probab=99.89 E-value=1.4e-21 Score=187.47 Aligned_cols=245 Identities=14% Similarity=0.147 Sum_probs=161.4
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
...+.+.+.++ -|..+.+.+|.|+.. ..+++|+|+++||.+++.. .|... ....+.++..|++|++||..++|
T Consensus 16 ~~~~~~~~~s~~l~~~~~~~vy~P~~~--~~~~~Pvv~~lHG~~~~~~---~~~~~-~~~~~~~~~~g~~Vv~pd~~~~g 89 (283)
T PLN02442 16 GFNRRYKHFSSTLGCSMTFSVYFPPAS--DSGKVPVLYWLSGLTCTDE---NFIQK-SGAQRAAAARGIALVAPDTSPRG 89 (283)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCcc--cCCCCCEEEEecCCCcChH---HHHHh-hhHHHHHhhcCeEEEecCCCCCC
Confidence 34555666653 467899999999842 3368999999999776542 33211 22346667889999999976543
Q ss_pred C--C----------hhh-hHHHHhccCCCCCchh-HHHH-HHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeE
Q 008274 396 R--R----------GLK-FEASIKHNCGRIDAED-QLTG-AEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQ 459 (571)
Q Consensus 396 ~--~----------~~~-~~~~~~~~~~~~~~~D-~~~~-~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~ 459 (571)
. . +.. +.......++.....+ +.+. ..++.+. ..+|.++++|+|+||||++++.++.++|++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~ 169 (283)
T PLN02442 90 LNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYK 169 (283)
T ss_pred CCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEE
Confidence 1 0 100 0001111111111111 2222 2223222 23588999999999999999999999999999
Q ss_pred EEEEcCccCCcccc--cchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChH-HHHHHHHHHHHcCC
Q 008274 460 CAVSGAPVTSWDGY--DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR-HTARLINALVAARK 536 (571)
Q Consensus 460 ~~v~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~~ 536 (571)
++++.+|+.++... .......+++.+....+.+...+++..+...++|+|++||++|..++.. ++..+++++++.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~ 249 (283)
T PLN02442 170 SVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGA 249 (283)
T ss_pred EEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCC
Confidence 99999998775321 1112234455544333444445555556667789999999999999974 58899999999999
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++++.++|+++|.+. ....+.++.++|..++
T Consensus 250 ~~~~~~~pg~~H~~~---~~~~~i~~~~~~~~~~ 280 (283)
T PLN02442 250 PVTLRLQPGYDHSYF---FIATFIDDHINHHAQA 280 (283)
T ss_pred CeEEEEeCCCCccHH---HHHHHHHHHHHHHHHH
Confidence 999999999999874 3445555556666654
No 15
>PHA02857 monoglyceride lipase; Provisional
Probab=99.88 E-value=1.4e-21 Score=188.58 Aligned_cols=226 Identities=17% Similarity=0.182 Sum_probs=155.8
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 325 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 325 ~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
...||..+.+.+|.|.+ .+.|+|+++||.+.+.. .|...++.|+++||.|+++|+||+|.+.....
T Consensus 6 ~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~~~-------~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-- 71 (276)
T PHA02857 6 FNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEHSG-------RYEELAENISSLGILVFSHDHIGHGRSNGEKM-- 71 (276)
T ss_pred ecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccccc-------hHHHHHHHHHhCCCEEEEccCCCCCCCCCccC--
Confidence 34589999999999853 35589999999765533 45667889999999999999999987753210
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc--cc----hhh
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--DT----FYT 478 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~--~~----~~~ 478 (571)
....+ ...++|+.+.++++.+.. ...+++++|||+||.+++.++.++|++++++|+.+|....... .. ...
T Consensus 72 ~~~~~-~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~ 148 (276)
T PHA02857 72 MIDDF-GVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLM 148 (276)
T ss_pred CcCCH-HHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHH
Confidence 00010 012566777777765542 3467999999999999999999999999999999987543210 00 000
Q ss_pred hhhc------------------------CCCCCC----hhhh-c-----cCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 479 EKYM------------------------GLPSED----PVGY-E-----YSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 479 ~~~~------------------------g~~~~~----~~~~-~-----~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
..+. ..+... ...+ . .......+.++++|+|+++|++|.++|+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~ 228 (276)
T PHA02857 149 GIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGA 228 (276)
T ss_pred HHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHH
Confidence 0000 000000 0000 0 0001123567889999999999999999999
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCCCC--CcHHHHHHHHHHHHHHh
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERT 570 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~ 570 (571)
..+.+.+ ..+.++.++++++|.+... +.++++++.+.+||+++
T Consensus 229 ~~l~~~~---~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 229 YYFMQHA---NCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHc---cCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9988876 2367999999999988544 33788999999999874
No 16
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.88 E-value=1e-20 Score=181.31 Aligned_cols=242 Identities=14% Similarity=0.129 Sum_probs=162.4
Q ss_pred CCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC--CCC
Q 008274 318 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--RGT 394 (571)
Q Consensus 318 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--rG~ 394 (571)
+.+.+++.+. .+.++.+.+|.|+... .+++|+|+++||.+.+.. .|... .....++++.||.|++||. ||+
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~~--~~~~P~vvllHG~~~~~~---~~~~~-~~~~~la~~~g~~Vv~Pd~~~~g~ 85 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQAA--AGPVPVLWYLSGLTCTHE---NFMIK-AGAQRFAAEHGLALVAPDTSPRGT 85 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCcc--CCCCCEEEEccCCCCCcc---HHHhh-hHHHHHHhhcCcEEEEeCCCCCcC
Confidence 4455666654 4677889999998642 256899999999876543 33111 1122444567999999997 665
Q ss_pred CCChh--hhH---------HHHhccCC-C-CCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 395 ARRGL--KFE---------ASIKHNCG-R-IDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 395 ~~~~~--~~~---------~~~~~~~~-~-~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
+.++. .|. ........ . .....+.+.+..+++. ..+|.++++|+|+||||++++.+++++|++|++
T Consensus 86 ~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~ 165 (275)
T TIGR02821 86 GIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKS 165 (275)
T ss_pred CCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceE
Confidence 53321 110 00000000 0 0122233444444443 447889999999999999999999999999999
Q ss_pred EEEcCccCCccccc--chhhhhhcCCCCCChhhhccCCcchhhcc--CCCcEEEEecCCCCCCCh-HHHHHHHHHHHHcC
Q 008274 461 AVSGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHK--MKGKLLLVHGMIDENVHF-RHTARLINALVAAR 535 (571)
Q Consensus 461 ~v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~s~~~~~~~--~~~p~lli~G~~D~~v~~-~~~~~~~~~l~~~~ 535 (571)
+++.+|+.+..... ......+++.+.. .+...++...+.+ ..+|+++.||+.|..++. .++..+.++|++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g 242 (275)
T TIGR02821 166 VSAFAPIVAPSRCPWGQKAFSAYLGADEA---AWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAG 242 (275)
T ss_pred EEEECCccCcccCcchHHHHHHHhccccc---chhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcC
Confidence 99999987654221 1122344444322 2334455554443 357999999999999998 68889999999999
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.++++.++|+++|++. .....++..++|+.+++
T Consensus 243 ~~v~~~~~~g~~H~f~---~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 243 QALTLRRQAGYDHSYY---FIASFIADHLRHHAERL 275 (275)
T ss_pred CCeEEEEeCCCCccch---hHHHhHHHHHHHHHhhC
Confidence 9999999999999984 35566778888888764
No 17
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.87 E-value=2.8e-21 Score=175.04 Aligned_cols=240 Identities=15% Similarity=0.151 Sum_probs=171.7
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
.......+.+.+|..+....|.|... .++..+|+++||...... ..+...+..|++.||.|+++|++|+|.
T Consensus 25 ~~~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG~g~~~s------~~~~~~a~~l~~~g~~v~a~D~~GhG~ 95 (313)
T KOG1455|consen 25 VTYSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHGYGEHSS------WRYQSTAKRLAKSGFAVYAIDYEGHGR 95 (313)
T ss_pred cceeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcCCcccch------hhHHHHHHHHHhCCCeEEEeeccCCCc
Confidence 34555677788999999999999653 156789999999655431 245667899999999999999999998
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc---
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--- 473 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~--- 473 (571)
+.+. .+...+ -...++|+...++.+..+..-..-..+++||||||.+++.++.++|..+.++|+.+|++-....
T Consensus 96 SdGl--~~yi~~-~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp 172 (313)
T KOG1455|consen 96 SDGL--HAYVPS-FDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKP 172 (313)
T ss_pred CCCC--cccCCc-HHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCC
Confidence 7531 111111 1223678888888877765445568999999999999999999999999999999997643210
Q ss_pred cc----------hhhhhhcCCCCC--------Chh--hhccCC----------------------cchhhccCCCcEEEE
Q 008274 474 DT----------FYTEKYMGLPSE--------DPV--GYEYSS----------------------VMHHVHKMKGKLLLV 511 (571)
Q Consensus 474 ~~----------~~~~~~~g~~~~--------~~~--~~~~~s----------------------~~~~~~~~~~p~lli 511 (571)
.. .+..++.-.|.. +++ .....+ ...++.++..|+|++
T Consensus 173 ~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflil 252 (313)
T KOG1455|consen 173 HPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLIL 252 (313)
T ss_pred CcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEE
Confidence 00 000001000100 000 011112 223466678899999
Q ss_pred ecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC---CCCcHHHHHHHHHHHHHHh
Q 008274 512 HGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR---RHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 512 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~ 570 (571)
||+.|.++.+..++.+++...+. +-++.+|||.-|.+. ..++.+.++..|.+||+++
T Consensus 253 HG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 253 HGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ecCCCcccCcHHHHHHHHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999999999999976554 557779999999974 5778999999999999875
No 18
>PRK10749 lysophospholipase L2; Provisional
Probab=99.87 E-value=2.8e-21 Score=190.71 Aligned_cols=239 Identities=18% Similarity=0.156 Sum_probs=159.7
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+...+...+|..+.+..+.|.. +.|+||++||..... ..|..++..++++||.|+++|+||+|.
T Consensus 28 ~~~~~~~~~~~~g~~l~~~~~~~~~------~~~~vll~HG~~~~~-------~~y~~~~~~l~~~g~~v~~~D~~G~G~ 94 (330)
T PRK10749 28 RQREEAEFTGVDDIPIRFVRFRAPH------HDRVVVICPGRIESY-------VKYAELAYDLFHLGYDVLIIDHRGQGR 94 (330)
T ss_pred hhccceEEEcCCCCEEEEEEccCCC------CCcEEEEECCccchH-------HHHHHHHHHHHHCCCeEEEEcCCCCCC
Confidence 4556677778899999999887642 236889999965432 134556778889999999999999998
Q ss_pred ChhhhHHHHhccCC--CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-
Q 008274 397 RGLKFEASIKHNCG--RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY- 473 (571)
Q Consensus 397 ~~~~~~~~~~~~~~--~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~- 473 (571)
+............. ....+|+.++++.+... .+..++.++||||||.+++.++.++|+.++++|+.+|.......
T Consensus 95 S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~ 172 (330)
T PRK10749 95 SGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL 172 (330)
T ss_pred CCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC
Confidence 76322110000000 01134555555555433 24578999999999999999999999999999999886432100
Q ss_pred cch-------hhhh--------------hcCCCC------CChh-------hhccC---------------------Ccc
Q 008274 474 DTF-------YTEK--------------YMGLPS------EDPV-------GYEYS---------------------SVM 498 (571)
Q Consensus 474 ~~~-------~~~~--------------~~g~~~------~~~~-------~~~~~---------------------s~~ 498 (571)
... +... +...+. ...+ .+... ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (330)
T PRK10749 173 PSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVL 252 (330)
T ss_pred CcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHH
Confidence 000 0000 000000 0000 01000 011
Q ss_pred hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC---CCeeEEEcCCCCCCCCCCCc--HHHHHHHHHHHHHHh
Q 008274 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR---KPYEILIFPDERHMPRRHRD--RIYMEERIWEFIERT 570 (571)
Q Consensus 499 ~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~fl~~~ 570 (571)
..+.+++.|+|++||++|.++++..+..+++.+.+++ .+.++++||+++|.+..... ++.+++.+.+||+++
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 2346678999999999999999999999999987765 35689999999999754333 788999999999875
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=4.6e-21 Score=190.92 Aligned_cols=237 Identities=14% Similarity=0.105 Sum_probs=157.1
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+...+...+|.++.+..+.|.+. ++.|+||++||.+.... . .+...+..|+++||.|+++|+||+|.+..
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~~~---~---~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 131 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDTCT---F---FFEGIARKIASSGYGVFAMDYPGFGLSEG 131 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCccc---h---HHHHHHHHHHhCCCEEEEecCCCCCCCCC
Confidence 34455567899999999998642 35689999999755421 1 23456778888999999999999987753
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc--cch-
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--DTF- 476 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~- 476 (571)
.... . .. -...++|+.+.++.+..+...+..+++|+||||||.+++.++.++|++++++|+.+|....... ...
T Consensus 132 ~~~~-~-~~-~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~ 208 (349)
T PLN02385 132 LHGY-I-PS-FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPL 208 (349)
T ss_pred CCCC-c-CC-HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchH
Confidence 1100 0 00 0112566777777776543345568999999999999999999999999999999886532100 000
Q ss_pred -----------------h-----hhhhcCCCCC------Chhhhc-------------c-CCcchhhccCCCcEEEEecC
Q 008274 477 -----------------Y-----TEKYMGLPSE------DPVGYE-------------Y-SSVMHHVHKMKGKLLLVHGM 514 (571)
Q Consensus 477 -----------------~-----~~~~~g~~~~------~~~~~~-------------~-~s~~~~~~~~~~p~lli~G~ 514 (571)
+ ...+...... +...+. . ......+.++++|+|++||+
T Consensus 209 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~ 288 (349)
T PLN02385 209 VLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGE 288 (349)
T ss_pred HHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 0 0000000000 000000 0 01112356788999999999
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC--Cc-HHHHHHHHHHHHHHhC
Q 008274 515 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH--RD-RIYMEERIWEFIERTL 571 (571)
Q Consensus 515 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~-~~~~~~~i~~fl~~~l 571 (571)
+|.++++..++.+++.+.. .+.+++++|+++|.+... +. ...+++.+.+||++++
T Consensus 289 ~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 289 ADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred CCCccChHHHHHHHHHcCC--CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 9999999999998887632 357888999999987422 22 4458899999999874
No 20
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=5.1e-20 Score=188.63 Aligned_cols=213 Identities=14% Similarity=0.112 Sum_probs=156.9
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|+|++...+. ..||++|+++|+.++++.
T Consensus 204 v~~p~wSpDG~~lay~s~~~g~---------------------------------~~i~~~dl~~g~~~~l~~------- 243 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYANGR---------------------------------PRVYLLDLETGQRELVGN------- 243 (435)
T ss_pred eEeeEECCCCCEEEEEEecCCC---------------------------------CEEEEEECCCCcEEEeec-------
Confidence 3468899999999998754222 268999999998877743
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.......+.|||||+.+++..+++ +..+||.+|+++++.++|+..... +..+ .|++|+ ++|.+
T Consensus 244 --~~g~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~d~~~~~~~~Lt~~~~~---~~~~---------~~spDG~~i~f~s 308 (435)
T PRK05137 244 --FPGMTFAPRFSPDGRKVVMSLSQG-GNTDIYTMDLRSGTTTRLTDSPAI---DTSP---------SYSPDGSQIVFES 308 (435)
T ss_pred --CCCcccCcEECCCCCEEEEEEecC-CCceEEEEECCCCceEEccCCCCc---cCce---------eEcCCCCEEEEEE
Confidence 233455789999999888877655 346899999999999888764321 1111 345554 88888
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
++.|..+||++++++++.++||.+......+ .|||||+.|+|.+...+ ..+|+.+++ ++. ..+.++.....
T Consensus 309 ~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~-~~SpdG~~ia~~~~~~~--~~~i~~~d~--~~~----~~~~lt~~~~~ 379 (435)
T PRK05137 309 DRSGSPQLYVMNADGSNPRRISFGGGRYSTP-VWSPRGDLIAFTKQGGG--QFSIGVMKP--DGS----GERILTSGFLV 379 (435)
T ss_pred CCCCCCeEEEEECCCCCeEEeecCCCcccCe-EECCCCCEEEEEEcCCC--ceEEEEEEC--CCC----ceEeccCCCCC
Confidence 8888899999999999999999764444444 49999999999986554 378999998 443 45667665444
Q ss_pred EEEEECCCCCEEEEEeeCCCCC--CEEEEEEcCCCceeEecc
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSP--PRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p--~~l~~~~~~~~~~~~~l~ 302 (571)
..++|||||+.++|........ ..||++++..+ ..+.+.
T Consensus 380 ~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~-~~~~l~ 420 (435)
T PRK05137 380 EGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGR-NEREVP 420 (435)
T ss_pred CCCeECCCCCEEEEEEccCCCCCcceEEEEECCCC-ceEEcc
Confidence 5669999999999988765543 58999998444 445553
No 21
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=6.6e-20 Score=184.29 Aligned_cols=209 Identities=8% Similarity=0.073 Sum_probs=154.2
Q ss_pred eEEECCCCCe-EEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 27 GYWWSLDSKF-IAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 27 ~~~wSPDg~~-iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
.+.|||||++ ++|++.+... .+||++|+++|+.++++.
T Consensus 192 ~p~wSpDG~~~i~y~s~~~~~---------------------------------~~Iyv~dl~tg~~~~lt~-------- 230 (419)
T PRK04043 192 FPKWANKEQTAFYYTSYGERK---------------------------------PTLYKYNLYTGKKEKIAS-------- 230 (419)
T ss_pred eEEECCCCCcEEEEEEccCCC---------------------------------CEEEEEECCCCcEEEEec--------
Confidence 6889999997 6665543211 268999999999988853
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
..+....+.|||||+.+++...+. ...+||++|+++|+.++|+.... .+..+ .|++|+ ++|.++
T Consensus 231 -~~g~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~dl~~g~~~~LT~~~~---~d~~p---------~~SPDG~~I~F~Sd 296 (419)
T PRK04043 231 -SQGMLVVSDVSKDGSKLLLTMAPK-GQPDIYLYDTNTKTLTQITNYPG---IDVNG---------NFVEDDKRIVFVSD 296 (419)
T ss_pred -CCCcEEeeEECCCCCEEEEEEccC-CCcEEEEEECCCCcEEEcccCCC---ccCcc---------EECCCCCEEEEEEC
Confidence 344555689999999888887665 45689999999999999976432 11111 344554 999999
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC----ceeEEEEEEeCCCCCCCCCCCeEecCC
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP----LESHLYCAKLYPDWNHTLEAPVKLTNG 259 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~----~~~~l~~~~l~~~g~~~~~~~~~lt~~ 259 (571)
+.|..+||++++++++.+++|..... .. .|||||+.|+|++...+. ...+||.+++ ++. ..++||..
T Consensus 297 r~g~~~Iy~~dl~~g~~~rlt~~g~~--~~-~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~--~~g----~~~~LT~~ 367 (419)
T PRK04043 297 RLGYPNIFMKKLNSGSVEQVVFHGKN--NS-SVSTYKNYIVYSSRETNNEFGKNTFNLYLIST--NSD----YIRRLTAN 367 (419)
T ss_pred CCCCceEEEEECCCCCeEeCccCCCc--Cc-eECCCCCEEEEEEcCCCcccCCCCcEEEEEEC--CCC----CeEECCCC
Confidence 99999999999999999899864221 12 599999999999976422 2378999998 444 67889876
Q ss_pred CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 260 KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.....++|||||+.++|.... ..-..|+++++ +|.....|
T Consensus 368 ~~~~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l-~g~~~~~l 407 (419)
T PRK04043 368 GVNQFPRFSSDGGSIMFIKYL-GNQSALGIIRL-NYNKSFLF 407 (419)
T ss_pred CCcCCeEECCCCCEEEEEEcc-CCcEEEEEEec-CCCeeEEe
Confidence 433457999999999998765 44457999998 45443444
No 22
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.86 E-value=4.3e-21 Score=177.84 Aligned_cols=204 Identities=21% Similarity=0.205 Sum_probs=142.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC---Ch-hhhHHHHh-
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR---RG-LKFEASIK- 406 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~---~~-~~~~~~~~- 406 (571)
+.+++..|.+. ++.|.||++|+..+.. .....+++.|+++||.|++||+-+... .. .+-.....
T Consensus 1 ~~ay~~~P~~~----~~~~~Vvv~~d~~G~~-------~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~ 69 (218)
T PF01738_consen 1 IDAYVARPEGG----GPRPAVVVIHDIFGLN-------PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRE 69 (218)
T ss_dssp EEEEEEEETTS----SSEEEEEEE-BTTBS--------HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHH
T ss_pred CeEEEEeCCCC----CCCCEEEEEcCCCCCc-------hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHH
Confidence 46889999863 5789999999965542 234456899999999999999765433 11 11111110
Q ss_pred --ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCC
Q 008274 407 --HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484 (571)
Q Consensus 407 --~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 484 (571)
.........|+.+++++|.+++.++..||+++|+|+||.+++.++.+. +.++++++..|...
T Consensus 70 ~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~--------------- 133 (218)
T PF01738_consen 70 LFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP--------------- 133 (218)
T ss_dssp CHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS---------------
T ss_pred HHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC---------------
Confidence 110112257788999999999878999999999999999999998876 67899888776100
Q ss_pred CCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC-------CcHH
Q 008274 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH-------RDRI 557 (571)
Q Consensus 485 ~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~-------~~~~ 557 (571)
...+.....++++|+|+++|++|+.++.+....+.++|++++.++++++||+++|+|... ...+
T Consensus 134 ---------~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~ 204 (218)
T PF01738_consen 134 ---------PPPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAE 204 (218)
T ss_dssp ---------GGGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHH
T ss_pred ---------CCcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHH
Confidence 011233467788999999999999999999999999999999999999999999998432 2457
Q ss_pred HHHHHHHHHHHHhC
Q 008274 558 YMEERIWEFIERTL 571 (571)
Q Consensus 558 ~~~~~i~~fl~~~l 571 (571)
+.++++++||+++|
T Consensus 205 ~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 205 DAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhcC
Confidence 78999999999987
No 23
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.84 E-value=9.1e-20 Score=181.83 Aligned_cols=234 Identities=18% Similarity=0.179 Sum_probs=160.0
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.....+...++..+.+..|.|... .+.|+||++||.+.... .|..++..|+++||.|+++|+||+|.+.
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~~-------~~~~~a~~L~~~Gy~V~~~D~rGhG~S~ 178 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHSG-------RYLHFAKQLTSCGFGVYAMDWIGHGGSD 178 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHHH-------HHHHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 456777888888999999998642 35689999999765432 3455788899999999999999998775
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC---eeEEEEEcCccCCcccccc
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VFQCAVSGAPVTSWDGYDT 475 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~~~~v~~~~~~~~~~~~~ 475 (571)
.... +........+|+.++++++..+. +..+++|+||||||.+++.++. +|+ +++++|+.+|.........
T Consensus 179 ~~~~---~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~ 252 (395)
T PLN02652 179 GLHG---YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP 252 (395)
T ss_pred CCCC---CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH
Confidence 4211 00000112567888888887642 3357999999999999987765 554 7899999988754321100
Q ss_pred h-------hh---hhh--cC-----CC-CCChhhh-c-cCC----------------------cchhhccCCCcEEEEec
Q 008274 476 F-------YT---EKY--MG-----LP-SEDPVGY-E-YSS----------------------VMHHVHKMKGKLLLVHG 513 (571)
Q Consensus 476 ~-------~~---~~~--~g-----~~-~~~~~~~-~-~~s----------------------~~~~~~~~~~p~lli~G 513 (571)
. +. ..+ .+ .+ ..+++.. . ..+ ....+.++++|+|++||
T Consensus 253 ~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G 332 (395)
T PLN02652 253 IVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHG 332 (395)
T ss_pred HHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEe
Confidence 0 00 000 00 00 0000000 0 000 11234667899999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 514 MIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 514 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++|.++|++.+..+++.+.. ...+++++|+++|.+......+.+++.+.+||++++
T Consensus 333 ~~D~vvp~~~a~~l~~~~~~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 333 TADRVTDPLASQDLYNEAAS--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred CCCCCCCHHHHHHHHHhcCC--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999887633 356788899999998666678999999999998764
No 24
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=3.3e-19 Score=181.51 Aligned_cols=211 Identities=18% Similarity=0.158 Sum_probs=153.4
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|||++..... ..|+++|+++|+.+.+..
T Consensus 202 ~~p~wSPDG~~la~~s~~~g~---------------------------------~~i~i~dl~~G~~~~l~~-------- 240 (429)
T PRK03629 202 MSPAWSPDGSKLAYVTFESGR---------------------------------SALVIQTLANGAVRQVAS-------- 240 (429)
T ss_pred eeeEEcCCCCEEEEEEecCCC---------------------------------cEEEEEECCCCCeEEccC--------
Confidence 468999999999998643221 368999999998877643
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.|++...+. ...+||++|+++|+.++|+..... ... +.|++|+ ++|.++
T Consensus 241 -~~~~~~~~~~SPDG~~La~~~~~~-g~~~I~~~d~~tg~~~~lt~~~~~---~~~---------~~wSPDG~~I~f~s~ 306 (429)
T PRK03629 241 -FPRHNGAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQIRQVTDGRSN---NTE---------PTWFPDSQNLAYTSD 306 (429)
T ss_pred -CCCCcCCeEECCCCCEEEEEEcCC-CCcEEEEEECCCCCEEEccCCCCC---cCc---------eEECCCCCEEEEEeC
Confidence 223345689999999999886654 344699999999998888754211 111 1345554 888898
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||.+++++++.++||........+ .|||||++|+|.+...+. .+||.+++ ++. ..++|+......
T Consensus 307 ~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~-~~SpDG~~Ia~~~~~~g~--~~I~~~dl--~~g----~~~~Lt~~~~~~ 377 (429)
T PRK03629 307 QAGRPQVYKVNINGGAPQRITWEGSQNQDA-DVSSDGKFMVMVSSNGGQ--QHIAKQDL--ATG----GVQVLTDTFLDE 377 (429)
T ss_pred CCCCceEEEEECCCCCeEEeecCCCCccCE-EECCCCCEEEEEEccCCC--ceEEEEEC--CCC----CeEEeCCCCCCC
Confidence 888899999999998888898654333333 599999999999877654 68999998 443 567788543334
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.++|||||+.++|..... ....++++++ +|+..+.|.
T Consensus 378 ~p~~SpDG~~i~~~s~~~-~~~~l~~~~~-~G~~~~~l~ 414 (429)
T PRK03629 378 TPSIAPNGTMVIYSSSQG-MGSVLNLVST-DGRFKARLP 414 (429)
T ss_pred CceECCCCCEEEEEEcCC-CceEEEEEEC-CCCCeEECc
Confidence 579999999999987643 3456888887 566555554
No 25
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=4e-19 Score=181.53 Aligned_cols=211 Identities=14% Similarity=0.088 Sum_probs=152.7
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++..++. .+||++|+++++.+.++.
T Consensus 221 ~~p~wSPDG~~La~~s~~~g~---------------------------------~~L~~~dl~tg~~~~lt~-------- 259 (448)
T PRK04792 221 MSPAWSPDGRKLAYVSFENRK---------------------------------AEIFVQDIYTQVREKVTS-------- 259 (448)
T ss_pred cCceECCCCCEEEEEEecCCC---------------------------------cEEEEEECCCCCeEEecC--------
Confidence 368999999999998754221 368999999998877743
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.+++..+.+ ...+||++|+++|+.++|+..... +..+ .|++|+ ++|.++
T Consensus 260 -~~g~~~~~~wSPDG~~La~~~~~~-g~~~Iy~~dl~tg~~~~lt~~~~~---~~~p---------~wSpDG~~I~f~s~ 325 (448)
T PRK04792 260 -FPGINGAPRFSPDGKKLALVLSKD-GQPEIYVVDIATKALTRITRHRAI---DTEP---------SWHPDGKSLIFTSE 325 (448)
T ss_pred -CCCCcCCeeECCCCCEEEEEEeCC-CCeEEEEEECCCCCeEECccCCCC---ccce---------EECCCCCEEEEEEC
Confidence 223334689999999888876665 356899999999998888763211 1111 344554 788888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||++++++++.++||........+ .|+|||++|+|++...+ ..+||.+++ ++. ..+.|+......
T Consensus 326 ~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~-~~SpDG~~l~~~~~~~g--~~~I~~~dl--~~g----~~~~lt~~~~d~ 396 (448)
T PRK04792 326 RGGKPQIYRVNLASGKVSRLTFEGEQNLGG-SITPDGRSMIMVNRTNG--KFNIARQDL--ETG----AMQVLTSTRLDE 396 (448)
T ss_pred CCCCceEEEEECCCCCEEEEecCCCCCcCe-eECCCCCEEEEEEecCC--ceEEEEEEC--CCC----CeEEccCCCCCC
Confidence 888899999999998888898533222233 59999999999887654 378999998 443 566777653333
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.++++|||+.++|..... ....+++++. +|+..+.+.
T Consensus 397 ~ps~spdG~~I~~~~~~~-g~~~l~~~~~-~G~~~~~l~ 433 (448)
T PRK04792 397 SPSVAPNGTMVIYSTTYQ-GKQVLAAVSI-DGRFKARLP 433 (448)
T ss_pred CceECCCCCEEEEEEecC-CceEEEEEEC-CCCceEECc
Confidence 568999999999987654 3457888887 566555553
No 26
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.83 E-value=8e-20 Score=157.17 Aligned_cols=202 Identities=19% Similarity=0.235 Sum_probs=153.8
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
-.|+++||..++.. ..+.++++|.++||.|.+|.|||+|.....+......+| .+|+.++.++|.++++
T Consensus 16 ~AVLllHGFTGt~~-------Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy 84 (243)
T COG1647 16 RAVLLLHGFTGTPR-------DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY 84 (243)
T ss_pred EEEEEEeccCCCcH-------HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC
Confidence 67888999777643 356689999999999999999999999989988888888 8999999999998764
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---cccc-cc--hhhhhhcCCCCCCh----hhhccCC---
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGY-DT--FYTEKYMGLPSEDP----VGYEYSS--- 496 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---~~~~-~~--~~~~~~~g~~~~~~----~~~~~~s--- 496 (571)
+.|.++|.||||.+++.++.++| .+++|..++... |... .. .|.+++......+. +.++...
T Consensus 85 ---~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~ 159 (243)
T COG1647 85 ---DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTP 159 (243)
T ss_pred ---CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcch
Confidence 57999999999999999999988 466666554443 2110 00 01111111111111 1122221
Q ss_pred -------------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 497 -------------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 497 -------------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
....++.|..|++++.|.+|+.||.+.+..+++.+.. .+.++..|+++||-+.....++.+.+.+
T Consensus 160 ~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--~~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 160 MTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES--DDKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC--CcceeEEEccCCceeecchhHHHHHHHH
Confidence 2234667888999999999999999999999998754 4678889999999998889999999999
Q ss_pred HHHHHH
Q 008274 564 WEFIER 569 (571)
Q Consensus 564 ~~fl~~ 569 (571)
..||+.
T Consensus 238 ~~FL~~ 243 (243)
T COG1647 238 ITFLEK 243 (243)
T ss_pred HHHhhC
Confidence 999973
No 27
>PRK10162 acetyl esterase; Provisional
Probab=99.83 E-value=6.6e-19 Score=171.98 Aligned_cols=228 Identities=16% Similarity=0.146 Sum_probs=158.2
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~ 397 (571)
.+.+.++..+| .+.+.+|.|.. ...|+||++|||+........ +...+..|+. .|+.|+++|||.....
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~-----~~~p~vv~~HGGg~~~g~~~~----~~~~~~~la~~~g~~Vv~vdYrlape~ 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP-----DSQATLFYLHGGGFILGNLDT----HDRIMRLLASYSGCTVIGIDYTLSPEA 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC-----CCCCEEEEEeCCcccCCCchh----hhHHHHHHHHHcCCEEEEecCCCCCCC
Confidence 56778887777 59999999964 245999999999865432222 2335667775 6999999999976532
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC------CCeeEEEEEcCccC
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF------PDVFQCAVSGAPVT 468 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~------~~~~~~~v~~~~~~ 468 (571)
. ....++|+.++++|+.++ ..+|.+||+|+|+|+||.+++.++.+. +..++++++.+|+.
T Consensus 127 ~-----------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 127 R-----------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred C-----------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 1 112378999999998764 347889999999999999999888642 35688899998887
Q ss_pred Ccccccc-----------------hhhhhhcCCCCCChhhhccCCcch-hhccCCCcEEEEecCCCCCCChHHHHHHHHH
Q 008274 469 SWDGYDT-----------------FYTEKYMGLPSEDPVGYEYSSVMH-HVHKMKGKLLLVHGMIDENVHFRHTARLINA 530 (571)
Q Consensus 469 ~~~~~~~-----------------~~~~~~~g~~~~~~~~~~~~s~~~-~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~ 530 (571)
+...... ++...|++.+.+ ... ...+|.. .+..--.|++|++|+.|..++ ++..+.++
T Consensus 196 ~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~-~~~-p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~ 271 (318)
T PRK10162 196 GLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDAD-RES-PYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQT 271 (318)
T ss_pred CCCCChhHHHhCCCccccCHHHHHHHHHHhCCCccc-cCC-cccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHH
Confidence 6532110 011112221111 000 0112221 111223699999999999864 89999999
Q ss_pred HHHcCCCeeEEEcCCCCCCCCCC----CcHHHHHHHHHHHHHHhC
Q 008274 531 LVAARKPYEILIFPDERHMPRRH----RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 531 l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~~l 571 (571)
|+++|++++++++++..|+|... +......+.+.+||.++|
T Consensus 272 L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 272 LAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred HHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998422 345677888999998764
No 28
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.83 E-value=8.1e-19 Score=178.87 Aligned_cols=210 Identities=14% Similarity=0.126 Sum_probs=152.6
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++..... .+||++|+++|+.++++.
T Consensus 199 ~~p~wSPDG~~la~~s~~~~~---------------------------------~~I~~~dl~~g~~~~l~~-------- 237 (427)
T PRK02889 199 ISPAWSPDGTKLAYVSFESKK---------------------------------PVVYVHDLATGRRRVVAN-------- 237 (427)
T ss_pred ccceEcCCCCEEEEEEccCCC---------------------------------cEEEEEECCCCCEEEeec--------
Confidence 468899999999997653221 268999999998877742
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.+++..++++ ..+||.+|+++++.++|+..... +..+ .|++|+ ++|.++
T Consensus 238 -~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~d~~~~~~~~lt~~~~~---~~~~---------~wSpDG~~l~f~s~ 303 (427)
T PRK02889 238 -FKGSNSAPAWSPDGRTLAVALSRDG-NSQIYTVNADGSGLRRLTQSSGI---DTEP---------FFSPDGRSIYFTSD 303 (427)
T ss_pred -CCCCccceEECCCCCEEEEEEccCC-CceEEEEECCCCCcEECCCCCCC---CcCe---------EEcCCCCEEEEEec
Confidence 2334457899999999888766653 46899999999988877653211 1111 345554 888888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||.+++++++.+++|...-....+ .|||||++|+|.+...+. .+|+.+++ .+. ..++++......
T Consensus 304 ~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~-~~SpDG~~Ia~~s~~~g~--~~I~v~d~--~~g----~~~~lt~~~~~~ 374 (427)
T PRK02889 304 RGGAPQIYRMPASGGAAQRVTFTGSYNTSP-RISPDGKLLAYISRVGGA--FKLYVQDL--ATG----QVTALTDTTRDE 374 (427)
T ss_pred CCCCcEEEEEECCCCceEEEecCCCCcCce-EECCCCCEEEEEEccCCc--EEEEEEEC--CCC----CeEEccCCCCcc
Confidence 888899999999888888887542112233 599999999999876653 68999998 433 566777654445
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.++|+|||+.++|....... ..++++++ +++..+.+
T Consensus 375 ~p~~spdg~~l~~~~~~~g~-~~l~~~~~-~g~~~~~l 410 (427)
T PRK02889 375 SPSFAPNGRYILYATQQGGR-SVLAAVSS-DGRIKQRL 410 (427)
T ss_pred CceECCCCCEEEEEEecCCC-EEEEEEEC-CCCceEEe
Confidence 67999999999998876543 57888887 56554444
No 29
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=5.4e-19 Score=163.20 Aligned_cols=214 Identities=21% Similarity=0.153 Sum_probs=163.6
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+.+.++.++ .++.+++..|... .+.|+||++|+-.+... .....++.|++.||.|++||+-+..+...
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~----~~~P~VIv~hei~Gl~~-------~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~ 70 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA----GGFPGVIVLHEIFGLNP-------HIRDVARRLAKAGYVVLAPDLYGRQGDPT 70 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC----CCCCEEEEEecccCCch-------HHHHHHHHHHhCCcEEEechhhccCCCCC
Confidence 457778766 7899999999874 34499999999555422 34557899999999999999765322111
Q ss_pred hh------HHHH--hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 400 KF------EASI--KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 400 ~~------~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
.. .... ..........|+.+++++|..++.++..+|+++|+|+||.+++.++.+.| .++++++..|...-
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~- 148 (236)
T COG0412 71 DIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA- 148 (236)
T ss_pred cccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-
Confidence 11 1110 00111234689999999999998889999999999999999999999766 77998887654210
Q ss_pred cccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
. ......++++|+|+.+|+.|..+|......+.+++...++.+++.+|+++.|+|.
T Consensus 149 ---------------~---------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 149 ---------------D---------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred ---------------C---------cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 0 0112568899999999999999999999999999999988999999999999996
Q ss_pred CCC----------cHHHHHHHHHHHHHHhC
Q 008274 552 RHR----------DRIYMEERIWEFIERTL 571 (571)
Q Consensus 552 ~~~----------~~~~~~~~i~~fl~~~l 571 (571)
... ...+.++++++||+++|
T Consensus 205 ~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 205 NDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred cCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 431 25678899999999875
No 30
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.83 E-value=1.1e-18 Score=179.12 Aligned_cols=210 Identities=17% Similarity=0.164 Sum_probs=152.0
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++.+... .+||++|+++|+.+++..
T Consensus 202 ~~p~wSpDG~~la~~s~~~~~---------------------------------~~l~~~~l~~g~~~~l~~-------- 240 (430)
T PRK00178 202 LSPRWSPDGKRIAYVSFEQKR---------------------------------PRIFVQNLDTGRREQITN-------- 240 (430)
T ss_pred eeeeECCCCCEEEEEEcCCCC---------------------------------CEEEEEECCCCCEEEccC--------
Confidence 467899999999998754221 268999999998887743
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC--eEEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG--GFIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d--~~~~~s~ 183 (571)
.......+.|||||+.+++..++.+ ..+||++|+++++.++|+..... ...+ .|++| .++|.++
T Consensus 241 -~~g~~~~~~~SpDG~~la~~~~~~g-~~~Iy~~d~~~~~~~~lt~~~~~---~~~~---------~~spDg~~i~f~s~ 306 (430)
T PRK00178 241 -FEGLNGAPAWSPDGSKLAFVLSKDG-NPEIYVMDLASRQLSRVTNHPAI---DTEP---------FWGKDGRTLYFTSD 306 (430)
T ss_pred -CCCCcCCeEECCCCCEEEEEEccCC-CceEEEEECCCCCeEEcccCCCC---cCCe---------EECCCCCEEEEEEC
Confidence 2334456899999999988776653 46899999999998888653211 1111 34444 4888898
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||++++.+++.++||....... .+.|||||+.|+|.+...+ ..+|+.+++ .+. ..++|+......
T Consensus 307 ~~g~~~iy~~d~~~g~~~~lt~~~~~~~-~~~~Spdg~~i~~~~~~~~--~~~l~~~dl--~tg----~~~~lt~~~~~~ 377 (430)
T PRK00178 307 RGGKPQIYKVNVNGGRAERVTFVGNYNA-RPRLSADGKTLVMVHRQDG--NFHVAAQDL--QRG----SVRILTDTSLDE 377 (430)
T ss_pred CCCCceEEEEECCCCCEEEeecCCCCcc-ceEECCCCCEEEEEEccCC--ceEEEEEEC--CCC----CEEEccCCCCCC
Confidence 8899999999999988888885432222 2359999999999987665 367999998 443 567788654334
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.+++||||+.++|....... ..|+++++ ++...+.+
T Consensus 378 ~p~~spdg~~i~~~~~~~g~-~~l~~~~~-~g~~~~~l 413 (430)
T PRK00178 378 SPSVAPNGTMLIYATRQQGR-GVLMLVSI-NGRVRLPL 413 (430)
T ss_pred CceECCCCCEEEEEEecCCc-eEEEEEEC-CCCceEEC
Confidence 56899999999998765433 47888887 44443344
No 31
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.83 E-value=1.7e-18 Score=175.53 Aligned_cols=213 Identities=13% Similarity=0.085 Sum_probs=149.1
Q ss_pred ceEEECCCCCe--EEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 26 TGYWWSLDSKF--IAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 26 ~~~~wSPDg~~--iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+.|||||++ ++|++...+. .+||+.++++|+.++++.
T Consensus 188 ~sP~wSPDG~~~~~~y~S~~~g~---------------------------------~~I~~~~l~~g~~~~lt~------ 228 (428)
T PRK01029 188 ITPTWMHIGSGFPYLYVSYKLGV---------------------------------PKIFLGSLENPAGKKILA------ 228 (428)
T ss_pred ccceEccCCCceEEEEEEccCCC---------------------------------ceEEEEECCCCCceEeec------
Confidence 46899999998 5556654322 368999999999888854
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEE--ECCC---CceEEEEEeecCCeeeccCCcccCCCCCccCCCe-
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKF--DIKT---GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG- 177 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~--d~~~---g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~- 177 (571)
.......+.|||||+.|++++++.. ..+||.. |+++ |+.++|+..... . .. .+.|++|+
T Consensus 229 ---~~g~~~~p~wSPDG~~Laf~s~~~g-~~di~~~~~~~~~g~~g~~~~lt~~~~~-~-~~---------~p~wSPDG~ 293 (428)
T PRK01029 229 ---LQGNQLMPTFSPRKKLLAFISDRYG-NPDLFIQSFSLETGAIGKPRRLLNEAFG-T-QG---------NPSFSPDGT 293 (428)
T ss_pred ---CCCCccceEECCCCCEEEEEECCCC-CcceeEEEeecccCCCCcceEeecCCCC-C-cC---------CeEECCCCC
Confidence 2334456899999999999887653 2356664 5554 466677653211 0 00 11455664
Q ss_pred -EEEEEecCCccEEEEEeCC--CceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 178 -FIWASEKTGFRHLYLHDIN--GTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 178 -~~~~s~~~g~~~l~~~~~~--~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
++|.++++|..+||+++++ ++..++||........+ .|||||+.|+|.+...+. .+|+.+++ .+. +.+
T Consensus 294 ~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p-~wSPDG~~Laf~~~~~g~--~~I~v~dl--~~g----~~~ 364 (428)
T PRK01029 294 RLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCP-AWSPDGKKIAFCSVIKGV--RQICVYDL--ATG----RDY 364 (428)
T ss_pred EEEEEECCCCCceEEEEECcccccceEEeccCCCCccce-eECCCCCEEEEEEcCCCC--cEEEEEEC--CCC----CeE
Confidence 8888888898999999875 35578888764334444 499999999999887653 78999998 444 667
Q ss_pred EecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 255 KLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 255 ~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
+|+... ....++|||||+.++|..... ....||++++.+++ .+.|+.
T Consensus 365 ~Lt~~~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl~~g~-~~~Lt~ 412 (428)
T PRK01029 365 QLTTSPENKESPSWAIDSLHLVYSAGNS-NESELYLISLITKK-TRKIVI 412 (428)
T ss_pred EccCCCCCccceEECCCCCEEEEEECCC-CCceEEEEECCCCC-EEEeec
Confidence 888654 234569999999999987653 44689999986555 455543
No 32
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.82 E-value=5.7e-19 Score=169.35 Aligned_cols=232 Identities=22% Similarity=0.228 Sum_probs=159.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
...+-.+...||..+....+.+... +..+||++||..... ..|..++..|..+||.|+++|.||+|.+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~-------~ry~~la~~l~~~G~~V~~~D~RGhG~S 75 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEP-----PKGVVVLVHGLGEHS-------GRYEELADDLAARGFDVYALDLRGHGRS 75 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCC-----CCcEEEEecCchHHH-------HHHHHHHHHHHhCCCEEEEecCCCCCCC
Confidence 3455677778999999999988752 338999999975553 3566789999999999999999999988
Q ss_pred hh--hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---
Q 008274 398 GL--KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--- 472 (571)
Q Consensus 398 ~~--~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--- 472 (571)
.. ......... -..|+.+.++.+... ....+++|+||||||.+++.++.+++..++++|+.+|+.....
T Consensus 76 ~r~~rg~~~~f~~----~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~ 149 (298)
T COG2267 76 PRGQRGHVDSFAD----YVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAIL 149 (298)
T ss_pred CCCCcCCchhHHH----HHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHH
Confidence 53 111111111 134444444444432 1346899999999999999999999999999999999876542
Q ss_pred ccc-----------hhhhhhcCC----------CCCCh---hhhccCCc-----------------------chhhccCC
Q 008274 473 YDT-----------FYTEKYMGL----------PSEDP---VGYEYSSV-----------------------MHHVHKMK 505 (571)
Q Consensus 473 ~~~-----------~~~~~~~g~----------~~~~~---~~~~~~s~-----------------------~~~~~~~~ 505 (571)
... ......... ...++ +.|. .+| .....+++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~-~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~ 228 (298)
T COG2267 150 RLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYE-ADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIA 228 (298)
T ss_pred HHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHh-cCCccccCCccHHHHHHHHHhhcccchhcccccc
Confidence 000 000000000 00000 0111 111 11244567
Q ss_pred CcEEEEecCCCCCCC-hHHHHHHHHHHHHcCC-CeeEEEcCCCCCCCCCCCcH--HHHHHHHHHHHHHhC
Q 008274 506 GKLLLVHGMIDENVH-FRHTARLINALVAARK-PYEILIFPDERHMPRRHRDR--IYMEERIWEFIERTL 571 (571)
Q Consensus 506 ~p~lli~G~~D~~v~-~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~fl~~~l 571 (571)
.|+||++|++|.+++ .+...++++++ +. +.++++++++.|.+....+. +.+++.+.+||.+++
T Consensus 229 ~PvLll~g~~D~vv~~~~~~~~~~~~~---~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 229 LPVLLLQGGDDRVVDNVEGLARFFERA---GSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred CCEEEEecCCCccccCcHHHHHHHHhc---CCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 899999999999999 67777766655 43 47999999999998766666 899999999998763
No 33
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.81 E-value=3.5e-18 Score=174.88 Aligned_cols=211 Identities=15% Similarity=0.094 Sum_probs=152.9
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++..... .+|+++|+++++.++++.
T Consensus 207 ~~p~wSpDg~~la~~s~~~~~---------------------------------~~l~~~dl~~g~~~~l~~-------- 245 (433)
T PRK04922 207 LSPAWSPDGKKLAYVSFERGR---------------------------------SAIYVQDLATGQRELVAS-------- 245 (433)
T ss_pred ccccCCCCCCEEEEEecCCCC---------------------------------cEEEEEECCCCCEEEecc--------
Confidence 467899999999998643221 268999999998877743
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.+++...+.+ ..+||++|+++|+.++|+..... +..+ .|++|+ ++|.++
T Consensus 246 -~~g~~~~~~~SpDG~~l~~~~s~~g-~~~Iy~~d~~~g~~~~lt~~~~~---~~~~---------~~spDG~~l~f~sd 311 (433)
T PRK04922 246 -FRGINGAPSFSPDGRRLALTLSRDG-NPEIYVMDLGSRQLTRLTNHFGI---DTEP---------TWAPDGKSIYFTSD 311 (433)
T ss_pred -CCCCccCceECCCCCEEEEEEeCCC-CceEEEEECCCCCeEECccCCCC---ccce---------EECCCCCEEEEEEC
Confidence 2334456899999998888766653 45899999999998888653211 1111 344544 888888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||.+++++++.++||........+ .|||||++|+|.+...+ ..+|+.+++ .+. ..++|+......
T Consensus 312 ~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~-~~SpDG~~Ia~~~~~~~--~~~I~v~d~--~~g----~~~~Lt~~~~~~ 382 (433)
T PRK04922 312 RGGRPQIYRVAASGGSAERLTFQGNYNARA-SVSPDGKKIAMVHGSGG--QYRIAVMDL--STG----SVRTLTPGSLDE 382 (433)
T ss_pred CCCCceEEEEECCCCCeEEeecCCCCccCE-EECCCCCEEEEEECCCC--ceeEEEEEC--CCC----CeEECCCCCCCC
Confidence 888899999999888888888643222233 59999999999987544 368999998 443 566888654444
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.+.+||||++++|..... .-..||++++ ++...+.+.
T Consensus 383 ~p~~spdG~~i~~~s~~~-g~~~L~~~~~-~g~~~~~l~ 419 (433)
T PRK04922 383 SPSFAPNGSMVLYATREG-GRGVLAAVST-DGRVRQRLV 419 (433)
T ss_pred CceECCCCCEEEEEEecC-CceEEEEEEC-CCCceEEcc
Confidence 569999999999987653 3458999988 455455554
No 34
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.80 E-value=3.8e-19 Score=171.26 Aligned_cols=234 Identities=20% Similarity=0.263 Sum_probs=150.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
....++|.+.+|..|+++++.|... .++.|+||.+||.++... . +. ....++.+||+|+.+|.||.++.
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~~---~~~~Pavv~~hGyg~~~~---~----~~-~~~~~a~~G~~vl~~d~rGqg~~ 123 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKNA---KGKLPAVVQFHGYGGRSG---D----PF-DLLPWAAAGYAVLAMDVRGQGGR 123 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-S---SSSEEEEEEE--TT--GG---G----HH-HHHHHHHTT-EEEEE--TTTSSS
T ss_pred EEEEEEEEccCCCEEEEEEEecCCC---CCCcCEEEEecCCCCCCC---C----cc-cccccccCCeEEEEecCCCCCCC
Confidence 4567899999999999999999843 278999999999765422 1 11 12357899999999999998854
Q ss_pred hhhhHHH------HhccCCCC----------CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 398 GLKFEAS------IKHNCGRI----------DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 398 ~~~~~~~------~~~~~~~~----------~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
..+.... .+...|.. .+.|+..+++++.+++.+|.+||++.|.|+||.+++.+++..+ +++++
T Consensus 124 ~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~ 202 (320)
T PF05448_consen 124 SPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAA 202 (320)
T ss_dssp S-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEE
T ss_pred CCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEE
Confidence 3221110 00001111 2578999999999999999999999999999999999999765 57888
Q ss_pred EEcCccC-Ccccc----c--chhhh--hhcC----CCCCChh---hhccCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 462 VSGAPVT-SWDGY----D--TFYTE--KYMG----LPSEDPV---GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 462 v~~~~~~-~~~~~----~--~~~~~--~~~g----~~~~~~~---~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
++..|.. |+... . ..|.+ +|+. .+....+ ...-.+..+.+.+|++|+++..|-.|.+||+....
T Consensus 203 ~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~f 282 (320)
T PF05448_consen 203 AADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQF 282 (320)
T ss_dssp EEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHH
T ss_pred EecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHH
Confidence 8877754 43211 0 11111 1211 1111111 22335677789999999999999999999999999
Q ss_pred HHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 526 RLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..++++ ..+.++.+||..+|... .....++.++||.+|
T Consensus 283 A~yN~i---~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 283 AAYNAI---PGPKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHCC-----SSEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred HHHhcc---CCCeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 999888 45689999999999752 222367789999875
No 35
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.80 E-value=7.8e-19 Score=161.66 Aligned_cols=193 Identities=13% Similarity=0.085 Sum_probs=124.8
Q ss_pred EEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh--HHHHhccCCC
Q 008274 334 GALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF--EASIKHNCGR 411 (571)
Q Consensus 334 ~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~--~~~~~~~~~~ 411 (571)
+++|.|++. .+++|+||++||+++... .+...+ .+...+.+.||+|++||+||++..+..+ ........+.
T Consensus 1 ~~ly~P~~~---~~~~P~vv~lHG~~~~~~---~~~~~~-~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~ 73 (212)
T TIGR01840 1 MYVYVPAGL---TGPRALVLALHGCGQTAS---AYVIDW-GWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGT 73 (212)
T ss_pred CEEEcCCCC---CCCCCEEEEeCCCCCCHH---HHhhhc-ChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCC
Confidence 368889774 257899999999876533 111111 1345566789999999999986543322 1111112233
Q ss_pred CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhh
Q 008274 412 IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG 491 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 491 (571)
.+..|+..+++++.++..+|.+||+|+|+|+||++++.+++++|++|++++..++..........-....+ .+......
T Consensus 74 ~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 152 (212)
T TIGR01840 74 GEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM-CTAATAAS 152 (212)
T ss_pred ccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc-CCCCCHHH
Confidence 45778889999999887789999999999999999999999999999999888775421100000000000 00011111
Q ss_pred hccC-Cc-chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 492 YEYS-SV-MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 492 ~~~~-s~-~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
+.+. .. .........|++|+||++|.+||++.++.++++|++.
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 153 VCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 1000 00 0111222346789999999999999999999999876
No 36
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.80 E-value=2.3e-18 Score=153.31 Aligned_cols=217 Identities=20% Similarity=0.156 Sum_probs=157.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~ 396 (571)
..+.+..++..|..+.+..+.|+. ...++|++.||...+.. ++..+...|. ..++.|+.+||+|.|.
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~-----~~~~~lly~hGNa~Dlg-------q~~~~~~~l~~~ln~nv~~~DYSGyG~ 101 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE-----AAHPTLLYSHGNAADLG-------QMVELFKELSIFLNCNVVSYDYSGYGR 101 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc-----ccceEEEEcCCcccchH-------HHHHHHHHHhhcccceEEEEecccccc
Confidence 567778888888888888888875 24589999999744322 1211222332 3699999999999988
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+++..... ...+|+.++.++|.+... ..++|+|+|+|+|...++.+|++.| .+++|+.+|+.+.......
T Consensus 102 S~G~psE~-------n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~ 171 (258)
T KOG1552|consen 102 SSGKPSER-------NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFP 171 (258)
T ss_pred cCCCcccc-------cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhcc
Confidence 76543221 348999999999999865 7789999999999999999999988 7999999999874321100
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
... ....+..+..+..+..+++|+|++||+.|+++++.++.+++++.+. +++.....++||.- .+..
T Consensus 172 -------~~~-~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~--~~~~ 238 (258)
T KOG1552|consen 172 -------DTK-TTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHND--IELY 238 (258)
T ss_pred -------Ccc-eEEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCcc--cccC
Confidence 000 0011222333567788889999999999999999999999998744 46777888999974 2233
Q ss_pred HHHHHHHHHHHHH
Q 008274 557 IYMEERIWEFIER 569 (571)
Q Consensus 557 ~~~~~~i~~fl~~ 569 (571)
..+.+.+.+|+..
T Consensus 239 ~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 239 PEYIEHLRRFISS 251 (258)
T ss_pred HHHHHHHHHHHHH
Confidence 4556666666654
No 37
>PRK11460 putative hydrolase; Provisional
Probab=99.78 E-value=9.4e-18 Score=156.00 Aligned_cols=185 Identities=13% Similarity=0.100 Sum_probs=127.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC----ChhhhHHHHhccCCCCC-------ch
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR----RGLKFEASIKHNCGRID-------AE 415 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~----~~~~~~~~~~~~~~~~~-------~~ 415 (571)
++.|+||++||.+++.. .+...+..|...++.+..+.++|... .+..|.... ....... ..
T Consensus 14 ~~~~~vIlLHG~G~~~~-------~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~ 85 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-------AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMP 85 (232)
T ss_pred CCCcEEEEEeCCCCChH-------HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHH
Confidence 45689999999777643 23456778887775555555555321 122222110 0000011 22
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccC
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYS 495 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 495 (571)
.+.+.++++.++..++.++|+++|+|+||.+++.++.++|+.++++++.++... ..+.
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-------------~~~~--------- 143 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-------------SLPE--------- 143 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc-------------cccc---------
Confidence 344556666666667889999999999999999999889998888877665321 0000
Q ss_pred CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 496 SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 496 s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
....++|+|++||++|.+||++.+.++.++|++.+.++++++||+++|.+. .+..+.+.+||.+.|
T Consensus 144 -----~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~-----~~~~~~~~~~l~~~l 209 (232)
T PRK11460 144 -----TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID-----PRLMQFALDRLRYTV 209 (232)
T ss_pred -----cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC-----HHHHHHHHHHHHHHc
Confidence 112368999999999999999999999999999999999999999999983 244556667776543
No 38
>PRK10985 putative hydrolase; Provisional
Probab=99.77 E-value=2e-17 Score=162.63 Aligned_cols=235 Identities=16% Similarity=0.143 Sum_probs=149.2
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...++.+||..+...+...+. .+.+.|+||++||.+++.. ......++..|+++||.|+++|+||+|++
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~-----~~~~~~~~~~l~~~G~~v~~~d~rG~g~~ 101 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFN-----SPYAHGLLEAAQKRGWLGVVMHFRGCSGE 101 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCC
Confidence 344555778888776554322111 1235689999999766532 11223457888999999999999999865
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCe--eEEEEEcCccCCccc---
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV--FQCAVSGAPVTSWDG--- 472 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~--~~~~v~~~~~~~~~~--- 472 (571)
...... .......+|+.++++++.++. ...+++++||||||.+++.+++++++. +.++++.++..++..
T Consensus 102 ~~~~~~----~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~ 175 (324)
T PRK10985 102 PNRLHR----IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY 175 (324)
T ss_pred ccCCcc----eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH
Confidence 422111 111224689999999998763 346799999999999988888776543 777777777654310
Q ss_pred ---------ccchhh-----------hhhcCCCC---------------------------CChhhhccCCcchhhccCC
Q 008274 473 ---------YDTFYT-----------EKYMGLPS---------------------------EDPVGYEYSSVMHHVHKMK 505 (571)
Q Consensus 473 ---------~~~~~~-----------~~~~g~~~---------------------------~~~~~~~~~s~~~~~~~~~ 505 (571)
+...+. ..+.+... ...+.|...++...+.+++
T Consensus 176 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~ 255 (324)
T PRK10985 176 RMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIR 255 (324)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCC
Confidence 000000 00001000 0012233445556678889
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHHh
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERT 570 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~ 570 (571)
+|+|+++|++|..++++....+.+ ...++++.+++++||.... ........+.+.+||+..
T Consensus 256 ~P~lii~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 256 KPTLIIHAKDDPFMTHEVIPKPES----LPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCEEEEecCCCCCCChhhChHHHH----hCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999998776655432 2457888999999996421 123346667788888764
No 39
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.76 E-value=5.3e-18 Score=144.56 Aligned_cols=224 Identities=16% Similarity=0.137 Sum_probs=160.5
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+++.+.|..++++++..-+ ...|+++++|+..+... .+.....-++.+.+..|+.++|||.|.+
T Consensus 53 pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmG------hr~~i~~~fy~~l~mnv~ivsYRGYG~S 120 (300)
T KOG4391|consen 53 PYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMG------HRLPIARVFYVNLKMNVLIVSYRGYGKS 120 (300)
T ss_pred CceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCccc------chhhHHHHHHHHcCceEEEEEeeccccC
Confidence 56889999999999999988833 35699999999877654 1222223456789999999999999877
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---- 473 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---- 473 (571)
.+.....+ -.-|..++++|+..++..|..+++++|.|.||.+|..+++++.+++.|++.-.-+......
T Consensus 121 ~GspsE~G-------L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~ 193 (300)
T KOG4391|consen 121 EGSPSEEG-------LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL 193 (300)
T ss_pred CCCccccc-------eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe
Confidence 65433222 1568999999999999999999999999999999999999999999999987655543111
Q ss_pred cchhhhhhcCCCCCChhhhc-cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC
Q 008274 474 DTFYTEKYMGLPSEDPVGYE-YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR 552 (571)
Q Consensus 474 ~~~~~~~~~g~~~~~~~~~~-~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 552 (571)
-..+..++... --+. ..+....+..-+.|+|++.|.+|+.||+-+..++++...++ ..++..||++.|.=..
T Consensus 194 v~p~~~k~i~~-----lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~ 266 (300)
T KOG4391|consen 194 VFPFPMKYIPL-----LCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTW 266 (300)
T ss_pred eccchhhHHHH-----HHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCCccCceE
Confidence 00111111100 0001 11222334455679999999999999999999988876544 4577899999997422
Q ss_pred CCcHHHHHHHHHHHHHH
Q 008274 553 HRDRIYMEERIWEFIER 569 (571)
Q Consensus 553 ~~~~~~~~~~i~~fl~~ 569 (571)
-....++.|.+||.+
T Consensus 267 --i~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 267 --ICDGYFQAIEDFLAE 281 (300)
T ss_pred --EeccHHHHHHHHHHH
Confidence 123456777788765
No 40
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.76 E-value=4.4e-17 Score=159.29 Aligned_cols=236 Identities=15% Similarity=0.105 Sum_probs=143.8
Q ss_pred hccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEEC
Q 008274 311 IKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLD 390 (571)
Q Consensus 311 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d 390 (571)
++++.+ ..+.+.+...+|..+...+. ..+. ...|.||++||.+.... .|...+..|.++||.|+++|
T Consensus 14 ~~~~~~-~~~~~~~~~~~~~~~~i~y~-~~G~----~~~~~lvliHG~~~~~~-------~w~~~~~~L~~~gy~vi~~D 80 (302)
T PRK00870 14 LPDYPF-APHYVDVDDGDGGPLRMHYV-DEGP----ADGPPVLLLHGEPSWSY-------LYRKMIPILAAAGHRVIAPD 80 (302)
T ss_pred CcCCCC-CceeEeecCCCCceEEEEEE-ecCC----CCCCEEEEECCCCCchh-------hHHHHHHHHHhCCCEEEEEC
Confidence 333434 45556666655654333222 2221 12367899999765432 35667788888899999999
Q ss_pred CCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 391 NRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 391 ~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+||+|.+..... ......++..+.+..+.++- +.+++.++|||+||.+++.++.++|+++++++..++....
T Consensus 81 l~G~G~S~~~~~------~~~~~~~~~a~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 152 (302)
T PRK00870 81 LIGFGRSDKPTR------REDYTYARHVEWMRSWFEQL--DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPT 152 (302)
T ss_pred CCCCCCCCCCCC------cccCCHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCC
Confidence 999997743110 01122444444444444432 4568999999999999999999999999999887753211
Q ss_pred cc------ccch-----------hhhhhc-CCC-CCC---hhhh-------------------ccC---C--------cc
Q 008274 471 DG------YDTF-----------YTEKYM-GLP-SED---PVGY-------------------EYS---S--------VM 498 (571)
Q Consensus 471 ~~------~~~~-----------~~~~~~-g~~-~~~---~~~~-------------------~~~---s--------~~ 498 (571)
.. +..+ ...... +.. ... ...| ... + ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (302)
T PRK00870 153 GDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAW 232 (302)
T ss_pred ccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHH
Confidence 00 0000 000000 000 000 0000 000 0 01
Q ss_pred hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 499 ~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..+.++++|+|+++|++|..++... ..+.+.+... ....+.+++++||.+ ..++.+.+.+.+.+||+++
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~-~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFL-QEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcccc-cccceeeecCCCccc-hhhChHHHHHHHHHHHhcC
Confidence 2346788999999999999999765 6666655321 123477899999997 5577789999999999875
No 41
>PLN02511 hydrolase
Probab=99.76 E-value=2.8e-17 Score=164.93 Aligned_cols=237 Identities=19% Similarity=0.126 Sum_probs=150.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...+...||..+...++.+... ..+...|+||++||..++.. ..| +...+..+.++||.|+++|+||+|++
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~--~~y---~~~~~~~~~~~g~~vv~~d~rG~G~s 143 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSD--DSY---VRHMLLRARSKGWRVVVFNSRGCADS 143 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCC--CHH---HHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 4466678888998887655543221 11134589999999766532 111 22345566789999999999999877
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCe--eEEEEEcCccCCcc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV--FQCAVSGAPVTSWD---- 471 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~--~~~~v~~~~~~~~~---- 471 (571)
...- ...+.....+|+.++++++..+. ...++.++|||+||.+++.++.++++. +.+++++++..+..
T Consensus 144 ~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~ 217 (388)
T PLN02511 144 PVTT----PQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADE 217 (388)
T ss_pred CCCC----cCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHH
Confidence 4311 11112334789999999998763 346899999999999999999999876 67776665544321
Q ss_pred --------cccchhh----------hhhcC-CC---------------------------CCCh-hhhccCCcchhhccC
Q 008274 472 --------GYDTFYT----------EKYMG-LP---------------------------SEDP-VGYEYSSVMHHVHKM 504 (571)
Q Consensus 472 --------~~~~~~~----------~~~~g-~~---------------------------~~~~-~~~~~~s~~~~~~~~ 504 (571)
.+...+. ...+. .+ .... +.|...++...+.+|
T Consensus 218 ~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I 297 (388)
T PLN02511 218 DFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHV 297 (388)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccC
Confidence 0000000 00000 00 0011 123345566678889
Q ss_pred CCcEEEEecCCCCCCChHHH-HHHHHHHHHcCCCeeEEEcCCCCCCCCCCC--c---HHHHHHHHHHHHHHh
Q 008274 505 KGKLLLVHGMIDENVHFRHT-ARLINALVAARKPYEILIFPDERHMPRRHR--D---RIYMEERIWEFIERT 570 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~---~~~~~~~i~~fl~~~ 570 (571)
++|+|+|+|++|++++.... ..+. +...++++++++++||...... . ...+.+.+.+||+..
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~----~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDI----KANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHH----hcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 99999999999999987643 2222 2346889999999999752211 1 123567788888653
No 42
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=1.4e-16 Score=161.47 Aligned_cols=193 Identities=15% Similarity=0.148 Sum_probs=139.3
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeE--EEEEEeccCccEEEEEEECCCCceEEEEEeecCCe
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNIL--TAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~--i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
.+||++|.++++.++++. .......|.|||||+. +++++.+.+ ..+||++|+++|+.++|+......
T Consensus 165 ~~l~~~d~dG~~~~~lt~---------~~~~~~sP~wSPDG~~~~~~y~S~~~g-~~~I~~~~l~~g~~~~lt~~~g~~- 233 (428)
T PRK01029 165 GELWSVDYDGQNLRPLTQ---------EHSLSITPTWMHIGSGFPYLYVSYKLG-VPKIFLGSLENPAGKKILALQGNQ- 233 (428)
T ss_pred ceEEEEcCCCCCceEccc---------CCCCcccceEccCCCceEEEEEEccCC-CceEEEEECCCCCceEeecCCCCc-
Confidence 479999999999988854 3344567999999985 556777663 578999999999999997643321
Q ss_pred eeccCCcccCCCCCccCCCe--EEEEEecCCccEEEEE--eCCC---ceeeceeecCeEE-EEEEEEeecCcEEEEEEcC
Q 008274 158 VNLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLH--DING---TCLGPITEGDWMV-EQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~--~~~~---~~~~~lT~~~~~~-~~~~~~s~dg~~l~~~~~~ 229 (571)
+.| .|+||+ ++|.+++.|..++|+. ++++ ++.++||.+.... ..+ .|||||+.|+|.+++
T Consensus 234 ------~~p-----~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p-~wSPDG~~Laf~s~~ 301 (428)
T PRK01029 234 ------LMP-----TFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNP-SFSPDGTRLVFVSNK 301 (428)
T ss_pred ------cce-----EECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCe-EECCCCCEEEEEECC
Confidence 111 456665 8888888888888885 4443 4678888765433 344 599999999999987
Q ss_pred CCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 230 DGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 230 ~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
++. .+||.+++...+. ..++++...+ ...+.+||||++++|..... ...+|+++++.+++ .+.|+.
T Consensus 302 ~g~--~~ly~~~~~~~g~----~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~-~~~Lt~ 368 (428)
T PRK01029 302 DGR--PRIYIMQIDPEGQ----SPRLLTKKYRNSSCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGR-DYQLTT 368 (428)
T ss_pred CCC--ceEEEEECccccc----ceEEeccCCCCccceeECCCCCEEEEEEcCC-CCcEEEEEECCCCC-eEEccC
Confidence 664 6899988732222 4677886543 34568999999999987553 34689999996665 466654
No 43
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=2.8e-16 Score=158.21 Aligned_cols=192 Identities=14% Similarity=0.086 Sum_probs=142.3
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeE-EEEEEeccCccEEEEEEECCCCceEEEEEeecCCe
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNIL-TAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~-i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
..+|++.|.++...+.++. .. ....+.|||||+. +++.+.+. ...+||++|+++|+.++|+..... .
T Consensus 168 ~~~l~~~d~dg~~~~~~~~---------~~-~~~~p~wSpDG~~~i~y~s~~~-~~~~Iyv~dl~tg~~~~lt~~~g~-~ 235 (419)
T PRK04043 168 KSNIVLADYTLTYQKVIVK---------GG-LNIFPKWANKEQTAFYYTSYGE-RKPTLYKYNLYTGKKEKIASSQGM-L 235 (419)
T ss_pred cceEEEECCCCCceeEEcc---------CC-CeEeEEECCCCCcEEEEEEccC-CCCEEEEEECCCCcEEEEecCCCc-E
Confidence 3589999999988777643 22 5667999999985 66766654 245899999999999999763221 1
Q ss_pred eeccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 158 VNLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
. .+ .|++|+ +++...+.|..+||++++++++.++||........+ .|+|||+.|+|++++.+. .
T Consensus 236 ~--~~---------~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p-~~SPDG~~I~F~Sdr~g~--~ 301 (419)
T PRK04043 236 V--VS---------DVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNG-NFVEDDKRIVFVSDRLGY--P 301 (419)
T ss_pred E--ee---------EECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCcc-EECCCCCEEEEEECCCCC--c
Confidence 0 01 244554 777777788899999999999999999876422333 599999999999998764 8
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCC-----CCCEEEEEEcCCCceeEeccCC
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLD-----SPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~-----~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
+||++++ +++ ..++++.... ....+||||++++|+..... ....|+++++.+++ .+.|+..
T Consensus 302 ~Iy~~dl--~~g----~~~rlt~~g~-~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~-~~~LT~~ 367 (419)
T PRK04043 302 NIFMKKL--NSG----SVEQVVFHGK-NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY-IRRLTAN 367 (419)
T ss_pred eEEEEEC--CCC----CeEeCccCCC-cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC-eEECCCC
Confidence 9999999 444 5667876432 34589999999999876532 33689999986665 5677653
No 44
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.75 E-value=4.1e-17 Score=162.65 Aligned_cols=208 Identities=14% Similarity=0.055 Sum_probs=154.7
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||+.|+|+....++. .+++++|+++++...+..
T Consensus 195 ~~~p~ws~~~~~~~y~~f~~~~~--------------------------------~~i~~~~l~~g~~~~i~~------- 235 (425)
T COG0823 195 ILTPAWSPDGKKLAYVSFELGGC--------------------------------PRIYYLDLNTGKRPVILN------- 235 (425)
T ss_pred eeccccCcCCCceEEEEEecCCC--------------------------------ceEEEEeccCCccceeec-------
Confidence 34578999999999987654441 257999999887665522
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.......|.|||||++++|+..|+ ...+||++|+.+++.++|+....... .+ +|++|| ++|.|
T Consensus 236 --~~g~~~~P~fspDG~~l~f~~~rd-g~~~iy~~dl~~~~~~~Lt~~~gi~~---~P---------s~spdG~~ivf~S 300 (425)
T COG0823 236 --FNGNNGAPAFSPDGSKLAFSSSRD-GSPDIYLMDLDGKNLPRLTNGFGINT---SP---------SWSPDGSKIVFTS 300 (425)
T ss_pred --cCCccCCccCCCCCCEEEEEECCC-CCccEEEEcCCCCcceecccCCcccc---Cc---------cCCCCCCEEEEEe
Confidence 344556689999999999999998 56789999999999877766433211 22 455555 99999
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
++.|..+||+++++++..+++|....... .+.|||||++|.|.+...+ +.++...++.+++ ..+.++.....
T Consensus 301 dr~G~p~I~~~~~~g~~~~riT~~~~~~~-~p~~SpdG~~i~~~~~~~g--~~~i~~~~~~~~~-----~~~~lt~~~~~ 372 (425)
T COG0823 301 DRGGRPQIYLYDLEGSQVTRLTFSGGGNS-NPVWSPDGDKIVFESSSGG--QWDIDKNDLASGG-----KIRILTSTYLN 372 (425)
T ss_pred CCCCCcceEEECCCCCceeEeeccCCCCc-CccCCCCCCEEEEEeccCC--ceeeEEeccCCCC-----cEEEccccccC
Confidence 99999999999999999999998533222 4569999999999996544 3778888773322 35677765555
Q ss_pred EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
...+++++|+.++|..... .-+.++.+.+ +++
T Consensus 373 e~ps~~~ng~~i~~~s~~~-~~~~l~~~s~-~g~ 404 (425)
T COG0823 373 ESPSWAPNGRMIMFSSGQG-GGSVLSLVSL-DGR 404 (425)
T ss_pred CCCCcCCCCceEEEeccCC-CCceEEEeec-cce
Confidence 5679999999999987776 3446666665 444
No 45
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.75 E-value=2.9e-17 Score=175.98 Aligned_cols=191 Identities=19% Similarity=0.280 Sum_probs=145.4
Q ss_pred hhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC--CCc------------CCcEEEEee
Q 008274 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG--LAK------------VGHIGLYGW 440 (571)
Q Consensus 375 ~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~d------------~~~i~l~G~ 440 (571)
+.++++.+||+|+.+|.||+++|++.+.. .+..+.+|..++|+|+..+. +.| ..+|+++|.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 36889999999999999999998775532 22345789999999998531 123 579999999
Q ss_pred chHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-c--------hh--------hh----hhc--CC-------------
Q 008274 441 SYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-T--------FY--------TE----KYM--GL------------- 484 (571)
Q Consensus 441 S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~--------~~--------~~----~~~--g~------------- 484 (571)
||||++++.+|+..|+.++|+|..+++.+|..+. . .| .+ +.. +.
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~ 425 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLA 425 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHh
Confidence 9999999999998889999999999998764211 0 00 00 000 00
Q ss_pred -----C----CCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCc
Q 008274 485 -----P----SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRD 555 (571)
Q Consensus 485 -----~----~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 555 (571)
. ....+.|...+++.+++++++|+|++||..|.++++.++.+++++|++.+.+.++.+.++ +|.......
T Consensus 426 ~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~~~ 504 (767)
T PRK05371 426 ELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPNNWQ 504 (767)
T ss_pred hhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCchh
Confidence 0 001123455677788999999999999999999999999999999999888999877766 786544445
Q ss_pred HHHHHHHHHHHHHHhC
Q 008274 556 RIYMEERIWEFIERTL 571 (571)
Q Consensus 556 ~~~~~~~i~~fl~~~l 571 (571)
..++.+.+.+||+++|
T Consensus 505 ~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 505 SIDFRDTMNAWFTHKL 520 (767)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 6778899999999886
No 46
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.75 E-value=3.9e-17 Score=158.33 Aligned_cols=201 Identities=16% Similarity=0.192 Sum_probs=130.2
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+. ....+++.||.|+++|+||+|.+...... ........+|+.++++.+
T Consensus 31 ~~ivllHG~~~~~~---~~~~~~~-~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~l----- 98 (282)
T TIGR03343 31 EAVIMLHGGGPGAG---GWSNYYR-NIGPFVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDAL----- 98 (282)
T ss_pred CeEEEECCCCCchh---hHHHHHH-HHHHHHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHHc-----
Confidence 56889999765532 3322111 23456678999999999999887532110 000011234454444443
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-c--------cchh-------h---hhhcC----CC-
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-Y--------DTFY-------T---EKYMG----LP- 485 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~-~--------~~~~-------~---~~~~g----~~- 485 (571)
+.+++.++||||||.+++.++.++|++++++|+.+|...... . ...+ . ..++. .+
T Consensus 99 -~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (282)
T TIGR03343 99 -DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQS 177 (282)
T ss_pred -CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcc
Confidence 567999999999999999999999999999998876421100 0 0000 0 00000 00
Q ss_pred CCC--------------hh---hh---------ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 486 SED--------------PV---GY---------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 486 ~~~--------------~~---~~---------~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
... +. .+ ...+....+.++++|+|+++|++|..++++.++++.+.+ .+++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~----~~~~ 253 (282)
T TIGR03343 178 LITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM----PDAQ 253 (282)
T ss_pred cCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC----CCCE
Confidence 000 00 00 011122346678899999999999999998888887765 5789
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+++++++||.+ ..+....+.+.+.+||.
T Consensus 254 ~~~i~~agH~~-~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 254 LHVFSRCGHWA-QWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEEeCCCCcCC-cccCHHHHHHHHHHHhh
Confidence 99999999997 56778889999999986
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.74 E-value=1.2e-16 Score=153.08 Aligned_cols=231 Identities=16% Similarity=0.140 Sum_probs=145.0
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+.+.++. +|..+.+.++.|... ++ |.||++|||+.... ..+ ..+..+++.|+++||.|+++|+||+|.+..
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~----~~-~~vv~i~gg~~~~~--g~~-~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~ 73 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGAS----HT-TGVLIVVGGPQYRV--GSH-RQFVLLARRLAEAGFPVLRFDYRGMGDSEG 73 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCC----CC-CeEEEEeCCccccC--Cch-hHHHHHHHHHHHCCCEEEEeCCCCCCCCCC
Confidence 4567775 567899999999752 23 45666777654322 111 123446788999999999999999987653
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-c----
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-D---- 474 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~---- 474 (571)
... ... ...+|+.++++++.++.. ..++++++|||+||.+++.++.. +..++++|+.+|...-... .
T Consensus 74 ~~~--~~~----~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~ 145 (274)
T TIGR03100 74 ENL--GFE----GIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRI 145 (274)
T ss_pred CCC--CHH----HHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHH
Confidence 211 111 125789999999976521 23579999999999999988764 5678999999887431110 0
Q ss_pred -chhh---------hhh-cCCCCCC--hhhhc-------c-----------CCcchhhccCCCcEEEEecCCCCCCChHH
Q 008274 475 -TFYT---------EKY-MGLPSED--PVGYE-------Y-----------SSVMHHVHKMKGKLLLVHGMIDENVHFRH 523 (571)
Q Consensus 475 -~~~~---------~~~-~g~~~~~--~~~~~-------~-----------~s~~~~~~~~~~p~lli~G~~D~~v~~~~ 523 (571)
..+. .++ .|..... ...+. . ......+..+++|+|+++|+.|...+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~ 225 (274)
T TIGR03100 146 RHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFA 225 (274)
T ss_pred HHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHH
Confidence 0000 111 1110000 00000 0 00112345678899999999998753111
Q ss_pred H-----HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 524 T-----ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 524 ~-----~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
. ..+.+.+. ..++++..+|+++|.+.....+..+.+.|.+||++
T Consensus 226 ~~~~~~~~~~~~l~--~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 226 DSVLGEPAWRGALE--DPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHhccChhhHHHhh--cCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 0 12222221 25788999999999887778889999999999963
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.74 E-value=3.9e-17 Score=160.53 Aligned_cols=234 Identities=15% Similarity=0.126 Sum_probs=146.4
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc-----------------ccc----hhhhHHHHhC
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI-----------------NTV----DMRAQYLRSK 382 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-----------------~~~----~~~~~~l~~~ 382 (571)
|.+.||..|..+.|.|+. +..+|+++||....... .|. .+| ..+++.|+++
T Consensus 2 ~~~~~g~~l~~~~~~~~~------~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~ 73 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN------AIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN 73 (332)
T ss_pred ccCCCCCeEEEeeeeccC------CeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC
Confidence 456789999999998852 45799999995544320 000 011 3468899999
Q ss_pred CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc------------------CCCcCCcEEEEeechHH
Q 008274 383 GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ------------------GLAKVGHIGLYGWSYGG 444 (571)
Q Consensus 383 G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~~i~l~G~S~GG 444 (571)
||.|+++|.||+|.+...-.....-..-...++|+.+.++.+.+. .+-+..+++|+||||||
T Consensus 74 G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg 153 (332)
T TIGR01607 74 GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGG 153 (332)
T ss_pred CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCcc
Confidence 999999999999976532100000000011246677777766541 11114579999999999
Q ss_pred HHHHHHHhcCCC--------eeEEEEEcCccCCcccc--------cch----------hhhhh-cCC-C--CCCh---hh
Q 008274 445 YLSAITLARFPD--------VFQCAVSGAPVTSWDGY--------DTF----------YTEKY-MGL-P--SEDP---VG 491 (571)
Q Consensus 445 ~~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~--------~~~----------~~~~~-~g~-~--~~~~---~~ 491 (571)
.+++.++..++. .++++|+.+|....... ... +...+ .+. . ..++ +.
T Consensus 154 ~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 233 (332)
T TIGR01607 154 NIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDI 233 (332)
T ss_pred HHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhH
Confidence 999998865432 57888877776432110 000 00000 000 0 0000 00
Q ss_pred hccCCc----------------------chhhccC--CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCC
Q 008274 492 YEYSSV----------------------MHHVHKM--KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDER 547 (571)
Q Consensus 492 ~~~~s~----------------------~~~~~~~--~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 547 (571)
+ ..+| ...+.++ +.|+|++||++|.+++++.+..+++++.. .+.++++|++++
T Consensus 234 ~-~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~ 310 (332)
T TIGR01607 234 I-KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMD 310 (332)
T ss_pred H-hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCC
Confidence 0 0011 1123445 57999999999999999998888776532 467888999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHH
Q 008274 548 HMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 548 H~~~~~~~~~~~~~~i~~fl~ 568 (571)
|.+........+.+.+.+||+
T Consensus 311 H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 311 HVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCccCCCHHHHHHHHHHHhh
Confidence 998766667889999999986
No 49
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.74 E-value=5.3e-17 Score=140.30 Aligned_cols=145 Identities=23% Similarity=0.220 Sum_probs=112.7
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
+||++||+..+.. .+..+++.|+++||.|+.+|+|+.+.+.. ..++.++++.+.....
T Consensus 1 ~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~- 58 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-------DYQPLAEALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAGYP- 58 (145)
T ss_dssp EEEEECTTTTTTH-------HHHHHHHHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHHHC-
T ss_pred CEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhhcC-
Confidence 5788999877533 34567899999999999999999887632 2245555555533222
Q ss_pred cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEE
Q 008274 431 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~ll 510 (571)
|.++++++|||+||.+++.++.++ ..++++|+.+|..+ ...+.+.+.|+++
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~----------------------------~~~~~~~~~pv~~ 109 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD----------------------------SEDLAKIRIPVLF 109 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG----------------------------CHHHTTTTSEEEE
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc----------------------------hhhhhccCCcEEE
Confidence 889999999999999999999987 77899999887200 1234566679999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
++|++|..+++++..++++++ ..+.++.++++++|+
T Consensus 110 i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 110 IHGENDPLVPPEQVRRLYEAL---PGPKELYIIPGAGHF 145 (145)
T ss_dssp EEETT-SSSHHHHHHHHHHHH---CSSEEEEEETTS-TT
T ss_pred EEECCCCcCCHHHHHHHHHHc---CCCcEEEEeCCCcCc
Confidence 999999999999999998888 467899999999995
No 50
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.74 E-value=6.3e-17 Score=154.34 Aligned_cols=200 Identities=15% Similarity=0.167 Sum_probs=130.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
+.|+||++||.+++.. . |...+..|. +||.|+++|+||+|.+..... .....+|..+.+..++++
T Consensus 12 ~~~~iv~lhG~~~~~~---~----~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~i~~ 76 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS---Y----WAPQLDVLT-QRFHVVTYDHRGTGRSPGELP-------PGYSIAHMADDVLQLLDA 76 (257)
T ss_pred CCCEEEEEcCCCcchh---H----HHHHHHHHH-hccEEEEEcCCCCCCCCCCCc-------ccCCHHHHHHHHHHHHHH
Confidence 4588999999776532 2 333445554 589999999999988753211 112244444444444433
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-hh------------------------hhhhc
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT-FY------------------------TEKYM 482 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~------------------------~~~~~ 482 (571)
. +..++.++|||+||.+++.++.++|+.++++|+.++......... .+ ...++
T Consensus 77 ~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T TIGR03611 77 L--NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWI 154 (257)
T ss_pred h--CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHh
Confidence 2 456899999999999999999999999999888876543211000 00 00000
Q ss_pred CC--C------------CCCh-------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 483 GL--P------------SEDP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 483 g~--~------------~~~~-------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
.. + .... ......+....+.++++|+|+++|++|..++++.++.+++.+ .+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~ 230 (257)
T TIGR03611 155 SENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL----PNAQLK 230 (257)
T ss_pred hccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc----CCceEE
Confidence 00 0 0000 001112223446678899999999999999999888887765 356888
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++++||.+. .++...+.+.+.+||++
T Consensus 231 ~~~~~gH~~~-~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 231 LLPYGGHASN-VTDPETFNRALLDFLKT 257 (257)
T ss_pred EECCCCCCcc-ccCHHHHHHHHHHHhcC
Confidence 9999999873 46778889999999863
No 51
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=3.5e-16 Score=159.78 Aligned_cols=205 Identities=12% Similarity=0.090 Sum_probs=141.8
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|||++.++.. .+|+++|+++++.+.+..
T Consensus 206 v~~p~wSPDG~~la~~s~~~~~---------------------------------~~i~i~dl~tg~~~~l~~------- 245 (429)
T PRK01742 206 LMSPAWSPDGSKLAYVSFENKK---------------------------------SQLVVHDLRSGARKVVAS------- 245 (429)
T ss_pred cccceEcCCCCEEEEEEecCCC---------------------------------cEEEEEeCCCCceEEEec-------
Confidence 3568899999999998754221 268999999988776643
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.......+.|||||+.|++...++ +..+||.+|+++++.++|+..... ...+ .|++|+ ++|.+
T Consensus 246 --~~g~~~~~~wSPDG~~La~~~~~~-g~~~Iy~~d~~~~~~~~lt~~~~~---~~~~---------~wSpDG~~i~f~s 310 (429)
T PRK01742 246 --FRGHNGAPAFSPDGSRLAFASSKD-GVLNIYVMGANGGTPSQLTSGAGN---NTEP---------SWSPDGQSILFTS 310 (429)
T ss_pred --CCCccCceeECCCCCEEEEEEecC-CcEEEEEEECCCCCeEeeccCCCC---cCCE---------EECCCCCEEEEEE
Confidence 122334689999999988876554 346799999999998888753221 1111 345554 78888
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
++.|..+||.++..++..++++... .. ..|+|||++|++.+. .+++.+++ .+. ..++++.....
T Consensus 311 ~~~g~~~I~~~~~~~~~~~~l~~~~---~~-~~~SpDG~~ia~~~~------~~i~~~Dl--~~g----~~~~lt~~~~~ 374 (429)
T PRK01742 311 DRSGSPQVYRMSASGGGASLVGGRG---YS-AQISADGKTLVMING------DNVVKQDL--TSG----STEVLSSTFLD 374 (429)
T ss_pred CCCCCceEEEEECCCCCeEEecCCC---CC-ccCCCCCCEEEEEcC------CCEEEEEC--CCC----CeEEecCCCCC
Confidence 8889999999998887777775432 12 359999999999865 34677887 332 44556543223
Q ss_pred EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
..++|||||+.+++.... .....+++.+. +|+..+.|.
T Consensus 375 ~~~~~sPdG~~i~~~s~~-g~~~~l~~~~~-~G~~~~~l~ 412 (429)
T PRK01742 375 ESPSISPNGIMIIYSSTQ-GLGKVLQLVSA-DGRFKARLP 412 (429)
T ss_pred CCceECCCCCEEEEEEcC-CCceEEEEEEC-CCCceEEcc
Confidence 456899999999887653 34445666665 566566664
No 52
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.74 E-value=9.5e-17 Score=156.41 Aligned_cols=205 Identities=12% Similarity=-0.003 Sum_probs=132.2
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|++. |.|+++|+||+|.+...-...... .....++|+.+.+..++++-
T Consensus 30 ~~vlllHG~~~~~~-------~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~-~~~~~~~~~a~~l~~~l~~l- 99 (294)
T PLN02824 30 PALVLVHGFGGNAD-------HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPP-NSFYTFETWGEQLNDFCSDV- 99 (294)
T ss_pred CeEEEECCCCCChh-------HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccc-cccCCHHHHHHHHHHHHHHh-
Confidence 67899999877643 345567777765 699999999999875321000000 01223455555555554432
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc---ccc----c-------ch----------hh-------
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW---DGY----D-------TF----------YT------- 478 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~---~~~----~-------~~----------~~------- 478 (571)
..+++.++||||||.+++.++.++|++++++|+.++.... ... . .. +.
T Consensus 100 -~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (294)
T PLN02824 100 -VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPET 178 (294)
T ss_pred -cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHH
Confidence 2368999999999999999999999999999998764310 000 0 00 00
Q ss_pred -hhh----cCCC-CCChh----------------hhc---cC----CcchhhccCCCcEEEEecCCCCCCChHHHHHHHH
Q 008274 479 -EKY----MGLP-SEDPV----------------GYE---YS----SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 479 -~~~----~g~~-~~~~~----------------~~~---~~----s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
... .+.. ....+ .+. .. .....+.++++|+|+++|++|..++.+.+..+.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~ 258 (294)
T PLN02824 179 VKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYAN 258 (294)
T ss_pred HHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHh
Confidence 000 0000 00000 000 00 1123366788999999999999999887766544
Q ss_pred HHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 530 ALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
. ....++.+++++||.. ..++...+.+.+.+||+++
T Consensus 259 ~----~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 259 F----DAVEDFIVLPGVGHCP-QDEAPELVNPLIESFVARH 294 (294)
T ss_pred c----CCccceEEeCCCCCCh-hhhCHHHHHHHHHHHHhcC
Confidence 2 3446889999999987 5578889999999999874
No 53
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.73 E-value=4.7e-17 Score=157.23 Aligned_cols=230 Identities=18% Similarity=0.249 Sum_probs=141.6
Q ss_pred CCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 315 QLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 315 ~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
.....+.+.|+..+ ..|++++..|+.. ++.|+||++-|..+.+. . .+..+..+++.+|++++++|.||.
T Consensus 161 ~~~~i~~v~iP~eg-~~I~g~LhlP~~~----~p~P~VIv~gGlDs~qe---D---~~~l~~~~l~~rGiA~LtvDmPG~ 229 (411)
T PF06500_consen 161 SDYPIEEVEIPFEG-KTIPGYLHLPSGE----KPYPTVIVCGGLDSLQE---D---LYRLFRDYLAPRGIAMLTVDMPGQ 229 (411)
T ss_dssp SSSEEEEEEEEETT-CEEEEEEEESSSS----S-EEEEEEE--TTS-GG---G---GHHHHHCCCHHCT-EEEEE--TTS
T ss_pred CCCCcEEEEEeeCC-cEEEEEEEcCCCC----CCCCEEEEeCCcchhHH---H---HHHHHHHHHHhCCCEEEEEccCCC
Confidence 34567889999855 8899999999843 78999998766444332 1 122234568899999999999999
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC-Cccc-
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT-SWDG- 472 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~-~~~~- 472 (571)
|.+.... ... ..-.-..+.+++|.+.+++|.+||+++|.|+||++|..+|..++++++++|+..|++ ++..
T Consensus 230 G~s~~~~---l~~----D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~ 302 (411)
T PF06500_consen 230 GESPKWP---LTQ----DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD 302 (411)
T ss_dssp GGGTTT----S-S-----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-
T ss_pred cccccCC---CCc----CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc
Confidence 8653211 111 112235688999999999999999999999999999999987888999988877754 3211
Q ss_pred ------ccchhhh---hhcCCCCCChh----hhccCCcchh--h--ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 473 ------YDTFYTE---KYMGLPSEDPV----GYEYSSVMHH--V--HKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 473 ------~~~~~~~---~~~g~~~~~~~----~~~~~s~~~~--~--~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
....+.. ..+|....+.+ .....|.... + .+.++|+|.+.|++|.++|.+.+..++.. +
T Consensus 303 ~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~----s 378 (411)
T PF06500_consen 303 PEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES----S 378 (411)
T ss_dssp HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT----B
T ss_pred HHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc----C
Confidence 0111111 11233221211 2234444332 3 45567999999999999999987766543 5
Q ss_pred CCeeEEEcCCCC-CCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDER-HMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~-H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+-+...+|... |. ........+.+||++.|
T Consensus 379 ~~gk~~~~~~~~~~~-----gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 379 TDGKALRIPSKPLHM-----GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp TT-EEEEE-SSSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCCceeecCCCcccc-----chHHHHHHHHHHHHHhc
Confidence 556667777644 42 34456778899998764
No 54
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=2.2e-15 Score=153.50 Aligned_cols=191 Identities=17% Similarity=0.148 Sum_probs=143.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.+++..++++. .......|.|||||+.+++++.+. ....|+++|+++|+.+.|+......
T Consensus 179 ~~l~~~d~dg~~~~~lt~---------~~~~~~~p~wSPDG~~la~~s~~~-g~~~i~i~dl~~G~~~~l~~~~~~~--- 245 (429)
T PRK03629 179 YELRVSDYDGYNQFVVHR---------SPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQVASFPRHN--- 245 (429)
T ss_pred eeEEEEcCCCCCCEEeec---------CCCceeeeEEcCCCCEEEEEEecC-CCcEEEEEECCCCCeEEccCCCCCc---
Confidence 589999999988887743 445677899999999999887554 3467999999999988886532210
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. .+.|++|+ ++|.+.+.|..+||++++++++.++||.+......+ .|+|||+.|+|.+++.+. .+|
T Consensus 246 ~---------~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~-~wSPDG~~I~f~s~~~g~--~~I 313 (429)
T PRK03629 246 G---------APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEP-TWFPDSQNLAYTSDQAGR--PQV 313 (429)
T ss_pred C---------CeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCce-EECCCCCEEEEEeCCCCC--ceE
Confidence 0 11355665 777777788889999999999999999876555555 599999999999987664 799
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ ++. ..++++...+ ...+.+||||+++++..... ....++++++.+++ .+.|+.
T Consensus 314 y~~d~--~~g----~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~-g~~~I~~~dl~~g~-~~~Lt~ 372 (429)
T PRK03629 314 YKVNI--NGG----APQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGG-VQVLTD 372 (429)
T ss_pred EEEEC--CCC----CeEEeecCCCCccCEEECCCCCEEEEEEccC-CCceEEEEECCCCC-eEEeCC
Confidence 99998 443 5667775433 23468999999999876543 45689999986665 456653
No 55
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.73 E-value=6.8e-16 Score=158.39 Aligned_cols=211 Identities=15% Similarity=0.087 Sum_probs=148.1
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|||+...... ..|+++|+++++.+.+..
T Consensus 193 ~~p~~Spdg~~la~~~~~~~~---------------------------------~~i~v~d~~~g~~~~~~~-------- 231 (417)
T TIGR02800 193 LSPAWSPDGQKLAYVSFESGK---------------------------------PEIYVQDLATGQREKVAS-------- 231 (417)
T ss_pred ecccCCCCCCEEEEEEcCCCC---------------------------------cEEEEEECCCCCEEEeec--------
Confidence 357799999999997644211 268999999998776643
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC--eEEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG--GFIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d--~~~~~s~ 183 (571)
.......+.|+|||+.+++..... +..+||.+|+++++.++|+..... ...+ .|++| .++|.++
T Consensus 232 -~~~~~~~~~~spDg~~l~~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~---~~~~---------~~s~dg~~l~~~s~ 297 (417)
T TIGR02800 232 -FPGMNGAPAFSPDGSKLAVSLSKD-GNPDIYVMDLDGKQLTRLTNGPGI---DTEP---------SWSPDGKSIAFTSD 297 (417)
T ss_pred -CCCCccceEECCCCCEEEEEECCC-CCccEEEEECCCCCEEECCCCCCC---CCCE---------EECCCCCEEEEEEC
Confidence 223344589999999888776544 345799999999988877643211 1111 23444 3778888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||++++.+++.++|+........+ .|+|||+.|+|+....+ ..+|+.+++ .+. ..+.++......
T Consensus 298 ~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~-~~spdg~~i~~~~~~~~--~~~i~~~d~--~~~----~~~~l~~~~~~~ 368 (417)
T TIGR02800 298 RGGSPQIYMMDADGGEVRRLTFRGGYNASP-SWSPDGDLIAFVHREGG--GFNIAVMDL--DGG----GERVLTDTGLDE 368 (417)
T ss_pred CCCCceEEEEECCCCCEEEeecCCCCccCe-EECCCCCEEEEEEccCC--ceEEEEEeC--CCC----CeEEccCCCCCC
Confidence 888889999999988888888654333444 49999999999987654 378999998 333 455666543334
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.+.++|||+++++....... ..+++.+. +++..+.+.
T Consensus 369 ~p~~spdg~~l~~~~~~~~~-~~l~~~~~-~g~~~~~~~ 405 (417)
T TIGR02800 369 SPSFAPNGRMILYATTRGGR-GVLGLVST-DGRFRARLP 405 (417)
T ss_pred CceECCCCCEEEEEEeCCCc-EEEEEEEC-CCceeeECC
Confidence 55899999999998876544 57777775 555555543
No 56
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.73 E-value=2.1e-16 Score=153.99 Aligned_cols=212 Identities=13% Similarity=0.090 Sum_probs=134.1
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.++.+..+. ..|.||++||.+++.. .|...++.|++.+ .|+++|+||+|.+.....
T Consensus 15 ~g~~i~y~~~G---------~g~~vvllHG~~~~~~-------~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~----- 72 (295)
T PRK03592 15 LGSRMAYIETG---------EGDPIVFLHGNPTSSY-------LWRNIIPHLAGLG-RCLAPDLIGMGASDKPDI----- 72 (295)
T ss_pred CCEEEEEEEeC---------CCCEEEEECCCCCCHH-------HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCC-----
Confidence 66666655432 1257888999876643 3455677888876 999999999998753211
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---cccccc----hh---
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYDT----FY--- 477 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---~~~~~~----~~--- 477 (571)
....++..+.+..+++.- ..+++.++|||+||.+++.++.++|++++++++.++... +..+.. .+
T Consensus 73 ---~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 147 (295)
T PRK03592 73 ---DYTFADHARYLDAWFDAL--GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQAL 147 (295)
T ss_pred ---CCCHHHHHHHHHHHHHHh--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHH
Confidence 112344444444444332 346899999999999999999999999999998886321 111000 00
Q ss_pred h----------------hhhcCCC---CCChh---hhc-----------------cCC--------------cchhhccC
Q 008274 478 T----------------EKYMGLP---SEDPV---GYE-----------------YSS--------------VMHHVHKM 504 (571)
Q Consensus 478 ~----------------~~~~g~~---~~~~~---~~~-----------------~~s--------------~~~~~~~~ 504 (571)
. ...+... ....+ .+. ... ....+.++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 227 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATS 227 (295)
T ss_pred hCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccC
Confidence 0 0000000 00000 000 000 01124567
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++|+|+++|++|..+++....++...+ ..+.++.+++++||.+. .+..+.+.+.+.+||++.
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSW---PNQLEITVFGAGLHFAQ-EDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHh---hhhcceeeccCcchhhh-hcCHHHHHHHHHHHHHHh
Confidence 899999999999999655555554433 23568889999999984 567889999999999874
No 57
>PLN02965 Probable pheophorbidase
Probab=99.73 E-value=1.3e-16 Score=151.76 Aligned_cols=198 Identities=12% Similarity=0.043 Sum_probs=127.2
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
.||++||.+.+.. .|...+..|++.||.|+++|+||+|.+..... ....++++.+.+..+++.-
T Consensus 5 ~vvllHG~~~~~~-------~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l-- 68 (255)
T PLN02965 5 HFVFVHGASHGAW-------CWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-------TVSSSDQYNRPLFALLSDL-- 68 (255)
T ss_pred EEEEECCCCCCcC-------cHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-------ccCCHHHHHHHHHHHHHhc--
Confidence 4888999876533 35556788888899999999999997752110 0112344444333333331
Q ss_pred cC-CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC--Cccc-ccc----------hh-------------------
Q 008274 431 KV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT--SWDG-YDT----------FY------------------- 477 (571)
Q Consensus 431 d~-~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~--~~~~-~~~----------~~------------------- 477 (571)
+. .++.++||||||.+++.++.++|++++.+|..++.. .... ... .+
T Consensus 69 ~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T PLN02965 69 PPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKP 148 (255)
T ss_pred CCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCH
Confidence 23 489999999999999999999999999988876541 1000 000 00
Q ss_pred --h-hhhcCCCCCChhhh----ccCC-------c---chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 478 --T-EKYMGLPSEDPVGY----EYSS-------V---MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 478 --~-~~~~g~~~~~~~~~----~~~s-------~---~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
. ..+..........+ .... . ...+..+++|+|+++|++|..+++..++.+.+.+ .+.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~----~~a~~ 224 (255)
T PLN02965 149 EFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW----PPAQT 224 (255)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC----CcceE
Confidence 0 00000000000000 0000 0 0123357899999999999999998888877655 45688
Q ss_pred EEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 541 LIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 541 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+++++||.+ ..++.+.+.+.+.+|++.
T Consensus 225 ~~i~~~GH~~-~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 225 YVLEDSDHSA-FFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred EEecCCCCch-hhcCHHHHHHHHHHHHHH
Confidence 8999999998 457788888999888765
No 58
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.72 E-value=2.5e-17 Score=156.23 Aligned_cols=198 Identities=14% Similarity=0.102 Sum_probs=128.2
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|+||++||.+.+.. .|...++.|. .||.|+++|+||+|.+.... ......+..+.+..+++.
T Consensus 12 ~~~~li~~hg~~~~~~-------~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-------MWDPVLPALT-PDFRVLRYDKRGHGLSDAPE--------GPYSIEDLADDVLALLDH 75 (251)
T ss_pred CCCeEEEEcCcccchh-------hHHHHHHHhh-cccEEEEecCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHH
Confidence 4589999999655533 2344455654 68999999999998764211 122345555555554443
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch------------------hhhhhc----CCC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF------------------YTEKYM----GLP 485 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------------------~~~~~~----g~~ 485 (571)
- +.+++.++|||+||.+++.++.++|++++++++.++.........+ ....++ ..+
T Consensus 76 ~--~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (251)
T TIGR02427 76 L--GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREA 153 (251)
T ss_pred h--CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccC
Confidence 2 4568999999999999999999999999988877654321110000 000000 000
Q ss_pred C-CChhh-------------------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 486 S-EDPVG-------------------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 486 ~-~~~~~-------------------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
. ...+. +...+....+.++++|+|+++|++|..++.+....+.+.+ .+.+++.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~ 229 (251)
T TIGR02427 154 HPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV----PGARFAEIRG 229 (251)
T ss_pred ChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC----CCceEEEECC
Confidence 0 00000 1111223345678899999999999999998877776654 3568889999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHH
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|.+. .+....+.+.+.+||+
T Consensus 230 ~gH~~~-~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 230 AGHIPC-VEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCccc-ccChHHHHHHHHHHhC
Confidence 999874 4567788888888873
No 59
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.72 E-value=2.6e-16 Score=165.53 Aligned_cols=133 Identities=20% Similarity=0.253 Sum_probs=104.3
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 325 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 325 ~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
++.||.+|.+.++.|++. ++.|+||++||..........+ ....+..|+++||+|+++|+||+|.++..+..
T Consensus 2 ~~~DG~~L~~~~~~P~~~----~~~P~Il~~~gyg~~~~~~~~~---~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~- 73 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGG----GPVPVILSRTPYGKDAGLRWGL---DKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL- 73 (550)
T ss_pred cCCCCCEEEEEEEecCCC----CCCCEEEEecCCCCchhhcccc---ccccHHHHHhCCcEEEEEeccccccCCCceEe-
Confidence 567999999999999753 5789999999865432100011 11235788999999999999999988754321
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
.+....+|+.++++|+.++++.+ .+|+++|+||||.+++.++..+|+.+++++..++..+.
T Consensus 74 ----~~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 74 ----LGSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred ----cCcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 11346899999999999998766 69999999999999999999999999999998887653
No 60
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.72 E-value=1.9e-16 Score=153.09 Aligned_cols=217 Identities=14% Similarity=0.042 Sum_probs=136.0
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...++..+.+....+ .+.|+||++||.+++.. .|......|++ +|.|+++|+||+|.+.....
T Consensus 9 ~~~~~~~~~~~~~~~g~-------~~~~~vv~~hG~~~~~~-------~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~ 73 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGP-------TAGPLLLLLHGTGASTH-------SWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR 73 (278)
T ss_pred ceeeECCEEEEEEecCC-------CCCCeEEEEcCCCCCHH-------HHHHHHHHHhh-CcEEEeecCCCCCCCCCccc
Confidence 33344666665443322 12378999999766533 23445666654 79999999999987643211
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--------c-
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--------Y- 473 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--------~- 473 (571)
....++++.+.+..+++.. +.++++|+|||+||.+++.++.++|++++++++.++...... +
T Consensus 74 -------~~~~~~~~~~~l~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 144 (278)
T TIGR03056 74 -------FRFTLPSMAEDLSALCAAE--GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYM 144 (278)
T ss_pred -------cCCCHHHHHHHHHHHHHHc--CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchh
Confidence 1123455555555555442 345789999999999999999999998888887765432100 0
Q ss_pred cch-----hh--------------hhhcC---CCCC--Chhhhc--------------------cCCcchhhccCCCcEE
Q 008274 474 DTF-----YT--------------EKYMG---LPSE--DPVGYE--------------------YSSVMHHVHKMKGKLL 509 (571)
Q Consensus 474 ~~~-----~~--------------~~~~g---~~~~--~~~~~~--------------------~~s~~~~~~~~~~p~l 509 (571)
... +. ...+. .... ....+. .......+.++++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 224 (278)
T TIGR03056 145 ARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLH 224 (278)
T ss_pred hHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEE
Confidence 000 00 00000 0000 000000 0001123566789999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+++|++|..+|....+.+.+.+ .+.++..++++||.+. .+....+.+.+.+||+
T Consensus 225 ii~g~~D~~vp~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 225 LIAGEEDKAVPPDESKRAATRV----PTATLHVVPGGGHLVH-EEQADGVVGLILQAAE 278 (278)
T ss_pred EEEeCCCcccCHHHHHHHHHhc----cCCeEEEECCCCCccc-ccCHHHHHHHHHHHhC
Confidence 9999999999998887776654 4568899999999874 4668889999999874
No 61
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=1.5e-15 Score=155.81 Aligned_cols=191 Identities=15% Similarity=0.168 Sum_probs=141.5
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
..+|+++|.+++..++++. ....+..+.|||||+.|++.+.+.. ...||++|+++|+.++|+......
T Consensus 181 ~~~l~~~d~dg~~~~~lt~---------~~~~v~~p~wSpDG~~lay~s~~~g-~~~i~~~dl~~g~~~~l~~~~g~~-- 248 (435)
T PRK05137 181 IKRLAIMDQDGANVRYLTD---------GSSLVLTPRFSPNRQEITYMSYANG-RPRVYLLDLETGQRELVGNFPGMT-- 248 (435)
T ss_pred ceEEEEECCCCCCcEEEec---------CCCCeEeeEECCCCCEEEEEEecCC-CCEEEEEECCCCcEEEeecCCCcc--
Confidence 3589999999988888753 4556788999999999999876543 468999999999988886533211
Q ss_pred eccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
..+ .|++|+ +++.+.++|..+||++++++++.++||........+ .|+|||++|+|.+++.+. .+
T Consensus 249 -----~~~-----~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~-~~spDG~~i~f~s~~~g~--~~ 315 (435)
T PRK05137 249 -----FAP-----RFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSP-SYSPDGSQIVFESDRSGS--PQ 315 (435)
T ss_pred -----cCc-----EECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCce-eEcCCCCEEEEEECCCCC--Ce
Confidence 111 345554 777777888899999999999999999866434444 599999999999987664 78
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
||.+++ ++. ..++++...+ ...+.+||||+++++...... -..++++++..+ ..+.++
T Consensus 316 Iy~~d~--~g~----~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~-~~~i~~~d~~~~-~~~~lt 374 (435)
T PRK05137 316 LYVMNA--DGS----NPRRISFGGGRYSTPVWSPRGDLIAFTKQGGG-QFSIGVMKPDGS-GERILT 374 (435)
T ss_pred EEEEEC--CCC----CeEEeecCCCcccCeEECCCCCEEEEEEcCCC-ceEEEEEECCCC-ceEecc
Confidence 999998 554 5678876543 334689999999999764432 357888887443 345554
No 62
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.72 E-value=2.2e-16 Score=152.22 Aligned_cols=213 Identities=18% Similarity=0.151 Sum_probs=135.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.++++...... ...|.||++||.+++.. .|......|.+ +|.|+++|+||+|.+...-
T Consensus 10 ~~~~~~~~~~~~~------~~~~plvllHG~~~~~~-------~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~------ 69 (276)
T TIGR02240 10 DGQSIRTAVRPGK------EGLTPLLIFNGIGANLE-------LVFPFIEALDP-DLEVIAFDVPGVGGSSTPR------ 69 (276)
T ss_pred CCcEEEEEEecCC------CCCCcEEEEeCCCcchH-------HHHHHHHHhcc-CceEEEECCCCCCCCCCCC------
Confidence 6667777654211 12256788999766543 24445666654 7999999999999875321
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc---cc-------cc--
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---GY-------DT-- 475 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---~~-------~~-- 475 (571)
.....+++.+.+..+++.- +.+++.|+||||||.+++.++.++|++++++|+.++..... .. ..
T Consensus 70 --~~~~~~~~~~~~~~~i~~l--~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (276)
T TIGR02240 70 --HPYRFPGLAKLAARMLDYL--DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPR 145 (276)
T ss_pred --CcCcHHHHHHHHHHHHHHh--CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCch
Confidence 0112333333333333321 44679999999999999999999999999999987654211 00 00
Q ss_pred hhh---------hhhcCCCC-CChh---h-------------hc------cCCcchhhccCCCcEEEEecCCCCCCChHH
Q 008274 476 FYT---------EKYMGLPS-EDPV---G-------------YE------YSSVMHHVHKMKGKLLLVHGMIDENVHFRH 523 (571)
Q Consensus 476 ~~~---------~~~~g~~~-~~~~---~-------------~~------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~ 523 (571)
.+. ..+.+... .+++ . +. .......+.++++|+|+++|+.|..+++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~ 225 (276)
T TIGR02240 146 RYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLIN 225 (276)
T ss_pred hhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHH
Confidence 000 00000000 0000 0 00 011123357888999999999999999998
Q ss_pred HHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 524 TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 524 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+.+.+ ...+++++++ ||.+ ..+....+.+.+.+|+++.
T Consensus 226 ~~~l~~~~----~~~~~~~i~~-gH~~-~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 226 MRLLAWRI----PNAELHIIDD-GHLF-LITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred HHHHHHhC----CCCEEEEEcC-CCch-hhccHHHHHHHHHHHHHHh
Confidence 88887765 3467778876 9986 4567888999999999864
No 63
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.72 E-value=5.2e-16 Score=152.10 Aligned_cols=224 Identities=17% Similarity=0.171 Sum_probs=154.0
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 325 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 325 ~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
....+..+.+.+|.|.. ....+.|+||++|||++....... ........++..|+.|+.+|||-.....
T Consensus 57 ~~~~~~~~~~~~y~p~~--~~~~~~p~vly~HGGg~~~g~~~~---~~~~~~~~~~~~g~~vv~vdYrlaPe~~------ 125 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR--KAAATAPVVLYLHGGGWVLGSLRT---HDALVARLAAAAGAVVVSVDYRLAPEHP------ 125 (312)
T ss_pred cCCCCCceeEEEECCCC--CCCCCCcEEEEEeCCeeeecChhh---hHHHHHHHHHHcCCEEEecCCCCCCCCC------
Confidence 34455558899999922 122568999999999887553222 1244566677899999999999654331
Q ss_pred HhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCccCCccc-cc--
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVTSWDG-YD-- 474 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~~~~~~-~~-- 474 (571)
-...++|+.++++|+.++ ..+|+++|+|+|+|.||++++.++..-.+ ...+.+.++|..+... ..
T Consensus 126 -----~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~ 200 (312)
T COG0657 126 -----FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASL 200 (312)
T ss_pred -----CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccch
Confidence 122378899999999876 35799999999999999999988865332 4577888888877653 10
Q ss_pred ---------------chhhhhhcCCCCCChhhhccCCcchhh--ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Q 008274 475 ---------------TFYTEKYMGLPSEDPVGYEYSSVMHHV--HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537 (571)
Q Consensus 475 ---------------~~~~~~~~g~~~~~~~~~~~~s~~~~~--~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~ 537 (571)
.++...+.+...+... ...+|+... .. -.|+++++|+.|...+ ++..+.++|+++|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~ 275 (312)
T COG0657 201 PGYGEADLLDAAAILAWFADLYLGAAPDRED--PEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVP 275 (312)
T ss_pred hhcCCccccCHHHHHHHHHHHhCcCccccCC--CccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCe
Confidence 0111222221111100 223444332 23 4689999999999988 899999999999999
Q ss_pred eeEEEcCCCCCCCC--CCCcHHHHHHHHHHHHHH
Q 008274 538 YEILIFPDERHMPR--RHRDRIYMEERIWEFIER 569 (571)
Q Consensus 538 ~~~~~~~~~~H~~~--~~~~~~~~~~~i~~fl~~ 569 (571)
+++..+++..|+|. ..........++.+|+..
T Consensus 276 ~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 276 VELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred EEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 99999999999883 322344446677777764
No 64
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.71 E-value=1.9e-16 Score=151.05 Aligned_cols=200 Identities=14% Similarity=0.060 Sum_probs=126.4
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
...|.||++||.+++.. .|...+..|+ .+|.|+.+|+||+|.+..... ....+ ..+|+.++++++
T Consensus 14 ~~~~~iv~lhG~~~~~~-------~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~-~~~~~----~~~d~~~~l~~l-- 78 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD-------NLGVLARDLV-NDHDIIQVDMRNHGLSPRDPV-MNYPA----MAQDLLDTLDAL-- 78 (255)
T ss_pred CCCCCEEEECCCCCchh-------HHHHHHHHHh-hCCeEEEECCCCCCCCCCCCC-CCHHH----HHHHHHHHHHHc--
Confidence 35588999999877643 2334455554 579999999999987653211 00001 134455555443
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc-CCcc--cccchhh--------------------hhhcC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV-TSWD--GYDTFYT--------------------EKYMG 483 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~-~~~~--~~~~~~~--------------------~~~~g 483 (571)
...++.++|||+||.+++.++.++|++++++++.++. ..+. .....+. ...+.
T Consensus 79 ----~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PRK10673 79 ----QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLN 154 (255)
T ss_pred ----CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcC
Confidence 3467999999999999999999999999998886421 1110 0000000 00000
Q ss_pred C---------CCCC------h----hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC
Q 008274 484 L---------PSED------P----VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 484 ~---------~~~~------~----~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
. .... . ..+........+.++++|+|+++|++|..++.+..+.+.+.+ .+.++.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~ 230 (255)
T PRK10673 155 EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIA 230 (255)
T ss_pred CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeC
Confidence 0 0000 0 001111111224456789999999999999988777776654 567889999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 545 DERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 545 ~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++||.+ ..+....+.+.+.+||.++
T Consensus 231 ~~gH~~-~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 231 GAGHWV-HAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCee-eccCHHHHHHHHHHHHhcC
Confidence 999976 4566788999999999763
No 65
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.71 E-value=1.3e-16 Score=152.85 Aligned_cols=212 Identities=23% Similarity=0.298 Sum_probs=139.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccc---ccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDS---WINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
||.+|.+.+|.| +. ...+++|+||..|+.......... ...........++++||+||..|.||++.|++.+...
T Consensus 1 DGv~L~adv~~P-~~-~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-CC-CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 789999999999 22 233799999999885532210000 0001111123499999999999999999998877543
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--------ccc-
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--------YDT- 475 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~- 475 (571)
...+.+|..++|+|+.++++.+ .||+++|.||+|..++.+|+..|..++|++...+..++.. +..
T Consensus 79 -----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~ 152 (272)
T PF02129_consen 79 -----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLG 152 (272)
T ss_dssp -----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCC
T ss_pred -----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccccc
Confidence 2234789999999999998754 6999999999999999999988888999999888766432 000
Q ss_pred ---hh------hhhhcCCC-------------------------------------CCChhhhccCCcchhhccCCCcEE
Q 008274 476 ---FY------TEKYMGLP-------------------------------------SEDPVGYEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 476 ---~~------~~~~~g~~-------------------------------------~~~~~~~~~~s~~~~~~~~~~p~l 509 (571)
.| ........ ....+.+.+.++...+.++++|+|
T Consensus 153 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l 232 (272)
T PF02129_consen 153 FFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVL 232 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEE
T ss_pred chhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEE
Confidence 11 00000000 011233444555566789999999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC
Q 008274 510 LVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM 549 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~ 549 (571)
++.|-.|.... ..+.+.+++|+..+ ++.++++-|. +|+
T Consensus 233 ~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 233 IVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp EEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred EecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 99999997777 88999999998887 6778887766 674
No 66
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.71 E-value=7.5e-15 Score=150.22 Aligned_cols=191 Identities=18% Similarity=0.132 Sum_probs=140.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.++...+.++. ....+..+.|||||+.+++.+.+. ...+||++|+++|+.++|+..... .
T Consensus 198 ~~l~i~d~dG~~~~~l~~---------~~~~~~~p~wSPDG~~La~~s~~~-g~~~L~~~dl~tg~~~~lt~~~g~---~ 264 (448)
T PRK04792 198 YQLMIADYDGYNEQMLLR---------SPEPLMSPAWSPDGRKLAYVSFEN-RKAEIFVQDIYTQVREKVTSFPGI---N 264 (448)
T ss_pred eEEEEEeCCCCCceEeec---------CCCcccCceECCCCCEEEEEEecC-CCcEEEEEECCCCCeEEecCCCCC---c
Confidence 478999999887776643 345667799999999999887664 356899999999998887643211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.. +.|++|+ +++.++++|..+||++++++++.++||.+......+ .|+|||+.|+|++++.+. .+|
T Consensus 265 ----~~-----~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p-~wSpDG~~I~f~s~~~g~--~~I 332 (448)
T PRK04792 265 ----GA-----PRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEP-SWHPDGKSLIFTSERGGK--PQI 332 (448)
T ss_pred ----CC-----eeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccce-EECCCCCEEEEEECCCCC--ceE
Confidence 01 1345554 777777888899999999999999999865434444 599999999999987664 799
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ ++. ..++|+.... .....+||||++++|.... .....|+++++.+++ .+.++.
T Consensus 333 y~~dl--~~g----~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~-~g~~~I~~~dl~~g~-~~~lt~ 391 (448)
T PRK04792 333 YRVNL--ASG----KVSRLTFEGEQNLGGSITPDGRSMIMVNRT-NGKFNIARQDLETGA-MQVLTS 391 (448)
T ss_pred EEEEC--CCC----CEEEEecCCCCCcCeeECCCCCEEEEEEec-CCceEEEEEECCCCC-eEEccC
Confidence 99998 443 5667764322 2345899999999987654 344588999986665 455554
No 67
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.71 E-value=5.5e-16 Score=130.64 Aligned_cols=202 Identities=21% Similarity=0.336 Sum_probs=142.4
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
+.++.+..+.|. +.+. +.|... +..|+.|++|-.|.....++ .......+..|.++||+++.+|+||.|++.
T Consensus 4 ~~~v~i~Gp~G~-le~~-~~~~~~----~~~~iAli~HPHPl~gGtm~--nkvv~~la~~l~~~G~atlRfNfRgVG~S~ 75 (210)
T COG2945 4 MPTVIINGPAGR-LEGR-YEPAKT----PAAPIALICHPHPLFGGTMN--NKVVQTLARALVKRGFATLRFNFRGVGRSQ 75 (210)
T ss_pred CCcEEecCCccc-ceec-cCCCCC----CCCceEEecCCCccccCccC--CHHHHHHHHHHHhCCceEEeeccccccccc
Confidence 455667766553 5554 334332 46789999887543322111 122344577888999999999999999887
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhh
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT 478 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 478 (571)
++| +.|..+.+|+.++++|+.++.- +..-..+.|+|+|+++++.++.+.|+. ...++.+|..+. ++
T Consensus 76 G~f------D~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--~d---- 141 (210)
T COG2945 76 GEF------DNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--YD---- 141 (210)
T ss_pred Ccc------cCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc--hh----
Confidence 765 3455669999999999998742 333458899999999999999988764 445555555431 00
Q ss_pred hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHH
Q 008274 479 EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIY 558 (571)
Q Consensus 479 ~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 558 (571)
+ ..+.....|.++++|+.|+++......++.+ +.+.++++.++++|.|. .....
T Consensus 142 -------------f------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~-----~~~~~~i~i~~a~HFF~--gKl~~ 195 (210)
T COG2945 142 -------------F------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQE-----SIKITVITIPGADHFFH--GKLIE 195 (210)
T ss_pred -------------h------hhccCCCCCceeEecChhhhhcHHHHHHhhc-----CCCCceEEecCCCceec--ccHHH
Confidence 0 1233345699999999999999887766655 47889999999999883 45667
Q ss_pred HHHHHHHHHH
Q 008274 559 MEERIWEFIE 568 (571)
Q Consensus 559 ~~~~i~~fl~ 568 (571)
+.+.+.+|+.
T Consensus 196 l~~~i~~~l~ 205 (210)
T COG2945 196 LRDTIADFLE 205 (210)
T ss_pred HHHHHHHHhh
Confidence 7888999983
No 68
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.70 E-value=5e-16 Score=150.73 Aligned_cols=201 Identities=15% Similarity=0.174 Sum_probs=126.1
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||++++.. . .+......+.+.||.|+++|+||+|.+....... ....+++..+.+..+.+..
T Consensus 25 ~~~vl~~hG~~g~~~---~---~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 93 (288)
T TIGR01250 25 KIKLLLLHGGPGMSH---E---YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSD-----ELWTIDYFVDELEEVREKL 93 (288)
T ss_pred CCeEEEEcCCCCccH---H---HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccc-----ccccHHHHHHHHHHHHHHc
Confidence 367888999876542 1 1233455566669999999999998764211000 0123455555555555542
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-----------chhh---h---------------
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----------TFYT---E--------------- 479 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-----------~~~~---~--------------- 479 (571)
+..++.++||||||.+++.++..+|++++++++.+++....... .... .
T Consensus 94 --~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (288)
T TIGR01250 94 --GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQE 171 (288)
T ss_pred --CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHH
Confidence 34579999999999999999999999999999877654311000 0000 0
Q ss_pred ---hhc----CCCCC------------Chhh---------------hccCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 480 ---KYM----GLPSE------------DPVG---------------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 480 ---~~~----g~~~~------------~~~~---------------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
.+. ..... .... +........+.++++|+|+++|++|.. ++....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~ 250 (288)
T TIGR01250 172 AVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAR 250 (288)
T ss_pred HHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHH
Confidence 000 00000 0000 000112234567889999999999984 566666
Q ss_pred HHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 526 RLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+.+.+ .+.++++++++||.+. .+....+.+.+.+||+
T Consensus 251 ~~~~~~----~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 251 EMQELI----AGSRLVVFPDGSHMTM-IEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHhc----cCCeEEEeCCCCCCcc-cCCHHHHHHHHHHHhC
Confidence 665544 4568889999999874 4678889999999874
No 69
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=9.5e-15 Score=149.05 Aligned_cols=191 Identities=18% Similarity=0.188 Sum_probs=138.9
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.++...+++.. ....+..++|||||+.|++.+.+. ....||+.|+++|+.++++..... .
T Consensus 176 ~~L~~~D~dG~~~~~l~~---------~~~~v~~p~wSPDG~~la~~s~~~-~~~~I~~~dl~~g~~~~l~~~~g~---~ 242 (427)
T PRK02889 176 YQLQISDADGQNAQSALS---------SPEPIISPAWSPDGTKLAYVSFES-KKPVVYVHDLATGRRRVVANFKGS---N 242 (427)
T ss_pred cEEEEECCCCCCceEecc---------CCCCcccceEcCCCCEEEEEEccC-CCcEEEEEECCCCCEEEeecCCCC---c
Confidence 478999998877676633 344567899999999999987654 345799999999998887643211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. .+.|++|+ +++.++++|..+||.++++++..++||.+......+ .|+|||++|+|.+++.+. .+|
T Consensus 243 ~---------~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~-~wSpDG~~l~f~s~~~g~--~~I 310 (427)
T PRK02889 243 S---------APAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEP-FFSPDGRSIYFTSDRGGA--PQI 310 (427)
T ss_pred c---------ceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCe-EEcCCCCEEEEEecCCCC--cEE
Confidence 0 11355554 777778888999999999988889998865333444 499999999999887654 789
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ ++. ..++++...+ .....+||||++++|..... ....|+++++.+++ .+.++.
T Consensus 311 y~~~~--~~g----~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~-g~~~I~v~d~~~g~-~~~lt~ 369 (427)
T PRK02889 311 YRMPA--SGG----AAQRVTFTGSYNTSPRISPDGKLLAYISRVG-GAFKLYVQDLATGQ-VTALTD 369 (427)
T ss_pred EEEEC--CCC----ceEEEecCCCCcCceEECCCCCEEEEEEccC-CcEEEEEEECCCCC-eEEccC
Confidence 99998 443 5566764332 23468999999999876543 34589999986665 456654
No 70
>PLN02872 triacylglycerol lipase
Probab=99.70 E-value=3.6e-16 Score=155.26 Aligned_cols=248 Identities=16% Similarity=0.147 Sum_probs=157.0
Q ss_pred ccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cchhhhHHHHhCCcEEEEE
Q 008274 312 KRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDMRAQYLRSKGILVWKL 389 (571)
Q Consensus 312 ~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~~~~~l~~~G~~v~~~ 389 (571)
..+++ ..|+..+++.||..|....+.+.......++.|+|+++||...+.. .|.. .....+..|+++||.|+++
T Consensus 38 ~~~gy-~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~---~w~~~~~~~sla~~La~~GydV~l~ 113 (395)
T PLN02872 38 HPAGY-SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD---AWFLNSPEQSLGFILADHGFDVWVG 113 (395)
T ss_pred HHcCC-CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc---ceeecCcccchHHHHHhCCCCcccc
Confidence 34444 7799999999999998877654321112234578999999765543 3321 1123456788999999999
Q ss_pred CCCCCCCC-hhhhHHHHhc-----cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC---eeEE
Q 008274 390 DNRGTARR-GLKFEASIKH-----NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VFQC 460 (571)
Q Consensus 390 d~rG~~~~-~~~~~~~~~~-----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~~~ 460 (571)
|.||++.+ +......... .+.+....|+.++++++.+.. ..++.++|||+||.+++.++ .+|+ .+++
T Consensus 114 n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~ 189 (395)
T PLN02872 114 NVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEA 189 (395)
T ss_pred cccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHH
Confidence 99997643 2111110000 111112468999999997652 36899999999999998555 4676 4666
Q ss_pred EEEcCccCCccc-------------------------c--cc-hh---hh--------------hhcCC-----------
Q 008274 461 AVSGAPVTSWDG-------------------------Y--DT-FY---TE--------------KYMGL----------- 484 (571)
Q Consensus 461 ~v~~~~~~~~~~-------------------------~--~~-~~---~~--------------~~~g~----------- 484 (571)
+++.+|+..+.. + .. .. .. ...|.
T Consensus 190 ~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~ 269 (395)
T PLN02872 190 AALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDY 269 (395)
T ss_pred HHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhH
Confidence 666666532100 0 00 00 00 00010
Q ss_pred -----CC---------------------------CChhhhccC-CcchhhccC--CCcEEEEecCCCCCCChHHHHHHHH
Q 008274 485 -----PS---------------------------EDPVGYEYS-SVMHHVHKM--KGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 485 -----~~---------------------------~~~~~~~~~-s~~~~~~~~--~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
|. .+...|... .|...+.++ +.|+++++|++|..+++.....+.+
T Consensus 270 ~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~ 349 (395)
T PLN02872 270 YLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLA 349 (395)
T ss_pred HHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHH
Confidence 00 011223222 234457777 4699999999999999999888888
Q ss_pred HHHHcCCCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 530 ALVAARKPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+. ...++..+++.+|. +...+.++.+++.+++||+++
T Consensus 350 ~Lp---~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 350 ELP---SKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred HCC---CccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 773 23578889999996 445677888999999999875
No 71
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.69 E-value=1.3e-15 Score=153.97 Aligned_cols=224 Identities=12% Similarity=0.109 Sum_probs=141.1
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH---hCCcEEEEECCCCCCCChh
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR---SKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~~~ 399 (571)
.+....+.++++....|.+. ...|.||++||.+++.. .|.. .....|+ +++|.|+++|+||+|.+..
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~----~~k~~VVLlHG~~~s~~---~W~~---~~~~~L~~~~~~~yrVia~Dl~G~G~S~~ 248 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDN----KAKEDVLFIHGFISSSA---FWTE---TLFPNFSDAAKSTYRLFAVDLLGFGRSPK 248 (481)
T ss_pred eeEeeCCeEEEEEEecCCCC----CCCCeEEEECCCCccHH---HHHH---HHHHHHHHHhhCCCEEEEECCCCCCCCcC
Confidence 33444557888888888653 23367889999876643 2321 1123333 4799999999999987753
Q ss_pred hhHHHHhccCCCCCchhHHHHH-HHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-----
Q 008274 400 KFEASIKHNCGRIDAEDQLTGA-EWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY----- 473 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~----- 473 (571)
... ....+++..+.+ ..+.+.. +.+++.++||||||.+++.++.++|++++++++.++.......
T Consensus 249 p~~-------~~ytl~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~ 319 (481)
T PLN03087 249 PAD-------SLYTLREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQAT 319 (481)
T ss_pred CCC-------CcCCHHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHH
Confidence 210 112244544444 2444432 4568999999999999999999999999999988754311000
Q ss_pred ---------cch------------hhh---hhc-----------------CCCCCChhhhc----cC--Cc---------
Q 008274 474 ---------DTF------------YTE---KYM-----------------GLPSEDPVGYE----YS--SV--------- 497 (571)
Q Consensus 474 ---------~~~------------~~~---~~~-----------------g~~~~~~~~~~----~~--s~--------- 497 (571)
... |.+ +.. -.+......+. .. .+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i 399 (481)
T PLN03087 320 QYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNII 399 (481)
T ss_pred HHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHH
Confidence 000 000 000 00000000000 00 00
Q ss_pred ----------c-hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHH
Q 008274 498 ----------M-HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 566 (571)
Q Consensus 498 ----------~-~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 566 (571)
+ ....++++|+|+++|++|..+|++.++.+.+.+ .+.+++++|++||.....+....+.+.+.+|
T Consensus 400 ~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i----P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F 475 (481)
T PLN03087 400 CGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV----PRARVKVIDDKDHITIVVGRQKEFARELEEI 475 (481)
T ss_pred hchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC----CCCEEEEeCCCCCcchhhcCHHHHHHHHHHH
Confidence 0 011268899999999999999999988887765 5679999999999864446678888888888
Q ss_pred HHH
Q 008274 567 IER 569 (571)
Q Consensus 567 l~~ 569 (571)
...
T Consensus 476 ~~~ 478 (481)
T PLN03087 476 WRR 478 (481)
T ss_pred hhc
Confidence 753
No 72
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.69 E-value=7.1e-16 Score=142.35 Aligned_cols=189 Identities=17% Similarity=0.106 Sum_probs=111.5
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhH-HHHhCCcEEEEECCCCC------CCChhhhHHHHhccC-CCCCchhHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQ-YLRSKGILVWKLDNRGT------ARRGLKFEASIKHNC-GRIDAEDQL 418 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~rG~------~~~~~~~~~~~~~~~-~~~~~~D~~ 418 (571)
++.|+||++||.+.+.. .| ..... .+......++.++-+-. |.....|........ ...+.+++.
T Consensus 12 ~~~~lvi~LHG~G~~~~---~~----~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSED---LF----ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp T-SEEEEEE--TTS-HH---HH----HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCceEEEEECCCCCCcc---hh----HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 57799999999655431 21 11122 22346788888875421 111112211100000 001122232
Q ss_pred -------HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhh
Q 008274 419 -------TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG 491 (571)
Q Consensus 419 -------~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 491 (571)
+.++...+ ..++.+||++.|.|+||.+++.++.++|..++++++.+|...... ..
T Consensus 85 ~s~~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~--------------~~--- 146 (216)
T PF02230_consen 85 ESAERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES--------------EL--- 146 (216)
T ss_dssp HHHHHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC--------------CC---
T ss_pred HHHHHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc--------------cc---
Confidence 22333333 348999999999999999999999999999999999987643210 00
Q ss_pred hccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 492 YEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 492 ~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
....... ++|++++||..|+++|.+.++...+.|++.+.++++..|++.||.+ ..+..+.+.+||+++
T Consensus 147 ------~~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-----~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 147 ------EDRPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-----SPEELRDLREFLEKH 215 (216)
T ss_dssp ------HCCHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred ------cccccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-----CHHHHHHHHHHHhhh
Confidence 0001111 6799999999999999999999999999999999999999999998 345678899999987
Q ss_pred C
Q 008274 571 L 571 (571)
Q Consensus 571 l 571 (571)
+
T Consensus 216 ~ 216 (216)
T PF02230_consen 216 I 216 (216)
T ss_dssp -
T ss_pred C
Confidence 5
No 73
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.69 E-value=6.8e-15 Score=140.78 Aligned_cols=225 Identities=16% Similarity=0.113 Sum_probs=155.2
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHH-HhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
....+..++|.|.... ..++.|+|||+|||++... ......++.+...+ .+.+..|+++|||-....
T Consensus 70 ~~~~l~vRly~P~~~~-~~~~~p~lvyfHGGGf~~~--S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh--------- 137 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSS-SETKLPVLVYFHGGGFCLG--SANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH--------- 137 (336)
T ss_pred CCCCeEEEEEcCCCCC-cccCceEEEEEeCCccEeC--CCCCchhHHHHHHHHHHcCeEEEecCcccCCCC---------
Confidence 3445899999998752 2268899999999987643 22233455556666 579999999999954321
Q ss_pred ccCCCCCchhHHHHHHHHHHc----CCCcCCcEEEEeechHHHHHHHHHhcC------CCeeEEEEEcCccCCccccc--
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQ----GLAKVGHIGLYGWSYGGYLSAITLARF------PDVFQCAVSGAPVTSWDGYD-- 474 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~----~~~d~~~i~l~G~S~GG~~a~~~~~~~------~~~~~~~v~~~~~~~~~~~~-- 474 (571)
.-...++|..++++|+.++ ..+|.+||+|+|-|.||.+|..++.+. +..+++.|++.|+..-....
T Consensus 138 --~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 138 --PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred --CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCH
Confidence 1223489999999999885 568999999999999999998877542 35679999999987532111
Q ss_pred ------------------chhhhhhcCCCCCChhhhccCCcch-----hhccCC-CcEEEEecCCCCCCChHHHHHHHHH
Q 008274 475 ------------------TFYTEKYMGLPSEDPVGYEYSSVMH-----HVHKMK-GKLLLVHGMIDENVHFRHTARLINA 530 (571)
Q Consensus 475 ------------------~~~~~~~~g~~~~~~~~~~~~s~~~-----~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~ 530 (571)
.+|. .++..-..+.+ -...+|.. ...... +|+|++.++.|... .++..++++
T Consensus 216 e~~~~~~~~~~~~~~~~~~~w~-~~lP~~~~~~~-~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~ 291 (336)
T KOG1515|consen 216 EKQQNLNGSPELARPKIDKWWR-LLLPNGKTDLD-HPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEK 291 (336)
T ss_pred HHHHhhcCCcchhHHHHHHHHH-HhCCCCCCCcC-CccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHH
Confidence 1111 11111000010 01112222 111222 47999999999886 588999999
Q ss_pred HHHcCCCeeEEEcCCCCCCCC--CC--CcHHHHHHHHHHHHHHh
Q 008274 531 LVAARKPYEILIFPDERHMPR--RH--RDRIYMEERIWEFIERT 570 (571)
Q Consensus 531 l~~~~~~~~~~~~~~~~H~~~--~~--~~~~~~~~~i~~fl~~~ 570 (571)
|++.|++++++.++++.|++. .+ .......+++.+|+++.
T Consensus 292 Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 292 LKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999999999999862 22 35677889999999875
No 74
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.69 E-value=6.7e-16 Score=154.03 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=126.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|++ +|.|+++|+||+|.+..... .....++..+.+..+.+.-
T Consensus 89 p~lvllHG~~~~~~-------~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~~l~~~l~~l- 152 (360)
T PLN02679 89 PPVLLVHGFGASIP-------HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-------FSYTMETWAELILDFLEEV- 152 (360)
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-------ccccHHHHHHHHHHHHHHh-
Confidence 67889999776533 34445666655 89999999999997753110 0112333333333333221
Q ss_pred CcCCcEEEEeechHHHHHHHHHh-cCCCeeEEEEEcCccCCc---------cc---------cc-----c-----hhh--
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLA-RFPDVFQCAVSGAPVTSW---------DG---------YD-----T-----FYT-- 478 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~-~~~~~~~~~v~~~~~~~~---------~~---------~~-----~-----~~~-- 478 (571)
..+++.|+|||+||.+++.+++ .+|++++++|+.++.... .. +. . .+.
T Consensus 153 -~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (360)
T PLN02679 153 -VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRV 231 (360)
T ss_pred -cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHh
Confidence 3468999999999999988887 479999999987754211 00 00 0 000
Q ss_pred --hh----h----cCCCCC-C----------------hhhhc-------cCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 479 --EK----Y----MGLPSE-D----------------PVGYE-------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 479 --~~----~----~g~~~~-~----------------~~~~~-------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
.. . ...+.. . ...+. ..+....+.++++|+|+++|++|..+|+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~ 311 (360)
T PLN02679 232 KQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGP 311 (360)
T ss_pred cCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhh
Confidence 00 0 000000 0 00000 0111234667889999999999999998743
Q ss_pred -HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 525 -ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 525 -~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++.+.+.+.-.+.+++++|++||.+ ..+..+.+.+.+.+||++
T Consensus 312 ~~~~~~~l~~~ip~~~l~~i~~aGH~~-~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 312 VGKYFSSLPSQLPNVTLYVLEGVGHCP-HDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHhhhccCCceEEEEcCCCCCCc-cccCHHHHHHHHHHHHHh
Confidence 23444555444678999999999987 567789999999999976
No 75
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.69 E-value=7.4e-16 Score=138.93 Aligned_cols=193 Identities=13% Similarity=0.125 Sum_probs=122.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC--CChhhhHHHHhccC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA--RRGLKFEASIKHNC 409 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~~~~~~~~~~~~~ 409 (571)
|.+.+|.|+.. ..++.|+||++||..++.. .|... ..+.+...++||+|+.|+..... .....|.. .....
T Consensus 1 l~Y~lYvP~~~--~~~~~PLVv~LHG~~~~a~---~~~~~-s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~ 73 (220)
T PF10503_consen 1 LSYRLYVPPGA--PRGPVPLVVVLHGCGQSAE---DFAAG-SGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQR 73 (220)
T ss_pred CcEEEecCCCC--CCCCCCEEEEeCCCCCCHH---HHHhh-cCHHHHhhcCCeEEEcccccccCCCCCcccccc-ccccc
Confidence 45789999864 2247899999999766543 22211 12234444789999999864322 22222222 22233
Q ss_pred CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc--chhhhhhcCCCCC
Q 008274 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD--TFYTEKYMGLPSE 487 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~g~~~~ 487 (571)
+..+...+.+.++++..+..+|++||.+.|+|.||.|+..+++.+|++|+++..++++.--.... ........+.. .
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~-~ 152 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPR-P 152 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCC-C
Confidence 44456677888999999988999999999999999999999999999999988887764211000 00100000111 1
Q ss_pred ChhhhccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 488 DPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 488 ~~~~~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
.+..... ........ ..|++++||+.|..|.+.++.++.+.+...
T Consensus 153 ~p~~~~~--a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 153 APAAAWG--ARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred ChHHHHH--hhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 1111100 00001011 249999999999999999999999887654
No 76
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=2.4e-16 Score=139.73 Aligned_cols=217 Identities=21% Similarity=0.185 Sum_probs=152.0
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.-.++|+..+|.+|.+|+..|...+ ++.|+||..||-.+... .|.. .-.++..||+|+.+|.||.|++.
T Consensus 56 ~ydvTf~g~~g~rI~gwlvlP~~~~---~~~P~vV~fhGY~g~~g---~~~~-----~l~wa~~Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 56 VYDVTFTGYGGARIKGWLVLPRHEK---GKLPAVVQFHGYGGRGG---EWHD-----MLHWAVAGYAVFVMDVRGQGSSS 124 (321)
T ss_pred EEEEEEeccCCceEEEEEEeecccC---CccceEEEEeeccCCCC---Cccc-----cccccccceeEEEEecccCCCcc
Confidence 3457888899999999999998642 68899999999655532 2211 23567889999999999988763
Q ss_pred hhhH----H-H--HhccCCC----------CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 399 LKFE----A-S--IKHNCGR----------IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 399 ~~~~----~-~--~~~~~~~----------~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
.+-. . . ...-.|. ..+.|+..+++.+.+...+|.+||++.|.|.||.+++.+++. ..+++++
T Consensus 125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal-~~rik~~ 203 (321)
T COG3458 125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL-DPRIKAV 203 (321)
T ss_pred ccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc-Chhhhcc
Confidence 2110 0 0 0000111 136789999999999999999999999999999999988885 4577999
Q ss_pred EEcCccCCc-ccc-----cchhhh--hhcCC--CCCC--hhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHH
Q 008274 462 VSGAPVTSW-DGY-----DTFYTE--KYMGL--PSED--PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 462 v~~~~~~~~-~~~-----~~~~~~--~~~g~--~~~~--~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
++..|+..- ... ...|.+ +|+.. +.+. .+...-.+..+.+.+++.|+|+..|--|++||+.....+++
T Consensus 204 ~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN 283 (321)
T COG3458 204 VADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYN 283 (321)
T ss_pred cccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhh
Confidence 998887542 110 011111 12211 1110 01222235556788999999999999999999998888888
Q ss_pred HHHHcCCCeeEEEcCCCCCCC
Q 008274 530 ALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~~ 550 (571)
++ -.+.++.+||.-+|.-
T Consensus 284 ~l---~~~K~i~iy~~~aHe~ 301 (321)
T COG3458 284 AL---TTSKTIEIYPYFAHEG 301 (321)
T ss_pred cc---cCCceEEEeecccccc
Confidence 87 4556778888888964
No 77
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.68 E-value=9.5e-16 Score=146.19 Aligned_cols=192 Identities=18% Similarity=0.176 Sum_probs=125.1
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|......|.+ .|.|+++|+||+|.+... .....+++. +.+.+.
T Consensus 14 ~~ivllHG~~~~~~-------~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~---------~~~~~~~~~---~~l~~~-- 71 (256)
T PRK10349 14 VHLVLLHGWGLNAE-------VWRCIDEELSS-HFTLHLVDLPGFGRSRGF---------GALSLADMA---EAVLQQ-- 71 (256)
T ss_pred CeEEEECCCCCChh-------HHHHHHHHHhc-CCEEEEecCCCCCCCCCC---------CCCCHHHHH---HHHHhc--
Confidence 56899999766543 34445667755 599999999999876421 111233333 333332
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc------ccccc---------------hhhhhhc-----C
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW------DGYDT---------------FYTEKYM-----G 483 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~------~~~~~---------------~~~~~~~-----g 483 (571)
..+++.++|||+||.+++.++.++|++++++++.++.... ..... .....++ +
T Consensus 72 -~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T PRK10349 72 -APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG 150 (256)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHcc
Confidence 3468999999999999999999999999999887653211 00000 0000110 1
Q ss_pred CCCCC-----------------h-------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 484 LPSED-----------------P-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 484 ~~~~~-----------------~-------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
..... . ..+...+....+.++++|+|+++|+.|..+|.+.+..+.+.+ .+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i----~~~~ 226 (256)
T PRK10349 151 TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW----PHSE 226 (256)
T ss_pred CchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC----CCCe
Confidence 10000 0 001112223346678899999999999999988776665544 5779
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++++|++||.+ ..++...+.+.+.+|-++
T Consensus 227 ~~~i~~~gH~~-~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 227 SYIFAKAAHAP-FISHPAEFCHLLVALKQR 255 (256)
T ss_pred EEEeCCCCCCc-cccCHHHHHHHHHHHhcc
Confidence 99999999987 457888888888887543
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.68 E-value=1.6e-15 Score=139.80 Aligned_cols=234 Identities=15% Similarity=0.156 Sum_probs=152.8
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+...+..+||..+...+..++.. .+.|+||.+||-.++.. +...+.++..+.++||.|+++|.||+++
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL~G~s~-----s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~ 117 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGLEGSSN-----SPYARGLMRALSRRGWLVVVFHFRGCSG 117 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccc----cCCceEEEEeccCCCCc-----CHHHHHHHHHHHhcCCeEEEEecccccC
Confidence 34455577777887666666664332 56699999999666543 2234556778889999999999999987
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEE-cCccCCc---
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVS-GAPVTSW--- 470 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~-~~~~~~~--- 470 (571)
.... ...-+.....+|+..+++++.++. -..++..+|.|+||.+.+..+.+..+ ...|+++ .+|+ |+
T Consensus 118 ~~n~----~p~~yh~G~t~D~~~~l~~l~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~-Dl~~~ 190 (345)
T COG0429 118 EANT----SPRLYHSGETEDIRFFLDWLKARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF-DLEAC 190 (345)
T ss_pred Cccc----CcceecccchhHHHHHHHHHHHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH-HHHHH
Confidence 6431 222223344699999999999865 36789999999999555555544322 2344444 4442 21
Q ss_pred --------c--cccchh---hhh--------h-----------------------------cCCCCCChhhhccCCcchh
Q 008274 471 --------D--GYDTFY---TEK--------Y-----------------------------MGLPSEDPVGYEYSSVMHH 500 (571)
Q Consensus 471 --------~--~~~~~~---~~~--------~-----------------------------~g~~~~~~~~~~~~s~~~~ 500 (571)
. .|...+ .++ + .|.+ +..+.|...|.+..
T Consensus 191 ~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~-da~dYYr~aSs~~~ 269 (345)
T COG0429 191 AYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFA-DAEDYYRQASSLPL 269 (345)
T ss_pred HHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCC-cHHHHHHhcccccc
Confidence 1 010000 000 0 0110 12356788899999
Q ss_pred hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC-C-C-CCCc-HHHHHHHHHHHHHHh
Q 008274 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM-P-R-RHRD-RIYMEERIWEFIERT 570 (571)
Q Consensus 501 ~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~-~-~-~~~~-~~~~~~~i~~fl~~~ 570 (571)
+.+|++|+||||+.+|++++++.-...-.. .+..+.+.+.+-+||. + . ...+ .....+++.+||+..
T Consensus 270 L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 270 LPKIRKPTLIINAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ccccccceEEEecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 999999999999999999987543333222 4688999999999995 3 2 1212 236778899999865
No 79
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=2.7e-14 Score=146.74 Aligned_cols=191 Identities=18% Similarity=0.165 Sum_probs=140.3
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.+++..+.+.. ....+..+.|||||+.|++++.+. ...+||++|+++|+.++|+..... .
T Consensus 179 ~~l~~~d~~g~~~~~l~~---------~~~~~~~p~wSpDG~~la~~s~~~-~~~~l~~~~l~~g~~~~l~~~~g~---~ 245 (430)
T PRK00178 179 YTLQRSDYDGARAVTLLQ---------SREPILSPRWSPDGKRIAYVSFEQ-KRPRIFVQNLDTGRREQITNFEGL---N 245 (430)
T ss_pred eEEEEECCCCCCceEEec---------CCCceeeeeECCCCCEEEEEEcCC-CCCEEEEEECCCCCEEEccCCCCC---c
Confidence 478999999988777743 344667899999999999887664 345799999999998887643211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. . +.|++|+ ++|...++|..+||++++++++.++||........+ .|+|||+.|+|.+++.+. .+|
T Consensus 246 ~----~-----~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~-~~spDg~~i~f~s~~~g~--~~i 313 (430)
T PRK00178 246 G----A-----PAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEP-FWGKDGRTLYFTSDRGGK--PQI 313 (430)
T ss_pred C----C-----eEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCe-EECCCCCEEEEEECCCCC--ceE
Confidence 0 1 1345554 777777788899999999999999999765444444 499999999999987764 789
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ .+. ..++++.... ...+.+||||++++|..... ....|+++++.+++ .+.|+.
T Consensus 314 y~~d~--~~g----~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~-~~~~l~~~dl~tg~-~~~lt~ 372 (430)
T PRK00178 314 YKVNV--NGG----RAERVTFVGNYNARPRLSADGKTLVMVHRQD-GNFHVAAQDLQRGS-VRILTD 372 (430)
T ss_pred EEEEC--CCC----CEEEeecCCCCccceEECCCCCEEEEEEccC-CceEEEEEECCCCC-EEEccC
Confidence 99998 443 5567765332 23458999999999986543 34579999986665 466654
No 80
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=2.5e-14 Score=146.17 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=133.6
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.++...+.++ .....+..|.|||||+.+++.+.+. ....|++.|+++|+.+.++..... .
T Consensus 184 ~~i~i~d~dg~~~~~lt---------~~~~~v~~p~wSPDG~~la~~s~~~-~~~~i~i~dl~tg~~~~l~~~~g~---~ 250 (429)
T PRK01742 184 YEVRVADYDGFNQFIVN---------RSSQPLMSPAWSPDGSKLAYVSFEN-KKSQLVVHDLRSGARKVVASFRGH---N 250 (429)
T ss_pred EEEEEECCCCCCceEec---------cCCCccccceEcCCCCEEEEEEecC-CCcEEEEEeCCCCceEEEecCCCc---c
Confidence 47899999988766653 2345677899999999999887654 345799999999988777543211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. .+.|++|+ +++.+.++|..+||++++++++.++||.+...+..+ .|+|||+.|+|.+++.+. .+|
T Consensus 251 ~---------~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~-~wSpDG~~i~f~s~~~g~--~~I 318 (429)
T PRK01742 251 G---------APAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEP-SWSPDGQSILFTSDRSGS--PQV 318 (429)
T ss_pred C---------ceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCE-EECCCCCEEEEEECCCCC--ceE
Confidence 0 11455665 666667788889999999999999999876555555 499999999999987764 799
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
|.++. .+. ..++++.. + ....+||||+++++... ..++++++.+++. +.++
T Consensus 319 ~~~~~--~~~----~~~~l~~~-~-~~~~~SpDG~~ia~~~~-----~~i~~~Dl~~g~~-~~lt 369 (429)
T PRK01742 319 YRMSA--SGG----GASLVGGR-G-YSAQISADGKTLVMING-----DNVVKQDLTSGST-EVLS 369 (429)
T ss_pred EEEEC--CCC----CeEEecCC-C-CCccCCCCCCEEEEEcC-----CCEEEEECCCCCe-EEec
Confidence 99987 443 34455432 3 44689999999988754 3578888866653 3443
No 81
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=2.7e-14 Score=146.23 Aligned_cols=192 Identities=19% Similarity=0.178 Sum_probs=139.7
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
...|+++|.+++..++++. ....+..+.|||||+.|++.+.+. ...+||++|+++|+.++|+.....
T Consensus 183 ~~~l~i~D~~g~~~~~lt~---------~~~~v~~p~wSpDg~~la~~s~~~-~~~~l~~~dl~~g~~~~l~~~~g~--- 249 (433)
T PRK04922 183 RYALQVADSDGYNPQTILR---------SAEPILSPAWSPDGKKLAYVSFER-GRSAIYVQDLATGQRELVASFRGI--- 249 (433)
T ss_pred eEEEEEECCCCCCceEeec---------CCCccccccCCCCCCEEEEEecCC-CCcEEEEEECCCCCEEEeccCCCC---
Confidence 3579999999888777743 344567899999999999887554 356799999999998887643211
Q ss_pred eccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.. .+.|++|+ +++...++|..+||++++++++.++||........+ .|+|||++|+|.+++.+. .+
T Consensus 250 ~~---------~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~-~~spDG~~l~f~sd~~g~--~~ 317 (433)
T PRK04922 250 NG---------APSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEP-TWAPDGKSIYFTSDRGGR--PQ 317 (433)
T ss_pred cc---------CceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccce-EECCCCCEEEEEECCCCC--ce
Confidence 10 11345554 777777788889999999999999998764333344 599999999999987764 78
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
||.+++ ++. ..++++.... ...+.+||||++++|.... .....|+++++.+++ .+.|+.
T Consensus 318 iy~~dl--~~g----~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~-~~~~~I~v~d~~~g~-~~~Lt~ 377 (433)
T PRK04922 318 IYRVAA--SGG----SAERLTFQGNYNARASVSPDGKKIAMVHGS-GGQYRIAVMDLSTGS-VRTLTP 377 (433)
T ss_pred EEEEEC--CCC----CeEEeecCCCCccCEEECCCCCEEEEEECC-CCceeEEEEECCCCC-eEECCC
Confidence 999998 443 5667765432 2346999999999997653 333489999986655 456654
No 82
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.67 E-value=1e-15 Score=144.61 Aligned_cols=190 Identities=18% Similarity=0.189 Sum_probs=124.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|+ .+|.|+++|+||+|.+... . ..++...++.+.+..
T Consensus 5 ~~iv~~HG~~~~~~-------~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~---~~~~~~~~~~~~~~~- 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAE-------VFRCLDEELS-AHFTLHLVDLPGHGRSRGF---------G---PLSLADAAEAIAAQA- 63 (245)
T ss_pred ceEEEEcCCCCchh-------hHHHHHHhhc-cCeEEEEecCCcCccCCCC---------C---CcCHHHHHHHHHHhC-
Confidence 67899999766533 2444566665 4799999999999876421 1 123344444444432
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---cc--------ch----h-------hhhh-----c
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---YD--------TF----Y-------TEKY-----M 482 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~---~~--------~~----~-------~~~~-----~ 482 (571)
.+++.++|||+||.+++.++.++|++++++|+.++...+.. +. .. . ...+ +
T Consensus 64 --~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (245)
T TIGR01738 64 --PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTL 141 (245)
T ss_pred --CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 26899999999999999999999999999887765432110 00 00 0 0000 1
Q ss_pred CCCCCChh------------------------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCe
Q 008274 483 GLPSEDPV------------------------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPY 538 (571)
Q Consensus 483 g~~~~~~~------------------------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~ 538 (571)
+....... .+...+....+.++++|+|+++|++|..++++....+.+.+ .++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~ 217 (245)
T TIGR01738 142 GTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA----PHS 217 (245)
T ss_pred cCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC----CCC
Confidence 11110000 00111122345788999999999999999998877776654 467
Q ss_pred eEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 539 EILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 539 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
++++++++||.+ ..++...+.+.+.+|+
T Consensus 218 ~~~~~~~~gH~~-~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 218 ELYIFAKAAHAP-FLSHAEAFCALLVAFK 245 (245)
T ss_pred eEEEeCCCCCCc-cccCHHHHHHHHHhhC
Confidence 899999999987 4467888888888885
No 83
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.67 E-value=2.1e-15 Score=147.44 Aligned_cols=219 Identities=16% Similarity=0.143 Sum_probs=133.0
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
-.+...+|..+++..+.++ +.+.||++||++++.. . ......+...+|.|+++|+||+|.+....
T Consensus 7 ~~~~~~~~~~l~y~~~g~~-------~~~~lvllHG~~~~~~---~-----~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 71 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNP-------DGKPVVFLHGGPGSGT---D-----PGCRRFFDPETYRIVLFDQRGCGKSTPHA 71 (306)
T ss_pred CeEEcCCCcEEEEEECcCC-------CCCEEEEECCCCCCCC---C-----HHHHhccCccCCEEEEECCCCCCCCCCCC
Confidence 3555667777776554221 1245688999877532 1 11233455679999999999998765211
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc----------
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---------- 471 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---------- 471 (571)
. .......|+.+.+..+.+.- +.+++.++||||||.+++.++.++|++++++|+.++.....
T Consensus 72 ~------~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 143 (306)
T TIGR01249 72 C------LEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGG 143 (306)
T ss_pred C------cccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcc
Confidence 0 01122455666666665542 34679999999999999999999999988888766532100
Q ss_pred ---cccchhh--------------------hhhcCCCC-------------C----------------Chh---hhcc--
Q 008274 472 ---GYDTFYT--------------------EKYMGLPS-------------E----------------DPV---GYEY-- 494 (571)
Q Consensus 472 ---~~~~~~~--------------------~~~~g~~~-------------~----------------~~~---~~~~-- 494 (571)
.+...+. ..+..... . ++. .+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (306)
T TIGR01249 144 ASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLE 223 (306)
T ss_pred hhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHH
Confidence 0000000 00000000 0 000 0000
Q ss_pred ---------C----CcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHH
Q 008274 495 ---------S----SVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYME 560 (571)
Q Consensus 495 ---------~----s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 560 (571)
. +....+.++ ++|+|++||+.|..+|+..+..+++.+ .+.++++++++||....++ ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~----~~ 295 (306)
T TIGR01249 224 NHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF----PEAELKVTNNAGHSAFDPN----NL 295 (306)
T ss_pred HhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC----CCCEEEEECCCCCCCCChH----HH
Confidence 0 011234556 489999999999999999988888765 3578889999999874333 44
Q ss_pred HHHHHHHHHhC
Q 008274 561 ERIWEFIERTL 571 (571)
Q Consensus 561 ~~i~~fl~~~l 571 (571)
+.+.+|++..|
T Consensus 296 ~~i~~~~~~~~ 306 (306)
T TIGR01249 296 AALVHALETYL 306 (306)
T ss_pred HHHHHHHHHhC
Confidence 66777776654
No 84
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.67 E-value=1.4e-15 Score=143.99 Aligned_cols=197 Identities=15% Similarity=0.169 Sum_probs=124.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHH-HHHHHHcC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTG-AEWLIKQG 428 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~ 428 (571)
|+||++||.+++.. .|......|+ +||.|+++|+||+|.+.... .......+++.+. +..+.+.-
T Consensus 2 ~~vv~~hG~~~~~~-------~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~~ 67 (251)
T TIGR03695 2 PVLVFLHGFLGSGA-------DWQALIELLG-PHFRCLAIDLPGHGSSQSPD------EIERYDFEEAAQDILATLLDQL 67 (251)
T ss_pred CEEEEEcCCCCchh-------hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCC------ccChhhHHHHHHHHHHHHHHHc
Confidence 67899999766543 3455677777 89999999999998774321 1111223444443 44444432
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc---------------------hhhhhhcC----
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT---------------------FYTEKYMG---- 483 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~~g---- 483 (571)
+.+++.++|||+||.+++.++.++|+.++++++.++...+..... .+...+..
T Consensus 68 --~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 68 --GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLF 145 (251)
T ss_pred --CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCcee
Confidence 557899999999999999999999999999998876543211000 00000000
Q ss_pred -----CCCCChhhh----------------------ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC
Q 008274 484 -----LPSEDPVGY----------------------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536 (571)
Q Consensus 484 -----~~~~~~~~~----------------------~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~ 536 (571)
.+......+ ...+....+.++++|+|+++|++|..++ ... +.+.+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~----~~~~~~~~ 220 (251)
T TIGR03695 146 ASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIA----KEMQKLLP 220 (251)
T ss_pred eecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHH----HHHHhcCC
Confidence 000000000 0012223356788999999999998653 322 33444456
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+.+++.+|++||.+. .++.+.+.+.+.+||+
T Consensus 221 ~~~~~~~~~~gH~~~-~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 221 NLTLVIIANAGHNIH-LENPEAFAKILLAFLE 251 (251)
T ss_pred CCcEEEEcCCCCCcC-ccChHHHHHHHHHHhC
Confidence 789999999999873 4567788888888873
No 85
>PRK06489 hypothetical protein; Provisional
Probab=99.66 E-value=4.1e-15 Score=148.72 Aligned_cols=208 Identities=16% Similarity=0.225 Sum_probs=126.3
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHH-------HhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYL-------RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-------~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 421 (571)
.|.||++||.+++.. .|.. ..+...| ..++|.|+++|+||+|.+..... ..........++++.+.+
T Consensus 69 gpplvllHG~~~~~~---~~~~--~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~-~~~~~~~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGGSGK---SFLS--PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD-GLRAAFPRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCCchh---hhcc--chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc-CCCCCCCcccHHHHHHHH
Confidence 477899999877643 2210 0122222 25789999999999987742110 000001123345555433
Q ss_pred HH-HHHcCCCcCCcEE-EEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc-c----ccc---------------hhh-
Q 008274 422 EW-LIKQGLAKVGHIG-LYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD-G----YDT---------------FYT- 478 (571)
Q Consensus 422 ~~-l~~~~~~d~~~i~-l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~-~----~~~---------------~~~- 478 (571)
.. +.++- +.+++. |+||||||.+++.++.++|++++++|+.++..... . ... .+.
T Consensus 143 ~~~l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PRK06489 143 YRLVTEGL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTT 220 (360)
T ss_pred HHHHHHhc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 33 33432 335664 89999999999999999999999999876532100 0 000 000
Q ss_pred -----h----hh-----------c-CCCC-C----------------Chhhh-------ccCCcchhhccCCCcEEEEec
Q 008274 479 -----E----KY-----------M-GLPS-E----------------DPVGY-------EYSSVMHHVHKMKGKLLLVHG 513 (571)
Q Consensus 479 -----~----~~-----------~-g~~~-~----------------~~~~~-------~~~s~~~~~~~~~~p~lli~G 513 (571)
. .+ . ..+. . ....+ ...+....+.+|++|+|+++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G 300 (360)
T PRK06489 221 QPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINS 300 (360)
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEec
Confidence 0 00 0 0000 0 00001 011223346778999999999
Q ss_pred CCCCCCChHHH--HHHHHHHHHcCCCeeEEEcCCC----CCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 514 MIDENVHFRHT--ARLINALVAARKPYEILIFPDE----RHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 514 ~~D~~v~~~~~--~~~~~~l~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++|..+|++.+ +.+.+.+ .+.+++++|++ ||.+ . ++...+.+.+.+||+++
T Consensus 301 ~~D~~~p~~~~~~~~la~~i----p~a~l~~i~~a~~~~GH~~-~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 301 ADDERNPPETGVMEAALKRV----KHGRLVLIPASPETRGHGT-T-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCCcccChhhHHHHHHHHhC----cCCeEEEECCCCCCCCccc-c-cCHHHHHHHHHHHHHhc
Confidence 99999998865 5565544 45789999996 9987 4 68899999999999864
No 86
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.66 E-value=2.5e-15 Score=151.45 Aligned_cols=206 Identities=17% Similarity=0.121 Sum_probs=123.9
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||.+++.. . |...+..|++ +|.|+++|+||+|.+..... ..... ....+.+.+.+..+.+.
T Consensus 104 ~~p~vvllHG~~~~~~---~----~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~--~~~~~-~~~~~~~~~~i~~~~~~ 172 (402)
T PLN02894 104 DAPTLVMVHGYGASQG---F----FFRNFDALAS-RFRVIAIDQLGWGGSSRPDF--TCKST-EETEAWFIDSFEEWRKA 172 (402)
T ss_pred CCCEEEEECCCCcchh---H----HHHHHHHHHh-CCEEEEECCCCCCCCCCCCc--ccccH-HHHHHHHHHHHHHHHHH
Confidence 4588999999766532 2 2233556655 69999999999988753210 00000 00011122222222222
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc----------c-h--------------------
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----------T-F-------------------- 476 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~----------~-~-------------------- 476 (571)
.+..++.++||||||++++.++.++|++++++|+.+|..-..... . +
T Consensus 173 --l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 250 (402)
T PLN02894 173 --KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIR 250 (402)
T ss_pred --cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHH
Confidence 245689999999999999999999999999988887643110000 0 0
Q ss_pred ------------hhhhhcCC-------CCCChhhh---------------------------ccCCcchhhccCCCcEEE
Q 008274 477 ------------YTEKYMGL-------PSEDPVGY---------------------------EYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 477 ------------~~~~~~g~-------~~~~~~~~---------------------------~~~s~~~~~~~~~~p~ll 510 (571)
+....+.. ..+....+ ...+....+.++++|+++
T Consensus 251 ~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~li 330 (402)
T PLN02894 251 GLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTF 330 (402)
T ss_pred hccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEE
Confidence 00000000 00000000 011112336678899999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++|++|..++ .....+.+.+ +..+++++++++||.. ..++...+.+.+.+|++.+|
T Consensus 331 I~G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~~aGH~~-~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 331 IYGRHDWMNY-EGAVEARKRM---KVPCEIIRVPQGGHFV-FLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred EEeCCCCCCc-HHHHHHHHHc---CCCCcEEEeCCCCCee-eccCHHHHHHHHHHHHHHhc
Confidence 9999998765 5455544433 4568899999999986 55778889999999988764
No 87
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.65 E-value=3.1e-15 Score=151.09 Aligned_cols=196 Identities=16% Similarity=0.161 Sum_probs=127.4
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||.+++.. .|......|.. +|.|+++|+||+|.+.... ......++.+.+..+.+.
T Consensus 131 ~~~vl~~HG~~~~~~-------~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--------~~~~~~~~~~~~~~~~~~- 193 (371)
T PRK14875 131 GTPVVLIHGFGGDLN-------NWLFNHAALAA-GRPVIALDLPGHGASSKAV--------GAGSLDELAAAVLAFLDA- 193 (371)
T ss_pred CCeEEEECCCCCccc-------hHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHh-
Confidence 477889999766543 23444555654 5999999999998764211 112355566655555554
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh----------------hhhhcCCCCCC----
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY----------------TEKYMGLPSED---- 488 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------------~~~~~g~~~~~---- 488 (571)
++..++.++|||+||.+++.++.++|++++++++.+|..........+ ....+..+...
T Consensus 194 -~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (371)
T PRK14875 194 -LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQM 272 (371)
T ss_pred -cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHH
Confidence 355689999999999999999999999999999887653211000000 00000000000
Q ss_pred -------------hhh--------h----ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEc
Q 008274 489 -------------PVG--------Y----EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543 (571)
Q Consensus 489 -------------~~~--------~----~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 543 (571)
... + ...+....+.++++|+|+++|++|..+|+..+..+ ...+++.++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l-------~~~~~~~~~ 345 (371)
T PRK14875 273 VEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL-------PDGVAVHVL 345 (371)
T ss_pred HHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc-------cCCCeEEEe
Confidence 000 0 00122234667889999999999999998765443 235788899
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 544 PDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 544 ~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
|++||.+ ..++...+.+.|.+||+++
T Consensus 346 ~~~gH~~-~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 346 PGAGHMP-QMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CCCCCCh-hhhCHHHHHHHHHHHhccC
Confidence 9999987 4466788889999998753
No 88
>PLN02578 hydrolase
Probab=99.65 E-value=3.6e-15 Score=148.66 Aligned_cols=195 Identities=15% Similarity=0.137 Sum_probs=123.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|......|+ ++|.|+++|+||+|.+........... ..+|+.+.++.+
T Consensus 87 ~~vvliHG~~~~~~-------~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~~~~~~----~a~~l~~~i~~~----- 149 (354)
T PLN02578 87 LPIVLIHGFGASAF-------HWRYNIPELA-KKYKVYALDLLGFGWSDKALIEYDAMV----WRDQVADFVKEV----- 149 (354)
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHh-cCCEEEEECCCCCCCCCCcccccCHHH----HHHHHHHHHHHh-----
Confidence 44688999766432 2344455665 479999999999998764321100000 023444444444
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---------------cc-----c---hh---------
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---------------YD-----T---FY--------- 477 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~---------------~~-----~---~~--------- 477 (571)
..+++.++|||+||++++.++.++|++++++++.++...+.. .. . .+
T Consensus 150 -~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (354)
T PLN02578 150 -VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF 228 (354)
T ss_pred -ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH
Confidence 236799999999999999999999999999988765322110 00 0 00
Q ss_pred --------hhh----hcCCCC--------------CCh---hhh-----------ccCCcchhhccCCCcEEEEecCCCC
Q 008274 478 --------TEK----YMGLPS--------------EDP---VGY-----------EYSSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 478 --------~~~----~~g~~~--------------~~~---~~~-----------~~~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
.+. ....+. .++ +.+ ...+....+.++++|+|+++|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~ 308 (354)
T PLN02578 229 WQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDP 308 (354)
T ss_pred HHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCC
Confidence 000 000000 000 000 0111223456788999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 518 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.++...+..+.+.+ .+.+++.+ ++||.+ ..+....+.+.|.+|++
T Consensus 309 ~v~~~~~~~l~~~~----p~a~l~~i-~~GH~~-~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 309 WVGPAKAEKIKAFY----PDTTLVNL-QAGHCP-HDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCHHHHHHHHHhC----CCCEEEEe-CCCCCc-cccCHHHHHHHHHHHHh
Confidence 99999888776655 45677777 589987 56788889999999986
No 89
>PLN00021 chlorophyllase
Probab=99.64 E-value=1.5e-14 Score=139.40 Aligned_cols=181 Identities=17% Similarity=0.109 Sum_probs=121.2
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccC
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 409 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~ 409 (571)
..+++.++.|... +++|+||++||+..... .|...++.|+++||.|+++|++|.++...
T Consensus 37 ~~~p~~v~~P~~~----g~~PvVv~lHG~~~~~~-------~y~~l~~~Las~G~~VvapD~~g~~~~~~---------- 95 (313)
T PLN00021 37 PPKPLLVATPSEA----GTYPVLLFLHGYLLYNS-------FYSQLLQHIASHGFIVVAPQLYTLAGPDG---------- 95 (313)
T ss_pred CCceEEEEeCCCC----CCCCEEEEECCCCCCcc-------cHHHHHHHHHhCCCEEEEecCCCcCCCCc----------
Confidence 4688899999753 67899999999765422 34556788999999999999997532211
Q ss_pred CCCCchhHHHHHHHHHHc--------CCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCcccccch
Q 008274 410 GRIDAEDQLTGAEWLIKQ--------GLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~--------~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~ 476 (571)
...++|..++++|+.+. ..+|.++++|+|||+||.+++.++.++++ .|++++..+|+.......
T Consensus 96 -~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~-- 172 (313)
T PLN00021 96 -TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK-- 172 (313)
T ss_pred -hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc--
Confidence 11245566666666542 23577899999999999999999998774 578888888875431100
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCC-----C----CChH-HHHHHHHHHHHcCCCeeEEEcCCC
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDE-----N----VHFR-HTARLINALVAARKPYEILIFPDE 546 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~-----~----v~~~-~~~~~~~~l~~~~~~~~~~~~~~~ 546 (571)
...+..+ .. .....++..|+|++++..|. . .|.. +..++++.+ ..+..+.+.+++
T Consensus 173 ---------~~~p~il-~~--~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~---~~~~~~~~~~~~ 237 (313)
T PLN00021 173 ---------QTPPPVL-TY--APHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNEC---KAPAVHFVAKDY 237 (313)
T ss_pred ---------CCCCccc-cc--CcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhc---CCCeeeeeecCC
Confidence 0000000 00 01123367899999999763 2 2233 336666655 567888899999
Q ss_pred CCC
Q 008274 547 RHM 549 (571)
Q Consensus 547 ~H~ 549 (571)
||.
T Consensus 238 gH~ 240 (313)
T PLN00021 238 GHM 240 (313)
T ss_pred Ccc
Confidence 996
No 90
>PRK11071 esterase YqiA; Provisional
Probab=99.64 E-value=4.2e-15 Score=133.39 Aligned_cols=174 Identities=17% Similarity=0.110 Sum_probs=111.1
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
|.||++||.+++.. .|.. ..+...+.+ .+|.|+++|+||++ ++..+.+..+.++
T Consensus 2 p~illlHGf~ss~~---~~~~--~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~ 57 (190)
T PRK11071 2 STLLYLHGFNSSPR---SAKA--TLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLE 57 (190)
T ss_pred CeEEEECCCCCCcc---hHHH--HHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHH
Confidence 67999999776644 2321 123455554 38999999999762 1233444444443
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCC---CC------Chhh---hccC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP---SE------DPVG---YEYS 495 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~---~~------~~~~---~~~~ 495 (571)
. +.+++.++|+|+||++++.++.++|. + +|+.+|..+... ....+.+.. .. .... ....
T Consensus 58 ~--~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 128 (190)
T PRK11071 58 H--GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFE----LLTDYLGENENPYTGQQYVLESRHIYDLKVM 128 (190)
T ss_pred c--CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHH----HHHHhcCCcccccCCCcEEEcHHHHHHHHhc
Confidence 2 34689999999999999999999884 3 456666554210 001111110 00 0011 1111
Q ss_pred CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 496 SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 496 s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+.. +. ..+|++++||++|++||++.+.++++. ++.+++++++|.+.. .+...+.+.+||.
T Consensus 129 ~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~-------~~~~~~~ggdH~f~~---~~~~~~~i~~fl~ 189 (190)
T PRK11071 129 QIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-------CRQTVEEGGNHAFVG---FERYFNQIVDFLG 189 (190)
T ss_pred CCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-------cceEEECCCCcchhh---HHHhHHHHHHHhc
Confidence 1111 22 457899999999999999999999884 255678999999943 4778899999975
No 91
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.63 E-value=5.4e-15 Score=139.76 Aligned_cols=189 Identities=10% Similarity=0.042 Sum_probs=118.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|...+..| .+|.|+++|+||+|.+..... ..+++..+.+..++++.
T Consensus 3 p~vvllHG~~~~~~-------~w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~---------~~~~~~~~~l~~~l~~~- 63 (242)
T PRK11126 3 PWLVFLHGLLGSGQ-------DWQPVGEAL--PDYPRLYIDLPGHGGSAAISV---------DGFADVSRLLSQTLQSY- 63 (242)
T ss_pred CEEEEECCCCCChH-------HHHHHHHHc--CCCCEEEecCCCCCCCCCccc---------cCHHHHHHHHHHHHHHc-
Confidence 67899999877643 344456666 379999999999998753211 12344444444444432
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCccCCccccc---------chhhh------------hhc-----
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDGYD---------TFYTE------------KYM----- 482 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~---------~~~~~------------~~~----- 482 (571)
+.+++.++||||||.+++.++.++|+ +++++++.++........ ..+.. .++
T Consensus 64 -~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (242)
T PRK11126 64 -NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVF 142 (242)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchh
Confidence 45789999999999999999999865 488888876543211000 00000 000
Q ss_pred C-CCCCChhhhc----------------------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 483 G-LPSEDPVGYE----------------------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 483 g-~~~~~~~~~~----------------------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
. ........+. ..+....+.++++|+|+++|++|..+. .+.+. .+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-----~~~~ 212 (242)
T PRK11126 143 ASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-----LALP 212 (242)
T ss_pred hccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-----hcCe
Confidence 0 0000000000 001123456788999999999998542 22221 2678
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++++++||.+ ..++.+.+.+.+.+||.+
T Consensus 213 ~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 213 LHVIPNAGHNA-HRENPAAFAASLAQILRL 241 (242)
T ss_pred EEEeCCCCCch-hhhChHHHHHHHHHHHhh
Confidence 99999999987 457788999999999875
No 92
>PRK07581 hypothetical protein; Validated
Probab=99.63 E-value=6.7e-15 Score=146.30 Aligned_cols=229 Identities=10% Similarity=0.046 Sum_probs=133.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHH---H
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA---S 404 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~---~ 404 (571)
+|.++++..+.+.. +.+.|+||++||.+++.. .|.... .....|...+|.|+++|+||+|.+...... .
T Consensus 24 ~~~~l~y~~~G~~~----~~~~~~vll~~~~~~~~~---~~~~~~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 95 (339)
T PRK07581 24 PDARLAYKTYGTLN----AAKDNAILYPTWYSGTHQ---DNEWLI-GPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPF 95 (339)
T ss_pred CCceEEEEecCccC----CCCCCEEEEeCCCCCCcc---cchhhc-cCCCccCcCceEEEEecCCCCCCCCCCCCCCCCC
Confidence 44556555444321 123477787787665432 121000 001245567999999999999977532110 0
Q ss_pred HhccCCCCCc-hhHHHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc-----------
Q 008274 405 IKHNCGRIDA-EDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD----------- 471 (571)
Q Consensus 405 ~~~~~~~~~~-~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~----------- 471 (571)
....+....+ +|+.+....+.+.- ..+++ .|+||||||++++.++.++|++++++|+.++.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~l--gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~ 173 (339)
T PRK07581 96 NAARFPHVTIYDNVRAQHRLLTEKF--GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLK 173 (339)
T ss_pred CCCCCCceeHHHHHHHHHHHHHHHh--CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHH
Confidence 0001001112 33443333344432 34674 789999999999999999999999988775432100
Q ss_pred -------c-----cc-----------c-h----hhhhhcCCC------C-----------------CChhhh-------c
Q 008274 472 -------G-----YD-----------T-F----YTEKYMGLP------S-----------------EDPVGY-------E 493 (571)
Q Consensus 472 -------~-----~~-----------~-~----~~~~~~g~~------~-----------------~~~~~~-------~ 493 (571)
. +. . . +...++... . .++..+ .
T Consensus 174 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 253 (339)
T PRK07581 174 AALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQ 253 (339)
T ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhh
Confidence 0 00 0 0 000000000 0 000000 0
Q ss_pred ------c----CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC-CCCCCCCCCcHHHHHHH
Q 008274 494 ------Y----SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD-ERHMPRRHRDRIYMEER 562 (571)
Q Consensus 494 ------~----~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~ 562 (571)
. .+....+.++++|+|+++|++|..+++..+..+.+.+ .+.+++++++ +||.. ..++..++...
T Consensus 254 ~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i----p~a~l~~i~~~~GH~~-~~~~~~~~~~~ 328 (339)
T PRK07581 254 RGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI----PNAELRPIESIWGHLA-GFGQNPADIAF 328 (339)
T ss_pred hcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC----CCCeEEEeCCCCCccc-cccCcHHHHHH
Confidence 0 0122345678899999999999999999888877665 4468889999 89976 44667788899
Q ss_pred HHHHHHHhC
Q 008274 563 IWEFIERTL 571 (571)
Q Consensus 563 i~~fl~~~l 571 (571)
+.+||++.|
T Consensus 329 ~~~~~~~~~ 337 (339)
T PRK07581 329 IDAALKELL 337 (339)
T ss_pred HHHHHHHHH
Confidence 999998764
No 93
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.63 E-value=1.2e-15 Score=144.74 Aligned_cols=216 Identities=19% Similarity=0.255 Sum_probs=114.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCce-----------eecccccccchhhhHHHHhCCcEE
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQ-----------LVCDSWINTVDMRAQYLRSKGILV 386 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~-----------~~~~~~~~~~~~~~~~l~~~G~~v 386 (571)
..|.+.|...++..++++++.|++. .++.|+||++||.++.. .+.+.+...-..++..|+++||+|
T Consensus 87 ~~EKv~f~~~p~~~vpaylLvPd~~---~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVv 163 (390)
T PF12715_consen 87 TREKVEFNTTPGSRVPAYLLVPDGA---KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVV 163 (390)
T ss_dssp EEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEE
T ss_pred EEEEEEEEccCCeeEEEEEEecCCC---CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEE
Confidence 5688899988999999999999874 26899999999943322 111112222233578999999999
Q ss_pred EEECCCCCCCChhhh---------HHHH---hccCC----CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 387 WKLDNRGTARRGLKF---------EASI---KHNCG----RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 387 ~~~d~rG~~~~~~~~---------~~~~---~~~~~----~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
+++|.+|.|.++..- .... ...+| ....-|...+++||.+++.+|++||+++|+||||+.++++
T Consensus 164 la~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L 243 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL 243 (390)
T ss_dssp EEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH
Confidence 999999987654310 0011 11111 1234567779999999999999999999999999999999
Q ss_pred HhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCC-------------hhhhccCCcchhhccCC-CcEEEEecCCC
Q 008274 451 LARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED-------------PVGYEYSSVMHHVHKMK-GKLLLVHGMID 516 (571)
Q Consensus 451 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~s~~~~~~~~~-~p~lli~G~~D 516 (571)
++. .++++++|+.+-+..+..- ...+..+..+ +..+...+-..-+.-+. .|+|++.|..|
T Consensus 244 aAL-DdRIka~v~~~~l~~~~~~-----~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~D 317 (390)
T PF12715_consen 244 AAL-DDRIKATVANGYLCTTQER-----ALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKD 317 (390)
T ss_dssp HHH--TT--EEEEES-B--HHHH-----HHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-H
T ss_pred HHc-chhhHhHhhhhhhhccchh-----hHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcc
Confidence 986 4677887766543321100 0011111110 11111111111222222 59999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 517 ENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 517 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
..++. .+..++.. .++-++++..||.
T Consensus 318 klf~i--V~~AY~~~-~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 318 KLFPI--VRRAYAIM-GAPDNFQIHHYPK 343 (390)
T ss_dssp HHHHH--HHHHHHHT-T-GGGEEE---GG
T ss_pred cccHH--HHHHHHhc-CCCcceEEeeccc
Confidence 87654 22233222 2235788888886
No 94
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.63 E-value=7.6e-16 Score=143.58 Aligned_cols=179 Identities=20% Similarity=0.260 Sum_probs=118.0
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCc
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAK 431 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 431 (571)
||++||.+++.. .|..++..| ++||.|+++|+||+|.+..... ......++..+.+..+++.- .
T Consensus 1 vv~~hG~~~~~~-------~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~l~~~l~~~--~ 64 (228)
T PF12697_consen 1 VVFLHGFGGSSE-------SWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPD------YSPYSIEDYAEDLAELLDAL--G 64 (228)
T ss_dssp EEEE-STTTTGG-------GGHHHHHHH-HTTSEEEEEECTTSTTSSSHSS------GSGGSHHHHHHHHHHHHHHT--T
T ss_pred eEEECCCCCCHH-------HHHHHHHHH-hCCCEEEEEecCCccccccccc------cCCcchhhhhhhhhhccccc--c
Confidence 689999877643 345567778 4899999999999987764221 11122344444444444432 2
Q ss_pred CCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc------chhh--------------hhhcC--CCCCCh
Q 008274 432 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------TFYT--------------EKYMG--LPSEDP 489 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------~~~~--------------~~~~g--~~~~~~ 489 (571)
.+++.++|||+||.+++.++.++|++++++++.+|........ .... ...+. ......
T Consensus 65 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (228)
T PF12697_consen 65 IKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEP 144 (228)
T ss_dssp TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccc
Confidence 3689999999999999999999999999999999887532110 0000 00000 000000
Q ss_pred --------hh--------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 490 --------VG--------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 490 --------~~--------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
.. ....+....+.++++|+++++|++|..++.+....+.+.+ .+++++++|++||.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 145 EDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVVIPGAGHFL 217 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEETTSSSTH
T ss_pred cccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCcc
Confidence 00 0122333567788999999999999999977666665543 578999999999986
No 95
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.62 E-value=1.3e-15 Score=140.59 Aligned_cols=178 Identities=23% Similarity=0.183 Sum_probs=119.9
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc---
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ--- 427 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--- 427 (571)
||++|||++....... ...++..++ +.|+.|+.+|||-..... ....++|+.++++|+.++
T Consensus 1 v~~~HGGg~~~g~~~~----~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----------~p~~~~D~~~a~~~l~~~~~~ 65 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES----HWPFAARLAAERGFVVVSIDYRLAPEAP-----------FPAALEDVKAAYRWLLKNADK 65 (211)
T ss_dssp EEEE--STTTSCGTTT----HHHHHHHHHHHHTSEEEEEE---TTTSS-----------TTHHHHHHHHHHHHHHHTHHH
T ss_pred CEEECCcccccCChHH----HHHHHHHHHhhccEEEEEeecccccccc-----------ccccccccccceeeecccccc
Confidence 7899999887542222 233455566 499999999999654321 112378999999999987
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCC----CeeEEEEEcCccCCc-ccccchh--------------------hhhhc
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFP----DVFQCAVSGAPVTSW-DGYDTFY--------------------TEKYM 482 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~~~~~~v~~~~~~~~-~~~~~~~--------------------~~~~~ 482 (571)
..+|.++|+|+|+|.||.+++.++.... ..++++++.+|+.++ ......+ .+.+.
T Consensus 66 ~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (211)
T PF07859_consen 66 LGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYL 145 (211)
T ss_dssp HTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHH
T ss_pred ccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccc
Confidence 3468999999999999999999886422 248999999998876 2111111 01111
Q ss_pred CCCCCChhhhccCCcchhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
+ .........+|+.. ..++ +|++|++|+.|..+ .++..++++|++.|++++++++++..|.+
T Consensus 146 ~---~~~~~~~~~sp~~~-~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 146 P---GSDRDDPLASPLNA-SDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp S---TGGTTSTTTSGGGS-SCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred c---cccccccccccccc-cccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 1 01111223455544 2333 59999999999875 58899999999999999999999999986
No 96
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.62 E-value=4.4e-14 Score=132.34 Aligned_cols=211 Identities=16% Similarity=0.106 Sum_probs=134.5
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
.+.++.+.|. +.++++.|.+. ++.|+||++||.+.... .+...+...++.|+++||.|+.+|+||+|.+...
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~~----~~~~~VlllHG~g~~~~---~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~ 73 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVAV----GPRGVVIYLPPFAEEMN---KSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGD 73 (266)
T ss_pred CEEecCCCCc-EEEEEecCCCC----CCceEEEEECCCccccc---chhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCc
Confidence 3566666665 56777777642 35689999999654322 1222344567889999999999999999877543
Q ss_pred hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhh-
Q 008274 401 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE- 479 (571)
Q Consensus 401 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~- 479 (571)
........ ..+|+.++++++.+.. ..+++|+||||||.+++.++.++|+.++++|+.+|+..-..+...+..
T Consensus 74 ~~~~~~~~----~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl 146 (266)
T TIGR03101 74 FAAARWDV----WKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRL 146 (266)
T ss_pred cccCCHHH----HHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHH
Confidence 32111111 2578888898887653 468999999999999999999999999999999998764332221100
Q ss_pred ----hhc-CCCCCChh----hhccC----------Cc--chhhcc--------CCCcEEEEecCCC-CCCChHHHHHHHH
Q 008274 480 ----KYM-GLPSEDPV----GYEYS----------SV--MHHVHK--------MKGKLLLVHGMID-ENVHFRHTARLIN 529 (571)
Q Consensus 480 ----~~~-g~~~~~~~----~~~~~----------s~--~~~~~~--------~~~p~lli~G~~D-~~v~~~~~~~~~~ 529 (571)
+.+ +....... ..... +| ...+++ -..++|++.-.-+ ..-......++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 226 (266)
T TIGR03101 147 RLVARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGE 226 (266)
T ss_pred HHHHHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHH
Confidence 001 11100000 00000 00 001111 1347788876433 2223456788899
Q ss_pred HHHHcCCCeeEEEcCCC
Q 008274 530 ALVAARKPYEILIFPDE 546 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~ 546 (571)
++++.|+.++...|++.
T Consensus 227 ~~~~~g~~v~~~~~~~~ 243 (266)
T TIGR03101 227 QWVQSGVEVTVDLVPGP 243 (266)
T ss_pred HHHHcCCeEeeeecCCc
Confidence 99999999999999997
No 97
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.62 E-value=1.5e-14 Score=144.32 Aligned_cols=234 Identities=15% Similarity=0.084 Sum_probs=140.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc----cccchhhh---HHHHhCCcEEEEECCCC--CCCCh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW----INTVDMRA---QYLRSKGILVWKLDNRG--TARRG 398 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~----~~~~~~~~---~~l~~~G~~v~~~d~rG--~~~~~ 398 (571)
+|.++.+..+.+.+. ...|.||++||.+++....... ...|.... ..|...+|.|+++|+|| +|.++
T Consensus 14 ~~~~~~y~~~g~~~~----~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 14 SDVRVAYETYGTLNA----ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred CCceEEEEeccccCC----CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC
Confidence 556777777765321 1236889999976653211000 00122221 24557899999999999 33333
Q ss_pred hhhH-HHH--h-ccCCCCCchhHHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc
Q 008274 399 LKFE-ASI--K-HNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 399 ~~~~-~~~--~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (571)
..-. ... . .+.....++|+.+.+..+++.- ..++ +.++||||||.+++.++.++|++++++|+.++.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAW 167 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHH
Confidence 2100 000 0 0111234667776666666543 3456 999999999999999999999999998887765321100
Q ss_pred cch-----------------------------h-----------------hhhhcCCC-CC-----------Chhhh---
Q 008274 474 DTF-----------------------------Y-----------------TEKYMGLP-SE-----------DPVGY--- 492 (571)
Q Consensus 474 ~~~-----------------------------~-----------------~~~~~g~~-~~-----------~~~~~--- 492 (571)
... + ...+.... .. ..+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
T TIGR01392 168 CIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRY 247 (351)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHH
Confidence 000 0 00000000 00 00001
Q ss_pred ---------------------ccCC-------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE-Ec
Q 008274 493 ---------------------EYSS-------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL-IF 543 (571)
Q Consensus 493 ---------------------~~~s-------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~-~~ 543 (571)
...+ ....+.+|++|+|+++|++|..+|+..++.+.+.+......++++ ++
T Consensus 248 ~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~ 327 (351)
T TIGR01392 248 QGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIE 327 (351)
T ss_pred HHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeC
Confidence 0000 123456788999999999999999999999999887654444443 45
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 544 PDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 544 ~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+++||.. ..+..+.+.+.+.+||+
T Consensus 328 ~~~GH~~-~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 328 SPYGHDA-FLVETDQVEELIRGFLR 351 (351)
T ss_pred CCCCcch-hhcCHHHHHHHHHHHhC
Confidence 7899987 44678888999999974
No 98
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=1.2e-14 Score=140.37 Aligned_cols=196 Identities=15% Similarity=0.132 Sum_probs=124.1
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.... .|......|. ++|.|+++|+||+|.+..... .....+++.+.+..++++-
T Consensus 35 ~~iv~lHG~~~~~~-------~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~~~~~- 98 (286)
T PRK03204 35 PPILLCHGNPTWSF-------LYRDIIVALR-DRFRCVAPDYLGFGLSERPSG-------FGYQIDEHARVIGEFVDHL- 98 (286)
T ss_pred CEEEEECCCCccHH-------HHHHHHHHHh-CCcEEEEECCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHh-
Confidence 67888999764321 3444555665 469999999999987753210 1123566777777666653
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC-Cccc-----cc---------------chhhhhhcCC-C--
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT-SWDG-----YD---------------TFYTEKYMGL-P-- 485 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~-~~~~-----~~---------------~~~~~~~~g~-~-- 485 (571)
+.+++.++||||||.+++.++..+|++++++|..++.. .... +. ..+.++++.. +
T Consensus 99 -~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (286)
T PRK03204 99 -GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEH 177 (286)
T ss_pred -CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccC
Confidence 45689999999999999999999999999988766542 1000 00 0001111100 0
Q ss_pred CCC---hhhhccC--------------------C-cchhh----cc--CCCcEEEEecCCCCCCChH-HHHHHHHHHHHc
Q 008274 486 SED---PVGYEYS--------------------S-VMHHV----HK--MKGKLLLVHGMIDENVHFR-HTARLINALVAA 534 (571)
Q Consensus 486 ~~~---~~~~~~~--------------------s-~~~~~----~~--~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~ 534 (571)
... ...+... . .+..+ .+ +++|+|+++|++|..+++. ..+.+.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i--- 254 (286)
T PRK03204 178 RPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF--- 254 (286)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc---
Confidence 000 0011000 0 00001 11 1689999999999988655 345555544
Q ss_pred CCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
.+.++++++++||.+ ..+..+.+.+.+.+||
T Consensus 255 -p~~~~~~i~~aGH~~-~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 255 -PDHVLVELPNAKHFI-QEDAPDRIAAAIIERF 285 (286)
T ss_pred -CCCeEEEcCCCcccc-cccCHHHHHHHHHHhc
Confidence 567899999999997 5578889999999987
No 99
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.61 E-value=5.8e-15 Score=146.66 Aligned_cols=177 Identities=15% Similarity=0.128 Sum_probs=112.3
Q ss_pred HHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCC
Q 008274 378 YLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 378 ~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
.|...+|.|+++|+||+|.+... .....+..+.+..+++.- +.++ +.++||||||++++.++.++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~~----------~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA~~~A~~~P~ 161 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLDV----------PIDTADQADAIALLLDAL--GIARLHAFVGYSYGALVGLQFASRHPA 161 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCCC----------CCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHHHHHHHHChH
Confidence 34456899999999998755211 111333333333343332 3334 5799999999999999999999
Q ss_pred eeEEEEEcCccCCcccccch--------------------------------------hhhhhcCCCC-------CChh-
Q 008274 457 VFQCAVSGAPVTSWDGYDTF--------------------------------------YTEKYMGLPS-------EDPV- 490 (571)
Q Consensus 457 ~~~~~v~~~~~~~~~~~~~~--------------------------------------~~~~~~g~~~-------~~~~- 490 (571)
+++++|+.++.......... +...+...+. ....
T Consensus 162 ~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T PRK08775 162 RVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAED 241 (343)
T ss_pred hhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHH
Confidence 99999988765321100000 0000000000 0000
Q ss_pred --------hhccCCc-------------chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC-CCC
Q 008274 491 --------GYEYSSV-------------MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD-ERH 548 (571)
Q Consensus 491 --------~~~~~s~-------------~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H 548 (571)
.....++ ...+.++++|+|+++|++|..+|++....+.+.+ ..+.+++++++ +||
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i---~p~a~l~~i~~~aGH 318 (343)
T PRK08775 242 YLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGL---GPRGSLRVLRSPYGH 318 (343)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHc---CCCCeEEEEeCCccH
Confidence 0000000 0124577899999999999999999888887765 34678999985 999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHh
Q 008274 549 MPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 549 ~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.. ..+..+.+.+.+.+||++.
T Consensus 319 ~~-~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 319 DA-FLKETDRIDAILTTALRST 339 (343)
T ss_pred HH-HhcCHHHHHHHHHHHHHhc
Confidence 87 4577889999999999763
No 100
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.61 E-value=7.8e-14 Score=139.26 Aligned_cols=194 Identities=20% Similarity=0.184 Sum_probs=139.9
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|++.|-++-..+.+ .........+.|+||++.+++..-......+||+.|+++|+..++...... +
T Consensus 173 ~~l~~~D~dg~~~~~l---------~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~---~ 240 (425)
T COG0823 173 YELALGDYDGYNQQKL---------TDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGN---N 240 (425)
T ss_pred ceEEEEccCCcceeEe---------cccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCc---c
Confidence 4566666664443443 234556677999999998877754443336899999999998777653221 1
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
..+ .|++|+ ++|.++++|-.+||++|+.+++.++||.+.-....+ .|+|||++|+|.+++.+. .+|
T Consensus 241 ~~P---------~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~P-s~spdG~~ivf~Sdr~G~--p~I 308 (425)
T COG0823 241 GAP---------AFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSP-SWSPDGSKIVFTSDRGGR--PQI 308 (425)
T ss_pred CCc---------cCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCc-cCCCCCCEEEEEeCCCCC--cce
Confidence 112 445554 889999999999999999999999999876544444 599999999999999886 699
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCceE-EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKGKH-VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g~~-~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
|++++ +|. ..+++|...+.. ...+||||++++|....... -.+...++.++..++.++..
T Consensus 309 ~~~~~--~g~----~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~-~~i~~~~~~~~~~~~~lt~~ 369 (425)
T COG0823 309 YLYDL--EGS----QVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQ-WDIDKNDLASGGKIRILTST 369 (425)
T ss_pred EEECC--CCC----ceeEeeccCCCCcCccCCCCCCEEEEEeccCCc-eeeEEeccCCCCcEEEcccc
Confidence 99998 665 667888765433 55999999999998754222 45666666556545555543
No 101
>COG0400 Predicted esterase [General function prediction only]
Probab=99.61 E-value=2.2e-14 Score=127.90 Aligned_cols=182 Identities=18% Similarity=0.126 Sum_probs=124.8
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCC-------chhHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID-------AEDQLT 419 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~-------~~D~~~ 419 (571)
...|+||++||.+++.. ++.+ ..+.+.. .+.++.+..+-.-..+..|. .....+..+ ...+.+
T Consensus 16 p~~~~iilLHG~Ggde~---~~~~----~~~~~~P-~~~~is~rG~v~~~g~~~~f--~~~~~~~~d~edl~~~~~~~~~ 85 (207)
T COG0400 16 PAAPLLILLHGLGGDEL---DLVP----LPELILP-NATLVSPRGPVAENGGPRFF--RRYDEGSFDQEDLDLETEKLAE 85 (207)
T ss_pred CCCcEEEEEecCCCChh---hhhh----hhhhcCC-CCeEEcCCCCccccCcccce--eecCCCccchhhHHHHHHHHHH
Confidence 45689999999665532 2211 2333333 36666654332111111111 111112222 233555
Q ss_pred HHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcch
Q 008274 420 GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMH 499 (571)
Q Consensus 420 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~ 499 (571)
+++.+.++..+|.+|++++|+|.||.+++.+..++|..|+++++.+|...... .
T Consensus 86 ~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~-------------~------------- 139 (207)
T COG0400 86 FLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP-------------E------------- 139 (207)
T ss_pred HHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC-------------c-------------
Confidence 66666666778999999999999999999999999999999999988653210 0
Q ss_pred hhc-cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 500 HVH-KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 500 ~~~-~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
... .-.+|+|++||+.|++||...+.++.+.|++.|.+++...++ .||.+. ....+.+.+|+...
T Consensus 140 ~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~-----~e~~~~~~~wl~~~ 205 (207)
T COG0400 140 LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP-----PEELEAARSWLANT 205 (207)
T ss_pred cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC-----HHHHHHHHHHHHhc
Confidence 111 224799999999999999999999999999999999999999 799982 34456777888765
No 102
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.61 E-value=3.1e-14 Score=141.85 Aligned_cols=223 Identities=17% Similarity=0.174 Sum_probs=138.6
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR 411 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~ 411 (571)
+..+.|.|... ...+.| ||++||-.......+. .....++..|+++||.|+++|+||.+.+.... ...+
T Consensus 48 ~~l~~~~~~~~--~~~~~p-vl~v~~~~~~~~~~d~--~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~------~~~d 116 (350)
T TIGR01836 48 VVLYRYTPVKD--NTHKTP-LLIVYALVNRPYMLDL--QEDRSLVRGLLERGQDVYLIDWGYPDRADRYL------TLDD 116 (350)
T ss_pred EEEEEecCCCC--cCCCCc-EEEeccccccceeccC--CCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC------CHHH
Confidence 44455666532 112345 6778984322221111 12345689999999999999999876432211 1111
Q ss_pred CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-----------------
Q 008274 412 IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----------------- 474 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~----------------- 474 (571)
....|+.++++++.++. ...++.++|||+||.+++.+++.+|+.++++++.++..+.....
T Consensus 117 ~~~~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 194 (350)
T TIGR01836 117 YINGYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVD 194 (350)
T ss_pred HHHHHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHH
Confidence 11245778888888764 34689999999999999999999999999999888766532110
Q ss_pred ------chh--------------hhhhcCCCC--CCh---hhh--------------------------ccCC-------
Q 008274 475 ------TFY--------------TEKYMGLPS--EDP---VGY--------------------------EYSS------- 496 (571)
Q Consensus 475 ------~~~--------------~~~~~g~~~--~~~---~~~--------------------------~~~s------- 496 (571)
..+ ...+..... .+. +.| ....
T Consensus 195 ~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~ 274 (350)
T TIGR01836 195 TMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVE 274 (350)
T ss_pred hcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeE
Confidence 000 000000000 000 000 0000
Q ss_pred ---cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC--CCCCcHHHHHHHHHHHHHHh
Q 008274 497 ---VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP--RRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 497 ---~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl~~~ 570 (571)
....+.++++|+|+++|++|..++++.+..+++.+.. .+.+++++++ ||.. ......+.+++.+.+||+++
T Consensus 275 ~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 275 IGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred ECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcCC-CCEEEEECchhHhhhhHHHHHHHHhC
Confidence 0112556789999999999999999999988887632 4678888885 6653 23334788999999999864
No 103
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.61 E-value=5e-14 Score=130.55 Aligned_cols=202 Identities=16% Similarity=0.141 Sum_probs=131.0
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCC----chhHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID----AEDQLTGAE 422 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~----~~D~~~~~~ 422 (571)
+.-|+|+++||-|.... .|+.....|+++||.|+++|.||.|.+...-. ..... ..|+...++
T Consensus 42 ~~gP~illlHGfPe~wy-------swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~------~~~Yt~~~l~~di~~lld 108 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWY-------SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPH------ISEYTIDELVGDIVALLD 108 (322)
T ss_pred CCCCEEEEEccCCccch-------hhhhhhhhhhhcceEEEecCCCCCCCCCCCCC------cceeeHHHHHHHHHHHHH
Confidence 34599999999777643 34556788999999999999999987653211 11112 344555555
Q ss_pred HHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc----------cc-cchh---------hh---
Q 008274 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD----------GY-DTFY---------TE--- 479 (571)
Q Consensus 423 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~----------~~-~~~~---------~~--- 479 (571)
.|. -+|+.++||++||.+|..++..+|+++++.|..+...... .+ ...| .+
T Consensus 109 ~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~ 182 (322)
T KOG4178|consen 109 HLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETEL 182 (322)
T ss_pred Hhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhh
Confidence 542 5799999999999999999999999999998876544310 00 0000 00
Q ss_pred ------h----hc----C----CC---CCC--------hhhh-------------------ccCC--cchhhccCCCcEE
Q 008274 480 ------K----YM----G----LP---SED--------PVGY-------------------EYSS--VMHHVHKMKGKLL 509 (571)
Q Consensus 480 ------~----~~----g----~~---~~~--------~~~~-------------------~~~s--~~~~~~~~~~p~l 509 (571)
. +. + .+ ..+ .+.| ..+. ......+++.|++
T Consensus 183 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~ 262 (322)
T KOG4178|consen 183 SKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVL 262 (322)
T ss_pred ccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceE
Confidence 0 00 0 00 000 0000 0011 1233556788999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++.|+.|.+.+...-.+.+++... ...+.++++++||.. ..++...+.+.+++||++.
T Consensus 263 fi~G~~D~v~~~p~~~~~~rk~vp--~l~~~vv~~~~gH~v-qqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 263 FIWGDLDPVLPYPIFGELYRKDVP--RLTERVVIEGIGHFV-QQEKPQEVNQAILGFINSF 320 (322)
T ss_pred EEEecCcccccchhHHHHHHHhhc--cccceEEecCCcccc-cccCHHHHHHHHHHHHHhh
Confidence 999999999887633333333211 223678999999988 5688899999999999874
No 104
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.60 E-value=3.6e-14 Score=142.51 Aligned_cols=236 Identities=15% Similarity=0.074 Sum_probs=141.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc------cccchhhh---HHHHhCCcEEEEECCCCC-CCC
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW------INTVDMRA---QYLRSKGILVWKLDNRGT-ARR 397 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~------~~~~~~~~---~~l~~~G~~v~~~d~rG~-~~~ 397 (571)
+|..+.+..+...+. ...|.||++||.+++......+ ...|...+ ..+...+|.|+++|++|+ +++
T Consensus 31 ~~~~~~y~~~G~~~~----~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTLNA----DRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEeccccCC----CCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCC
Confidence 344555555543211 2248899999987765311000 00122221 133367999999999984 333
Q ss_pred -hhhhHH----HHh-ccCCCCCchhHHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 398 -GLKFEA----SIK-HNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 398 -~~~~~~----~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+..... ..+ .......++|+.+.+..+++.- ..++ +.++||||||.+++.++.++|++++++|+.++....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 211000 000 0111234666666666666543 3456 589999999999999999999999998887754321
Q ss_pred ccccc--------------h---------------------------h------hhhhcCC-----C--C----CChhhh
Q 008274 471 DGYDT--------------F---------------------------Y------TEKYMGL-----P--S----EDPVGY 492 (571)
Q Consensus 471 ~~~~~--------------~---------------------------~------~~~~~g~-----~--~----~~~~~~ 492 (571)
..... . + ...+... + . ...+.+
T Consensus 185 ~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 264 (379)
T PRK00175 185 SAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESY 264 (379)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHH
Confidence 10000 0 0 0000000 0 0 000000
Q ss_pred ---------ccCC-----------------------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 493 ---------EYSS-----------------------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 493 ---------~~~s-----------------------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
...+ ....+.+|++|+|+++|++|..+|++.++.+.+.+...+..+++
T Consensus 265 l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l 344 (379)
T PRK00175 265 LRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSY 344 (379)
T ss_pred HHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEE
Confidence 0000 12335678899999999999999999999999999877777788
Q ss_pred EEcC-CCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 541 LIFP-DERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 541 ~~~~-~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++++ ++||.. ..+..+.+.+.+.+||.+.
T Consensus 345 ~~i~~~~GH~~-~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 345 AEIDSPYGHDA-FLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred EEeCCCCCchh-HhcCHHHHHHHHHHHHHhh
Confidence 8775 999987 4467778999999999764
No 105
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=9.6e-14 Score=133.29 Aligned_cols=239 Identities=16% Similarity=0.097 Sum_probs=158.9
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCC--CCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRY--GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 393 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~--~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 393 (571)
....++..++.+||-.+...++.+..... ++...|+||++||-.+++. + .....++..+.++||.|+.+|.||
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~--~---~YVr~lv~~a~~~G~r~VVfN~RG 164 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSH--E---SYVRHLVHEAQRKGYRVVVFNHRG 164 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCCh--h---HHHHHHHHHHHhCCcEEEEECCCC
Confidence 44567788888899888888886655321 1245699999999766644 1 233455677778999999999999
Q ss_pred CCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCc
Q 008274 394 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSW 470 (571)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~ 470 (571)
.+++.-. ..+-+.....+|+.++++++.++. ...++..+|.||||.+...++.+.. .+.+|++..+|+--.
T Consensus 165 ~~g~~Lt----Tpr~f~ag~t~Dl~~~v~~i~~~~--P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~ 238 (409)
T KOG1838|consen 165 LGGSKLT----TPRLFTAGWTEDLREVVNHIKKRY--PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL 238 (409)
T ss_pred CCCCccC----CCceeecCCHHHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh
Confidence 7765311 111222234789999999999874 3458999999999999999998743 345555555554311
Q ss_pred --------cc----ccc--------------------------------------hhhhhhcCCCCCChhhhccCCcchh
Q 008274 471 --------DG----YDT--------------------------------------FYTEKYMGLPSEDPVGYEYSSVMHH 500 (571)
Q Consensus 471 --------~~----~~~--------------------------------------~~~~~~~g~~~~~~~~~~~~s~~~~ 500 (571)
.. |+. .+....+|.+. ..+.|.+.|+...
T Consensus 239 ~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~-~deYY~~aSs~~~ 317 (409)
T KOG1838|consen 239 AASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS-VDEYYKKASSSNY 317 (409)
T ss_pred hhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc-HHHHHhhcchhhh
Confidence 00 000 00001112221 3466888999999
Q ss_pred hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC-CC--CCcHHHHHHH-HHHHHHH
Q 008274 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP-RR--HRDRIYMEER-IWEFIER 569 (571)
Q Consensus 501 ~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~-~~--~~~~~~~~~~-i~~fl~~ 569 (571)
+++|+.|+|+|++.+|+++|.. +.-. ....++.++-+++-.-+||-- .. ..+...+.++ +.+|+.+
T Consensus 318 v~~I~VP~L~ina~DDPv~p~~-~ip~--~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 318 VDKIKVPLLCINAADDPVVPEE-AIPI--DDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred cccccccEEEEecCCCCCCCcc-cCCH--HHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 9999999999999999999874 2111 122335788888888889953 11 1144555555 8888765
No 106
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.59 E-value=9.2e-15 Score=131.06 Aligned_cols=181 Identities=18% Similarity=0.115 Sum_probs=122.5
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCc-eEEEEEcCCCCceeeccc-ccccchhhhHHHHhCCcEEEEECCCC-CCCChhhhHH
Q 008274 327 NDGTVLYGALYKPDESRYGPPPY-KTLISVYGGPCVQLVCDS-WINTVDMRAQYLRSKGILVWKLDNRG-TARRGLKFEA 403 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~-P~vv~~hGg~~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~rG-~~~~~~~~~~ 403 (571)
.-|.+|.+.+|.|++.. +++++ |+|+|+||++........ -....-..+...-+-+|-|++|.|-- ...+..
T Consensus 169 ~tgneLkYrly~Pkdy~-pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~---- 243 (387)
T COG4099 169 STGNELKYRLYTPKDYA-PDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE---- 243 (387)
T ss_pred ccCceeeEEEecccccC-CCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc----
Confidence 35788999999998874 44666 999999997554321100 00000000111113345566665321 011110
Q ss_pred HHhccCCCCCchhHHHHHH-HHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhc
Q 008274 404 SIKHNCGRIDAEDQLTGAE-WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM 482 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 482 (571)
.........+.+++ -+.+++.||.+||-++|.|+||+++..++.++|+.|+|++.++|--+.
T Consensus 244 -----~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------ 306 (387)
T COG4099 244 -----KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------ 306 (387)
T ss_pred -----ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------------
Confidence 00111333455555 677788999999999999999999999999999999999998875321
Q ss_pred CCCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
..+++.++ .|+.++|+.+|.++|.+++.-+++.|+..+.++.+..|.
T Consensus 307 ---------------v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 307 ---------------VYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred ---------------hhhhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 12344444 699999999999999999999999999988888777766
No 107
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.58 E-value=5e-14 Score=139.81 Aligned_cols=215 Identities=12% Similarity=0.076 Sum_probs=134.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.++..+.+....+ ...|.||++||.+.+.. .|...+..|++ +|.|+++|+||+|.+......
T Consensus 112 ~~~~~~~y~~~G~-------~~~~~ivllHG~~~~~~-------~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~--- 173 (383)
T PLN03084 112 SDLFRWFCVESGS-------NNNPPVLLIHGFPSQAY-------SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPG--- 173 (383)
T ss_pred CCceEEEEEecCC-------CCCCeEEEECCCCCCHH-------HHHHHHHHHhc-CCEEEEECCCCCCCCCCCccc---
Confidence 4666665443221 23478899999876543 34455666764 899999999999877532110
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--cc---chh----
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--YD---TFY---- 477 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--~~---~~~---- 477 (571)
......++++.+.+..++++- ..+++.|+|||+||.+++.++.++|++++++|+.++...... .. ..+
T Consensus 174 -~~~~ys~~~~a~~l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l 250 (383)
T PLN03084 174 -YGFNYTLDEYVSSLESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFL 250 (383)
T ss_pred -ccccCCHHHHHHHHHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHH
Confidence 001223455555555554442 345799999999999999999999999999999887642110 00 000
Q ss_pred -h-----------hhhcC--CCC----CChhhhc------------------cC-Ccc----hhh------ccCCCcEEE
Q 008274 478 -T-----------EKYMG--LPS----EDPVGYE------------------YS-SVM----HHV------HKMKGKLLL 510 (571)
Q Consensus 478 -~-----------~~~~g--~~~----~~~~~~~------------------~~-s~~----~~~------~~~~~p~ll 510 (571)
. ...+. .+. +....|. .. ..+ ..+ .+++.|+|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLi 330 (383)
T PLN03084 251 LGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITV 330 (383)
T ss_pred hhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEE
Confidence 0 00000 000 0000000 00 000 001 246889999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|+.|..++.+..+.+++. .+.++.++|++||.+ ..+..+.+.+.|.+||.
T Consensus 331 I~G~~D~~v~~~~~~~~a~~-----~~a~l~vIp~aGH~~-~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 331 CWGLRDRWLNYDGVEDFCKS-----SQHKLIELPMAGHHV-QEDCGEELGGIISGILS 382 (383)
T ss_pred EeeCCCCCcCHHHHHHHHHh-----cCCeEEEECCCCCCc-chhCHHHHHHHHHHHhh
Confidence 99999999998877666653 256889999999987 55788899999999986
No 108
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.57 E-value=1.1e-13 Score=128.53 Aligned_cols=220 Identities=16% Similarity=0.199 Sum_probs=134.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
++..+...-..+.. +..+-+|++||-+.+.. .|.. ....|++ ...|.++|.+|.|.+.+..-..
T Consensus 74 ~~~~iw~~~~~~~~-----~~~~plVliHGyGAg~g---~f~~----Nf~~La~-~~~vyaiDllG~G~SSRP~F~~--- 137 (365)
T KOG4409|consen 74 NGIEIWTITVSNES-----ANKTPLVLIHGYGAGLG---LFFR----NFDDLAK-IRNVYAIDLLGFGRSSRPKFSI--- 137 (365)
T ss_pred CCceeEEEeecccc-----cCCCcEEEEeccchhHH---HHHH----hhhhhhh-cCceEEecccCCCCCCCCCCCC---
Confidence 44445444444443 33445566899555433 2322 2345555 8999999999999876432111
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc---------c------
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---------G------ 472 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---------~------ 472 (571)
+ .......+++.++.....- ...++.|+|||+|||++..+|.+||++++.+|+.+|..--. .
T Consensus 138 d-~~~~e~~fvesiE~WR~~~--~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~ 214 (365)
T KOG4409|consen 138 D-PTTAEKEFVESIEQWRKKM--GLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWY 214 (365)
T ss_pred C-cccchHHHHHHHHHHHHHc--CCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHH
Confidence 1 1111223444444333322 34689999999999999999999999999999998853100 0
Q ss_pred ---------ccchhhhhhcC-----------------CCCCCh----------------------------hhhccCCcc
Q 008274 473 ---------YDTFYTEKYMG-----------------LPSEDP----------------------------VGYEYSSVM 498 (571)
Q Consensus 473 ---------~~~~~~~~~~g-----------------~~~~~~----------------------------~~~~~~s~~ 498 (571)
+.+...-|.+| .|.... -.+++...+
T Consensus 215 ~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~ 294 (365)
T KOG4409|consen 215 KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMI 294 (365)
T ss_pred hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHH
Confidence 00000001111 110000 011222233
Q ss_pred hhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 499 HHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 499 ~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.+..++ +|+++|+|+.|.+ ....+..+...+ ....++.+++|++||.. ..++.+.+.+.+.+++++.
T Consensus 295 ~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~--~~~~~~~~~v~~aGHhv-ylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 295 QRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSL--MKEYVEIIIVPGAGHHV-YLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHhhccCCCEEEEecCcccc-cchhHHHHHHHh--hcccceEEEecCCCcee-ecCCHHHHHHHHHHHHhcc
Confidence 4455566 8999999999875 455666666655 34568999999999987 4578889999999988763
No 109
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.57 E-value=4.7e-14 Score=128.77 Aligned_cols=157 Identities=25% Similarity=0.343 Sum_probs=97.1
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC-cccc---c------chhhh---h
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-WDGY---D------TFYTE---K 480 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~-~~~~---~------~~~~~---~ 480 (571)
++-+.++++||.+++.++.++|+|+|.|.||-+|+.+++.+| .++++|+.+|..- +... . ..... .
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 455789999999999999999999999999999999999998 6799998877432 1100 0 00000 0
Q ss_pred h-c---CCCC-----CChhhhccCCcchhhccCCCcEEEEecCCCCCCChH-HHHHHHHHHHHcCCC--eeEEEcCCCCC
Q 008274 481 Y-M---GLPS-----EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR-HTARLINALVAARKP--YEILIFPDERH 548 (571)
Q Consensus 481 ~-~---g~~~-----~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H 548 (571)
. . +... .....-......-.++++++|+|+++|++|...|-. .+..+.++|++++.+ ++++.||++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH 161 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGH 161 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S
T ss_pred ceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCc
Confidence 0 0 0000 000000011112347888999999999999999854 566777889888854 88899999999
Q ss_pred CCCCC---------------------------CcHHHHHHHHHHHHHHhC
Q 008274 549 MPRRH---------------------------RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 549 ~~~~~---------------------------~~~~~~~~~i~~fl~~~l 571 (571)
.+..+ ...++.++++++||+++|
T Consensus 162 ~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 162 LIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp ---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred eecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 86321 145778999999999987
No 110
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.56 E-value=4.7e-13 Score=128.13 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=121.6
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||...+.. .|..+...|.+.||.|+++|+||+|.+..... ....+++..+.+..+++.
T Consensus 17 ~~p~vvliHG~~~~~~-------~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-------~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 17 QPPHFVLIHGISGGSW-------CWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-------SVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred CCCeEEEECCCCCCcC-------cHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-------cCCCHHHHHHHHHHHHHh
Confidence 4588999999766532 35556788888999999999999986431100 012244444444433333
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc--hhhh------h---h----cC---------
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT--FYTE------K---Y----MG--------- 483 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~------~---~----~g--------- 483 (571)
-. ..+++.++||||||.+++.++.++|++++++|..++......+.. .+.. . . .+
T Consensus 83 l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T PLN02211 83 LP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTS 161 (273)
T ss_pred cC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCce
Confidence 11 246899999999999999999999999999888765432100000 0000 0 0 00
Q ss_pred ---------------CCCCChh---hhcc---CCcc------hhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 484 ---------------LPSEDPV---GYEY---SSVM------HHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 484 ---------------~~~~~~~---~~~~---~s~~------~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
.+..... .... ...+ ....++ +.|+++|.|++|..+|++..+.|.+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~--- 238 (273)
T PLN02211 162 AIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP--- 238 (273)
T ss_pred eeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC---
Confidence 0000000 0000 0001 112234 5799999999999999998888887652
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
..+++.++ +||.. ..+....+.+.|.+...
T Consensus 239 -~~~~~~l~-~gH~p-~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 239 -PSQVYELE-SDHSP-FFSTPFLLFGLLIKAAA 268 (273)
T ss_pred -ccEEEEEC-CCCCc-cccCHHHHHHHHHHHHH
Confidence 23677776 79986 34666666666666543
No 111
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.52 E-value=6.4e-13 Score=128.94 Aligned_cols=204 Identities=19% Similarity=0.227 Sum_probs=130.5
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+..|.||++||...+.. .| +.....|.+ .|+.|+++|.+|.|.++..-.. ....+.+....+..+.
T Consensus 56 ~~~~pvlllHGF~~~~~---~w----~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~------~~y~~~~~v~~i~~~~ 122 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSF---SW----RRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG------PLYTLRELVELIRRFV 122 (326)
T ss_pred CCCCcEEEeccccCCcc---cH----hhhccccccccceEEEEEecCCCCcCCCCCCC------CceehhHHHHHHHHHH
Confidence 35678888999655432 33 334444543 3799999999997643321111 1133556666665555
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEE---EcCccCCccccc---------------------------c
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV---SGAPVTSWDGYD---------------------------T 475 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v---~~~~~~~~~~~~---------------------------~ 475 (571)
.+.. ..++.++|||+||.++..+|+.+|+.++..+ ...+........ .
T Consensus 123 ~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 200 (326)
T KOG1454|consen 123 KEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVR 200 (326)
T ss_pred Hhhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchh
Confidence 5432 3459999999999999999999999999988 444332110000 0
Q ss_pred hhhhhhc------C-CCC---C--------------Chh----hh---cc--CCcchhhccCC-CcEEEEecCCCCCCCh
Q 008274 476 FYTEKYM------G-LPS---E--------------DPV----GY---EY--SSVMHHVHKMK-GKLLLVHGMIDENVHF 521 (571)
Q Consensus 476 ~~~~~~~------g-~~~---~--------------~~~----~~---~~--~s~~~~~~~~~-~p~lli~G~~D~~v~~ 521 (571)
.+.+... . .+. + ..+ .+ .. ......+.++. +|+|+++|++|..+|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~ 280 (326)
T KOG1454|consen 201 LVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPL 280 (326)
T ss_pred heeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCH
Confidence 0000000 0 000 0 000 00 00 23334566676 8999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.+..+.+.+ .++++.+++++||... .+..+.+.+.|..|+.++
T Consensus 281 ~~~~~~~~~~----pn~~~~~I~~~gH~~h-~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 281 ELAEELKKKL----PNAELVEIPGAGHLPH-LERPEEVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHhhC----CCceEEEeCCCCcccc-cCCHHHHHHHHHHHHHHh
Confidence 9777766554 7789999999999984 488999999999999875
No 112
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.51 E-value=1.2e-11 Score=127.10 Aligned_cols=191 Identities=19% Similarity=0.162 Sum_probs=135.2
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
...|+++|.++++.+.+.. .......+.|||||+.+++...+. +...|+++|+++|+.+.+.......
T Consensus 169 ~~~l~~~d~~g~~~~~l~~---------~~~~~~~p~~Spdg~~la~~~~~~-~~~~i~v~d~~~g~~~~~~~~~~~~-- 236 (417)
T TIGR02800 169 RYELQVADYDGANPQTITR---------SREPILSPAWSPDGQKLAYVSFES-GKPEIYVQDLATGQREKVASFPGMN-- 236 (417)
T ss_pred cceEEEEcCCCCCCEEeec---------CCCceecccCCCCCCEEEEEEcCC-CCcEEEEEECCCCCEEEeecCCCCc--
Confidence 4579999998887777743 334566789999999999887554 3467999999999877765432110
Q ss_pred eccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
+.+ .|++|+ +++.+..+|..+||++++.+++.++|+........+ .|++||++|+|.+++.+. .+
T Consensus 237 -----~~~-----~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~-~~s~dg~~l~~~s~~~g~--~~ 303 (417)
T TIGR02800 237 -----GAP-----AFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEP-SWSPDGKSIAFTSDRGGS--PQ 303 (417)
T ss_pred -----cce-----EECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCE-EECCCCCEEEEEECCCCC--ce
Confidence 111 344554 777777778889999999988888888754333333 599999999999987664 68
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
||.+++ .+. ..++++... ....+.+||||+++++..... ....++++++.++. .+.+.
T Consensus 304 iy~~d~--~~~----~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~-~~~~i~~~d~~~~~-~~~l~ 362 (417)
T TIGR02800 304 IYMMDA--DGG----EVRRLTFRGGYNASPSWSPDGDLIAFVHREG-GGFNIAVMDLDGGG-ERVLT 362 (417)
T ss_pred EEEEEC--CCC----CEEEeecCCCCccCeEECCCCCEEEEEEccC-CceEEEEEeCCCCC-eEEcc
Confidence 999998 443 455666433 334568999999999876543 33578999986644 34444
No 113
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.50 E-value=5.7e-13 Score=115.46 Aligned_cols=170 Identities=18% Similarity=0.193 Sum_probs=128.0
Q ss_pred chhhhHHHHhCCcEEEEECCC-C---CCC-ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHH
Q 008274 372 VDMRAQYLRSKGILVWKLDNR-G---TAR-RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYL 446 (571)
Q Consensus 372 ~~~~~~~l~~~G~~v~~~d~r-G---~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 446 (571)
.+..+..++..||.|+.||+- | +.. .-.+......+.......+|+...+++|+.++ +..+|+++|.++||-+
T Consensus 56 ~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~ 133 (242)
T KOG3043|consen 56 TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKV 133 (242)
T ss_pred HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceE
Confidence 345688889999999999974 4 111 11122233334444556789999999999776 6789999999999999
Q ss_pred HHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHH
Q 008274 447 SAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 447 a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~ 526 (571)
+..+....| .|.++++..|..- + ...+.++++|+|++.|+.|..+|+....+
T Consensus 134 vv~~~~~~~-~f~a~v~~hps~~--------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~ 185 (242)
T KOG3043|consen 134 VVTLSAKDP-EFDAGVSFHPSFV--------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKA 185 (242)
T ss_pred EEEeeccch-hheeeeEecCCcC--------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHH
Confidence 998888766 7788887655321 0 23467888999999999999999999988
Q ss_pred HHHHHHHcCC-CeeEEEcCCCCCCCCC-------C---CcHHHHHHHHHHHHHHhC
Q 008274 527 LINALVAARK-PYEILIFPDERHMPRR-------H---RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 527 ~~~~l~~~~~-~~~~~~~~~~~H~~~~-------~---~~~~~~~~~i~~fl~~~l 571 (571)
+-++|..... ..++.+|++.+|++.. + ...+..++.+++||++++
T Consensus 186 ~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 186 WEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred HHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 8888877643 4578999999999842 1 234667888999999875
No 114
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.48 E-value=1.1e-12 Score=130.66 Aligned_cols=233 Identities=15% Similarity=0.145 Sum_probs=145.2
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc-----cc-chh---hhHHHHhCCcEEEEECCCCCCCC---
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI-----NT-VDM---RAQYLRSKGILVWKLDNRGTARR--- 397 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-----~~-~~~---~~~~l~~~G~~v~~~d~rG~~~~--- 397 (571)
.+|.+..|-..+. .+-++||++|+-.++......+. .. |.. ....+--.-|-||++|..|++.+
T Consensus 41 ~~~~Y~t~G~ln~----~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 41 VQMGYETYGTLNR----AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred ceEEEEeccccCC----CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 4566666665442 34589999999766543211110 01 110 12233345699999999987531
Q ss_pred -----hhhhHHHHh-----ccCCCCCchhHHHHHHHHHHcCCCcCCcEE-EEeechHHHHHHHHHhcCCCeeEEEEEcCc
Q 008274 398 -----GLKFEASIK-----HNCGRIDAEDQLTGAEWLIKQGLAKVGHIG-LYGWSYGGYLSAITLARFPDVFQCAVSGAP 466 (571)
Q Consensus 398 -----~~~~~~~~~-----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~ 466 (571)
|..-.+... .+.....+.|+.+.+..++++- .-+++. ++||||||.+++.++.++|++++.+|.++.
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l--gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL--GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 111100100 0233356788888887777653 345675 999999999999999999999999888754
Q ss_pred cCC---cc--cc----------c--------------------------------chhhhhhcCC------CC------C
Q 008274 467 VTS---WD--GY----------D--------------------------------TFYTEKYMGL------PS------E 487 (571)
Q Consensus 467 ~~~---~~--~~----------~--------------------------------~~~~~~~~g~------~~------~ 487 (571)
... +. .+ + .++.+++... +. .
T Consensus 195 ~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~ 274 (389)
T PRK06765 195 NPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLT 274 (389)
T ss_pred CCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchh
Confidence 211 10 00 0 0000010000 00 0
Q ss_pred Chhhhcc---------C----------------------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC
Q 008274 488 DPVGYEY---------S----------------------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536 (571)
Q Consensus 488 ~~~~~~~---------~----------------------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~ 536 (571)
..+.|.. . +....+.++++|+|+++|+.|..+|++.++.+.+.+...+.
T Consensus 275 ~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~ 354 (389)
T PRK06765 275 SFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGK 354 (389)
T ss_pred hHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCC
Confidence 0011100 0 22334567889999999999999999999999998876667
Q ss_pred CeeEEEcCC-CCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 537 PYEILIFPD-ERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 537 ~~~~~~~~~-~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++++++++ +||.. ..+....+.+.+.+||++
T Consensus 355 ~a~l~~I~s~~GH~~-~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 355 YAEVYEIESINGHMA-GVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CeEEEEECCCCCcch-hhcCHHHHHHHHHHHHcc
Confidence 899999986 89986 446788899999999975
No 115
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.48 E-value=1.2e-12 Score=118.80 Aligned_cols=232 Identities=15% Similarity=0.080 Sum_probs=141.4
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC-CCCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR-GTARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r-G~~~~ 397 (571)
.+..+|.. .+...++++|.|...+ ++.|+||.+||+.++........ .| -......||.|+.||.- ++-.-
T Consensus 35 ~~~~s~~~-~g~~r~y~l~vP~g~~---~~apLvv~LHG~~~sgag~~~~s-g~---d~lAd~~gFlV~yPdg~~~~wn~ 106 (312)
T COG3509 35 SSVASFDV-NGLKRSYRLYVPPGLP---SGAPLVVVLHGSGGSGAGQLHGT-GW---DALADREGFLVAYPDGYDRAWNA 106 (312)
T ss_pred CCcccccc-CCCccceEEEcCCCCC---CCCCEEEEEecCCCChHHhhccc-ch---hhhhcccCcEEECcCccccccCC
Confidence 34445554 5677899999999863 34499999999877655333322 22 23444689999999632 22101
Q ss_pred hhhhHH--HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-c-
Q 008274 398 GLKFEA--SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-Y- 473 (571)
Q Consensus 398 ~~~~~~--~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~-~- 473 (571)
...+.. ......+..++..+.+.+..++.+..||+.||.|.|.|.||.|+.++++.+|++|.++..+++.....- .
T Consensus 107 ~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~ 186 (312)
T COG3509 107 NGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACT 186 (312)
T ss_pred CcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccC
Confidence 111111 112233445566778888888888899999999999999999999999999999999888887652100 0
Q ss_pred --cchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH------------------
Q 008274 474 --DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA------------------ 533 (571)
Q Consensus 474 --~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~------------------ 533 (571)
...-..+.-|.+ +|..-...=..| |.+|..|..|...+..+....+..
T Consensus 187 ~~rp~~~m~~~G~~----------Dp~~p~~gG~~~--~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~ 254 (312)
T COG3509 187 PPRPVSVMAFHGTA----------DPLNPYHGGGVP--IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTD 254 (312)
T ss_pred CCCchhHHHhcCCC----------CCCCCCCCCCcc--cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccce
Confidence 000000111211 111111111123 788888887754444443333321
Q ss_pred -----cCCCeeEEEcCCCCCCCCCCCc-----------HHHHHHHHHHHHHHh
Q 008274 534 -----ARKPYEILIFPDERHMPRRHRD-----------RIYMEERIWEFIERT 570 (571)
Q Consensus 534 -----~~~~~~~~~~~~~~H~~~~~~~-----------~~~~~~~i~~fl~~~ 570 (571)
.+..+++..+.+.||.+..... -.+..+.|.+||..+
T Consensus 255 ~~~~~~~~~V~~y~i~g~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~ 307 (312)
T COG3509 255 YDTCDGNARVELYTIDGGGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQH 307 (312)
T ss_pred eeccCCCcceEEEEEeCCcccCcCCCCCCcccccccccCcchHHHHHHHHHhc
Confidence 1247888899999998732111 233567788888764
No 116
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.47 E-value=3.6e-12 Score=127.51 Aligned_cols=205 Identities=15% Similarity=0.115 Sum_probs=128.4
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC----cEEEEECC
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG----ILVWKLDN 391 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~ 391 (571)
...+.+.+.+. -|.+...++|.|+++. ++++|||+++||...... .........|.+.| .+++.+|.
T Consensus 178 g~~~~~~~~S~~Lg~~r~v~VY~P~~y~--~~~~PvlyllDG~~w~~~------~~~~~~ld~li~~g~i~P~ivV~id~ 249 (411)
T PRK10439 178 SPAKEIIWKSERLGNSRRVWIYTTGDAA--PEERPLAILLDGQFWAES------MPVWPALDSLTHRGQLPPAVYLLIDA 249 (411)
T ss_pred CceEEEEEEccccCCceEEEEEECCCCC--CCCCCEEEEEECHHhhhc------CCHHHHHHHHHHcCCCCceEEEEECC
Confidence 34455666653 4677889999998763 468999999999654322 11222355666666 45788886
Q ss_pred CCCCCChhhhHHHHhccCCCCCchhH-HHHHHHHHHcC--CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 392 RGTARRGLKFEASIKHNCGRIDAEDQ-LTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 392 rG~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
........+... ... ..+.+ .+.+-++.++. ..|+++.+|+|+||||+.|+.++.++|++|.++++.+|..
T Consensus 250 ~~~~~R~~el~~--~~~----f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 250 IDTTHRSQELPC--NAD----FWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CCcccccccCCc--hHH----HHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 432212111100 000 01122 23334444442 2478899999999999999999999999999999999864
Q ss_pred CcccccchhhhhhcCCCCCChhhhccCCcchh--hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCC
Q 008274 469 SWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHH--VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 546 (571)
Q Consensus 469 ~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~--~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 546 (571)
-|.... + .....+.+ .+.. ...-..+++|-+|+.|... ...+.++.+.|+++|.++++.++++
T Consensus 324 ww~~~~--------~---~~~~~l~~--~l~~~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G- 388 (411)
T PRK10439 324 WWPHRG--------G---QQEGVLLE--QLKAGEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG- 388 (411)
T ss_pred ecCCcc--------C---CchhHHHH--HHHhcccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-
Confidence 332100 0 00000100 0000 1111236888899988644 5678999999999999999999998
Q ss_pred CCCC
Q 008274 547 RHMP 550 (571)
Q Consensus 547 ~H~~ 550 (571)
||..
T Consensus 389 GHd~ 392 (411)
T PRK10439 389 GHDA 392 (411)
T ss_pred CcCH
Confidence 7975
No 117
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.46 E-value=9.2e-13 Score=112.90 Aligned_cols=212 Identities=17% Similarity=0.169 Sum_probs=139.4
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.++...+..+.+.+..- +..-++|++||.-.... ...+...+..+++.||.++.+|++|.|.+
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh~t-------gs~e~vvlcHGfrS~Kn-----~~~~~~vA~~~e~~gis~fRfDF~GnGeS 76 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLHET-------GSTEIVVLCHGFRSHKN-----AIIMKNVAKALEKEGISAFRFDFSGNGES 76 (269)
T ss_pred eeeEEEeccCCCchhhcceecc-------CCceEEEEeeccccccc-----hHHHHHHHHHHHhcCceEEEEEecCCCCc
Confidence 4556777777776666644332 34468999999544322 11245568888899999999999999988
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---- 473 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---- 473 (571)
...|..-. +...++|+...++++... +.---+|+|||-||.+++..+.++++ +.-++..+|-.+....
T Consensus 77 ~gsf~~Gn----~~~eadDL~sV~q~~s~~---nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eR 148 (269)
T KOG4667|consen 77 EGSFYYGN----YNTEADDLHSVIQYFSNS---NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINER 148 (269)
T ss_pred CCccccCc----ccchHHHHHHHHHHhccC---ceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhh
Confidence 76654322 233468999999998663 22234689999999999999999887 4566777765554321
Q ss_pred -cchhhhhhc--CC---CC---CChhhhccCCcc--------hhhccC--CCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 474 -DTFYTEKYM--GL---PS---EDPVGYEYSSVM--------HHVHKM--KGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 474 -~~~~~~~~~--g~---~~---~~~~~~~~~s~~--------~~~~~~--~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
...+.++.+ |. +. .-...+...|.. ....+| +||+|-+||..|.+||.+.+.++++.+.
T Consensus 149 lg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-- 226 (269)
T KOG4667|consen 149 LGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-- 226 (269)
T ss_pred hcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc--
Confidence 111222211 11 11 001111111111 112223 5899999999999999999999999873
Q ss_pred CCCeeEEEcCCCCCCCCCC
Q 008274 535 RKPYEILIFPDERHMPRRH 553 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~ 553 (571)
+.++.++|++.|.+...
T Consensus 227 --nH~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 227 --NHKLEIIEGADHNYTGH 243 (269)
T ss_pred --CCceEEecCCCcCccch
Confidence 37889999999998543
No 118
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.45 E-value=2.4e-12 Score=149.97 Aligned_cols=211 Identities=16% Similarity=0.147 Sum_probs=131.2
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||.+++.. . |...+..|.+ +|.|+++|+||+|.+................++++.+.+..++++
T Consensus 1370 ~~~~vVllHG~~~s~~---~----w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~ 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE---D----WIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH 1441 (1655)
T ss_pred CCCeEEEECCCCCCHH---H----HHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH
Confidence 3478999999877643 2 3445566654 699999999999876532110000000112345555555544443
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----------c---c--------hhhhhhcCC--
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY----------D---T--------FYTEKYMGL-- 484 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~----------~---~--------~~~~~~~g~-- 484 (571)
- ..+++.|+||||||.+++.++.++|++++++++.++...+... . . .+...++..
T Consensus 1442 l--~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 1519 (1655)
T PLN02980 1442 I--TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGEL 1519 (1655)
T ss_pred h--CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHH
Confidence 2 4568999999999999999999999999998887654221100 0 0 000000000
Q ss_pred ---CCC---------------Chhh----hc------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC-
Q 008274 485 ---PSE---------------DPVG----YE------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR- 535 (571)
Q Consensus 485 ---~~~---------------~~~~----~~------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~- 535 (571)
... +... +. ..+....+.++++|+|+++|++|..++ ..+.++.+.+.+..
T Consensus 1520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~ 1598 (1655)
T PLN02980 1520 WKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKE 1598 (1655)
T ss_pred hhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccc
Confidence 000 0000 00 011123467788999999999999774 66667776664321
Q ss_pred -------CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 536 -------KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 536 -------~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..++++++|++||.. ..++...+.+.+.+||.+.
T Consensus 1599 ~~~~~~~~~a~lvvI~~aGH~~-~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1599 SGNDKGKEIIEIVEIPNCGHAV-HLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred ccccccccceEEEEECCCCCch-HHHCHHHHHHHHHHHHHhc
Confidence 136899999999987 4577888999999999763
No 119
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.42 E-value=6.4e-12 Score=126.08 Aligned_cols=216 Identities=21% Similarity=0.286 Sum_probs=148.1
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhh---HHHHhCCcEEEEECCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA---QYLRSKGILVWKLDNRG 393 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~---~~l~~~G~~v~~~d~rG 393 (571)
...+.+.++..||.+|...+|.|++. ++.|+++..+-.|....... +..... .. ..++.+||+||..|.||
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~-~~~~~~-~~p~~~~~aa~GYavV~qDvRG 90 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGT-FGPQLS-ALPQPAWFAAQGYAVVNQDVRG 90 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeecccccccccc-Ccchhh-cccccceeecCceEEEEecccc
Confidence 35567899999999999999999874 68999998884444332101 111111 12 26889999999999999
Q ss_pred CCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-
Q 008274 394 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG- 472 (571)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~- 472 (571)
.++|.+.+..... .+.+|-.+.|+|+.++++.+ .+|+++|.||+|+..+++|+.+|.-.+|++...+..|...
T Consensus 91 ~~~SeG~~~~~~~-----~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d 164 (563)
T COG2936 91 RGGSEGVFDPESS-----REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRD 164 (563)
T ss_pred cccCCcccceecc-----ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccccccc
Confidence 9999877754433 25899999999999999855 6899999999999999999998888899998887765210
Q ss_pred -----------ccchhh-----------------------------------hhhcCCCCC--------Ch-hhhccCCc
Q 008274 473 -----------YDTFYT-----------------------------------EKYMGLPSE--------DP-VGYEYSSV 497 (571)
Q Consensus 473 -----------~~~~~~-----------------------------------~~~~g~~~~--------~~-~~~~~~s~ 497 (571)
+...|. +...+.|+. .. ..|.+.+-
T Consensus 165 ~~~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~~~~~ 244 (563)
T COG2936 165 DAFYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWRRGDR 244 (563)
T ss_pred ccccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhhccCc
Confidence 000000 000011111 00 12333455
Q ss_pred chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 498 MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 498 ~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.....+++.|+|.+.|=.|...+ .+.+++..++.+ +..+++=|- .|.
T Consensus 245 ~~d~~~i~vP~L~i~gW~D~~l~--~~~~~~~~~~~r--~~~lvvgPw-~H~ 291 (563)
T COG2936 245 VADLSKIKVPALVIGGWSDGYLH--TAIKLFAFLRSR--PVKLVVGPW-THG 291 (563)
T ss_pred ccccccCCCcEEEEccccccccc--chHHHhhhcccC--CceeEEccc-ccC
Confidence 55678889999999999998544 556666666543 455555554 554
No 120
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.42 E-value=4e-13 Score=127.62 Aligned_cols=205 Identities=17% Similarity=0.166 Sum_probs=119.4
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCC-CCceeecccccccchhhhHHHHhCC----cEEEEECCCCCCCChhhhHH
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGG-PCVQLVCDSWINTVDMRAQYLRSKG----ILVWKLDNRGTARRGLKFEA 403 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~rG~~~~~~~~~~ 403 (571)
|.....++|.|+++ ...+++|||+++||. .... .+ ........+.+.| .++|+++..+.......+..
T Consensus 5 g~~~~~~VylP~~y-~~~~~~PvlylldG~~~~~~----~~--~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~ 77 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-DPSKPYPVLYLLDGQSGWFR----NG--NAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYL 77 (251)
T ss_dssp TEEEEEEEEECTTG-GTTTTEEEEEEESHTTHHHH----HH--HHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTS
T ss_pred CCeEEEEEEECCCC-CCCCCCEEEEEccCCccccc----cc--hHHHHHHHHHHhCCCCceEEEEEeccccccccccccc
Confidence 56789999999986 455899999999994 1111 11 1111233334443 45566655443311101100
Q ss_pred H------HhccCCCCCchh-H-HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc
Q 008274 404 S------IKHNCGRIDAED-Q-LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT 475 (571)
Q Consensus 404 ~------~~~~~~~~~~~D-~-~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 475 (571)
. .....+.....+ + .+.+.++.++..+++.+.+|+|+||||+.|+.++.++|+.|.++++.+|..+.. ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~--~~ 155 (251)
T PF00756_consen 78 PAGSSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS--PS 155 (251)
T ss_dssp SBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT--HC
T ss_pred ccccccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc--cc
Confidence 0 000000001122 2 245666666665666669999999999999999999999999999999886543 11
Q ss_pred hhhhhhcCCCCCChhhhccCCcchhhc-----cCCCcEEEEecCCCCCCC----------hHHHHHHHHHHHHcCCCeeE
Q 008274 476 FYTEKYMGLPSEDPVGYEYSSVMHHVH-----KMKGKLLLVHGMIDENVH----------FRHTARLINALVAARKPYEI 540 (571)
Q Consensus 476 ~~~~~~~g~~~~~~~~~~~~s~~~~~~-----~~~~p~lli~G~~D~~v~----------~~~~~~~~~~l~~~~~~~~~ 540 (571)
.|.. .+...|...++..... .-..++++..|+.|.... .....++.+.|...+.+..+
T Consensus 156 ~w~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 228 (251)
T PF00756_consen 156 LWGP-------SDDEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTY 228 (251)
T ss_dssp HHHH-------STCGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTES
T ss_pred ccCc-------CCcHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceE
Confidence 1211 1223333444443331 123578999999998432 12333444455556788888
Q ss_pred EEcCCCCCCC
Q 008274 541 LIFPDERHMP 550 (571)
Q Consensus 541 ~~~~~~~H~~ 550 (571)
..++ ++|..
T Consensus 229 ~~~~-G~H~~ 237 (251)
T PF00756_consen 229 HVFP-GGHDW 237 (251)
T ss_dssp EEEH-SESSH
T ss_pred EEec-Cccch
Confidence 8888 47764
No 121
>PRK05855 short chain dehydrogenase; Validated
Probab=99.39 E-value=5.4e-12 Score=135.65 Aligned_cols=216 Identities=15% Similarity=0.055 Sum_probs=120.8
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
..+|..+++..+.+. ..|.||++||.+.+.. .|......| ..||.|+++|+||+|.+......
T Consensus 9 ~~~g~~l~~~~~g~~-------~~~~ivllHG~~~~~~-------~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~-- 71 (582)
T PRK05855 9 SSDGVRLAVYEWGDP-------DRPTVVLVHGYPDNHE-------VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRT-- 71 (582)
T ss_pred eeCCEEEEEEEcCCC-------CCCeEEEEcCCCchHH-------HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcc--
Confidence 347888887765432 2478999999876543 234456666 67899999999999877532110
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCcc-CCcc------cc---
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPV-TSWD------GY--- 473 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~-~~~~------~~--- 473 (571)
......++.+.+..+.+.-. ...++.|+||||||.+++.++.+. +.++...+..++. .+.. ..
T Consensus 72 ----~~~~~~~~a~dl~~~i~~l~-~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (582)
T PRK05855 72 ----AAYTLARLADDFAAVIDAVS-PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRP 146 (582)
T ss_pred ----cccCHHHHHHHHHHHHHHhC-CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhccccc
Confidence 01123333333333333211 123499999999999998777652 3333333322211 1000 00
Q ss_pred ------------cc-hh------------------h---hhhc----CCCCCC-------------hhhhcc----CCcc
Q 008274 474 ------------DT-FY------------------T---EKYM----GLPSED-------------PVGYEY----SSVM 498 (571)
Q Consensus 474 ------------~~-~~------------------~---~~~~----g~~~~~-------------~~~~~~----~s~~ 498 (571)
.. .+ . .+.. ..+... ...+.. ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (582)
T PRK05855 147 TPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSR 226 (582)
T ss_pred chhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhcc
Confidence 00 00 0 0000 000000 000000 0000
Q ss_pred hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 499 ~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.....+++|+|+++|++|..+++.....+.+.+ ...++.+++ +||... .+....+.+.+.+|+.+
T Consensus 227 ~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 227 PRERYTDVPVQLIVPTGDPYVRPALYDDLSRWV----PRLWRREIK-AGHWLP-MSHPQVLAAAVAEFVDA 291 (582)
T ss_pred CccCCccCceEEEEeCCCcccCHHHhccccccC----CcceEEEcc-CCCcch-hhChhHHHHHHHHHHHh
Confidence 113347899999999999999988877766543 345666665 689873 56677888999999875
No 122
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.39 E-value=4.2e-12 Score=110.28 Aligned_cols=228 Identities=18% Similarity=0.170 Sum_probs=146.9
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
..++..||..+.+..|...+ +.+-.+.+-|+.+... ..+..+++.++.+||.|+++||||.+.+...-
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~------~~~g~~~va~a~Gv~~------~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~ 75 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG------KASGRLVVAGATGVGQ------YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPAS 75 (281)
T ss_pred cccccCCCccCccccccCCC------CCCCcEEecccCCcch------hHhHHHHHHhhccCceEEEEecccccCCCccc
Confidence 66788899999999886554 2232344456555422 23566788999999999999999999876544
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE-EEEc--CccCCcccc-----
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC-AVSG--APVTSWDGY----- 473 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~-~v~~--~~~~~~~~~----- 473 (571)
.+...-.+.+....|+.++++++.+.- .......+|||+||++...+.. ++ +..+ ++.. ++...|...
T Consensus 76 ~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~ 151 (281)
T COG4757 76 LSGSQWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLG 151 (281)
T ss_pred cccCccchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccchhhhhccc
Confidence 443334455556789999999998742 3457889999999998876554 45 3333 2222 222222110
Q ss_pred ---------------cchhhhhhcCCCCCCh----hh---------hccCCc-----chhhccCCCcEEEEecCCCCCCC
Q 008274 474 ---------------DTFYTEKYMGLPSEDP----VG---------YEYSSV-----MHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 474 ---------------~~~~~~~~~g~~~~~~----~~---------~~~~s~-----~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
......+++|...+-+ .. |.-.+| ....+.+++|+..+...+|+.+|
T Consensus 152 ~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P 231 (281)
T COG4757 152 AVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAP 231 (281)
T ss_pred ceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCC
Confidence 0111222334332211 01 111122 12346678999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCeeEEEcCCC----CCCCCCCCcHHHHHHHHHHHH
Q 008274 521 FRHTARLINALVAARKPYEILIFPDE----RHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 521 ~~~~~~~~~~l~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~i~~fl 567 (571)
+.....+.....+ .+.+++.++.. ||.-...+..+...+++++||
T Consensus 232 ~As~d~f~~~y~n--Apl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 232 PASRDAFASFYRN--APLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHHhhhc--CcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 9999999887754 46677777765 786544454588888999887
No 123
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.35 E-value=5.6e-11 Score=121.70 Aligned_cols=211 Identities=14% Similarity=0.128 Sum_probs=126.7
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
..+.++. ..+..+.|.|...+ ...+-||++||......+.+- . ..+.++.+|+++||.|+++|+||.|.+..
T Consensus 165 g~VV~~~---~~~eLi~Y~P~t~~---~~~~PlLiVp~~i~k~yilDL-~-p~~Slv~~L~~qGf~V~~iDwrgpg~s~~ 236 (532)
T TIGR01838 165 GAVVFEN---ELFQLIQYEPTTET---VHKTPLLIVPPWINKYYILDL-R-PQNSLVRWLVEQGHTVFVISWRNPDASQA 236 (532)
T ss_pred CeEEEEC---CcEEEEEeCCCCCc---CCCCcEEEECcccccceeeec-c-cchHHHHHHHHCCcEEEEEECCCCCcccc
Confidence 3455544 23555566775421 123445668996444332211 1 11346889999999999999999876543
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHH----HHhcC-CCeeEEEEEcCccCCccccc
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAI----TLARF-PDVFQCAVSGAPVTSWDGYD 474 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~----~~~~~-~~~~~~~v~~~~~~~~~~~~ 474 (571)
.+. +.+...+++.++++++.+.. +..++.++|||+||.++.. +++.+ ++++++++..+...|+....
T Consensus 237 ~~~------~ddY~~~~i~~al~~v~~~~--g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G 308 (532)
T TIGR01838 237 DKT------FDDYIRDGVIAALEVVEAIT--GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPG 308 (532)
T ss_pred cCC------hhhhHHHHHHHHHHHHHHhc--CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcc
Confidence 211 11222355778888887643 5678999999999998632 34444 77888888776655532100
Q ss_pred ----------------------------------------ch---hhhhhc-CCCC--CCh-------------------
Q 008274 475 ----------------------------------------TF---YTEKYM-GLPS--EDP------------------- 489 (571)
Q Consensus 475 ----------------------------------------~~---~~~~~~-g~~~--~~~------------------- 489 (571)
.. +...|+ |... .+.
T Consensus 309 ~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~l 388 (532)
T TIGR01838 309 ELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYL 388 (532)
T ss_pred hhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHH
Confidence 00 001111 1110 000
Q ss_pred -hhhccC----------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 490 -VGYEYS----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 490 -~~~~~~----------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..|.++ .-...+.+|++|+|+++|++|.++|...+..+.+.+ + ..+..+++++||..
T Consensus 389 r~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i---~-~~~~~vL~~sGHi~ 456 (532)
T TIGR01838 389 RNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL---G-GPKTFVLGESGHIA 456 (532)
T ss_pred HHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC---C-CCEEEEECCCCCch
Confidence 011111 112346778899999999999999999888887665 3 45667899999974
No 124
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.34 E-value=2.7e-11 Score=110.58 Aligned_cols=179 Identities=15% Similarity=0.139 Sum_probs=119.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR 411 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~ 411 (571)
.+..++.|... ..|||||++||..- ...| |..+.+.+++.||+||.+|+....+.. ..
T Consensus 4 ~~l~v~~P~~~----g~yPVv~f~~G~~~----~~s~---Ys~ll~hvAShGyIVV~~d~~~~~~~~-----------~~ 61 (259)
T PF12740_consen 4 KPLLVYYPSSA----GTYPVVLFLHGFLL----INSW---YSQLLEHVASHGYIVVAPDLYSIGGPD-----------DT 61 (259)
T ss_pred CCeEEEecCCC----CCcCEEEEeCCcCC----CHHH---HHHHHHHHHhCceEEEEecccccCCCC-----------cc
Confidence 34567888764 68999999999542 2233 566789999999999999966433211 11
Q ss_pred CCchhHHHHHHHHHHc---C-----CCcCCcEEEEeechHHHHHHHHHhcC-----CCeeEEEEEcCccCCcccccchhh
Q 008274 412 IDAEDQLTGAEWLIKQ---G-----LAKVGHIGLYGWSYGGYLSAITLARF-----PDVFQCAVSGAPVTSWDGYDTFYT 478 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~---~-----~~d~~~i~l~G~S~GG~~a~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~ 478 (571)
.+.+++.+.++|+.+. . .+|-+|++|.|||.||-++..++..+ +.+|++++.+.|+-........
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~-- 139 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT-- 139 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC--
Confidence 2356677788887663 1 25889999999999999999999877 5589999999998632111000
Q ss_pred hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCC---------CCh-HHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 479 EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDEN---------VHF-RHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 479 ~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~---------v~~-~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
.| ..+ ... ...-+...|+|++-..-... .|. .+-.+|++++ ..+....+..+.||
T Consensus 140 -----~P----~v~-~~~--p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~---~~p~~~~v~~~~GH 204 (259)
T PF12740_consen 140 -----EP----PVL-TYT--PQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDEC---KPPSWHFVAKDYGH 204 (259)
T ss_pred -----CC----ccc-cCc--ccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhc---CCCEEEEEeCCCCc
Confidence 00 000 001 11223457999997776642 222 3556676665 56777788899999
Q ss_pred C
Q 008274 549 M 549 (571)
Q Consensus 549 ~ 549 (571)
.
T Consensus 205 ~ 205 (259)
T PF12740_consen 205 M 205 (259)
T ss_pred h
Confidence 6
No 125
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.33 E-value=1.7e-11 Score=121.37 Aligned_cols=189 Identities=17% Similarity=0.182 Sum_probs=101.9
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC------hhhh-HHH------Hh---ccCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR------GLKF-EAS------IK---HNCG 410 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~------~~~~-~~~------~~---~~~~ 410 (571)
.++|||||-||..+.+. .+..++..||++||+|+++++|..... ...- ... .. ....
T Consensus 98 ~~~PvvIFSHGlgg~R~-------~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-------SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLR 170 (379)
T ss_dssp S-EEEEEEE--TT--TT-------TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE--
T ss_pred CCCCEEEEeCCCCcchh-------hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccc
Confidence 57999999999877754 456678999999999999999954321 1100 000 00 0000
Q ss_pred C---------------CCchhHHHHHHHHHHc--------------------CCCcCCcEEEEeechHHHHHHHHHhcCC
Q 008274 411 R---------------IDAEDQLTGAEWLIKQ--------------------GLAKVGHIGLYGWSYGGYLSAITLARFP 455 (571)
Q Consensus 411 ~---------------~~~~D~~~~~~~l~~~--------------------~~~d~~~i~l~G~S~GG~~a~~~~~~~~ 455 (571)
. .-..|+..+++.|.+. ..+|.++|+++|||+||..++.++.+.
T Consensus 171 ~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d- 249 (379)
T PF03403_consen 171 DFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD- 249 (379)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-
Confidence 0 0144566677776531 235678999999999999999888864
Q ss_pred CeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 456 DVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 456 ~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
.+|+++|+..|..- |-.+ ....+++.|+|+|+.+. . ....+...+.+ +....
T Consensus 250 ~r~~~~I~LD~W~~---------------Pl~~----------~~~~~i~~P~L~InSe~-f-~~~~~~~~~~~-~~~~~ 301 (379)
T PF03403_consen 250 TRFKAGILLDPWMF---------------PLGD----------EIYSKIPQPLLFINSES-F-QWWENIFRMKK-VISNN 301 (379)
T ss_dssp TT--EEEEES---T---------------TS-G----------GGGGG--S-EEEEEETT-T---HHHHHHHHT-T--TT
T ss_pred cCcceEEEeCCccc---------------CCCc----------ccccCCCCCEEEEECcc-c-CChhhHHHHHH-HhccC
Confidence 78999999887531 1110 11245778999998874 2 23333333333 33445
Q ss_pred CCeeEEEcCCCCCCC------CCC----------------CcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDERHMP------RRH----------------RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~------~~~----------------~~~~~~~~~i~~fl~~~l 571 (571)
....++.+.+..|.- ..+ ...+...+.+++||++||
T Consensus 302 ~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L 359 (379)
T PF03403_consen 302 KESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHL 359 (379)
T ss_dssp S-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhc
Confidence 778899999999961 111 013445677889999874
No 126
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.31 E-value=6.1e-11 Score=112.78 Aligned_cols=189 Identities=16% Similarity=0.125 Sum_probs=129.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEE-Eecc--CccEEEEEEECCCCceEEEEEeecCCe
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQV-LNRS--QTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~-~~r~--~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
.||.+++.+|+.++++- .-+.+.++.++|||+.++|. .-+. .+..+||.++.++|+.++||-- .
T Consensus 60 dlWe~slk~g~~~ritS---------~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyf-G--- 126 (668)
T COG4946 60 DLWEYSLKDGKPLRITS---------GLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYF-G--- 126 (668)
T ss_pred HHHHhhhccCCeeEEec---------ccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEe-c---
Confidence 47899999999998854 45677889999999988883 2222 2466999999999999999753 1
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEec----CCccEEEEEeCCCceeeceeecCeE---------E-------------
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEK----TGFRHLYLHDINGTCLGPITEGDWM---------V------------- 210 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~----~g~~~l~~~~~~~~~~~~lT~~~~~---------~------------- 210 (571)
..|.-+. .|.+|+ +++.++- ..|..||.+..+|.+.++|.-|... +
T Consensus 127 ----r~fT~Va---G~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~ 199 (668)
T COG4946 127 ----RRFTRVA---GWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKG 199 (668)
T ss_pred ----cccceee---ccCCCCCEEEEeccCCCcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCccccc
Confidence 2232222 466666 5555543 3367888888877755554422100 0
Q ss_pred -----EEEEEEeec---------------------CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 211 -----EQIVGVNEA---------------------SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 211 -----~~~~~~s~d---------------------g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
..-.+.+.+ |..+||.++-++. -+||++++ +|. ..++-|+-..++-
T Consensus 200 YkGGtrGklWis~d~g~tFeK~vdl~~~vS~PmIV~~RvYFlsD~eG~--GnlYSvdl--dGk----DlrrHTnFtdYY~ 271 (668)
T COG4946 200 YKGGTRGKLWISSDGGKTFEKFVDLDGNVSSPMIVGERVYFLSDHEGV--GNLYSVDL--DGK----DLRRHTNFTDYYP 271 (668)
T ss_pred ccCCccceEEEEecCCcceeeeeecCCCcCCceEEcceEEEEecccCc--cceEEecc--CCc----hhhhcCCchhccc
Confidence 011112222 4589999998885 89999999 776 7778887666655
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
-..+.||+.++|+..+ .||+++..+ +.++.|.-
T Consensus 272 R~~nsDGkrIvFq~~G-----dIylydP~t-d~lekldI 304 (668)
T COG4946 272 RNANSDGKRIVFQNAG-----DIYLYDPET-DSLEKLDI 304 (668)
T ss_pred cccCCCCcEEEEecCC-----cEEEeCCCc-Ccceeeec
Confidence 5788999999997654 899998743 33455543
No 127
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.30 E-value=1.1e-11 Score=105.73 Aligned_cols=217 Identities=16% Similarity=0.198 Sum_probs=137.0
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC--CCCCCChh-------
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--RGTARRGL------- 399 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--rG~~~~~~------- 399 (571)
+..+..-+|.|+.. +..++.|+++++-|-... .+.|.. -..+.+.....|++|+.||- ||..-.|.
T Consensus 25 ~c~Mtf~vylPp~a-~~~k~~P~lf~LSGLTCT---~~Nfi~-Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG 99 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDA-PRGKRCPVLFYLSGLTCT---HENFIE-KSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFG 99 (283)
T ss_pred ccceEEEEecCCCc-ccCCcCceEEEecCCccc---chhhHh-hhhHHHhHhhcCeEEECCCCCCCccccCCCccccccc
Confidence 46688889999875 344779999999995443 223321 12234566689999999994 55321111
Q ss_pred ---hh-HHHHhccCCC--CCchhHHHHHHHHHHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 400 ---KF-EASIKHNCGR--IDAEDQLTGAEWLIKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 400 ---~~-~~~~~~~~~~--~~~~D~~~~~~~l~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
.| .++....|.. .+++-+...+-.++.. -.+|+.+++|.||||||+-|+..+++.|++++.+-+.+|+.+-.
T Consensus 100 ~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 100 QGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred CCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 11 0111111111 0122233333333332 34789999999999999999999999999999999999998743
Q ss_pred cccchhhhhhcCCCCCChhhhccCCcchhhccCC---CcEEEEecCCCCCCChH-HHHHHHHHHHHcC-CCeeEEEcCCC
Q 008274 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK---GKLLLVHGMIDENVHFR-HTARLINALVAAR-KPYEILIFPDE 546 (571)
Q Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~---~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~-~~~~~~~~~~~ 546 (571)
.. ++=...+.|...+++..|...++...+++++ ..+||-+|+.|....-+ ..+.+.++.+... .++.++.-++-
T Consensus 180 ~c-pWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gy 258 (283)
T KOG3101|consen 180 NC-PWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGY 258 (283)
T ss_pred cC-cchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCC
Confidence 21 1212223344445777787777777666664 46899999999887622 2334445444332 68888899999
Q ss_pred CCCCC
Q 008274 547 RHMPR 551 (571)
Q Consensus 547 ~H~~~ 551 (571)
.|+..
T Consensus 259 DHSYy 263 (283)
T KOG3101|consen 259 DHSYY 263 (283)
T ss_pred Cccee
Confidence 99853
No 128
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.29 E-value=9.5e-12 Score=105.83 Aligned_cols=206 Identities=13% Similarity=0.072 Sum_probs=134.9
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC
Q 008274 314 LQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 393 (571)
Q Consensus 314 ~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 393 (571)
......+.+.+-. .|. -...+|.|.. ..|+.|++|||.+....... .-..+..+..+||+|+.++|--
T Consensus 40 ~~i~r~e~l~Yg~-~g~-q~VDIwg~~~------~~klfIfIHGGYW~~g~rk~----clsiv~~a~~~gY~vasvgY~l 107 (270)
T KOG4627|consen 40 KQIIRVEHLRYGE-GGR-QLVDIWGSTN------QAKLFIFIHGGYWQEGDRKM----CLSIVGPAVRRGYRVASVGYNL 107 (270)
T ss_pred ccccchhccccCC-CCc-eEEEEecCCC------CccEEEEEecchhhcCchhc----ccchhhhhhhcCeEEEEeccCc
Confidence 3344555555544 232 3355667754 45899999999776542222 1223567778999999998853
Q ss_pred CCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc-CCCeeEEEEEcCccCCccc
Q 008274 394 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDG 472 (571)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~~v~~~~~~~~~~ 472 (571)
+.. +.. ... .+.++...++|+.+... +.+.+.+.|||.|+++++.++.+ +..++.+++..+|+.++.-
T Consensus 108 ~~q-~ht-L~q--------t~~~~~~gv~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~E 176 (270)
T KOG4627|consen 108 CPQ-VHT-LEQ--------TMTQFTHGVNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE 176 (270)
T ss_pred Ccc-ccc-HHH--------HHHHHHHHHHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH
Confidence 321 100 111 15678888999888632 45679999999999999999876 4667888888888876532
Q ss_pred ccchhhhhhcCCCCCChhhhccCCc-chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 473 YDTFYTEKYMGLPSEDPVGYEYSSV-MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 473 ~~~~~~~~~~g~~~~~~~~~~~~s~-~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
....-.-.-+|...++. ...|+ +.....++.|+|++.|+.|..--.+|...++..+++ ..+..|++.+|.
T Consensus 177 L~~te~g~dlgLt~~~a---e~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy 247 (270)
T KOG4627|consen 177 LSNTESGNDLGLTERNA---ESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHY 247 (270)
T ss_pred HhCCccccccCcccchh---hhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchh
Confidence 21110001112222221 22222 344667788999999999998889999999998855 577889999996
No 129
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.27 E-value=3.5e-11 Score=107.64 Aligned_cols=118 Identities=22% Similarity=0.188 Sum_probs=81.1
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~ 395 (571)
.+.+.+.++..++ ++..++-.|.. +.-|++++.|||+.+.. .|..++..+. ..-..|+++|.||+|
T Consensus 48 dekedv~i~~~~~-t~n~Y~t~~~~-----t~gpil~l~HG~G~S~L-------SfA~~a~el~s~~~~r~~a~DlRgHG 114 (343)
T KOG2564|consen 48 DEKEDVSIDGSDL-TFNVYLTLPSA-----TEGPILLLLHGGGSSAL-------SFAIFASELKSKIRCRCLALDLRGHG 114 (343)
T ss_pred ccccccccCCCcc-eEEEEEecCCC-----CCccEEEEeecCcccch-------hHHHHHHHHHhhcceeEEEeeccccC
Confidence 3456666666554 56677666653 45699999999887755 3444566665 456788999999999
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.+--+-...... +...+|+.+.++++-.. +..+|.++||||||.+|.+.+..
T Consensus 115 eTk~~~e~dlS~---eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 115 ETKVENEDDLSL---ETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred ccccCChhhcCH---HHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 764332222111 12367888777777644 34679999999999999888765
No 130
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.24 E-value=5.5e-12 Score=117.98 Aligned_cols=169 Identities=17% Similarity=0.127 Sum_probs=110.0
Q ss_pred cEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE
Q 008274 384 ILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS 463 (571)
Q Consensus 384 ~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~ 463 (571)
|.|+++|.||.|.+... ...........|+.+.++.+.+.-. .+++.++||||||.+++.+++++|++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREALG--IKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHHT--TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHhC--CCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 68999999999877631 1112233347888888888888632 34599999999999999999999999999999
Q ss_pred cCccC--C----cccccc------------------------hh------hhhh-c------------CCCCC-------
Q 008274 464 GAPVT--S----WDGYDT------------------------FY------TEKY-M------------GLPSE------- 487 (571)
Q Consensus 464 ~~~~~--~----~~~~~~------------------------~~------~~~~-~------------g~~~~------- 487 (571)
.+++. . +..... .+ ..+. . .....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNM 154 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhh
Confidence 88851 0 000000 00 0000 0 00000
Q ss_pred ---ChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 488 ---DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 488 ---~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
....+...++...+.++++|+|+++|++|..+|+.....+.+.+ .+.++++++++||.. ..++...+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~GH~~-~~~~~~~~~~~i 228 (230)
T PF00561_consen 155 FWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI----PNSQLVLIEGSGHFA-FLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS----TTEEEEEETTCCSTH-HHHSHHHHHHHH
T ss_pred ccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc----CCCEEEECCCCChHH-HhcCHHhhhhhh
Confidence 00011122333456678999999999999999999888865544 568999999999986 233444444433
No 131
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.23 E-value=6.9e-12 Score=106.34 Aligned_cols=202 Identities=14% Similarity=0.149 Sum_probs=123.8
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
.|+++.|.-++.. ..|.++. .+......+.++++|.||.|.+...-+..... ...+|...+++.+...
T Consensus 44 ~iLlipGalGs~~--tDf~pql---~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~----ff~~Da~~avdLM~aL--- 111 (277)
T KOG2984|consen 44 YILLIPGALGSYK--TDFPPQL---LSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQ----FFMKDAEYAVDLMEAL--- 111 (277)
T ss_pred eeEeccccccccc--ccCCHHH---HhcCCCCceEEEEECCCCCCCCCCCcccchHH----HHHHhHHHHHHHHHHh---
Confidence 5666778655532 3454332 22222345999999999988764322221111 1246777777776654
Q ss_pred cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-----c-----cchhhhhhcCCCCCC---hhh----h-
Q 008274 431 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-----Y-----DTFYTEKYMGLPSED---PVG----Y- 492 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~-----~-----~~~~~~~~~g~~~~~---~~~----~- 492 (571)
+..++.|+|||-||..|+..|+++++.+...|..++..-... + ...|.++. ..|.++ ++. +
T Consensus 112 k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~-R~P~e~~Yg~e~f~~~wa 190 (277)
T KOG2984|consen 112 KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARG-RQPYEDHYGPETFRTQWA 190 (277)
T ss_pred CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhh-cchHHHhcCHHHHHHHHH
Confidence 567899999999999999999999987766554333221000 0 01111111 111110 000 0
Q ss_pred ---------c---cCC-cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHH
Q 008274 493 ---------E---YSS-VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 559 (571)
Q Consensus 493 ---------~---~~s-~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 559 (571)
. ... .-.-+.++++|+||+||++|+.++-.+.--+... -.-.++.++|.++|.+ .....+++
T Consensus 191 ~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~----~~~a~~~~~peGkHn~-hLrya~eF 265 (277)
T KOG2984|consen 191 AWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVL----KSLAKVEIHPEGKHNF-HLRYAKEF 265 (277)
T ss_pred HHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhh----cccceEEEccCCCcce-eeechHHH
Confidence 0 000 1123678899999999999999987665443332 3456888999999998 34567788
Q ss_pred HHHHHHHHHHh
Q 008274 560 EERIWEFIERT 570 (571)
Q Consensus 560 ~~~i~~fl~~~ 570 (571)
...+++||++.
T Consensus 266 nklv~dFl~~~ 276 (277)
T KOG2984|consen 266 NKLVLDFLKST 276 (277)
T ss_pred HHHHHHHHhcc
Confidence 99999999864
No 132
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.23 E-value=1e-09 Score=109.20 Aligned_cols=231 Identities=17% Similarity=0.146 Sum_probs=132.2
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++|||++.+ .||+.++.+++.++++......
T Consensus 43 ~~~~~~~~sP~g~~~~~v~~~-------------------------------------nly~~~~~~~~~~~lT~dg~~~ 85 (353)
T PF00930_consen 43 PKLQDAKWSPDGKYIAFVRDN-------------------------------------NLYLRDLATGQETQLTTDGEPG 85 (353)
T ss_dssp TTBSEEEE-SSSTEEEEEETT-------------------------------------EEEEESSTTSEEEESES--TTT
T ss_pred cccccceeecCCCeeEEEecC-------------------------------------ceEEEECCCCCeEEecccccee
Confidence 346778999999999998632 5788888888888887642110
Q ss_pred C---CCC------CCceeEEEEEccCCeEEEEEEeccCc--------------------------------cEEEEEEEC
Q 008274 103 D---QNY------DEEYLARVNWMHGNILTAQVLNRSQT--------------------------------KLKVLKFDI 141 (571)
Q Consensus 103 ~---~~~------~~~~~~~~~wspDg~~i~~~~~r~~~--------------------------------~~~i~~~d~ 141 (571)
- ..+ .-.....+-|||||+.|++..-.... ...|+++|+
T Consensus 86 i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~ 165 (353)
T PF00930_consen 86 IYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDL 165 (353)
T ss_dssp EEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEES
T ss_pred EEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEEC
Confidence 0 000 00112346799999988886543322 224555555
Q ss_pred CCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEE-EEecC-CccEEEEEeCCCceeeceee---cCeE-EEEE
Q 008274 142 KTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIW-ASEKT-GFRHLYLHDINGTCLGPITE---GDWM-VEQI 213 (571)
Q Consensus 142 ~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~-~s~~~-g~~~l~~~~~~~~~~~~lT~---~~~~-~~~~ 213 (571)
++|+.+.+.-... +.+....+..+ .|.+++ +++ ..+|. ....|++++..++..+.+.. ..|. ....
T Consensus 166 ~~~~~~~~~~~~~--~~~~~~yl~~v----~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~ 239 (353)
T PF00930_consen 166 ASGKTTELDPPNS--LNPQDYYLTRV----GWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDP 239 (353)
T ss_dssp SSTCCCEE---HH--HHTSSEEEEEE----EEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSE
T ss_pred CCCcEEEeeeccc--cCCCccCcccc----eecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecc
Confidence 5555433221100 00000001111 343332 443 34553 35677888876665443322 2231 1122
Q ss_pred EEEe-ecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce--EEEEECCCCCEEEEEeeCCC-CCCEEEE
Q 008274 214 VGVN-EASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK--HVAVLDHNMRNFVDFHDSLD-SPPRILL 289 (571)
Q Consensus 214 ~~~s-~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~--~~~~~s~~g~~~v~~~s~~~-~p~~l~~ 289 (571)
..+. ++++.+++.+.++| ..|||.++. ++. .+++||.++.. ....++++++.+.|...... .-..||+
T Consensus 240 ~~~~~~~~~~~l~~s~~~G--~~hly~~~~--~~~----~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~ 311 (353)
T PF00930_consen 240 PHFLGPDGNEFLWISERDG--YRHLYLYDL--DGG----KPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYR 311 (353)
T ss_dssp EEE-TTTSSEEEEEEETTS--SEEEEEEET--TSS----EEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEE
T ss_pred cccccCCCCEEEEEEEcCC--CcEEEEEcc--ccc----ceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEE
Confidence 2344 78888888888777 499999998 554 57799987643 24578899999988876532 3368889
Q ss_pred EEcCCCceeEeccCC
Q 008274 290 CSLQDGSLVLPLYEQ 304 (571)
Q Consensus 290 ~~~~~~~~~~~l~~~ 304 (571)
+++.++..++.|+..
T Consensus 312 v~~~~~~~~~~LT~~ 326 (353)
T PF00930_consen 312 VSLDSGGEPKCLTCE 326 (353)
T ss_dssp EETTETTEEEESSTT
T ss_pred EEeCCCCCeEeccCC
Confidence 998635667888874
No 133
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.19 E-value=2.2e-10 Score=106.73 Aligned_cols=220 Identities=20% Similarity=0.177 Sum_probs=86.2
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC-CCCChhhhHHHHhccCCC
Q 008274 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG-TARRGLKFEASIKHNCGR 411 (571)
Q Consensus 333 ~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG-~~~~~~~~~~~~~~~~~~ 411 (571)
.++-+.+... .+.-+||||-|-...-. . .+....+++.|.+.||.|+.+.++- ..++|. ..+.+
T Consensus 21 ~afe~~~~~~----~~~~~llfIGGLtDGl~-t---vpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~---~SL~~---- 85 (303)
T PF08538_consen 21 VAFEFTSSSS----SAPNALLFIGGLTDGLL-T---VPYLPDLAEALEETGWSLFQVQLSSSYSGWGT---SSLDR---- 85 (303)
T ss_dssp EEEEEEEE-T----TSSSEEEEE--TT--TT-----STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----HHH----
T ss_pred eEEEecCCCC----CCCcEEEEECCCCCCCC-C---CchHHHHHHHhccCCeEEEEEEecCccCCcCc---chhhh----
Confidence 4555554331 13347888876322111 1 1234456777778899999999885 344442 22222
Q ss_pred CCchhHHHHHHHHHHcC--CCcCCcEEEEeechHHHHHHHHHhcCC-----CeeEEEEEcCccCCcccccchhh------
Q 008274 412 IDAEDQLTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFP-----DVFQCAVSGAPVTSWDGYDTFYT------ 478 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~------ 478 (571)
+++|+.++++||.... .-..++|+|+|||.|.+-++.++.... ..+.++|+.+|+.|-+.......
T Consensus 86 -D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~ 164 (303)
T PF08538_consen 86 -DVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYE 164 (303)
T ss_dssp -HHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HH
T ss_pred -HHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHH
Confidence 3789999999999873 135789999999999999999997642 56899999999998554322111
Q ss_pred h------hhc--CCCCC----------------Chhhhc-c----------------CCcchhhccCCCcEEEEecCCCC
Q 008274 479 E------KYM--GLPSE----------------DPVGYE-Y----------------SSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 479 ~------~~~--g~~~~----------------~~~~~~-~----------------~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
+ ... |...+ ...+|. - ........++++|+|++.+++|+
T Consensus 165 ~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DE 244 (303)
T PF08538_consen 165 ELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDE 244 (303)
T ss_dssp HHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT
T ss_pred HHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCc
Confidence 0 000 11110 001110 0 01112356678899999999999
Q ss_pred CCChH-HHHHHHHHHHHcCC----CeeEEEcCCCCCCCCCCCc---HHHHHHHHHHHHH
Q 008274 518 NVHFR-HTARLINALVAARK----PYEILIFPDERHMPRRHRD---RIYMEERIWEFIE 568 (571)
Q Consensus 518 ~v~~~-~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~---~~~~~~~i~~fl~ 568 (571)
.||.. .-+++.++++..-. ....-++||++|.+..... ++.+.+++.+||+
T Consensus 245 yvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 245 YVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------------------
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 99875 33556666655422 2234589999999865443 4578888888874
No 134
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.17 E-value=4.8e-08 Score=93.97 Aligned_cols=235 Identities=12% Similarity=0.154 Sum_probs=131.4
Q ss_pred eeeeeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 4 AFHVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 4 ~~~~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
.|.+++.+|....+++.+-...-+..+||+++.|.|++.. . .|+
T Consensus 62 ly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~--~----------------------------------~l~ 105 (386)
T PF14583_consen 62 LYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG--R----------------------------------SLR 105 (386)
T ss_dssp EEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT--T----------------------------------EEE
T ss_pred eEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC--C----------------------------------eEE
Confidence 4889999999999987654433467799999999996521 1 578
Q ss_pred EEECCCCceEEEeccCCCCCCCCCCceeEEEEEc--cCCeEEEEEEeccC------------------ccEEEEEEECCC
Q 008274 84 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM--HGNILTAQVLNRSQ------------------TKLKVLKFDIKT 143 (571)
Q Consensus 84 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws--pDg~~i~~~~~r~~------------------~~~~i~~~d~~~ 143 (571)
.+||++.+.+.+-.- .+.+....+|+ .|++.++.+..... ....|+.+|++|
T Consensus 106 ~vdL~T~e~~~vy~~--------p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~t 177 (386)
T PF14583_consen 106 RVDLDTLEERVVYEV--------PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKT 177 (386)
T ss_dssp EEETTT--EEEEEE----------TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT
T ss_pred EEECCcCcEEEEEEC--------CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCC
Confidence 899999888766431 24444446775 46777765532221 156899999999
Q ss_pred CceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC--Cc-cEEEEEeCCCceeeceeec-CeEEEEEEEEeec
Q 008274 144 GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT--GF-RHLYLHDINGTCLGPITEG-DWMVEQIVGVNEA 219 (571)
Q Consensus 144 g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~--g~-~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~d 219 (571)
|+.+.|..+ ..|++. ..|+|. ++..+.|.-+.. .. ..||.++.+++..+.+... ..+...-..|++|
T Consensus 178 G~~~~v~~~--~~wlgH-~~fsP~------dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~D 248 (386)
T PF14583_consen 178 GERKVVFED--TDWLGH-VQFSPT------DPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPD 248 (386)
T ss_dssp --EEEEEEE--SS-EEE-EEEETT------EEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TT
T ss_pred CceeEEEec--CccccC-cccCCC------CCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCC
Confidence 999988764 467763 556663 344466655442 22 4899999999887766442 2233222359999
Q ss_pred CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCC------------CCCCEE
Q 008274 220 SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSL------------DSPPRI 287 (571)
Q Consensus 220 g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~------------~~p~~l 287 (571)
|+.|+|.+...+...+.|+.+++ ... +.+++...+.......|+||+.+|==.+.. ..-|-|
T Consensus 249 G~~i~y~~~~~~~~~~~i~~~d~--~t~----~~~~~~~~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i 322 (386)
T PF14583_consen 249 GSTIWYDSYTPGGQDFWIAGYDP--DTG----ERRRLMEMPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWI 322 (386)
T ss_dssp SS-EEEEEEETTT--EEEEEE-T--TT------EEEEEEE-SEEEEEE-TTSSEEEEEE-------------------EE
T ss_pred CCEEEEEeecCCCCceEEEeeCC--CCC----CceEEEeCCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEE
Confidence 99999988755555788999998 332 344554444455567789998876433221 111477
Q ss_pred EEEEcCCCce
Q 008274 288 LLCSLQDGSL 297 (571)
Q Consensus 288 ~~~~~~~~~~ 297 (571)
|++++..+..
T Consensus 323 ~~~~~~~~~~ 332 (386)
T PF14583_consen 323 YLFDVEAGRF 332 (386)
T ss_dssp EEEETTTTEE
T ss_pred EEeccccCce
Confidence 7788765543
No 135
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.15 E-value=7.6e-10 Score=106.02 Aligned_cols=186 Identities=18% Similarity=0.254 Sum_probs=110.8
Q ss_pred hhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 375 ~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
....+.++||+|+++||.|-|. .|..... ....+-|.+.+.+.+... +.-...+++++|+|.||+.+++++..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~---~y~~~~~---~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGT---PYLNGRS---EAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCC---cccCcHh---HHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 3566779999999999998765 2211110 001133444444444332 22235799999999999999887743
Q ss_pred ----CCCe---eEEEEEcCccCCcccc--------------------cchhh------hhh----------------c--
Q 008274 454 ----FPDV---FQCAVSGAPVTSWDGY--------------------DTFYT------EKY----------------M-- 482 (571)
Q Consensus 454 ----~~~~---~~~~v~~~~~~~~~~~--------------------~~~~~------~~~----------------~-- 482 (571)
.|++ +.++++.+|+.+.... ...|. ..+ .
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 3555 6778888877663210 00000 000 0
Q ss_pred ---CCCCCC-----hhhhccC-C-----cc------hhh---cc--CCCcEEEEecCCCCCCChHHHHHHHHHHHHcC-C
Q 008274 483 ---GLPSED-----PVGYEYS-S-----VM------HHV---HK--MKGKLLLVHGMIDENVHFRHTARLINALVAAR-K 536 (571)
Q Consensus 483 ---g~~~~~-----~~~~~~~-s-----~~------~~~---~~--~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~ 536 (571)
...... ...+... + .+ ..+ .+ -+.|++|.||..|++||+....+++++++++| .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 000000 0000000 0 00 001 11 14699999999999999999999999999999 8
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++++.++..+|..... ......++||...
T Consensus 252 ~V~~~~~~~~~H~~~~~----~~~~~a~~Wl~~r 281 (290)
T PF03583_consen 252 DVEYVRYPGGGHLGAAF----ASAPDALAWLDDR 281 (290)
T ss_pred CEEEEecCCCChhhhhh----cCcHHHHHHHHHH
Confidence 99999999999974221 1224566777654
No 136
>COG0627 Predicted esterase [General function prediction only]
Probab=99.15 E-value=5.7e-10 Score=106.53 Aligned_cols=214 Identities=19% Similarity=0.099 Sum_probs=135.0
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC--------------CCC--CChhhhHHHHhccCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR--------------GTA--RRGLKFEASIKHNCG 410 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r--------------G~~--~~~~~~~~~~~~~~~ 410 (571)
++.||+++.||-..... .+. ......+...+.|++++++|-. |.+ -|.. +.... ...+
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~-~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d-~~~~~-~~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVY-LLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSD-WTQPP-WASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceE-eccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecc-cccCc-cccC
Confidence 68899999999544321 111 1222345566789999987432 211 1111 11000 0001
Q ss_pred CCCchhHH-HHHH-HHHHcCCCcC--CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc---------cc--cc
Q 008274 411 RIDAEDQL-TGAE-WLIKQGLAKV--GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---------GY--DT 475 (571)
Q Consensus 411 ~~~~~D~~-~~~~-~l~~~~~~d~--~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---------~~--~~ 475 (571)
.....+++ .-+- .+.+....+. ++.+|+||||||+-|+.+|+++|++|+.+.+.+|+.+.. .. ..
T Consensus 126 ~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~ 205 (316)
T COG0627 126 PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGG 205 (316)
T ss_pred ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccC
Confidence 12233332 2233 3333333455 389999999999999999999999999999999998754 11 12
Q ss_pred hhhhhhcCCCCCChhhhccCCcchhhcc--------------CCCcEEEEecCCCCCCC--hHHHHHHHHHHHHcCCCee
Q 008274 476 FYTEKYMGLPSEDPVGYEYSSVMHHVHK--------------MKGKLLLVHGMIDENVH--FRHTARLINALVAARKPYE 539 (571)
Q Consensus 476 ~~~~~~~g~~~~~~~~~~~~s~~~~~~~--------------~~~p~lli~G~~D~~v~--~~~~~~~~~~l~~~~~~~~ 539 (571)
...+.++|.... ..+..++|...+++ ...++++.+|..|.... ......+.+++.+.|.+..
T Consensus 206 ~~~~~~~G~~~~--~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~ 283 (316)
T COG0627 206 KAFNAMLGPDSD--PAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNG 283 (316)
T ss_pred ccHHHhcCCCcc--ccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCce
Confidence 223334444322 35566677666654 34678888999998764 3347889999999999999
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+...++..|.+. ......+..+.|+.+.|
T Consensus 284 ~~~~~~G~Hsw~---~w~~~l~~~~~~~a~~l 312 (316)
T COG0627 284 VRDQPGGDHSWY---FWASQLADHLPWLAGAL 312 (316)
T ss_pred eeeCCCCCcCHH---HHHHHHHHHHHHHHHHh
Confidence 999999999863 35556677788876643
No 137
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.15 E-value=1.3e-09 Score=123.05 Aligned_cols=231 Identities=13% Similarity=0.070 Sum_probs=132.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCC-CCCCceEEEEEcCCCCceeeccccccc-chhhhHHHHhCCcEEEEECCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRY-GPPPYKTLISVYGGPCVQLVCDSWINT-VDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~-~~~~~P~vv~~hGg~~~~~~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
.+..+.+.. ..+..+.|.|...+. .++..|.||++||.+.... .|... -+.+...|.++||.|+++|+. .
T Consensus 38 tp~~vv~~~---~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~---~~d~~~~~s~v~~L~~~g~~v~~~d~G-~- 109 (994)
T PRK07868 38 SPFQIVESV---PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD---MWDVTRDDGAVGILHRAGLDPWVIDFG-S- 109 (994)
T ss_pred CCCcEEEEc---CcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc---ceecCCcccHHHHHHHCCCEEEEEcCC-C-
Confidence 344455544 235556667754211 0123367788999776654 23221 111368899999999999963 2
Q ss_pred CChhhhHHHHhccCCCCCchh----HHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCc
Q 008274 396 RRGLKFEASIKHNCGRIDAED----QLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSW 470 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D----~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~ 470 (571)
++... . .. ...+.| +.++++.+... ..+++.++||||||.+++.+++.+ +++++.++..+...|+
T Consensus 110 -~~~~~---~--~~-~~~l~~~i~~l~~~l~~v~~~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 110 -PDKVE---G--GM-ERNLADHVVALSEAIDTVKDV---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred -CChhH---c--Cc-cCCHHHHHHHHHHHHHHHHHh---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 22110 0 00 111222 23333333332 235799999999999998887644 5678887764433221
Q ss_pred cc------------c---------------cch-----h--------hhhh------cCCCCC--C---------hh---
Q 008274 471 DG------------Y---------------DTF-----Y--------TEKY------MGLPSE--D---------PV--- 490 (571)
Q Consensus 471 ~~------------~---------------~~~-----~--------~~~~------~g~~~~--~---------~~--- 490 (571)
.. . ..+ + ...+ +..+.. + .+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~ 259 (994)
T PRK07868 180 LAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI 259 (994)
T ss_pred CCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc
Confidence 10 0 000 0 0000 000000 0 00
Q ss_pred ------------hhcc-CCcc----------hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE-EEcCCC
Q 008274 491 ------------GYEY-SSVM----------HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI-LIFPDE 546 (571)
Q Consensus 491 ------------~~~~-~s~~----------~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 546 (571)
.+.. +... ..+.++++|+|+++|++|.++++..+..+.+.+ ...++ .+++++
T Consensus 260 ~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i----~~a~~~~~~~~~ 335 (994)
T PRK07868 260 AWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA----PNAEVYESLIRA 335 (994)
T ss_pred ccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC----CCCeEEEEeCCC
Confidence 0000 0111 136778899999999999999999998887765 23455 577899
Q ss_pred CCCC--CCCCcHHHHHHHHHHHHHHh
Q 008274 547 RHMP--RRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 547 ~H~~--~~~~~~~~~~~~i~~fl~~~ 570 (571)
||.. ......+.++..+.+||.++
T Consensus 336 GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 336 GHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred CCEeeeechhhhhhhChHHHHHHHHh
Confidence 9973 45667888999999999874
No 138
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.12 E-value=1.6e-09 Score=95.71 Aligned_cols=177 Identities=19% Similarity=0.156 Sum_probs=100.8
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHHhCC--cEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKG--ILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|+++||-..+.. + .......+++++.+ ..+.+++++.. .++..+.+..++++.
T Consensus 2 ilYlHGF~Ssp~---S--~Ka~~l~~~~~~~~~~~~~~~p~l~~~-------------------p~~a~~~l~~~i~~~- 56 (187)
T PF05728_consen 2 ILYLHGFNSSPQ---S--FKAQALKQYFAEHGPDIQYPCPDLPPF-------------------PEEAIAQLEQLIEEL- 56 (187)
T ss_pred eEEecCCCCCCC---C--HHHHHHHHHHHHhCCCceEECCCCCcC-------------------HHHHHHHHHHHHHhC-
Confidence 789999544432 1 12233456677665 45677776522 233444445555542
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc-ccccchhhhhh---cCCCCC-ChhhhccCCcchhh-cc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW-DGYDTFYTEKY---MGLPSE-DPVGYEYSSVMHHV-HK 503 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~---~g~~~~-~~~~~~~~s~~~~~-~~ 503 (571)
....+.|+|.|+||+.|.+++.+++ .++ |+++|.... ........+.. .+.... ....+.+...+... ..
T Consensus 57 -~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~ 132 (187)
T PF05728_consen 57 -KPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPT 132 (187)
T ss_pred -CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccC
Confidence 3344999999999999999998774 234 777776652 11111111100 000000 01111111111111 11
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
-..++++++++.|++++++.+...++ .+..++.++++|.+. +..+..+.|++|+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~-------~~~~~i~~ggdH~f~---~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYR-------GCAQIIEEGGDHSFQ---DFEEYLPQIIAFL 186 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhc-------CceEEEEeCCCCCCc---cHHHHHHHHHHhh
Confidence 23589999999999999876544443 234456788899984 4677788899887
No 139
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.12 E-value=4.7e-10 Score=106.30 Aligned_cols=121 Identities=17% Similarity=0.057 Sum_probs=85.4
Q ss_pred CcEEEEEEEcCCCCCC--CCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 329 GTVLYGALYKPDESRY--GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~--~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
+.++...++.|..... ...++|+|++-||.+... ..+...++.+++.||+|..++++|+...+..-.....
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~-------~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~ 121 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYV-------TGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGP 121 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCc-------cchhhhHHHHhhCceEEEeccCCCcccccCChhhcCC
Confidence 5678888888876421 113789999999965542 2456679999999999999999996433222111121
Q ss_pred cc----CCCCCchhHHHHHHHHHHc---C----CCcCCcEEEEeechHHHHHHHHHhcCCC
Q 008274 407 HN----CGRIDAEDQLTGAEWLIKQ---G----LAKVGHIGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 407 ~~----~~~~~~~D~~~~~~~l~~~---~----~~d~~~i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
.. ..-....|+...+++|++. + .+|..+|+++|||+||+.++.++..+.+
T Consensus 122 ~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 122 GSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 00 1112367888888888876 4 4788999999999999999988876543
No 140
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.11 E-value=5.9e-09 Score=85.30 Aligned_cols=185 Identities=19% Similarity=0.203 Sum_probs=112.6
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCc-hhHHHHHHHHHHcC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDA-EDQLTGAEWLIKQG 428 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~l~~~~ 428 (571)
-+||+.||.+.++. +..+...+..|+.+|+.|+.++++-.-.+... ... ...+.... ...+.++..|...
T Consensus 15 ~tilLaHGAGasmd-----St~m~~~a~~la~~G~~vaRfefpYma~Rrtg-~rk--Pp~~~~t~~~~~~~~~aql~~~- 85 (213)
T COG3571 15 VTILLAHGAGASMD-----STSMTAVAAALARRGWLVARFEFPYMAARRTG-RRK--PPPGSGTLNPEYIVAIAQLRAG- 85 (213)
T ss_pred EEEEEecCCCCCCC-----CHHHHHHHHHHHhCceeEEEeecchhhhcccc-CCC--CcCccccCCHHHHHHHHHHHhc-
Confidence 46778899766654 23455568889999999999997632111000 000 01111112 2234444445443
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-cCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCc
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS-GAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK 507 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p 507 (571)
.+..++++-|+||||-++.+.+..----+.+.++ ..|++. .|.|+.- -..++..+++|
T Consensus 86 -l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp------------pGKPe~~--------Rt~HL~gl~tP 144 (213)
T COG3571 86 -LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP------------PGKPEQL--------RTEHLTGLKTP 144 (213)
T ss_pred -ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC------------CCCcccc--------hhhhccCCCCC
Confidence 3667899999999999999888642222455554 334432 1333221 13578889999
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC---------CCcHHHHHHHHHHHHHH
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR---------HRDRIYMEERIWEFIER 569 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---------~~~~~~~~~~i~~fl~~ 569 (571)
+||.||+.|+.-..++...+ +| ..+.+++.+.++.|.+.. ....+...+.+..|...
T Consensus 145 tli~qGtrD~fGtr~~Va~y--~l---s~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 145 TLITQGTRDEFGTRDEVAGY--AL---SDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred eEEeecccccccCHHHHHhh--hc---CCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999999998776654222 12 468899999999998622 12344556677777654
No 141
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.10 E-value=2.2e-09 Score=98.67 Aligned_cols=206 Identities=17% Similarity=0.112 Sum_probs=118.4
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC----cEEEEECCCCCC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG----ILVWKLDNRGTA 395 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~rG~~ 395 (571)
+.+.+...-..+....+|.|+++ ....++||++++||-...+. .........|...| -++|.+|+-...
T Consensus 70 ~~~~~~~~l~~~~~~vv~lppgy-~~~~k~pvl~~~DG~~~~~~------g~i~~~~dsli~~g~i~pai~vgid~~d~~ 142 (299)
T COG2382 70 EEILYSSELLSERRRVVYLPPGY-NPLEKYPVLYLQDGQDWFRS------GRIPRILDSLIAAGEIPPAILVGIDYIDVK 142 (299)
T ss_pred hhhhhhhhhccceeEEEEeCCCC-CccccccEEEEeccHHHHhc------CChHHHHHHHHHcCCCCCceEEecCCCCHH
Confidence 33333333334566677888776 34479999999999433222 11122234455443 678888875322
Q ss_pred CChhhhHHHHhccCCCCCchhH-HHHHHHHHHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQ-LTGAEWLIKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG 472 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~-~~~~~~l~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~ 472 (571)
.+...+. .... ....+ .+.+-++.+. -.-+.++-+|+|.|+||.++++++.++|++|.++++.+|...|.-
T Consensus 143 ~R~~~~~-----~n~~-~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~ 216 (299)
T COG2382 143 KRREELH-----CNEA-YWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTP 216 (299)
T ss_pred HHHHHhc-----ccHH-HHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCc
Confidence 2222111 1100 01112 2233344333 123567889999999999999999999999999999999877643
Q ss_pred ccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 473 YDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 473 ~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
.... +.. +.....+-.........-++...++.+.+.+ ...++++.|+..+.+..+..|+| ||...
T Consensus 217 ~~~~--------~~~--~~~~~l~~~~a~~~~~~~~l~~g~~~~~~~~--pNr~L~~~L~~~g~~~~yre~~G-gHdw~ 282 (299)
T COG2382 217 LDTQ--------PQG--EVAESLKILHAIGTDERIVLTTGGEEGDFLR--PNRALAAQLEKKGIPYYYREYPG-GHDWA 282 (299)
T ss_pred cccc--------ccc--chhhhhhhhhccCccceEEeecCCccccccc--hhHHHHHHHHhcCCcceeeecCC-CCchh
Confidence 2211 000 0000011111122222333444444444444 56778899999999999999999 99763
No 142
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.09 E-value=4.4e-09 Score=92.65 Aligned_cols=207 Identities=18% Similarity=0.253 Sum_probs=114.7
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCCh-
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARRG- 398 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~~- 398 (571)
...+...+|..+..|.-.|... .+++.|.||+..|....+ . .+..++.+|+.+||.|+.+|.--+ |.+.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~--~~~~~~tiliA~Gf~rrm---d----h~agLA~YL~~NGFhViRyDsl~HvGlSsG 74 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN--EPKRNNTILIAPGFARRM---D----HFAGLAEYLSANGFHVIRYDSLNHVGLSSG 74 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT--S---S-EEEEE-TT-GGG---G----GGHHHHHHHHTTT--EEEE---B-------
T ss_pred cceeEcCCCCEEEEeccCCCCC--CcccCCeEEEecchhHHH---H----HHHHHHHHHhhCCeEEEeccccccccCCCC
Confidence 4566778999999999999864 346778999888854432 2 345578999999999999997643 2222
Q ss_pred --hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-cc
Q 008274 399 --LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-DT 475 (571)
Q Consensus 399 --~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~~ 475 (571)
.+|.... ...|+...++||...+ ..+++++..|.-|-+|...+++ ++ ..-+|..-|+.++... ..
T Consensus 75 ~I~eftms~-------g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~ 142 (294)
T PF02273_consen 75 DINEFTMSI-------GKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEK 142 (294)
T ss_dssp ------HHH-------HHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHH
T ss_pred ChhhcchHH-------hHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHH
Confidence 2222111 1467889999999764 4679999999999999999995 44 3455555588886532 11
Q ss_pred hhhhhhcCCC-----CC--------Chhhhc----------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 476 FYTEKYMGLP-----SE--------DPVGYE----------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 476 ~~~~~~~g~~-----~~--------~~~~~~----------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
.+...|++.| .. ..+.|. -.|-...++++.+|++.+++.+|..|......++...+.
T Consensus 143 al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~ 222 (294)
T PF02273_consen 143 ALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNIN 222 (294)
T ss_dssp HHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-T
T ss_pred HhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcC
Confidence 2222233222 11 001110 013344577888999999999999999888888776552
Q ss_pred HcCCCeeEEEcCCCCCCC
Q 008274 533 AARKPYEILIFPDERHMP 550 (571)
Q Consensus 533 ~~~~~~~~~~~~~~~H~~ 550 (571)
...+++..++|+.|.+
T Consensus 223 --s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 223 --SNKCKLYSLPGSSHDL 238 (294)
T ss_dssp --T--EEEEEETT-SS-T
T ss_pred --CCceeEEEecCccchh
Confidence 2578899999999987
No 143
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.08 E-value=2.9e-09 Score=99.28 Aligned_cols=205 Identities=18% Similarity=0.145 Sum_probs=126.4
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
.+.|.++++||--++.. .|..+...|+ ..|-.|+.+|.|-+|.+... ..+ ......+|+...++...
T Consensus 50 ~~~Pp~i~lHGl~GS~~-------Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~---~~h--~~~~ma~dv~~Fi~~v~ 117 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE-------NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI---TVH--NYEAMAEDVKLFIDGVG 117 (315)
T ss_pred CCCCceEEecccccCCC-------CHHHHHHHhcccccCceEEEecccCCCCccc---ccc--CHHHHHHHHHHHHHHcc
Confidence 45688888999666532 3444566666 57889999999988866421 111 11122455555555554
Q ss_pred HcCCCcCCcEEEEeechHH-HHHHHHHhcCCCeeEEEEE--cCcc-CCccc------------c--c----c--------
Q 008274 426 KQGLAKVGHIGLYGWSYGG-YLSAITLARFPDVFQCAVS--GAPV-TSWDG------------Y--D----T-------- 475 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG-~~a~~~~~~~~~~~~~~v~--~~~~-~~~~~------------~--~----~-------- 475 (571)
... -..++.++|||||| .+++..++..|+....++. .+|. ..... . . .
T Consensus 118 ~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~ 195 (315)
T KOG2382|consen 118 GST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKS 195 (315)
T ss_pred ccc--ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHH
Confidence 321 24579999999999 7777777888888766555 3441 11000 0 0 0
Q ss_pred ------------hhhhhhcCCCCCCh-----------hhhc---cCCcchhh--ccCCCcEEEEecCCCCCCChHHHHHH
Q 008274 476 ------------FYTEKYMGLPSEDP-----------VGYE---YSSVMHHV--HKMKGKLLLVHGMIDENVHFRHTARL 527 (571)
Q Consensus 476 ------------~~~~~~~g~~~~~~-----------~~~~---~~s~~~~~--~~~~~p~lli~G~~D~~v~~~~~~~~ 527 (571)
+....+.+.+.+.. +.+. ..+....+ .....|+|+++|.++..++.++-..+
T Consensus 196 l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~ 275 (315)
T KOG2382|consen 196 LIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRM 275 (315)
T ss_pred HHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHH
Confidence 00000000111100 0111 11111122 33457999999999999998877777
Q ss_pred HHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 528 INALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+ ..++++.++++||+. ..++.+.+.+.|.+|+..+
T Consensus 276 ~~~f----p~~e~~~ld~aGHwV-h~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 276 EKIF----PNVEVHELDEAGHWV-HLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHhc----cchheeecccCCcee-ecCCHHHHHHHHHHHhccc
Confidence 6655 458999999999998 5688999999999998765
No 144
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.08 E-value=3.9e-09 Score=103.61 Aligned_cols=248 Identities=16% Similarity=0.163 Sum_probs=160.5
Q ss_pred hccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cchhhhHHHHhCCcEEEE
Q 008274 311 IKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDMRAQYLRSKGILVWK 388 (571)
Q Consensus 311 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~~~~~l~~~G~~v~~ 388 (571)
+...+. ..|...+.+.||..+... -.|... ++.|+|++.||--.+.. .|.. .-...+-.|+++||.|..
T Consensus 41 i~~~gy-~~E~h~V~T~DgYiL~lh-RIp~~~----~~rp~Vll~HGLl~sS~---~Wv~n~p~~sLaf~LadaGYDVWL 111 (403)
T KOG2624|consen 41 IEKYGY-PVEEHEVTTEDGYILTLH-RIPRGK----KKRPVVLLQHGLLASSS---SWVLNGPEQSLAFLLADAGYDVWL 111 (403)
T ss_pred HHHcCC-ceEEEEEEccCCeEEEEe-eecCCC----CCCCcEEEeeccccccc---cceecCccccHHHHHHHcCCceee
Confidence 333444 678999999999855444 344442 57899999999554433 3421 123356778899999999
Q ss_pred ECCCCCCCChhhhHHHH--hc-----cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC---ee
Q 008274 389 LDNRGTARRGLKFEASI--KH-----NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VF 458 (571)
Q Consensus 389 ~d~rG~~~~~~~~~~~~--~~-----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~ 458 (571)
-|.||...+.+...-.. .. .+.+...-|+-+.++++.+.. ..+++..+|||.|+.....+++..|+ ++
T Consensus 112 gN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI 189 (403)
T KOG2624|consen 112 GNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKI 189 (403)
T ss_pred ecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhh
Confidence 99999544322111000 00 112224568999999998864 46799999999999999999888765 57
Q ss_pred EEEEEcCccCCcc---cc-------------------------c-ch----hhh------------------hhcC----
Q 008274 459 QCAVSGAPVTSWD---GY-------------------------D-TF----YTE------------------KYMG---- 483 (571)
Q Consensus 459 ~~~v~~~~~~~~~---~~-------------------------~-~~----~~~------------------~~~g---- 483 (571)
+..++.+|+.-.. .+ . .. +.. ...|
T Consensus 190 ~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~ 269 (403)
T KOG2624|consen 190 KSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSN 269 (403)
T ss_pred heeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchH
Confidence 8888888876221 00 0 00 000 0000
Q ss_pred -------------CCC---------------------------CChhhhcc-CCcchhhccCCCcEEEEecCCCCCCChH
Q 008274 484 -------------LPS---------------------------EDPVGYEY-SSVMHHVHKMKGKLLLVHGMIDENVHFR 522 (571)
Q Consensus 484 -------------~~~---------------------------~~~~~~~~-~s~~~~~~~~~~p~lli~G~~D~~v~~~ 522 (571)
.|. .+...|.. ..|...+.+++.|+.+++|.+|..+.++
T Consensus 270 ~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~ 349 (403)
T KOG2624|consen 270 NWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPE 349 (403)
T ss_pred hhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHH
Confidence 000 12222222 2455567888999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 523 HTARLINALVAARKPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
....+...+..... ....-+++-+|. +.....++.+++.+++.+++.
T Consensus 350 DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 350 DVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred HHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 99888777655433 233337888895 234567888999999988753
No 145
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.08 E-value=1.9e-08 Score=91.41 Aligned_cols=223 Identities=15% Similarity=0.096 Sum_probs=118.7
Q ss_pred CCCCeEEEEEcCC-CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcE-EEEECCCC
Q 008274 316 LEPPDIVQIQAND-GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL-VWKLDNRG 393 (571)
Q Consensus 316 ~~~~~~~~~~~~d-g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~rG 393 (571)
..+.+...+.+.+ |.....++..|.+... +.+||||.++-|..-.-. -.+.....+++.-.. .+.+.|+.
T Consensus 6 ~~~~~~~~l~s~~~~~~yri~i~~P~~~~~-~~~YpVlY~lDGn~vf~~-------~~~~~~~~~~~~~~~~iv~iGye~ 77 (264)
T COG2819 6 YPHFRERDLKSANTGRKYRIFIATPKNYPK-PGGYPVLYMLDGNAVFNA-------LTEIMLRILADLPPPVIVGIGYET 77 (264)
T ss_pred cccceeEeeeecCCCcEEEEEecCCCCCCC-CCCCcEEEEecchhhhch-------HHHHhhhhhhcCCCceEEEecccc
Confidence 3455566666654 5778899999988743 345999888777422211 111112223332211 22222221
Q ss_pred ---------CCCChh----hhHHHH----hccCCC--CCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 394 ---------TARRGL----KFEASI----KHNCGR--IDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 394 ---------~~~~~~----~~~~~~----~~~~~~--~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
...+.. ...... ...-|. .-.+-+.+-++-+++. ..++.++.+|+|||+||.+++.++..
T Consensus 78 ~~~~~~~~r~~DyTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~ 157 (264)
T COG2819 78 ILVFDPNRRAYDYTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLT 157 (264)
T ss_pred ccccccccccccCCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhc
Confidence 111110 000000 011111 0123344455555554 55788999999999999999999999
Q ss_pred CCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEe--cCCCCCCC------hHHHH
Q 008274 454 FPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVH--GMIDENVH------FRHTA 525 (571)
Q Consensus 454 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~--G~~D~~v~------~~~~~ 525 (571)
+|+.|.+.++.+|-.-|.. .......+..... . ..++.|.- |+.|.... ..++.
T Consensus 158 ~p~~F~~y~~~SPSlWw~n----------------~~~l~~~~~~~~~-~-~~~i~l~iG~~e~~~~~~~~~~~~~~~~~ 219 (264)
T COG2819 158 YPDCFGRYGLISPSLWWHN----------------EAILREIESLKLL-K-TKRICLYIGSGELDSSRSIRMAENKQEAA 219 (264)
T ss_pred CcchhceeeeecchhhhCC----------------HHHhccccccccC-C-CcceEEEecccccCcchhhhhhhHHHHHH
Confidence 9999999999998654321 1111111111111 1 33444444 44443222 34445
Q ss_pred HHHHHHHH-cCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 526 RLINALVA-ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 526 ~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+....+++ .+..+.+..+|+.+|+- .....+...++|+.
T Consensus 220 ~~~~~~~~~~g~~~~f~~~~~~~H~~----~~~~~~~~al~~l~ 259 (264)
T COG2819 220 ELSSLLEKRTGARLVFQEEPLEHHGS----VIHASLPSALRFLD 259 (264)
T ss_pred HHHHHHhhccCCceEecccccccccc----hHHHHHHHHHHhhh
Confidence 55555666 77899999999888874 22333444555553
No 146
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.07 E-value=2.1e-09 Score=97.85 Aligned_cols=189 Identities=13% Similarity=0.146 Sum_probs=117.3
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH------hccC------CC---
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI------KHNC------GR--- 411 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~------~~~~------~~--- 411 (571)
.++|+|||-||-.+++++ |+.+.-.||++||+|+++.+|..+..-..+.... ...+ ..
T Consensus 116 ~k~PvvvFSHGLggsRt~-------YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTL-------YSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCccEEEEecccccchhh-------HHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 689999999998887663 4556789999999999999997654211111000 0000 00
Q ss_pred ----------CCchhHHHHHHHHHHc---------------------CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 412 ----------IDAEDQLTGAEWLIKQ---------------------GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 412 ----------~~~~D~~~~~~~l~~~---------------------~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
..++++..|++-+.+- +.+|..+++|+|||+||..++...+.+ ..|+|
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~Frc 267 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRC 267 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceee
Confidence 0134455555544331 124667899999999999999888854 57899
Q ss_pred EEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 461 AVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 461 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
+|+..+.. .|-+. .+..+++.|+|+|.-+ |.. -. ++....+++...+..-.+
T Consensus 268 aI~lD~WM---------------~Pl~~----------~~~~~arqP~~finv~-~fQ-~~-en~~vmKki~~~n~g~~~ 319 (399)
T KOG3847|consen 268 AIALDAWM---------------FPLDQ----------LQYSQARQPTLFINVE-DFQ-WN-ENLLVMKKIESQNEGNHV 319 (399)
T ss_pred eeeeeeee---------------cccch----------hhhhhccCCeEEEEcc-ccc-ch-hHHHHHHhhhCCCccceE
Confidence 99876431 01000 2345667899998833 222 22 334444555555566677
Q ss_pred EEcCCCCCCC-C---------------------CCCcHHHHHHHHHHHHHHhC
Q 008274 541 LIFPDERHMP-R---------------------RHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 541 ~~~~~~~H~~-~---------------------~~~~~~~~~~~i~~fl~~~l 571 (571)
+.+.|+=|.- . ..+......+..++||++|+
T Consensus 320 it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~ 372 (399)
T KOG3847|consen 320 ITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHL 372 (399)
T ss_pred EEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhh
Confidence 8888887741 0 01234556677888998874
No 147
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.07 E-value=7.5e-09 Score=94.19 Aligned_cols=130 Identities=18% Similarity=0.124 Sum_probs=87.7
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
..+.++..+|..++..-..-+.. +...+..+||-+||.|++-. .+.++...|.+.|+.++.+||||++....
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~-~~gs~~gTVv~~hGsPGSH~-------DFkYi~~~l~~~~iR~I~iN~PGf~~t~~ 78 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSL-PSGSPLGTVVAFHGSPGSHN-------DFKYIRPPLDEAGIRFIGINYPGFGFTPG 78 (297)
T ss_pred EEEEcccccCceEEEEEEEEecC-CCCCCceeEEEecCCCCCcc-------chhhhhhHHHHcCeEEEEeCCCCCCCCCC
Confidence 44566666665544443332221 11245679999999999854 35667889999999999999999876543
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
... ..+ .-.+-...++.|.++-.++ +++.++|||.|+-.|+.+++.+|- .++++.+|+
T Consensus 79 ~~~-~~~------~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~~--~g~~lin~~ 136 (297)
T PF06342_consen 79 YPD-QQY------TNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHPL--HGLVLINPP 136 (297)
T ss_pred Ccc-ccc------ChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCcc--ceEEEecCC
Confidence 211 111 1344566667777664455 789999999999999999999863 455655553
No 148
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.05 E-value=7.8e-09 Score=97.82 Aligned_cols=231 Identities=15% Similarity=0.045 Sum_probs=137.5
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhC-------CcEEEEECCCCCC-CChhhh
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-------GILVWKLDNRGTA-RRGLKF 401 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~-------G~~v~~~d~rG~~-~~~~~~ 401 (571)
..|.+..|.-.+. .+-.+|+++|+-.+++.........-.-+.+.+..- -|-||++|.-|++ ++...-
T Consensus 36 ~~vay~T~Gtln~----~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 36 ARVAYETYGTLNA----EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cEEEEEecccccc----cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 4454444443332 345799999997776654442211111123444444 4999999999875 332211
Q ss_pred H-HHHh----ccCCCCCchhHHHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC------
Q 008274 402 E-ASIK----HNCGRIDAEDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS------ 469 (571)
Q Consensus 402 ~-~~~~----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~------ 469 (571)
. ...- .......+.|++.+-+.|++.-.| +++ +|+|.||||+-++..+..+|+++..++.++...-
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~i 189 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNI 189 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHH
Confidence 1 1110 122334678888888888776444 344 4999999999999999999999888777665321
Q ss_pred ---------------cc---ccc----------------------chhhhhhcCCC----------CCChhhhc------
Q 008274 470 ---------------WD---GYD----------------------TFYTEKYMGLP----------SEDPVGYE------ 493 (571)
Q Consensus 470 ---------------~~---~~~----------------------~~~~~~~~g~~----------~~~~~~~~------ 493 (571)
|. ++. ..+.+++-... ....+.|.
T Consensus 190 a~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~k 269 (368)
T COG2021 190 AFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDK 269 (368)
T ss_pred HHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHH
Confidence 10 000 00111111100 00011110
Q ss_pred ------------------c-------CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 494 ------------------Y-------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 494 ------------------~-------~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
. .+....+++++.|+|++.-+.|...|+++..++.+.|...+. -..+-...||
T Consensus 270 f~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~--~~~i~S~~GH 347 (368)
T COG2021 270 FVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA--LREIDSPYGH 347 (368)
T ss_pred HHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc--eEEecCCCCc
Confidence 0 122233777899999999999999999999999999977765 2234455689
Q ss_pred CCCCCCcHHHHHHHHHHHHHH
Q 008274 549 MPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 549 ~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.-. ......+.+.|.+||+.
T Consensus 348 DaF-L~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 348 DAF-LVESEAVGPLIRKFLAL 367 (368)
T ss_pred hhh-hcchhhhhHHHHHHhhc
Confidence 642 23445566788888764
No 149
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.04 E-value=3.4e-10 Score=118.64 Aligned_cols=128 Identities=17% Similarity=0.217 Sum_probs=89.1
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CC-cEEEEECCC-CCCCChhhhHHHHhcc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KG-ILVWKLDNR-GTARRGLKFEASIKHN 408 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G-~~v~~~d~r-G~~~~~~~~~~~~~~~ 408 (571)
+...+|.|.... ..+++||||++|||+........+ ....++. .+ ++|++++|| |..++...... ..
T Consensus 79 l~l~i~~p~~~~-~~~~~pv~v~ihGG~~~~g~~~~~------~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~ 148 (493)
T cd00312 79 LYLNVYTPKNTK-PGNSLPVMVWIHGGGFMFGSGSLY------PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---EL 148 (493)
T ss_pred CeEEEEeCCCCC-CCCCCCEEEEEcCCccccCCCCCC------ChHHHHhcCCCEEEEEecccccccccccCCCC---CC
Confidence 677788887531 236789999999997754422111 1234443 44 999999999 65444321111 12
Q ss_pred CCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccCC
Q 008274 409 CGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~~ 469 (571)
.+...+.|+..+++|+.+. ...|+++|.|+|+|+||+++..++.. .+.+|+++|+.+|...
T Consensus 149 ~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 149 PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 2333478999999999875 34799999999999999999988875 2457999998877543
No 150
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=99.04 E-value=1.2e-07 Score=97.13 Aligned_cols=244 Identities=14% Similarity=0.105 Sum_probs=143.0
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEee--c-CCC-------------CCCCCCcccccCCCCCCCCc------eEEEEE
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMH--Q-GKS-------------SVGSEAQEDHAYPFAGASNV------KVRLGV 84 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~--~-~~~-------------~~~~~~~~~~~y~~~g~~~~------~~~l~~ 84 (571)
.+.+||||++|||.....+. +.+.+.. . ++. -.+..+...+-|........ ...++.
T Consensus 128 ~~~~Spdg~~la~~~s~~G~-e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~ 206 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGS-EWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYR 206 (414)
T ss_dssp EEEETTTSSEEEEEEEETTS-SEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEE
T ss_pred eeeECCCCCEEEEEecCCCC-ceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEE
Confidence 56789999999996554433 2222211 0 000 00122333344433333222 467888
Q ss_pred EECCCCceE-EEeccCCCCCCCCCCce-eEEEEEccCCeEEEEEEeccCccEEEEEEECCCC-----ceEEEEEeecCCe
Q 008274 85 VSAAGGPVS-WMDLQCGGTDQNYDEEY-LARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG-----QRKVILVEELDSW 157 (571)
Q Consensus 85 ~dl~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g-----~~~~l~~~~~~~w 157 (571)
+.+.++... .+-++ ...... ...+.+|+||++++..+.+....+.+|.+|...+ +.+.|........
T Consensus 207 ~~~gt~~~~d~lvfe------~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~ 280 (414)
T PF02897_consen 207 HKLGTPQSEDELVFE------EPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE 280 (414)
T ss_dssp EETTS-GGG-EEEEC-------TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred EECCCChHhCeeEEe------ecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence 998887654 22222 112223 5678999999987776666655589999999986 5667766443322
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCC-ccEEEEEeCCCce---ee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTG-FRHLYLHDINGTC---LG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g-~~~l~~~~~~~~~---~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
... ...++.+++.+++++ ...|+.++++... .+ .|......+ .+..++..+++|++....++
T Consensus 281 ~~v-----------~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~-~l~~~~~~~~~Lvl~~~~~~- 347 (414)
T PF02897_consen 281 YYV-----------DHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDV-SLEDVSLFKDYLVLSYRENG- 347 (414)
T ss_dssp EEE-----------EEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSE-EEEEEEEETTEEEEEEEETT-
T ss_pred EEE-----------EccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCce-eEEEEEEECCEEEEEEEECC-
Confidence 110 113556888887744 5789999987654 22 333332211 12235667889999988776
Q ss_pred ceeEEEEEEeCCC-CCCCCCCCeEecC-CCce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 233 LESHLYCAKLYPD-WNHTLEAPVKLTN-GKGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 233 ~~~~l~~~~l~~~-g~~~~~~~~~lt~-~~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
..+|..+++ . +. ....+.. ..|. ......++++.+.|.+++..+|+.+|.+++.+++.
T Consensus 348 -~~~l~v~~~--~~~~----~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 348 -SSRLRVYDL--DDGK----ESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp -EEEEEEEET--T-TE----EEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred -ccEEEEEEC--CCCc----EEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 488999998 4 33 2333333 2232 34455678999999999999999999999988874
No 151
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.01 E-value=2.3e-08 Score=101.42 Aligned_cols=210 Identities=14% Similarity=0.085 Sum_probs=123.5
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
+..+.++. + .+..+-|.|... ...+.|+|| |+..-.-..+.+- .+ -+.+.++|.++|+.|+++|.+.-+...
T Consensus 191 Pg~VV~~n-~--l~eLiqY~P~te--~v~~~PLLI-VPp~INK~YIlDL-~P-~~SlVr~lv~qG~~VflIsW~nP~~~~ 262 (560)
T TIGR01839 191 EGAVVFRN-E--VLELIQYKPITE--QQHARPLLV-VPPQINKFYIFDL-SP-EKSFVQYCLKNQLQVFIISWRNPDKAH 262 (560)
T ss_pred CCceeEEC-C--ceEEEEeCCCCC--CcCCCcEEE-echhhhhhheeec-CC-cchHHHHHHHcCCeEEEEeCCCCChhh
Confidence 44455554 2 244455677542 113446655 6664322221111 11 134589999999999999998644322
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHH----HHhcCCC-eeEEEEEcCccCCcccc
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAI----TLARFPD-VFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~----~~~~~~~-~~~~~v~~~~~~~~~~~ 473 (571)
..+. ..++ ++.+.++++.+.+.. ...+|.++|+|+||.+++. +++.+++ +++.++......|+...
T Consensus 263 r~~~---ldDY----v~~i~~Ald~V~~~t--G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 263 REWG---LSTY----VDALKEAVDAVRAIT--GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred cCCC---HHHH----HHHHHHHHHHHHHhc--CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCC
Confidence 2111 1111 234566676666542 4578999999999999986 6677775 78888876665553210
Q ss_pred c-------------------------------------------chhhhhh-cCCCC--CC-------------------
Q 008274 474 D-------------------------------------------TFYTEKY-MGLPS--ED------------------- 488 (571)
Q Consensus 474 ~-------------------------------------------~~~~~~~-~g~~~--~~------------------- 488 (571)
. ..+...| +|... .+
T Consensus 334 g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~ 413 (560)
T TIGR01839 334 SPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDL 413 (560)
T ss_pred CcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHH
Confidence 0 0000011 11110 00
Q ss_pred hhhhccCCcc-----------hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 489 PVGYEYSSVM-----------HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 489 ~~~~~~~s~~-----------~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.+.|..+... -.+.+|++|+|++.|+.|.++|...+..+.+.+ +.+.++++.++ ||.
T Consensus 414 l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~---gs~~~fvl~~g-GHI 481 (560)
T TIGR01839 414 LDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLL---GGKRRFVLSNS-GHI 481 (560)
T ss_pred HHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHc---CCCeEEEecCC-Ccc
Confidence 0112222221 136778999999999999999999999998866 55788888866 885
No 152
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.96 E-value=2.1e-08 Score=87.70 Aligned_cols=152 Identities=18% Similarity=0.104 Sum_probs=91.7
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCC
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLA 430 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~ 430 (571)
|+++||..++.. +.|.. .+.+.+... +.|-.++.- ..++.+.+..|.+. ..+
T Consensus 1 v~IvhG~~~s~~--~HW~~---wl~~~l~~~-~~V~~~~~~---------------------~P~~~~W~~~l~~~i~~~ 53 (171)
T PF06821_consen 1 VLIVHGYGGSPP--DHWQP---WLERQLENS-VRVEQPDWD---------------------NPDLDEWVQALDQAIDAI 53 (171)
T ss_dssp EEEE--TTSSTT--TSTHH---HHHHHHTTS-EEEEEC--T---------------------S--HHHHHHHHHHCCHC-
T ss_pred CEEeCCCCCCCc--cHHHH---HHHHhCCCC-eEEeccccC---------------------CCCHHHHHHHHHHHHhhc
Confidence 578999766643 44543 335566655 677766551 12344455555554 223
Q ss_pred cCCcEEEEeechHHHHHHHHH-hcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEE
Q 008274 431 KVGHIGLYGWSYGGYLSAITL-ARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~l 509 (571)
| +.+.++|||+|+..++.++ ......++++++++|+..-. .. .. ........+.. ...+..|.+
T Consensus 54 ~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~--------~~-~~----~~~~~~f~~~p-~~~l~~~~~ 118 (171)
T PF06821_consen 54 D-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDD--------PE-PF----PPELDGFTPLP-RDPLPFPSI 118 (171)
T ss_dssp T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGC--------HH-CC----TCGGCCCTTSH-CCHHHCCEE
T ss_pred C-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCccc--------cc-ch----hhhccccccCc-ccccCCCeE
Confidence 3 4599999999999999999 66788999999999984310 00 00 00111111111 123345669
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
++.+++|+.||++.+..+++++ ..+++.++++||..
T Consensus 119 viaS~nDp~vp~~~a~~~A~~l-----~a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 119 VIASDNDPYVPFERAQRLAQRL-----GAELIILGGGGHFN 154 (171)
T ss_dssp EEEETTBSSS-HHHHHHHHHHH-----T-EEEEETS-TTSS
T ss_pred EEEcCCCCccCHHHHHHHHHHc-----CCCeEECCCCCCcc
Confidence 9999999999999999999988 35788999999975
No 153
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.96 E-value=2.9e-08 Score=86.22 Aligned_cols=126 Identities=19% Similarity=0.207 Sum_probs=89.7
Q ss_pred HHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhcc
Q 008274 418 LTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEY 494 (571)
Q Consensus 418 ~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 494 (571)
.+.+..|+++ ..++.+||++-|.|+||.+++.++..++.........+++..-. ...+-+.
T Consensus 75 a~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~------~~~~~~~---------- 138 (206)
T KOG2112|consen 75 ADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRA------SIGLPGW---------- 138 (206)
T ss_pred HHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccc------hhhccCC----------
Confidence 3344555543 45788999999999999999999998866555555555543200 0000000
Q ss_pred CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 495 SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 495 ~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
-+ .. + .+|+++.||+.|+.||..-.+...+.|+..+.++++..|++.+|.... +-...+..|+.+
T Consensus 139 -~~--~~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~-----~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 139 -LP--GV-N-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP-----QELDDLKSWIKT 203 (206)
T ss_pred -cc--cc-C-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH-----HHHHHHHHHHHH
Confidence 00 00 1 679999999999999999999999999999999999999999998732 234567777765
No 154
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.91 E-value=4e-08 Score=93.96 Aligned_cols=125 Identities=17% Similarity=0.186 Sum_probs=94.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
..|.++|.++++.+++.- .-+.+..+.-|||||.++...+|- +|+.+|+++|.++.+.+.+.+--.+
T Consensus 382 D~l~iyd~~~~e~kr~e~---------~lg~I~av~vs~dGK~~vvaNdr~----el~vididngnv~~idkS~~~lItd 448 (668)
T COG4946 382 DKLGIYDKDGGEVKRIEK---------DLGNIEAVKVSPDGKKVVVANDRF----ELWVIDIDNGNVRLIDKSEYGLITD 448 (668)
T ss_pred ceEEEEecCCceEEEeeC---------CccceEEEEEcCCCcEEEEEcCce----EEEEEEecCCCeeEecccccceeEE
Confidence 368999999999888733 456788899999999888876555 5999999999999887655431111
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
+ .|++++ ++..+-.+|+ ++|-+++.++++.-.+|......-++ .++|||++|||.+.+
T Consensus 449 ------f-----~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsP-aFD~d~ryLYfLs~R 509 (668)
T COG4946 449 ------F-----DWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSP-AFDPDGRYLYFLSAR 509 (668)
T ss_pred ------E-----EEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCc-ccCCCCcEEEEEecc
Confidence 1 244554 6655666774 78899999999998888765444445 499999999999985
No 155
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.90 E-value=2.7e-09 Score=104.56 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=88.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC-cEEEEECCCCC-CCC-h-hhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-ILVWKLDNRGT-ARR-G-LKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~rG~-~~~-~-~~~~~~~~~ 407 (571)
|..-+|.|+. ..++.||||++|||..... ......++ ...|+++| ++||++|||-. -|+ . ..+. ....
T Consensus 80 L~LNIwaP~~---~a~~~PVmV~IHGG~y~~G--s~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~-~~~~ 151 (491)
T COG2272 80 LYLNIWAPEV---PAEKLPVMVYIHGGGYIMG--SGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLD-TEDA 151 (491)
T ss_pred eeEEeeccCC---CCCCCcEEEEEeccccccC--CCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhcc-cccc
Confidence 6777889982 2267899999999865433 12222333 57788888 99999999932 221 1 0010 0011
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccCC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~~ 469 (571)
......+.|++.+|+|+.+. ..-|++.|.|+|+|+||+.++.+++. ...+|+.+|+.+|...
T Consensus 152 ~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 152 FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 11123489999999999875 44699999999999999999988874 2347888888777653
No 156
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.90 E-value=7e-09 Score=98.87 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=77.5
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhH-HHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQ-YLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
..|++|++||..++.. ..|. ..++. ++...+|.|+++|+++..... +..+.. +. ....+++...++++.+
T Consensus 35 ~~p~vilIHG~~~~~~--~~~~---~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~-~~-~~v~~~la~~l~~L~~ 105 (275)
T cd00707 35 SRPTRFIIHGWTSSGE--ESWI---SDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVN-NT-RVVGAELAKFLDFLVD 105 (275)
T ss_pred CCCcEEEEcCCCCCCC--CcHH---HHHHHHHHhcCCCEEEEEECccccccC--hHHHHH-hH-HHHHHHHHHHHHHHHH
Confidence 4588999999766531 2332 22233 344568999999999863222 111111 00 0013567788888877
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
...++.+++.++|||+||+++..++.+.|++++.++..+|...
T Consensus 106 ~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 106 NTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred hcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 6445778999999999999999999999999999999887653
No 157
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.89 E-value=6.4e-08 Score=92.00 Aligned_cols=195 Identities=17% Similarity=0.156 Sum_probs=108.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
|.|+++||.+.... .|.. ....+... .|.++.+|.||+|.+. .. ..........+..+.+.
T Consensus 22 ~~i~~~hg~~~~~~---~~~~----~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---------~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 22 PPLVLLHGFPGSSS---VWRP----VFKVLPALAARYRVIAPDLRGHGRSD-PA---------GYSLSAYADDLAALLDA 84 (282)
T ss_pred CeEEEeCCCCCchh---hhHH----HHHHhhccccceEEEEecccCCCCCC-cc---------cccHHHHHHHHHHHHHH
Confidence 58899999887644 2221 11222221 1999999999998775 00 00111112233333332
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC------------ccc-c------cchh-----hh----
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS------------WDG-Y------DTFY-----TE---- 479 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~------------~~~-~------~~~~-----~~---- 479 (571)
- ...++.++|||+||.++..++.++|+++++++..++... ... . .... ..
T Consensus 85 ~--~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T COG0596 85 L--GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAA 162 (282)
T ss_pred h--CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhc
Confidence 1 223499999999999999999999999999888775432 000 0 0000 00
Q ss_pred hh-cCC---------CCCCh----hhh-------c------------cCCcchhhccCCCcEEEEecCCCCCCChHHHHH
Q 008274 480 KY-MGL---------PSEDP----VGY-------E------------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 480 ~~-~g~---------~~~~~----~~~-------~------------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~ 526 (571)
.. ... ..... ... . .........++.+|+++++|++|...+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~ 242 (282)
T COG0596 163 LGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARR 242 (282)
T ss_pred ccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHH
Confidence 00 000 00000 000 0 000112244456899999999996666554334
Q ss_pred HHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 527 LINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
+.+.+.. ..++.++++++|... .++...+.+.+.+|+
T Consensus 243 ~~~~~~~---~~~~~~~~~~gH~~~-~~~p~~~~~~i~~~~ 279 (282)
T COG0596 243 LAAALPN---DARLVVIPGAGHFPH-LEAPEAFAAALLAFL 279 (282)
T ss_pred HHhhCCC---CceEEEeCCCCCcch-hhcHHHHHHHHHHHH
Confidence 4333211 479999999999873 344556777777744
No 158
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.88 E-value=3.8e-08 Score=87.94 Aligned_cols=181 Identities=15% Similarity=0.134 Sum_probs=114.0
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccC
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 409 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~ 409 (571)
.+.+..++.|... +.+|+|+++||..-. ...|..+.+.+++.||+|++|+.-.... .-
T Consensus 31 pPkpLlI~tP~~~----G~yPVilF~HG~~l~-------ns~Ys~lL~HIASHGfIVVAPQl~~~~~-----------p~ 88 (307)
T PF07224_consen 31 PPKPLLIVTPSEA----GTYPVILFLHGFNLY-------NSFYSQLLAHIASHGFIVVAPQLYTLFP-----------PD 88 (307)
T ss_pred CCCCeEEecCCcC----CCccEEEEeechhhh-------hHHHHHHHHHHhhcCeEEEechhhcccC-----------CC
Confidence 4466777888653 689999999994322 2235566788899999999999763211 11
Q ss_pred CCCCchhHHHHHHHHHHc--------CCCcCCcEEEEeechHHHHHHHHHhcCC--CeeEEEEEcCccCCcccccchhhh
Q 008274 410 GRIDAEDQLTGAEWLIKQ--------GLAKVGHIGLYGWSYGGYLSAITLARFP--DVFQCAVSGAPVTSWDGYDTFYTE 479 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~--------~~~d~~~i~l~G~S~GG~~a~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~ 479 (571)
+..++++..+.++||.+. -..+..+++++|||.||..|..+|+.+. -.|.+.|.+.|+..........
T Consensus 89 ~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~-- 166 (307)
T PF07224_consen 89 GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTP-- 166 (307)
T ss_pred chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCC--
Confidence 223466777888888653 1246789999999999999999998763 2478888888886532211110
Q ss_pred hhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCC-------CCCCh--HHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 480 KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMID-------ENVHF--RHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 480 ~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D-------~~v~~--~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
|. .-.|. | +--++..|+++|...-- .-+.+ -+-+++++.. ..++...+-.+-||.
T Consensus 167 -----P~--iLty~---p--~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eC---k~p~~hfV~~dYGHm 230 (307)
T PF07224_consen 167 -----PP--ILTYV---P--QSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNEC---KPPCAHFVAKDYGHM 230 (307)
T ss_pred -----CC--eeecC---C--cccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhh---cccceeeeecccccc
Confidence 00 01111 1 11244578888865433 11111 2456676665 455666677777885
No 159
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.87 E-value=7.8e-08 Score=85.93 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=103.8
Q ss_pred hhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-C-CCcCCcEEEEeechHHHHHHHHHh
Q 008274 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-G-LAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 375 ~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~-~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+...|.. -+.++.+.++|.+..-. .....|+.+.++.+..+ . ..-....+++||||||.+|.-++.
T Consensus 26 W~~~lp~-~iel~avqlPGR~~r~~-----------ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvAr 93 (244)
T COG3208 26 WSRRLPA-DIELLAVQLPGRGDRFG-----------EPLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVAR 93 (244)
T ss_pred HHhhCCc-hhheeeecCCCcccccC-----------CcccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHH
Confidence 3444433 58999999998765421 12256777777777664 2 233458999999999999988875
Q ss_pred cC------CCeeEEEEEcCccCCcccc-----cchhhh---hhcCCCC---CChhhhccC-----------Ccchh--hc
Q 008274 453 RF------PDVFQCAVSGAPVTSWDGY-----DTFYTE---KYMGLPS---EDPVGYEYS-----------SVMHH--VH 502 (571)
Q Consensus 453 ~~------~~~~~~~v~~~~~~~~~~~-----~~~~~~---~~~g~~~---~~~~~~~~~-----------s~~~~--~~ 502 (571)
+. |..+-.....+|..+.... +..+.+ .+-|.|. ++++...-. .-+.. -.
T Consensus 94 rl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~ 173 (244)
T COG3208 94 RLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPA 173 (244)
T ss_pred HHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCC
Confidence 42 2112222223342221110 111111 2224442 233322111 11111 13
Q ss_pred cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 503 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 503 ~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+.+|+.++.|++|..|..++...+.+.. +..+++.+|+| ||.+. .++.+.+.+.+.+.+.
T Consensus 174 pl~~pi~~~~G~~D~~vs~~~~~~W~~~t---~~~f~l~~fdG-gHFfl-~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 174 PLACPIHAFGGEKDHEVSRDELGAWREHT---KGDFTLRVFDG-GHFFL-NQQREEVLARLEQHLA 234 (244)
T ss_pred CcCcceEEeccCcchhccHHHHHHHHHhh---cCCceEEEecC-cceeh-hhhHHHHHHHHHHHhh
Confidence 56789999999999999877776666554 56899999988 99873 3555566666666553
No 160
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.84 E-value=4.6e-08 Score=92.70 Aligned_cols=223 Identities=20% Similarity=0.270 Sum_probs=130.0
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH--HHHh--
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE--ASIK-- 406 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~--~~~~-- 406 (571)
..+..++.|..- ..+..|++|++.|.+.. .|..+...++.-|.+.|++.+.+..+-+|.+-.... +...
T Consensus 76 ~a~~~~~~P~~~--~~~~rp~~IhLagTGDh-----~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 76 TARFQLLLPKRW--DSPYRPVCIHLAGTGDH-----GFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred heEEEEEECCcc--ccCCCceEEEecCCCcc-----chhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccch
Confidence 355666777653 12467999999885432 122233444777888899999998775543321110 0000
Q ss_pred ---ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC--------------C
Q 008274 407 ---HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT--------------S 469 (571)
Q Consensus 407 ---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~--------------~ 469 (571)
-.++...+.+....++|+.++++ .+++|.|.||||.+|..+++..|..+.++-..++.+ +
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~ 225 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSIN 225 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCC
Confidence 01122235677778899988853 589999999999999999999988765555444322 2
Q ss_pred cccccc-----hhhhhhcCCCCC--------------Chhh----hccCCcchhhccCCC-----cEEEEecCCCCCCCh
Q 008274 470 WDGYDT-----FYTEKYMGLPSE--------------DPVG----YEYSSVMHHVHKMKG-----KLLLVHGMIDENVHF 521 (571)
Q Consensus 470 ~~~~~~-----~~~~~~~g~~~~--------------~~~~----~~~~s~~~~~~~~~~-----p~lli~G~~D~~v~~ 521 (571)
|..... .|.+.....+.. +.+. .....-..++.++.+ .+.++.+++|..||.
T Consensus 226 W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr 305 (348)
T PF09752_consen 226 WDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPR 305 (348)
T ss_pred HHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEech
Confidence 221111 111110000000 0000 000111223444433 478899999999998
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+...|.+.. ..++++.+++ ||--..-.+...+.+.|.+=|+
T Consensus 306 ~~v~~Lq~~W----PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 306 HGVLSLQEIW----PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred hhcchHHHhC----CCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 8776665554 5677778877 9964444456667777776554
No 161
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.82 E-value=8e-09 Score=95.18 Aligned_cols=184 Identities=18% Similarity=0.176 Sum_probs=118.1
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
-+...+.+.||.++......-.....+ ....+||.+-|..+...+. .+..-++.||.|+.++++|.+++.
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~-ngq~LvIC~EGNAGFYEvG---------~m~tP~~lgYsvLGwNhPGFagST 283 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSG-NGQDLVICFEGNAGFYEVG---------VMNTPAQLGYSVLGWNHPGFAGST 283 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCC-CCceEEEEecCCccceEee---------eecChHHhCceeeccCCCCccccC
Confidence 456788888999898877654332222 2346889999976655431 134556889999999999998775
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhh
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT 478 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 478 (571)
+-.. ...+...+.+.+++.+..-....+.|.+.|||-||+-++++|..+|+. +++|+.+.+-|.........
T Consensus 284 G~P~-------p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAtFDDllpLAl~rM 355 (517)
T KOG1553|consen 284 GLPY-------PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDATFDDLLPLALFRM 355 (517)
T ss_pred CCCC-------cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecchhhhhhHHhhhc
Confidence 3211 112345566777787776334667899999999999999999999986 89998887766432211100
Q ss_pred hhhc-CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCC
Q 008274 479 EKYM-GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 479 ~~~~-g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
...+ |.-......+-.-+..+.+.+.+.|+++|--++|+++.
T Consensus 356 P~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIit 398 (517)
T KOG1553|consen 356 PTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIIT 398 (517)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhh
Confidence 0000 00000001111122334567778899999998887764
No 162
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.81 E-value=4.4e-08 Score=89.72 Aligned_cols=175 Identities=17% Similarity=0.075 Sum_probs=89.7
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC--CChhh---------h-HHHHhccCCC----
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA--RRGLK---------F-EASIKHNCGR---- 411 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~~~~---------~-~~~~~~~~~~---- 411 (571)
+++-||++||...+.. -|..+...+...|.+.++..+.+|.+-.. +.+-. . .......|..
T Consensus 3 ~k~riLcLHG~~~na~---if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE---IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HH---HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHH---HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 3578999999877654 34445555566666658999999876322 11100 0 1111122222
Q ss_pred -CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCccCCcccccchhhhhhc
Q 008274 412 -IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPVTSWDGYDTFYTEKYM 482 (571)
Q Consensus 412 -~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 482 (571)
....++.++++++.+.-.-+..-.+|+|+|.||.+|..++... ...|+.+|..+++...... +.
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---~~---- 152 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---YQ---- 152 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----GT----
T ss_pred cccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---hh----
Confidence 1245666777666553100122478999999999998887531 2357888888876532110 00
Q ss_pred CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
+.+ ...+|++|+|-++|++|..++.+.++.+++.+... .+++..++ ||.+
T Consensus 153 -------~~~-------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~v 202 (212)
T PF03959_consen 153 -------ELY-------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHV 202 (212)
T ss_dssp -------TTT---------TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS-
T ss_pred -------hhh-------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcC
Confidence 001 24557899999999999999999999999988764 67777766 8876
No 163
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.80 E-value=8.4e-09 Score=109.68 Aligned_cols=127 Identities=19% Similarity=0.196 Sum_probs=82.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC----CCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT----ARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~----~~~~~~~~~~~~~ 407 (571)
|..-+|.|..... ..++||+|++|||....... . .........+++++++||+++||-. -..+.. . ..
T Consensus 109 L~LnI~~P~~~~~-~~~lPV~v~ihGG~f~~G~~-~--~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~-~--~~- 180 (535)
T PF00135_consen 109 LYLNIYTPSNASS-NSKLPVMVWIHGGGFMFGSG-S--FPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDL-D--AP- 180 (535)
T ss_dssp -EEEEEEETSSSS-TTSEEEEEEE--STTTSSCT-T--SGGGHTHHHHHHHTSEEEEE----HHHHH-BSSST-T--SH-
T ss_pred HHHhhhhcccccc-ccccceEEEeecccccCCCc-c--cccccccccccCCCEEEEEeccccccccccccccc-c--cC-
Confidence 7778899987532 23799999999987765422 0 0112234567789999999999931 111100 0 00
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCcc
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPV 467 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~ 467 (571)
.+...+.|+..|++|+.+. ..-|+++|.|+|+|+||..+...+... ..+|+.+|+.+|.
T Consensus 181 -~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 181 -SGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp -BSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred -chhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 1334488999999999886 345999999999999999998887652 3689999998873
No 164
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.80 E-value=9e-07 Score=85.32 Aligned_cols=210 Identities=10% Similarity=0.042 Sum_probs=107.6
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY 106 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~ 106 (571)
...|++||++|.|.+..++. .+||++||++++.++|+-. +
T Consensus 40 ~~~ft~dG~kllF~s~~dg~---------------------------------~nly~lDL~t~~i~QLTdg-------~ 79 (386)
T PF14583_consen 40 QNCFTDDGRKLLFASDFDGN---------------------------------RNLYLLDLATGEITQLTDG-------P 79 (386)
T ss_dssp S--B-TTS-EEEEEE-TTSS----------------------------------EEEEEETTT-EEEE---S-------S
T ss_pred CCCcCCCCCEEEEEeccCCC---------------------------------cceEEEEcccCEEEECccC-------C
Confidence 34589999999996543222 3789999999999999763 1
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EE-EE-Ee
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FI-WA-SE 183 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~-~~-s~ 183 (571)
.+... ...+||+++.++++.+.. .|+.+|++|++.+.|+..++. |...+ .+.. ..|. .+ .+ ..
T Consensus 80 g~~~~-g~~~s~~~~~~~Yv~~~~----~l~~vdL~T~e~~~vy~~p~~-~~g~g-t~v~-------n~d~t~~~g~e~~ 145 (386)
T PF14583_consen 80 GDNTF-GGFLSPDDRALYYVKNGR----SLRRVDLDTLEERVVYEVPDD-WKGYG-TWVA-------NSDCTKLVGIEIS 145 (386)
T ss_dssp -B-TT-T-EE-TTSSEEEEEETTT----EEEEEETTT--EEEEEE--TT-EEEEE-EEEE--------TTSSEEEEEEEE
T ss_pred CCCcc-ceEEecCCCeEEEEECCC----eEEEEECCcCcEEEEEECCcc-ccccc-ceee-------CCCccEEEEEEEe
Confidence 12111 357899999887765432 499999999999998876543 43211 0111 1122 22 11 11
Q ss_pred c-C--------C---------ccEEEEEeCCCceeeceeecCeEEEEEEEEee-cCcEEEEEEcC-CCCceeEEEEEEeC
Q 008274 184 K-T--------G---------FRHLYLHDINGTCLGPITEGDWMVEQIVGVNE-ASGQVYFTGTL-DGPLESHLYCAKLY 243 (571)
Q Consensus 184 ~-~--------g---------~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~~-~~~~~~~l~~~~l~ 243 (571)
+ + + ...|+.+++.+++.+.|-....-...+. +|| |...|.|.-.- .+.....++.++.
T Consensus 146 ~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~-fsP~dp~li~fCHEGpw~~Vd~RiW~i~~- 223 (386)
T PF14583_consen 146 REDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQ-FSPTDPTLIMFCHEGPWDLVDQRIWTINT- 223 (386)
T ss_dssp GGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEE-EETTEEEEEEEEE-S-TTTSS-SEEEEET-
T ss_pred ehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcc-cCCCCCCEEEEeccCCcceeceEEEEEEc-
Confidence 1 1 1 2588999999999887766544455554 555 45667776542 2333468999997
Q ss_pred CCCCCCCCCCeEecC---CCceEEEEECCCCCEEEEEeeCCCC-CCEEEEEEcCCCce
Q 008274 244 PDWNHTLEAPVKLTN---GKGKHVAVLDHNMRNFVDFHDSLDS-PPRILLCSLQDGSL 297 (571)
Q Consensus 244 ~~g~~~~~~~~~lt~---~~g~~~~~~s~~g~~~v~~~s~~~~-p~~l~~~~~~~~~~ 297 (571)
+|+ ..+.+.. ++....-.|++||+.+.|....+.+ .--|+.+++.+++.
T Consensus 224 -dg~----~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~ 276 (386)
T PF14583_consen 224 -DGS----NVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGER 276 (386)
T ss_dssp -TS-------EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--E
T ss_pred -CCC----cceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCc
Confidence 665 3333332 2222233899999999996543332 33455566665543
No 165
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.73 E-value=5.2e-08 Score=97.14 Aligned_cols=113 Identities=17% Similarity=0.177 Sum_probs=75.1
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHH--hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR--SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~--~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
..|++|++||...+.. ...|.. .+...|. ...+.|+++|++|++.+... .+. .+ .....+++.+.+++|.
T Consensus 40 ~~ptvIlIHG~~~s~~-~~~w~~---~l~~al~~~~~d~nVI~VDw~g~g~s~y~--~a~-~~-t~~vg~~la~lI~~L~ 111 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGM-FESWVP---KLVAALYEREPSANVIVVDWLSRAQQHYP--TSA-AY-TKLVGKDVAKFVNWMQ 111 (442)
T ss_pred CCCeEEEECCCCcCCc-chhhHH---HHHHHHHhccCCCEEEEEECCCcCCCCCc--ccc-cc-HHHHHHHHHHHHHHHH
Confidence 3488899999755321 122321 1233333 23699999999988754311 110 00 0111356677788876
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
++..++.+++.|+|||+||++|..++...|.++..++..+|..
T Consensus 112 ~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 112 EEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 6544577899999999999999999998999999999988864
No 166
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.71 E-value=4.5e-07 Score=87.64 Aligned_cols=198 Identities=20% Similarity=0.183 Sum_probs=115.2
Q ss_pred EEEEEc-CCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC--CChhhhHHHHhccC
Q 008274 333 YGALYK-PDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA--RRGLKFEASIKHNC 409 (571)
Q Consensus 333 ~~~~~~-P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~~~~~~~~~~~~~ 409 (571)
..|+.. |... .++.-|+||++|||+........--.....+...+ + ..+++..||.-.. ..+..+..+
T Consensus 107 s~Wlvk~P~~~--~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~~~~yPtQ----- 177 (374)
T PF10340_consen 107 SYWLVKAPNRF--KPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEHGHKYPTQ----- 177 (374)
T ss_pred eEEEEeCCccc--CCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccCCCcCchH-----
Confidence 367776 6552 23445999999998765432211100111112222 3 5589999997543 222222222
Q ss_pred CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc--CC---CeeEEEEEcCccCCccccc----------
Q 008274 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR--FP---DVFQCAVSGAPVTSWDGYD---------- 474 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~--~~---~~~~~~v~~~~~~~~~~~~---------- 474 (571)
+.++.+..++|.+.. ..+.|.++|-|+||.+++.++.. ++ ..-+.+|+++|.++.....
T Consensus 178 ----L~qlv~~Y~~Lv~~~--G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n 251 (374)
T PF10340_consen 178 ----LRQLVATYDYLVESE--GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDN 251 (374)
T ss_pred ----HHHHHHHHHHHHhcc--CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccccc
Confidence 567899999999442 24689999999999999877642 11 1247899999987654110
Q ss_pred -----------chhhhhhcCCCCCChhhhccCCcc---------hhhcc-C-CCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 475 -----------TFYTEKYMGLPSEDPVGYEYSSVM---------HHVHK-M-KGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 475 -----------~~~~~~~~g~~~~~~~~~~~~s~~---------~~~~~-~-~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
..+.+.|.+.- +++......|. ..-.. + ++.++++.|+.+-.. .+.+++++.+.
T Consensus 252 ~~~D~l~~~~~~~~~~~y~~~~--~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evfr--ddI~~~~~~~~ 327 (374)
T PF10340_consen 252 EKRDMLSYKGLSMFGDAYIGNN--DPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFR--DDILEWAKKLN 327 (374)
T ss_pred ccccccchhhHHHHHHhhcccc--ccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccH--HHHHHHHHHHh
Confidence 01222333320 01000001110 01111 1 258999999987664 47888999988
Q ss_pred HcCC-----CeeEEEcCCCCCC
Q 008274 533 AARK-----PYEILIFPDERHM 549 (571)
Q Consensus 533 ~~~~-----~~~~~~~~~~~H~ 549 (571)
..+. ...+.+.+++.|.
T Consensus 328 ~~~~~~~~~~~nv~~~~~G~Hi 349 (374)
T PF10340_consen 328 DVKPNKFSNSNNVYIDEGGIHI 349 (374)
T ss_pred hcCccccCCcceEEEecCCccc
Confidence 6553 3677788888895
No 167
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.65 E-value=3.9e-06 Score=75.49 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=89.2
Q ss_pred CceEEECCCCCeEEEEEEeC-CCC-CeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDS-SEI-PRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.-.+-|+|+|++|+.....+ ... ..+. +...|+.++..+.....+.+.
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~--------------------------~~~~l~~~~~~~~~~~~i~l~---- 57 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYY--------------------------GEFELFYLNEKNIPVESIELK---- 57 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEE--------------------------eeEEEEEEecCCCccceeecc----
Confidence 45688999999999876521 111 1110 124688888887777666553
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
....+.+++|+|+|+.++.+...... .|.++|+++. .+..-..... + ...|+|++ ++++
T Consensus 58 ----~~~~I~~~~WsP~g~~favi~g~~~~--~v~lyd~~~~---~i~~~~~~~~-n----------~i~wsP~G~~l~~ 117 (194)
T PF08662_consen 58 ----KEGPIHDVAWSPNGNEFAVIYGSMPA--KVTLYDVKGK---KIFSFGTQPR-N----------TISWSPDGRFLVL 117 (194)
T ss_pred ----CCCceEEEEECcCCCEEEEEEccCCc--ccEEEcCccc---EeEeecCCCc-e----------EEEECCCCCEEEE
Confidence 34468899999999977766543323 4666677532 2222111111 1 11456666 6665
Q ss_pred EecCC-ccEEEEEeCCCceeeceee-cCeEEEEEEEEeecCcEEEEEEcC
Q 008274 182 SEKTG-FRHLYLHDINGTCLGPITE-GDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 182 s~~~g-~~~l~~~~~~~~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
+.-.+ ...|.++|....+. +.. ....+..+ .|||||+++...++.
T Consensus 118 ~g~~n~~G~l~~wd~~~~~~--i~~~~~~~~t~~-~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 118 AGFGNLNGDLEFWDVRKKKK--ISTFEHSDATDV-EWSPDGRYLATATTS 164 (194)
T ss_pred EEccCCCcEEEEEECCCCEE--eeccccCcEEEE-EEcCCCCEEEEEEec
Confidence 54322 24677888765433 322 22234444 599999999988763
No 168
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.60 E-value=3.3e-06 Score=81.85 Aligned_cols=133 Identities=17% Similarity=0.086 Sum_probs=85.3
Q ss_pred CchhHHHHHHHHHHcCCC--cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC--ccc-ccc--hhh------h
Q 008274 413 DAEDQLTGAEWLIKQGLA--KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS--WDG-YDT--FYT------E 479 (571)
Q Consensus 413 ~~~D~~~~~~~l~~~~~~--d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~--~~~-~~~--~~~------~ 479 (571)
.+.|++.|+.++.+.-.. +.-++.++|+|+|||++..++--.|..|.+++-.++... |.. +.. .|. +
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~ 241 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGE 241 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCccccccccc
Confidence 466888888888886221 234899999999999999999888999999988765432 110 000 000 0
Q ss_pred h----------hcCCCCC---------ChhhhccCCcc--hh---hccC--CCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 008274 480 K----------YMGLPSE---------DPVGYEYSSVM--HH---VHKM--KGKLLLVHGMIDENVHFRHTARLINALVA 533 (571)
Q Consensus 480 ~----------~~g~~~~---------~~~~~~~~s~~--~~---~~~~--~~p~lli~G~~D~~v~~~~~~~~~~~l~~ 533 (571)
. +.-+.|. ..+.+.-.+.+ .+ ..+. ++-...+|+..|+.+|.+.-.+|++.+++
T Consensus 242 ~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~ 321 (403)
T PF11144_consen 242 FFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKN 321 (403)
T ss_pred ccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHH
Confidence 0 0011111 11111111111 11 1222 24567889999999999999999999999
Q ss_pred cCCCeeEEEcCC
Q 008274 534 ARKPYEILIFPD 545 (571)
Q Consensus 534 ~~~~~~~~~~~~ 545 (571)
+|-++++.++.+
T Consensus 322 lgfda~l~lIkd 333 (403)
T PF11144_consen 322 LGFDATLHLIKD 333 (403)
T ss_pred cCCCeEEEEecC
Confidence 999999998843
No 169
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.60 E-value=4.7e-07 Score=85.74 Aligned_cols=192 Identities=15% Similarity=0.120 Sum_probs=114.9
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHH---hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHH-HHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLR---SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA-EWL 424 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~l 424 (571)
.++++++.|.||... .|..+...|. ...+.|+++.+.|+......-... .+.....++|+++.. +++
T Consensus 2 ~~li~~IPGNPGlv~-------fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~--~~~~~~sL~~QI~hk~~~i 72 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-------FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS--PNGRLFSLQDQIEHKIDFI 72 (266)
T ss_pred cEEEEEECCCCChHH-------HHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc--CCCCccCHHHHHHHHHHHH
Confidence 478999999999754 2334455565 358999999999986554321000 122334466665443 333
Q ss_pred HHc---CCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCccc-----------------------c--
Q 008274 425 IKQ---GLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDG-----------------------Y-- 473 (571)
Q Consensus 425 ~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~~~-----------------------~-- 473 (571)
.+. ......++.++|||.|+++++.++-+.+ ..+..++..-|...... .
T Consensus 73 ~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~ 152 (266)
T PF10230_consen 73 KELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLS 152 (266)
T ss_pred HHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHH
Confidence 222 1114678999999999999999999988 66777777777542100 0
Q ss_pred ------cc----hhhhhhcCCCCCC----------h-----------hhh---ccCCcchhhccC---CCcEEEEecCCC
Q 008274 474 ------DT----FYTEKYMGLPSED----------P-----------VGY---EYSSVMHHVHKM---KGKLLLVHGMID 516 (571)
Q Consensus 474 ------~~----~~~~~~~g~~~~~----------~-----------~~~---~~~s~~~~~~~~---~~p~lli~G~~D 516 (571)
.. +.....++.+... + +.+ .+.+.....+.. ..++.++.|.+|
T Consensus 153 ~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D 232 (266)
T PF10230_consen 153 FLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQND 232 (266)
T ss_pred HHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCC
Confidence 00 0011122333110 0 000 000101111222 568999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 517 ENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 517 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..||.+..+++.+++.....++.+.. ++..|+|
T Consensus 233 ~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 233 HWVPNETRDELIERYPGHEPDVVVDE-EGIPHAF 265 (266)
T ss_pred CCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCCC
Confidence 99999998998888764445555555 7778876
No 170
>PRK04940 hypothetical protein; Provisional
Probab=98.60 E-value=9e-07 Score=76.48 Aligned_cols=115 Identities=21% Similarity=0.174 Sum_probs=74.3
Q ss_pred CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC-cccccchhhhhhcCCCCCChhhhccCCcchhhcc--CC--Cc
Q 008274 433 GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-WDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHK--MK--GK 507 (571)
Q Consensus 433 ~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~--~~--~p 507 (571)
++++|+|.|+||+.|.+++.++. .+ +|++.|... +.. ...+.|.+.. |....+ .+++. ++ ..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~~-aVLiNPAv~P~~~-----L~~~ig~~~~----y~~~~~-~h~~eL~~~~p~r 126 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--IR-QVIFNPNLFPEEN-----MEGKIDRPEE----YADIAT-KCVTNFREKNRDR 126 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--CC-EEEECCCCChHHH-----HHHHhCCCcc----hhhhhH-HHHHHhhhcCccc
Confidence 46999999999999999999875 23 455555543 221 1223332211 221111 11222 22 35
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++++..+.|++.+..++.+.+.. -.+..+.+|++|.|. +.+.....|++|+.+
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~------~y~~~v~~GGdH~f~---~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHP------YYEIVWDEEQTHKFK---NISPHLQRIKAFKTL 179 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhcc------CceEEEECCCCCCCC---CHHHHHHHHHHHHhc
Confidence 79999999999998877665532 125779999999984 467788999999853
No 171
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.59 E-value=3.2e-07 Score=89.35 Aligned_cols=78 Identities=27% Similarity=0.366 Sum_probs=62.7
Q ss_pred hccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCc--HHHHHHHHHHHHH
Q 008274 492 YEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRD--RIYMEERIWEFIE 568 (571)
Q Consensus 492 ~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~fl~ 568 (571)
+...++...+.++. +|+|++||.+|..||...+..++++.... +.+...+++++|....... ......++.+||.
T Consensus 218 ~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 218 LLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred hccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 45556666777787 69999999999999999999999887554 6788889999998754333 3478899999999
Q ss_pred HhC
Q 008274 569 RTL 571 (571)
Q Consensus 569 ~~l 571 (571)
++|
T Consensus 296 ~~l 298 (299)
T COG1073 296 RHL 298 (299)
T ss_pred Hhc
Confidence 875
No 172
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.56 E-value=2.6e-06 Score=73.75 Aligned_cols=167 Identities=18% Similarity=0.245 Sum_probs=104.8
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHH-HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHH
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEA-SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITL 451 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~ 451 (571)
...+..|+++|+.|+.+|-+- -|.+ ..+. ....|+..++++..++- ..+++.|+|.|+|+-+.-.+.
T Consensus 19 ~~~a~~l~~~G~~VvGvdsl~------Yfw~~rtP~----~~a~Dl~~~i~~y~~~w--~~~~vvLiGYSFGADvlP~~~ 86 (192)
T PF06057_consen 19 KQIAEALAKQGVPVVGVDSLR------YFWSERTPE----QTAADLARIIRHYRARW--GRKRVVLIGYSFGADVLPFIY 86 (192)
T ss_pred HHHHHHHHHCCCeEEEechHH------HHhhhCCHH----HHHHHHHHHHHHHHHHh--CCceEEEEeecCCchhHHHHH
Confidence 446899999999999999651 1211 1111 12678888888887764 467999999999998888887
Q ss_pred hcCCC----eeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHH
Q 008274 452 ARFPD----VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 452 ~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~ 526 (571)
.+-|. +++.+++.+|-.... |..... .+++...... ...+...+.++. .|+++|+|++|.-....
T Consensus 87 nrLp~~~r~~v~~v~Ll~p~~~~d-Feihv~-~wlg~~~~~~----~~~~~pei~~l~~~~v~CiyG~~E~d~~cp---- 156 (192)
T PF06057_consen 87 NRLPAALRARVAQVVLLSPSTTAD-FEIHVS-GWLGMGGDDA----AYPVIPEIAKLPPAPVQCIYGEDEDDSLCP---- 156 (192)
T ss_pred hhCCHHHHhheeEEEEeccCCcce-EEEEhh-hhcCCCCCcc----cCCchHHHHhCCCCeEEEEEcCCCCCCcCc----
Confidence 77664 566777776643221 111111 1223222211 124455677777 49999999987643221
Q ss_pred HHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 527 LINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+. ...++.+..|| ||.| ..+-..+.+.|++-+++
T Consensus 157 ---~l~--~~~~~~i~lpG-gHHf--d~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 157 ---SLR--QPGVEVIALPG-GHHF--DGDYDALAKRILDALKA 191 (192)
T ss_pred ---ccc--CCCcEEEEcCC-CcCC--CCCHHHHHHHHHHHHhc
Confidence 122 35788889999 5655 34556667777776653
No 173
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.51 E-value=1e-05 Score=76.60 Aligned_cols=157 Identities=12% Similarity=0.127 Sum_probs=87.5
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
....+.-+.||||.++++.+.... .+.+-|++||+.+.+.... .+.... .+ .|-||++-|+.-..
T Consensus 268 h~~~V~yi~wSPDdryLlaCg~~e----~~~lwDv~tgd~~~~y~~~-~~~S~~-----sc----~W~pDg~~~V~Gs~- 332 (519)
T KOG0293|consen 268 HSQPVSYIMWSPDDRYLLACGFDE----VLSLWDVDTGDLRHLYPSG-LGFSVS-----SC----AWCPDGFRFVTGSP- 332 (519)
T ss_pred ccCceEEEEECCCCCeEEecCchH----heeeccCCcchhhhhcccC-cCCCcc-----ee----EEccCCceeEecCC-
Confidence 445677789999999888775544 2888899999998876643 111111 11 45666644432111
Q ss_pred ccEEEEEeCCCceeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEE
Q 008274 187 FRHLYLHDINGTCLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVA 265 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~ 265 (571)
-++++..+++|.....--. ..--+.+. ..++||++++....... -.+|.... . .....++......+.
T Consensus 333 dr~i~~wdlDgn~~~~W~gvr~~~v~dl-ait~Dgk~vl~v~~d~~---i~l~~~e~----~---~dr~lise~~~its~ 401 (519)
T KOG0293|consen 333 DRTIIMWDLDGNILGNWEGVRDPKVHDL-AITYDGKYVLLVTVDKK---IRLYNREA----R---VDRGLISEEQPITSF 401 (519)
T ss_pred CCcEEEecCCcchhhcccccccceeEEE-EEcCCCcEEEEEecccc---eeeechhh----h---hhhccccccCceeEE
Confidence 2678889888753110000 00123444 37899999998874332 23332221 0 011134444456666
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
+.|.||+++..... +.++.+.++.
T Consensus 402 ~iS~d~k~~LvnL~----~qei~LWDl~ 425 (519)
T KOG0293|consen 402 SISKDGKLALVNLQ----DQEIHLWDLE 425 (519)
T ss_pred EEcCCCcEEEEEcc----cCeeEEeecc
Confidence 77777776654432 2355555554
No 174
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.51 E-value=4.7e-07 Score=67.69 Aligned_cols=58 Identities=29% Similarity=0.473 Sum_probs=48.3
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
|.+|....|.|+. ++..+|+++||..... ..|..+++.|+++||.|+++|+||+|.|.
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~-------~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHS-------GRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHH-------HHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 5678899999976 2568999999965443 35777899999999999999999999886
No 175
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.50 E-value=0.00016 Score=70.44 Aligned_cols=208 Identities=13% Similarity=0.105 Sum_probs=113.0
Q ss_pred EEEEEECCCCceE-EEeccCCCC-CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE---------EE
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGT-DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK---------VI 149 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~---------~l 149 (571)
.|-++|+++.+.. .+.+. +. +. ....+-..+..|||||.+++.. .. ....+-++|+++++.. .+
T Consensus 78 ~V~v~D~~t~~~~~~i~~p--~~p~~-~~~~~~~~~~ls~dgk~l~V~n-~~-p~~~V~VvD~~~~kvv~ei~vp~~~~v 152 (352)
T TIGR02658 78 YVEVIDPQTHLPIADIELP--EGPRF-LVGTYPWMTSLTPDNKTLLFYQ-FS-PSPAVGVVDLEGKAFVRMMDVPDCYHI 152 (352)
T ss_pred EEEEEECccCcEEeEEccC--CCchh-hccCccceEEECCCCCEEEEec-CC-CCCEEEEEECCCCcEEEEEeCCCCcEE
Confidence 5788999997764 34332 11 10 0122344678999999666543 22 1224777777776532 22
Q ss_pred EEee---------cCCeee------------ccCCcccC----CCCC--ccCCCeEEEEEecCCccEEEEEeCCCceeec
Q 008274 150 LVEE---------LDSWVN------------LHDCFTPL----DKGV--TKYSGGFIWASEKTGFRHLYLHDINGTCLGP 202 (571)
Q Consensus 150 ~~~~---------~~~w~~------------~~~~~~~~----~~~~--~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~ 202 (571)
.... +..+.. ..+.|... ...+ ...+++.+|.|.. ..|+.+|+.+.+...
T Consensus 153 y~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e---G~V~~id~~~~~~~~ 229 (352)
T TIGR02658 153 FPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT---GKIFQIDLSSGDAKF 229 (352)
T ss_pred EEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC---CeEEEEecCCCccee
Confidence 2111 011111 00111110 0111 1112347777655 578888865543222
Q ss_pred ------eeec----CeEEE--EEEEEeecCcEEEEEEcCCC-----CceeEEEEEEeCCCCCCCCCCCeEecCCCceEEE
Q 008274 203 ------ITEG----DWMVE--QIVGVNEASGQVYFTGTLDG-----PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVA 265 (571)
Q Consensus 203 ------lT~~----~~~~~--~~~~~s~dg~~l~~~~~~~~-----~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~ 265 (571)
++.+ .|.-. .+..+++||+++|+.+.... ....+++.+++. .+. ...++.-+......
T Consensus 230 ~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~-t~k----vi~~i~vG~~~~~i 304 (352)
T TIGR02658 230 LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAK-TGK----RLRKIELGHEIDSI 304 (352)
T ss_pred cceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECC-CCe----EEEEEeCCCceeeE
Confidence 2221 12111 23568999999999764211 113689999983 221 44555555667778
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
.+|+||+..+|+.+.. ...+.++|..+++.++.+..
T Consensus 305 avS~Dgkp~lyvtn~~--s~~VsViD~~t~k~i~~i~~ 340 (352)
T TIGR02658 305 NVSQDAKPLLYALSTG--DKTLYIFDAETGKELSSVNQ 340 (352)
T ss_pred EECCCCCeEEEEeCCC--CCcEEEEECcCCeEEeeecc
Confidence 9999999666766543 23699999988887776633
No 176
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.49 E-value=2.6e-06 Score=79.87 Aligned_cols=189 Identities=15% Similarity=0.095 Sum_probs=110.8
Q ss_pred cCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC
Q 008274 313 RLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392 (571)
Q Consensus 313 ~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 392 (571)
.......+++.++. |+..+.+....-+.. ++.--|+++-|..........+......+.+...+.|..|+.+|||
T Consensus 106 ~~~~~~~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYp 180 (365)
T PF05677_consen 106 DDEVSSVKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYP 180 (365)
T ss_pred cccccceeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCC
Confidence 33445678888888 888888887653222 3445777777754432210000001123445566799999999999
Q ss_pred CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCC----CeeEE-EEEcCc
Q 008274 393 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFP----DVFQC-AVSGAP 466 (571)
Q Consensus 393 G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~~~~~-~v~~~~ 466 (571)
|.|.|.+... ..+ .++|..+.++||.++ ..+.+++|++.|||.||.++..++.++. +-++- +|...+
T Consensus 181 GVg~S~G~~s---~~d----Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRs 253 (365)
T PF05677_consen 181 GVGSSTGPPS---RKD----LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRS 253 (365)
T ss_pred ccccCCCCCC---HHH----HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCC
Confidence 9887643321 122 278889999999875 4568899999999999999988766542 22332 222333
Q ss_pred cCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCC
Q 008274 467 VTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMI 515 (571)
Q Consensus 467 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~ 515 (571)
+.++......+.....+. ...-.=|..+..+.-+++.||-+++|+.+
T Consensus 254 fssl~~vas~~~~~~~~~--l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 254 FSSLAAVASQFFGPIGKL--LIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred cchHHHHHHHHHHHHHHH--HHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 333221111110000000 00000123345566788889999999874
No 177
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.49 E-value=8.2e-06 Score=85.63 Aligned_cols=158 Identities=12% Similarity=0.047 Sum_probs=93.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+..||||+++||+....... ...+.+||+++.. ++.++++.
T Consensus 352 vsspaiSpdG~~vA~v~~~~~~~----------------------------~d~~s~Lwv~~~g-g~~~~lt~------- 395 (591)
T PRK13616 352 ITSAALSRSGRQVAAVVTLGRGA----------------------------PDPASSLWVGPLG-GVAVQVLE------- 395 (591)
T ss_pred cccceECCCCCEEEEEEeecCCC----------------------------CCcceEEEEEeCC-Ccceeeec-------
Confidence 46788999999999987532111 0123589999974 44466633
Q ss_pred CCCCceeEEEEEccCCeEEEEEEecc--------CccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRS--------QTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~--------~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d 176 (571)
.. ....|+|||||+.++++.++. ....+|+.+++++|+.++ . .... . ..+.|++|
T Consensus 396 --g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~-~~g~-------I----ssl~wSpD 458 (591)
T PRK13616 396 --GH-SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--R-VPGP-------I----SELQLSRD 458 (591)
T ss_pred --CC-CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--c-cCCC-------c----CeEEECCC
Confidence 22 377899999999888876542 123467777777776553 1 0110 0 01135566
Q ss_pred e--EEEEEecCCccEEEE---EeCCCceeece------eecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCC
Q 008274 177 G--FIWASEKTGFRHLYL---HDINGTCLGPI------TEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 244 (571)
Q Consensus 177 ~--~~~~s~~~g~~~l~~---~~~~~~~~~~l------T~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~ 244 (571)
+ ++|++. | +||+ ...++++ ..| +.+.-. +.+. .|..++. |+..+. . .+..+|++++
T Consensus 459 G~RiA~i~~--g--~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l-~W~~~~~-L~V~~~-~--~~~~v~~v~v-- 526 (591)
T PRK13616 459 GVRAAMIIG--G--KVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSL-DWRTGDS-LVVGRS-D--PEHPVWYVNL-- 526 (591)
T ss_pred CCEEEEEEC--C--EEEEEEEEeCCCCc-eeecccEEeecccCCccccc-eEecCCE-EEEEec-C--CCCceEEEec--
Confidence 5 777663 3 6777 4545554 333 332222 2444 4887777 554433 2 2477999999
Q ss_pred CCC
Q 008274 245 DWN 247 (571)
Q Consensus 245 ~g~ 247 (571)
+|.
T Consensus 527 DG~ 529 (591)
T PRK13616 527 DGS 529 (591)
T ss_pred CCc
Confidence 775
No 178
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.46 E-value=4.2e-06 Score=82.72 Aligned_cols=71 Identities=20% Similarity=0.134 Sum_probs=57.1
Q ss_pred hhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 500 HVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 500 ~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+|+ +|+|.+.|++|.++++.++..+.+.+...+ .+.+..+.+++||. +.....++.++..|.+||.++
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 356788 999999999999999999999988764333 34456677788995 456677888999999999874
No 179
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.44 E-value=0.00017 Score=70.03 Aligned_cols=181 Identities=11% Similarity=0.058 Sum_probs=93.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|++||+.+++.... +. .......+.|+|||+.++.....+ ..|..+|+.+++..........
T Consensus 54 ~v~~~d~~~~~~~~~-~~--------~~~~~~~~~~~~~g~~l~~~~~~~---~~l~~~d~~~~~~~~~~~~~~~----- 116 (300)
T TIGR03866 54 TIQVIDLATGEVIGT-LP--------SGPDPELFALHPNGKILYIANEDD---NLVTVIDIETRKVLAEIPVGVE----- 116 (300)
T ss_pred eEEEEECCCCcEEEe-cc--------CCCCccEEEECCCCCEEEEEcCCC---CeEEEEECCCCeEEeEeeCCCC-----
Confidence 468899988876432 21 112234578999998665543322 2588899988654322111000
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeec-eeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~-lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+ ....+++++ +++.+..++ ..++.++..+++... +..+. .... ..|+++|+.|++.+..++ .++
T Consensus 117 -----~--~~~~~~~dg~~l~~~~~~~-~~~~~~d~~~~~~~~~~~~~~-~~~~-~~~s~dg~~l~~~~~~~~----~v~ 182 (300)
T TIGR03866 117 -----P--EGMAVSPDGKIVVNTSETT-NMAHFIDTKTYEIVDNVLVDQ-RPRF-AEFTADGKELWVSSEIGG----TVS 182 (300)
T ss_pred -----c--ceEEECCCCCEEEEEecCC-CeEEEEeCCCCeEEEEEEcCC-CccE-EEECCCCCEEEEEcCCCC----EEE
Confidence 0 001234554 444443322 234556766554322 21121 2223 358999999888765443 355
Q ss_pred EEEeCCCCCCCCCCCeEecCC-Cc-------eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 239 CAKLYPDWNHTLEAPVKLTNG-KG-------KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~-~g-------~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
.+++. .+. ....++.. .+ .....+++++++++...... ..+.++++.+++..+.
T Consensus 183 i~d~~-~~~----~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~---~~i~v~d~~~~~~~~~ 244 (300)
T TIGR03866 183 VIDVA-TRK----VIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA---NRVAVVDAKTYEVLDY 244 (300)
T ss_pred EEEcC-cce----eeeeeeecccccccccCCccceEECCCCCEEEEEcCCC---CeEEEEECCCCcEEEE
Confidence 55652 121 12222211 01 12357899998765443322 3688888866665433
No 180
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.44 E-value=9.1e-07 Score=94.06 Aligned_cols=99 Identities=19% Similarity=0.116 Sum_probs=65.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH----------Hhcc---------
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS----------IKHN--------- 408 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~----------~~~~--------- 408 (571)
..|+||++||..+... .|..+++.|+++||.|+++|+||+|.+....... .+-+
T Consensus 448 g~P~VVllHG~~g~~~-------~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRD 520 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-------NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARD 520 (792)
T ss_pred CCcEEEEeCCCCCCHH-------HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceecccccccccc
Confidence 4589999999666532 3455688899999999999999998773320000 0000
Q ss_pred CCCCCchhHHHHHHHHH------Hc----CCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 409 CGRIDAEDQLTGAEWLI------KQ----GLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~------~~----~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.-...+.|+......+. .+ ...+..++.++||||||.+++.++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 00112456665555554 11 12457799999999999999999875
No 181
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.43 E-value=5.4e-06 Score=72.78 Aligned_cols=185 Identities=17% Similarity=0.134 Sum_probs=108.9
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC------CCChh--hhHHH----------HhccC
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT------ARRGL--KFEAS----------IKHNC 409 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~------~~~~~--~~~~~----------~~~~~ 409 (571)
+.+-|+++||--.+. ..|......+...|.+. +..+.+|-+-. ..... .+..+ -..+-
T Consensus 4 ~k~rvLcLHGfrQsg---~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~ 79 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSG---KVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNE 79 (230)
T ss_pred CCceEEEecchhhcc---HHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccc
Confidence 457899999954432 24444444455666666 77787776621 00000 00000 00010
Q ss_pred -CCCCchh----HHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--C------CeeEEEEEcCccCCcccccch
Q 008274 410 -GRIDAED----QLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--P------DVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 410 -~~~~~~D----~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--~------~~~~~~v~~~~~~~~~~~~~~ 476 (571)
....+.- +....+|+.+++--| +|+|.|.|+.++..++... . .-|+-+|.++|+..+. ..
T Consensus 80 ~~~~~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~---~~ 152 (230)
T KOG2551|consen 80 ASFTEYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS---KK 152 (230)
T ss_pred cccccccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc---ch
Confidence 1111222 333444555554345 5999999999999888721 1 1256777777664321 00
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
..-..+...+++|.|-+.|+.|.+++.+.+..|++.+... .++.-|+ ||.+- +.
T Consensus 153 ------------------~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP---~~ 206 (230)
T KOG2551|consen 153 ------------------LDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPG-GHIVP---NK 206 (230)
T ss_pred ------------------hhhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC----eEEecCC-CccCC---Cc
Confidence 0011234568899999999999999999999999987433 5555555 99872 33
Q ss_pred HHHHHHHHHHHHH
Q 008274 557 IYMEERIWEFIER 569 (571)
Q Consensus 557 ~~~~~~i~~fl~~ 569 (571)
....+.+.+||+.
T Consensus 207 ~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 207 AKYKEKIADFIQS 219 (230)
T ss_pred hHHHHHHHHHHHH
Confidence 3666778888865
No 182
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.41 E-value=1.2e-05 Score=79.56 Aligned_cols=50 Identities=12% Similarity=0.210 Sum_probs=42.3
Q ss_pred hhccCCCcEEEEecCCCCCCChHHHHHHH-------HHHHHcCCCeeEEEcCCCCCC
Q 008274 500 HVHKMKGKLLLVHGMIDENVHFRHTARLI-------NALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 500 ~~~~~~~p~lli~G~~D~~v~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.+++|++|+.++.+..|.+.|++|+..+. +.++.+|...-+.+.+..||.
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 47889999999999999999999995443 456777778888899999995
No 183
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.39 E-value=1.8e-06 Score=80.17 Aligned_cols=205 Identities=17% Similarity=0.111 Sum_probs=112.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHH-hCCc----EEEEECCCCCCCChhhhH----HHHh----ccCCC---
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGI----LVWKLDNRGTARRGLKFE----ASIK----HNCGR--- 411 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~----~v~~~d~rG~~~~~~~~~----~~~~----~~~~~--- 411 (571)
..|+ ||+||..++.. .+..+++.+. +.|. .++.++.-|.-...+.+. .++. .+...
T Consensus 11 ~tPT-ifihG~~gt~~-------s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~ 82 (255)
T PF06028_consen 11 TTPT-IFIHGYGGTAN-------SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANY 82 (255)
T ss_dssp -EEE-EEE--TTGGCC-------CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHH
T ss_pred CCcE-EEECCCCCChh-------HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCH
Confidence 4466 56899777643 3455677776 5553 355555544321111111 0100 01000
Q ss_pred -CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCccc-ccchhhh---hh
Q 008274 412 -IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDG-YDTFYTE---KY 481 (571)
Q Consensus 412 -~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~-~~~~~~~---~~ 481 (571)
....-+..++.+|.++..+ +++-++||||||..++.++..+.. .+...|++++..+-.. ....... .-
T Consensus 83 ~~qa~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~ 160 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNK 160 (255)
T ss_dssp HHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CST
T ss_pred HHHHHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcc
Confidence 0134567788888887644 689999999999999999877422 4566666665544221 1100000 00
Q ss_pred cCCCCCChhhhccCCcchh-hccCC--CcEEEEecC------CCCCCChHHHHHHHHHHHHcCCCeeEEEcCC--CCCCC
Q 008274 482 MGLPSEDPVGYEYSSVMHH-VHKMK--GKLLLVHGM------IDENVHFRHTARLINALVAARKPYEILIFPD--ERHMP 550 (571)
Q Consensus 482 ~g~~~~~~~~~~~~s~~~~-~~~~~--~p~lli~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~ 550 (571)
-| |......|...- .. -.++. ..+|-|.|. .|..||...+..+...++......+-.++.| +.|+-
T Consensus 161 ~g-p~~~~~~y~~l~--~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~ 237 (255)
T PF06028_consen 161 NG-PKSMTPMYQDLL--KNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQ 237 (255)
T ss_dssp T--BSS--HHHHHHH--HTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCG
T ss_pred cC-CcccCHHHHHHH--HHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCcccc
Confidence 12 322223332211 11 12332 479999998 8999999999988887777667777778876 58975
Q ss_pred CCCCcHHHHHHHHHHHH
Q 008274 551 RRHRDRIYMEERIWEFI 567 (571)
Q Consensus 551 ~~~~~~~~~~~~i~~fl 567 (571)
.. +...+.+.|.+||
T Consensus 238 Lh--eN~~V~~~I~~FL 252 (255)
T PF06028_consen 238 LH--ENPQVDKLIIQFL 252 (255)
T ss_dssp GG--CCHHHHHHHHHHH
T ss_pred CC--CCHHHHHHHHHHh
Confidence 33 3446678888887
No 184
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.34 E-value=0.00022 Score=69.33 Aligned_cols=182 Identities=9% Similarity=0.030 Sum_probs=98.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+.+++.... +. .......+.|+|||+.++...... ..++.+|.++++..........
T Consensus 96 ~l~~~d~~~~~~~~~-~~--------~~~~~~~~~~~~dg~~l~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~----- 158 (300)
T TIGR03866 96 LVTVIDIETRKVLAE-IP--------VGVEPEGMAVSPDGKIVVNTSETT---NMAHFIDTKTYEIVDNVLVDQR----- 158 (300)
T ss_pred eEEEEECCCCeEEeE-ee--------CCCCcceEEECCCCCEEEEEecCC---CeEEEEeCCCCeEEEEEEcCCC-----
Confidence 578889987654321 11 112234589999999877665432 2366678888765332111100
Q ss_pred cCCcccCCCCCccCCCe-EEEEE-ecCCccEEEEEeCCCcee-eceeec-------CeEEEEEEEEeecCcEEEEEEcCC
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWAS-EKTGFRHLYLHDINGTCL-GPITEG-------DWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s-~~~g~~~l~~~~~~~~~~-~~lT~~-------~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
+ ....+++++ .++.+ ..+| .|+++++.+++. +.++.. ......+ .++++|+.+|+.....
T Consensus 159 -----~--~~~~~s~dg~~l~~~~~~~~--~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~s~dg~~~~~~~~~~ 228 (300)
T TIGR03866 159 -----P--RFAEFTADGKELWVSSEIGG--TVSVIDVATRKVIKKITFEIPGVHPEAVQPVGI-KLTKDGKTAFVALGPA 228 (300)
T ss_pred -----c--cEEEECCCCCEEEEEcCCCC--EEEEEEcCcceeeeeeeecccccccccCCccce-EECCCCCEEEEEcCCC
Confidence 0 001234444 44433 3344 577788776643 334321 1111223 4899999887765433
Q ss_pred CCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 231 GPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 231 ~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+ .+..+++. .+. ....+..+.......++|+|++++.... .-..+.++++.+++.++.+
T Consensus 229 ~----~i~v~d~~-~~~----~~~~~~~~~~~~~~~~~~~g~~l~~~~~---~~~~i~v~d~~~~~~~~~~ 287 (300)
T TIGR03866 229 N----RVAVVDAK-TYE----VLDYLLVGQRVWQLAFTPDEKYLLTTNG---VSNDVSVIDVAALKVIKSI 287 (300)
T ss_pred C----eEEEEECC-CCc----EEEEEEeCCCcceEEECCCCCEEEEEcC---CCCeEEEEECCCCcEEEEE
Confidence 2 35566762 221 2223333334456689999998754322 1237999998877765555
No 185
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.32 E-value=7.9e-05 Score=76.34 Aligned_cols=209 Identities=16% Similarity=0.175 Sum_probs=121.6
Q ss_pred CCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc-Cc------cEE
Q 008274 63 EAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS-QT------KLK 135 (571)
Q Consensus 63 ~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~-~~------~~~ 135 (571)
++...+.|...-..+....|+++|+++|+...-.+. .. ....+.|++||+.+++..... +. ..+
T Consensus 133 pdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~--------~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 133 PDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIE--------NP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp TTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEE--------EE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred CCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccc--------cc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 444555555544455668899999999976543321 11 122389999999776665333 34 678
Q ss_pred EEEEECCCCce--EEEEEeecCC--eeeccCCcccCCCCCccCCCe-EEEEE-ecCCc-cEEEEEeCCCc-----eeece
Q 008274 136 VLKFDIKTGQR--KVILVEELDS--WVNLHDCFTPLDKGVTKYSGG-FIWAS-EKTGF-RHLYLHDINGT-----CLGPI 203 (571)
Q Consensus 136 i~~~d~~~g~~--~~l~~~~~~~--w~~~~~~~~~~~~~~~~~~d~-~~~~s-~~~g~-~~l~~~~~~~~-----~~~~l 203 (571)
||+..+.++.. +.|.++.... +... ..+.|+ ++++. ..... ..+|++++..+ +.+.|
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~-----------~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l 272 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSV-----------SRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLL 272 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEE-----------EE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEE-----------EecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEE
Confidence 99999998864 4666654432 2221 223443 65554 33334 89999998774 56777
Q ss_pred eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCC-eEecCCCceEEEEECCCCCEEEEEeeCCC
Q 008274 204 TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAP-VKLTNGKGKHVAVLDHNMRNFVDFHDSLD 282 (571)
Q Consensus 204 T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~-~~lt~~~g~~~~~~s~~g~~~v~~~s~~~ 282 (571)
....-..... +...|+.+|+.++.+.+ ...|+++++. ........ ..+...++.....++..++++++.....
T Consensus 273 ~~~~~~~~~~--v~~~~~~~yi~Tn~~a~-~~~l~~~~l~--~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~- 346 (414)
T PF02897_consen 273 SPREDGVEYY--VDHHGDRLYILTNDDAP-NGRLVAVDLA--DPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYREN- 346 (414)
T ss_dssp EESSSS-EEE--EEEETTEEEEEE-TT-T-T-EEEEEETT--STSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEET-
T ss_pred eCCCCceEEE--EEccCCEEEEeeCCCCC-CcEEEEeccc--ccccccceeEEcCCCCceeEEEEEEECCEEEEEEEEC-
Confidence 6543222222 33348889999997665 6899999983 32110012 3344444444446666677888777654
Q ss_pred CCCEEEEEEcCCCce
Q 008274 283 SPPRILLCSLQDGSL 297 (571)
Q Consensus 283 ~p~~l~~~~~~~~~~ 297 (571)
.-+.|.++++..+..
T Consensus 347 ~~~~l~v~~~~~~~~ 361 (414)
T PF02897_consen 347 GSSRLRVYDLDDGKE 361 (414)
T ss_dssp TEEEEEEEETT-TEE
T ss_pred CccEEEEEECCCCcE
Confidence 455999999852443
No 186
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.31 E-value=6e-05 Score=63.86 Aligned_cols=117 Identities=15% Similarity=0.046 Sum_probs=77.2
Q ss_pred CCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEE
Q 008274 432 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLV 511 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli 511 (571)
.+.+.|++||.|...++.++.+....++++++++|..-- .+.........+++.. ...+.-|.+++
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~-------------~~~~~~~~~~tf~~~p-~~~lpfps~vv 123 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS-------------RPEIRPKHLMTFDPIP-REPLPFPSVVV 123 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcc-------------ccccchhhccccCCCc-cccCCCceeEE
Confidence 345999999999999999998776688999999886321 1111111112222222 23344589999
Q ss_pred ecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC--CCCCcHHHHHHHHHHHH
Q 008274 512 HGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP--RRHRDRIYMEERIWEFI 567 (571)
Q Consensus 512 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl 567 (571)
+..+|..++++.++.+++++- ..++....+||.- +......+.+..+.+|+
T Consensus 124 aSrnDp~~~~~~a~~~a~~wg-----s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~ 176 (181)
T COG3545 124 ASRNDPYVSYEHAEDLANAWG-----SALVDVGEGGHINAESGFGPWPEGYALLAQLL 176 (181)
T ss_pred EecCCCCCCHHHHHHHHHhcc-----HhheecccccccchhhcCCCcHHHHHHHHHHh
Confidence 999999999999999999873 3566778888853 12223334444444444
No 187
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.28 E-value=0.00021 Score=64.37 Aligned_cols=146 Identities=9% Similarity=0.038 Sum_probs=83.3
Q ss_pred EEEEEccCCeEEEEEEecc--C------ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEE
Q 008274 112 ARVNWMHGNILTAQVLNRS--Q------TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWA 181 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~--~------~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~ 181 (571)
..+.|+|+|+.|++...+. . ....||.++..+.....+.-...+.-.+. +|+|++ |+++
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~-----------~WsP~g~~favi 77 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDV-----------AWSPNGNEFAVI 77 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEE-----------EECcCCCEEEEE
Confidence 4578999999666554421 1 25689999998877666543222111110 344544 6555
Q ss_pred EecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 182 SEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
... ....+-+++..+.....+.... ...+ .|||+|++|++.+-.+-.+...+ .+. ... +.........
T Consensus 78 ~g~-~~~~v~lyd~~~~~i~~~~~~~--~n~i-~wsP~G~~l~~~g~~n~~G~l~~--wd~--~~~----~~i~~~~~~~ 145 (194)
T PF08662_consen 78 YGS-MPAKVTLYDVKGKKIFSFGTQP--RNTI-SWSPDGRFLVLAGFGNLNGDLEF--WDV--RKK----KKISTFEHSD 145 (194)
T ss_pred Ecc-CCcccEEEcCcccEeEeecCCC--ceEE-EECCCCCEEEEEEccCCCcEEEE--EEC--CCC----EEeeccccCc
Confidence 422 1236667777655555444332 2333 59999999999876543333444 454 111 1111112234
Q ss_pred eEEEEECCCCCEEEEEeeC
Q 008274 262 KHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~ 280 (571)
...+.|||||++++...+.
T Consensus 146 ~t~~~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 146 ATDVEWSPDGRYLATATTS 164 (194)
T ss_pred EEEEEEcCCCCEEEEEEec
Confidence 5566999999999987665
No 188
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.20 E-value=2.2e-05 Score=78.42 Aligned_cols=167 Identities=17% Similarity=0.124 Sum_probs=102.1
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCC--cEEEEECCCC-CCCChhhhHHHHhccCCCCCchhHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG--ILVWKLDNRG-TARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~rG-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l 424 (571)
-.|++++.||.+.. .-..+|...| .+.|.-.| ..|..+|++- .|+.+- ... .+-++.+.++.
T Consensus 175 ~spl~i~aps~p~a-p~tSd~~~~w---qs~lsl~gevvev~tfdl~n~igG~nI--~h~---------ae~~vSf~r~k 239 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLA-PKTSDRMWSW---QSRLSLKGEVVEVPTFDLNNPIGGANI--KHA---------AEYSVSFDRYK 239 (784)
T ss_pred CCceEEeccCCCCC-CccchHHHhH---HHHHhhhceeeeeccccccCCCCCcch--HHH---------HHHHHHHhhhh
Confidence 35899999998822 1122332222 23333333 4566778773 222110 000 23344555543
Q ss_pred HHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCe-eEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhh
Q 008274 425 IKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDV-FQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHV 501 (571)
Q Consensus 425 ~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~ 501 (571)
+.+ .......|.|+|+|||+.++++......+. +.|+|++.=..+ ..- | + + ...-..+
T Consensus 240 vlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~-----~vd-----g-p----r----girDE~L 300 (784)
T KOG3253|consen 240 VLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD-----TVD-----G-P----R----GIRDEAL 300 (784)
T ss_pred hhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc-----CCC-----c-c----c----CCcchhh
Confidence 332 344667899999999988888777665544 455555421110 000 0 0 0 1111346
Q ss_pred ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 502 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 502 ~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
..++.|+|++.|.+|..++++..+.+.++++ ..++++++.+++|.+.
T Consensus 301 ldmk~PVLFV~Gsnd~mcspn~ME~vreKMq---A~~elhVI~~adhsma 347 (784)
T KOG3253|consen 301 LDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ---AEVELHVIGGADHSMA 347 (784)
T ss_pred HhcCCceEEEecCCcccCCHHHHHHHHHHhh---ccceEEEecCCCcccc
Confidence 6788999999999999999999999999885 4578999999999983
No 189
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.19 E-value=0.00024 Score=69.44 Aligned_cols=134 Identities=13% Similarity=0.042 Sum_probs=95.0
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-cCccCCcccccchhhhhhcCCCC---------------CCh--
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS-GAPVTSWDGYDTFYTEKYMGLPS---------------EDP-- 489 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~---------------~~~-- 489 (571)
..++.++.+|.|.|==|..+..+++ ...|++|++- +.++.++.......-+.|.|... ..+
T Consensus 167 ~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f 245 (367)
T PF10142_consen 167 FGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEF 245 (367)
T ss_pred cCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHH
Confidence 4567889999999999999988888 5567777665 33444432111111111110111 011
Q ss_pred -hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 490 -VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 490 -~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
......+|+.+.++++.|-|++.|..|+...+..+.-++..|. .+..++.+|+++|+... ..+.+.+..|+.
T Consensus 246 ~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~---G~K~lr~vPN~~H~~~~----~~~~~~l~~f~~ 318 (367)
T PF10142_consen 246 DKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP---GEKYLRYVPNAGHSLIG----SDVVQSLRAFYN 318 (367)
T ss_pred HHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC---CCeeEEeCCCCCcccch----HHHHHHHHHHHH
Confidence 2335568999999999999999999999999999999999883 46788999999999844 566777888876
Q ss_pred H
Q 008274 569 R 569 (571)
Q Consensus 569 ~ 569 (571)
.
T Consensus 319 ~ 319 (367)
T PF10142_consen 319 R 319 (367)
T ss_pred H
Confidence 5
No 190
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.15 E-value=4.7e-05 Score=70.79 Aligned_cols=228 Identities=9% Similarity=0.082 Sum_probs=117.8
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.++++-| .+++.++.... +++|++|-.|.-+.... ..|..-+...........|.++-+|.||+......+.
T Consensus 3 ~v~t~~G-~v~V~v~G~~~-----~~kp~ilT~HDvGlNh~--scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p 74 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPK-----GNKPAILTYHDVGLNHK--SCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLP 74 (283)
T ss_dssp EEEETTE-EEEEEEESS-------TTS-EEEEE--TT--HH--HHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----
T ss_pred eeccCce-EEEEEEEecCC-----CCCceEEEeccccccch--HHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccc
Confidence 3455445 57777775433 36799999998433221 1132222222223335689999999999865433222
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh-----
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY----- 477 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----- 477 (571)
.. +.-..++++.+.+..+.+.. .-+.+.-+|--+||++-+.+|..+|+++-++|++.+...-.++..+.
T Consensus 75 ~~----y~yPsmd~LAe~l~~Vl~~f--~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~ 148 (283)
T PF03096_consen 75 EG----YQYPSMDQLAEMLPEVLDHF--GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLS 148 (283)
T ss_dssp TT---------HHHHHCTHHHHHHHH--T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH
T ss_pred cc----ccccCHHHHHHHHHHHHHhC--CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHh
Confidence 11 11112344444444444432 33568999999999999999999999999999988865421111110
Q ss_pred -----------------hhhhcCCCC--CCh---hhhc-----cCC----------------cchhhccCCCcEEEEecC
Q 008274 478 -----------------TEKYMGLPS--EDP---VGYE-----YSS----------------VMHHVHKMKGKLLLVHGM 514 (571)
Q Consensus 478 -----------------~~~~~g~~~--~~~---~~~~-----~~s----------------~~~~~~~~~~p~lli~G~ 514 (571)
..+++|... .+. +.|. ..+ .........+|+|++.|+
T Consensus 149 ~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~ 228 (283)
T PF03096_consen 149 SWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGD 228 (283)
T ss_dssp -------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEET
T ss_pred cccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEec
Confidence 001111000 010 0110 011 111233446899999998
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 515 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 515 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.-+. ...+..+..+|. ..+.+++..+++|=.. ..+.+..+.+.+.=|++.
T Consensus 229 ~Sp~--~~~vv~~ns~Ld--p~~ttllkv~dcGglV-~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 229 NSPH--VDDVVEMNSKLD--PTKTTLLKVADCGGLV-LEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp TSTT--HHHHHHHHHHS---CCCEEEEEETT-TT-H-HHH-HHHHHHHHHHHHHH
T ss_pred CCcc--hhhHHHHHhhcC--cccceEEEecccCCcc-cccCcHHHHHHHHHHHcc
Confidence 7664 457788888874 3688999999997765 345667777777777764
No 191
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.15 E-value=4.2e-05 Score=73.92 Aligned_cols=165 Identities=15% Similarity=0.145 Sum_probs=100.8
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+....+|.++|..|..++.++-...-. ..++.+...+++.++++.+.+.. -.++|-++|+|.||.++..+++
T Consensus 129 ~s~V~~l~~~g~~vfvIsw~nPd~~~~------~~~~edYi~e~l~~aid~v~~it--g~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 129 KSLVRWLLEQGLDVFVISWRNPDASLA------AKNLEDYILEGLSEAIDTVKDIT--GQKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred ccHHHHHHHcCCceEEEeccCchHhhh------hccHHHHHHHHHHHHHHHHHHHh--CccccceeeEecchHHHHHHHH
Confidence 345889999999999999885432211 11211112355667777776653 2367999999999999999988
Q ss_pred cCCCe-eEEEEEcCccCCcccc----------------------------------------c---chhhhhhc-CC-CC
Q 008274 453 RFPDV-FQCAVSGAPVTSWDGY----------------------------------------D---TFYTEKYM-GL-PS 486 (571)
Q Consensus 453 ~~~~~-~~~~v~~~~~~~~~~~----------------------------------------~---~~~~~~~~-g~-~~ 486 (571)
.++.+ ++.+.......|+... + ..|.+.|+ |. |-
T Consensus 201 ~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl 280 (445)
T COG3243 201 LMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPL 280 (445)
T ss_pred hhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCC
Confidence 87776 7766655443332100 0 00111111 10 00
Q ss_pred -CCh--------------------hhhccC----------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 487 -EDP--------------------VGYEYS----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 487 -~~~--------------------~~~~~~----------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
.+. ..|.++ .-.-.+.+|+||++.+.|++|.++|........+.+ +
T Consensus 281 ~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~---~ 357 (445)
T COG3243 281 PFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLL---G 357 (445)
T ss_pred chhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhc---C
Confidence 000 011111 111236678999999999999999998888777766 5
Q ss_pred CCeeEEEcCCCCCC
Q 008274 536 KPYEILIFPDERHM 549 (571)
Q Consensus 536 ~~~~~~~~~~~~H~ 549 (571)
.++++++. ++||-
T Consensus 358 g~~~f~l~-~sGHI 370 (445)
T COG3243 358 GEVTFVLS-RSGHI 370 (445)
T ss_pred CceEEEEe-cCceE
Confidence 57888776 45895
No 192
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.08 E-value=9.2e-06 Score=67.63 Aligned_cols=118 Identities=19% Similarity=0.247 Sum_probs=80.6
Q ss_pred HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcc
Q 008274 419 TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVM 498 (571)
Q Consensus 419 ~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~ 498 (571)
+.-+|++++.. +.+..+-|.||||+.++.+..++|++|..+|+.+++.+.+.+ +|...++...| ++|.
T Consensus 89 AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardf--------fg~yyddDv~y--nsP~ 156 (227)
T COG4947 89 AYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDF--------FGGYYDDDVYY--NSPS 156 (227)
T ss_pred HHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHh--------ccccccCceee--cChh
Confidence 34556666532 345778999999999999999999999999999999876422 22222222222 4444
Q ss_pred hhh---------ccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 499 HHV---------HKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 499 ~~~---------~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..+ ++++ ..+.+..|..|+..+ +...+.+.|..+.++..+.+..+..|..
T Consensus 157 dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L~--~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 157 DYLPGLADPFRLERLRRIDMVFCIGDEDPFLD--NNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred hhccCCcChHHHHHHhhccEEEEecCcccccc--chHHHHHHhccccccHHHHHhccccccc
Confidence 443 3333 367778888887765 5667777787777888777776666654
No 193
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.07 E-value=0.0022 Score=61.04 Aligned_cols=203 Identities=15% Similarity=0.085 Sum_probs=110.1
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||+.|+....+ ..+.+|++.+++.....
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~~------------------------------------g~i~i~~~~~~~~~~~~------ 47 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSGD------------------------------------GTIKVWDLETGELLRTL------ 47 (289)
T ss_pred CCEEEEEEcCCCCEEEEeecC------------------------------------cEEEEEEeeCCCcEEEE------
Confidence 345678999999999875432 14677888876533221
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~ 181 (571)
......+..+.|+|+++.++...... .|++.|..+++........... + ..+ .+.++ .+++.
T Consensus 48 --~~~~~~i~~~~~~~~~~~l~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~-i------~~~----~~~~~~~~~~~ 110 (289)
T cd00200 48 --KGHTGPVRDVAASADGTYLASGSSDK----TIRLWDLETGECVRTLTGHTSY-V------SSV----AFSPDGRILSS 110 (289)
T ss_pred --ecCCcceeEEEECCCCCEEEEEcCCC----eEEEEEcCcccceEEEeccCCc-E------EEE----EEcCCCCEEEE
Confidence 11234456789999998777765433 4888888876433222211110 0 000 12333 35555
Q ss_pred EecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC
Q 008274 182 SEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~ 260 (571)
+..+| .|+++++..++ ...+......+..+ .|+++++.++... .++ .++.+++. .+. ....+....
T Consensus 111 ~~~~~--~i~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~-~~~----~i~i~d~~-~~~----~~~~~~~~~ 177 (289)
T cd00200 111 SSRDK--TIKVWDVETGKCLTTLRGHTDWVNSV-AFSPDGTFVASSS-QDG----TIKLWDLR-TGK----CVATLTGHT 177 (289)
T ss_pred ecCCC--eEEEEECCCcEEEEEeccCCCcEEEE-EEcCcCCEEEEEc-CCC----cEEEEEcc-ccc----cceeEecCc
Confidence 54344 56677766443 33333223234444 4888876555443 232 34444552 121 222333222
Q ss_pred -ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 261 -GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 261 -g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
......++++++.+++... -..+.++++..++....+
T Consensus 178 ~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 178 GEVNSVAFSPDGEKLLSSSS----DGTIKLWDLSTGKCLGTL 215 (289)
T ss_pred cccceEEECCCcCEEEEecC----CCcEEEEECCCCceecch
Confidence 3345689999987766543 246888887665544433
No 194
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.04 E-value=0.0021 Score=66.04 Aligned_cols=217 Identities=9% Similarity=0.063 Sum_probs=114.8
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~ 160 (571)
+-+||..+|-= .+++ ++....+..+.|+.+|+.++-.+-.+. +-..|+..+.. |..+..+...+.-
T Consensus 374 VKvWn~~SgfC-~vTF-------teHts~Vt~v~f~~~g~~llssSLDGt----VRAwDlkRYrNfRTft~P~p~Qfsc- 440 (893)
T KOG0291|consen 374 VKVWNTQSGFC-FVTF-------TEHTSGVTAVQFTARGNVLLSSSLDGT----VRAWDLKRYRNFRTFTSPEPIQFSC- 440 (893)
T ss_pred EEEEeccCceE-EEEe-------ccCCCceEEEEEEecCCEEEEeecCCe----EEeeeecccceeeeecCCCceeeeE-
Confidence 45666665532 2333 234556788899999986665543331 44455555443 2222211111111
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+ +-++.+ +++....+ ..+|++++..+|+...+-+| +..+... +++|+|+.|+-.+.+.- ..+|
T Consensus 441 ------v----avD~sGelV~AG~~d-~F~IfvWS~qTGqllDiLsGHEgPVs~l-~f~~~~~~LaS~SWDkT---VRiW 505 (893)
T KOG0291|consen 441 ------V----AVDPSGELVCAGAQD-SFEIFVWSVQTGQLLDILSGHEGPVSGL-SFSPDGSLLASGSWDKT---VRIW 505 (893)
T ss_pred ------E----EEcCCCCEEEeeccc-eEEEEEEEeecCeeeehhcCCCCcceee-EEccccCeEEeccccce---EEEE
Confidence 1 113334 55443333 46799999888886655444 5455555 49999996666555443 4444
Q ss_pred EEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCC
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEP 318 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 318 (571)
.+=- ... ..+.|......-.++|+|||+.++...... +|-.++...+.+.-.+... ..+...+. .
T Consensus 506 ~if~--s~~----~vEtl~i~sdvl~vsfrPdG~elaVaTldg----qItf~d~~~~~q~~~Idgr----kD~~~gR~-~ 570 (893)
T KOG0291|consen 506 DIFS--SSG----TVETLEIRSDVLAVSFRPDGKELAVATLDG----QITFFDIKEAVQVGSIDGR----KDLSGGRK-E 570 (893)
T ss_pred Eeec--cCc----eeeeEeeccceeEEEEcCCCCeEEEEEecc----eEEEEEhhhceeeccccch----hhcccccc-c
Confidence 4322 211 334444333456679999999998876553 6777776555543333221 12222222 2
Q ss_pred CeEEEEEc-CCCcEEEEEEEcCCC
Q 008274 319 PDIVQIQA-NDGTVLYGALYKPDE 341 (571)
Q Consensus 319 ~~~~~~~~-~dg~~l~~~~~~P~~ 341 (571)
.+.++-+. ..+.......|.+++
T Consensus 571 ~D~~ta~~sa~~K~Ftti~ySaDG 594 (893)
T KOG0291|consen 571 TDRITAENSAKGKTFTTICYSADG 594 (893)
T ss_pred cceeehhhcccCCceEEEEEcCCC
Confidence 23333332 245666666776654
No 195
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.03 E-value=0.0025 Score=65.90 Aligned_cols=183 Identities=11% Similarity=0.082 Sum_probs=98.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+........++ .+...++....|+|+|+.++..+... .|.+.|+.+|++....+.....-..
T Consensus 226 tiriwd~~~~~~~~~~l-------~gH~~~v~~~~f~p~g~~i~Sgs~D~----tvriWd~~~~~~~~~l~~hs~~is~- 293 (456)
T KOG0266|consen 226 TLRIWDLKDDGRNLKTL-------KGHSTYVTSVAFSPDGNLLVSGSDDG----TVRIWDVRTGECVRKLKGHSDGISG- 293 (456)
T ss_pred eEEEeeccCCCeEEEEe-------cCCCCceEEEEecCCCCEEEEecCCC----cEEEEeccCCeEEEeeeccCCceEE-
Confidence 57889994332222233 24567889999999996666554433 3888899998877655543321111
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee---eceeecCeE-EEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL---GPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~---~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
+ ..++++ ++..+..+| .|.++|+.++.. +.+...... ......++|++++|+..+.... .
T Consensus 294 ------~----~f~~d~~~l~s~s~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~---~ 358 (456)
T KOG0266|consen 294 ------L----AFSPDGNLLVSASYDG--TIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRT---L 358 (456)
T ss_pred ------E----EECCCCCEEEEcCCCc--cEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCe---E
Confidence 1 123444 555554444 466777777763 344443322 2233459999988777654332 4
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCC-C---ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNG-K---GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~-~---g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.+|.+.- +. -+...+.- . ....+..++++++++-.... ..++..+..++..+..+
T Consensus 359 ~~w~l~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d----~~v~~~~~~s~~~~~~l 417 (456)
T KOG0266|consen 359 KLWDLRS---GK----SVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSED----GSVYVWDSSSGGILQRL 417 (456)
T ss_pred EEEEccC---Cc----ceeeecccCCcceeEecccccCCCCeEEEEeCC----ceEEEEeCCccchhhhh
Confidence 4444331 11 11122211 1 12233446677665443322 36777777665544333
No 196
>COG3150 Predicted esterase [General function prediction only]
Probab=98.03 E-value=8.4e-05 Score=62.05 Aligned_cols=134 Identities=16% Similarity=0.193 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCC--hhhhc
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED--PVGYE 493 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~ 493 (571)
...+.++.++.+.. | ..++|+|.|.|||.+.+++.++. +++++....+...+.+ ..++|.+... -+.|.
T Consensus 44 ~a~~ele~~i~~~~-~-~~p~ivGssLGGY~At~l~~~~G--irav~~NPav~P~e~l-----~gylg~~en~ytg~~y~ 114 (191)
T COG3150 44 QALKELEKAVQELG-D-ESPLIVGSSLGGYYATWLGFLCG--IRAVVFNPAVRPYELL-----TGYLGRPENPYTGQEYV 114 (191)
T ss_pred HHHHHHHHHHHHcC-C-CCceEEeecchHHHHHHHHHHhC--ChhhhcCCCcCchhhh-----hhhcCCCCCCCCcceEE
Confidence 34444555554421 2 34999999999999999998763 3444433222222111 2233332210 01221
Q ss_pred cCC----c--chhhccCCC-cE-EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHH
Q 008274 494 YSS----V--MHHVHKMKG-KL-LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWE 565 (571)
Q Consensus 494 ~~s----~--~~~~~~~~~-p~-lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 565 (571)
-.+ - ...+..++. .. .++.-+.|++....++.+.+... ..++..+++|.|. ......++|..
T Consensus 115 le~~hI~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~-------~~~V~dgg~H~F~---~f~~~l~~i~a 184 (191)
T COG3150 115 LESRHIATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPC-------YEIVWDGGDHKFK---GFSRHLQRIKA 184 (191)
T ss_pred eehhhHHHHHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhhh-------hheeecCCCcccc---chHHhHHHHHH
Confidence 000 0 011223332 34 44455559998888777766654 4457888999984 35666788888
Q ss_pred HHH
Q 008274 566 FIE 568 (571)
Q Consensus 566 fl~ 568 (571)
|..
T Consensus 185 F~g 187 (191)
T COG3150 185 FKG 187 (191)
T ss_pred Hhc
Confidence 864
No 197
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.03 E-value=0.0055 Score=58.28 Aligned_cols=180 Identities=16% Similarity=0.195 Sum_probs=93.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+.+++.... + ......+..+.|+|+++.++..... ..|..+|+.+++.......... .+.
T Consensus 74 ~i~i~~~~~~~~~~~-~-------~~~~~~i~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~-~i~- 139 (289)
T cd00200 74 TIRLWDLETGECVRT-L-------TGHTSYVSSVAFSPDGRILSSSSRD----KTIKVWDVETGKCLTTLRGHTD-WVN- 139 (289)
T ss_pred eEEEEEcCcccceEE-E-------eccCCcEEEEEEcCCCCEEEEecCC----CeEEEEECCCcEEEEEeccCCC-cEE-
Confidence 478888887543222 1 1234467789999998766555422 2488888887665433321111 010
Q ss_pred cCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.+ .++++ .+++....+| .|++++...++. ..+......+..+ .|+++++.+++.+. ++ .+.
T Consensus 140 -----~~----~~~~~~~~l~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~-~~----~i~ 202 (289)
T cd00200 140 -----SV----AFSPDGTFVASSSQDG--TIKLWDLRTGKCVATLTGHTGEVNSV-AFSPDGEKLLSSSS-DG----TIK 202 (289)
T ss_pred -----EE----EEcCcCCEEEEEcCCC--cEEEEEccccccceeEecCccccceE-EECCCcCEEEEecC-CC----cEE
Confidence 00 12333 3555554344 466677654433 3333333234444 48999988888776 32 344
Q ss_pred EEEeCCCCCCCCCCCeEe-cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 239 CAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~l-t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
.+++. .+. ....+ ..........+++++..++ ..+ .-..++++++.+++....
T Consensus 203 i~d~~-~~~----~~~~~~~~~~~i~~~~~~~~~~~~~-~~~---~~~~i~i~~~~~~~~~~~ 256 (289)
T cd00200 203 LWDLS-TGK----CLGTLRGHENGVNSVAFSPDGYLLA-SGS---EDGTIRVWDLRTGECVQT 256 (289)
T ss_pred EEECC-CCc----eecchhhcCCceEEEEEcCCCcEEE-EEc---CCCcEEEEEcCCceeEEE
Confidence 44541 121 22223 1222344568888865444 333 223678888755554333
No 198
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.02 E-value=0.013 Score=55.09 Aligned_cols=208 Identities=18% Similarity=0.209 Sum_probs=114.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEc-cCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws-pDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|+.++.++++...+... . ....... +||++++. .... +.++|.++|+.+.+........
T Consensus 23 ~i~~~~~~~~~~~~~~~~--------~---~~G~~~~~~~g~l~v~-~~~~-----~~~~d~~~g~~~~~~~~~~~~~-- 83 (246)
T PF08450_consen 23 RIYRVDPDTGEVEVIDLP--------G---PNGMAFDRPDGRLYVA-DSGG-----IAVVDPDTGKVTVLADLPDGGV-- 83 (246)
T ss_dssp EEEEEETTTTEEEEEESS--------S---EEEEEEECTTSEEEEE-ETTC-----EEEEETTTTEEEEEEEEETTCS--
T ss_pred EEEEEECCCCeEEEEecC--------C---CceEEEEccCCEEEEE-EcCc-----eEEEecCCCcEEEEeeccCCCc--
Confidence 578899999887766552 1 3334555 78764433 2222 5666999999888877532100
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCC----c--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTG----F--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g----~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
+...+... ..++++ +++...... . ..||+++.+ ++.+.+..+-.....+ .|++|++.||++-+..+
T Consensus 84 --~~~~~ND~--~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi-~~s~dg~~lyv~ds~~~- 156 (246)
T PF08450_consen 84 --PFNRPNDV--AVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGI-AFSPDGKTLYVADSFNG- 156 (246)
T ss_dssp --CTEEEEEE--EE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEE-EEETTSSEEEEEETTTT-
T ss_pred --ccCCCceE--EEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccce-EECCcchheeecccccc-
Confidence 01111111 124555 555433321 2 579999988 5555554332122344 49999999999876554
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEe---cCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCCh
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKL---TNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~l---t~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~ 308 (571)
.|++++++.++. .....+.+ ....+ -....+..+|+..+..+ ....+++++. +|+.+..+.-.
T Consensus 157 ---~i~~~~~~~~~~-~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~----~~~~I~~~~p-~G~~~~~i~~p---- 223 (246)
T PF08450_consen 157 ---RIWRFDLDADGG-ELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW----GGGRIVVFDP-DGKLLREIELP---- 223 (246)
T ss_dssp ---EEEEEEEETTTC-CEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE----TTTEEEEEET-TSCEEEEEE-S----
T ss_pred ---eeEEEecccccc-ceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc----CCCEEEEECC-CccEEEEEcCC----
Confidence 488888732232 01112222 22222 34568888997655544 2348999887 47655444221
Q ss_pred hhhccCCCCCCeEEEEEcCCCcEEEE
Q 008274 309 PRIKRLQLEPPDIVQIQANDGTVLYG 334 (571)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~dg~~l~~ 334 (571)
...+..+.|-.++...|..
T Consensus 224 -------~~~~t~~~fgg~~~~~L~v 242 (246)
T PF08450_consen 224 -------VPRPTNCAFGGPDGKTLYV 242 (246)
T ss_dssp -------SSSEEEEEEESTTSSEEEE
T ss_pred -------CCCEEEEEEECCCCCEEEE
Confidence 1245666666556555544
No 199
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=97.99 E-value=0.0022 Score=58.16 Aligned_cols=247 Identities=14% Similarity=0.106 Sum_probs=126.7
Q ss_pred eeecccceeeeecc-CCCceEEECC--CCCeEEEEEE-eCC--CCCeEEEeecCCCCCCCCCcccccCCCCCC----CCc
Q 008274 9 QTHGLAEYIAQEEM-DRKTGYWWSL--DSKFIAFTQV-DSS--EIPRFRIMHQGKSSVGSEAQEDHAYPFAGA----SNV 78 (571)
Q Consensus 9 ~~~g~~~~~~~~~~-~~~~~~~wSP--Dg~~iay~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~----~~~ 78 (571)
..+|-+|||.++-+ .....+-.|. |-+-|.+-.. ++. +++...+ .+- +.......-.++|. ..-
T Consensus 10 tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~---~GH---sH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 10 TLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRL---TGH---SHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred eecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeee---ecc---ceEecceEEccCCceEEeccc
Confidence 56899999999887 3455555544 4333433222 211 1111111 010 01222222222222 111
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.-.|.+||+++|+.++.-. +...-+..+++|||++.|+.-+ |+. -|-+.|+.++....+.++.+..|+
T Consensus 84 D~~lrlWDl~~g~~t~~f~--------GH~~dVlsva~s~dn~qivSGS-rDk---Tiklwnt~g~ck~t~~~~~~~~WV 151 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFV--------GHTKDVLSVAFSTDNRQIVSGS-RDK---TIKLWNTLGVCKYTIHEDSHREWV 151 (315)
T ss_pred cceEEEEEecCCcEEEEEE--------ecCCceEEEEecCCCceeecCC-Ccc---eeeeeeecccEEEEEecCCCcCcE
Confidence 1358899999998766533 3455677899999999877643 332 388889998776666665546787
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeece-eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPI-TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~l-T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.. .+|.|.. .+-++.....++. +-+.|+.+-+.+.- ....-.+.-. .+||||..... +..+ -.+
T Consensus 152 sc-vrfsP~~------~~p~Ivs~s~Dkt--vKvWnl~~~~l~~~~~gh~~~v~t~-~vSpDGslcas-Ggkd----g~~ 216 (315)
T KOG0279|consen 152 SC-VRFSPNE------SNPIIVSASWDKT--VKVWNLRNCQLRTTFIGHSGYVNTV-TVSPDGSLCAS-GGKD----GEA 216 (315)
T ss_pred EE-EEEcCCC------CCcEEEEccCCce--EEEEccCCcchhhccccccccEEEE-EECCCCCEEec-CCCC----ceE
Confidence 64 2344421 1224433333333 33445555432211 1122233333 59999975433 3333 456
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
+.++++ .+. ...-+....-.++..|||+.-++..... +.|-+.++.+++.+
T Consensus 217 ~LwdL~-~~k----~lysl~a~~~v~sl~fspnrywL~~at~-----~sIkIwdl~~~~~v 267 (315)
T KOG0279|consen 217 MLWDLN-EGK----NLYSLEAFDIVNSLCFSPNRYWLCAATA-----TSIKIWDLESKAVV 267 (315)
T ss_pred EEEEcc-CCc----eeEeccCCCeEeeEEecCCceeEeeccC-----CceEEEeccchhhh
Confidence 666773 222 2222322333456689998644433221 23666777555543
No 200
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.99 E-value=1.8e-05 Score=84.18 Aligned_cols=130 Identities=18% Similarity=0.178 Sum_probs=84.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCChhhhHHHHhccCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARRGLKFEASIKHNCG 410 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~~~~~~~~~~~~~~ 410 (571)
|..-+|.|...... + +||+|++|||.........+ ........+..+..+|++++||-. -|......... .|
T Consensus 97 LylNV~tp~~~~~~-~-~pV~V~iHGG~~~~gs~~~~--~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~---~g 169 (545)
T KOG1516|consen 97 LYLNVYTPQGCSES-K-LPVMVYIHGGGFQFGSASSF--EIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA---PG 169 (545)
T ss_pred ceEEEeccCCCccC-C-CCEEEEEeCCceeeccccch--hhcCchhccccCCEEEEEecccceeceeeecCCCCC---CC
Confidence 77788888764211 2 89999999986543311111 111224455677899999999932 11100000111 24
Q ss_pred CCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccC
Q 008274 411 RIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 468 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~ 468 (571)
...+.|+..|++|+.+. ..-|+++|.|+|||+||..+..+.... ..+|+.+|..++..
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 44578999999999886 335999999999999999998776531 25788877776643
No 201
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.96 E-value=0.0078 Score=59.86 Aligned_cols=171 Identities=11% Similarity=0.065 Sum_probs=81.2
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCe-EEEEE-ecC
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGG-FIWAS-EKT 185 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s-~~~ 185 (571)
...-.+.++|||++++.. +...+...+|.+|..+++......-. ..+--+.+- .+++|+ ++|+. +..
T Consensus 144 ~h~H~v~~~pdg~~v~v~-dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~---------~f~pdg~~~Yv~~e~s 213 (345)
T PF10282_consen 144 PHPHQVVFSPDGRFVYVP-DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL---------AFSPDGKYAYVVNELS 213 (345)
T ss_dssp TCEEEEEE-TTSSEEEEE-ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE---------EE-TTSSEEEEEETTT
T ss_pred ccceeEEECCCCCEEEEE-ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE---------EEcCCcCEEEEecCCC
Confidence 344568999999976544 55556656666666666544322111 111001001 223443 44443 334
Q ss_pred CccEEEEEeCCCceeeceee-----cCe----EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 186 GFRHLYLHDINGTCLGPITE-----GDW----MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~-----~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
+.-.+|.++..++..+.+.. ..+ ....+ .++|||++||.+....+ ...+|.++. .+|. +.....+
T Consensus 214 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i-~ispdg~~lyvsnr~~~--sI~vf~~d~-~~g~--l~~~~~~ 287 (345)
T PF10282_consen 214 NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEI-AISPDGRFLYVSNRGSN--SISVFDLDP-ATGT--LTLVQTV 287 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEE-EE-TTSSEEEEEECTTT--EEEEEEECT-TTTT--EEEEEEE
T ss_pred CcEEEEeecccCCceeEEEEeeeccccccccCCceeE-EEecCCCEEEEEeccCC--EEEEEEEec-CCCc--eEEEEEE
Confidence 44444555533544333211 111 23344 48999999988765544 355565543 1232 1122233
Q ss_pred cC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 257 TN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 257 t~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.. +..-..+.++|+|++++......+. -.++.++..+|.
T Consensus 288 ~~~G~~Pr~~~~s~~g~~l~Va~~~s~~-v~vf~~d~~tG~ 327 (345)
T PF10282_consen 288 PTGGKFPRHFAFSPDGRYLYVANQDSNT-VSVFDIDPDTGK 327 (345)
T ss_dssp EESSSSEEEEEE-TTSSEEEEEETTTTE-EEEEEEETTTTE
T ss_pred eCCCCCccEEEEeCCCCEEEEEecCCCe-EEEEEEeCCCCc
Confidence 32 2223556899999988776544432 244445554554
No 202
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.95 E-value=0.00096 Score=64.63 Aligned_cols=219 Identities=15% Similarity=0.127 Sum_probs=128.0
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
++.-+.+.+.. ++.+.-+ +|+|... .++..+||++||...+. .|......+.+.|.+.|++++++-.+.--
T Consensus 59 lp~~e~~~L~~-~~~~fla-L~~~~~~---~~~~G~vIilp~~g~~~----d~p~~i~~LR~~L~~~GW~Tlsit~P~~~ 129 (310)
T PF12048_consen 59 LPADEVQWLQA-GEERFLA-LWRPANS---AKPQGAVIILPDWGEHP----DWPGLIAPLRRELPDHGWATLSITLPDPA 129 (310)
T ss_pred CCHhhcEEeec-CCEEEEE-EEecccC---CCCceEEEEecCCCCCC----CcHhHHHHHHHHhhhcCceEEEecCCCcc
Confidence 44455566665 4444544 5667543 25678999999965443 45555667788899999999998877511
Q ss_pred CC-hhhh-------HH---------------------HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHH
Q 008274 396 RR-GLKF-------EA---------------------SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYL 446 (571)
Q Consensus 396 ~~-~~~~-------~~---------------------~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 446 (571)
.. ...+ .. ............-+.+++.++.+++ ..+|+|+||+.|+++
T Consensus 130 ~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~ 206 (310)
T PF12048_consen 130 PPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGW 206 (310)
T ss_pred cccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHH
Confidence 00 0000 00 0000000001223445555555553 345999999999999
Q ss_pred HHHHHhcCCC-eeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 447 SAITLARFPD-VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 447 a~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
++.++...+. .+.+.|.+++-..-.. . .......+.+++.|+|=|++.. .... ....
T Consensus 207 ~~~~la~~~~~~~daLV~I~a~~p~~~--------------~------n~~l~~~la~l~iPvLDi~~~~-~~~~-~~~a 264 (310)
T PF12048_consen 207 AARYLAEKPPPMPDALVLINAYWPQPD--------------R------NPALAEQLAQLKIPVLDIYSAD-NPAS-QQTA 264 (310)
T ss_pred HHHHHhcCCCcccCeEEEEeCCCCcch--------------h------hhhHHHHhhccCCCEEEEecCC-ChHH-HHHH
Confidence 9999998754 4678888776432100 0 1122345677889999999876 3222 2222
Q ss_pred HHHHHHHHcC--CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 526 RLINALVAAR--KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 526 ~~~~~l~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
...+.+.++. ...+-+.+++..|.... ....+.++|..||+++
T Consensus 265 ~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~--~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 265 KQRKQAAKRNKKPDYRQIQLPGLPDNPSG--WQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHhccCCCceeEecCCCCCChhh--HHHHHHHHHHHHHHhh
Confidence 3323332222 45666677777776532 2333889999999875
No 203
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.93 E-value=0.0012 Score=60.85 Aligned_cols=230 Identities=12% Similarity=0.063 Sum_probs=133.4
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccc-hhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTV-DMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
.++..+.+.-|. +++.++.-.. .+.|++|-.|+-+.... ..|..-+ .+.++.+.++ |.++-+|.+|+-.-
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~-----~~kpaiiTyhDlglN~~--scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~g 92 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPK-----GNKPAIITYHDLGLNHK--SCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDG 92 (326)
T ss_pred ceeeeecccccc-EEEEEecCCC-----CCCceEEEecccccchH--hHhHHhhcCHhHHHHHhh-eEEEecCCCccccC
Confidence 466777776654 7777775332 25688999998443322 1122111 2335667777 99999999997433
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC------cc
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS------WD 471 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~------~~ 471 (571)
...+ ...+.-..++++.+.|-.+++.. .-+.|.-+|--+|+++-.++|..||+++-+.|++.+... |.
T Consensus 93 Ap~~----p~~y~yPsmd~LAd~l~~VL~~f--~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~ 166 (326)
T KOG2931|consen 93 APSF----PEGYPYPSMDDLADMLPEVLDHF--GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWA 166 (326)
T ss_pred CccC----CCCCCCCCHHHHHHHHHHHHHhc--CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHH
Confidence 2222 12212223556666665555543 345788899999999999999999999999999876543 21
Q ss_pred cc--c--------------chhhhhhcCCCC---------------------CChhhh----ccCCcch-----hhccCC
Q 008274 472 GY--D--------------TFYTEKYMGLPS---------------------EDPVGY----EYSSVMH-----HVHKMK 505 (571)
Q Consensus 472 ~~--~--------------~~~~~~~~g~~~---------------------~~~~~~----~~~s~~~-----~~~~~~ 505 (571)
.. . .....+++|.-. .+...| .....+. ....++
T Consensus 167 ~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlk 246 (326)
T KOG2931|consen 167 YNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLK 246 (326)
T ss_pred HHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCcccc
Confidence 00 0 000111111110 111111 1111111 011456
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+|+|++.|++-+-+ +....+..+|. .....+....++|-.. ..+..-.+.+.+.=|++
T Consensus 247 c~vllvvGd~Sp~~--~~vv~~n~~Ld--p~~ttllk~~d~g~l~-~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 247 CPVLLVVGDNSPHV--SAVVECNSKLD--PTYTTLLKMADCGGLV-QEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred ccEEEEecCCCchh--hhhhhhhcccC--cccceEEEEcccCCcc-cccCchHHHHHHHHHHc
Confidence 99999999877654 45566666663 2577888888988765 33345555566655554
No 204
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.91 E-value=6.6e-05 Score=70.00 Aligned_cols=97 Identities=18% Similarity=0.103 Sum_probs=60.1
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHH-HHHHHHHHcCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQL-TGAEWLIKQGL 429 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~l~~~~~ 429 (571)
.|+++|++.++.. .|..+++.+...++.|+.++++|.+...... ..++++. ..++.+....
T Consensus 2 ~lf~~p~~gG~~~-------~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~----------~si~~la~~y~~~I~~~~- 63 (229)
T PF00975_consen 2 PLFCFPPAGGSAS-------SYRPLARALPDDVIGVYGIEYPGRGDDEPPP----------DSIEELASRYAEAIRARQ- 63 (229)
T ss_dssp EEEEESSTTCSGG-------GGHHHHHHHTTTEEEEEEECSTTSCTTSHEE----------SSHHHHHHHHHHHHHHHT-
T ss_pred eEEEEcCCccCHH-------HHHHHHHhCCCCeEEEEEEecCCCCCCCCCC----------CCHHHHHHHHHHHhhhhC-
Confidence 5788999877643 4566677777657999999999875222110 0122222 2233333322
Q ss_pred CcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAP 466 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~ 466 (571)
...++.|+|||+||.+|..+|.+ ....+..+++.++
T Consensus 64 -~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 64 -PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp -SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred -CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 23489999999999999988754 3344666666653
No 205
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=97.90 E-value=0.0041 Score=56.25 Aligned_cols=188 Identities=11% Similarity=0.084 Sum_probs=95.9
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+.++|||.|++||-.+++.+- .++.-..++-.-++.
T Consensus 63 sVRsvAwsp~g~~La~aSFD~t~------------------------------------~Iw~k~~~efecv~~------ 100 (312)
T KOG0645|consen 63 SVRSVAWSPHGRYLASASFDATV------------------------------------VIWKKEDGEFECVAT------ 100 (312)
T ss_pred eeeeeeecCCCcEEEEeeccceE------------------------------------EEeecCCCceeEEee------
Confidence 36789999999999998877443 111111222221211
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE---EEeecCCeeeccCCcccCCCCCccCCC-eEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI---LVEELDSWVNLHDCFTPLDKGVTKYSG-GFI 179 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l---~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~ 179 (571)
|.+.+.-+-.++||++|.+|+.++ |+ ..-+|+.+| +.++-..+ ..++.+ . +...|.|. .++
T Consensus 101 lEGHEnEVK~Vaws~sG~~LATCS-RD-KSVWiWe~d-eddEfec~aVL~~HtqD----V--------K~V~WHPt~dlL 165 (312)
T KOG0645|consen 101 LEGHENEVKCVAWSASGNYLATCS-RD-KSVWIWEID-EDDEFECIAVLQEHTQD----V--------KHVIWHPTEDLL 165 (312)
T ss_pred eeccccceeEEEEcCCCCEEEEee-CC-CeEEEEEec-CCCcEEEEeeecccccc----c--------cEEEEcCCccee
Confidence 123455667799999999999885 44 345788777 45554332 222211 0 00022332 255
Q ss_pred EEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE--EEeCCCCCCCCCCCe
Q 008274 180 WASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC--AKLYPDWNHTLEAPV 254 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~--~~l~~~g~~~~~~~~ 254 (571)
|...-+.--.+|+-.. +.. ...|....-.+-.. .|++.|..|.-.+++.. ..||+ .++ .+. .-+
T Consensus 166 ~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~-~F~~~G~rl~s~sdD~t---v~Iw~~~~~~--~~~----~sr 234 (312)
T KOG0645|consen 166 FSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSL-AFDNIGSRLVSCSDDGT---VSIWRLYTDL--SGM----HSR 234 (312)
T ss_pred EEeccCCeEEEEeecC-CCCeeEEEEecCccceEEEE-EecCCCceEEEecCCcc---eEeeeeccCc--chh----ccc
Confidence 5443333344454432 221 23343333344444 38888877776655433 66666 444 221 112
Q ss_pred EecCCC--ceEEEEECCCCCEEEEEee
Q 008274 255 KLTNGK--GKHVAVLDHNMRNFVDFHD 279 (571)
Q Consensus 255 ~lt~~~--g~~~~~~s~~g~~~v~~~s 279 (571)
.+..-+ ....++...|++..+|.-+
T Consensus 235 ~~Y~v~W~~~~IaS~ggD~~i~lf~~s 261 (312)
T KOG0645|consen 235 ALYDVPWDNGVIASGGGDDAIRLFKES 261 (312)
T ss_pred ceEeeeecccceEeccCCCEEEEEEec
Confidence 222111 1123455667766666555
No 206
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.86 E-value=0.0025 Score=60.33 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=67.5
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY 106 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~ 106 (571)
-+.|||||++||=-+.+ ..|.+||.++|+..--++ ..
T Consensus 162 cvawsPDgk~iASG~~d------------------------------------g~I~lwdpktg~~~g~~l-------~g 198 (480)
T KOG0271|consen 162 CVAWSPDGKKIASGSKD------------------------------------GSIRLWDPKTGQQIGRAL-------RG 198 (480)
T ss_pred EEEECCCcchhhccccC------------------------------------CeEEEecCCCCCcccccc-------cC
Confidence 47799999999864433 136778888876542222 34
Q ss_pred CCceeEEEEEcc-----CCeEEEEEEeccCccEEEEEEECCCCceEEEEE-eecC-CeeeccCCcccCCCCCccCCCeEE
Q 008274 107 DEEYLARVNWMH-----GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELD-SWVNLHDCFTPLDKGVTKYSGGFI 179 (571)
Q Consensus 107 ~~~~~~~~~wsp-----Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~-~~~~-~w~~~~~~~~~~~~~~~~~~d~~~ 179 (571)
....+...+|-| ..++++..+..+ .+.+-|+..|.+..+.. ++.. ..+ .|.+++++
T Consensus 199 H~K~It~Lawep~hl~p~~r~las~skDg----~vrIWd~~~~~~~~~lsgHT~~VTCv-------------rwGG~gli 261 (480)
T KOG0271|consen 199 HKKWITALAWEPLHLVPPCRRLASSSKDG----SVRIWDTKLGTCVRTLSGHTASVTCV-------------RWGGEGLI 261 (480)
T ss_pred cccceeEEeecccccCCCccceecccCCC----CEEEEEccCceEEEEeccCccceEEE-------------EEcCCceE
Confidence 456677788855 455555554433 37777888887654432 2211 111 23456677
Q ss_pred EEEecCCccEEEEEeCCCceeecee
Q 008274 180 WASEKTGFRHLYLHDINGTCLGPIT 204 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~~~~~~lT 204 (571)
+.+..++.-.+|... +|.-.+.|.
T Consensus 262 ySgS~DrtIkvw~a~-dG~~~r~lk 285 (480)
T KOG0271|consen 262 YSGSQDRTIKVWRAL-DGKLCRELK 285 (480)
T ss_pred EecCCCceEEEEEcc-chhHHHhhc
Confidence 776666655555543 233334444
No 207
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.86 E-value=0.00032 Score=66.09 Aligned_cols=135 Identities=14% Similarity=0.174 Sum_probs=77.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE--EEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK--VILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~--~l~~~~~~~w~ 158 (571)
.+.+||+.+..+.. +. ....+.+..++|||||+.|+.-+..+ .|...|+++|+.. .|..+. .|+
T Consensus 138 TvR~WD~~TeTp~~-t~-------KgH~~WVlcvawsPDgk~iASG~~dg----~I~lwdpktg~~~g~~l~gH~--K~I 203 (480)
T KOG0271|consen 138 TVRLWDLDTETPLF-TC-------KGHKNWVLCVAWSPDGKKIASGSKDG----SIRLWDPKTGQQIGRALRGHK--KWI 203 (480)
T ss_pred eEEeeccCCCCcce-ee-------cCCccEEEEEEECCCcchhhccccCC----eEEEecCCCCCcccccccCcc--cce
Confidence 45778988754321 11 23456778899999999888765544 3999999998753 232222 343
Q ss_pred eccCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCceeec-eeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGTCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~~~-lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.. -.|.|.. ..+. +.+..+.++|--.|| |...++... |+.....+.-+ .| .|..+.|+++.+.. ..
T Consensus 204 t~-Lawep~h----l~p~~r~las~skDg~vrIW--d~~~~~~~~~lsgHT~~VTCv-rw--GG~gliySgS~Drt--Ik 271 (480)
T KOG0271|consen 204 TA-LAWEPLH----LVPPCRRLASSSKDGSVRIW--DTKLGTCVRTLSGHTASVTCV-RW--GGEGLIYSGSQDRT--IK 271 (480)
T ss_pred eE-Eeecccc----cCCCccceecccCCCCEEEE--EccCceEEEEeccCccceEEE-EE--cCCceEEecCCCce--EE
Confidence 21 1233332 1222 355556667754444 444444433 33334444433 47 45558888887763 67
Q ss_pred EEEEE
Q 008274 237 LYCAK 241 (571)
Q Consensus 237 l~~~~ 241 (571)
+|+..
T Consensus 272 vw~a~ 276 (480)
T KOG0271|consen 272 VWRAL 276 (480)
T ss_pred EEEcc
Confidence 77643
No 208
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=97.85 E-value=0.0075 Score=59.60 Aligned_cols=174 Identities=13% Similarity=0.061 Sum_probs=95.5
Q ss_pred eeeeeeecccceeeeecc----CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceE
Q 008274 5 FHVLQTHGLAEYIAQEEM----DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 80 (571)
Q Consensus 5 ~~~~~~~g~~~~~~~~~~----~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 80 (571)
|.|++|.|-|- =|.-.+ .-...+++||||+++|=+..| -
T Consensus 170 n~v~ffeGPPF-KFk~s~r~HskFV~~VRysPDG~~Fat~gsD------------------------------------g 212 (603)
T KOG0318|consen 170 NTVAFFEGPPF-KFKSSFREHSKFVNCVRYSPDGSRFATAGSD------------------------------------G 212 (603)
T ss_pred CeEEEeeCCCe-eeeecccccccceeeEEECCCCCeEEEecCC------------------------------------c
Confidence 67888888774 232222 224678899999998765443 1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~~ 159 (571)
.+++||=++|+..-. +++. ....+.++.++||||+++++.++.... +-+-|+.+.++.+ +.-... ++
T Consensus 213 ki~iyDGktge~vg~-l~~~----~aHkGsIfalsWsPDs~~~~T~SaDkt----~KIWdVs~~slv~t~~~~~~---v~ 280 (603)
T KOG0318|consen 213 KIYIYDGKTGEKVGE-LEDS----DAHKGSIFALSWSPDSTQFLTVSADKT----IKIWDVSTNSLVSTWPMGST---VE 280 (603)
T ss_pred cEEEEcCCCccEEEE-ecCC----CCccccEEEEEECCCCceEEEecCCce----EEEEEeeccceEEEeecCCc---hh
Confidence 468888887765422 2110 235678899999999998888765442 4444666665322 211111 11
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+ ..-.+ -|..|.++-+|-. |+ |-.++++.....++-.| ...+... ..++|+++||-.+. ++ +|-
T Consensus 281 d--qqvG~----lWqkd~lItVSl~-G~--in~ln~~d~~~~~~i~GHnK~ITaL-tv~~d~~~i~Sgsy-DG----~I~ 345 (603)
T KOG0318|consen 281 D--QQVGC----LWQKDHLITVSLS-GT--INYLNPSDPSVLKVISGHNKSITAL-TVSPDGKTIYSGSY-DG----HIN 345 (603)
T ss_pred c--eEEEE----EEeCCeEEEEEcC-cE--EEEecccCCChhheecccccceeEE-EEcCCCCEEEeecc-Cc----eEE
Confidence 1 00111 2444555555433 43 33444444443333333 4455555 48999976665443 33 455
Q ss_pred EEEe
Q 008274 239 CAKL 242 (571)
Q Consensus 239 ~~~l 242 (571)
..+.
T Consensus 346 ~W~~ 349 (603)
T KOG0318|consen 346 SWDS 349 (603)
T ss_pred EEec
Confidence 5554
No 209
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.85 E-value=3e-05 Score=75.51 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=64.0
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhH-HHHh--CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQ-YLRS--KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW 423 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~-~l~~--~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 423 (571)
...|++|++||...... ...|.. .+.. ++.. .++.|+++|+...... .+..+...- ......+...|..
T Consensus 69 ~~~pt~iiiHGw~~~~~-~~~~~~---~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~--~~vg~~la~~l~~ 140 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGS-SESWIQ---DMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANT--RLVGRQLAKFLSF 140 (331)
T ss_dssp TTSEEEEEE--TT-TT--TTTHHH---HHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCccc-chhHHH---HHHHHHHhhccCCceEEEEcchhhccc--cccchhhhH--HHHHHHHHHHHHH
Confidence 46799999999655531 223322 2233 3444 5899999999642111 111111100 0012345566777
Q ss_pred HHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCccCC
Q 008274 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAPVTS 469 (571)
Q Consensus 424 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~~~~ 469 (571)
|.+...++.++|.|+|||+||++|..+...... ++..+....|...
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 775555789999999999999999988877665 6777888777643
No 210
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.84 E-value=0.0013 Score=69.32 Aligned_cols=165 Identities=10% Similarity=0.027 Sum_probs=95.5
Q ss_pred ceeEEEEEccCCeEEEEEEecc----CccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EE---
Q 008274 109 EYLARVNWMHGNILTAQVLNRS----QTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FI--- 179 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~----~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~--- 179 (571)
.....+..||||+.++++..+. .....||+++. +|+.+.++..... ..+ +|++|+ +.
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~~~----t~P---------sWspDG~~lw~v~ 415 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGHSL----TRP---------SWSLDADAVWVVV 415 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCCCC----CCc---------eECCCCCceEEEe
Confidence 4678899999999888886421 23558999997 4555777653211 111 334442 33
Q ss_pred ------EEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCC
Q 008274 180 ------WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAP 253 (571)
Q Consensus 180 ------~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~ 253 (571)
+++.+.+..+||+++.++++.++ .....+.++. ||+||++|+|+.. + ...+..+.-..+|..++..+
T Consensus 416 dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~-wSpDG~RiA~i~~--g--~v~Va~Vvr~~~G~~~l~~~ 488 (591)
T PRK13616 416 DGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQ-LSRDGVRAAMIIG--G--KVYLAVVEQTEDGQYALTNP 488 (591)
T ss_pred cCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEE-ECCCCCEEEEEEC--C--EEEEEEEEeCCCCceeeccc
Confidence 33334455688988888877664 2222356664 9999999999983 2 23333333222332223344
Q ss_pred eEecCCCc--eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 254 VKLTNGKG--KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 254 ~~lt~~~g--~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
+.|+..-+ .....|..+++ |+...++... .++.+++ +|...
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~-L~V~~~~~~~--~v~~v~v-DG~~~ 531 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDS-LVVGRSDPEH--PVWYVNL-DGSNS 531 (591)
T ss_pred EEeecccCCccccceEecCCE-EEEEecCCCC--ceEEEec-CCccc
Confidence 55554322 24457888887 4444444333 3677777 45543
No 211
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.81 E-value=0.0011 Score=62.30 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=57.7
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
..+|-|.+.++.|.+++.+..+++++..++.|.+++...++++.|.-....+.+...+.+.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3479999999999999999999999999999999999999999998777788888888888773
No 212
>PTZ00421 coronin; Provisional
Probab=97.81 E-value=0.014 Score=60.53 Aligned_cols=165 Identities=10% Similarity=0.081 Sum_probs=83.2
Q ss_pred CCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEe
Q 008274 106 YDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~ 183 (571)
.....+..+.|+|++. .++... .+. .|.+.|+++++.......... .+. .+ .|++++ +++.+.
T Consensus 123 gH~~~V~~l~f~P~~~~iLaSgs-~Dg---tVrIWDl~tg~~~~~l~~h~~-~V~------sl----a~spdG~lLatgs 187 (493)
T PTZ00421 123 GHTKKVGIVSFHPSAMNVLASAG-ADM---VVNVWDVERGKAVEVIKCHSD-QIT------SL----EWNLDGSLLCTTS 187 (493)
T ss_pred CCCCcEEEEEeCcCCCCEEEEEe-CCC---EEEEEECCCCeEEEEEcCCCC-ceE------EE----EEECCCCEEEEec
Confidence 3455678899999875 555443 332 378889998875433221111 110 11 344555 555555
Q ss_pred cCCccEEEEEeCCCcee-eceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec---C
Q 008274 184 KTGFRHLYLHDINGTCL-GPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT---N 258 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~-~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt---~ 258 (571)
.+| .|.++|+.+++. ..+.... ...... .|.++++.|+..+.... ....+..+++.. .. .+.... .
T Consensus 188 ~Dg--~IrIwD~rsg~~v~tl~~H~~~~~~~~-~w~~~~~~ivt~G~s~s-~Dr~VklWDlr~-~~----~p~~~~~~d~ 258 (493)
T PTZ00421 188 KDK--KLNIIDPRDGTIVSSVEAHASAKSQRC-LWAKRKDLIITLGCSKS-QQRQIMLWDTRK-MA----SPYSTVDLDQ 258 (493)
T ss_pred CCC--EEEEEECCCCcEEEEEecCCCCcceEE-EEcCCCCeEEEEecCCC-CCCeEEEEeCCC-CC----CceeEeccCC
Confidence 555 355667655432 2332221 112223 38888877766553221 124555566621 11 222221 1
Q ss_pred CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 259 ~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
..+...+.++++++.++....+. ..|.++++.+++.
T Consensus 259 ~~~~~~~~~d~d~~~L~lggkgD---g~Iriwdl~~~~~ 294 (493)
T PTZ00421 259 SSALFIPFFDEDTNLLYIGSKGE---GNIRCFELMNERL 294 (493)
T ss_pred CCceEEEEEcCCCCEEEEEEeCC---CeEEEEEeeCCce
Confidence 12333457889988655443222 2677777765553
No 213
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.79 E-value=0.00014 Score=67.02 Aligned_cols=102 Identities=16% Similarity=0.128 Sum_probs=58.8
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHH--------HhCCcEEEEECCCCCC--CChhhhHHHHhccCCCCCchhHHH
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYL--------RSKGILVWKLDNRGTA--RRGLKFEASIKHNCGRIDAEDQLT 419 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l--------~~~G~~v~~~d~rG~~--~~~~~~~~~~~~~~~~~~~~D~~~ 419 (571)
..|||+||..++.. . ++.++..+ ....+.++++|+.... ..|..... ..+-+.+
T Consensus 5 ~pVlFIhG~~Gs~~---q----~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~---------q~~~~~~ 68 (225)
T PF07819_consen 5 IPVLFIHGNAGSYK---Q----VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQR---------QAEFLAE 68 (225)
T ss_pred CEEEEECcCCCCHh---H----HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHH---------HHHHHHH
Confidence 45678999766533 1 11122222 1235889999987532 11211110 0223444
Q ss_pred HHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCcc
Q 008274 420 GAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPV 467 (571)
Q Consensus 420 ~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~ 467 (571)
+++.+.+.. ....++|.|+||||||.++-.++...+ +.++.+|..+..
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 555554432 346789999999999999988876543 467777776543
No 214
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.79 E-value=0.0065 Score=60.10 Aligned_cols=59 Identities=8% Similarity=0.046 Sum_probs=31.2
Q ss_pred EEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEe
Q 008274 215 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFH 278 (571)
Q Consensus 215 ~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~ 278 (571)
.++|||+++|.. ++.. ....++.++- ++. .......+..+..-....++|||++++...
T Consensus 234 ~~~pdg~~lyv~-~~~~-~~I~v~~i~~--~~~-~~~~~~~~~~~~~p~~~~~~~dg~~l~va~ 292 (330)
T PRK11028 234 HITPDGRHLYAC-DRTA-SLISVFSVSE--DGS-VLSFEGHQPTETQPRGFNIDHSGKYLIAAG 292 (330)
T ss_pred EECCCCCEEEEe-cCCC-CeEEEEEEeC--CCC-eEEEeEEEeccccCCceEECCCCCEEEEEE
Confidence 488999988886 3332 1355555543 331 000111111122223458999999877654
No 215
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.77 E-value=0.0045 Score=55.72 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=35.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
.+.+||+..++...... ..+....++|||||..+++..+.+ .|-.+|+.+-+
T Consensus 88 ~ir~wd~r~~k~~~~i~---------~~~eni~i~wsp~g~~~~~~~kdD----~it~id~r~~~ 139 (313)
T KOG1407|consen 88 TIRIWDIRSGKCTARIE---------TKGENINITWSPDGEYIAVGNKDD----RITFIDARTYK 139 (313)
T ss_pred eEEEEEeccCcEEEEee---------ccCcceEEEEcCCCCEEEEecCcc----cEEEEEecccc
Confidence 46889999887664432 223334579999999888875444 37777877654
No 216
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.77 E-value=0.00031 Score=63.04 Aligned_cols=210 Identities=16% Similarity=0.133 Sum_probs=110.5
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCC-----cEEEEECCCCCCCChhhh----HHHHh-------ccCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-----ILVWKLDNRGTARRGLKF----EASIK-------HNCG 410 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~rG~~~~~~~~----~~~~~-------~~~~ 410 (571)
..+|+| |+||..+... ..+.++..|...+ -.++.+|--|+-...+.. ...+. ++.+
T Consensus 44 ~~iPTI-fIhGsgG~as-------S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~ 115 (288)
T COG4814 44 VAIPTI-FIHGSGGTAS-------SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASG 115 (288)
T ss_pred cccceE-EEecCCCChh-------HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCch
Confidence 367875 5899777654 2233455555444 567777777642211111 00000 1111
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCccc--ccchhhhhhcC
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDG--YDTFYTEKYMG 483 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~--~~~~~~~~~~g 483 (571)
.....-+..++.+|.++.. -.++-++||||||.....++..+.+ .+...|+.++..+-.. .+....+-...
T Consensus 116 ~~~s~wlk~~msyL~~~Y~--i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~ 193 (288)
T COG4814 116 LDQSKWLKKAMSYLQKHYN--IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKD 193 (288)
T ss_pred hhHHHHHHHHHHHHHHhcC--CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeecc
Confidence 1113456778888888864 4579999999999999988876432 2355555554433100 00000000000
Q ss_pred CCCCChhhhccCCcchhhccC--CCcEEEEecCCC------CCCChHHHHHHHHHHHHcCCCeeEEEcCC--CCCCCCCC
Q 008274 484 LPSEDPVGYEYSSVMHHVHKM--KGKLLLVHGMID------ENVHFRHTARLINALVAARKPYEILIFPD--ERHMPRRH 553 (571)
Q Consensus 484 ~~~~~~~~~~~~s~~~~~~~~--~~p~lli~G~~D------~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~~~ 553 (571)
.|......|..+- ......+ ...+|+|.|+-| -.||...+......+...++...--+|++ +.|.-.
T Consensus 194 ~~~~~~t~y~~y~-~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~l-- 270 (288)
T COG4814 194 GPGLIKTPYYDYI-AKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKL-- 270 (288)
T ss_pred CccccCcHHHHHH-HhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhcc--
Confidence 1100000010000 0011222 247999999854 56777888888777766666666556665 568652
Q ss_pred CcHHHHHHHHHHHHHH
Q 008274 554 RDRIYMEERIWEFIER 569 (571)
Q Consensus 554 ~~~~~~~~~i~~fl~~ 569 (571)
++...+.+.+..||-+
T Consensus 271 hen~~v~~yv~~FLw~ 286 (288)
T COG4814 271 HENPTVAKYVKNFLWE 286 (288)
T ss_pred CCChhHHHHHHHHhhc
Confidence 3344566777777743
No 217
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.76 E-value=0.0024 Score=57.41 Aligned_cols=182 Identities=15% Similarity=0.141 Sum_probs=98.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|..||+++|-.+.+.+ +.+++++....+ ....
T Consensus 21 ~~v~Sv~wn~~g~~lasgs~dkt------------------------------------v~v~n~e~~r~~-~~~~---- 59 (313)
T KOG1407|consen 21 QKVHSVAWNCDGTKLASGSFDKT------------------------------------VSVWNLERDRFR-KELV---- 59 (313)
T ss_pred hcceEEEEcccCceeeecccCCc------------------------------------eEEEEecchhhh-hhhc----
Confidence 45567899999999987665422 244555543211 1110
Q ss_pred CCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEE
Q 008274 103 DQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
.......+.+..|.|-.. .++.++... .|.+.|...+++..-++........ .|+|++ .+.
T Consensus 60 -~~gh~~svdql~w~~~~~d~~atas~dk----~ir~wd~r~~k~~~~i~~~~eni~i------------~wsp~g~~~~ 122 (313)
T KOG1407|consen 60 -YRGHTDSVDQLCWDPKHPDLFATASGDK----TIRIWDIRSGKCTARIETKGENINI------------TWSPDGEYIA 122 (313)
T ss_pred -ccCCCcchhhheeCCCCCcceEEecCCc----eEEEEEeccCcEEEEeeccCcceEE------------EEcCCCCEEE
Confidence 022233566788998766 444444333 3888899988876544433222111 244444 444
Q ss_pred EEecCCccEEEEEeCCCceeeceee--cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC
Q 008274 181 ASEKTGFRHLYLHDINGTCLGPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~~~~~lT~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~ 258 (571)
..+++. .|-.+|...- +.+-. -.+++..+. |+ ..+-++|..+..|- .+|...+- -. .+.-|..
T Consensus 123 ~~~kdD--~it~id~r~~--~~~~~~~~~~e~ne~~-w~-~~nd~Fflt~GlG~--v~ILsyps--Lk-----pv~si~A 187 (313)
T KOG1407|consen 123 VGNKDD--RITFIDARTY--KIVNEEQFKFEVNEIS-WN-NSNDLFFLTNGLGC--VEILSYPS--LK-----PVQSIKA 187 (313)
T ss_pred EecCcc--cEEEEEeccc--ceeehhcccceeeeee-ec-CCCCEEEEecCCce--EEEEeccc--cc-----ccccccc
Confidence 444433 2444443322 22222 244566665 66 44568888887664 67766542 11 1112222
Q ss_pred -CCceEEEEECCCCCEEEEE
Q 008274 259 -GKGKHVAVLDHNMRNFVDF 277 (571)
Q Consensus 259 -~~g~~~~~~s~~g~~~v~~ 277 (571)
..+.....|+|+|++++.-
T Consensus 188 H~snCicI~f~p~GryfA~G 207 (313)
T KOG1407|consen 188 HPSNCICIEFDPDGRYFATG 207 (313)
T ss_pred CCcceEEEEECCCCceEeec
Confidence 2234556899999998764
No 218
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.73 E-value=0.00065 Score=59.55 Aligned_cols=90 Identities=22% Similarity=0.194 Sum_probs=66.3
Q ss_pred chhhhHHHHhCCcEEEEECCCCC-CCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 372 VDMRAQYLRSKGILVWKLDNRGT-ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 372 ~~~~~~~l~~~G~~v~~~d~rG~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
..++..+|.+.+|..+.+-.|.+ .|+|. ..+ +.+.+|+..+++++....+ ...|+++|||.|..=.+.+
T Consensus 55 ~~~L~~~lde~~wslVq~q~~Ssy~G~Gt---~sl-----k~D~edl~~l~~Hi~~~~f--St~vVL~GhSTGcQdi~yY 124 (299)
T KOG4840|consen 55 TTMLNRYLDENSWSLVQPQLRSSYNGYGT---FSL-----KDDVEDLKCLLEHIQLCGF--STDVVLVGHSTGCQDIMYY 124 (299)
T ss_pred HHHHHHHHhhccceeeeeecccccccccc---ccc-----cccHHHHHHHHHHhhccCc--ccceEEEecCccchHHHHH
Confidence 34567788899999999988854 22331 111 2347888888887765542 3489999999999999988
Q ss_pred Hhc--CCCeeEEEEEcCccCCcc
Q 008274 451 LAR--FPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 451 ~~~--~~~~~~~~v~~~~~~~~~ 471 (571)
+.+ .+..+.++|+.+|+.|-+
T Consensus 125 lTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 125 LTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred HHhccchHHHHHHHHhCccchhh
Confidence 843 356688999999999865
No 219
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.68 E-value=0.0001 Score=66.87 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=48.7
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcE---EEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL---VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
|| |++||...... ..|..+++.|.++||. |+.++|-...... . ....... ....+++.++++.+++
T Consensus 3 PV-VlVHG~~~~~~------~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~-~-~~~~~~~--~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 3 PV-VLVHGTGGNAY------SNWSTLAPYLKAAGYCDSEVYALTYGSGNGSP-S-VQNAHMS--CESAKQLRAFIDAVLA 71 (219)
T ss_dssp -E-EEE--TTTTTC------GGCCHHHHHHHHTT--CCCEEEE--S-CCHHT-H-HHHHHB---HHHHHHHHHHHHHHHH
T ss_pred CE-EEECCCCcchh------hCHHHHHHHHHHcCCCcceeEeccCCCCCCCC-c-ccccccc--hhhHHHHHHHHHHHHH
Confidence 55 55899665322 3456678999999999 7999995433211 1 1111100 0113456666666655
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.- .. +|-|+|||+||.++-+++..
T Consensus 72 ~T--Ga-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 72 YT--GA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HH--T---EEEEEETCHHHHHHHHHHH
T ss_pred hh--CC-EEEEEEcCCcCHHHHHHHHH
Confidence 42 34 89999999999999888753
No 220
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=97.64 E-value=0.039 Score=50.36 Aligned_cols=170 Identities=11% Similarity=0.100 Sum_probs=90.9
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
.+..+.+..+..|+||.+.+ ..+++. .+.+-|+++|+.++........-.. ..|++ ++.-++...|
T Consensus 60 ~GHsH~v~dv~~s~dg~~al-S~swD~---~lrlWDl~~g~~t~~f~GH~~dVls--va~s~--------dn~qivSGSr 125 (315)
T KOG0279|consen 60 TGHSHFVSDVVLSSDGNFAL-SASWDG---TLRLWDLATGESTRRFVGHTKDVLS--VAFST--------DNRQIVSGSR 125 (315)
T ss_pred eccceEecceEEccCCceEE-eccccc---eEEEEEecCCcEEEEEEecCCceEE--EEecC--------CCceeecCCC
Confidence 45577899999999997544 334443 3778899999887765532221110 01111 2223333333
Q ss_pred CCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe-cCCCce
Q 008274 185 TGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKGK 262 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l-t~~~g~ 262 (571)
+- -|-+++.-+...-.++.+. .+.-..+.|+|.....++.+.-.+. ...++ ++ ++- +.+.- ....++
T Consensus 126 Dk--Tiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk-tvKvW--nl--~~~----~l~~~~~gh~~~ 194 (315)
T KOG0279|consen 126 DK--TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK-TVKVW--NL--RNC----QLRTTFIGHSGY 194 (315)
T ss_pred cc--eeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc-eEEEE--cc--CCc----chhhcccccccc
Confidence 32 2444454555444444432 3334455799986444444443321 24444 44 221 11111 112233
Q ss_pred -EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 263 -HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 263 -~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
..+.+||||...+. ...-.++++.++..++.+..+..
T Consensus 195 v~t~~vSpDGslcas----Ggkdg~~~LwdL~~~k~lysl~a 232 (315)
T KOG0279|consen 195 VNTVTVSPDGSLCAS----GGKDGEAMLWDLNEGKNLYSLEA 232 (315)
T ss_pred EEEEEECCCCCEEec----CCCCceEEEEEccCCceeEeccC
Confidence 34589999985433 45667899999988776555443
No 221
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.62 E-value=0.013 Score=58.55 Aligned_cols=170 Identities=14% Similarity=0.068 Sum_probs=84.5
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-----CeeeccCCcccCCCCCccCCCeEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-----SWVNLHDCFTPLDKGVTKYSGGFIWA 181 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-----~w~~~~~~~~~~~~~~~~~~d~~~~~ 181 (571)
...+.....|+|||++++...+..+ .|-.+|.++++...+...... ...-.++.+ +.+|.
T Consensus 170 ~g~~~~D~~~dpdgry~~va~~~sn---~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~------------g~vw~ 234 (369)
T PF02239_consen 170 VGRFPHDGGFDPDGRYFLVAANGSN---KIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGF------------GPVWA 234 (369)
T ss_dssp --TTEEEEEE-TTSSEEEEEEGGGT---EEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTT------------EEEEE
T ss_pred ccccccccccCcccceeeecccccc---eeEEEeeccceEEEEeeccccccccccccccCCCc------------ceEEe
Confidence 3456677899999997665544432 699999999876655432111 000001111 23333
Q ss_pred EecCCccEEEEEe--------CCC-ceeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCC
Q 008274 182 SEKTGFRHLYLHD--------ING-TCLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251 (571)
Q Consensus 182 s~~~g~~~l~~~~--------~~~-~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~ 251 (571)
....+..-+-.+. ... +..+.+.. +.- -+...+|++++|++...... ....+..++. ..- .
T Consensus 235 ~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g---lFi~thP~s~~vwvd~~~~~-~~~~v~viD~--~tl---~ 305 (369)
T PF02239_consen 235 TSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG---LFIKTHPDSRYVWVDTFLNP-DADTVQVIDK--KTL---K 305 (369)
T ss_dssp EEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS-----EE--TT-SEEEEE-TT-S-SHT-EEEEEC--CGT---E
T ss_pred eccccceecccccCCccccchhhcCeEEEEEECCCCc---ceeecCCCCccEEeeccCCC-CCceEEEEEC--cCc---c
Confidence 3222222111111 111 11222321 111 13346899999999854332 2578888887 221 0
Q ss_pred CCeEecCCCc--eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 252 APVKLTNGKG--KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 252 ~~~~lt~~~g--~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
....+....+ ...+.|++||+++.++.-.... .|.++|..+.+..+++.
T Consensus 306 ~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~--~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 306 VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNG--AIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TT--EEEEEETTTTEEEEEEE
T ss_pred eeEEEeccCCCcEeccEECCCCCEEEEEEecCCC--EEEEEECCCcEEEEEEE
Confidence 2234443334 5667999999988776655443 89999988887776664
No 222
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.60 E-value=0.026 Score=56.40 Aligned_cols=128 Identities=10% Similarity=0.037 Sum_probs=61.5
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCee
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~ 158 (571)
.|.++|+.+++.. .+.. .....+++.|+||++++...... + .+.++|.+|.+... |.........
T Consensus 59 ~vsviD~~~~~~v~~i~~----------G~~~~~i~~s~DG~~~~v~n~~~-~--~v~v~D~~tle~v~~I~~~~~~~~~ 125 (369)
T PF02239_consen 59 TVSVIDLATGKVVATIKV----------GGNPRGIAVSPDGKYVYVANYEP-G--TVSVIDAETLEPVKTIPTGGMPVDG 125 (369)
T ss_dssp EEEEEETTSSSEEEEEE-----------SSEEEEEEE--TTTEEEEEEEET-T--EEEEEETTT--EEEEEE--EE-TTT
T ss_pred eEEEEECCcccEEEEEec----------CCCcceEEEcCCCCEEEEEecCC-C--ceeEeccccccceeecccccccccc
Confidence 4688999988754 3332 33456689999999775553333 2 48899999988644 3221110000
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
..++...+- .+...+.|++.-.+ -.+++++|....+ .+.+..+.+- .+. .|++++++++...+
T Consensus 126 -~~~Rv~aIv--~s~~~~~fVv~lkd--~~~I~vVdy~d~~~~~~~~i~~g~~~-~D~-~~dpdgry~~va~~ 191 (369)
T PF02239_consen 126 -PESRVAAIV--ASPGRPEFVVNLKD--TGEIWVVDYSDPKNLKVTTIKVGRFP-HDG-GFDPDGRYFLVAAN 191 (369)
T ss_dssp -S---EEEEE--E-SSSSEEEEEETT--TTEEEEEETTTSSCEEEEEEE--TTE-EEE-EE-TTSSEEEEEEG
T ss_pred -cCCCceeEE--ecCCCCEEEEEEcc--CCeEEEEEeccccccceeeecccccc-ccc-ccCcccceeeeccc
Confidence 000000000 01112224443333 3478999865542 2333334432 233 49999998888654
No 223
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.60 E-value=0.00022 Score=66.12 Aligned_cols=141 Identities=14% Similarity=0.098 Sum_probs=79.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCc--EEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI--LVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+..++||+||... .|.......++.....|+ .++.+..|..+.- ..+.... ........++...+..|.
T Consensus 17 ~~~vlvfVHGyn~------~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~d~--~~a~~s~~~l~~~L~~L~ 87 (233)
T PF05990_consen 17 DKEVLVFVHGYNN------SFEDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYFYDR--ESARFSGPALARFLRDLA 87 (233)
T ss_pred CCeEEEEEeCCCC------CHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhhhhh--hhHHHHHHHHHHHHHHHH
Confidence 4579999999433 233333334555555554 7899998865532 1111111 011112344555666665
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhc----CC-----CeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLAR----FP-----DVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSS 496 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~----~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s 496 (571)
+.. ...+|.|++||||+.+.+.++.. .+ .+|..+++.+|-.+...+...+
T Consensus 88 ~~~--~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~------------------- 146 (233)
T PF05990_consen 88 RAP--GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQL------------------- 146 (233)
T ss_pred hcc--CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHH-------------------
Confidence 542 46799999999999999887654 11 2455666666655432211111
Q ss_pred cchhhccCCCcEEEEecCCCCCCC
Q 008274 497 VMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 497 ~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
..+.+...++.+.+..+|....
T Consensus 147 --~~~~~~~~~itvy~s~~D~AL~ 168 (233)
T PF05990_consen 147 --PDLGSSARRITVYYSRNDRALK 168 (233)
T ss_pred --HHHhhcCCCEEEEEcCCchHHH
Confidence 1233344688888888886443
No 224
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.59 E-value=0.00032 Score=71.99 Aligned_cols=135 Identities=15% Similarity=0.108 Sum_probs=79.0
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc-----------cchhhhHHHHhCCcEEEEECC-CCCCC
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN-----------TVDMRAQYLRSKGILVWKLDN-RGTAR 396 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-----------~~~~~~~~l~~~G~~v~~~d~-rG~~~ 396 (571)
+..+..|++..... ++..|+|++++|||+.......|.. ........+.+. ..++.+|. +|+|.
T Consensus 60 ~~~lFyw~~~s~~~---~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNG---NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCc
Confidence 56788888876542 3567999999999998653222100 000001122222 46777785 57665
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcC----------CCeeEEEEEcC
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARF----------PDVFQCAVSGA 465 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~----------~~~~~~~v~~~ 465 (571)
+-..... ....-....+|+.++++.+.++ +.....++.|+|+||||..+-.++..- .-.+++++.+.
T Consensus 136 S~~~~~~--~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 136 SYADKAD--YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred ccCCCCC--CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 4321110 0000012356777777766554 444568999999999999887666531 11367888888
Q ss_pred ccCC
Q 008274 466 PVTS 469 (571)
Q Consensus 466 ~~~~ 469 (571)
|+++
T Consensus 214 g~~d 217 (462)
T PTZ00472 214 GLTD 217 (462)
T ss_pred cccC
Confidence 8764
No 225
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.57 E-value=0.066 Score=49.77 Aligned_cols=276 Identities=11% Similarity=0.053 Sum_probs=136.7
Q ss_pred eeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEE-----------eecCCCCC-CCCCcccccCCCCCCCCceEEEEE
Q 008274 17 IAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRI-----------MHQGKSSV-GSEAQEDHAYPFAGASNVKVRLGV 84 (571)
Q Consensus 17 ~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~y~~~g~~~~~~~l~~ 84 (571)
++.|...+...+.+|+||..++-.+.++.. ..|.. ..|+-+.. +.......-+... .....|..
T Consensus 9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl-~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt---k~d~tIry 84 (311)
T KOG1446|consen 9 VFRETNGKINSLDFSDDGLLLITSSEDDSL-RLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST---KEDDTIRY 84 (311)
T ss_pred ccccCCCceeEEEecCCCCEEEEecCCCeE-EEEEcCCCceeeEeecccccccEEEEecCCceEEEccC---CCCCceEE
Confidence 344444677899999999998764433221 11111 11111100 0001111111111 11135666
Q ss_pred EECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCc
Q 008274 85 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCF 164 (571)
Q Consensus 85 ~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~ 164 (571)
.++.+.+-.+. + .+....+..+.-+|-+...+-.+... .|.+.|+...+++-+.......
T Consensus 85 Lsl~dNkylRY-F-------~GH~~~V~sL~~sP~~d~FlS~S~D~----tvrLWDlR~~~cqg~l~~~~~p-------- 144 (311)
T KOG1446|consen 85 LSLHDNKYLRY-F-------PGHKKRVNSLSVSPKDDTFLSSSLDK----TVRLWDLRVKKCQGLLNLSGRP-------- 144 (311)
T ss_pred EEeecCceEEE-c-------CCCCceEEEEEecCCCCeEEecccCC----eEEeeEecCCCCceEEecCCCc--------
Confidence 77776654443 1 23456788888999775333332222 2777788777777665533221
Q ss_pred ccCCCCCccCCCeEEEEEecCCccEEEEEeCC---Ccee--eceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 165 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDIN---GTCL--GPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 165 ~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~---~~~~--~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+. +.+|.|++|..-.++- .|-++|+. .+.. -.++.++. +...+ .+|+||+.|..+++.. .+|
T Consensus 145 --i~---AfDp~GLifA~~~~~~-~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l-~FS~dGK~iLlsT~~s-----~~~ 212 (311)
T KOG1446|consen 145 --IA---AFDPEGLIFALANGSE-LIKLYDLRSFDKGPFTTFSITDNDEAEWTDL-EFSPDGKSILLSTNAS-----FIY 212 (311)
T ss_pred --ce---eECCCCcEEEEecCCC-eEEEEEecccCCCCceeEccCCCCccceeee-EEcCCCCEEEEEeCCC-----cEE
Confidence 11 3467787665433222 45555542 2222 22332221 22333 5999999999987643 355
Q ss_pred EEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCC
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLE 317 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (571)
.++.- +|... ......+... -...++++|||++++- .+.. ..|++.++.++.++..+..... .......+
T Consensus 213 ~lDAf-~G~~~-~tfs~~~~~~~~~~~a~ftPds~Fvl~-gs~d---g~i~vw~~~tg~~v~~~~~~~~--~~~~~~~f- 283 (311)
T KOG1446|consen 213 LLDAF-DGTVK-STFSGYPNAGNLPLSATFTPDSKFVLS-GSDD---GTIHVWNLETGKKVAVLRGPNG--GPVSCVRF- 283 (311)
T ss_pred EEEcc-CCcEe-eeEeeccCCCCcceeEEECCCCcEEEE-ecCC---CcEEEEEcCCCcEeeEecCCCC--CCcccccc-
Confidence 55542 34200 0111111111 1246689999986543 3332 3688888888887665544211 11122233
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPD 340 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~ 340 (571)
.|+...+-+.+ ..|.. |.|.
T Consensus 284 nP~~~mf~sa~-s~l~f--w~p~ 303 (311)
T KOG1446|consen 284 NPRYAMFVSAS-SNLVF--WLPD 303 (311)
T ss_pred CCceeeeeecC-ceEEE--Eecc
Confidence 55666666544 33443 4554
No 226
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.56 E-value=0.003 Score=56.69 Aligned_cols=226 Identities=17% Similarity=0.112 Sum_probs=114.2
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CC--cEEEEECCCCCCCChhhhHHHH
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KG--ILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G--~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
|.+.....+.|--.++ ....|+++++.|.||...+ |..++..|.. .+ .-++.+-.-|+..-........
T Consensus 10 gl~~si~~~~~~v~~~-~~~~~li~~IpGNPG~~gF-------Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 10 GLPTSILTLKPWVTKS-GEDKPLIVWIPGNPGLLGF-------YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred CCcccceeeeeeeccC-CCCceEEEEecCCCCchhH-------HHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 3344444445533211 1467999999999997542 2233444432 22 4477776666543221111111
Q ss_pred -hccCCCCCchhHHH-HHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCccCC--------cc--
Q 008274 406 -KHNCGRIDAEDQLT-GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAPVTS--------WD-- 471 (571)
Q Consensus 406 -~~~~~~~~~~D~~~-~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~~~~--------~~-- 471 (571)
..+.....++|++. -++++.+. .....++.++|||-|++|++.++-.... .+..+++.-|-.. +.
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~-~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t 160 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEY-VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLT 160 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHh-CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEee
Confidence 11112233555554 45555543 2255799999999999999999874322 2344444444211 00
Q ss_pred -------------c-----ccchhh----hhhcC----CCCCC---hhhhccCCc-------------------chhhcc
Q 008274 472 -------------G-----YDTFYT----EKYMG----LPSED---PVGYEYSSV-------------------MHHVHK 503 (571)
Q Consensus 472 -------------~-----~~~~~~----~~~~g----~~~~~---~~~~~~~s~-------------------~~~~~~ 503 (571)
. +.+.+. .+++. .|.+- +-.+...+. ...+++
T Consensus 161 ~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~ee 240 (301)
T KOG3975|consen 161 KVLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEE 240 (301)
T ss_pred eeeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHh
Confidence 0 000000 01110 11100 000000000 011222
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
-.+-+.+..|+.|..||.+....+.+.+.+. ++++-. .+..|.|-- .....+...+.+.|
T Consensus 241 n~d~l~Fyygt~DgW~p~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~-~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 241 NLDSLWFYYGTNDGWVPSHYYDYYKDDVPEE--DLKLDE-DKIPHAFVV-KHAQYMANAVFDMI 300 (301)
T ss_pred cCcEEEEEccCCCCCcchHHHHHHhhhcchh--ceeecc-ccCCcceee-cccHHHHHHHHHhh
Confidence 2357889999999999999888888877543 455544 788999833 22333444454443
No 227
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.55 E-value=0.0079 Score=56.90 Aligned_cols=115 Identities=14% Similarity=0.129 Sum_probs=70.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-Ceee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~ 159 (571)
.++-+|-..|+...+..-...+.-..+......+..||||++ ++++||..+...+|.+|..+|+.+.+...... .| +
T Consensus 216 ~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrF-LYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~-P 293 (346)
T COG2706 216 DVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRF-LYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQF-P 293 (346)
T ss_pred EEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCE-EEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcC-C
Confidence 445555555666555332222222345667788999999975 45569999888999999999987665443222 11 0
Q ss_pred ccCCcccCCCCCccCCCeEEEEE-ecCCccEEEEEeCCCceeeceee
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTCLGPITE 205 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s-~~~g~~~l~~~~~~~~~~~~lT~ 205 (571)
+.|... +.+.+++.+ .++..-.+|.++.++|+...+..
T Consensus 294 --R~F~i~------~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~ 332 (346)
T COG2706 294 --RDFNIN------PSGRFLIAANQKSDNITVFERDKETGRLTLLGR 332 (346)
T ss_pred --ccceeC------CCCCEEEEEccCCCcEEEEEEcCCCceEEeccc
Confidence 112221 223355554 44556788999988887766654
No 228
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=97.55 E-value=0.0051 Score=59.86 Aligned_cols=152 Identities=14% Similarity=0.090 Sum_probs=96.1
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|+-||..||+-..+ -.+.+|+..++....+
T Consensus 238 VT~L~Wn~~G~~LatG~~~------------------------------------G~~riw~~~G~l~~tl--------- 272 (524)
T KOG0273|consen 238 VTSLDWNNDGTLLATGSED------------------------------------GEARIWNKDGNLISTL--------- 272 (524)
T ss_pred cceEEecCCCCeEEEeecC------------------------------------cEEEEEecCchhhhhh---------
Confidence 3568899999999885543 1357788887765544
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
....+.+..+.|+.+|.+|+...-.. .+.+.|..+|++++.....+..-++. .|-++.=+..+..
T Consensus 273 ~~HkgPI~slKWnk~G~yilS~~vD~----ttilwd~~~g~~~q~f~~~s~~~lDV-----------dW~~~~~F~ts~t 337 (524)
T KOG0273|consen 273 GQHKGPIFSLKWNKKGTYILSGGVDG----TTILWDAHTGTVKQQFEFHSAPALDV-----------DWQSNDEFATSST 337 (524)
T ss_pred hccCCceEEEEEcCCCCEEEeccCCc----cEEEEeccCceEEEeeeeccCCccce-----------EEecCceEeecCC
Confidence 23556788999999999776543222 37889999999988765433211111 1222222334556
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
+|--++|.++.+....+..- ..-++..+ .|+|.|..|.-. +.++ ...||.+.
T Consensus 338 d~~i~V~kv~~~~P~~t~~G-H~g~V~al-k~n~tg~LLaS~-SdD~--TlkiWs~~ 389 (524)
T KOG0273|consen 338 DGCIHVCKVGEDRPVKTFIG-HHGEVNAL-KWNPTGSLLASC-SDDG--TLKIWSMG 389 (524)
T ss_pred CceEEEEEecCCCcceeeec-ccCceEEE-EECCCCceEEEe-cCCC--eeEeeecC
Confidence 77778889887665444443 44455555 598888755444 4444 37888765
No 229
>PTZ00420 coronin; Provisional
Probab=97.54 E-value=0.12 Score=54.44 Aligned_cols=118 Identities=13% Similarity=0.077 Sum_probs=64.0
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
....+..+.|+|++..++.....++ .|.+.|+.+++........ .. ... ..|++++ ++..+..+
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~Dg---tIrIWDl~tg~~~~~i~~~-~~-------V~S----lswspdG~lLat~s~D 188 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDS---FVNIWDIENEKRAFQINMP-KK-------LSS----LKWNIKGNLLSGTCVG 188 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCC---eEEEEECCCCcEEEEEecC-Cc-------EEE----EEECCCCCEEEEEecC
Confidence 4456888999999986554444432 3778899888743222111 10 001 1345555 55555444
Q ss_pred CccEEEEEeCCCcee-eceeecCeEE----EEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 186 GFRHLYLHDINGTCL-GPITEGDWMV----EQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 186 g~~~l~~~~~~~~~~-~~lT~~~~~~----~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+ .|.++|+.+++. ..+....... ..+..+++++++|+.++.... ..+++..+++
T Consensus 189 ~--~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~-~~R~VkLWDl 247 (568)
T PTZ00420 189 K--HMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKN-NMREMKLWDL 247 (568)
T ss_pred C--EEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCC-CccEEEEEEC
Confidence 4 467777766543 2232221111 112235578887777775543 2466777776
No 230
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.53 E-value=0.0019 Score=62.62 Aligned_cols=207 Identities=13% Similarity=0.099 Sum_probs=116.2
Q ss_pred eeeeecccceeeeeccC----------------CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccC
Q 008274 7 VLQTHGLAEYIAQEEMD----------------RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 70 (571)
Q Consensus 7 ~~~~~g~~~~~~~~~~~----------------~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 70 (571)
+.++.|...|+|.=++. ....+..||||++||..-..
T Consensus 272 ~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~--------------------------- 324 (514)
T KOG2055|consen 272 VIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNN--------------------------- 324 (514)
T ss_pred EEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccC---------------------------
Confidence 66777888887753321 12346689999988774321
Q ss_pred CCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE
Q 008274 71 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 71 ~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~ 150 (571)
..|++....+++... + ...++.+..++|+.||+.|+.+...+ +||..|+....+....
T Consensus 325 ---------G~I~lLhakT~eli~-s--------~KieG~v~~~~fsSdsk~l~~~~~~G----eV~v~nl~~~~~~~rf 382 (514)
T KOG2055|consen 325 ---------GHIHLLHAKTKELIT-S--------FKIEGVVSDFTFSSDSKELLASGGTG----EVYVWNLRQNSCLHRF 382 (514)
T ss_pred ---------ceEEeehhhhhhhhh-e--------eeeccEEeeEEEecCCcEEEEEcCCc----eEEEEecCCcceEEEE
Confidence 246777777766421 1 12467888999999998777664444 4999999987654432
Q ss_pred EeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEe--CCCceeeceeec-C--eEEEEEEEEeecCcEEE
Q 008274 151 VEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHD--INGTCLGPITEG-D--WMVEQIVGVNEASGQVY 224 (571)
Q Consensus 151 ~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~--~~~~~~~~lT~~-~--~~~~~~~~~s~dg~~l~ 224 (571)
...+. + .+..+. .+.++ ++.+-.+.|.-+||-.+ ..+++++++..- + ..+.+. .|++|+..|.
T Consensus 383 ~D~G~--v-~gts~~-------~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl-~Fn~d~qiLA 451 (514)
T KOG2055|consen 383 VDDGS--V-HGTSLC-------ISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSL-QFNHDAQILA 451 (514)
T ss_pred eecCc--c-ceeeee-------ecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeee-eeCcchhhhh
Confidence 22111 0 011111 13333 55555667888888865 234445555431 1 233444 5999998887
Q ss_pred EEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEE
Q 008274 225 FTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDF 277 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~ 277 (571)
+.++... ..+..+.+.+-.- --+.|..-+.-.....+.|||.|.++++-
T Consensus 452 iaS~~~k---nalrLVHvPS~TV-FsNfP~~n~~vg~vtc~aFSP~sG~lAvG 500 (514)
T KOG2055|consen 452 IASRVKK---NALRLVHVPSCTV-FSNFPTSNTKVGHVTCMAFSPNSGYLAVG 500 (514)
T ss_pred hhhhccc---cceEEEeccceee-eccCCCCCCcccceEEEEecCCCceEEee
Confidence 7776543 2222222211000 00123332222234556999998888764
No 231
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.52 E-value=0.025 Score=52.52 Aligned_cols=233 Identities=12% Similarity=0.082 Sum_probs=122.1
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCce-EEEeccCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV-SWMDLQCGG 101 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~-~~~~~~~~~ 101 (571)
.-...+.||+||++|.=.+.+ . .+-+||+-.|.. +++.+
T Consensus 66 ~pi~sl~WS~dgr~LltsS~D-~-----------------------------------si~lwDl~~gs~l~rirf---- 105 (405)
T KOG1273|consen 66 RPITSLCWSRDGRKLLTSSRD-W-----------------------------------SIKLWDLLKGSPLKRIRF---- 105 (405)
T ss_pred cceeEEEecCCCCEeeeecCC-c-----------------------------------eeEEEeccCCCceeEEEc----
Confidence 335668899999998554433 1 356788776653 44433
Q ss_pred CCCCCCCceeEEEEEccCC--eEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC--eeeccCCcccCCCCCccCCC-
Q 008274 102 TDQNYDEEYLARVNWMHGN--ILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS--WVNLHDCFTPLDKGVTKYSG- 176 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg--~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~--w~~~~~~~~~~~~~~~~~~d- 176 (571)
+..+....|-|-. +.++...+.. =++++...+..+.|....+.. ....... .+..
T Consensus 106 ------~spv~~~q~hp~k~n~~va~~~~~s-----p~vi~~s~~~h~~Lp~d~d~dln~sas~~~---------fdr~g 165 (405)
T KOG1273|consen 106 ------DSPVWGAQWHPRKRNKCVATIMEES-----PVVIDFSDPKHSVLPKDDDGDLNSSASHGV---------FDRRG 165 (405)
T ss_pred ------cCccceeeeccccCCeEEEEEecCC-----cEEEEecCCceeeccCCCcccccccccccc---------ccCCC
Confidence 2344456788743 3444444333 255666666666665543321 1111111 1222
Q ss_pred eEEEEEecCCccEEEEEeCCCcee---eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE-eCCCCCCCCCC
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCL---GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK-LYPDWNHTLEA 252 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~---~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-l~~~g~~~~~~ 252 (571)
.+++.....|+-.+|- .++-+. -++|.- -.+.++. ++..|+.+.+.+.+.- -..|... +...|+.. .
T Consensus 166 ~yIitGtsKGkllv~~--a~t~e~vas~rits~-~~IK~I~-~s~~g~~liiNtsDRv---IR~ye~~di~~~~r~~--e 236 (405)
T KOG1273|consen 166 KYIITGTSKGKLLVYD--AETLECVASFRITSV-QAIKQII-VSRKGRFLIINTSDRV---IRTYEISDIDDEGRDG--E 236 (405)
T ss_pred CEEEEecCcceEEEEe--cchheeeeeeeechh-eeeeEEE-EeccCcEEEEecCCce---EEEEehhhhcccCccC--C
Confidence 3666656667655544 334321 233331 1344554 7888888887765432 3333322 21122211 1
Q ss_pred CeE------ecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEc
Q 008274 253 PVK------LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQA 326 (571)
Q Consensus 253 ~~~------lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (571)
++. +.+...+..+-||.+|.|++... .....||+.....|..++.|..+. -+.+....+.....+....
T Consensus 237 ~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s---~~aHaLYIWE~~~GsLVKILhG~k--gE~l~DV~whp~rp~i~si 311 (405)
T KOG1273|consen 237 VEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGS---ARAHALYIWEKSIGSLVKILHGTK--GEELLDVNWHPVRPIIASI 311 (405)
T ss_pred cChhHHHHHHHhhhhhhheeecCCccEEEecc---ccceeEEEEecCCcceeeeecCCc--hhheeecccccceeeeeec
Confidence 211 11222345678999998765533 567799999987888777776542 1334444454444444444
Q ss_pred CCC
Q 008274 327 NDG 329 (571)
Q Consensus 327 ~dg 329 (571)
..|
T Consensus 312 ~sg 314 (405)
T KOG1273|consen 312 ASG 314 (405)
T ss_pred cCC
Confidence 444
No 232
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.51 E-value=0.00014 Score=74.79 Aligned_cols=116 Identities=20% Similarity=0.224 Sum_probs=68.7
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCC----CchhHHHHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRI----DAEDQLTGAEWL 424 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~----~~~D~~~~~~~l 424 (571)
-|++|++-|..... ..+. .......+..+.|-.++.+.+|-.|.+-. +......++.-. .++|+...++++
T Consensus 29 gpifl~~ggE~~~~---~~~~-~~~~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 29 GPIFLYIGGEGPIE---PFWI-NNGFMWELAKEFGALVVALEHRYYGKSQP-FGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp SEEEEEE--SS-HH---HHHH-H-HHHHHHHHHHTEEEEEE--TTSTTB-T-TGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccc---hhhh-cCChHHHHHHHcCCcEEEeehhhhcCCCC-ccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 68988885532221 1111 11233445557899999999997665531 111111122211 367888888888
Q ss_pred HHcC-CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 425 IKQG-LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 425 ~~~~-~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
..+. ..+..+++++|.||||.+++++-.++|++|.++++.++++.
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 8653 34567999999999999999999999999999888776554
No 233
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.51 E-value=0.057 Score=53.68 Aligned_cols=188 Identities=12% Similarity=0.089 Sum_probs=96.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec--cCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR--SQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r--~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
..+.+|.++++...+... .....-..++++||++++..+... .......|.++.++|+.+.+......+-
T Consensus 16 ~~~~~d~~~g~l~~~~~~-------~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~- 87 (345)
T PF10282_consen 16 YVFRFDEETGTLTLVQTV-------AEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGS- 87 (345)
T ss_dssp EEEEEETTTTEEEEEEEE-------EESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSS-
T ss_pred EEEEEcCCCCCceEeeee-------cCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCC-
Confidence 344455578887665431 112233346789999877666554 3445567788888888887765432110
Q ss_pred eccCCcccCCCCCccCCC-eEEEEEec-CCccEEEEEeCCCceeeceee--------------cCeEEEEEEEEeecCcE
Q 008274 159 NLHDCFTPLDKGVTKYSG-GFIWASEK-TGFRHLYLHDINGTCLGPITE--------------GDWMVEQIVGVNEASGQ 222 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d-~~~~~s~~-~g~~~l~~~~~~~~~~~~lT~--------------~~~~~~~~~~~s~dg~~ 222 (571)
.|+.. ..+++ ++++.++- .|.-.++.++.++ ....... ..-..+.. .++|||++
T Consensus 88 ------~p~~i--~~~~~g~~l~vany~~g~v~v~~l~~~g-~l~~~~~~~~~~g~g~~~~rq~~~h~H~v-~~~pdg~~ 157 (345)
T PF10282_consen 88 ------SPCHI--AVDPDGRFLYVANYGGGSVSVFPLDDDG-SLGEVVQTVRHEGSGPNPDRQEGPHPHQV-VFSPDGRF 157 (345)
T ss_dssp ------CEEEE--EECTTSSEEEEEETTTTEEEEEEECTTS-EEEEEEEEEESEEEESSTTTTSSTCEEEE-EE-TTSSE
T ss_pred ------CcEEE--EEecCCCEEEEEEccCCeEEEEEccCCc-ccceeeeecccCCCCCcccccccccceeE-EECCCCCE
Confidence 01110 12344 37777665 4544455555443 3222210 11223444 48999999
Q ss_pred EEEEEcCCCCceeEEEEEEeCCCCC-CCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 223 VYFTGTLDGPLESHLYCAKLYPDWN-HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 223 l~~~~~~~~~~~~~l~~~~l~~~g~-~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
+|..-...+ ...+|.++- .+. ........+..+.|-....|+|||+++..+..- + ..+.++++.
T Consensus 158 v~v~dlG~D--~v~~~~~~~--~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~-s--~~v~v~~~~ 222 (345)
T PF10282_consen 158 VYVPDLGAD--RVYVYDIDD--DTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNEL-S--NTVSVFDYD 222 (345)
T ss_dssp EEEEETTTT--EEEEEEE-T--TS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETT-T--TEEEEEEEE
T ss_pred EEEEecCCC--EEEEEEEeC--CCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCC-C--CcEEEEeec
Confidence 987644332 245555442 221 000012234555666677999999876555433 2 366666654
No 234
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.50 E-value=0.048 Score=56.43 Aligned_cols=164 Identities=10% Similarity=0.074 Sum_probs=85.6
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEEC-CCCceE-EEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEE
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI-KTGQRK-VILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWAS 182 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~-~~g~~~-~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s 182 (571)
+....+..+.|||||++++-.+... .|.+.|+ +.+... .+..++ .++.. - .+++++ +++..
T Consensus 201 ~h~~~v~~~~fs~d~~~l~s~s~D~----tiriwd~~~~~~~~~~l~gH~--~~v~~-~---------~f~p~g~~i~Sg 264 (456)
T KOG0266|consen 201 GHTRGVSDVAFSPDGSYLLSGSDDK----TLRIWDLKDDGRNLKTLKGHS--TYVTS-V---------AFSPDGNLLVSG 264 (456)
T ss_pred ccccceeeeEECCCCcEEEEecCCc----eEEEeeccCCCeEEEEecCCC--CceEE-E---------EecCCCCEEEEe
Confidence 4566788999999999777665544 3677777 444443 332222 12211 1 123333 55544
Q ss_pred ecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 183 EKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
..++- +.+.+..+++. +.|....-.+..+ .++++|+.|+-.+. ++ .+...++. .+... -...+...+.
T Consensus 265 s~D~t--vriWd~~~~~~~~~l~~hs~~is~~-~f~~d~~~l~s~s~-d~----~i~vwd~~-~~~~~--~~~~~~~~~~ 333 (456)
T KOG0266|consen 265 SDDGT--VRIWDVRTGECVRKLKGHSDGISGL-AFSPDGNLLVSASY-DG----TIRVWDLE-TGSKL--CLKLLSGAEN 333 (456)
T ss_pred cCCCc--EEEEeccCCeEEEeeeccCCceEEE-EECCCCCEEEEcCC-Cc----cEEEEECC-CCcee--eeecccCCCC
Confidence 44554 44555555544 4444433334444 48999987777643 33 33444441 12100 0112222222
Q ss_pred ---eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 262 ---KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 262 ---~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
...+.++|++++++...... .+-+.++..+...+.
T Consensus 334 ~~~~~~~~fsp~~~~ll~~~~d~----~~~~w~l~~~~~~~~ 371 (456)
T KOG0266|consen 334 SAPVTSVQFSPNGKYLLSASLDR----TLKLWDLRSGKSVGT 371 (456)
T ss_pred CCceeEEEECCCCcEEEEecCCC----eEEEEEccCCcceee
Confidence 24568999999887654332 456666655554443
No 235
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.48 E-value=0.0049 Score=58.04 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=90.5
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
+..++....|.+||..++..+-.+ ..|-+-|+++|....|....-++. +-+ -|+||+ .+|.+.-+
T Consensus 194 gh~pVtsmqwn~dgt~l~tAS~gs---ssi~iWdpdtg~~~pL~~~glgg~-------slL----kwSPdgd~lfaAt~d 259 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTASFGS---SSIMIWDPDTGQKIPLIPKGLGGF-------SLL----KWSPDGDVLFAATCD 259 (445)
T ss_pred CCceeeEEEEcCCCCEEeecccCc---ceEEEEcCCCCCcccccccCCCce-------eeE----EEcCCCCEEEEeccc
Confidence 456889999999999887765544 348888999998888752211111 111 356766 66655555
Q ss_pred CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC----C----------
Q 008274 186 GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL----E---------- 251 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~----~---------- 251 (571)
+-..||..+-.-.+.+.++... .+... .|+|+|+.|.|+.... .-||++.. ++...+ .
T Consensus 260 avfrlw~e~q~wt~erw~lgsg-rvqta-cWspcGsfLLf~~sgs----p~lysl~f--~~~~~~~~~~~~~k~~lliaD 331 (445)
T KOG2139|consen 260 AVFRLWQENQSWTKERWILGSG-RVQTA-CWSPCGSFLLFACSGS----PRLYSLTF--DGEDSVFLRPQSIKRVLLIAD 331 (445)
T ss_pred ceeeeehhcccceecceeccCC-ceeee-eecCCCCEEEEEEcCC----ceEEEEee--cCCCccccCcccceeeeeecc
Confidence 6556774432222333343322 34444 4999999999998643 45676665 221000 0
Q ss_pred -------CCeEecCCCceEEEEECCCCCEEEEEeeCCC
Q 008274 252 -------APVKLTNGKGKHVAVLDHNMRNFVDFHDSLD 282 (571)
Q Consensus 252 -------~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~ 282 (571)
..+++-+ .+....++.|.|.+++.++...+
T Consensus 332 L~e~ti~ag~~l~c-geaq~lawDpsGeyLav~fKg~~ 368 (445)
T KOG2139|consen 332 LQEVTICAGQRLCC-GEAQCLAWDPSGEYLAVIFKGQS 368 (445)
T ss_pred chhhhhhcCccccc-CccceeeECCCCCEEEEEEcCCc
Confidence 0011111 12345589999999998887643
No 236
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=97.47 E-value=0.0021 Score=61.53 Aligned_cols=184 Identities=13% Similarity=0.159 Sum_probs=101.3
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+....+|.|+|++|+=++.|. .-.+||+.+++...+.
T Consensus 262 ~RVs~VafHPsG~~L~TasfD~------------------------------------tWRlWD~~tk~ElL~Q------ 299 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTASFDS------------------------------------TWRLWDLETKSELLLQ------ 299 (459)
T ss_pred hhheeeeecCCCceeeeccccc------------------------------------chhhcccccchhhHhh------
Confidence 3556778888888887666552 2267899998765442
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWAS 182 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s 182 (571)
.+....+.+++|-|||++++.-.... ...|| |+.+|.+.-....-... .+.- .|+|+|+...+
T Consensus 300 --EGHs~~v~~iaf~~DGSL~~tGGlD~--~~RvW--DlRtgr~im~L~gH~k~------I~~V-----~fsPNGy~lAT 362 (459)
T KOG0272|consen 300 --EGHSKGVFSIAFQPDGSLAATGGLDS--LGRVW--DLRTGRCIMFLAGHIKE------ILSV-----AFSPNGYHLAT 362 (459)
T ss_pred --cccccccceeEecCCCceeeccCccc--hhhee--ecccCcEEEEecccccc------eeeE-----eECCCceEEee
Confidence 23566788999999998766532222 22344 78888765443321111 1111 46788865543
Q ss_pred e-cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC-
Q 008274 183 E-KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK- 260 (571)
Q Consensus 183 ~-~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~- 260 (571)
. .++.-.||-+.-. ...-.+....-.|..+ .++|+.++...++.-++- .+||.-. ++. ..+.|..-+
T Consensus 363 gs~Dnt~kVWDLR~r-~~ly~ipAH~nlVS~V-k~~p~~g~fL~TasyD~t--~kiWs~~---~~~----~~ksLaGHe~ 431 (459)
T KOG0272|consen 363 GSSDNTCKVWDLRMR-SELYTIPAHSNLVSQV-KYSPQEGYFLVTASYDNT--VKIWSTR---TWS----PLKSLAGHEG 431 (459)
T ss_pred cCCCCcEEEeeeccc-ccceecccccchhhhe-EecccCCeEEEEcccCcc--eeeecCC---Ccc----cchhhcCCcc
Confidence 2 2343344433211 1112222222233444 488876666666665553 6777532 232 333444323
Q ss_pred ceEEEEECCCCCEEEE
Q 008274 261 GKHVAVLDHNMRNFVD 276 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~ 276 (571)
-..++..|+|+.+++-
T Consensus 432 kV~s~Dis~d~~~i~t 447 (459)
T KOG0272|consen 432 KVISLDISPDSQAIAT 447 (459)
T ss_pred ceEEEEeccCCceEEE
Confidence 3556788999876643
No 237
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=97.46 E-value=0.067 Score=53.18 Aligned_cols=97 Identities=13% Similarity=0.021 Sum_probs=53.1
Q ss_pred eeeeeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 4 AFHVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 4 ~~~~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
.|+.+|-|...-.+|.|.-.-..--.+||.|-+||= -|..+ .+.
T Consensus 41 v~ir~i~~~~~~~iYtEH~~~vtVAkySPsG~yiAS--GD~sG----------------------------------~vR 84 (603)
T KOG0318|consen 41 VIIRNIDNPASVDIYTEHAHQVTVAKYSPSGFYIAS--GDVSG----------------------------------KVR 84 (603)
T ss_pred EEEEECCCccceeeeccccceeEEEEeCCCceEEee--cCCcC----------------------------------cEE
Confidence 566777777777777775322333447887765432 22111 356
Q ss_pred EEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC
Q 008274 84 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK 142 (571)
Q Consensus 84 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~ 142 (571)
+||-...+.. |.-+ +....+.+..++|++|+++|+.+-+..++--.+|..|..
T Consensus 85 IWdtt~~~hi-LKne-----f~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG 137 (603)
T KOG0318|consen 85 IWDTTQKEHI-LKNE-----FQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSG 137 (603)
T ss_pred EEeccCccee-eeee-----eeecccccccceeCCCCcEEEEEecCccceeEEEEecCC
Confidence 6666543221 1110 112345667789999999888775444333344544443
No 238
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.46 E-value=0.00025 Score=71.65 Aligned_cols=88 Identities=15% Similarity=-0.022 Sum_probs=60.1
Q ss_pred cchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 371 TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 371 ~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
.|..+++.|.+.||.+ ..|++|.+..-+. .. .....++++.+.++.+.+.. ...++.|+||||||.++..+
T Consensus 109 ~~~~li~~L~~~GY~~-~~dL~g~gYDwR~---~~---~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~f 179 (440)
T PLN02733 109 YFHDMIEQLIKWGYKE-GKTLFGFGYDFRQ---SN---RLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKCF 179 (440)
T ss_pred HHHHHHHHHHHcCCcc-CCCcccCCCCccc---cc---cHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHHH
Confidence 4566789999999876 7899988754321 10 00111456666666665542 34689999999999999999
Q ss_pred HhcCCCe----eEEEEEcCcc
Q 008274 451 LARFPDV----FQCAVSGAPV 467 (571)
Q Consensus 451 ~~~~~~~----~~~~v~~~~~ 467 (571)
+..+|+. ++..|++++.
T Consensus 180 l~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 180 MSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHCCHhHHhHhccEEEECCC
Confidence 9888764 5666666553
No 239
>PTZ00420 coronin; Provisional
Probab=97.46 E-value=0.016 Score=60.73 Aligned_cols=138 Identities=14% Similarity=0.174 Sum_probs=69.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~~ 159 (571)
.|.+||+.+++... .+. ....+..+.|+|||+.++...... .|.++|+.+++... +..+... ..
T Consensus 149 tIrIWDl~tg~~~~-~i~--------~~~~V~SlswspdG~lLat~s~D~----~IrIwD~Rsg~~i~tl~gH~g~--~~ 213 (568)
T PTZ00420 149 FVNIWDIENEKRAF-QIN--------MPKKLSSLKWNIKGNLLSGTCVGK----HMHIIDPRKQEIASSFHIHDGG--KN 213 (568)
T ss_pred eEEEEECCCCcEEE-EEe--------cCCcEEEEEECCCCCEEEEEecCC----EEEEEECCCCcEEEEEecccCC--ce
Confidence 46889999886432 221 234577899999999776554322 38888999887542 2111111 00
Q ss_pred ccCCcccCCCCCccCCC-eEEEEEec--CCccEEEEEeCCC-ce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 160 LHDCFTPLDKGVTKYSG-GFIWASEK--TGFRHLYLHDING-TC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d-~~~~~s~~--~g~~~l~~~~~~~-~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
. ..+... .++++ ++++.+.. ...++|.++|+.. +. ...++-+.....-.+.|+++.+.+|.++..++ .
T Consensus 214 s-~~v~~~----~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~--t 286 (568)
T PTZ00420 214 T-KNIWID----GLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDG--N 286 (568)
T ss_pred e-EEEEee----eEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCC--e
Confidence 0 000000 11233 34444332 2346788888764 22 22222111111112347777777777775554 2
Q ss_pred eEEEEE
Q 008274 235 SHLYCA 240 (571)
Q Consensus 235 ~~l~~~ 240 (571)
..+|-+
T Consensus 287 Ir~~e~ 292 (568)
T PTZ00420 287 CRYYQH 292 (568)
T ss_pred EEEEEc
Confidence 444443
No 240
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.43 E-value=0.12 Score=49.22 Aligned_cols=219 Identities=12% Similarity=0.101 Sum_probs=112.0
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|+||+|.| |+....+.. ..+.-|-+|-++|+.+.+.-.
T Consensus 40 ~nptyl~~~~~~~~L-Y~v~~~~~~------------------------------ggvaay~iD~~~G~Lt~ln~~---- 84 (346)
T COG2706 40 GNPTYLAVNPDQRHL-YVVNEPGEE------------------------------GGVAAYRIDPDDGRLTFLNRQ---- 84 (346)
T ss_pred CCCceEEECCCCCEE-EEEEecCCc------------------------------CcEEEEEEcCCCCeEEEeecc----
Confidence 445678899999988 544332110 012335556566777766543
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE---EEeecCCeeec--cCCcccCCCCCccCCCe
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI---LVEELDSWVNL--HDCFTPLDKGVTKYSGG 177 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l---~~~~~~~w~~~--~~~~~~~~~~~~~~~d~ 177 (571)
......-+-++.++||++++.. +-..+...++.++.+ |....+ ..+...+=.+. .+.-... ..+|++
T Consensus 85 --~~~g~~p~yvsvd~~g~~vf~A-nY~~g~v~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a----~~tP~~ 156 (346)
T COG2706 85 --TLPGSPPCYVSVDEDGRFVFVA-NYHSGSVSVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSA----NFTPDG 156 (346)
T ss_pred --ccCCCCCeEEEECCCCCEEEEE-EccCceEEEEEcccC-CccccceeeeecCCCCCCccccCCcccee----eeCCCC
Confidence 1112222557899999765554 444345456666555 554333 22222110000 0000000 124666
Q ss_pred -EEEEEecCCccEEEEEeCCCceeeceeecCe----EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCC-C-
Q 008274 178 -FIWASEKTGFRHLYLHDINGTCLGPITEGDW----MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT-L- 250 (571)
Q Consensus 178 -~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~-~- 250 (571)
+++. .+-|...|++++++.+..+..+.... --+.+. |.|+++..|.+....+. ..+|..+-. .|.-. +
T Consensus 157 ~~l~v-~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~-FHpn~k~aY~v~EL~st--V~v~~y~~~-~g~~~~lQ 231 (346)
T COG2706 157 RYLVV-PDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIV-FHPNGKYAYLVNELNST--VDVLEYNPA-VGKFEELQ 231 (346)
T ss_pred CEEEE-eecCCceEEEEEcccCccccccccccCCCCCcceEE-EcCCCcEEEEEeccCCE--EEEEEEcCC-CceEEEee
Confidence 5554 55577788888887766554443211 113344 99999999998876653 555555531 12100 0
Q ss_pred ---CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 251 ---EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 251 ---~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.-+...+...+.....+|+||+++.. ....-. .|.++..
T Consensus 232 ~i~tlP~dF~g~~~~aaIhis~dGrFLYa-sNRg~d--sI~~f~V 273 (346)
T COG2706 232 TIDTLPEDFTGTNWAAAIHISPDGRFLYA-SNRGHD--SIAVFSV 273 (346)
T ss_pred eeccCccccCCCCceeEEEECCCCCEEEE-ecCCCC--eEEEEEE
Confidence 01111222233445589999987654 333333 4554443
No 241
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.42 E-value=0.0053 Score=65.83 Aligned_cols=109 Identities=16% Similarity=0.131 Sum_probs=62.5
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
..+.-+.++.||||+++++.....+ .|.+.|..+.+...+.+... ...++.+|+|-+ |+.....
T Consensus 127 ~H~~DV~Dv~Wsp~~~~lvS~s~Dn----sViiwn~~tF~~~~vl~~H~-----------s~VKGvs~DP~Gky~ASqsd 191 (942)
T KOG0973|consen 127 GHDSDVLDVNWSPDDSLLVSVSLDN----SVIIWNAKTFELLKVLRGHQ-----------SLVKGVSWDPIGKYFASQSD 191 (942)
T ss_pred cCCCccceeccCCCccEEEEecccc----eEEEEccccceeeeeeeccc-----------ccccceEECCccCeeeeecC
Confidence 4556677899999999888876544 48888999886544333211 112223556655 3333333
Q ss_pred CCccEEEEEeCCCceeeceeecCe------EEEEEEEEeecCcEEEEEEcCCC
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDW------MVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~------~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
+.--.+|+.. +-+..+.+|...- .+..+ +|||||++|......++
T Consensus 192 Drtikvwrt~-dw~i~k~It~pf~~~~~~T~f~Rl-SWSPDG~~las~nA~n~ 242 (942)
T KOG0973|consen 192 DRTLKVWRTS-DWGIEKSITKPFEESPLTTFFLRL-SWSPDGHHLASPNAVNG 242 (942)
T ss_pred CceEEEEEcc-cceeeEeeccchhhCCCcceeeec-ccCCCcCeecchhhccC
Confidence 3444455532 2344455554321 12344 59999998887765444
No 242
>PRK10115 protease 2; Provisional
Probab=97.41 E-value=0.012 Score=63.99 Aligned_cols=118 Identities=15% Similarity=0.079 Sum_probs=70.3
Q ss_pred ceeEEEEEccCCeEEEEEEeccCc-cEEEEEEECCCCc--eEEEEEee-cCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQT-KLKVLKFDIKTGQ--RKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~-~~~i~~~d~~~g~--~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
..+..+.|||||+++++..+...+ ..+|+++|+++|+ ...|.... ...|. .++++|++.+.+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~--------------~D~~~~~y~~~~ 192 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWA--------------NDSWTFYYVRKH 192 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEe--------------eCCCEEEEEEec
Confidence 456778999999998888776654 5589999999997 33332111 01121 134457777664
Q ss_pred CC---ccEEEEEeCCCc--eeeceeec---CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 185 TG---FRHLYLHDINGT--CLGPITEG---DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 185 ~g---~~~l~~~~~~~~--~~~~lT~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.+ ..+||++++.++ +-+.|-.+ .+.+ ....+.|++++++.+......+..++..++
T Consensus 193 ~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~--~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~ 256 (686)
T PRK10115 193 PVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYV--SLHKTTSKHYVVIHLASATTSEVLLLDAEL 256 (686)
T ss_pred CCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEE--EEEEcCCCCEEEEEEECCccccEEEEECcC
Confidence 32 378999998877 33445432 1222 122455888888666655432344444333
No 243
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.37 E-value=0.013 Score=57.04 Aligned_cols=182 Identities=15% Similarity=0.126 Sum_probs=101.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
-+|.||+.+++...+....+. ....+..+.-|||+++|++.-+.+ .|+++-..|++.-.-.+.+.. +.
T Consensus 281 y~ysyDle~ak~~k~~~~~g~-----e~~~~e~FeVShd~~fia~~G~~G----~I~lLhakT~eli~s~KieG~--v~- 348 (514)
T KOG2055|consen 281 YLYSYDLETAKVTKLKPPYGV-----EEKSMERFEVSHDSNFIAIAGNNG----HIHLLHAKTKELITSFKIEGV--VS- 348 (514)
T ss_pred EEEEeeccccccccccCCCCc-----ccchhheeEecCCCCeEEEcccCc----eEEeehhhhhhhhheeeeccE--Ee-
Confidence 369999999988877543111 133566788999999888764333 599999999874322221111 00
Q ss_pred cCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCcee-eceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 161 HDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGTCL-GPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.|. ++.| ..++.+...| ++|.+++..... .+.+. |.-.-..+ +.|.+|.+ +.+++..| -.+|
T Consensus 349 --~~~-------fsSdsk~l~~~~~~G--eV~v~nl~~~~~~~rf~D~G~v~gts~-~~S~ng~y-lA~GS~~G--iVNI 413 (514)
T KOG2055|consen 349 --DFT-------FSSDSKELLASGGTG--EVYVWNLRQNSCLHRFVDDGSVHGTSL-CISLNGSY-LATGSDSG--IVNI 413 (514)
T ss_pred --eEE-------EecCCcEEEEEcCCc--eEEEEecCCcceEEEEeecCccceeee-eecCCCce-EEeccCcc--eEEE
Confidence 011 1233 3566665555 899999866543 33333 22222333 47888873 33444455 3889
Q ss_pred EEEEeCCCCCCCCCCCeEecC---C-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN---G-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~---~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
|..+-.-.+. .++.+.. . ....+..|++|+.. ..++|+. .+..+.+++++.-
T Consensus 414 Yd~~s~~~s~----~PkPik~~dNLtt~Itsl~Fn~d~qi-LAiaS~~-~knalrLVHvPS~ 469 (514)
T KOG2055|consen 414 YDGNSCFAST----NPKPIKTVDNLTTAITSLQFNHDAQI-LAIASRV-KKNALRLVHVPSC 469 (514)
T ss_pred eccchhhccC----CCCchhhhhhhheeeeeeeeCcchhh-hhhhhhc-cccceEEEeccce
Confidence 8754321121 2222221 1 23456689999864 4445553 4456666676443
No 244
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.33 E-value=0.021 Score=53.97 Aligned_cols=108 Identities=10% Similarity=0.074 Sum_probs=66.9
Q ss_pred ccCCCeEEEEEecCCccEEEEEeCCCceeecee-ecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC
Q 008274 172 TKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT-EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL 250 (571)
Q Consensus 172 ~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~ 250 (571)
.|.+|+-.+.+..-|-.+|.+.+.+.++..+|- .+--.+. ...|||||++|+..+-+.. ..|+.-. ....
T Consensus 202 qwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~s-lLkwSPdgd~lfaAt~dav---frlw~e~--q~wt--- 272 (445)
T KOG2139|consen 202 QWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFS-LLKWSPDGDVLFAATCDAV---FRLWQEN--QSWT--- 272 (445)
T ss_pred EEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCcee-eEEEcCCCCEEEEecccce---eeeehhc--ccce---
Confidence 466677555555556788889999888877776 3322233 3459999998877754332 3333211 1221
Q ss_pred CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 251 EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 251 ~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.++.+..........+||.|+++.|+++. .|.+|.+..
T Consensus 273 -~erw~lgsgrvqtacWspcGsfLLf~~sg---sp~lysl~f 310 (445)
T KOG2139|consen 273 -KERWILGSGRVQTACWSPCGSFLLFACSG---SPRLYSLTF 310 (445)
T ss_pred -ecceeccCCceeeeeecCCCCEEEEEEcC---CceEEEEee
Confidence 23333322223445899999999998876 358888776
No 245
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=97.32 E-value=0.05 Score=57.70 Aligned_cols=153 Identities=12% Similarity=0.162 Sum_probs=85.7
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~ 188 (571)
.....+++.+|+.+++-++.. .|-.++..++......+..+..-.. +..+|++ |+..+.-+|.
T Consensus 98 p~r~~~v~g~g~~iaagsdD~----~vK~~~~~D~s~~~~lrgh~apVl~-----------l~~~p~~~fLAvss~dG~- 161 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDT----AVKLLNLDDSSQEKVLRGHDAPVLQ-----------LSYDPKGNFLAVSSCDGK- 161 (933)
T ss_pred cceEEEEecCCcEEEeecCce----eEEEEeccccchheeecccCCceee-----------eeEcCCCCEEEEEecCce-
Confidence 445578999999888876443 4888888876554443322211000 0224444 7666666774
Q ss_pred EEEEEeCCCcee-eceee----cCeE---EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-
Q 008274 189 HLYLHDINGTCL-GPITE----GDWM---VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG- 259 (571)
Q Consensus 189 ~l~~~~~~~~~~-~~lT~----~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~- 259 (571)
++.++++.+.. .-||. .++. ...-+.|+|+|..+.+...++. ..+|+.. ++. ....|...
T Consensus 162 -v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~---Vkvy~r~---~we----~~f~Lr~~~ 230 (933)
T KOG1274|consen 162 -VQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT---VKVYSRK---GWE----LQFKLRDKL 230 (933)
T ss_pred -EEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe---EEEEccC---Cce----eheeecccc
Confidence 55566555432 22332 1122 2234469999988888877654 5666543 222 11222211
Q ss_pred --CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 260 --KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 260 --~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.+....+|||.|+|++.+... .+|.+.+..
T Consensus 231 ~ss~~~~~~wsPnG~YiAAs~~~----g~I~vWnv~ 262 (933)
T KOG1274|consen 231 SSSKFSDLQWSPNGKYIAASTLD----GQILVWNVD 262 (933)
T ss_pred cccceEEEEEcCCCcEEeeeccC----CcEEEEecc
Confidence 124455999999999876543 255555553
No 246
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=97.31 E-value=0.0073 Score=60.08 Aligned_cols=185 Identities=10% Similarity=0.066 Sum_probs=97.2
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeE-EEeecCCCC---------------------CCCCCcccccCCCCCCCCceEE
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRF-RIMHQGKSS---------------------VGSEAQEDHAYPFAGASNVKVR 81 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~-~~~~~~~~~---------------------~~~~~~~~~~y~~~g~~~~~~~ 81 (571)
...++.|||.+.-|||.+-.....|.. .+......+ .| =+...-|+.|.+.....+.
T Consensus 348 gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdy-LcvkvdR~tK~~~~g~f~n 426 (698)
T KOG2314|consen 348 GIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDY-LCVKVDRHTKSKVKGQFSN 426 (698)
T ss_pred cccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcE-EEEEEEeeccccccceEee
Confidence 356788999999999987555444322 211110000 00 1122233444443333445
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
|-++.+.....-...+ +....+..++|-|.|...+.+....+ +....|.+....+..+.+..-..... +
T Consensus 427 ~eIfrireKdIpve~v--------elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~-N- 496 (698)
T KOG2314|consen 427 LEIFRIREKDIPVEVV--------ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFA-N- 496 (698)
T ss_pred EEEEEeeccCCCceee--------ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhccccc-c-
Confidence 5555555433211111 23456778999999986665544443 45567777765555544332211111 1
Q ss_pred cCCcccCCCCCccCCCe-EEEEEe-cCCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcC
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASE-KTGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~-~~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
- ..|+|.| |+.+.. .+....|+.+|.+-...++..... +..... .|+|.|+++...++.
T Consensus 497 -----~----vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~v-eWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 497 -----T----VFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEV-EWDPTGRYVVTSSSS 558 (698)
T ss_pred -----e----EEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccc-eECCCCCEEEEeeeh
Confidence 1 1345555 555432 233567888887654444444332 223344 599999998887763
No 247
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=97.24 E-value=0.1 Score=46.92 Aligned_cols=176 Identities=7% Similarity=0.059 Sum_probs=95.1
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
++.+||+.+++..++ +++ ...+.+..+.|--||+.++.-++.. .-+|| |+..-.+.++.+...+
T Consensus 62 hvRlyD~~S~np~Pv~t~e-------~h~kNVtaVgF~~dgrWMyTgseDg--t~kIW--dlR~~~~qR~~~~~sp---- 126 (311)
T KOG0315|consen 62 HVRLYDLNSNNPNPVATFE-------GHTKNVTAVGFQCDGRWMYTGSEDG--TVKIW--DLRSLSCQRNYQHNSP---- 126 (311)
T ss_pred eeEEEEccCCCCCceeEEe-------ccCCceEEEEEeecCeEEEecCCCc--eEEEE--eccCcccchhccCCCC----
Confidence 577889998876444 332 2346788899999999766554333 33344 5555566666554322
Q ss_pred ccCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
+..- ...++ +=++.++++| +|+..|+... ...+|..++-.......+.+||+.+.-..++.. -.+
T Consensus 127 -------Vn~v-vlhpnQteLis~dqsg--~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~---cyv 193 (311)
T KOG0315|consen 127 -------VNTV-VLHPNQTELISGDQSG--NIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGN---CYV 193 (311)
T ss_pred -------cceE-EecCCcceEEeecCCC--cEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCcc---EEE
Confidence 1000 01222 3455677777 4555665443 345555544333333358999998877765544 344
Q ss_pred EEEEeCCCCCCCCCCCeEec---CCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 238 YCAKLYPDWNHTLEAPVKLT---NGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt---~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
+++-- .......+.++ ..++ ...+-+|||+|+++.. ++. . ..++.+.
T Consensus 194 W~l~~----~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~-ssd-k--tv~iwn~ 244 (311)
T KOG0315|consen 194 WRLLN----HQTASELEPVHKFQAHNGHILRCLLSPDVKYLATC-SSD-K--TVKIWNT 244 (311)
T ss_pred EEccC----CCccccceEhhheecccceEEEEEECCCCcEEEee-cCC-c--eEEEEec
Confidence 44322 11111233333 2233 2345899999988754 332 2 4555554
No 248
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.24 E-value=0.25 Score=48.81 Aligned_cols=185 Identities=11% Similarity=0.134 Sum_probs=87.9
Q ss_pred EEEEEECCC-CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|.+||+++ |+.+.+..- ........+.++|||+.++.... ......+|.++ ++|+.+.+.......
T Consensus 13 ~I~~~~~~~~g~l~~~~~~-------~~~~~~~~l~~spd~~~lyv~~~-~~~~i~~~~~~-~~g~l~~~~~~~~~~--- 80 (330)
T PRK11028 13 QIHVWNLNHEGALTLLQVV-------DVPGQVQPMVISPDKRHLYVGVR-PEFRVLSYRIA-DDGALTFAAESPLPG--- 80 (330)
T ss_pred CEEEEEECCCCceeeeeEE-------ecCCCCccEEECCCCCEEEEEEC-CCCcEEEEEEC-CCCceEEeeeecCCC---
Confidence 467778763 554433221 11223345789999996655433 22332334444 356544333221110
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCC--Cceeece--eecCeEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDIN--GTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~--~~~~~~l--T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
. |.. ...++++ +++.+... ...|..++++ +...+.+ ..+....... .++|+|+++|+.....+
T Consensus 81 -~----p~~--i~~~~~g~~l~v~~~~-~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~-~~~p~g~~l~v~~~~~~--- 148 (330)
T PRK11028 81 -S----PTH--ISTDHQGRFLFSASYN-ANCVSVSPLDKDGIPVAPIQIIEGLEGCHSA-NIDPDNRTLWVPCLKED--- 148 (330)
T ss_pred -C----ceE--EEECCCCCEEEEEEcC-CCeEEEEEECCCCCCCCceeeccCCCcccEe-EeCCCCCEEEEeeCCCC---
Confidence 0 110 1234444 66655432 3445555543 2111111 1122223333 48999999988765444
Q ss_pred eEEEEEEeCCCCCCCC--CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 235 SHLYCAKLYPDWNHTL--EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~--~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.|+.+++...+.... .....+..+.+-....++|||++++...... ..+.++++.
T Consensus 149 -~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~---~~v~v~~~~ 205 (330)
T PRK11028 149 -RIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELN---SSVDVWQLK 205 (330)
T ss_pred -EEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCC---CEEEEEEEe
Confidence 355555532232100 0111223344455679999998765543322 367777764
No 249
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=97.23 E-value=0.00068 Score=42.89 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=23.8
Q ss_pred CCceeEEEEEccCCeEEEEEEecc-CccEEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRS-QTKLKVLK 138 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~-~~~~~i~~ 138 (571)
.......++|||||+.|+|++++. .+..+||+
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 455677899999999999999887 34556764
No 250
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.22 E-value=0.023 Score=53.47 Aligned_cols=149 Identities=13% Similarity=0.091 Sum_probs=83.7
Q ss_pred EEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEE
Q 008274 113 RVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 191 (571)
Q Consensus 113 ~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~ 191 (571)
.|.|.+ +|. ++++.-.. ..|+++|.++++.+.+......+.. ...+++-+++++..+ +.
T Consensus 4 gp~~d~~~g~-l~~~D~~~---~~i~~~~~~~~~~~~~~~~~~~G~~-------------~~~~~g~l~v~~~~~---~~ 63 (246)
T PF08450_consen 4 GPVWDPRDGR-LYWVDIPG---GRIYRVDPDTGEVEVIDLPGPNGMA-------------FDRPDGRLYVADSGG---IA 63 (246)
T ss_dssp EEEEETTTTE-EEEEETTT---TEEEEEETTTTEEEEEESSSEEEEE-------------EECTTSEEEEEETTC---EE
T ss_pred ceEEECCCCE-EEEEEcCC---CEEEEEECCCCeEEEEecCCCceEE-------------EEccCCEEEEEEcCc---eE
Confidence 589998 554 44443222 2599999999987654322111110 011334444445544 45
Q ss_pred EEeCCCceeeceeec-----C-eEEEEEEEEeecCcEEEEEEcCCCCc--e--eEEEEEEeCCCCCCCCCCCeEec-CCC
Q 008274 192 LHDINGTCLGPITEG-----D-WMVEQIVGVNEASGQVYFTGTLDGPL--E--SHLYCAKLYPDWNHTLEAPVKLT-NGK 260 (571)
Q Consensus 192 ~~~~~~~~~~~lT~~-----~-~~~~~~~~~s~dg~~l~~~~~~~~~~--~--~~l~~~~l~~~g~~~~~~~~~lt-~~~ 260 (571)
++++.+++.+.+... . ....+. .++++|+ |||+....... . -.||+++. ++ +...+. ...
T Consensus 64 ~~d~~~g~~~~~~~~~~~~~~~~~~ND~-~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~--~~-----~~~~~~~~~~ 134 (246)
T PF08450_consen 64 VVDPDTGKVTVLADLPDGGVPFNRPNDV-AVDPDGN-LYVTDSGGGGASGIDPGSVYRIDP--DG-----KVTVVADGLG 134 (246)
T ss_dssp EEETTTTEEEEEEEEETTCSCTEEEEEE-EE-TTS--EEEEEECCBCTTCGGSEEEEEEET--TS-----EEEEEEEEES
T ss_pred EEecCCCcEEEEeeccCCCcccCCCceE-EEcCCCC-EEEEecCCCccccccccceEEECC--CC-----eEEEEecCcc
Confidence 558888877666442 2 233444 4899987 88877643211 1 57999997 43 223332 222
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
..+...++||++.+++.-+. -..|+.+++.
T Consensus 135 ~pNGi~~s~dg~~lyv~ds~---~~~i~~~~~~ 164 (246)
T PF08450_consen 135 FPNGIAFSPDGKTLYVADSF---NGRIWRFDLD 164 (246)
T ss_dssp SEEEEEEETTSSEEEEEETT---TTEEEEEEEE
T ss_pred cccceEECCcchheeecccc---cceeEEEecc
Confidence 34556899999977654333 2368888874
No 251
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.15 E-value=0.026 Score=52.35 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=68.9
Q ss_pred EEEEEECCC---CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCC
Q 008274 81 RLGVVSAAG---GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDS 156 (571)
Q Consensus 81 ~l~~~dl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~ 156 (571)
.|.+||+.. |.-+...+. .+.......+.||||||.|+..++.+ .++++|+-+|+...-.... ...
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~------~~~~~ew~~l~FS~dGK~iLlsT~~s----~~~~lDAf~G~~~~tfs~~~~~~ 232 (311)
T KOG1446|consen 163 LIKLYDLRSFDKGPFTTFSIT------DNDEAEWTDLEFSPDGKSILLSTNAS----FIYLLDAFDGTVKSTFSGYPNAG 232 (311)
T ss_pred eEEEEEecccCCCCceeEccC------CCCccceeeeEEcCCCCEEEEEeCCC----cEEEEEccCCcEeeeEeeccCCC
Confidence 466677663 333333332 12344567789999999888877655 4999999999854322222 111
Q ss_pred eeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEc
Q 008274 157 WVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~ 228 (571)
-..... ..+||+ |++.+..+|.-|+|.+ ++++....+.+. -.......|.| ++..|.+.
T Consensus 233 ~~~~~a---------~ftPds~Fvl~gs~dg~i~vw~~--~tg~~v~~~~~~~~~~~~~~~fnP--~~~mf~sa 293 (311)
T KOG1446|consen 233 NLPLSA---------TFTPDSKFVLSGSDDGTIHVWNL--ETGKKVAVLRGPNGGPVSCVRFNP--RYAMFVSA 293 (311)
T ss_pred CcceeE---------EECCCCcEEEEecCCCcEEEEEc--CCCcEeeEecCCCCCCccccccCC--ceeeeeec
Confidence 111111 234665 7777777887777766 455544444442 11222334555 44444443
No 252
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.15 E-value=0.015 Score=56.07 Aligned_cols=130 Identities=17% Similarity=0.178 Sum_probs=72.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC--Cce---E-EEEEee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT--GQR---K-VILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~--g~~---~-~l~~~~ 153 (571)
-.||.+|..++..+.+. +.-..-..++|||||+.+.++.... ..|++++.+. |.. + .+....
T Consensus 143 G~lyr~~p~g~~~~l~~---------~~~~~~NGla~SpDg~tly~aDT~~---~~i~r~~~d~~~g~~~~~~~~~~~~~ 210 (307)
T COG3386 143 GSLYRVDPDGGVVRLLD---------DDLTIPNGLAFSPDGKTLYVADTPA---NRIHRYDLDPATGPIGGRRGFVDFDE 210 (307)
T ss_pred ceEEEEcCCCCEEEeec---------CcEEecCceEECCCCCEEEEEeCCC---CeEEEEecCcccCccCCcceEEEccC
Confidence 46888887555444331 1122345689999999766664433 2478887752 221 1 111100
Q ss_pred cCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 154 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
+. ..+.+...+.++-+|.+-..+-..|-++++++.....+.-....+..+..-.++.+.||+++...+
T Consensus 211 ~~----------G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~~ 278 (307)
T COG3386 211 EP----------GLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARSG 278 (307)
T ss_pred CC----------CCCCceEEeCCCCEEEecccCCceEEEECCCCcEEEEEECCCCCCccceEeCCCcCEEEEEecCCC
Confidence 11 111111234556555433322246888888877666666553344555545778899999998763
No 253
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.12 E-value=0.12 Score=49.87 Aligned_cols=156 Identities=13% Similarity=0.124 Sum_probs=85.6
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+++.|-|+.+.|.|+=.. + ..++.+|.++|+.+.....
T Consensus 26 ~gEgP~w~~~~~~L~w~DI~--~---------------------------------~~i~r~~~~~g~~~~~~~p----- 65 (307)
T COG3386 26 LGEGPVWDPDRGALLWVDIL--G---------------------------------GRIHRLDPETGKKRVFPSP----- 65 (307)
T ss_pred cccCccCcCCCCEEEEEeCC--C---------------------------------CeEEEecCCcCceEEEECC-----
Confidence 45778898898888663211 1 1467788887766655432
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
........--++..|+.+ .+. +++++.+++.. +.++....+. +.-++.+.. -++++ |+|.
T Consensus 66 -----~~~~~~~~~d~~g~Lv~~-~~g-----~~~~~~~~~~~~t~~~~~~~~~-----~~~r~ND~~--v~pdG~~wfg 127 (307)
T COG3386 66 -----GGFSSGALIDAGGRLIAC-EHG-----VRLLDPDTGGKITLLAEPEDGL-----PLNRPNDGV--VDPDGRIWFG 127 (307)
T ss_pred -----CCcccceeecCCCeEEEE-ccc-----cEEEeccCCceeEEeccccCCC-----CcCCCCcee--EcCCCCEEEe
Confidence 122333333333333333 333 67788787777 4443322220 001111111 13444 5554
Q ss_pred Eec---------CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 182 SEK---------TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 182 s~~---------~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.-. .....||++++.++..+.+.. ...+..-..||||++.+|++=+.. ..|+++++
T Consensus 128 t~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~-~~~~~NGla~SpDg~tly~aDT~~----~~i~r~~~ 192 (307)
T COG3386 128 DMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDD-DLTIPNGLAFSPDGKTLYVADTPA----NRIHRYDL 192 (307)
T ss_pred CCCccccCccccCCcceEEEEcCCCCEEEeecC-cEEecCceEECCCCCEEEEEeCCC----CeEEEEec
Confidence 222 113479999986666555554 344443345999999999986644 45777776
No 254
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.12 E-value=0.012 Score=53.53 Aligned_cols=185 Identities=17% Similarity=0.057 Sum_probs=98.8
Q ss_pred EEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCC
Q 008274 334 GALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID 413 (571)
Q Consensus 334 ~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~ 413 (571)
.|+..|+. +. .||.+-||....... .-.|+.+.+.|+++||+|++.-|.-+-.... -....
T Consensus 8 ~wvl~P~~------P~-gvihFiGGaf~ga~P---~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~-~A~~~-------- 68 (250)
T PF07082_consen 8 SWVLIPPR------PK-GVIHFIGGAFVGAAP---QITYRYLLERLADRGYAVIATPYVVTFDHQA-IAREV-------- 68 (250)
T ss_pred cEEEeCCC------CC-EEEEEcCcceeccCc---HHHHHHHHHHHHhCCcEEEEEecCCCCcHHH-HHHHH--------
Confidence 46667753 33 455555665443322 2246777899999999999998863211110 01111
Q ss_pred chhHHHHHHHHHHcCCCcC--CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---------ccchhhhhhc
Q 008274 414 AEDQLTGAEWLIKQGLAKV--GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---------YDTFYTEKYM 482 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~--~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~ 482 (571)
...+..+++.+.++...+. -++.=+|||+|+-+-+.+.+.++..-++-++++ +-+... ........+.
T Consensus 69 ~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS-FNN~~a~~aIP~~~~l~~~l~~EF~ 147 (250)
T PF07082_consen 69 WERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS-FNNFPADEAIPLLEQLAPALRLEFT 147 (250)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe-cCChHHHhhCchHhhhccccccCcc
Confidence 2345566666766543332 267779999999999988876543212222221 111100 0000011111
Q ss_pred CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM 549 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~ 549 (571)
..|.+....... .-.....|+|.-.+|.. .++..+.+.|+++. ..++.+..|| .|.
T Consensus 148 PsP~ET~~li~~-------~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HL 204 (250)
T PF07082_consen 148 PSPEETRRLIRE-------SYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHL 204 (250)
T ss_pred CCHHHHHHHHHH-------hcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCC
Confidence 122211111110 01124678888888876 47888888888764 3456667775 886
No 255
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.09 E-value=0.28 Score=46.61 Aligned_cols=191 Identities=11% Similarity=0.010 Sum_probs=101.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec-cCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR-SQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r-~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
-++++|..+|+....-.. .+..+++....|||||++++..-++ ....-.|-++|++ ...+++-+-+..+--+
T Consensus 29 ~~~v~D~~~g~~~~~~~a------~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~-~~~~ri~E~~s~GIGP 101 (305)
T PF07433_consen 29 FALVFDCRTGQLLQRLWA------PPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA-RGYRRIGEFPSHGIGP 101 (305)
T ss_pred EEEEEEcCCCceeeEEcC------CCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc-CCcEEEeEecCCCcCh
Confidence 468899999887654332 3456678889999999976665444 3356689999999 3344454433222111
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEec-------CC---------ccEEEEEeCCCce-eec--eee--cCeEEEEEEEEe
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEK-------TG---------FRHLYLHDINGTC-LGP--ITE--GDWMVEQIVGVN 217 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~-------~g---------~~~l~~~~~~~~~-~~~--lT~--~~~~~~~~~~~s 217 (571)
..- .+.+|+ -+++.+- .| -..|-++|..+++ ..+ |.. ...++.... ++
T Consensus 102 Hel---------~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa-~~ 171 (305)
T PF07433_consen 102 HEL---------LLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLA-VD 171 (305)
T ss_pred hhE---------EEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEE-ec
Confidence 111 123444 3333221 12 2677777766665 344 322 233455554 88
Q ss_pred ecCcEEEEEEcCCCCce--eEEEEEEeCCCCCCCCCCCeEecCC-------Cc-eEEEEECCCCCEEEEEeeCCCCCCEE
Q 008274 218 EASGQVYFTGTLDGPLE--SHLYCAKLYPDWNHTLEAPVKLTNG-------KG-KHVAVLDHNMRNFVDFHDSLDSPPRI 287 (571)
Q Consensus 218 ~dg~~l~~~~~~~~~~~--~~l~~~~l~~~g~~~~~~~~~lt~~-------~g-~~~~~~s~~g~~~v~~~s~~~~p~~l 287 (571)
.+|..++-...+..+.+ --|+.... +. ..+.+... .+ ..++.++.+|..++.++- .-..+
T Consensus 172 ~~G~V~~a~Q~qg~~~~~~PLva~~~~---g~----~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsP---rGg~~ 241 (305)
T PF07433_consen 172 GDGTVAFAMQYQGDPGDAPPLVALHRR---GG----ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSP---RGGRV 241 (305)
T ss_pred CCCcEEEEEecCCCCCccCCeEEEEcC---CC----cceeccCChHHHHhhCCceEEEEEeCCCCEEEEECC---CCCEE
Confidence 88754444433322221 22333222 21 12222211 23 245688899988776542 23467
Q ss_pred EEEEcCCCcee
Q 008274 288 LLCSLQDGSLV 298 (571)
Q Consensus 288 ~~~~~~~~~~~ 298 (571)
.+++..+++-+
T Consensus 242 ~~~d~~tg~~~ 252 (305)
T PF07433_consen 242 AVWDAATGRLL 252 (305)
T ss_pred EEEECCCCCEe
Confidence 77787777643
No 256
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.08 E-value=0.16 Score=52.91 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=48.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+.+.+.++|||..+..-.- .+|.++|+...+.+.+.++
T Consensus 15 yr~Gnl~ft~dG~sviSPvG-------------------------------------Nrvsv~dLknN~S~Tl~~e---- 53 (893)
T KOG0291|consen 15 YRAGNLVFTKDGNSVISPVG-------------------------------------NRVSVFDLKNNKSYTLPLE---- 53 (893)
T ss_pred eecCcEEECCCCCEEEeccC-------------------------------------CEEEEEEccCCcceeEEee----
Confidence 45678899999998865211 2678999999888877664
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEecc
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRS 130 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~ 130 (571)
....+..++-||||.+++.+..++
T Consensus 54 ----~~~NI~~ialSp~g~lllavdE~g 77 (893)
T KOG0291|consen 54 ----TRYNITRIALSPDGTLLLAVDERG 77 (893)
T ss_pred ----cCCceEEEEeCCCceEEEEEcCCC
Confidence 567789999999999877776655
No 257
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=97.07 E-value=0.051 Score=50.57 Aligned_cols=157 Identities=15% Similarity=0.089 Sum_probs=76.0
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCC-CceEEEEEeecC-CeeeccCCcccCCCCCccCCCeEEEEEecCCc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~-g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~ 187 (571)
.-..+.|+||-+.++++..++ +...+|.++-.+ |.-..-....++ .+...+... -... ...+++-+++|-.. -
T Consensus 134 hpT~V~FapDc~s~vv~~~~g-~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~-~i~i--GiA~~~k~imsas~-d 208 (420)
T KOG2096|consen 134 HPTRVVFAPDCKSVVVSVKRG-NKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVD-IINI--GIAGNAKYIMSASL-D 208 (420)
T ss_pred CceEEEECCCcceEEEEEccC-CEEEEEEeeecccCCCCcccccccccccchhcccc-eEEE--eecCCceEEEEecC-C
Confidence 456689999999888887765 343455444332 211100000000 000000000 0000 01122223333222 3
Q ss_pred cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC----ceE
Q 008274 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK----GKH 263 (571)
Q Consensus 188 ~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~----g~~ 263 (571)
..|.++++.|....-+.......... .+||+|+.|...+-..+ ..+|.+-...+|. .....++-... +..
T Consensus 209 t~i~lw~lkGq~L~~idtnq~~n~~a-avSP~GRFia~~gFTpD---VkVwE~~f~kdG~--fqev~rvf~LkGH~saV~ 282 (420)
T KOG2096|consen 209 TKICLWDLKGQLLQSIDTNQSSNYDA-AVSPDGRFIAVSGFTPD---VKVWEPIFTKDGT--FQEVKRVFSLKGHQSAVL 282 (420)
T ss_pred CcEEEEecCCceeeeeccccccccce-eeCCCCcEEEEecCCCC---ceEEEEEeccCcc--hhhhhhhheeccchhhee
Confidence 45888888876555554333333344 48999998888775444 5566555523442 22333333222 345
Q ss_pred EEEECCCCCEEEEE
Q 008274 264 VAVLDHNMRNFVDF 277 (571)
Q Consensus 264 ~~~~s~~g~~~v~~ 277 (571)
...||++++.++-+
T Consensus 283 ~~aFsn~S~r~vtv 296 (420)
T KOG2096|consen 283 AAAFSNSSTRAVTV 296 (420)
T ss_pred eeeeCCCcceeEEE
Confidence 56888888776554
No 258
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.05 E-value=0.0036 Score=64.22 Aligned_cols=142 Identities=13% Similarity=0.072 Sum_probs=76.0
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc---c-c--------chhhhHHHHhCCcEEEEEC
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI---N-T--------VDMRAQYLRSKGILVWKLD 390 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~-~--------~~~~~~~l~~~G~~v~~~d 390 (571)
.+....+..+..|.+...+ .++..|+||++.|||+.+.....|. + . .......+. +-..++.+|
T Consensus 17 ~~~~~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~iD 92 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFID 92 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE-
T ss_pred ecCCCCCcEEEEEEEEeCC---CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc-cccceEEEe
Confidence 3333356778888776654 2367799999999999865322111 0 0 000011122 236788899
Q ss_pred CC-CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc----C------CCee
Q 008274 391 NR-GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR----F------PDVF 458 (571)
Q Consensus 391 ~r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~----~------~~~~ 458 (571)
.| |.|.|-...... ....-....+|+..+++.+..+ +.....++.|.|.||||..+-.++.. . +-.+
T Consensus 93 ~PvGtGfS~~~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSD-YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp -STTSTT-EESSGGG-GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred ecCceEEeecccccc-ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 65 666542211111 0000011245666666655443 55566799999999999987655532 2 2348
Q ss_pred EEEEEcCccCC
Q 008274 459 QCAVSGAPVTS 469 (571)
Q Consensus 459 ~~~v~~~~~~~ 469 (571)
++++.++|+++
T Consensus 172 kGi~IGng~~d 182 (415)
T PF00450_consen 172 KGIAIGNGWID 182 (415)
T ss_dssp EEEEEESE-SB
T ss_pred ccceecCcccc
Confidence 89999999876
No 259
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.04 E-value=0.019 Score=55.12 Aligned_cols=157 Identities=11% Similarity=0.036 Sum_probs=87.7
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCC--ceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG--QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g--~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
..-+-...||++||++|..+.... .-||.+..++- -.+++..+..+ .... .|+||. ++....-
T Consensus 224 tdEVWfl~FS~nGkyLAsaSkD~T--aiiw~v~~d~~~kl~~tlvgh~~~--------V~yi----~wSPDdryLlaCg~ 289 (519)
T KOG0293|consen 224 TDEVWFLQFSHNGKYLASASKDST--AIIWIVVYDVHFKLKKTLVGHSQP--------VSYI----MWSPDDRYLLACGF 289 (519)
T ss_pred CCcEEEEEEcCCCeeEeeccCCce--EEEEEEecCcceeeeeeeecccCc--------eEEE----EECCCCCeEEecCc
Confidence 344556799999999998876543 34566655543 11222221111 0011 356665 4333211
Q ss_pred CCccEEEEEeCCCceeeceee-c-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec--CCC
Q 008274 185 TGFRHLYLHDINGTCLGPITE-G-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT--NGK 260 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt--~~~ 260 (571)
+ .-+.+.|.+++..+.+-. + .+.+.+.. |-|||..++.-+. .++++-.++ +|.. ...-- ..+
T Consensus 290 ~--e~~~lwDv~tgd~~~~y~~~~~~S~~sc~-W~pDg~~~V~Gs~-----dr~i~~wdl--Dgn~----~~~W~gvr~~ 355 (519)
T KOG0293|consen 290 D--EVLSLWDVDTGDLRHLYPSGLGFSVSSCA-WCPDGFRFVTGSP-----DRTIIMWDL--DGNI----LGNWEGVRDP 355 (519)
T ss_pred h--HheeeccCCcchhhhhcccCcCCCcceeE-EccCCceeEecCC-----CCcEEEecC--Ccch----hhcccccccc
Confidence 1 127788888887655433 3 35566664 9999987544332 277888888 6641 11110 012
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
..+..++++||++++.++.. +.+.+++..+..
T Consensus 356 ~v~dlait~Dgk~vl~v~~d----~~i~l~~~e~~~ 387 (519)
T KOG0293|consen 356 KVHDLAITYDGKYVLLVTVD----KKIRLYNREARV 387 (519)
T ss_pred eeEEEEEcCCCcEEEEEecc----cceeeechhhhh
Confidence 35667899999999888743 366666654433
No 260
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=97.04 E-value=0.21 Score=45.08 Aligned_cols=179 Identities=11% Similarity=0.060 Sum_probs=92.2
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCeeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~~~ 160 (571)
+.+||+..-...++ ......+..+.--|...-++...+.. .|.+-|+.+..+.. |..+.+. .
T Consensus 107 ~kIWdlR~~~~qR~---------~~~~spVn~vvlhpnQteLis~dqsg----~irvWDl~~~~c~~~liPe~~~-~--- 169 (311)
T KOG0315|consen 107 VKIWDLRSLSCQRN---------YQHNSPVNTVVLHPNQTELISGDQSG----NIRVWDLGENSCTHELIPEDDT-S--- 169 (311)
T ss_pred EEEEeccCcccchh---------ccCCCCcceEEecCCcceEEeecCCC----cEEEEEccCCccccccCCCCCc-c---
Confidence 45677766332222 22334555667777766544433222 37777888765543 3222211 1
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCc----eeeceeec---CeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGT----CLGPITEG---DWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~----~~~~lT~~---~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
.+.+ .-.+|+ .+...+..| +.|..++-++ +.+++++- ......+. +|||+++|...+.+..
T Consensus 170 ---i~sl----~v~~dgsml~a~nnkG--~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~-lSPd~k~lat~ssdkt- 238 (311)
T KOG0315|consen 170 ---IQSL----TVMPDGSMLAAANNKG--NCYVWRLLNHQTASELEPVHKFQAHNGHILRCL-LSPDVKYLATCSSDKT- 238 (311)
T ss_pred ---eeeE----EEcCCCcEEEEecCCc--cEEEEEccCCCccccceEhhheecccceEEEEE-ECCCCcEEEeecCCce-
Confidence 1111 113444 554455555 3555543332 24455542 22334454 8999999988877653
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEecCCCce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKLTNGKGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
..|+..+- . - .-..+|+..+++ -.+.||.||.|++- .++.. -+.++ ++..+++++.
T Consensus 239 --v~iwn~~~--~-~---kle~~l~gh~rWvWdc~FS~dg~YlvT-assd~-~~rlW--~~~~~k~v~q 295 (311)
T KOG0315|consen 239 --VKIWNTDD--F-F---KLELVLTGHQRWVWDCAFSADGEYLVT-ASSDH-TARLW--DLSAGKEVRQ 295 (311)
T ss_pred --EEEEecCC--c-e---eeEEEeecCCceEEeeeeccCccEEEe-cCCCC-ceeec--ccccCceeee
Confidence 56665442 1 0 124456655543 35699999987754 44432 22343 5556665543
No 261
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=97.03 E-value=0.048 Score=54.03 Aligned_cols=170 Identities=10% Similarity=-0.008 Sum_probs=79.1
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCcccCCCCCccCCCe-EEEEEecCCccE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRH 189 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~ 189 (571)
....|-|+.+-.++....+. ..+||-++-...+.+.|.....+ .=++ -..| .|++|+ ++.....+|--+
T Consensus 272 t~g~whP~~k~~FlT~s~Dg-tlRiWdv~~~k~q~qVik~k~~~g~Rv~----~tsC----~~nrdg~~iAagc~DGSIQ 342 (641)
T KOG0772|consen 272 TCGCWHPDNKEEFLTCSYDG-TLRIWDVNNTKSQLQVIKTKPAGGKRVP----VTSC----AWNRDGKLIAAGCLDGSIQ 342 (641)
T ss_pred eccccccCcccceEEecCCC-cEEEEecCCchhheeEEeeccCCCcccC----ceee----ecCCCcchhhhcccCCcee
Confidence 34579999885555444442 34566665544444443221111 0000 0111 355665 444445566555
Q ss_pred EEEEeCCCceeeceee----cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEE
Q 008274 190 LYLHDINGTCLGPITE----GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVA 265 (571)
Q Consensus 190 l~~~~~~~~~~~~lT~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~ 265 (571)
+|-...-+..+...-+ +.-++..+ .||+||++|.-.+.++. ..+|-+.- -. ..+..-.-|...--...+
T Consensus 343 ~W~~~~~~v~p~~~vk~AH~~g~~Itsi-~FS~dg~~LlSRg~D~t---LKvWDLrq--~k-kpL~~~tgL~t~~~~tdc 415 (641)
T KOG0772|consen 343 IWDKGSRTVRPVMKVKDAHLPGQDITSI-SFSYDGNYLLSRGFDDT---LKVWDLRQ--FK-KPLNVRTGLPTPFPGTDC 415 (641)
T ss_pred eeecCCcccccceEeeeccCCCCceeEE-EeccccchhhhccCCCc---eeeeeccc--cc-cchhhhcCCCccCCCCcc
Confidence 6654211111111111 11134444 49999998876655443 44443321 11 011011111111112356
Q ss_pred EECCCCCEEEEEeeCC--CCCCEEEEEEcCCCce
Q 008274 266 VLDHNMRNFVDFHDSL--DSPPRILLCSLQDGSL 297 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~--~~p~~l~~~~~~~~~~ 297 (571)
.|||+.+.++.-.+.+ .+++.|+.++..+-..
T Consensus 416 ~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~ 449 (641)
T KOG0772|consen 416 CFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDT 449 (641)
T ss_pred ccCCCceEEEecccccCCCCCceEEEEeccceee
Confidence 8999987655444433 4556788877654443
No 262
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.92 E-value=0.23 Score=47.74 Aligned_cols=118 Identities=15% Similarity=0.272 Sum_probs=67.9
Q ss_pred CCeEEEEEecCCccEEEEEeCCCceee------ceee----cCeEEE--EEEEEeecCcEEEEEEcC------CCCceeE
Q 008274 175 SGGFIWASEKTGFRHLYLHDINGTCLG------PITE----GDWMVE--QIVGVNEASGQVYFTGTL------DGPLESH 236 (571)
Q Consensus 175 ~d~~~~~s~~~g~~~l~~~~~~~~~~~------~lT~----~~~~~~--~~~~~s~dg~~l~~~~~~------~~~~~~~ 236 (571)
.+.++|.|-. .++|..++.+...+ .+|. ..|... +...+++..+.||+.... +.| -..
T Consensus 195 ~~~~~F~Sy~---G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdp-gte 270 (342)
T PF06433_consen 195 GGRLYFVSYE---GNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDP-GTE 270 (342)
T ss_dssp TTEEEEEBTT---SEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS--EEE
T ss_pred CCeEEEEecC---CEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCC-ceE
Confidence 3457776533 36788887665432 2231 244432 234577888899988763 122 588
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
||.+|+. ..+ ...++.-.....+..+|.|.+=++|..+... ..|+++|..+|+.++.+..
T Consensus 271 VWv~D~~--t~k---rv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~--~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 271 VWVYDLK--THK---RVARIPLEHPIDSIAVSQDDKPLLYALSAGD--GTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEETT--TTE---EEEEEEEEEEESEEEEESSSS-EEEEEETTT--TEEEEEETTT--EEEEE--
T ss_pred EEEEECC--CCe---EEEEEeCCCccceEEEccCCCcEEEEEcCCC--CeEEEEeCcCCcEEeehhc
Confidence 9999983 321 4455543222335678888887777655432 4899999999988776543
No 263
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.91 E-value=0.0012 Score=64.91 Aligned_cols=127 Identities=20% Similarity=0.252 Sum_probs=80.1
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhh---hHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLK---FEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~---~~~~~~~ 407 (571)
|..-+|.|.- .+.+.-|+|+++||+.-... .+.. -|+ .+.|+. ...+|+.++||-. ..|-- .....++
T Consensus 121 LYlNVW~P~~---~p~n~tVlVWiyGGGF~sGt-~SLd-vYd--Gk~la~~envIvVs~NYRvG-~FGFL~l~~~~eaPG 192 (601)
T KOG4389|consen 121 LYLNVWAPAA---DPYNLTVLVWIYGGGFYSGT-PSLD-VYD--GKFLAAVENVIVVSMNYRVG-AFGFLYLPGHPEAPG 192 (601)
T ss_pred eEEEEeccCC---CCCCceEEEEEEcCccccCC-ccee-eec--cceeeeeccEEEEEeeeeec-cceEEecCCCCCCCC
Confidence 6666788841 11345599999998654331 1111 111 455654 5678999999932 12211 1222333
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCC--CeeEEEEEcCccCC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFP--DVFQCAVSGAPVTS 469 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~--~~~~~~v~~~~~~~ 469 (571)
++ .+-|..-|++|+.+. ..-|+++|.++|.|+|+.-+.+-+..-+ .+|+-+|+.+|-.+
T Consensus 193 Nm---Gl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 193 NM---GLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred cc---chHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 43 478899999999886 3358999999999999987765554322 36888888776554
No 264
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=96.89 E-value=0.14 Score=51.38 Aligned_cols=234 Identities=15% Similarity=0.084 Sum_probs=114.6
Q ss_pred cCCCceEEECCCCCeEEEEEEeCC---CCCeEEEeec-----CCCC--CCCCCcccccCCCCCCCCceEEEEEEECCCCc
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSS---EIPRFRIMHQ-----GKSS--VGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 91 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~---~~~~~~~~~~-----~~~~--~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~ 91 (571)
+....-+.||-|+|++|-+..+.- ..+.+...+. .+.. .+.|...-+.|=.+-+.|....+.++.+-+++
T Consensus 305 ~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~ 384 (698)
T KOG2314|consen 305 YLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR 384 (698)
T ss_pred ccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc
Confidence 344566789999999998664321 1122222110 0000 02233333444444444444445555555544
Q ss_pred eEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCc--------cEEEEEEECCCCceEEEEEeecCCeeeccCC
Q 008274 92 VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT--------KLKVLKFDIKTGQRKVILVEELDSWVNLHDC 163 (571)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~--------~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~ 163 (571)
..+.. .-..-..+..-|-..|++|++-..|... +.+||+++-+.=....+- ..+ +.
T Consensus 385 ~iRt~--------nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve-lke-------~v 448 (698)
T KOG2314|consen 385 EIRTK--------NLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE-LKE-------SV 448 (698)
T ss_pred eeeec--------cceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeee-cch-------he
Confidence 32210 0123345667899999988877666431 446777766543332221 111 11
Q ss_pred cccCCCCCccCCCeEEEEEecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 164 FTPLDKGVTKYSGGFIWASEKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 164 ~~~~~~~~~~~~d~~~~~s~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
+.+.+. ..+|+|..++-.+-- -..|.+...+++++.+-.-+-....-+.|+|.|+.++..+-... ...|+-++
T Consensus 449 i~FaWE---P~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~--~g~l~F~D 523 (698)
T KOG2314|consen 449 IAFAWE---PHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSR--RGDLEFYD 523 (698)
T ss_pred eeeeec---cCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEeccc--ccceEEEe
Confidence 122110 134557777655433 33455554455544443322222223359999998888775432 24455555
Q ss_pred eCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeC
Q 008274 242 LYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 242 l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
. +-.. .+......-.+.....+.|.|+|++...++
T Consensus 524 ~--~~a~--~k~~~~~eh~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 524 T--DYAD--LKDTASPEHFAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred c--chhh--hhhccCccccccccceECCCCCEEEEeeeh
Confidence 5 2110 011111111233455899999988765544
No 265
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.89 E-value=0.28 Score=48.16 Aligned_cols=114 Identities=15% Similarity=0.244 Sum_probs=60.7
Q ss_pred EEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEE------e-ecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 113 RVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV------E-ELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 113 ~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~------~-~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.|.+++ ||+.++.... ..|+.+|+.+.+...+.. . ...+|.+.+ ++++ ..++++ +++.+
T Consensus 198 rP~~~~~dg~~~~vs~e-----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g--~q~i----a~~~dg~~lyV~~ 266 (352)
T TIGR02658 198 HPAYSNKSGRLVWPTYT-----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGG--WQQV----AYHRARDRIYLLA 266 (352)
T ss_pred CCceEcCCCcEEEEecC-----CeEEEEecCCCcceecceeeeccccccccccCCCc--ceeE----EEcCCCCEEEEEe
Confidence 344566 8865554433 249999976655433211 1 112454332 1111 233343 44434
Q ss_pred ec-------CCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 183 EK-------TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 183 ~~-------~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.. .+-.+|+.+|..+++. ..+.-+. ....+. +|+|++.++|.++... ..|..+|+
T Consensus 267 ~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~-~~~~ia-vS~Dgkp~lyvtn~~s---~~VsViD~ 329 (352)
T TIGR02658 267 DQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH-EIDSIN-VSQDAKPLLYALSTGD---KTLYIFDA 329 (352)
T ss_pred cCCccccccCCCCEEEEEECCCCeEEEEEeCCC-ceeeEE-ECCCCCeEEEEeCCCC---CcEEEEEC
Confidence 32 2347999999887764 4444444 445554 9999995555555433 23556665
No 266
>PTZ00421 coronin; Provisional
Probab=96.86 E-value=0.11 Score=53.94 Aligned_cols=54 Identities=13% Similarity=0.212 Sum_probs=38.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
.|.+||+.+++.... + ......+..+.|+|||+.++...... .|.+.|+.+++.
T Consensus 149 tVrIWDl~tg~~~~~-l-------~~h~~~V~sla~spdG~lLatgs~Dg----~IrIwD~rsg~~ 202 (493)
T PTZ00421 149 VVNVWDVERGKAVEV-I-------KCHSDQITSLEWNLDGSLLCTTSKDK----KLNIIDPRDGTI 202 (493)
T ss_pred EEEEEECCCCeEEEE-E-------cCCCCceEEEEEECCCCEEEEecCCC----EEEEEECCCCcE
Confidence 478899998865432 2 12345688899999999777654332 388889998875
No 267
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.85 E-value=0.36 Score=45.50 Aligned_cols=173 Identities=13% Similarity=0.029 Sum_probs=90.2
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC-c
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG-F 187 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g-~ 187 (571)
.....+++|+||+.++++. .......|+.....+.....+ .. . ..-.| +|++++.+|...+.. -
T Consensus 24 ~~~~s~AvS~dg~~~A~v~-~~~~~~~L~~~~~~~~~~~~~-~g--~------~l~~P-----S~d~~g~~W~v~~~~~~ 88 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVS-EGDGGRSLYVGPAGGPVRPVL-TG--G------SLTRP-----SWDPDGWVWTVDDGSGG 88 (253)
T ss_pred ccccceEECCCCCeEEEEE-EcCCCCEEEEEcCCCcceeec-cC--C------ccccc-----cccCCCCEEEEEcCCCc
Confidence 3677899999999888887 222344688887665433333 11 0 00112 567777666655522 2
Q ss_pred cEEEEEeCCCcee--eceeecCe--EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCC-CCCCCCCeEecCC--C
Q 008274 188 RHLYLHDINGTCL--GPITEGDW--MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW-NHTLEAPVKLTNG--K 260 (571)
Q Consensus 188 ~~l~~~~~~~~~~--~~lT~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g-~~~~~~~~~lt~~--~ 260 (571)
..+++ +...++. ..+.-... .+..+ .+|+||..+.+.....+.....+..+.-+.+| +..+..+.++... .
T Consensus 89 ~~~~~-~~~~g~~~~~~v~~~~~~~~I~~l-~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~ 166 (253)
T PF10647_consen 89 VRVVR-DSASGTGEPVEVDWPGLRGRITAL-RVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLS 166 (253)
T ss_pred eEEEE-ecCCCcceeEEecccccCCceEEE-EECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccC
Confidence 23333 2222222 22222211 45666 49999999999997665534445444442233 1122233333322 2
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
....+.|+++++.++.. .....+... .+.. +|.....+
T Consensus 167 ~v~~v~W~~~~~L~V~~-~~~~~~~~~-~v~~-dG~~~~~l 204 (253)
T PF10647_consen 167 DVTDVAWSDDSTLVVLG-RSAGGPVVR-LVSV-DGGPSTPL 204 (253)
T ss_pred cceeeeecCCCEEEEEe-CCCCCceeE-EEEc-cCCccccc
Confidence 23456889888655554 444444333 3343 44433444
No 268
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=96.85 E-value=0.0055 Score=65.60 Aligned_cols=112 Identities=9% Similarity=0.121 Sum_probs=68.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC--ccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~--~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.|.+.|.++...+.+.+. ....+..|.|||||+.++++..-.. ....||+.|+.+.....+--..+..-+
T Consensus 330 ~L~~~D~dG~n~~~ve~~--------~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aai 401 (912)
T TIGR02171 330 NLAYIDYTKGASRAVEIE--------DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAI 401 (912)
T ss_pred eEEEEecCCCCceEEEec--------CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccc
Confidence 789999999888877443 4556778999999999999555544 567899999997544322211122111
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecCC------c--cEEEEEeCCC---ceeeceeecCe
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKTG------F--RHLYLHDING---TCLGPITEGDW 208 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~g------~--~~l~~~~~~~---~~~~~lT~~~~ 208 (571)
|+|+-.. ++|. |+++++-.. | ..-|.+.... |+++.|=.|.+
T Consensus 402 ---prwrv~e-----~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gkfg~p~kl~dga~ 455 (912)
T TIGR02171 402 ---PRWRVLE-----NGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGKFGTPKKLFDGAY 455 (912)
T ss_pred ---cceEecC-----CCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCCCCCchhhhcccc
Confidence 3344432 4566 666654311 2 3345555433 34566655554
No 269
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.81 E-value=0.0022 Score=40.50 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=25.2
Q ss_pred eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 201 GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 201 ~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
+++|........+ .|||||++|+|++++.+....+||.
T Consensus 2 ~~~t~~~~~~~~p-~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 2 KQLTNSPGDDGSP-AWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEES-SSSSEEEE-EE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cCcccCCccccCE-EEecCCCEEEEEecCCCCCCcCEEC
Confidence 4677665544555 4999999999999988333477774
No 270
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.81 E-value=0.029 Score=50.88 Aligned_cols=211 Identities=15% Similarity=0.097 Sum_probs=107.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC--hhhhHHHHhccC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR--GLKFEASIKHNC 409 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~--~~~~~~~~~~~~ 409 (571)
.+...+.|. |..|+-+++-|-+.... ..+ ..+..-+..+|++.+.+.-+-.|.+ ...+...+.-
T Consensus 102 A~~~~liPQ------K~~~KOG~~a~tgdh~y-----~rr-~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~-- 167 (371)
T KOG1551|consen 102 ARVAWLIPQ------KMADLCLSWALTGDHVY-----TRR-LVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEY-- 167 (371)
T ss_pred eeeeeeccc------CcCCeeEEEeecCCcee-----Eee-eeecCchhhhcchheeeecccccccCCHHHHHHHHHH--
Confidence 445556662 45577777765222211 112 1234566788888888876644332 2222211110
Q ss_pred CCCCchhHHHHHHHHHHc-----C---CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhh
Q 008274 410 GRIDAEDQLTGAEWLIKQ-----G---LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~-----~---~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 481 (571)
+.|+...-++++++ . ...-.+.+|.|-||||.+|..+...++.- |+..|+.++......+.+..
T Consensus 168 ----vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P----va~~p~l~~~~asvs~teg~ 239 (371)
T KOG1551|consen 168 ----VTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP----VATAPCLNSSKASVSATEGL 239 (371)
T ss_pred ----HHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC----ccccccccccccchhhhhhh
Confidence 23332222222221 1 11236899999999999999998877654 34555555543222222111
Q ss_pred c-----------CCC------CCCh-hhhc--------------------cCCcchhhccCCCc-----EEEEecCCCCC
Q 008274 482 M-----------GLP------SEDP-VGYE--------------------YSSVMHHVHKMKGK-----LLLVHGMIDEN 518 (571)
Q Consensus 482 ~-----------g~~------~~~~-~~~~--------------------~~s~~~~~~~~~~p-----~lli~G~~D~~ 518 (571)
+ ..+ ..++ +.|. -.+-..++.++..| +.++.+++|..
T Consensus 240 l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Y 319 (371)
T KOG1551|consen 240 LLQDTSKMKRFNQTTNKSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAY 319 (371)
T ss_pred hhhhhHHHHhhccCcchhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCcc
Confidence 1 000 0000 0000 00112344454433 56677899999
Q ss_pred CChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 519 VHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 519 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+|......+-+.. ..+++...+ +||--...-....+.++|.+-|++
T Consensus 320 ipr~gv~~lQ~~W----Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 320 IPRTGVRSLQEIW----PGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred ccccCcHHHHHhC----CCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 9886665554444 556666666 699654444455666777776654
No 271
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=96.79 E-value=0.055 Score=58.31 Aligned_cols=209 Identities=17% Similarity=0.141 Sum_probs=114.3
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+..+|+|+.++|+...-..... ..+..+|+.|..+ ...+
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~d~~~--~~~~------- 56 (620)
T COG1506 13 ARVSDPRVSPPGGRLAYILTGLDFLKP---------------------------LYKSSLWVSDGKT--VRLL------- 56 (620)
T ss_pred hcccCcccCCCCceeEEeecccccccc---------------------------ccccceEEEeccc--cccc-------
Confidence 345677789999999998765111000 0113567766554 2122
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE--eecCCeeeccCCcccCCC-CCccCC----
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV--EELDSWVNLHDCFTPLDK-GVTKYS---- 175 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~--~~~~~w~~~~~~~~~~~~-~~~~~~---- 175 (571)
........+.|||||+.+++..+......++|+++.+ | ...... .....|.+.+........ ......
T Consensus 57 ---~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g-~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 131 (620)
T COG1506 57 ---TFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-G-LITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDH 131 (620)
T ss_pred ---ccCCcccccccCCCCCEEEEEeccCCCcceEEEEecC-C-ceeeeecccccceeCCCCCeEEEEecccccccCCcee
Confidence 2345666789999999999988566556789999988 4 111111 112234443322222100 001111
Q ss_pred ---CeE-EEEEecC-CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCC
Q 008274 176 ---GGF-IWASEKT-GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNH 248 (571)
Q Consensus 176 ---d~~-~~~s~~~-g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~ 248 (571)
+.+ ++...+. ...++|+++..+ ....++.+...+.... ++.+++.++...... .+.....+.... .++
T Consensus 132 ~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 206 (620)
T COG1506 132 LFVDRLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFA-TDGDGRLVASIRLDDDADPWVTNLYVLIE-GNG-- 206 (620)
T ss_pred eeecccceeecCCCCcccceEEEccCc-ccccccCCCCceeeee-eCCCCceeEEeeeccccCCceEeeEEEec-CCC--
Confidence 112 2222233 378899999876 5555665655555543 566666666666544 344444444332 122
Q ss_pred CCCCCeEecCCCce-EEEEECCCCCEEEEEeeC
Q 008274 249 TLEAPVKLTNGKGK-HVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 249 ~~~~~~~lt~~~g~-~~~~~s~~g~~~v~~~s~ 280 (571)
.+..++...+. ....+.++|+.+.+....
T Consensus 207 ---~~~~~~~~~~~~~~~~~~~~gk~~~~~~~~ 236 (620)
T COG1506 207 ---ELESLTPGEGSISKLAFDADGKSIALLGTE 236 (620)
T ss_pred ---ceEEEcCCCceeeeeeeCCCCCeeEEeccC
Confidence 56677766543 344788899876665543
No 272
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.76 E-value=0.014 Score=51.10 Aligned_cols=102 Identities=25% Similarity=0.263 Sum_probs=57.6
Q ss_pred CCceEEEEEcCCCCceeecccccc-----------cchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc-cCC-CCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWIN-----------TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH-NCG-RID 413 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~-----------~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~-~~~-~~~ 413 (571)
.+..++|++||.+-.+. .+|.. .--++.....+.||.|+..+.-. .+.|...... ..+ ...
T Consensus 99 ~~~kLlVLIHGSGvVrA--GQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~----~~kfye~k~np~kyirt~ 172 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRA--GQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNR----ERKFYEKKRNPQKYIRTP 172 (297)
T ss_pred CccceEEEEecCceEec--chHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCch----hhhhhhcccCcchhccch
Confidence 34568999999654332 23311 11233566678899999988641 1112111100 000 011
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
++.+.-...+++.. .....++++.||+||++++.++-++|+
T Consensus 173 veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 173 VEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred HHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCC
Confidence 22333333333332 256789999999999999999998875
No 273
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=96.75 E-value=0.13 Score=47.95 Aligned_cols=168 Identities=11% Similarity=0.093 Sum_probs=84.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~ 159 (571)
.+.+||+.|-..-++ +...-..+..++||+||++++..+... .|-..|+-.|.+ +++.- .++-|.-
T Consensus 46 ~vvI~D~~T~~iar~--------lsaH~~pi~sl~WS~dgr~LltsS~D~----si~lwDl~~gs~l~rirf-~spv~~~ 112 (405)
T KOG1273|consen 46 RVVIYDFDTFRIARM--------LSAHVRPITSLCWSRDGRKLLTSSRDW----SIKLWDLLKGSPLKRIRF-DSPVWGA 112 (405)
T ss_pred cEEEEEccccchhhh--------hhccccceeEEEecCCCCEeeeecCCc----eeEEEeccCCCceeEEEc-cCcccee
Confidence 467889887543322 133556788999999999877765333 488889988874 33322 2222321
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeec---CeEE-EEEEEEeecCcEEEEEEcCCCCcee
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG---DWMV-EQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~---~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
.|.| ...+.++..--+.. . ++++...++.+.|... +.+. .+...+++.|++||. ++..|. .
T Consensus 113 ---q~hp------~k~n~~va~~~~~s-p--~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIit-GtsKGk--l 177 (405)
T KOG1273|consen 113 ---QWHP------RKRNKCVATIMEES-P--VVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIIT-GTSKGK--L 177 (405)
T ss_pred ---eecc------ccCCeEEEEEecCC-c--EEEEecCCceeeccCCCccccccccccccccCCCCEEEE-ecCcce--E
Confidence 1111 11223333322222 2 2344333444445432 2111 111137777876654 455553 6
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCC
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSL 281 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~ 281 (571)
.+|.... - . ...--++|.....-...++-.|+.+++.++..
T Consensus 178 lv~~a~t--~-e--~vas~rits~~~IK~I~~s~~g~~liiNtsDR 218 (405)
T KOG1273|consen 178 LVYDAET--L-E--CVASFRITSVQAIKQIIVSRKGRFLIINTSDR 218 (405)
T ss_pred EEEecch--h-e--eeeeeeechheeeeEEEEeccCcEEEEecCCc
Confidence 6665432 0 0 00111222211222346788899988877663
No 274
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.71 E-value=0.0074 Score=57.69 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=67.6
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCc--EEEEECCCCCC---CChhhhHHHHhccCCCCCchhHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI--LVWKLDNRGTA---RRGLKFEASIKHNCGRIDAEDQLTGAE 422 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~ 422 (571)
..-+++|+||. .+.|...-...++.....|+ +.+.+-.+..+ +|..+-.+.. ....++...++
T Consensus 115 ~k~vlvFvHGf------Nntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~------~Sr~aLe~~lr 182 (377)
T COG4782 115 AKTVLVFVHGF------NNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTN------YSRPALERLLR 182 (377)
T ss_pred CCeEEEEEccc------CCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhh------hhHHHHHHHHH
Confidence 34799999994 33444344445666666664 34444444222 2322222222 22577889999
Q ss_pred HHHHcCCCcCCcEEEEeechHHHHHHHHHhc----C----CCeeEEEEEcCccCCc
Q 008274 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLAR----F----PDVFQCAVSGAPVTSW 470 (571)
Q Consensus 423 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~----~----~~~~~~~v~~~~~~~~ 470 (571)
+|.+.. ...+|.|++||||.++++.++-+ . +..|+-+|..+|=.|.
T Consensus 183 ~La~~~--~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 183 YLATDK--PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred HHHhCC--CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 998875 35689999999999999876533 1 2346667777775553
No 275
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.67 E-value=0.18 Score=47.44 Aligned_cols=92 Identities=10% Similarity=0.052 Sum_probs=47.9
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECC---CCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK---TGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~---~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
.+..+.+||||.+++++..+... ..|++.-+. .|..+.+.....-.- . ..... ....|.++. +++.....
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~-~~v~va~V~r~~~g~~~~l~~~~~~~~-~---~~~~v-~~v~W~~~~~L~V~~~~~ 186 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGG-GRVYVAGVVRDGDGVPRRLTGPRRVAP-P---LLSDV-TDVAWSDDSTLVVLGRSA 186 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCC-CeEEEEEEEeCCCCCcceeccceEecc-c---ccCcc-eeeeecCCCEEEEEeCCC
Confidence 78889999999999988766543 346655443 332333322110000 0 00000 011455554 66665554
Q ss_pred CccEEEEEeCCCceeeceeecC
Q 008274 186 GFRHLYLHDINGTCLGPITEGD 207 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~ 207 (571)
+-.....+..+++..+.++...
T Consensus 187 ~~~~~~~v~~dG~~~~~l~~~~ 208 (253)
T PF10647_consen 187 GGPVVRLVSVDGGPSTPLPSVN 208 (253)
T ss_pred CCceeEEEEccCCcccccCCCC
Confidence 4322225667788777775544
No 276
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.58 E-value=0.5 Score=48.07 Aligned_cols=153 Identities=8% Similarity=-0.036 Sum_probs=84.2
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-eEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEe
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
......++...|++|+++++--- +++.+++.|..+-+ ...++++... ...+.++++ ..+++....
T Consensus 298 ~~H~qeVCgLkws~d~~~lASGg----nDN~~~Iwd~~~~~p~~~~~~H~aA-----VKA~awcP~-----q~~lLAsGG 363 (484)
T KOG0305|consen 298 QGHRQEVCGLKWSPDGNQLASGG----NDNVVFIWDGLSPEPKFTFTEHTAA-----VKALAWCPW-----QSGLLATGG 363 (484)
T ss_pred hcccceeeeeEECCCCCeeccCC----CccceEeccCCCccccEEEecccee-----eeEeeeCCC-----ccCceEEcC
Confidence 34567889999999998665432 33457777774433 2334443321 011222221 224555443
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-Cce
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGK 262 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~ 262 (571)
...-..|...+..+++..+--...-.|..+. |++..+.|..+..-.. .+..||+++- -. ....++.- .-.
T Consensus 364 Gs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~-Wsk~~kEi~sthG~s~-n~i~lw~~ps--~~-----~~~~l~gH~~RV 434 (484)
T KOG0305|consen 364 GSADRCIKFWNTNTGARIDSVDTGSQVCSLI-WSKKYKELLSTHGYSE-NQITLWKYPS--MK-----LVAELLGHTSRV 434 (484)
T ss_pred CCcccEEEEEEcCCCcEecccccCCceeeEE-EcCCCCEEEEecCCCC-CcEEEEeccc--cc-----eeeeecCCccee
Confidence 3335667777766665433322233567776 9999888877764322 1477887753 11 23333322 223
Q ss_pred EEEEECCCCCEEEEEeeC
Q 008274 263 HVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~ 280 (571)
...++||||..++.....
T Consensus 435 l~la~SPdg~~i~t~a~D 452 (484)
T KOG0305|consen 435 LYLALSPDGETIVTGAAD 452 (484)
T ss_pred EEEEECCCCCEEEEeccc
Confidence 445899999887665443
No 277
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.58 E-value=0.011 Score=55.11 Aligned_cols=100 Identities=18% Similarity=0.125 Sum_probs=61.3
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHH-HHHHHHHcC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT-GAEWLIKQG 428 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~ 428 (571)
|.|+++|+..+... .|..++..|... .-|+..+.||.+.....+ ..++|+.+ .++.+.+..
T Consensus 1 ~pLF~fhp~~G~~~-------~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~----------~~l~~~a~~yv~~Ir~~Q 62 (257)
T COG3319 1 PPLFCFHPAGGSVL-------AYAPLAAALGPL-LPVYGLQAPGYGAGEQPF----------ASLDDMAAAYVAAIRRVQ 62 (257)
T ss_pred CCEEEEcCCCCcHH-------HHHHHHHHhccC-ceeeccccCccccccccc----------CCHHHHHHHHHHHHHHhC
Confidence 56788999766532 344455566555 889999999876422211 11334333 233333321
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCccCC
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~~~~ 469 (571)
....+.+.|||+||.+|.-+|.+ ...-+.-.++......
T Consensus 63 --P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 63 --PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred --CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 34589999999999999988764 3445556666555444
No 278
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.57 E-value=0.008 Score=57.25 Aligned_cols=115 Identities=14% Similarity=0.104 Sum_probs=75.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhC---C------cEEEEECCCCCCCCh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK---G------ILVWKLDNRGTARRG 398 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~---G------~~v~~~d~rG~~~~~ 398 (571)
.|..++....+|+..+.+.+.+|+++ +||.|++-. +. .-++..|.+- | |.||+|..+|.|-+.
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl-~HGwPGsv~--EF-----ykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLL-LHGWPGSVR--EF-----YKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD 203 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEE-ecCCCchHH--HH-----HhhhhhhcCccccCCccceeEEEeccCCCCcccCc
Confidence 68889999999876544445667755 799999843 22 2235566543 3 789999999987554
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHH-HHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWL-IKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
..-. . | .....+..+++-| ... .-++..|-|.-+|..++..++..+|+.+.+
T Consensus 204 ~~sk----~--G-Fn~~a~ArvmrkLMlRL---g~nkffiqGgDwGSiI~snlasLyPenV~G 256 (469)
T KOG2565|consen 204 APSK----T--G-FNAAATARVMRKLMLRL---GYNKFFIQGGDWGSIIGSNLASLYPENVLG 256 (469)
T ss_pred CCcc----C--C-ccHHHHHHHHHHHHHHh---CcceeEeecCchHHHHHHHHHhhcchhhhH
Confidence 3211 0 1 0112222233322 232 347899999999999999999999997655
No 279
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.56 E-value=0.0073 Score=47.91 Aligned_cols=59 Identities=8% Similarity=0.126 Sum_probs=48.1
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
..|+|++.++.|...|.+.++.+.+.|. ..+++..++.||+... ....=..+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~----~s~lvt~~g~gHg~~~-~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP----GSRLVTVDGAGHGVYA-GGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC----CceEEEEeccCcceec-CCChHHHHHHHHHHH
Confidence 4799999999999999999999999873 3689999999999753 334455677778875
No 280
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.46 E-value=0.0079 Score=55.09 Aligned_cols=74 Identities=22% Similarity=0.199 Sum_probs=44.1
Q ss_pred CCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC----CCeeEEEEEcCc
Q 008274 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAP 466 (571)
Q Consensus 392 rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~----~~~~~~~v~~~~ 466 (571)
||+..+...|.......+. ........|++|+.+.-.-.+..+.+.|||.||.+|..+++.. .+++..+.+..+
T Consensus 44 RGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 44 RGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred ECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 5554444444433322221 1234456677777654111234699999999999999998873 346777776554
No 281
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.40 E-value=0.019 Score=58.15 Aligned_cols=138 Identities=12% Similarity=0.116 Sum_probs=74.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
..|.+||+.+++.+.- +.+....+..++|||||++++.+.... .|.+++...++. .|.+.... ..
T Consensus 700 ~Ti~lWDl~~~~~~~~--------l~gHtdqIf~~AWSpdGr~~AtVcKDg----~~rVy~Prs~e~-pv~Eg~gp--vg 764 (1012)
T KOG1445|consen 700 STIELWDLANAKLYSR--------LVGHTDQIFGIAWSPDGRRIATVCKDG----TLRVYEPRSREQ-PVYEGKGP--VG 764 (1012)
T ss_pred ceeeeeehhhhhhhhe--------eccCcCceeEEEECCCCcceeeeecCc----eEEEeCCCCCCC-ccccCCCC--cc
Confidence 4577889998765422 234567888999999999999887655 388888888764 34443221 00
Q ss_pred ccCCcccCCCCCccCCCe-EEEEE--ecCCccEEEEEeCCCceeeceeecCeEE---EEEEEEeecCcEEEEEEcCCCCc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWAS--EKTGFRHLYLHDINGTCLGPITEGDWMV---EQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s--~~~g~~~l~~~~~~~~~~~~lT~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
.+ ... .-|.-|+ +++.+ ++..-++|-+|++..-..+.|-....++ .-++.+++|.+.|+.++-.+.
T Consensus 765 --tR--gAR--i~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~-- 836 (1012)
T KOG1445|consen 765 --TR--GAR--ILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDR-- 836 (1012)
T ss_pred --Cc--cee--EEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCc--
Confidence 00 000 0122222 33332 2222356666665443333332211122 123357888888877764332
Q ss_pred eeEEEEE
Q 008274 234 ESHLYCA 240 (571)
Q Consensus 234 ~~~l~~~ 240 (571)
...+|.+
T Consensus 837 ~v~~yEv 843 (1012)
T KOG1445|consen 837 FVNMYEV 843 (1012)
T ss_pred eEEEEEe
Confidence 3445544
No 282
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.39 E-value=0.84 Score=42.53 Aligned_cols=199 Identities=12% Similarity=0.087 Sum_probs=91.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
.+++.|.||.++|+.+ .+... .|+.+++++.-.+.+.+.
T Consensus 24 ~SGLTy~pd~~tLfaV-~d~~~----------------------------------~i~els~~G~vlr~i~l~------ 62 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAV-QDEPG----------------------------------EIYELSLDGKVLRRIPLD------ 62 (248)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT----------------------------------EEEEEETT--EEEEEE-S------
T ss_pred ccccEEcCCCCeEEEE-ECCCC----------------------------------EEEEEcCCCCEEEEEeCC------
Confidence 5899999999998554 44322 467788876656666653
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEEC--CCCceE--EEEEeecCCee-eccCCcccCCCCCccCC--Ce
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI--KTGQRK--VILVEELDSWV-NLHDCFTPLDKGVTKYS--GG 177 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~--~~g~~~--~l~~~~~~~w~-~~~~~~~~~~~~~~~~~--d~ 177 (571)
+.+-...+++..+|+ ++....|.+ .|+.+++ .+.... ...+-. -++. ..-..|-. ++|++ ++
T Consensus 63 --g~~D~EgI~y~g~~~-~vl~~Er~~---~L~~~~~~~~~~~~~~~~~~~~~-l~~~~~~N~G~EG----la~D~~~~~ 131 (248)
T PF06977_consen 63 --GFGDYEGITYLGNGR-YVLSEERDQ---RLYIFTIDDDTTSLDRADVQKIS-LGFPNKGNKGFEG----LAYDPKTNR 131 (248)
T ss_dssp --S-SSEEEEEE-STTE-EEEEETTTT---EEEEEEE----TT--EEEEEEEE----S---SS--EE----EEEETTTTE
T ss_pred --CCCCceeEEEECCCE-EEEEEcCCC---cEEEEEEeccccccchhhceEEe-cccccCCCcceEE----EEEcCCCCE
Confidence 344566789998885 445556664 3665555 333321 111111 0000 00011111 23444 34
Q ss_pred EEEEEecCCccEEEEEeC--CCceee-----ceeecC---eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 178 FIWASEKTGFRHLYLHDI--NGTCLG-----PITEGD---WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~--~~~~~~-----~lT~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
+++.-++ ....||.++. .+.... .+.... .+..++ .++|..+.||+.+... +.|..++. +|.
T Consensus 132 L~v~kE~-~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l-~~~p~t~~lliLS~es----~~l~~~d~--~G~ 203 (248)
T PF06977_consen 132 LFVAKER-KPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGL-SYDPRTGHLLILSDES----RLLLELDR--QGR 203 (248)
T ss_dssp EEEEEES-SSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EE-EEETTTTEEEEEETTT----TEEEEE-T--T--
T ss_pred EEEEeCC-CChhhEEEccccCccceeeccccccccccceeccccce-EEcCCCCeEEEEECCC----CeEEEECC--CCC
Confidence 5554333 4566888875 221111 111111 223344 4788888999998754 33444443 332
Q ss_pred CCCCCCeEecCC--------CceEEEEECCCCCEEEEEeeCCCCCCEEEEE
Q 008274 248 HTLEAPVKLTNG--------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLC 290 (571)
Q Consensus 248 ~~~~~~~~lt~~--------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~ 290 (571)
. .....|..+ .....+++.++|+. |+.+. |..+|++
T Consensus 204 ~--~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~L--YIvsE---pNlfy~f 247 (248)
T PF06977_consen 204 V--VSSLSLDRGFHGLSKDIPQPEGIAFDPDGNL--YIVSE---PNLFYRF 247 (248)
T ss_dssp E--EEEEE-STTGGG-SS---SEEEEEE-TT--E--EEEET---TTEEEEE
T ss_pred E--EEEEEeCCcccCcccccCCccEEEECCCCCE--EEEcC---CceEEEe
Confidence 0 011222221 13456789999964 34444 5577765
No 283
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=96.36 E-value=0.0043 Score=61.42 Aligned_cols=70 Identities=16% Similarity=0.093 Sum_probs=47.7
Q ss_pred ecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCC
Q 008274 11 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG 90 (571)
Q Consensus 11 ~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~ 90 (571)
|=+.-|...| .....+.+||||++||.++.|. -|.++|.++-
T Consensus 281 NPv~~w~~~~--g~in~f~FS~DG~~LA~VSqDG------------------------------------fLRvF~fdt~ 322 (636)
T KOG2394|consen 281 NPVARWHIGE--GSINEFAFSPDGKYLATVSQDG------------------------------------FLRIFDFDTQ 322 (636)
T ss_pred CccceeEecc--ccccceeEcCCCceEEEEecCc------------------------------------eEEEeeccHH
Confidence 5566788777 3778899999999999987651 3577777765
Q ss_pred ceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEE
Q 008274 91 PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQV 126 (571)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~ 126 (571)
+..-+-- +. . +.+..++||||||+|+.=
T Consensus 323 eLlg~mk-----SY--F-GGLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 323 ELLGVMK-----SY--F-GGLLCVCWSPDGKYIVTG 350 (636)
T ss_pred HHHHHHH-----hh--c-cceEEEEEcCCccEEEec
Confidence 4332100 00 1 234568999999988764
No 284
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.35 E-value=0.092 Score=56.75 Aligned_cols=160 Identities=9% Similarity=-0.017 Sum_probs=80.7
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEEC------C--CCc--------eEEEEEeecCCeeeccCCcccCCC
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI------K--TGQ--------RKVILVEELDSWVNLHDCFTPLDK 169 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~------~--~g~--------~~~l~~~~~~~w~~~~~~~~~~~~ 169 (571)
.....+..+.|||||++++.-++.. ...||..+. - +|. +..+....+..-.+
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD~--~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~D---------- 134 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDDR--LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLD---------- 134 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCcc--eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccce----------
Confidence 3566788899999999888765442 334555552 0 111 11111111110111
Q ss_pred CCccCCCeEEEEEec-CCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 170 GVTKYSGGFIWASEK-TGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 170 ~~~~~~d~~~~~s~~-~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
..|++++.++.|.. +..-.| ++..+-+ .+.|-...--|.... |+|-|+++.-.+++.. ..+|+.. +.+
T Consensus 135 -v~Wsp~~~~lvS~s~DnsVii--wn~~tF~~~~vl~~H~s~VKGvs-~DP~Gky~ASqsdDrt---ikvwrt~---dw~ 204 (942)
T KOG0973|consen 135 -VNWSPDDSLLVSVSLDNSVII--WNAKTFELLKVLRGHQSLVKGVS-WDPIGKYFASQSDDRT---LKVWRTS---DWG 204 (942)
T ss_pred -eccCCCccEEEEecccceEEE--EccccceeeeeeecccccccceE-ECCccCeeeeecCCce---EEEEEcc---cce
Confidence 14677776555544 333333 3333322 233333333455664 9999987766665443 6677632 221
Q ss_pred CCCCCCeEecCC-------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEE
Q 008274 248 HTLEAPVKLTNG-------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCS 291 (571)
Q Consensus 248 ~~~~~~~~lt~~-------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~ 291 (571)
....+|.. .-....+|||||.+++-..+=-+.-+.+.+++
T Consensus 205 ----i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Iie 251 (942)
T KOG0973|consen 205 ----IEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIE 251 (942)
T ss_pred ----eeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEe
Confidence 22233321 11234599999999875443222224455544
No 285
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=96.26 E-value=0.16 Score=53.10 Aligned_cols=163 Identities=17% Similarity=0.109 Sum_probs=95.6
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCeEEEEEe
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
.+..+.+...+|+||.++++-++.... .+||. +++..+..+++.. .+.|-- ...|-|++|.|-
T Consensus 448 ~GH~GPVyg~sFsPd~rfLlScSED~s--vRLWs--l~t~s~~V~y~GH~~PVwdV------------~F~P~GyYFata 511 (707)
T KOG0263|consen 448 YGHSGPVYGCSFSPDRRFLLSCSEDSS--VRLWS--LDTWSCLVIYKGHLAPVWDV------------QFAPRGYYFATA 511 (707)
T ss_pred ecCCCceeeeeecccccceeeccCCcc--eeeee--cccceeEEEecCCCcceeeE------------EecCCceEEEec
Confidence 456778888999999998888876542 23554 4555555565532 223421 124557888764
Q ss_pred c-CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-
Q 008274 184 K-TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG- 261 (571)
Q Consensus 184 ~-~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g- 261 (571)
. ++...||..+- ..+.++-.+.....+++.|.|+..++.-- ..+. ..++|-+. .|. .++..+...+
T Consensus 512 s~D~tArLWs~d~--~~PlRifaghlsDV~cv~FHPNs~Y~aTG-SsD~--tVRlWDv~---~G~----~VRiF~GH~~~ 579 (707)
T KOG0263|consen 512 SHDQTARLWSTDH--NKPLRIFAGHLSDVDCVSFHPNSNYVATG-SSDR--TVRLWDVS---TGN----SVRIFTGHKGP 579 (707)
T ss_pred CCCceeeeeeccc--CCchhhhcccccccceEEECCcccccccC-CCCc--eEEEEEcC---CCc----EEEEecCCCCc
Confidence 3 55678888764 33344444433333445699988765544 2222 25555443 342 4555554344
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
.....+||+|++++-. ..-..|.+.|+..++.++
T Consensus 580 V~al~~Sp~Gr~LaSg----~ed~~I~iWDl~~~~~v~ 613 (707)
T KOG0263|consen 580 VTALAFSPCGRYLASG----DEDGLIKIWDLANGSLVK 613 (707)
T ss_pred eEEEEEcCCCceEeec----ccCCcEEEEEcCCCcchh
Confidence 3455899999987543 333477788886666443
No 286
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.17 E-value=0.0083 Score=58.01 Aligned_cols=116 Identities=17% Similarity=0.187 Sum_probs=73.2
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC---hhh-hHHHHhcc--CCCCCchhHHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR---GLK-FEASIKHN--CGRIDAEDQLTGAE 422 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~---~~~-~~~~~~~~--~~~~~~~D~~~~~~ 422 (571)
-|++++. |.-++- +.|....-.+.....+.+-.+|.+.+|-.|.+ |.. +..+.... ..+..+.|..+.+.
T Consensus 81 gPIffYt-GNEGdi---e~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYT-GNEGDI---EWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CceEEEe-CCcccH---HHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 4666654 543331 22322222234444578889999999965543 221 11111110 01224678888899
Q ss_pred HHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-cCccC
Q 008274 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS-GAPVT 468 (571)
Q Consensus 423 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~-~~~~~ 468 (571)
+|+.........|+++|.||||.++.++=.++|.++.++++ .+|+.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 99887555678899999999999999999999998766554 55654
No 287
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.08 E-value=0.02 Score=57.01 Aligned_cols=118 Identities=16% Similarity=0.168 Sum_probs=77.9
Q ss_pred CceEEEEEcCCCCceeecccccccc-hhhhHHHHhCCcEEEEECCCCCCCChh---hhHHHHhccCCCCCchhHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTV-DMRAQYLRSKGILVWKLDNRGTARRGL---KFEASIKHNCGRIDAEDQLTGAEW 423 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~rG~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~ 423 (571)
.-|+.|++-|.+.. ...|.... ..+..+..+.|-.|+...+|=.|.+-. .-...+..-.....+.|+.++|+.
T Consensus 85 ~gPiFLmIGGEgp~---~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPE---SDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCceEEEEcCCCCC---CCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 34888888663221 13453222 234667778999999999996553210 000001000011237888999998
Q ss_pred HHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 424 LIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 424 l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
+..+ +.-+..+.+.+|.||-|.+++++=..+|+++.++|+.+++.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 8876 45566799999999999999999999999988888766554
No 288
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=95.99 E-value=0.039 Score=55.96 Aligned_cols=86 Identities=19% Similarity=0.109 Sum_probs=52.4
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
-.-+++|||||+++|=+..|. .|.+|.-.+++. ++....
T Consensus 722 qIf~~AWSpdGr~~AtVcKDg------------------------------------~~rVy~Prs~e~-pv~Eg~---- 760 (1012)
T KOG1445|consen 722 QIFGIAWSPDGRRIATVCKDG------------------------------------TLRVYEPRSREQ-PVYEGK---- 760 (1012)
T ss_pred ceeEEEECCCCcceeeeecCc------------------------------------eEEEeCCCCCCC-ccccCC----
Confidence 345789999999999877652 234555444432 121110
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
..-...-..+.|.=||+.++.+--..+.+.+|..+|+++-..+.|..
T Consensus 761 -gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t 807 (1012)
T KOG1445|consen 761 -GPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYT 807 (1012)
T ss_pred -CCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCccee
Confidence 11123345688999999766654445556678888888765455543
No 289
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=95.98 E-value=1.4 Score=43.56 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=74.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe--EEEEEEeccC--ccEEEEEEECCCCceEEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI--LTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~i~~~~~r~~--~~~~i~~~d~~~g~~~~l~~~~~~~ 156 (571)
.|++|||++.+...+.... ...-...-.|.-+|+ -|+..++|.. +...||.+|.++|..+.+.....+.
T Consensus 79 GL~VYdL~Gk~lq~~~~Gr-------~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~~~~~p~ 151 (381)
T PF02333_consen 79 GLYVYDLDGKELQSLPVGR-------PNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVTDPAAPI 151 (381)
T ss_dssp EEEEEETTS-EEEEE-SS--------EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-CBTTC-E
T ss_pred CEEEEcCCCcEEEeecCCC-------cceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcCCCCccc
Confidence 5899999999887774320 111111112333566 3678888874 5568999999888766553211000
Q ss_pred eeeccCCcccCCCCCccC-CCe--EEEEEecCCccEEEEEeCC-Cc-----eeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 157 WVNLHDCFTPLDKGVTKY-SGG--FIWASEKTGFRHLYLHDIN-GT-----CLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~-~d~--~~~~s~~~g~~~l~~~~~~-~~-----~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
-.+....+..|- ..+ .++ +.|++.++|.-+.|.+..+ .+ ..+.+.-+. .++.++ .+....+||+.-
T Consensus 152 ~~~~~e~yGlcl---y~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~s-Q~EGCV-VDDe~g~LYvgE 226 (381)
T PF02333_consen 152 ATDLSEPYGLCL---YRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGS-QPEGCV-VDDETGRLYVGE 226 (381)
T ss_dssp E-SSSSEEEEEE---EE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS--EEEEE-EETTTTEEEEEE
T ss_pred ccccccceeeEE---eecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCC-cceEEE-EecccCCEEEec
Confidence 000000011111 111 222 5667778886666666532 22 234444433 566665 787778888863
Q ss_pred cCCCCceeEEEEEEeCCC
Q 008274 228 TLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~ 245 (571)
. + ..||++++..+
T Consensus 227 E--~---~GIW~y~Aep~ 239 (381)
T PF02333_consen 227 E--D---VGIWRYDAEPE 239 (381)
T ss_dssp T--T---TEEEEEESSCC
T ss_pred C--c---cEEEEEecCCC
Confidence 2 2 56788877433
No 290
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.96 E-value=0.012 Score=54.00 Aligned_cols=21 Identities=29% Similarity=0.593 Sum_probs=18.1
Q ss_pred CCcEEEEeechHHHHHHHHHh
Q 008274 432 VGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~ 452 (571)
..+|.++|||+||.++-.++.
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 368999999999999977765
No 291
>PLN00181 protein SPA1-RELATED; Provisional
Probab=95.96 E-value=2 Score=48.11 Aligned_cols=52 Identities=13% Similarity=0.110 Sum_probs=32.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEc-cCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws-pDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
.+.+||+.+++.... +. ....+..+.|+ ++|+.++...... .|+.+|+.++.
T Consensus 599 ~v~iWd~~~~~~~~~-~~--------~~~~v~~v~~~~~~g~~latgs~dg----~I~iwD~~~~~ 651 (793)
T PLN00181 599 SVKLWSINQGVSIGT-IK--------TKANICCVQFPSESGRSLAFGSADH----KVYYYDLRNPK 651 (793)
T ss_pred EEEEEECCCCcEEEE-Ee--------cCCCeEEEEEeCCCCCEEEEEeCCC----eEEEEECCCCC
Confidence 478889987754321 21 22345667885 5687777654332 48888988764
No 292
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.73 E-value=0.026 Score=55.54 Aligned_cols=101 Identities=16% Similarity=0.072 Sum_probs=61.1
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcE---EEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL---VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l 424 (571)
+.|+ +++||...... .+..+...+...|+. +..++.++...... ... ..+-+..-++..
T Consensus 59 ~~pi-vlVhG~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-------~~~ql~~~V~~~ 120 (336)
T COG1075 59 KEPI-VLVHGLGGGYG-------NFLPLDYRLAILGWLTNGVYAFELSGGDGTYS---LAV-------RGEQLFAYVDEV 120 (336)
T ss_pred CceE-EEEccCcCCcc-------hhhhhhhhhcchHHHhcccccccccccCCCcc---ccc-------cHHHHHHHHHHH
Confidence 4455 56899633322 233345557777887 88888775411110 000 012223333333
Q ss_pred HHcCCCcCCcEEEEeechHHHHHHHHHhcCC--CeeEEEEEcCccC
Q 008274 425 IKQGLAKVGHIGLYGWSYGGYLSAITLARFP--DVFQCAVSGAPVT 468 (571)
Q Consensus 425 ~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~--~~~~~~v~~~~~~ 468 (571)
.... ...++.++|||+||.++..++...+ .+++..+..++..
T Consensus 121 l~~~--ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 121 LAKT--GAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred Hhhc--CCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 3322 3478999999999999998888877 7888888877654
No 293
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=95.70 E-value=0.12 Score=48.46 Aligned_cols=36 Identities=8% Similarity=0.181 Sum_probs=22.9
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT 143 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~ 143 (571)
+...++..+|||||+.|..++.-.- +..++.++...
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~l-riTVWSL~t~~ 125 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFDL-RITVWSLNTQK 125 (447)
T ss_pred CCCcceeeeECCCcceEeeeeccee-EEEEEEeccce
Confidence 4446677899999998887766542 22344444433
No 294
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=95.65 E-value=0.75 Score=46.45 Aligned_cols=123 Identities=13% Similarity=0.038 Sum_probs=67.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
..||+++++ |....+.+. ..+.+.+++|+|+|+-.+.+-.-... .+-++|+... .+..-..+.-
T Consensus 251 q~Lyll~t~-g~s~~V~L~--------k~GPVhdv~W~~s~~EF~VvyGfMPA--kvtifnlr~~---~v~df~egpR-- 314 (566)
T KOG2315|consen 251 QTLYLLATQ-GESVSVPLL--------KEGPVHDVTWSPSGREFAVVYGFMPA--KVTIFNLRGK---PVFDFPEGPR-- 314 (566)
T ss_pred ceEEEEEec-CceEEEecC--------CCCCceEEEECCCCCEEEEEEecccc--eEEEEcCCCC---EeEeCCCCCc--
Confidence 468999998 566666553 57788899999999965555443322 3445555543 2222111100
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCC-ccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTG-FRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g-~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
...-+++.+ |++++-=+. ...+-++|..+ .+.|++-.-.-.....|+|||.+++..++.
T Consensus 315 ---------N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n--~K~i~~~~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 315 ---------NTAFFNPHGNIILLAGFGNLPGDMEVWDVPN--RKLIAKFKAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ---------cceEECCCCCEEEEeecCCCCCceEEEeccc--hhhccccccCCceEEEEcCCCcEEEEEecc
Confidence 000123333 555542110 12344555444 455655433333444699999999888874
No 295
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.64 E-value=0.017 Score=58.21 Aligned_cols=91 Identities=19% Similarity=0.159 Sum_probs=61.4
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..-+|+.+|||+.......+... ++.++..+.|+-|+.+||.-.... .| ....+++.-+.-|+++.
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~---YLr~Wa~aL~cPiiSVdYSLAPEa--PF---------PRaleEv~fAYcW~inn 460 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEP---YLRSWAQALGCPIISVDYSLAPEA--PF---------PRALEEVFFAYCWAINN 460 (880)
T ss_pred CceEEEEecCCceeeeccccccH---HHHHHHHHhCCCeEEeeeccCCCC--CC---------CcHHHHHHHHHHHHhcC
Confidence 44689999999876654443221 134455579999999999643211 11 12256677777888876
Q ss_pred C---CCcCCcEEEEeechHHHHHHHHHh
Q 008274 428 G---LAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 428 ~---~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
. ....+||++.|-|+||.+.+..++
T Consensus 461 ~allG~TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 461 CALLGSTGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred HHHhCcccceEEEeccCCCcceeehhHH
Confidence 2 235789999999999998765554
No 296
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=95.61 E-value=1 Score=42.28 Aligned_cols=160 Identities=11% Similarity=0.069 Sum_probs=77.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEE-ECCCC---ceEEEEEeecC
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKF-DIKTG---QRKVILVEELD 155 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~-d~~~g---~~~~l~~~~~~ 155 (571)
..+.+|++++.....++. ........+-||||++++...--. +-.+|.. =.+.| +.+++.+....
T Consensus 209 t~i~lw~lkGq~L~~idt---------nq~~n~~aavSP~GRFia~~gFTp--DVkVwE~~f~kdG~fqev~rvf~LkGH 277 (420)
T KOG2096|consen 209 TKICLWDLKGQLLQSIDT---------NQSSNYDAAVSPDGRFIAVSGFTP--DVKVWEPIFTKDGTFQEVKRVFSLKGH 277 (420)
T ss_pred CcEEEEecCCceeeeecc---------ccccccceeeCCCCcEEEEecCCC--CceEEEEEeccCcchhhhhhhheeccc
Confidence 457778888443344433 223344568899999877653222 1112221 12233 33444332211
Q ss_pred ----CeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCC---Cceeeceeec--------CeEEEEEEEEeec
Q 008274 156 ----SWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDIN---GTCLGPITEG--------DWMVEQIVGVNEA 219 (571)
Q Consensus 156 ----~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~---~~~~~~lT~~--------~~~~~~~~~~s~d 219 (571)
.|. .| +++. -+....++|-+.||-.|.. +..+..|-.+ .-.+ .. ..+|.
T Consensus 278 ~saV~~~----aF---------sn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~-RL-~lsP~ 342 (420)
T KOG2096|consen 278 QSAVLAA----AF---------SNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV-RL-ELSPS 342 (420)
T ss_pred hhheeee----ee---------CCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCce-EE-EeCCC
Confidence 121 12 2222 3334466787777766531 1122222111 1122 23 47899
Q ss_pred CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--CCceEEEEECCCCCEEEE
Q 008274 220 SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--GKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 220 g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~~s~~g~~~v~ 276 (571)
|+.|..+.. ...++|... +|. ...++-. +....+.+++++|++++-
T Consensus 343 g~~lA~s~g----s~l~~~~se---~g~----~~~~~e~~h~~~Is~is~~~~g~~~at 390 (420)
T KOG2096|consen 343 GDSLAVSFG----SDLKVFASE---DGK----DYPELEDIHSTTISSISYSSDGKYIAT 390 (420)
T ss_pred CcEEEeecC----CceEEEEcc---cCc----cchhHHHhhcCceeeEEecCCCcEEee
Confidence 987777643 136666543 333 2222221 222345599999998754
No 297
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.57 E-value=5.9 Score=45.65 Aligned_cols=85 Identities=11% Similarity=0.096 Sum_probs=40.7
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCee---eccCCcccCCCCCccCCCe-EEEEEecCC
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWV---NLHDCFTPLDKGVTKYSGG-FIWASEKTG 186 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~---~~~~~~~~~~~~~~~~~d~-~~~~s~~~g 186 (571)
..++++|++..+++.. ..+ ..|+++|..+|..+.+.... ..... .....|.. +.+...++++ .+++++..
T Consensus 686 ~gVa~dp~~g~LyVad-~~~--~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~-P~GIavspdG~~LYVADs~- 760 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAM-AGQ--HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQ-PSGISLSPDLKELYIADSE- 760 (1057)
T ss_pred eEEEEecCCCeEEEEE-CCC--CeEEEEECCCCeEEEEecCCccccCCCCccccccccC-ccEEEEeCCCCEEEEEECC-
Confidence 3578999554443332 221 24999999988765543210 00000 00001111 1112334543 45555543
Q ss_pred ccEEEEEeCCCceee
Q 008274 187 FRHLYLHDINGTCLG 201 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~ 201 (571)
...|.+++++++..+
T Consensus 761 n~~Irv~D~~tg~~~ 775 (1057)
T PLN02919 761 SSSIRALDLKTGGSR 775 (1057)
T ss_pred CCeEEEEECCCCcEE
Confidence 356888887765443
No 298
>KOG4328 consensus WD40 protein [Function unknown]
Probab=95.57 E-value=2.7 Score=41.51 Aligned_cols=161 Identities=11% Similarity=0.095 Sum_probs=91.6
Q ss_pred CCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEe-ecCCeeeccCCcccCCCCCccCCCeEEEEEe
Q 008274 106 YDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVE-ELDSWVNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~-~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
+....+..+.|+|-+. .++..+..+ -|-..|.+++....+... .+..|+. .+... ..+.-++..+
T Consensus 232 ~hs~~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs------~~d~~---~e~~~vl~~~ 298 (498)
T KOG4328|consen 232 PHSGPVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFS------SLDFS---AESRSVLFGD 298 (498)
T ss_pred cCCccccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeee------ecccc---CCCccEEEee
Confidence 3455678889999776 444443333 278889998876554432 2223332 22211 1223333334
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE-eCCCCCCCCCCCeEecC---C
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK-LYPDWNHTLEAPVKLTN---G 259 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-l~~~g~~~~~~~~~lt~---~ 259 (571)
.-|..+++-...++.+...++-.+.-+..+. +.|-..+++.++..++- ..||-+. + .+.. .+ .|.. .
T Consensus 299 ~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~-~NP~~p~~laT~s~D~T--~kIWD~R~l--~~K~---sp-~lst~~Hr 369 (498)
T KOG4328|consen 299 NVGNFNVIDLRTDGSEYENLRLHKKKITSVA-LNPVCPWFLATASLDQT--AKIWDLRQL--RGKA---SP-FLSTLPHR 369 (498)
T ss_pred cccceEEEEeecCCccchhhhhhhcccceee-cCCCCchheeecccCcc--eeeeehhhh--cCCC---Cc-ceeccccc
Confidence 5456667766677776666766555566664 88888888888876653 5566442 2 2220 11 2322 2
Q ss_pred CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 260 KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
--.+++.|||+|-.++.++..- +|.+++.
T Consensus 370 rsV~sAyFSPs~gtl~TT~~D~----~IRv~ds 398 (498)
T KOG4328|consen 370 RSVNSAYFSPSGGTLLTTCQDN----EIRVFDS 398 (498)
T ss_pred ceeeeeEEcCCCCceEeeccCC----ceEEeec
Confidence 2356678999887777665432 4555543
No 299
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.55 E-value=0.088 Score=54.33 Aligned_cols=131 Identities=18% Similarity=0.214 Sum_probs=84.9
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh----hhh--HH
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG----LKF--EA 403 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~----~~~--~~ 403 (571)
..|...++.|..- . ++ ++.+ ||++..... .+..... .+.....+||+++.-|- |+.+.. ..| ..
T Consensus 15 ~~i~fev~LP~~W-N--gR---~~~~-GgGG~~G~i-~~~~~~~-~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~ 84 (474)
T PF07519_consen 15 PNIRFEVWLPDNW-N--GR---FLQV-GGGGFAGGI-NYADGKA-SMATALARGYATASTDS-GHQGSAGSDDASFGNNP 84 (474)
T ss_pred ceEEEEEECChhh-c--cC---eEEE-CCCeeeCcc-ccccccc-ccchhhhcCeEEEEecC-CCCCCcccccccccCCH
Confidence 3788999999842 1 22 2333 433332211 1111000 03455688999999995 332221 111 12
Q ss_pred HHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
....+++...+++...+.+.+++. ....+++--..|.|.||.-++..|.++|+.|.++++.+|..+|
T Consensus 85 ~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 85 EALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 223455555677788888888876 3356788999999999999999999999999999999998764
No 300
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=95.53 E-value=1.8 Score=40.45 Aligned_cols=123 Identities=20% Similarity=0.166 Sum_probs=66.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
++++|++.+...-...+ .....-+-.+.|++|++.|+-+.... .|+..|+++|++.+-.+. ...+.+.
T Consensus 70 ~I~LWnv~gdceN~~~l-------kgHsgAVM~l~~~~d~s~i~S~gtDk----~v~~wD~~tG~~~rk~k~-h~~~vNs 137 (338)
T KOG0265|consen 70 AIVLWNVYGDCENFWVL-------KGHSGAVMELHGMRDGSHILSCGTDK----TVRGWDAETGKRIRKHKG-HTSFVNS 137 (338)
T ss_pred eEEEEeccccccceeee-------ccccceeEeeeeccCCCEEEEecCCc----eEEEEecccceeeehhcc-ccceeee
Confidence 46677765533322222 22345677789999999877765443 499999999986543221 1223332
Q ss_pred cCCcccCCCCCccCCCeEEEEE-ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s-~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
..|.. -+-.++.| ..+| .+-++|.-.++..++-...++...+. |..++..+.--.
T Consensus 138 ---~~p~r------rg~~lv~SgsdD~--t~kl~D~R~k~~~~t~~~kyqltAv~-f~d~s~qv~sgg 193 (338)
T KOG0265|consen 138 ---LDPSR------RGPQLVCSGSDDG--TLKLWDIRKKEAIKTFENKYQLTAVG-FKDTSDQVISGG 193 (338)
T ss_pred ---cCccc------cCCeEEEecCCCc--eEEEEeecccchhhccccceeEEEEE-ecccccceeecc
Confidence 11211 11133333 3344 45556655554444444566666664 877776655443
No 301
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.50 E-value=0.72 Score=44.81 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=71.0
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEe--c
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASE--K 184 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~--~ 184 (571)
...+-+..|||||++|+.+... + ..+.++++|.+ ..++. .+..| .|..+........+.++..+. +
T Consensus 186 ~~eV~DL~FS~dgk~lasig~d-~----~~VW~~~~g~~~a~~t~-~~k~~-----~~~~cRF~~d~~~~~l~laa~~~~ 254 (398)
T KOG0771|consen 186 HAEVKDLDFSPDGKFLASIGAD-S----ARVWSVNTGAALARKTP-FSKDE-----MFSSCRFSVDNAQETLRLAASQFP 254 (398)
T ss_pred cCccccceeCCCCcEEEEecCC-c----eEEEEeccCchhhhcCC-cccch-----hhhhceecccCCCceEEEEEecCC
Confidence 3455667899999999888543 2 45557777733 12221 11112 233333221112223333222 2
Q ss_pred CCccEEEEEeCCCc----eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC
Q 008274 185 TGFRHLYLHDINGT----CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260 (571)
Q Consensus 185 ~g~~~l~~~~~~~~----~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~ 260 (571)
.+.-.++...+-.+ ..++.+...-.+... .+|+||+.+..-+..+. ..+|...- .+..++....
T Consensus 255 ~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl-~VS~dGkf~AlGT~dGs---Vai~~~~~--------lq~~~~vk~a 322 (398)
T KOG0771|consen 255 GGGVRLCDISLWSGSNFLRLRKKIKRFKSISSL-AVSDDGKFLALGTMDGS---VAIYDAKS--------LQRLQYVKEA 322 (398)
T ss_pred CCceeEEEeeeeccccccchhhhhhccCcceeE-EEcCCCcEEEEeccCCc---EEEEEece--------eeeeEeehhh
Confidence 33333333333222 233334333344444 48999998888777433 55554321 0112222211
Q ss_pred --c-eEEEEECCCCCEEEE
Q 008274 261 --G-KHVAVLDHNMRNFVD 276 (571)
Q Consensus 261 --g-~~~~~~s~~g~~~v~ 276 (571)
+ .-...|+||.++++-
T Consensus 323 H~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 323 HLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred heeeeeeEEEcCCcCcccc
Confidence 1 223489999887765
No 302
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=95.47 E-value=0.13 Score=50.56 Aligned_cols=55 Identities=18% Similarity=0.125 Sum_probs=36.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.|.+||.++|+...- + ..+.....+.+-||+.-++++-.- ...|...|+.+|+..
T Consensus 281 ~lKlwDtETG~~~~~-f--------~~~~~~~cvkf~pd~~n~fl~G~s---d~ki~~wDiRs~kvv 335 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSR-F--------HLDKVPTCVKFHPDNQNIFLVGGS---DKKIRQWDIRSGKVV 335 (503)
T ss_pred eeeeeccccceEEEE-E--------ecCCCceeeecCCCCCcEEEEecC---CCcEEEEeccchHHH
Confidence 468899999986532 1 234556678999999544444221 224888899998743
No 303
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.40 E-value=0.054 Score=55.09 Aligned_cols=62 Identities=16% Similarity=0.046 Sum_probs=50.7
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHc---------------C-----CC-eeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAA---------------R-----KP-YEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
.++||..|..|.+|+...++.+.++|.-. | .+ .++..+-++||.. +..++..++.+.
T Consensus 348 irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmV--p~qP~~al~m~~ 425 (433)
T PLN03016 348 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA--EYRPNETFIMFQ 425 (433)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCC--CCCHHHHHHHHH
Confidence 59999999999999999999999888511 1 23 7888889999988 347888889999
Q ss_pred HHHHH
Q 008274 565 EFIER 569 (571)
Q Consensus 565 ~fl~~ 569 (571)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99864
No 304
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.35 E-value=1.9 Score=48.66 Aligned_cols=109 Identities=13% Similarity=0.121 Sum_probs=57.4
Q ss_pred CCceeEEEEEccCCeEEEEEEeccC-c-cEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEe
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQ-T-KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASE 183 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~-~-~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~ 183 (571)
.+.....++|-.||+++|...-..+ + .+.|-+++-+ |+..-..+ +. ..+...++|.|.| ++..+.
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE-~v----------~gLe~~l~WrPsG~lIA~~q 275 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSE-PV----------DGLEGALSWRPSGNLIASSQ 275 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccc-cC----------CCccCCccCCCCCCEEEEEE
Confidence 3446667899999997765543222 2 3445555555 54322211 11 1222233555555 555544
Q ss_pred c-CCccEEEEEeCCCceeec----eeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 184 K-TGFRHLYLHDINGTCLGP----ITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 184 ~-~g~~~l~~~~~~~~~~~~----lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
+ .+...|..+...|-.-.. +......+... .|+.|+..|.+...
T Consensus 276 ~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l-~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 276 RLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIEL-AWNSDSEILAVWLE 324 (928)
T ss_pred EcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEE-EECCCCCEEEEEec
Confidence 4 334555556555533222 22234455565 49999988887653
No 305
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.35 E-value=0.066 Score=51.95 Aligned_cols=168 Identities=17% Similarity=0.246 Sum_probs=90.6
Q ss_pred ccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHH
Q 008274 368 WINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLS 447 (571)
Q Consensus 368 ~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 447 (571)
|..--...+..|+++|+-|+.+|---.- |....... ...|+...+++...+- ...++.++|+|+|+=+-
T Consensus 272 Wr~lDk~v~~~l~~~gvpVvGvdsLRYf-----W~~rtPe~----~a~Dl~r~i~~y~~~w--~~~~~~liGySfGADvl 340 (456)
T COG3946 272 WRDLDKEVAEALQKQGVPVVGVDSLRYF-----WSERTPEQ----IAADLSRLIRFYARRW--GAKRVLLIGYSFGADVL 340 (456)
T ss_pred hhhhhHHHHHHHHHCCCceeeeehhhhh-----hccCCHHH----HHHHHHHHHHHHHHhh--CcceEEEEeecccchhh
Confidence 3333455688999999999999843110 11111111 2577888888776653 56799999999999887
Q ss_pred HHHHhcCCCeeEEEEEcCccCCcc---cccchhhhhhcCCCCCChhhhccCCcchhhccCC-CcEEEEecCCCC--CCCh
Q 008274 448 AITLARFPDVFQCAVSGAPVTSWD---GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDE--NVHF 521 (571)
Q Consensus 448 ~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~--~v~~ 521 (571)
-.+..+-|...+..|....+..+. .|... .+.++|...+. .......+.++. ..+..|+|.+|. .||
T Consensus 341 P~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~-v~gWlg~~~~g-----~~~~~~~~~~l~~~~v~CiYG~~e~d~~Cp- 413 (456)
T COG3946 341 PFAYNRLPPATRQRVRMVSLLGLGRTADFEIS-VEGWLGMAGEG-----AGDVVPDIAKLPLARVQCIYGQEEKDTACP- 413 (456)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhccccceEEEE-EeeeeccCCcC-----CCCcchhhhhCCcceeEEEecCccccccCC-
Confidence 666655454322211111111110 01000 11122221111 123445566666 478999997654 443
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHH
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 566 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 566 (571)
.|+. +.++.+.+|+ ||.| ..+-+.+.+.|++=
T Consensus 414 --------~l~~--~~~~~v~lpG-gHHF--d~dy~~la~~il~~ 445 (456)
T COG3946 414 --------SLKA--KGVDTVKLPG-GHHF--DGDYEKLAKAILQG 445 (456)
T ss_pred --------cchh--hcceeEecCC-Cccc--CccHHHHHHHHHHH
Confidence 2333 3456678999 5555 24455555666553
No 306
>PLN02209 serine carboxypeptidase
Probab=95.35 E-value=0.083 Score=53.80 Aligned_cols=62 Identities=15% Similarity=0.066 Sum_probs=50.2
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHc---------------C-----CC-eeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAA---------------R-----KP-YEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
.++||..|..|.+|+...++++.+.|.-. | .+ .++..+-++||.. . ..++..++.+.
T Consensus 352 irVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV-p-~qP~~al~m~~ 429 (437)
T PLN02209 352 YRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-E-YLPEESSIMFQ 429 (437)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc-C-cCHHHHHHHHH
Confidence 37999999999999999999999888511 1 23 7888889999987 3 47888888888
Q ss_pred HHHHH
Q 008274 565 EFIER 569 (571)
Q Consensus 565 ~fl~~ 569 (571)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 88854
No 307
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=95.32 E-value=0.035 Score=66.03 Aligned_cols=98 Identities=13% Similarity=0.082 Sum_probs=60.6
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.++++||.++... .|..+++.| ..++.|+.++.+|.+.... ....++++.+.+...+...
T Consensus 1069 ~~l~~lh~~~g~~~-------~~~~l~~~l-~~~~~v~~~~~~g~~~~~~----------~~~~l~~la~~~~~~i~~~- 1129 (1296)
T PRK10252 1069 PTLFCFHPASGFAW-------QFSVLSRYL-DPQWSIYGIQSPRPDGPMQ----------TATSLDEVCEAHLATLLEQ- 1129 (1296)
T ss_pred CCeEEecCCCCchH-------HHHHHHHhc-CCCCcEEEEECCCCCCCCC----------CCCCHHHHHHHHHHHHHhh-
Confidence 56788999776533 234445555 4579999999998764311 0112333333222222211
Q ss_pred CcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAP 466 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~ 466 (571)
....++.++|||+||.++..++.+ .++.+..++..++
T Consensus 1130 ~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1130 QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 123579999999999999998874 5677777766554
No 308
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.28 E-value=4.7 Score=42.38 Aligned_cols=162 Identities=15% Similarity=0.171 Sum_probs=84.4
Q ss_pred eeccCC-CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC--CceEEE
Q 008274 19 QEEMDR-KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG--GPVSWM 95 (571)
Q Consensus 19 ~~~~~~-~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~--~~~~~~ 95 (571)
.|++.. ...+.|.+||+.+.|++.++...+.. |+.-.+.+ .+.+.+
T Consensus 169 ~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~k-------------------------------v~~h~~gt~~~~d~lv 217 (682)
T COG1770 169 PDEITNTSGSFAWAADGKTLFYTRLDENHRPDK-------------------------------VWRHRLGTPGSSDELV 217 (682)
T ss_pred chhhcccccceEEecCCCeEEEEEEcCCCCcce-------------------------------EEEEecCCCCCcceEE
Confidence 334443 67899999999999999887764432 33333333 222222
Q ss_pred eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC--CceEEEEEeecCCeeeccCCcccCCCCCcc
Q 008274 96 DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT--GQRKVILVEELDSWVNLHDCFTPLDKGVTK 173 (571)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~--g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~ 173 (571)
-.+ ..+.+...+.=|-..+.|+... .+...++++.++.+. ++.+.+...+.+.--. . ..
T Consensus 218 yeE-------~d~~f~~~v~~s~s~~yi~i~~-~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~------~-----eh 278 (682)
T COG1770 218 YEE-------KDDRFFLSVGRSRSEAYIVISL-GSHITSEVRLLDADDPEAEPKVVLPRENGVEYS------V-----EH 278 (682)
T ss_pred EEc-------CCCcEEEEeeeccCCceEEEEc-CCCcceeEEEEecCCCCCceEEEEEcCCCcEEe------e-----ee
Confidence 111 1334444455455566665554 333456778777775 4456665544331110 0 11
Q ss_pred CCCeEEEEEecCC-ccEEEEEeC--CCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 174 YSGGFIWASEKTG-FRHLYLHDI--NGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 174 ~~d~~~~~s~~~g-~~~l~~~~~--~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
-+|.|++.++.+| ...|+..+. .....+.+......+. +.+++-=.++|+..-..++
T Consensus 279 ~~d~f~i~sN~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~-l~~~~~f~~~lVl~eR~~g 338 (682)
T COG1770 279 GGDRFYILSNADGKNFKLVRAPVSADKSNWRELIPHREDVR-LEGVDLFADHLVLLERQEG 338 (682)
T ss_pred cCcEEEEEecCCCcceEEEEccCCCChhcCeeeeccCCCce-eeeeeeeccEEEEEecccC
Confidence 2556888899888 566777665 1122333333221111 1123333456666555444
No 309
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=95.26 E-value=0.12 Score=55.86 Aligned_cols=74 Identities=23% Similarity=0.242 Sum_probs=54.1
Q ss_pred eEEEEEecCCccEEEEEeCCCceeece-eecCeEEEEEEEEeecCcEEEE-EEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCLGPI-TEGDWMVEQIVGVNEASGQVYF-TGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~~~l-T~~~~~~~~~~~~s~dg~~l~~-~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
+|.|.++..| +|.++|.+|...+.+ +.....+-.+. |||||+.|.| ++-+.-+....||+.+|...++ .+.
T Consensus 320 kiAfv~~~~~--~L~~~D~dG~n~~~ve~~~~~~i~sP~-~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~----~~v 392 (912)
T TIGR02171 320 KLAFRNDVTG--NLAYIDYTKGASRAVEIEDTISVYHPD-ISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGS----GLV 392 (912)
T ss_pred eEEEEEcCCC--eEEEEecCCCCceEEEecCCCceecCc-CCCCCCEEEEEEeecCCCCCceEEEEehhccCC----Cce
Confidence 4777776555 899999999988888 77666666664 9999999999 5444412347899999965554 444
Q ss_pred Eec
Q 008274 255 KLT 257 (571)
Q Consensus 255 ~lt 257 (571)
.|.
T Consensus 393 kl~ 395 (912)
T TIGR02171 393 KLP 395 (912)
T ss_pred Eee
Confidence 554
No 310
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.21 E-value=1.7 Score=48.99 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=55.0
Q ss_pred ccCCCe-EEEEEe---cCC-ccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 172 TKYSGG-FIWASE---KTG-FRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 172 ~~~~d~-~~~~s~---~~g-~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
+|.+|| |+.++. ..| .+.|.+++.+| +..- |++.. ......+|-|.|+.|.-+....+. ..|..+.- .
T Consensus 216 SWRGDG~yFAVss~~~~~~~~R~iRVy~ReG-~L~s-tSE~v~gLe~~l~WrPsG~lIA~~q~~~~~--~~VvFfEr--N 289 (928)
T PF04762_consen 216 SWRGDGEYFAVSSVEPETGSRRVIRVYSREG-ELQS-TSEPVDGLEGALSWRPSGNLIASSQRLPDR--HDVVFFER--N 289 (928)
T ss_pred EECCCCcEEEEEEEEcCCCceeEEEEECCCc-eEEe-ccccCCCccCCccCCCCCCEEEEEEEcCCC--cEEEEEec--C
Confidence 577887 444432 355 67778888764 2222 22221 123455799999988877764443 33433332 2
Q ss_pred CCCCCCCCeEecC---CCceEEEEECCCCCEEEEEeeC
Q 008274 246 WNHTLEAPVKLTN---GKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 246 g~~~~~~~~~lt~---~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
|- + .....|.. +.......|++|+..++.....
T Consensus 290 GL-r-hgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~ 325 (928)
T PF04762_consen 290 GL-R-HGEFTLRFDPEEEKVIELAWNSDSEILAVWLED 325 (928)
T ss_pred Cc-E-eeeEecCCCCCCceeeEEEECCCCCEEEEEecC
Confidence 21 0 01122221 2234556899999988887644
No 311
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=95.21 E-value=3.9 Score=41.11 Aligned_cols=226 Identities=11% Similarity=0.047 Sum_probs=111.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE--EeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL--VEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~--~~~~~~w~ 158 (571)
++.+||.++|....- ...- ....-....+.||-|.++++.+.... |+++++ |+.....- .....+..
T Consensus 109 ~~~vwd~~sg~iv~s-f~~~----~q~~~~Wp~~k~s~~D~y~ARvv~~s-----l~i~e~-t~n~~~~p~~~lr~~gi~ 177 (561)
T COG5354 109 NVFVWDIASGMIVFS-FNGI----SQPYLGWPVLKFSIDDKYVARVVGSS-----LYIHEI-TDNIEEHPFKNLRPVGIL 177 (561)
T ss_pred ceeEEeccCceeEee-cccc----CCcccccceeeeeecchhhhhhccCe-----EEEEec-CCccccCchhhcccccee
Confidence 689999999976432 1100 00101122468999998877664332 777775 44322110 00001111
Q ss_pred eccCCcccCCCCCccCCCeE-EEEEecCC---ccEEEEEeCCCceeeceeecCeEEEEE-EEEeecCcEEEEEEcCC---
Q 008274 159 NLHDCFTPLDKGVTKYSGGF-IWASEKTG---FRHLYLHDINGTCLGPITEGDWMVEQI-VGVNEASGQVYFTGTLD--- 230 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~-~~~s~~~g---~~~l~~~~~~~~~~~~lT~~~~~~~~~-~~~s~dg~~l~~~~~~~--- 230 (571)
.|...+.+ ..+.+ +|+.+..| .-.|+.++. +. ...|..-+.+..+ ..|.+.|++|.+....+
T Consensus 178 ----dFsisP~~---n~~~la~~tPEk~~kpa~~~i~sIp~-~s--~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ks 247 (561)
T COG5354 178 ----DFSISPEG---NHDELAYWTPEKLNKPAMVRILSIPK-NS--VLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKS 247 (561)
T ss_pred ----eEEecCCC---CCceEEEEccccCCCCcEEEEEEccC-CC--eeeeeeeEeecccEEEEecCCceEEEEEEEeeec
Confidence 12222211 23344 45555544 344555542 22 2233333444322 25999999998887642
Q ss_pred ---CCceeEEEEEEeCCCCCCCCCCCeEecCC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCC
Q 008274 231 ---GPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPL 306 (571)
Q Consensus 231 ---~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~ 306 (571)
.-++.+||...+ .+. ..+..-.. .-.+.+.|+|.++.++.+... .|..+..+++..+ ++-..+.+.
T Consensus 248 nKsyfgesnLyl~~~--~e~----~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~--~pa~~s~~~lr~N--l~~~~Pe~~ 317 (561)
T COG5354 248 NKSYFGESNLYLLRI--TER----SIPVEKDLKDPVHDFTWEPLSSRFAVISGY--MPASVSVFDLRGN--LRFYFPEQK 317 (561)
T ss_pred ccceeccceEEEEee--ccc----ccceeccccccceeeeecccCCceeEEecc--cccceeecccccc--eEEecCCcc
Confidence 122477888777 332 11111121 236788999999888776533 5556777776433 332222111
Q ss_pred ChhhhccCCC-CCCeEEEEEcCCCcEEEEEEEcCCC
Q 008274 307 TVPRIKRLQL-EPPDIVQIQANDGTVLYGALYKPDE 341 (571)
Q Consensus 307 ~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~P~~ 341 (571)
... .-+ +..+.+.+..-|+..-...++.|.+
T Consensus 318 rNT----~~fsp~~r~il~agF~nl~gni~i~~~~~ 349 (561)
T COG5354 318 RNT----IFFSPHERYILFAGFDNLQGNIEIFDPAG 349 (561)
T ss_pred ccc----ccccCcccEEEEecCCccccceEEeccCC
Confidence 111 111 2334445555566666666677665
No 312
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.18 E-value=0.53 Score=45.69 Aligned_cols=54 Identities=20% Similarity=0.156 Sum_probs=37.4
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+++.+||||+.|+++..+ ...+|+.++|....-..
T Consensus 188 eV~DL~FS~dgk~lasig~d-------------------------------------~~~VW~~~~g~~~a~~t------ 224 (398)
T KOG0771|consen 188 EVKDLDFSPDGKFLASIGAD-------------------------------------SARVWSVNTGAALARKT------ 224 (398)
T ss_pred ccccceeCCCCcEEEEecCC-------------------------------------ceEEEEeccCchhhhcC------
Confidence 46889999999999998654 24778888874322111
Q ss_pred CCCCCceeEEEEEccCC
Q 008274 104 QNYDEEYLARVNWMHGN 120 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg 120 (571)
..+.++.+....|+.|+
T Consensus 225 ~~~k~~~~~~cRF~~d~ 241 (398)
T KOG0771|consen 225 PFSKDEMFSSCRFSVDN 241 (398)
T ss_pred CcccchhhhhceecccC
Confidence 13456667777888887
No 313
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.17 E-value=0.057 Score=54.43 Aligned_cols=81 Identities=16% Similarity=0.040 Sum_probs=51.8
Q ss_pred chhhhHHHHhCCcEE-----EE-ECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHH
Q 008274 372 VDMRAQYLRSKGILV-----WK-LDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGY 445 (571)
Q Consensus 372 ~~~~~~~l~~~G~~v-----~~-~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 445 (571)
|..+++.|.+.||.. .+ +|.|-+.... .. ....+...|+.+.+. ...+|.|+||||||.
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~~~--------~~----~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl 131 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLSPAER--------DE----YFTKLKQLIEEAYKK---NGKKVVLIAHSMGGL 131 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhchhhH--------HH----HHHHHHHHHHHHHHh---cCCcEEEEEeCCCch
Confidence 555788899888763 22 5777332200 00 123344555554443 367999999999999
Q ss_pred HHHHHHhcCCC------eeEEEEEcCcc
Q 008274 446 LSAITLARFPD------VFQCAVSGAPV 467 (571)
Q Consensus 446 ~a~~~~~~~~~------~~~~~v~~~~~ 467 (571)
++..++...+. .++..|.+++.
T Consensus 132 ~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 132 VARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 99998887643 47777777654
No 314
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=95.10 E-value=4 Score=40.61 Aligned_cols=176 Identities=10% Similarity=0.059 Sum_probs=95.7
Q ss_pred CCCCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee
Q 008274 74 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE 153 (571)
Q Consensus 74 g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~ 153 (571)
+...+...|+++-+....++. ++ ....+.+..+.|.|-|++++.+++.. ...||.+.-.+- ...|..++
T Consensus 333 ~ts~td~~i~V~kv~~~~P~~-t~-------~GH~g~V~alk~n~tg~LLaS~SdD~--TlkiWs~~~~~~-~~~l~~Hs 401 (524)
T KOG0273|consen 333 ATSSTDGCIHVCKVGEDRPVK-TF-------IGHHGEVNALKWNPTGSLLASCSDDG--TLKIWSMGQSNS-VHDLQAHS 401 (524)
T ss_pred eecCCCceEEEEEecCCCcce-ee-------ecccCceEEEEECCCCceEEEecCCC--eeEeeecCCCcc-hhhhhhhc
Confidence 333334456666665443321 11 24567889999999999888887654 335665433321 11121111
Q ss_pred ----cCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 154 ----LDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 154 ----~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
.-.|.+.++.-. ...++ .+..+..++. +-++|+..+ .+..|+++.-.|-+.. +||+|+++..-
T Consensus 402 kei~t~~wsp~g~v~~-------n~~~~~~l~sas~dst--V~lwdv~~gv~i~~f~kH~~pVysva-fS~~g~ylAsG- 470 (524)
T KOG0273|consen 402 KEIYTIKWSPTGPVTS-------NPNMNLMLASASFDST--VKLWDVESGVPIHTLMKHQEPVYSVA-FSPNGRYLASG- 470 (524)
T ss_pred cceeeEeecCCCCccC-------CCcCCceEEEeecCCe--EEEEEccCCceeEeeccCCCceEEEE-ecCCCcEEEec-
Confidence 113544332211 11222 3333333333 344554444 4566777776777765 99999877654
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeC
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
+.++. .+++.... +. -.+.....++...+.|+.+|.++...++.
T Consensus 471 s~dg~--V~iws~~~---~~----l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 471 SLDGC--VHIWSTKT---GK----LVKSYQGTGGIFELCWNAAGDKLGACASD 514 (524)
T ss_pred CCCCe--eEeccccc---hh----eeEeecCCCeEEEEEEcCCCCEEEEEecC
Confidence 44443 77776654 21 34445555555677899999888766554
No 315
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.10 E-value=0.018 Score=60.24 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHc--C--CCc---CCcEEEEeechHHHHHHHHHhc
Q 008274 416 DQLTGAEWLIKQ--G--LAK---VGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 416 D~~~~~~~l~~~--~--~~d---~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
=+.+|++++.+. + .-+ +..|+++||||||.+|..++..
T Consensus 158 YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 158 YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 345666666654 1 222 6679999999999999877763
No 316
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.95 E-value=1.3 Score=44.32 Aligned_cols=180 Identities=10% Similarity=-0.021 Sum_probs=89.4
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCC--eEEEEEEeccCc---cEEEEEEECCCCce-EEEEEee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN--ILTAQVLNRSQT---KLKVLKFDIKTGQR-KVILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg--~~i~~~~~r~~~---~~~i~~~d~~~g~~-~~l~~~~ 153 (571)
.+|+++++ ++..-+.... .-....+.++.|||-| ..++++.....+ ...|+.+...+-.. +.+.+-.
T Consensus 152 ~sl~i~e~-t~n~~~~p~~------~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~ 224 (561)
T COG5354 152 SSLYIHEI-TDNIEEHPFK------NLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVS 224 (561)
T ss_pred CeEEEEec-CCccccCchh------hccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeec
Confidence 36788887 5443333221 1123466778999975 366776543322 33566665222111 1222211
Q ss_pred cC--CeeeccCCcccCCCCCccCCCeEEEEE------ecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEE
Q 008274 154 LD--SWVNLHDCFTPLDKGVTKYSGGFIWAS------EKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV 223 (571)
Q Consensus 154 ~~--~w~~~~~~~~~~~~~~~~~~d~~~~~s------~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l 223 (571)
+- -|.. .++-+++.. ++.=+ .+||++++.....+..-.-.-.|.++. |+|.++..
T Consensus 225 ~~qLkW~~--------------~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~-W~p~S~~F 289 (561)
T COG5354 225 GVQLKWQV--------------LGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFT-WEPLSSRF 289 (561)
T ss_pred ccEEEEec--------------CCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeee-ecccCCce
Confidence 11 2321 233343332 22223 899999987544332211122466774 99999988
Q ss_pred EEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 224 YFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
..++... ...+...++ .|. .+-.-...-.....|||.++++++. .-.+.-..+.+++.
T Consensus 290 ~vi~g~~---pa~~s~~~l--r~N-----l~~~~Pe~~rNT~~fsp~~r~il~a-gF~nl~gni~i~~~ 347 (561)
T COG5354 290 AVISGYM---PASVSVFDL--RGN-----LRFYFPEQKRNTIFFSPHERYILFA-GFDNLQGNIEIFDP 347 (561)
T ss_pred eEEeccc---ccceeeccc--ccc-----eEEecCCcccccccccCcccEEEEe-cCCccccceEEecc
Confidence 8887322 244444455 332 1111111122345788888877663 23344456666665
No 317
>PLN00181 protein SPA1-RELATED; Provisional
Probab=94.94 E-value=8.1 Score=43.37 Aligned_cols=176 Identities=10% Similarity=0.028 Sum_probs=86.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+.+||+.+++.... + ......+..+.|+| |+.+++...... .|.+.|+.+++...........+.
T Consensus 556 ~v~lWd~~~~~~~~~-~-------~~H~~~V~~l~~~p~~~~~L~Sgs~Dg----~v~iWd~~~~~~~~~~~~~~~v~~- 622 (793)
T PLN00181 556 VVQVWDVARSQLVTE-M-------KEHEKRVWSIDYSSADPTLLASGSDDG----SVKLWSINQGVSIGTIKTKANICC- 622 (793)
T ss_pred eEEEEECCCCeEEEE-e-------cCCCCCEEEEEEcCCCCCEEEEEcCCC----EEEEEECCCCcEEEEEecCCCeEE-
Confidence 578899998765332 2 23456788899997 777666654433 377778888765432221111010
Q ss_pred ccCCcccCCCCCcc-CCCe-EEEEEecCCccEEEEEeCCCce--eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 160 LHDCFTPLDKGVTK-YSGG-FIWASEKTGFRHLYLHDINGTC--LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 160 ~~~~~~~~~~~~~~-~~d~-~~~~s~~~g~~~l~~~~~~~~~--~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
. .+ ++++ +++....+| .|+++|+.... ...+......+..+ .|. +++.|+.. ..++ ..
T Consensus 623 ----v-------~~~~~~g~~latgs~dg--~I~iwD~~~~~~~~~~~~~h~~~V~~v-~f~-~~~~lvs~-s~D~--~i 684 (793)
T PLN00181 623 ----V-------QFPSESGRSLAFGSADH--KVYYYDLRNPKLPLCTMIGHSKTVSYV-RFV-DSSTLVSS-STDN--TL 684 (793)
T ss_pred ----E-------EEeCCCCCEEEEEeCCC--eEEEEECCCCCccceEecCCCCCEEEE-EEe-CCCEEEEE-ECCC--EE
Confidence 0 11 1223 444444455 56777765433 22233223234444 365 56655444 3343 25
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.+|.+.....+. .......+..-. ....+.+++++++++... .. ..+++++.
T Consensus 685 kiWd~~~~~~~~-~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs-~D---~~v~iw~~ 737 (793)
T PLN00181 685 KLWDLSMSISGI-NETPLHSFMGHTNVKNFVGLSVSDGYIATGS-ET---NEVFVYHK 737 (793)
T ss_pred EEEeCCCCcccc-CCcceEEEcCCCCCeeEEEEcCCCCEEEEEe-CC---CEEEEEEC
Confidence 565543200000 000222333222 233457889887654432 22 25666664
No 318
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=94.93 E-value=0.59 Score=45.45 Aligned_cols=124 Identities=11% Similarity=0.037 Sum_probs=67.1
Q ss_pred EEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccC
Q 008274 83 GVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHD 162 (571)
Q Consensus 83 ~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~ 162 (571)
.+||+.+|.-... + .+.-..+..+.|||+|-.++..+..+. ..||.+....- ...|-.+.+- -.+.
T Consensus 328 RvWDlRtgr~im~-L-------~gH~k~I~~V~fsPNGy~lATgs~Dnt--~kVWDLR~r~~-ly~ipAH~nl---VS~V 393 (459)
T KOG0272|consen 328 RVWDLRTGRCIMF-L-------AGHIKEILSVAFSPNGYHLATGSSDNT--CKVWDLRMRSE-LYTIPAHSNL---VSQV 393 (459)
T ss_pred heeecccCcEEEE-e-------cccccceeeEeECCCceEEeecCCCCc--EEEeeeccccc-ceecccccch---hhhe
Confidence 6799999875543 3 234567888999999987777655442 23443322211 1112111100 0011
Q ss_pred CcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 163 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 163 ~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
.|.| ..+.|+.++.-++.-+||.-. .....+.|...+-.|.+.- +++|+..|.-.+-+
T Consensus 394 k~~p-------~~g~fL~TasyD~t~kiWs~~-~~~~~ksLaGHe~kV~s~D-is~d~~~i~t~s~D 451 (459)
T KOG0272|consen 394 KYSP-------QEGYFLVTASYDNTVKIWSTR-TWSPLKSLAGHEGKVISLD-ISPDSQAIATSSFD 451 (459)
T ss_pred Eecc-------cCCeEEEEcccCcceeeecCC-CcccchhhcCCccceEEEE-eccCCceEEEeccC
Confidence 2222 122366666556666666632 3344566666555565554 78888877666543
No 319
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=94.84 E-value=3.4 Score=38.52 Aligned_cols=239 Identities=13% Similarity=0.105 Sum_probs=120.1
Q ss_pred cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC-CceEEEeccCC
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG-GPVSWMDLQCG 100 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~-~~~~~~~~~~~ 100 (571)
..+...+-||+|+|+|.=.+.| -.|.+||.-+ .+...+.+.
T Consensus 55 ~~Ki~~~~ws~Dsr~ivSaSqD------------------------------------GklIvWDs~TtnK~haipl~-- 96 (343)
T KOG0286|consen 55 LNKIYAMDWSTDSRRIVSASQD------------------------------------GKLIVWDSFTTNKVHAIPLP-- 96 (343)
T ss_pred ccceeeeEecCCcCeEEeeccC------------------------------------CeEEEEEcccccceeEEecC--
Confidence 4566789999999999765543 1478899776 444445442
Q ss_pred CCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC--CCceEEEEEeecC--CeeeccCCcccCCCCCccCCC
Q 008274 101 GTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK--TGQRKVILVEELD--SWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 101 ~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~--~g~~~~l~~~~~~--~w~~~~~~~~~~~~~~~~~~d 176 (571)
-..+-.-++||.|++++-- .-.+.-.||.+..+ .|..+ +.++... +++. -+. ..+|
T Consensus 97 -------s~WVMtCA~sPSg~~VAcG--GLdN~Csiy~ls~~d~~g~~~-v~r~l~gHtgylS------cC~----f~dD 156 (343)
T KOG0286|consen 97 -------SSWVMTCAYSPSGNFVACG--GLDNKCSIYPLSTRDAEGNVR-VSRELAGHTGYLS------CCR----FLDD 156 (343)
T ss_pred -------ceeEEEEEECCCCCeEEec--CcCceeEEEecccccccccce-eeeeecCccceeE------EEE----EcCC
Confidence 2344556899999865532 22233346655543 22222 2222111 2221 111 1123
Q ss_pred eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeE
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVK 255 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~ 255 (571)
.-++++ .|-....+.|+++++. +.+.....++-.+ .++|.....|.++.-+.. ..||-+.- +. -.+-
T Consensus 157 ~~ilT~--SGD~TCalWDie~g~~~~~f~GH~gDV~sl-sl~p~~~ntFvSg~cD~~--aklWD~R~---~~----c~qt 224 (343)
T KOG0286|consen 157 NHILTG--SGDMTCALWDIETGQQTQVFHGHTGDVMSL-SLSPSDGNTFVSGGCDKS--AKLWDVRS---GQ----CVQT 224 (343)
T ss_pred CceEec--CCCceEEEEEcccceEEEEecCCcccEEEE-ecCCCCCCeEEecccccc--eeeeeccC---cc----eeEe
Confidence 333332 2455677788777654 3444445556555 378833345666655542 55554331 21 1112
Q ss_pred ec-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEE
Q 008274 256 LT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYG 334 (571)
Q Consensus 256 lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 334 (571)
.. ++...+.+.|-|+|..+ ...+... ...++|+.+..++......+ ....+....+...-++.|-..++..+..
T Consensus 225 F~ghesDINsv~ffP~G~af--atGSDD~--tcRlyDlRaD~~~a~ys~~~-~~~gitSv~FS~SGRlLfagy~d~~c~v 299 (343)
T KOG0286|consen 225 FEGHESDINSVRFFPSGDAF--ATGSDDA--TCRLYDLRADQELAVYSHDS-IICGITSVAFSKSGRLLFAGYDDFTCNV 299 (343)
T ss_pred ecccccccceEEEccCCCee--eecCCCc--eeEEEeecCCcEEeeeccCc-ccCCceeEEEcccccEEEeeecCCceeE
Confidence 22 12234566888998544 3344333 45556777777665544332 2223333444444444444333333444
Q ss_pred E
Q 008274 335 A 335 (571)
Q Consensus 335 ~ 335 (571)
|
T Consensus 300 W 300 (343)
T KOG0286|consen 300 W 300 (343)
T ss_pred e
Confidence 4
No 320
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.77 E-value=0.26 Score=49.99 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=79.4
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cchh--hhHHHH------hCCcEEEEECC
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDM--RAQYLR------SKGILVWKLDN 391 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~--~~~~l~------~~G~~v~~~d~ 391 (571)
+.+....+..+..|++..... ++..|+||++-|||+.+.+...+.. -+.. -...|. .+--.++.+|.
T Consensus 49 v~v~~~~~~~LFYwf~eS~~~---P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESENN---PETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred EECCCCCCceEEEEEEEccCC---CCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 444445678898888876542 2557999999999998754322210 0000 000111 11134666776
Q ss_pred C-CCCCChhhhHHHHhccCCCCCchhHHHH-HHHHHHcCCCcCCcEEEEeechHHHHHHHHHh----cCC------CeeE
Q 008274 392 R-GTARRGLKFEASIKHNCGRIDAEDQLTG-AEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA----RFP------DVFQ 459 (571)
Q Consensus 392 r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~----~~~------~~~~ 459 (571)
| |.|.+=.. ........-....+|...+ .+|+.+.|.-..+.+.|.|.||+|..+-++|. .+. --++
T Consensus 126 PvGvGFSYs~-~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLk 204 (454)
T KOG1282|consen 126 PVGVGFSYSN-TSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLK 204 (454)
T ss_pred CCcCCccccC-CCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccce
Confidence 6 33322100 0000000111124566555 44666666667788999999999966655543 221 2478
Q ss_pred EEEEcCccCC
Q 008274 460 CAVSGAPVTS 469 (571)
Q Consensus 460 ~~v~~~~~~~ 469 (571)
+.+.+.|+++
T Consensus 205 G~~IGNg~td 214 (454)
T KOG1282|consen 205 GYAIGNGLTD 214 (454)
T ss_pred EEEecCcccC
Confidence 8899998876
No 321
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=94.67 E-value=0.81 Score=42.83 Aligned_cols=201 Identities=10% Similarity=0.093 Sum_probs=86.5
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE-eecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~-~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
+..+..+.||-|...++.-+..+ .|-+..+.||.|-+-.+ ....+- .+.++ +.++..++- .+
T Consensus 263 d~aVlci~FSRDsEMlAsGsqDG----kIKvWri~tG~ClRrFdrAHtkGv----t~l~F-----SrD~SqiLS----~s 325 (508)
T KOG0275|consen 263 DDAVLCISFSRDSEMLASGSQDG----KIKVWRIETGQCLRRFDRAHTKGV----TCLSF-----SRDNSQILS----AS 325 (508)
T ss_pred ccceEEEeecccHHHhhccCcCC----cEEEEEEecchHHHHhhhhhccCe----eEEEE-----ccCcchhhc----cc
Confidence 44556678888877555433333 25555567777532211 100000 00111 011111221 13
Q ss_pred ccEEEEE-eCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 187 FRHLYLH-DINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 187 ~~~l~~~-~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
+.+..++ .+.+|+ .+.+-....-+... .+++||.+|.-.+++.. ..+|.... +. -+...+.+..+-...+
T Consensus 326 fD~tvRiHGlKSGK~LKEfrGHsSyvn~a-~ft~dG~~iisaSsDgt---vkvW~~Kt---te-C~~Tfk~~~~d~~vns 397 (508)
T KOG0275|consen 326 FDQTVRIHGLKSGKCLKEFRGHSSYVNEA-TFTDDGHHIISASSDGT---VKVWHGKT---TE-CLSTFKPLGTDYPVNS 397 (508)
T ss_pred ccceEEEeccccchhHHHhcCccccccce-EEcCCCCeEEEecCCcc---EEEecCcc---hh-hhhhccCCCCccccee
Confidence 4444444 344443 23333322233444 48999988877665443 55554321 10 0001111111111233
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCC-CCCeEEEEEcCCCcEEEEEEEc
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQL-EPPDIVQIQANDGTVLYGALYK 338 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~ 338 (571)
+.+-|....-..+|.. ...+|++++ .|..++......-....+....+ +.-+.+.....|+. +.++.+.
T Consensus 398 v~~~PKnpeh~iVCNr---sntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~v-lYCF~~~ 467 (508)
T KOG0275|consen 398 VILLPKNPEHFIVCNR---SNTVYIMNM-QGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGV-LYCFSVL 467 (508)
T ss_pred EEEcCCCCceEEEEcC---CCeEEEEec-cceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcE-EEEEEee
Confidence 4444543222223322 236888776 66666665543333333433333 33455555555554 5455444
No 322
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.64 E-value=0.067 Score=46.08 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC
Q 008274 417 QLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP 455 (571)
Q Consensus 417 ~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~ 455 (571)
+...++....+ ....+|.++|||+||.+|..++....
T Consensus 14 i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 14 VLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 44444444332 14578999999999999998887653
No 323
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.61 E-value=11 Score=43.46 Aligned_cols=121 Identities=7% Similarity=0.088 Sum_probs=63.0
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC--eeecc----CCcccCCCCCccCC-CeEEEEEec
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS--WVNLH----DCFTPLDKGVTKYS-GGFIWASEK 184 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~--w~~~~----~~~~~~~~~~~~~~-d~~~~~s~~ 184 (571)
..+++.+++..++++ +..+ ..|.++|..++..+.+......+ +.... ..+. .+.....++ ++.+++++.
T Consensus 627 ~GIavd~~gn~LYVa-Dt~n--~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln-~P~gVa~dp~~g~LyVad~ 702 (1057)
T PLN02919 627 QGLAYNAKKNLLYVA-DTEN--HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLN-SPWDVCFEPVNEKVYIAMA 702 (1057)
T ss_pred cEEEEeCCCCEEEEE-eCCC--ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcC-CCeEEEEecCCCeEEEEEC
Confidence 457888887654443 3332 24888999998877664321000 00000 0000 011112344 445555543
Q ss_pred CCccEEEEEeCCCceeeceeecC--------------e-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 185 TGFRHLYLHDINGTCLGPITEGD--------------W-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~--------------~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+...|++++..++....+.... + ....+ .++++|+.||++.... ..|.++++
T Consensus 703 -~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GI-avspdG~~LYVADs~n----~~Irv~D~ 769 (1057)
T PLN02919 703 -GQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGI-SLSPDLKELYIADSES----SSIRALDL 769 (1057)
T ss_pred -CCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEE-EEeCCCCEEEEEECCC----CeEEEEEC
Confidence 4456888887666544332110 0 01123 4899999998876544 45666666
No 324
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=94.51 E-value=1.4 Score=42.13 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=69.8
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee--cCCeee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE--LDSWVN 159 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~--~~~w~~ 159 (571)
-++|++.+|+. ...+ ++....+....||.||.+++.-.-. . +|.+....+|..+.....+ +-.|..
T Consensus 88 AflW~~~~ge~-~~el-------tgHKDSVt~~~FshdgtlLATGdms--G--~v~v~~~stg~~~~~~~~e~~dieWl~ 155 (399)
T KOG0296|consen 88 AFLWDISTGEF-AGEL-------TGHKDSVTCCSFSHDGTLLATGDMS--G--KVLVFKVSTGGEQWKLDQEVEDIEWLK 155 (399)
T ss_pred EEEEEccCCcc-eeEe-------cCCCCceEEEEEccCceEEEecCCC--c--cEEEEEcccCceEEEeecccCceEEEE
Confidence 47899998872 2222 4566788999999999877764222 2 3777777877765433222 224652
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
|.|.. +++.-..+|- +|++.+.++. .+.+......+.. -.+.|||+.++....
T Consensus 156 -------------WHp~a~illAG~~DGs--vWmw~ip~~~~~kv~~Gh~~~ct~-G~f~pdGKr~~tgy~ 210 (399)
T KOG0296|consen 156 -------------WHPRAHILLAGSTDGS--VWMWQIPSQALCKVMSGHNSPCTC-GEFIPDGKRILTGYD 210 (399)
T ss_pred -------------ecccccEEEeecCCCc--EEEEECCCcceeeEecCCCCCccc-ccccCCCceEEEEec
Confidence 44443 5555555663 5555555533 3333332322222 237889998877766
No 325
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=94.47 E-value=0.19 Score=46.80 Aligned_cols=119 Identities=15% Similarity=0.205 Sum_probs=74.2
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe-eeccCCcccCCCCCccCCCeEEEEEe
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW-VNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w-~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
.+...|+..+.|++||..|+.++.... |-+.+.++++|..-.+...... ++. .-+.+ .++..|++ .+
T Consensus 345 rGHsSyvn~a~ft~dG~~iisaSsDgt----vkvW~~KtteC~~Tfk~~~~d~~vns---v~~~P----Knpeh~iV-CN 412 (508)
T KOG0275|consen 345 RGHSSYVNEATFTDDGHHIISASSDGT----VKVWHGKTTECLSTFKPLGTDYPVNS---VILLP----KNPEHFIV-CN 412 (508)
T ss_pred cCccccccceEEcCCCCeEEEecCCcc----EEEecCcchhhhhhccCCCCccccee---EEEcC----CCCceEEE-Ec
Confidence 445668889999999998887766553 6677888888754333221111 000 01111 12334444 34
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEE--EEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQI--VGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+ -..+|+++..|.-.+-+++|..+-.++ ...||.|.++|..+.+ .-+|.+..
T Consensus 413 r--sntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED-----~vlYCF~~ 466 (508)
T KOG0275|consen 413 R--SNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGED-----GVLYCFSV 466 (508)
T ss_pred C--CCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccC-----cEEEEEEe
Confidence 4 346899999998888888875443222 2489999999999743 45666665
No 326
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=94.42 E-value=0.39 Score=46.47 Aligned_cols=99 Identities=10% Similarity=0.065 Sum_probs=55.1
Q ss_pred EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec
Q 008274 178 FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT 257 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt 257 (571)
|+-. ..+|.-.||-.- -..+.++|+...|++..+- |.|.. .|++++..++. ..++ |.. .| .||.
T Consensus 195 F~t~-SdDg~ikiWdf~-~~kee~vL~GHgwdVksvd-WHP~k-gLiasgskDnl--VKlW--Dpr-Sg-------~cl~ 258 (464)
T KOG0284|consen 195 FLTC-SDDGTIKIWDFR-MPKEERVLRGHGWDVKSVD-WHPTK-GLIASGSKDNL--VKLW--DPR-SG-------SCLA 258 (464)
T ss_pred eEEe-cCCCeEEEEecc-CCchhheeccCCCCcceec-cCCcc-ceeEEccCCce--eEee--cCC-Cc-------chhh
Confidence 4433 444554555432 3455678887889998875 88754 47777766653 3333 331 12 2433
Q ss_pred CC----CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 258 NG----KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 258 ~~----~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.. ...-.+.|++++.+++-.. . .. .+.++|..+-+
T Consensus 259 tlh~HKntVl~~~f~~n~N~Llt~s-k-D~--~~kv~DiR~mk 297 (464)
T KOG0284|consen 259 TLHGHKNTVLAVKFNPNGNWLLTGS-K-DQ--SCKVFDIRTMK 297 (464)
T ss_pred hhhhccceEEEEEEcCCCCeeEEcc-C-Cc--eEEEEehhHhH
Confidence 22 1233458999998775532 2 22 55666664333
No 327
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=94.41 E-value=4.3 Score=37.85 Aligned_cols=166 Identities=15% Similarity=0.187 Sum_probs=87.2
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
.....|++.-.|.+|+. |+..+. .....+-|+++|+..+........-... .+.| + +++.|+--+ -
T Consensus 142 ~gHtgylScC~f~dD~~-ilT~SG----D~TCalWDie~g~~~~~f~GH~gDV~sl--sl~p-----~-~~ntFvSg~-c 207 (343)
T KOG0286|consen 142 AGHTGYLSCCRFLDDNH-ILTGSG----DMTCALWDIETGQQTQVFHGHTGDVMSL--SLSP-----S-DGNTFVSGG-C 207 (343)
T ss_pred cCccceeEEEEEcCCCc-eEecCC----CceEEEEEcccceEEEEecCCcccEEEE--ecCC-----C-CCCeEEecc-c
Confidence 45678999999999885 343332 2348888999998766554322211100 0111 1 223333211 1
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC---CCc
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN---GKG 261 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~---~~g 261 (571)
+....||=+. ++...+-+...+.++..+ .|.|+|.. +.++.+++ .-.+|-+.. +- +...... ..|
T Consensus 208 D~~aklWD~R-~~~c~qtF~ghesDINsv-~ffP~G~a-fatGSDD~--tcRlyDlRa--D~-----~~a~ys~~~~~~g 275 (343)
T KOG0286|consen 208 DKSAKLWDVR-SGQCVQTFEGHESDINSV-RFFPSGDA-FATGSDDA--TCRLYDLRA--DQ-----ELAVYSHDSIICG 275 (343)
T ss_pred ccceeeeecc-CcceeEeecccccccceE-EEccCCCe-eeecCCCc--eeEEEeecC--Cc-----EEeeeccCcccCC
Confidence 3344444332 334445555556566665 48888853 33444444 366665443 21 1222222 135
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
..++.||.+|+.+..-+... ...+.|...++.+-.
T Consensus 276 itSv~FS~SGRlLfagy~d~----~c~vWDtlk~e~vg~ 310 (343)
T KOG0286|consen 276 ITSVAFSKSGRLLFAGYDDF----TCNVWDTLKGERVGV 310 (343)
T ss_pred ceeEEEcccccEEEeeecCC----ceeEeeccccceEEE
Confidence 67789999998775545443 456666555554333
No 328
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=94.38 E-value=0.079 Score=44.76 Aligned_cols=53 Identities=25% Similarity=0.307 Sum_probs=34.6
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc---C----CCeeEEEEEcCccC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR---F----PDVFQCAVSGAPVT 468 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~----~~~~~~~v~~~~~~ 468 (571)
...+.+.++.+.++.. ..+|.+.|||+||.+|..++.. + +..+.+....+|-.
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 3456666666665532 4789999999999999888764 1 14566666666654
No 329
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=94.37 E-value=3.7 Score=39.90 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=63.8
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCC-CCCCc---------cccc--------CCCCCCCCceEEEEEEECC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV-GSEAQ---------EDHA--------YPFAGASNVKVRLGVVSAA 88 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~--------y~~~g~~~~~~~l~~~dl~ 88 (571)
++.|.|=...++-...++..+..+.++..+--.. .++.. -.+. ....|..| .+.+||+.
T Consensus 86 Di~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn---~v~iWnv~ 162 (472)
T KOG0303|consen 86 DIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN---TVSIWNVG 162 (472)
T ss_pred ccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc---eEEEEecc
Confidence 3568888887766556666555555544322210 00000 0001 12234444 68999999
Q ss_pred CCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 89 GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
+|+.. +++ +....+.+++|+-||.+++...... .|-++|..+|+..
T Consensus 163 tgeal-i~l--------~hpd~i~S~sfn~dGs~l~TtckDK----kvRv~dpr~~~~v 208 (472)
T KOG0303|consen 163 TGEAL-ITL--------DHPDMVYSMSFNRDGSLLCTTCKDK----KVRVIDPRRGTVV 208 (472)
T ss_pred CCcee-eec--------CCCCeEEEEEeccCCceeeeecccc----eeEEEcCCCCcEe
Confidence 99853 333 2566788899999999888775443 4888999998753
No 330
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=94.28 E-value=1.4 Score=46.33 Aligned_cols=158 Identities=10% Similarity=0.045 Sum_probs=78.5
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-Ceeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~ 160 (571)
+.+|++.+...... . .+....+..+.|+|-|-+.+.. ..++ ...+|.+|-. ...|....+..+ ...
T Consensus 475 vRLWsl~t~s~~V~-y-------~GH~~PVwdV~F~P~GyYFata-s~D~-tArLWs~d~~-~PlRifaghlsDV~cv-- 541 (707)
T KOG0263|consen 475 VRLWSLDTWSCLVI-Y-------KGHLAPVWDVQFAPRGYYFATA-SHDQ-TARLWSTDHN-KPLRIFAGHLSDVDCV-- 541 (707)
T ss_pred eeeeecccceeEEE-e-------cCCCcceeeEEecCCceEEEec-CCCc-eeeeeecccC-CchhhhcccccccceE--
Confidence 45667776544333 1 2344567778899998655554 3342 4478877762 222222222111 111
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.| .|+. ++++-..+-. +.+.|...| ..+..+.....+.... +||+|++|.--+. ++ ...+|
T Consensus 542 --~F---------HPNs~Y~aTGSsD~t--VRlWDv~~G~~VRiF~GH~~~V~al~-~Sp~Gr~LaSg~e-d~--~I~iW 604 (707)
T KOG0263|consen 542 --SF---------HPNSNYVATGSSDRT--VRLWDVSTGNSVRIFTGHKGPVTALA-FSPCGRYLASGDE-DG--LIKIW 604 (707)
T ss_pred --EE---------CCcccccccCCCCce--EEEEEcCCCcEEEEecCCCCceEEEE-EcCCCceEeeccc-CC--cEEEE
Confidence 12 2333 3333222223 334444444 4555666565666664 9999976654432 32 24554
Q ss_pred EEEeCCCCCCCCCCCeEec-CCCceEEEEECCCCCEEEE
Q 008274 239 CAKLYPDWNHTLEAPVKLT-NGKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt-~~~g~~~~~~s~~g~~~v~ 276 (571)
++. .|. ...++- +.....+.+||.||..+|-
T Consensus 605 --Dl~-~~~----~v~~l~~Ht~ti~SlsFS~dg~vLas 636 (707)
T KOG0263|consen 605 --DLA-NGS----LVKQLKGHTGTIYSLSFSRDGNVLAS 636 (707)
T ss_pred --EcC-CCc----chhhhhcccCceeEEEEecCCCEEEe
Confidence 452 222 122221 2223456799999986654
No 331
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=94.26 E-value=2.1 Score=39.74 Aligned_cols=154 Identities=10% Similarity=0.096 Sum_probs=77.8
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
++.+-+.|-||++++|-+.. . .|-+++++.+..+.-.+....
T Consensus 124 g~i~cvew~Pns~klasm~d--n-----------------------------------~i~l~~l~ess~~vaev~ss~- 165 (370)
T KOG1007|consen 124 GKINCVEWEPNSDKLASMDD--N-----------------------------------NIVLWSLDESSKIVAEVLSSE- 165 (370)
T ss_pred CceeeEEEcCCCCeeEEecc--C-----------------------------------ceEEEEcccCcchheeecccc-
Confidence 34466789999999987542 1 356677776554211111000
Q ss_pred CCCCCCceeEEEEEcc--CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--E
Q 008274 103 DQNYDEEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--F 178 (571)
Q Consensus 103 ~~~~~~~~~~~~~wsp--Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~ 178 (571)
+ ..+...+..-+||| ||..++...++. |.-+|+.|.....-.+...+.- .+.+ ...|+. +
T Consensus 166 s-~e~~~~ftsg~WspHHdgnqv~tt~d~t-----l~~~D~RT~~~~~sI~dAHgq~------vrdl----DfNpnkq~~ 229 (370)
T KOG1007|consen 166 S-AEMRHSFTSGAWSPHHDGNQVATTSDST-----LQFWDLRTMKKNNSIEDAHGQR------VRDL----DFNPNKQHI 229 (370)
T ss_pred c-ccccceecccccCCCCccceEEEeCCCc-----EEEEEccchhhhcchhhhhcce------eeec----cCCCCceEE
Confidence 0 12345667779999 787777765544 6666666543221111110000 0111 123443 5
Q ss_pred EEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 179 IWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
+....++|+-+||=........+.|....--+.. +.+.|--++|+.++..+.
T Consensus 230 lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~-VRfn~~hdqLiLs~~SDs 281 (370)
T KOG1007|consen 230 LVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWA-VRFNPEHDQLILSGGSDS 281 (370)
T ss_pred EEEcCCCccEEEEeccCCCccccccCCCceEEEE-EEecCccceEEEecCCCc
Confidence 5556668887777654333223334333222222 235666666666665443
No 332
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=94.20 E-value=6.2 Score=40.20 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=78.7
Q ss_pred EEEEEccCCe-EEEEE-EeccC------ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEE
Q 008274 112 ARVNWMHGNI-LTAQV-LNRSQ------TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWA 181 (571)
Q Consensus 112 ~~~~wspDg~-~i~~~-~~r~~------~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~ 181 (571)
....|.+-|. +|+.. ++-+. .+..||.++++ |+...+--...+.-.+ . .|++++ |.++
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhd------v-----~W~~s~~EF~Vv 288 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHD------V-----TWSPSGREFAVV 288 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEec-CceEEEecCCCCCceE------E-----EECCCCCEEEEE
Confidence 4578999998 44443 23222 25579999999 4433221111110001 1 233433 4433
Q ss_pred EecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC
Q 008274 182 SEKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG 259 (571)
Q Consensus 182 s~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~ 259 (571)
- |+ ..+-++++.+.-.-.+..|..+ ...|+|-|+.|++.+-.+-++...++-+.- .++++..
T Consensus 289 y---GfMPAkvtifnlr~~~v~df~egpRN---~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n----------~K~i~~~ 352 (566)
T KOG2315|consen 289 Y---GFMPAKVTIFNLRGKPVFDFPEGPRN---TAFFNPHGNIILLAGFGNLPGDMEVWDVPN----------RKLIAKF 352 (566)
T ss_pred E---ecccceEEEEcCCCCEeEeCCCCCcc---ceEECCCCCEEEEeecCCCCCceEEEeccc----------hhhcccc
Confidence 2 32 4566777777655555555432 224999999999998766554566654431 1233322
Q ss_pred --CceEEEEECCCCCEEEEEeeC
Q 008274 260 --KGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 260 --~g~~~~~~s~~g~~~v~~~s~ 280 (571)
.+...+.|+|||.+++-...+
T Consensus 353 ~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 353 KAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ccCCceEEEEcCCCcEEEEEecc
Confidence 234556999999998765433
No 333
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=94.18 E-value=0.28 Score=46.02 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=49.6
Q ss_pred cceeeeec--cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCc
Q 008274 14 AEYIAQEE--MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 91 (571)
Q Consensus 14 ~~~~~~~~--~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~ 91 (571)
|+|.-.=+ -+......||||||.|.-++.- . .+|-+|++.+.+
T Consensus 81 pew~ckIdeg~agls~~~WSPdgrhiL~tseF--~---------------------------------lriTVWSL~t~~ 125 (447)
T KOG4497|consen 81 PEWYCKIDEGQAGLSSISWSPDGRHILLTSEF--D---------------------------------LRITVWSLNTQK 125 (447)
T ss_pred ceeEEEeccCCCcceeeeECCCcceEeeeecc--e---------------------------------eEEEEEEeccce
Confidence 56655332 2456788999999998664421 1 256788888877
Q ss_pred eEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc
Q 008274 92 VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS 130 (571)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~ 130 (571)
...+... ...+-.+++.|||++.+..+.|+
T Consensus 126 ~~~~~~p---------K~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 126 GYLLPHP---------KTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred eEEeccc---------ccCceeEEECCCCceeeeeeccc
Confidence 7666432 22335679999999988887775
No 334
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=94.13 E-value=0.25 Score=52.07 Aligned_cols=63 Identities=16% Similarity=0.134 Sum_probs=46.6
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+..++.+|||||+|+-++.| ..|.+||+-++.....-.
T Consensus 577 nritd~~FS~DgrWlisasmD------------------------------------~tIr~wDlpt~~lID~~~----- 615 (910)
T KOG1539|consen 577 NRITDMTFSPDGRWLISASMD------------------------------------STIRTWDLPTGTLIDGLL----- 615 (910)
T ss_pred cceeeeEeCCCCcEEEEeecC------------------------------------CcEEEEeccCcceeeeEe-----
Confidence 356789999999999887665 246889999987654322
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccC
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQ 131 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~ 131 (571)
-+....++++||.|.+++.+ +.++
T Consensus 616 ----vd~~~~sls~SPngD~LAT~-Hvd~ 639 (910)
T KOG1539|consen 616 ----VDSPCTSLSFSPNGDFLATV-HVDQ 639 (910)
T ss_pred ----cCCcceeeEECCCCCEEEEE-EecC
Confidence 34556678999999988876 4443
No 335
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=94.13 E-value=3.8 Score=41.93 Aligned_cols=184 Identities=11% Similarity=0.028 Sum_probs=91.7
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE-EEEEeecCCee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-VILVEELDSWV 158 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~-~l~~~~~~~w~ 158 (571)
..+|+|+..+++++.+.- . ...+++.+.|+++|+.|+.-...+ .|.+.|.+..+.. .+.......+.
T Consensus 197 ~~vylW~~~s~~v~~l~~-------~-~~~~vtSv~ws~~G~~LavG~~~g----~v~iwD~~~~k~~~~~~~~h~~rvg 264 (484)
T KOG0305|consen 197 QSVYLWSASSGSVTELCS-------F-GEELVTSVKWSPDGSHLAVGTSDG----TVQIWDVKEQKKTRTLRGSHASRVG 264 (484)
T ss_pred ceEEEEecCCCceEEeEe-------c-CCCceEEEEECCCCCEEEEeecCC----eEEEEehhhccccccccCCcCceeE
Confidence 468999999999877743 1 267899999999999888765544 3788888764432 22221111111
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
. ++|.. ..+..-.++|....+-+.......+.+....-+|.... |++|++++.=-++++ .++
T Consensus 265 ~-----------laW~~-~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLk-ws~d~~~lASGgnDN-----~~~ 326 (484)
T KOG0305|consen 265 S-----------LAWNS-SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLK-WSPDGNQLASGGNDN-----VVF 326 (484)
T ss_pred E-----------EeccC-ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeE-ECCCCCeeccCCCcc-----ceE
Confidence 0 12332 22222333443222222222111121333445677764 999997654433332 334
Q ss_pred EEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 239 CAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
..+. .... ....++. ...+-..+|+|=-.-++.+..+ +.=..|...+..+++.+.
T Consensus 327 Iwd~--~~~~---p~~~~~~H~aAVKA~awcP~q~~lLAsGGG-s~D~~i~fwn~~~g~~i~ 382 (484)
T KOG0305|consen 327 IWDG--LSPE---PKFTFTEHTAAVKALAWCPWQSGLLATGGG-SADRCIKFWNTNTGARID 382 (484)
T ss_pred eccC--CCcc---ccEEEeccceeeeEeeeCCCccCceEEcCC-CcccEEEEEEcCCCcEec
Confidence 4443 2211 2233333 2233445788844444443322 222244444554555433
No 336
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.90 E-value=4.7 Score=40.83 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=70.1
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEE-EECCCCCCCC---hh-hh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVW-KLDNRGTARR---GL-KF 401 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~-~~d~rG~~~~---~~-~~ 401 (571)
+.+.++ .+.+-|-+ -|.|+.|++-|.-.. +.|.. .-++...|.-.+ .-|.|-.||. |. ++
T Consensus 273 ~~reEi-~yYFnPGD-----~KPPL~VYFSGyR~a----EGFEg-----y~MMk~Lg~PfLL~~DpRleGGaFYlGs~ey 337 (511)
T TIGR03712 273 SKRQEF-IYYFNPGD-----FKPPLNVYFSGYRPA----EGFEG-----YFMMKRLGAPFLLIGDPRLEGGAFYLGSDEY 337 (511)
T ss_pred CCCCee-EEecCCcC-----CCCCeEEeeccCccc----Ccchh-----HHHHHhcCCCeEEeeccccccceeeeCcHHH
Confidence 345555 33456655 355999999884322 22221 234556676554 4488855543 22 12
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+. .+++.|+...+.-..+.+.+.+-|.|||-+-|+.+++.... +|+|..=|++++
T Consensus 338 E~------------~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P--~AIiVgKPL~NL 392 (511)
T TIGR03712 338 EQ------------GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP--HAIIVGKPLVNL 392 (511)
T ss_pred HH------------HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCC--ceEEEcCcccch
Confidence 21 23444444444324578899999999999999999987432 678888888765
No 337
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.84 E-value=0.1 Score=49.78 Aligned_cols=118 Identities=14% Similarity=0.062 Sum_probs=74.6
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc--------cccchhhhhhcCCCC-------CC---hhh
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD--------GYDTFYTEKYMGLPS-------ED---PVG 491 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~g~~~-------~~---~~~ 491 (571)
..-++..|.|.|--|..+...|...|..++.+-...-+.+.+ .|...|...+..... +. ...
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL 310 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQL 310 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHH
Confidence 466789999999999999998887776543322222222211 111111111100000 01 112
Q ss_pred hccCCcchhh-----ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 492 YEYSSVMHHV-----HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 492 ~~~~s~~~~~-----~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..-.+|+... .++..|-.|+.|..|+...+.++..+++.| .....+++.|+..|..
T Consensus 311 ~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~L---PG~kaLrmvPN~~H~~ 371 (507)
T COG4287 311 LEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDL---PGEKALRMVPNDPHNL 371 (507)
T ss_pred HHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccC---CCceeeeeCCCCcchh
Confidence 2234565554 566779999999999999999998888887 5567788999999986
No 338
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.64 E-value=1.5 Score=42.70 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=57.8
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+-+.+..|.++|..+-+++.+..+.+|..++..-+.++.|............+.+.+|+++.
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 46677779999999999999999999999999999999999998766777888999999999864
No 339
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=93.46 E-value=2.7 Score=42.20 Aligned_cols=195 Identities=11% Similarity=0.046 Sum_probs=90.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCC-CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNY-DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+.+||+.+-....-.+. .|.+ ..+.+....||+-|..|+.++...| .-++|-++-+.....+. +.++-
T Consensus 190 ~v~~wDf~gMdas~~~fr----~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aq----akl~DRdG~~~~e~~KG--DQYI~ 259 (641)
T KOG0772|consen 190 TVKFWDFQGMDASMRSFR----QLQPCETHQINSLQYSVTGDQILVVSGSAQ----AKLLDRDGFEIVEFSKG--DQYIR 259 (641)
T ss_pred eEEEEecccccccchhhh----ccCcccccccceeeecCCCCeEEEEecCcc----eeEEccCCceeeeeecc--chhhh
Confidence 578899886332111010 1112 3467778899999987766655443 55566665443221111 00000
Q ss_pred c----cCCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCceeece-ee---cC-eEEEEEEEEeecCcEEEEEEc
Q 008274 160 L----HDCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTCLGPI-TE---GD-WMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 160 ~----~~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~~~~l-T~---~~-~~~~~~~~~s~dg~~l~~~~~ 228 (571)
+ .....-+.-+ .|.|+ ..++++..+|--.||-++-...+.+.+ |. +. -.+..+ .|++||+.| ..+.
T Consensus 260 Dm~nTKGHia~lt~g-~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC-~~nrdg~~i-Aagc 336 (641)
T KOG0772|consen 260 DMYNTKGHIAELTCG-CWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSC-AWNRDGKLI-AAGC 336 (641)
T ss_pred hhhccCCceeeeecc-ccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceee-ecCCCcchh-hhcc
Confidence 0 0000000000 22232 344455556777777776433333222 22 22 223445 499999873 3444
Q ss_pred CCCCceeEEEEEEeCCCCCCCCCCCeEe-cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 229 LDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 229 ~~~~~~~~l~~~~l~~~g~~~~~~~~~l-t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.+|. .|+|...- .+..+...++.- ..+.+..+++||.||++|+- .+... .+-+.++..-+
T Consensus 337 ~DGS--IQ~W~~~~--~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS-Rg~D~---tLKvWDLrq~k 397 (641)
T KOG0772|consen 337 LDGS--IQIWDKGS--RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS-RGFDD---TLKVWDLRQFK 397 (641)
T ss_pred cCCc--eeeeecCC--cccccceEeeeccCCCCceeEEEeccccchhhh-ccCCC---ceeeeeccccc
Confidence 4543 66665311 111110011111 11224556799999987743 22222 45555665444
No 340
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=93.41 E-value=6.7 Score=36.57 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=26.6
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
....++||||+..+|+....+. |..+|+.+.+.-.|
T Consensus 45 QWRkl~WSpD~tlLa~a~S~G~----i~vfdl~g~~lf~I 80 (282)
T PF15492_consen 45 QWRKLAWSPDCTLLAYAESTGT----IRVFDLMGSELFVI 80 (282)
T ss_pred hheEEEECCCCcEEEEEcCCCe----EEEEecccceeEEc
Confidence 3445799999999998865553 77788888666555
No 341
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=93.39 E-value=5.8 Score=37.04 Aligned_cols=141 Identities=13% Similarity=0.112 Sum_probs=73.5
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEE---EEeec
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVI---LVEEL 154 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l---~~~~~ 154 (571)
+++|.-.|.++++...... ++......-+.|.||.+ ..--..--..+..+||+++.+.++.... .....
T Consensus 74 kvqiv~ld~~s~e~~~~a~-------fd~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~~~~~~~~L~~~kn 146 (364)
T KOG0290|consen 74 KVQIVQLDEDSGELVEDAN-------FDHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKN 146 (364)
T ss_pred eeEEEEEccCCCceeccCC-------CCCCCCccceEecCCccccCcchhhcccCeEEEEeccCcCCceehhhhhccCcc
Confidence 3566667777777654422 34556677789999975 2111111122455799999876654421 11111
Q ss_pred CCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeC--CCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDI--NGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~--~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
..+-..-..|.+.. -++. ++-+|.-+-.=-||-+.. .+.-.+||.-.+.+|.++. |..++..+|.+...+|.
T Consensus 147 s~~~aPlTSFDWne----~dp~-~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIa-f~~~s~~~FASvgaDGS 220 (364)
T KOG0290|consen 147 SEFCAPLTSFDWNE----VDPN-LIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIA-FLKGSRDVFASVGADGS 220 (364)
T ss_pred cccCCccccccccc----CCcc-eeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEE-eccCccceEEEecCCCc
Confidence 11111111122211 1222 443443332223333332 2223577777777888886 88888888888777764
No 342
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=93.38 E-value=2.1 Score=46.02 Aligned_cols=55 Identities=7% Similarity=0.049 Sum_probs=38.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.|-+.+++.+...... .+.+..+..+.+.|.|.++|..+-.++ ++.+|+++|...
T Consensus 119 ~vK~~~~~D~s~~~~l--------rgh~apVl~l~~~p~~~fLAvss~dG~----v~iw~~~~~~~~ 173 (933)
T KOG1274|consen 119 AVKLLNLDDSSQEKVL--------RGHDAPVLQLSYDPKGNFLAVSSCDGK----VQIWDLQDGILS 173 (933)
T ss_pred eEEEEeccccchheee--------cccCCceeeeeEcCCCCEEEEEecCce----EEEEEcccchhh
Confidence 4566666653322221 346778889999999999988876653 888899988753
No 343
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=93.27 E-value=2.4 Score=42.51 Aligned_cols=61 Identities=18% Similarity=0.207 Sum_probs=37.7
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
.+.+.+||||.+||..+.|.. ..||.+|..+.+..++..-
T Consensus 450 ls~v~ysp~G~~lAvgs~d~~----------------------------------iyiy~Vs~~g~~y~r~~k~------ 489 (626)
T KOG2106|consen 450 LSVVRYSPDGAFLAVGSHDNH----------------------------------IYIYRVSANGRKYSRVGKC------ 489 (626)
T ss_pred eEEEEEcCCCCEEEEecCCCe----------------------------------EEEEEECCCCcEEEEeeee------
Confidence 567889999999988654411 1234444444444443221
Q ss_pred CCCCceeEEEEEccCCeEEEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVL 127 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~ 127 (571)
...++....||+|++++...+
T Consensus 490 --~gs~ithLDwS~Ds~~~~~~S 510 (626)
T KOG2106|consen 490 --SGSPITHLDWSSDSQFLVSNS 510 (626)
T ss_pred --cCceeEEeeecCCCceEEecc
Confidence 126788899999998765543
No 344
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=93.16 E-value=8 Score=36.71 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=37.9
Q ss_pred EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCCceEEEEECCCCCEEEEEeeCCCCCCEE
Q 008274 209 MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRI 287 (571)
Q Consensus 209 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l 287 (571)
-+... .|-+||+.|| ++.+.. ..|-..++..... ++-...+-. +.+...-+...|+|.+++ +..+-..+
T Consensus 252 GvThL-~~~edGn~lf-sGaRk~---dkIl~WDiR~~~~-pv~~L~rhv~~TNQRI~FDld~~~~~La----sG~tdG~V 321 (406)
T KOG2919|consen 252 GVTHL-QWCEDGNKLF-SGARKD---DKILCWDIRYSRD-PVYALERHVGDTNQRILFDLDPKGEILA----SGDTDGSV 321 (406)
T ss_pred CeeeE-EeccCcCeec-ccccCC---CeEEEEeehhccc-hhhhhhhhccCccceEEEecCCCCceee----ccCCCccE
Confidence 34444 4999999665 444443 3455555521110 111111211 123344457778887663 22344467
Q ss_pred EEEEcCC
Q 008274 288 LLCSLQD 294 (571)
Q Consensus 288 ~~~~~~~ 294 (571)
.+.++++
T Consensus 322 ~vwdlk~ 328 (406)
T KOG2919|consen 322 RVWDLKD 328 (406)
T ss_pred EEEecCC
Confidence 7777765
No 345
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=93.11 E-value=2.4 Score=38.58 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=73.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||..+|+.++- ++ ....+.....++||++|...-.+. |.-.|+++=..-.-.+.+-+ ++
T Consensus 166 tVRLWD~rTgt~v~s-L~--------~~s~VtSlEvs~dG~ilTia~gss-----V~Fwdaksf~~lKs~k~P~n--V~- 228 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQS-LE--------FNSPVTSLEVSQDGRILTIAYGSS-----VKFWDAKSFGLLKSYKMPCN--VE- 228 (334)
T ss_pred ceEEEEeccCcEEEE-Ee--------cCCCCcceeeccCCCEEEEecCce-----eEEeccccccceeeccCccc--cc-
Confidence 467889888775432 21 344666778999998666553332 55556665322111111111 00
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeece-eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPI-TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~l-T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.-+..|+. +++.-..++ .+|.+|-.+++..-. .++.+.....+.++||| .+|.++++++. ..||
T Consensus 229 ---------SASL~P~k~~fVaGged~--~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdG-E~yAsGSEDGT--irlW 294 (334)
T KOG0278|consen 229 ---------SASLHPKKEFFVAGGEDF--KVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDG-ELYASGSEDGT--IRLW 294 (334)
T ss_pred ---------cccccCCCceEEecCcce--EEEEEeccCCceeeecccCCCCceEEEEECCCC-ceeeccCCCce--EEEE
Confidence 00234554 444433333 367788777654444 35544333345699998 48888888874 7888
Q ss_pred EEEe
Q 008274 239 CAKL 242 (571)
Q Consensus 239 ~~~l 242 (571)
.+..
T Consensus 295 Qt~~ 298 (334)
T KOG0278|consen 295 QTTP 298 (334)
T ss_pred EecC
Confidence 7765
No 346
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=93.06 E-value=3 Score=38.88 Aligned_cols=196 Identities=13% Similarity=0.185 Sum_probs=87.4
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~s~~~ 185 (571)
-..-++.++|.||.+.++.+.+... .|+.++.++.-.+++.- .++.+. ... ...++ .+++.+++.
T Consensus 20 ~~~e~SGLTy~pd~~tLfaV~d~~~---~i~els~~G~vlr~i~l---~g~~D~-EgI-------~y~g~~~~vl~~Er~ 85 (248)
T PF06977_consen 20 ILDELSGLTYNPDTGTLFAVQDEPG---EIYELSLDGKVLRRIPL---DGFGDY-EGI-------TYLGNGRYVLSEERD 85 (248)
T ss_dssp --S-EEEEEEETTTTEEEEEETTTT---EEEEEETT--EEEEEE----SS-SSE-EEE-------EE-STTEEEEEETTT
T ss_pred ccCCccccEEcCCCCeEEEEECCCC---EEEEEcCCCCEEEEEeC---CCCCCc-eeE-------EEECCCEEEEEEcCC
Confidence 3445889999999887777776643 59999986433333322 111110 001 12233 355555555
Q ss_pred CccEEEEEeCCC--c-----eeeceee-----cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC-CCCCC
Q 008274 186 GFRHLYLHDING--T-----CLGPITE-----GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN-HTLEA 252 (571)
Q Consensus 186 g~~~l~~~~~~~--~-----~~~~lT~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~-~~~~~ 252 (571)
+ .|+.++.+. . +.+.++- ++..++.+. |++.++.|++.. +..| ..||.++....+. .....
T Consensus 86 ~--~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla-~D~~~~~L~v~k-E~~P--~~l~~~~~~~~~~~~~~~~ 159 (248)
T PF06977_consen 86 Q--RLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLA-YDPKTNRLFVAK-ERKP--KRLYEVNGFPGGFDLFVSD 159 (248)
T ss_dssp T--EEEEEEE----TT--EEEEEEEE---S---SS--EEEE-EETTTTEEEEEE-ESSS--EEEEEEESTT-SS--EEEE
T ss_pred C--cEEEEEEeccccccchhhceEEecccccCCCcceEEEE-EcCCCCEEEEEe-CCCC--hhhEEEccccCccceeecc
Confidence 4 677766522 1 1222331 233456664 999999888774 4455 7899887511110 00000
Q ss_pred CeEec----CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCC
Q 008274 253 PVKLT----NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQAND 328 (571)
Q Consensus 253 ~~~lt----~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d 328 (571)
...+. .....+..++.|....+... |. ....|..++. +|+....+.-... ...+ ....+++|=+.+.. +
T Consensus 160 ~~~~~~~~~~~~d~S~l~~~p~t~~lliL-S~--es~~l~~~d~-~G~~~~~~~L~~g-~~gl-~~~~~QpEGIa~d~-~ 232 (248)
T PF06977_consen 160 DQDLDDDKLFVRDLSGLSYDPRTGHLLIL-SD--ESRLLLELDR-QGRVVSSLSLDRG-FHGL-SKDIPQPEGIAFDP-D 232 (248)
T ss_dssp -HHHH-HT--SS---EEEEETTTTEEEEE-ET--TTTEEEEE-T-T--EEEEEE-STT-GGG--SS---SEEEEEE-T-T
T ss_pred ccccccccceeccccceEEcCCCCeEEEE-EC--CCCeEEEECC-CCCEEEEEEeCCc-ccCc-ccccCCccEEEECC-C
Confidence 00011 00112344666755454443 33 2236777774 6664433322111 1111 24567888888885 5
Q ss_pred C
Q 008274 329 G 329 (571)
Q Consensus 329 g 329 (571)
|
T Consensus 233 G 233 (248)
T PF06977_consen 233 G 233 (248)
T ss_dssp -
T ss_pred C
Confidence 5
No 347
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=92.93 E-value=5.5 Score=37.67 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=26.5
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.+.+..+..+.|+|.+.+|+......+. .++... ++|+.+
T Consensus 52 s~Hd~~vtgvdWap~snrIvtcs~drna--yVw~~~-~~~~Wk 91 (361)
T KOG1523|consen 52 SEHDKIVTGVDWAPKSNRIVTCSHDRNA--YVWTQP-SGGTWK 91 (361)
T ss_pred hhhCcceeEEeecCCCCceeEccCCCCc--cccccC-CCCeec
Confidence 3567788889999999889988755532 234332 555543
No 348
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=92.93 E-value=8.1 Score=36.15 Aligned_cols=60 Identities=15% Similarity=-0.063 Sum_probs=38.8
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe--EEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI--LTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
-.|-+||..+-+.... +.+++.+..-.|||=.. -++.+..|+ .+|-+||++.|....+..
T Consensus 124 htlKVWDtnTlQ~a~~---------F~me~~VYshamSp~a~sHcLiA~gtr~---~~VrLCDi~SGs~sH~Ls 185 (397)
T KOG4283|consen 124 HTLKVWDTNTLQEAVD---------FKMEGKVYSHAMSPMAMSHCLIAAGTRD---VQVRLCDIASGSFSHTLS 185 (397)
T ss_pred ceEEEeecccceeeEE---------eecCceeehhhcChhhhcceEEEEecCC---CcEEEEeccCCcceeeec
Confidence 3477888877654322 34566777778999764 233333333 359999999999876544
No 349
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.90 E-value=0.17 Score=44.26 Aligned_cols=70 Identities=21% Similarity=0.133 Sum_probs=52.4
Q ss_pred hccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 501 VHKMK-GKLLLVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 501 ~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.|+ +++|-|-|+.|+++.+.|+....+.+.... .....++.|++||. |....-+..++..|.+|+.++
T Consensus 129 p~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 129 PAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred hHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 44455 688889999999999998887766554333 23445578899996 455566788999999999875
No 350
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=92.79 E-value=12 Score=37.61 Aligned_cols=39 Identities=18% Similarity=0.176 Sum_probs=26.7
Q ss_pred cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 188 ~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
..++++++++++.+.+..+-.....+ .|+++|+ +|++-+
T Consensus 164 g~i~r~~pdg~~~e~~a~G~rnp~Gl-~~d~~G~-l~~tdn 202 (367)
T TIGR02604 164 GGLFRYNPDGGKLRVVAHGFQNPYGH-SVDSWGD-VFFCDN 202 (367)
T ss_pred ceEEEEecCCCeEEEEecCcCCCccc-eECCCCC-EEEEcc
Confidence 36899999998888887664333444 4888875 455544
No 351
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.78 E-value=0.2 Score=51.68 Aligned_cols=69 Identities=22% Similarity=0.298 Sum_probs=54.5
Q ss_pred hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC--------CCeeEEEcCCCCCCCCCC-CcHHHHHHHHHHHHHH
Q 008274 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR--------KPYEILIFPDERHMPRRH-RDRIYMEERIWEFIER 569 (571)
Q Consensus 501 ~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~ 569 (571)
.++--.+++++||..|..+++..+..+++++.+.- .=+++.+.|+.+|..... ....+....+.+|.++
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 33334699999999999999999999999887653 247888999999986433 3455788889999875
No 352
>PRK02888 nitrous-oxide reductase; Validated
Probab=92.75 E-value=12 Score=39.60 Aligned_cols=18 Identities=17% Similarity=-0.001 Sum_probs=12.3
Q ss_pred ceEEECCCCCeEEEEEEe
Q 008274 26 TGYWWSLDSKFIAFTQVD 43 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~ 43 (571)
....+||||+++..++.+
T Consensus 238 d~v~~spdGk~afvTsyN 255 (635)
T PRK02888 238 DNVDTDYDGKYAFSTCYN 255 (635)
T ss_pred ccceECCCCCEEEEeccC
Confidence 456788888887665543
No 353
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=92.69 E-value=4.4 Score=45.30 Aligned_cols=174 Identities=13% Similarity=0.086 Sum_probs=83.8
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC--CceEEEE-------EeecCCeeeccCCcccCCC--------
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT--GQRKVIL-------VEELDSWVNLHDCFTPLDK-------- 169 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~--g~~~~l~-------~~~~~~w~~~~~~~~~~~~-------- 169 (571)
-+..+...+||||++.+++++++.+ |+.+.-.- =..+.|. +....+|......|+...+
T Consensus 108 vd~GI~aaswS~Dee~l~liT~~~t----ll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~ 183 (1265)
T KOG1920|consen 108 VDNGISAASWSPDEELLALITGRQT----LLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKI 183 (1265)
T ss_pred ccCceEEEeecCCCcEEEEEeCCcE----EEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccc
Confidence 4567888999999999999887653 44433211 0011221 1111245433334442211
Q ss_pred ----------------CCccCCCe-EEEEE---ecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEc
Q 008274 170 ----------------GVTKYSGG-FIWAS---EKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 170 ----------------~~~~~~d~-~~~~s---~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~ 228 (571)
..+|.+|+ ++.+| ...|-+.|-+++.+| . -+.++..- .......|-|.|..+.....
T Consensus 184 ~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg-~-Lns~se~~~~l~~~LsWkPsgs~iA~iq~ 261 (1265)
T KOG1920|consen 184 EKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDREG-A-LNSTSEPVEGLQHSLSWKPSGSLIAAIQC 261 (1265)
T ss_pred cccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEecccc-h-hhcccCcccccccceeecCCCCeEeeeee
Confidence 13677777 44443 335557888888763 2 22232211 11223458888877766665
Q ss_pred CCCCceeEEEEEEeCCCCC-CCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 229 LDGPLESHLYCAKLYPDWN-HTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 229 ~~~~~~~~l~~~~l~~~g~-~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
..+. ..|..+.- .|- +. .-..+.+.+.. .....|+.++.-++...+... -..+++...
T Consensus 262 ~~sd--~~IvffEr--NGL~hg-~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e-~~~v~lwt~ 321 (1265)
T KOG1920|consen 262 KTSD--SDIVFFER--NGLRHG-EFVLPFPLDEKEVEELAWNSNSDILAVVTSNLE-NSLVQLWTT 321 (1265)
T ss_pred cCCC--CcEEEEec--CCcccc-ccccCCcccccchheeeecCCCCceeeeecccc-cceEEEEEe
Confidence 4432 23333332 121 00 01111222222 445577777777766554432 223444443
No 354
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=92.68 E-value=0.18 Score=46.76 Aligned_cols=52 Identities=21% Similarity=0.165 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-----CCeeEEEEEcCccC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-----PDVFQCAVSGAPVT 468 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-----~~~~~~~v~~~~~~ 468 (571)
.++...++.+.++. ...++.+.|||+||.+|..++... +..+.+....+|..
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 34455555554442 356899999999999998877642 33456665566544
No 355
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=92.67 E-value=0.19 Score=45.05 Aligned_cols=72 Identities=11% Similarity=-0.050 Sum_probs=45.6
Q ss_pred CCcEEEEECCCCCCCChhh-hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC
Q 008274 382 KGILVWKLDNRGTARRGLK-FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 454 (571)
Q Consensus 382 ~G~~v~~~d~rG~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~ 454 (571)
.-..|++|=||=..-.... -.........+..+.|+.+|.++.+++.. +...++|+|||.|+.+...++.++
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3467888888743211100 00000111123357899999998887642 456899999999999999998763
No 356
>PLN02454 triacylglycerol lipase
Probab=92.61 E-value=0.32 Score=48.36 Aligned_cols=55 Identities=20% Similarity=0.170 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCccCC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPVTS 469 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~~~ 469 (571)
+++.+.++.+.++..-..-+|.+.|||+||.+|+.+|... ...+.+....+|-..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 4566777777765321223599999999999999887531 112455556666544
No 357
>PLN02633 palmitoyl protein thioesterase family protein
Probab=92.60 E-value=0.61 Score=44.31 Aligned_cols=103 Identities=14% Similarity=0.016 Sum_probs=56.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
.+.|+|| .||-+.... ......+.+.+.+ -|.-+.++.. |.+ ....|.... -+.+..+.+.+.
T Consensus 24 ~~~P~Vi-wHG~GD~c~-----~~g~~~~~~l~~~~~g~~~~~i~i-g~~-~~~s~~~~~--------~~Qve~vce~l~ 87 (314)
T PLN02633 24 VSVPFIM-LHGIGTQCS-----DATNANFTQLLTNLSGSPGFCLEI-GNG-VGDSWLMPL--------TQQAEIACEKVK 87 (314)
T ss_pred CCCCeEE-ecCCCcccC-----CchHHHHHHHHHhCCCCceEEEEE-CCC-ccccceeCH--------HHHHHHHHHHHh
Confidence 4678877 599543321 1234445666654 3555555533 222 111111111 122333344444
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAP 466 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~ 466 (571)
+.+... +-+.++|+|.||.++-.++.+.|+ .++-.|+.++
T Consensus 88 ~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 88 QMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred hchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 433222 469999999999999999888776 3677777654
No 358
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=92.45 E-value=8.9 Score=35.43 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=65.4
Q ss_pred eecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC
Q 008274 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 89 (571)
Q Consensus 10 ~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~ 89 (571)
||-.=|.++.--.+....+|+|-||.+|-=-.-..+. .+.... . ..-.+...|... ..+.+||+++
T Consensus 18 yN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGa--vW~~Di-d---------~~s~~liTGSAD--~t~kLWDv~t 83 (327)
T KOG0643|consen 18 YNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGA--VWCCDI-D---------WDSKHLITGSAD--QTAKLWDVET 83 (327)
T ss_pred ecCCCcEEEEecCCCCceEEEecCCceeeeecCCCce--EEEEEe-c---------CCcceeeecccc--ceeEEEEcCC
Confidence 5667788888777788899999999998321111111 111100 0 000111223222 2467899999
Q ss_pred CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec-cCccEEEEEEECC
Q 008274 90 GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR-SQTKLKVLKFDIK 142 (571)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r-~~~~~~i~~~d~~ 142 (571)
|+.... .+....+-.+.|+++|.+++++++. ......|..+|+.
T Consensus 84 Gk~la~---------~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~ 128 (327)
T KOG0643|consen 84 GKQLAT---------WKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIR 128 (327)
T ss_pred CcEEEE---------eecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEcc
Confidence 976533 2345567778999999977766543 4455567777776
No 359
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=92.24 E-value=6.6 Score=37.87 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=79.5
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecC-Ce
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELD-SW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~-~w 157 (571)
.+||+||+..-+.. .++... .+....+...+.++.+.++++=..+. ..+|+++|+.+-+... |..+.+. ..
T Consensus 106 e~IyIydI~~MklL-hTI~t~----~~n~~gl~AlS~n~~n~ylAyp~s~t--~GdV~l~d~~nl~~v~~I~aH~~~lAa 178 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLL-HTIETT----PPNPKGLCALSPNNANCYLAYPGSTT--SGDVVLFDTINLQPVNTINAHKGPLAA 178 (391)
T ss_pred ccEEEEecccceee-hhhhcc----CCCccceEeeccCCCCceEEecCCCC--CceEEEEEcccceeeeEEEecCCceeE
Confidence 35899999875432 122210 12344566667777777888865554 4468999998766543 3322222 11
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEecCC-ccEEEEEeCCCceeeceeecCeEE--EEEEEEeecCcEEEEEEcCCCCc
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEKTG-FRHLYLHDINGTCLGPITEGDWMV--EQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g-~~~l~~~~~~~~~~~~lT~~~~~~--~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
+ ..+++| ++.++...| .-+++.+ .+|....++=+|-.-+ -++ .|++|+..|..+++.+-
T Consensus 179 l-------------afs~~G~llATASeKGTVIRVf~v-~~G~kl~eFRRG~~~~~IySL-~Fs~ds~~L~~sS~TeT-- 241 (391)
T KOG2110|consen 179 L-------------AFSPDGTLLATASEKGTVIRVFSV-PEGQKLYEFRRGTYPVSIYSL-SFSPDSQFLAASSNTET-- 241 (391)
T ss_pred E-------------EECCCCCEEEEeccCceEEEEEEc-CCccEeeeeeCCceeeEEEEE-EECCCCCeEEEecCCCe--
Confidence 1 224555 554444444 3333333 3454555665665433 334 59999998888877654
Q ss_pred eeEEEEEEe
Q 008274 234 ESHLYCAKL 242 (571)
Q Consensus 234 ~~~l~~~~l 242 (571)
.|+++++.
T Consensus 242 -VHiFKL~~ 249 (391)
T KOG2110|consen 242 -VHIFKLEK 249 (391)
T ss_pred -EEEEEecc
Confidence 89999875
No 360
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=92.20 E-value=11 Score=39.99 Aligned_cols=149 Identities=12% Similarity=0.058 Sum_probs=74.3
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
..-+-.+.+|.|...++.-++. . |-..+.+++++ ++++.. ++ ....|- .+|..+++.-+.|
T Consensus 373 R~dVRsl~vS~d~~~~~Sga~~---S--ikiWn~~t~kciRTi~~~----y~-l~~~Fv--------pgd~~Iv~G~k~G 434 (888)
T KOG0306|consen 373 RSDVRSLCVSSDSILLASGAGE---S--IKIWNRDTLKCIRTITCG----YI-LASKFV--------PGDRYIVLGTKNG 434 (888)
T ss_pred hhheeEEEeecCceeeeecCCC---c--EEEEEccCcceeEEeccc----cE-EEEEec--------CCCceEEEeccCC
Confidence 3345667889887644433222 2 66667887765 344332 11 011122 2455777766777
Q ss_pred ccEEEEEeCCCceeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC--CCCC----CCCCeEecCC
Q 008274 187 FRHLYLHDINGTCLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD--WNHT----LEAPVKLTNG 259 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~--g~~~----~~~~~~lt~~ 259 (571)
--+ ++++.+...-..+. .+..+.++ ..+||++..+..+.+.- ..+|...+..+ |..+ +...+.|--.
T Consensus 435 el~--vfdlaS~~l~Eti~AHdgaIWsi-~~~pD~~g~vT~saDkt---VkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ 508 (888)
T KOG0306|consen 435 ELQ--VFDLASASLVETIRAHDGAIWSI-SLSPDNKGFVTGSADKT---VKFWDFKLVVSVPGTQKKVLSLKHTRTLELE 508 (888)
T ss_pred ceE--EEEeehhhhhhhhhccccceeee-eecCCCCceEEecCCcE---EEEEeEEEEeccCcccceeeeeccceEEecc
Confidence 433 44444433222222 22223333 47788877665554433 44444333211 2210 0011233333
Q ss_pred CceEEEEECCCCCEEEEEeeC
Q 008274 260 KGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~ 280 (571)
+....+++||||++++..--+
T Consensus 509 ddvL~v~~Spdgk~LaVsLLd 529 (888)
T KOG0306|consen 509 DDVLCVSVSPDGKLLAVSLLD 529 (888)
T ss_pred ccEEEEEEcCCCcEEEEEecc
Confidence 445667999999999876544
No 361
>PLN02606 palmitoyl-protein thioesterase
Probab=91.93 E-value=0.99 Score=42.91 Aligned_cols=103 Identities=11% Similarity=-0.083 Sum_probs=54.8
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
.+.|+|| .||-+.... ...+..+.+.+.+ .|+-+.++- .|.+ ....|. .+ .-+.+..+.+.+.
T Consensus 25 ~~~PvVi-wHGlgD~~~-----~~~~~~~~~~i~~~~~~pg~~v~-ig~~-~~~s~~----~~----~~~Qv~~vce~l~ 88 (306)
T PLN02606 25 LSVPFVL-FHGFGGECS-----NGKVSNLTQFLINHSGYPGTCVE-IGNG-VQDSLF----MP----LRQQASIACEKIK 88 (306)
T ss_pred CCCCEEE-ECCCCcccC-----CchHHHHHHHHHhCCCCCeEEEE-ECCC-cccccc----cC----HHHHHHHHHHHHh
Confidence 4678877 699542211 1234555666652 365444443 2221 100110 11 0122333444444
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAP 466 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~ 466 (571)
+.+... +-+.++|+|.||.++-.++.+.|+ .++-.|+.++
T Consensus 89 ~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 89 QMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred cchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 433322 469999999999999999888766 3666666543
No 362
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=91.92 E-value=2.2 Score=42.70 Aligned_cols=157 Identities=8% Similarity=-0.003 Sum_probs=83.1
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.+|||......+ +++ +.......+..|+||..|+.- .- ++-+--.|+.+|. ++-+.. +..
T Consensus 533 I~vwDLhnq~~Vr-qfq-------GhtDGascIdis~dGtklWTG--Gl--DntvRcWDlregr--qlqqhd---F~S-- 593 (705)
T KOG0639|consen 533 IAVWDLHNQTLVR-QFQ-------GHTDGASCIDISKDGTKLWTG--GL--DNTVRCWDLREGR--QLQQHD---FSS-- 593 (705)
T ss_pred EEEEEcccceeee-ccc-------CCCCCceeEEecCCCceeecC--CC--ccceeehhhhhhh--hhhhhh---hhh--
Confidence 5788888654432 221 233455668889999866542 21 1123334555543 221110 000
Q ss_pred CCcccCCCCCccCC--CeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 162 DCFTPLDKGVTKYS--GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 162 ~~~~~~~~~~~~~~--d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.+|+- ...+ |.+.+-.+ ..+++++...+.+.-+|+..+.-+-+. .|++-|++.+-++. ++ ..+.|+
T Consensus 594 QIfSL-----g~cP~~dWlavGMe---ns~vevlh~skp~kyqlhlheScVLSl-KFa~cGkwfvStGk-Dn--lLnawr 661 (705)
T KOG0639|consen 594 QIFSL-----GYCPTGDWLAVGME---NSNVEVLHTSKPEKYQLHLHESCVLSL-KFAYCGKWFVSTGK-DN--LLNAWR 661 (705)
T ss_pred hheec-----ccCCCccceeeecc---cCcEEEEecCCccceeecccccEEEEE-EecccCceeeecCc-hh--hhhhcc
Confidence 01111 1122 22333222 346777777788888888877555555 48888875544433 33 277788
Q ss_pred EEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEE
Q 008274 240 AKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~ 276 (571)
..- +. .+.+.....-..++.+|.|.+++|-
T Consensus 662 tPy--Ga-----siFqskE~SsVlsCDIS~ddkyIVT 691 (705)
T KOG0639|consen 662 TPY--GA-----SIFQSKESSSVLSCDISFDDKYIVT 691 (705)
T ss_pred Ccc--cc-----ceeeccccCcceeeeeccCceEEEe
Confidence 775 33 3444444334556788888877653
No 363
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=91.71 E-value=1.1 Score=42.20 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=47.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHH-HHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT-GAEW 423 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~ 423 (571)
.+.|+|| .||-+.+... ...+..+...+.+ -|.-|.+++.- .+.. .+.......+ +.+..+ +.+.
T Consensus 4 ~~~PvVi-wHGmGD~~~~----~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~-~D~~~s~f~~-----v~~Qv~~vc~~ 71 (279)
T PF02089_consen 4 SPLPVVI-WHGMGDSCCN----PSSMGSIKELIEEQHPGTYVHSIEIG-NDPS-EDVENSFFGN-----VNDQVEQVCEQ 71 (279)
T ss_dssp SS--EEE-E--TT--S------TTTHHHHHHHHHHHSTT--EEE--SS-SSHH-HHHHHHHHSH-----HHHHHHHHHHH
T ss_pred CCCcEEE-EEcCccccCC----hhHHHHHHHHHHHhCCCceEEEEEEC-CCcc-hhhhhhHHHH-----HHHHHHHHHHH
Confidence 4678877 5995433210 1122333333332 48888888752 2211 1111111122 333333 3333
Q ss_pred HHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCcc
Q 008274 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPV 467 (571)
Q Consensus 424 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~ 467 (571)
+.+.+... +-+.++|+|.||.+.-.++.+.|+ .++-.|+.++.
T Consensus 72 l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 72 LANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred HhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 43333322 579999999999999888887654 46777776543
No 364
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=91.61 E-value=14 Score=39.08 Aligned_cols=203 Identities=14% Similarity=0.146 Sum_probs=100.7
Q ss_pred cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCC
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG 101 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~ 101 (571)
+...+.++||++|+.|+-+..+ .+-..|+++++.. +... .
T Consensus 19 iYtGG~~~~s~nG~~L~t~~~d-------------------------------------~Vi~idv~t~~~~-l~s~--~ 58 (775)
T KOG0319|consen 19 IYTGGPVAWSSNGQHLYTACGD-------------------------------------RVIIIDVATGSIA-LPSG--S 58 (775)
T ss_pred eecCCceeECCCCCEEEEecCc-------------------------------------eEEEEEccCCcee-cccC--C
Confidence 4444558999999988654322 3566788887763 2111 1
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEe--ecCCeeeccCCcccCCCCCccCCCe-E
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE--ELDSWVNLHDCFTPLDKGVTKYSGG-F 178 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~--~~~~w~~~~~~~~~~~~~~~~~~d~-~ 178 (571)
.+....+....-+||++.++.+ .|.+ .|-.+.+.+|+..+.-+. +.+.. .- ..++.+ +
T Consensus 59 ---~ed~d~ita~~l~~d~~~L~~a-~rs~---llrv~~L~tgk~irswKa~He~Pvi-------~m-----a~~~~g~L 119 (775)
T KOG0319|consen 59 ---NEDEDEITALALTPDEEVLVTA-SRSQ---LLRVWSLPTGKLIRSWKAIHEAPVI-------TM-----AFDPTGTL 119 (775)
T ss_pred ---ccchhhhheeeecCCccEEEEe-eccc---eEEEEEcccchHhHhHhhccCCCeE-------EE-----EEcCCCce
Confidence 1234567778899998766655 4443 366667777754332221 11100 00 112222 3
Q ss_pred EEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcE-EEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 179 IWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQ-VYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
+....-+|. +-+.|..++.. ..+-.....+.... |.|+-++ +.+++..++ .++..++.. .. . ++
T Consensus 120 lAtggaD~~--v~VWdi~~~~~th~fkG~gGvVssl~-F~~~~~~~lL~sg~~D~----~v~vwnl~~-~~-----t-cl 185 (775)
T KOG0319|consen 120 LATGGADGR--VKVWDIKNGYCTHSFKGHGGVVSSLL-FHPHWNRWLLASGATDG----TVRVWNLND-KR-----T-CL 185 (775)
T ss_pred EEeccccce--EEEEEeeCCEEEEEecCCCceEEEEE-eCCccchhheeecCCCc----eEEEEEccc-Cc-----h-HH
Confidence 333222333 33444444432 23332233455554 6665544 445544443 455556621 11 1 22
Q ss_pred cC----CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 257 TN----GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 257 t~----~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
-. .....+..+++|+..++.+... -.+++.++.+-+..+.+
T Consensus 186 ~~~~~H~S~vtsL~~~~d~~~~ls~~RD----kvi~vwd~~~~~~l~~l 230 (775)
T KOG0319|consen 186 HTMILHKSAVTSLAFSEDSLELLSVGRD----KVIIVWDLVQYKKLKTL 230 (775)
T ss_pred HHHHhhhhheeeeeeccCCceEEEeccC----cEEEEeehhhhhhhhee
Confidence 11 1123345788888766554322 25666676555544433
No 365
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=91.55 E-value=13 Score=35.54 Aligned_cols=166 Identities=13% Similarity=0.098 Sum_probs=87.4
Q ss_pred eEEEEEecCCccEEEEEeCCCcee-eceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCL-GPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
.+++++.|.|.. ++++|..+++. ..++.+ ...+-.-..||+||++||.+-++....+--|-..+.. .+- .+..
T Consensus 18 ~avafaRRPG~~-~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~-~~~---~ri~ 92 (305)
T PF07433_consen 18 EAVAFARRPGTF-ALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA-RGY---RRIG 92 (305)
T ss_pred eEEEEEeCCCcE-EEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc-CCc---EEEe
Confidence 366677777754 56677666654 455443 3344333348999999999988654334444444552 111 1222
Q ss_pred Ee-cCCCceEEEEECCCCCEEEEEeeCC-CCC-------------CEEEEEEcCCCceeEeccCCCCChhhhccCCCCCC
Q 008274 255 KL-TNGKGKHVAVLDHNMRNFVDFHDSL-DSP-------------PRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPP 319 (571)
Q Consensus 255 ~l-t~~~g~~~~~~s~~g~~~v~~~s~~-~~p-------------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 319 (571)
.. +.+-|-|...+.|||+.+|..-..- +.| |.|..++..+|+.+.+.. +.+... ....
T Consensus 93 E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~----Lp~~~~---~lSi 165 (305)
T PF07433_consen 93 EFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVE----LPPDLH---QLSI 165 (305)
T ss_pred EecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeee----cCcccc---ccce
Confidence 22 3344567778999997776532221 222 455556555665433211 111111 1233
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPC 360 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~ 360 (571)
+.+.+.. +|..+.+.-|..+. ...|-+|.+|....
T Consensus 166 RHLa~~~-~G~V~~a~Q~qg~~-----~~~~PLva~~~~g~ 200 (305)
T PF07433_consen 166 RHLAVDG-DGTVAFAMQYQGDP-----GDAPPLVALHRRGG 200 (305)
T ss_pred eeEEecC-CCcEEEEEecCCCC-----CccCCeEEEEcCCC
Confidence 4454444 67777777666543 22344555665433
No 366
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=91.27 E-value=15 Score=35.55 Aligned_cols=122 Identities=16% Similarity=0.099 Sum_probs=70.4
Q ss_pred eeeeeeeeecccceeeeec--cCCCceEEECCCCCeEEEE--------EEeCCCCCeEEEeecCCCCCCCCCcccccC--
Q 008274 3 LAFHVLQTHGLAEYIAQEE--MDRKTGYWWSLDSKFIAFT--------QVDSSEIPRFRIMHQGKSSVGSEAQEDHAY-- 70 (571)
Q Consensus 3 ~~~~~~~~~g~~~~~~~~~--~~~~~~~~wSPDg~~iay~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-- 70 (571)
+||--++.+|. |+++-- .++.....||-||.+||=- -.-+++-....+.... ...+.+..
T Consensus 87 ~AflW~~~~ge--~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~------~dieWl~WHp 158 (399)
T KOG0296|consen 87 LAFLWDISTGE--FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEV------EDIEWLKWHP 158 (399)
T ss_pred eEEEEEccCCc--ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeeccc------CceEEEEecc
Confidence 68889999998 666542 3566788899999988651 1111221222221011 11111111
Q ss_pred ----CCCCCCCceEEEEEEECCCC-ceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 71 ----PFAGASNVKVRLGVVSAAGG-PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 71 ----~~~g~~~~~~~l~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
-..|...+ .+|+|.+.++ ..+.+ .+.......-.+.||||+++...... .|...|+++|+
T Consensus 159 ~a~illAG~~DG--svWmw~ip~~~~~kv~---------~Gh~~~ct~G~f~pdGKr~~tgy~dg----ti~~Wn~ktg~ 223 (399)
T KOG0296|consen 159 RAHILLAGSTDG--SVWMWQIPSQALCKVM---------SGHNSPCTCGEFIPDGKRILTGYDDG----TIIVWNPKTGQ 223 (399)
T ss_pred cccEEEeecCCC--cEEEEECCCcceeeEe---------cCCCCCcccccccCCCceEEEEecCc----eEEEEecCCCc
Confidence 12233332 4788888874 33333 22334455568999999887665433 38888999997
Q ss_pred eE
Q 008274 146 RK 147 (571)
Q Consensus 146 ~~ 147 (571)
.-
T Consensus 224 p~ 225 (399)
T KOG0296|consen 224 PL 225 (399)
T ss_pred ee
Confidence 54
No 367
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=91.24 E-value=0.87 Score=32.12 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=25.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCC-CCCCCCCceEEEEEcCCCCce
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDE-SRYGPPPYKTLISVYGGPCVQ 362 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~-~~~~~~~~P~vv~~hGg~~~~ 362 (571)
..|...+.+.||..|..+-+.+.. .....++.|+|++.||-..+.
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 668999999999989888776654 212335778999999965543
No 368
>PLN02408 phospholipase A1
Probab=91.13 E-value=0.31 Score=47.72 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+.+.+.++.+.++..-...+|.|.|||+||.+|..++..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345566666666532123469999999999999988764
No 369
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=90.92 E-value=19 Score=36.25 Aligned_cols=164 Identities=10% Similarity=0.025 Sum_probs=91.9
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~ 188 (571)
.-..+.++||++.+....... ....+..+|..++....-. ..+ . .| .....++++ .++..+ .+-.
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~-~~~~vsvid~~t~~~~~~~--~vG-~-------~P--~~~a~~p~g~~vyv~~-~~~~ 182 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGN-GNNTVSVIDAATNKVTATI--PVG-N-------TP--TGVAVDPDGNKVYVTN-SDDN 182 (381)
T ss_pred CCceEEECCCCCEEEEEeccc-CCceEEEEeCCCCeEEEEE--ecC-C-------Cc--ceEEECCCCCeEEEEe-cCCC
Confidence 445689999998665554332 3346999999988654321 111 1 01 111224444 455555 4456
Q ss_pred EEEEEeCCCceeeceeec-----CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe--cCCC-
Q 008274 189 HLYLHDINGTCLGPITEG-----DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL--TNGK- 260 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l--t~~~- 260 (571)
.|..++..+....+ ... .........++++|+.+|..-.... ...+.+++.. .. ..... +...
T Consensus 183 ~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~--~~~v~~id~~--~~----~v~~~~~~~~~~ 253 (381)
T COG3391 183 TVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG--SNNVLKIDTA--TG----NVTATDLPVGSG 253 (381)
T ss_pred eEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCC--CceEEEEeCC--Cc----eEEEeccccccC
Confidence 68888876665543 111 1111122348999998888876543 3677787772 22 12221 2222
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
......++|+|+++....+. ...+++++.......+
T Consensus 254 ~~~~v~~~p~g~~~yv~~~~---~~~V~vid~~~~~v~~ 289 (381)
T COG3391 254 APRGVAVDPAGKAAYVANSQ---GGTVSVIDGATDRVVK 289 (381)
T ss_pred CCCceeECCCCCEEEEEecC---CCeEEEEeCCCCceee
Confidence 12345889999876554333 5688898876665443
No 370
>PLN02571 triacylglycerol lipase
Probab=90.91 E-value=0.33 Score=48.29 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+++.+.++.+.++..-..-+|.+.|||+||.+|+.+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 446666666665421122379999999999999988764
No 371
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=90.81 E-value=12 Score=33.55 Aligned_cols=172 Identities=20% Similarity=0.260 Sum_probs=86.0
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE--EEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV--ILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~--l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~ 185 (571)
.+.+...+|||+|.+|+.-+|.. ...+..+|.+|-+..- +.-.-.++-+ ..+.++.. .+..+-+..|-..
T Consensus 89 kgsiyc~~ws~~geliatgsndk--~ik~l~fn~dt~~~~g~dle~nmhdgti---rdl~fld~---~~s~~~il~s~ga 160 (350)
T KOG0641|consen 89 KGSIYCTAWSPCGELIATGSNDK--TIKVLPFNADTCNATGHDLEFNMHDGTI---RDLAFLDD---PESGGAILASAGA 160 (350)
T ss_pred CccEEEEEecCccCeEEecCCCc--eEEEEecccccccccCcceeeeecCCce---eeeEEecC---CCcCceEEEecCC
Confidence 34667789999999888766544 2345566666543221 1000000111 01122221 1233455566667
Q ss_pred CccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC---CCc
Q 008274 186 GFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN---GKG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~---~~g 261 (571)
|--+||..|-..++ ...+......+-...+|+ +.++.+++.+.. ...|-+.+ .. -+..|-. +.|
T Consensus 161 gdc~iy~tdc~~g~~~~a~sghtghilalyswn---~~m~~sgsqdkt--irfwdlrv--~~-----~v~~l~~~~~~~g 228 (350)
T KOG0641|consen 161 GDCKIYITDCGRGQGFHALSGHTGHILALYSWN---GAMFASGSQDKT--IRFWDLRV--NS-----CVNTLDNDFHDGG 228 (350)
T ss_pred CcceEEEeecCCCCcceeecCCcccEEEEEEec---CcEEEccCCCce--EEEEeeec--cc-----eeeeccCcccCCC
Confidence 77889998865554 345555454555665664 456666665432 22222222 10 1111111 112
Q ss_pred -----eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 262 -----KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 262 -----~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
...+.+.|.|+.++--.. ... -.+++...++.+....+
T Consensus 229 lessavaav~vdpsgrll~sg~~--dss--c~lydirg~r~iq~f~p 271 (350)
T KOG0641|consen 229 LESSAVAAVAVDPSGRLLASGHA--DSS--CMLYDIRGGRMIQRFHP 271 (350)
T ss_pred cccceeEEEEECCCcceeeeccC--CCc--eEEEEeeCCceeeeeCC
Confidence 234478899987654332 233 33445556776665554
No 372
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=90.49 E-value=4.2 Score=41.18 Aligned_cols=130 Identities=10% Similarity=0.073 Sum_probs=65.1
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCcc
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~ 188 (571)
..+..+.|.|.++-++.++.+.. ++|.+|.+- +....... +... ..++.|.....+.-
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sG---nlyly~~~~-----~~~~t~p~-------~~~~-----k~~~~f~i~t~ksk-- 277 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASG---NLYLYDKEI-----VCGATAPS-------YQAL-----KDGDQFAILTSKSK-- 277 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecC---ceEEeeccc-----cccCCCCc-------cccc-----CCCCeeEEeeeecc--
Confidence 45677899998876666666664 377777621 11111111 2221 13444443221110
Q ss_pred EEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--CCceEEEE
Q 008274 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--GKGKHVAV 266 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~ 266 (571)
... ....+...+.-.+.++. +|+||++|...+.+. ...|+-.+. . ....+-. -.|...+.
T Consensus 278 ----~~r--NPv~~w~~~~g~in~f~-FS~DG~~LA~VSqDG---fLRvF~fdt----~----eLlg~mkSYFGGLLCvc 339 (636)
T KOG2394|consen 278 ----KTR--NPVARWHIGEGSINEFA-FSPDGKYLATVSQDG---FLRIFDFDT----Q----ELLGVMKSYFGGLLCVC 339 (636)
T ss_pred ----ccC--CccceeEecccccccee-EcCCCceEEEEecCc---eEEEeeccH----H----HHHHHHHhhccceEEEE
Confidence 000 00111222222344554 899999999887644 255555442 0 1111111 13445669
Q ss_pred ECCCCCEEEEEe
Q 008274 267 LDHNMRNFVDFH 278 (571)
Q Consensus 267 ~s~~g~~~v~~~ 278 (571)
|||||||+|.-.
T Consensus 340 WSPDGKyIvtGG 351 (636)
T KOG2394|consen 340 WSPDGKYIVTGG 351 (636)
T ss_pred EcCCccEEEecC
Confidence 999999987643
No 373
>PF03283 PAE: Pectinacetylesterase
Probab=90.22 E-value=0.3 Score=48.35 Aligned_cols=102 Identities=21% Similarity=0.261 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh----cCCC--eeEEEEEcCcc-CCcccc------cchhhhh-
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA----RFPD--VFQCAVSGAPV-TSWDGY------DTFYTEK- 480 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~----~~~~--~~~~~v~~~~~-~~~~~~------~~~~~~~- 480 (571)
.-+.+++++|..++.-++++|.|.|.|+||+.++.-+- ..|. .+ .+++.+++ .+...+ ...+...
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v-~~~~DsG~f~d~~~~~~~~~~~~~~~~~~ 216 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKV-KCLSDSGFFLDNPDYSGNPCIRSFYSDVV 216 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceE-EEeccccccccccCcccchhHHHHHHHHH
Confidence 34678899998886668899999999999999986543 2442 23 23344443 332111 1111110
Q ss_pred -----hcCCCCCChhhhc--cCCcchhhccCCCcEEEEecCCCC
Q 008274 481 -----YMGLPSEDPVGYE--YSSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 481 -----~~g~~~~~~~~~~--~~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
..+.|..-...+. =.-|...+..|++|++|++...|.
T Consensus 217 ~~~~~~~~~p~~C~~~~~~~C~f~q~~~~~I~tPlFivns~YD~ 260 (361)
T PF03283_consen 217 GLQNWSKSLPESCVAQYDPECFFPQYLYPYIKTPLFIVNSLYDS 260 (361)
T ss_pred HHHHhhccCCHhHHhccCccccchHHHHhhcCcceeeehhhhCH
Confidence 0022221111111 122334567889999999999983
No 374
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=90.04 E-value=7.3 Score=37.59 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=58.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC-eee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS-WVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~-w~~ 159 (571)
++++||+.+=+.... + ......+..++++|||+.|+..+.++. -|-++.+.+|+. +++-..+. ...
T Consensus 154 dV~l~d~~nl~~v~~-I-------~aH~~~lAalafs~~G~llATASeKGT---VIRVf~v~~G~k--l~eFRRG~~~~~ 220 (391)
T KOG2110|consen 154 DVVLFDTINLQPVNT-I-------NAHKGPLAALAFSPDGTLLATASEKGT---VIRVFSVPEGQK--LYEFRRGTYPVS 220 (391)
T ss_pred eEEEEEcccceeeeE-E-------EecCCceeEEEECCCCCEEEEeccCce---EEEEEEcCCccE--eeeeeCCceeeE
Confidence 678899887443322 1 235678889999999999999877652 356667777753 33322111 010
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDI 195 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~ 195 (571)
+++ +++++|+ |+..+...+--||+.++.
T Consensus 221 ---IyS-----L~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 221 ---IYS-----LSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred ---EEE-----EEECCCCCeEEEecCCCeEEEEEecc
Confidence 011 1234454 777777788889999863
No 375
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=89.88 E-value=1.5 Score=45.31 Aligned_cols=63 Identities=10% Similarity=0.080 Sum_probs=43.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~ 150 (571)
.+|.++++++.+.+.+.-.. ......+++.+.-||||.+|+....+.+ |+.+|+++++.+.+.
T Consensus 451 ~~le~~el~~ps~kel~~~~----~~~~~~~I~~l~~SsdG~yiaa~~t~g~----I~v~nl~~~~~~~l~ 513 (691)
T KOG2048|consen 451 FSLEEFELETPSFKELKSIQ----SQAKCPSISRLVVSSDGNYIAAISTRGQ----IFVYNLETLESHLLK 513 (691)
T ss_pred ceeEEEEecCcchhhhhccc----cccCCCcceeEEEcCCCCEEEEEeccce----EEEEEcccceeecch
Confidence 45566666654443331110 0234568889999999999998886664 999999999877664
No 376
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=89.81 E-value=0.29 Score=48.89 Aligned_cols=74 Identities=15% Similarity=-0.025 Sum_probs=44.7
Q ss_pred chhhhHHHHhCCcE------EEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHH
Q 008274 372 VDMRAQYLRSKGIL------VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGY 445 (571)
Q Consensus 372 ~~~~~~~l~~~G~~------v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 445 (571)
|..+.+.|+.-||. -+.+|.|-+-...+ .... -+..+...++...+.. ..++|.|++|||||.
T Consensus 126 w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e-----~rd~----yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l 194 (473)
T KOG2369|consen 126 WHELIENLVGIGYERGKTLFGAPYDWRLSYHNSE-----ERDQ----YLSKLKKKIETMYKLN--GGKKVVLISHSMGGL 194 (473)
T ss_pred HHHHHHHHHhhCcccCceeeccccchhhccCChh-----HHHH----HHHHHHHHHHHHHHHc--CCCceEEEecCCccH
Confidence 45567788888887 34456663211100 0000 1333444454444432 348999999999999
Q ss_pred HHHHHHhcCCC
Q 008274 446 LSAITLARFPD 456 (571)
Q Consensus 446 ~a~~~~~~~~~ 456 (571)
+...++..+++
T Consensus 195 ~~lyFl~w~~~ 205 (473)
T KOG2369|consen 195 YVLYFLKWVEA 205 (473)
T ss_pred HHHHHHhcccc
Confidence 99999887766
No 377
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=89.78 E-value=0.3 Score=50.50 Aligned_cols=73 Identities=10% Similarity=0.005 Sum_probs=42.0
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh-ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHH
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK-HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITL 451 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~ 451 (571)
..+.+.|++.||. -.+.+|.. -+|+.+.. .+..+.-+..+...|+.+.+.. ...++.|+||||||.+++.++
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAP---YDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAA---YDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecc---cccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHH
Confidence 5578899999997 34554332 12221110 0000011233445555444432 257999999999999999887
Q ss_pred h
Q 008274 452 A 452 (571)
Q Consensus 452 ~ 452 (571)
.
T Consensus 232 ~ 232 (642)
T PLN02517 232 K 232 (642)
T ss_pred H
Confidence 6
No 378
>PLN02324 triacylglycerol lipase
Probab=89.77 E-value=0.48 Score=47.11 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+.+.++.++++..-..-+|.+.|||+||.+|+.+|.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3556666666653111247999999999999998875
No 379
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=89.64 E-value=1.2 Score=45.17 Aligned_cols=115 Identities=14% Similarity=0.092 Sum_probs=62.0
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc------------cccchhhhHHHHhCCcEEEEECCC-CCCCCh
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW------------INTVDMRAQYLRSKGILVWKLDNR-GTARRG 398 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~------------~~~~~~~~~~l~~~G~~v~~~d~r-G~~~~~ 398 (571)
..+|.+.++. ++.+.|+++++-|||+.+.+...+ .+.+...-..|.++ -.+|.+|.| |.|.+-
T Consensus 87 ~ffy~fe~~n---dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~ 162 (498)
T COG2939 87 FFFYTFESPN---DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSR 162 (498)
T ss_pred EEEEEecCCC---CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCccc
Confidence 5566666533 236789999999999987644333 11110001122222 246777844 555443
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHc-CC--CcCCcEEEEeechHHHHHHHHHh
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GL--AKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~--~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
. -..+...+. ...-+|+..+.+.+.+. +. -...+..|+|.||||+-+..+|.
T Consensus 163 a-~~~e~~~d~-~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 163 A-LGDEKKKDF-EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred c-cccccccch-hccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 1 111111111 11245666666655443 11 13358999999999998876664
No 380
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=89.56 E-value=17 Score=33.46 Aligned_cols=66 Identities=17% Similarity=0.103 Sum_probs=43.1
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe--EEEEEEeccCccEEEEEEECCCCceEEEEEe
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI--LTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 152 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~ 152 (571)
..|.+|||.+.+.+.+... ..........|--.|+ -|+..++|.++...+|.+|.+.+..+.|+..
T Consensus 77 ~Gl~VYDLsGkqLqs~~~G-------k~NNVDLrygF~LgG~~idiaaASdR~~~~i~~y~Idp~~~~L~sitD~ 144 (364)
T COG4247 77 AGLRVYDLSGKQLQSVNPG-------KYNNVDLRYGFQLGGQSIDIAAASDRQNDKIVFYKIDPNPQYLESITDS 144 (364)
T ss_pred CCeEEEecCCCeeeecCCC-------cccccccccCcccCCeEEEEEecccccCCeEEEEEeCCCccceeeccCC
Confidence 3578999999877665331 1111122223445565 4667788888888999999999776666553
No 381
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=89.52 E-value=22 Score=34.67 Aligned_cols=115 Identities=11% Similarity=0.048 Sum_probs=61.5
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-------cCCeeeccCCcccCCCCC-cc--CCCeEEEE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-------LDSWVNLHDCFTPLDKGV-TK--YSGGFIWA 181 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-------~~~w~~~~~~~~~~~~~~-~~--~~d~~~~~ 181 (571)
..+.++.++..++|.+-.+ .||..|+.+.+++..-.-+ ..+|-+. .+.+ .. ..+.++++
T Consensus 187 ~~~~~~~~~~~~~F~Sy~G----~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPG-------G~Q~~A~~~~~~rlyvL 255 (342)
T PF06433_consen 187 EHPAYSRDGGRLYFVSYEG----NVYSADLSGDSAKFGKPWSLLTDAEKADGWRPG-------GWQLIAYHAASGRLYVL 255 (342)
T ss_dssp S--EEETTTTEEEEEBTTS----EEEEEEETTSSEEEEEEEESS-HHHHHTTEEE--------SSS-EEEETTTTEEEEE
T ss_pred cccceECCCCeEEEEecCC----EEEEEeccCCcccccCcccccCccccccCcCCc-------ceeeeeeccccCeEEEE
Confidence 3445555444445544333 4899999888766543211 2355543 3321 11 23446666
Q ss_pred Eec-------CCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 182 SEK-------TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 182 s~~-------~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
..+ ++-.+||.+|+.+++. .++.-+. .+.++ .++.|.+=++|..+... ..|+.++.
T Consensus 256 Mh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~-~~~Si-~Vsqd~~P~L~~~~~~~---~~l~v~D~ 319 (342)
T PF06433_consen 256 MHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEH-PIDSI-AVSQDDKPLLYALSAGD---GTLDVYDA 319 (342)
T ss_dssp EEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEE-EESEE-EEESSSS-EEEEEETTT---TEEEEEET
T ss_pred ecCCCCCCccCCceEEEEEECCCCeEEEEEeCCC-ccceE-EEccCCCcEEEEEcCCC---CeEEEEeC
Confidence 544 2348999999988763 3443222 33344 48888886666655433 45777776
No 382
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=89.49 E-value=18 Score=33.62 Aligned_cols=147 Identities=13% Similarity=0.191 Sum_probs=71.5
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g 186 (571)
...+-.++|||.|++++..+-... ..+.--..++-..+...++.. .+. . ..+|+.++ ++.+..|+-
T Consensus 61 krsVRsvAwsp~g~~La~aSFD~t----~~Iw~k~~~efecv~~lEGHE-nEV-K-------~Vaws~sG~~LATCSRDK 127 (312)
T KOG0645|consen 61 KRSVRSVAWSPHGRYLASASFDAT----VVIWKKEDGEFECVATLEGHE-NEV-K-------CVAWSASGNYLATCSRDK 127 (312)
T ss_pred hheeeeeeecCCCcEEEEeeccce----EEEeecCCCceeEEeeeeccc-cce-e-------EEEEcCCCCEEEEeeCCC
Confidence 356777999999997776654331 222222344444433322110 000 0 01344555 666655544
Q ss_pred ccEEEEEeCCCce---eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-e
Q 008274 187 FRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-K 262 (571)
Q Consensus 187 ~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g-~ 262 (571)
---||.++ ++.+ ...|+...-+|.... |.|.-. |.|+..-++. ..+|+-....+.. -...|..-.+ .
T Consensus 128 SVWiWe~d-eddEfec~aVL~~HtqDVK~V~-WHPt~d-lL~S~SYDnT--Ik~~~~~~dddW~----c~~tl~g~~~TV 198 (312)
T KOG0645|consen 128 SVWIWEID-EDDEFECIAVLQEHTQDVKHVI-WHPTED-LLFSCSYDNT--IKVYRDEDDDDWE----CVQTLDGHENTV 198 (312)
T ss_pred eEEEEEec-CCCcEEEEeeeccccccccEEE-EcCCcc-eeEEeccCCe--EEEEeecCCCCee----EEEEecCccceE
Confidence 33344454 2222 344555555677665 888655 5555554442 7777765311111 1112222111 2
Q ss_pred EEEEECCCCCEEEE
Q 008274 263 HVAVLDHNMRNFVD 276 (571)
Q Consensus 263 ~~~~~s~~g~~~v~ 276 (571)
-...|.+.|..++-
T Consensus 199 W~~~F~~~G~rl~s 212 (312)
T KOG0645|consen 199 WSLAFDNIGSRLVS 212 (312)
T ss_pred EEEEecCCCceEEE
Confidence 33477888866543
No 383
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=89.36 E-value=13 Score=37.85 Aligned_cols=23 Identities=13% Similarity=0.157 Sum_probs=18.5
Q ss_pred CCCceeEEEEEccCCeEEEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLN 128 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~ 128 (571)
.....+..++|.|++..++|+..
T Consensus 143 Q~~~~v~c~~W~p~S~~vl~c~g 165 (737)
T KOG1524|consen 143 QNEESIRCARWAPNSNSIVFCQG 165 (737)
T ss_pred hcCceeEEEEECCCCCceEEecC
Confidence 45667888999999998888853
No 384
>PLN00413 triacylglycerol lipase
Probab=89.34 E-value=0.53 Score=47.45 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+...++.+.++. ...++.+.|||+||.+|..+++
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3555566555543 3468999999999999998874
No 385
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=89.24 E-value=0.93 Score=39.73 Aligned_cols=50 Identities=18% Similarity=0.157 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEE-EcCc
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV-SGAP 466 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v-~~~~ 466 (571)
++..+++-|.... ....++.++|||||..++..++...+..+..++ ..+|
T Consensus 93 ~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 93 RLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 3444444443332 356799999999999999988876444444433 3444
No 386
>PLN02802 triacylglycerol lipase
Probab=88.94 E-value=0.58 Score=47.60 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+++.+.++.+.++..-..-+|.|.|||+||.+|+.++..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 456666777666532122479999999999999988754
No 387
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=88.85 E-value=20 Score=33.29 Aligned_cols=131 Identities=11% Similarity=0.009 Sum_probs=69.4
Q ss_pred EEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCCCCCCCeEecCCC-ceEEEE
Q 008274 190 LYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAV 266 (571)
Q Consensus 190 l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~ 266 (571)
+-+.|.++|+....-.-.-.+... .|+.+|+++.++++.. ......++.+.-.+..........+++..+ -..++.
T Consensus 76 ~kLWDv~tGk~la~~k~~~~Vk~~-~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~ 154 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWKTNSPVKRV-DFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSAL 154 (327)
T ss_pred eEEEEcCCCcEEEEeecCCeeEEE-eeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeee
Confidence 344555555433332223345555 4899999999998853 233455555442110000001133444333 334558
Q ss_pred ECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcC
Q 008274 267 LDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQAN 327 (571)
Q Consensus 267 ~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (571)
|+|-+++++.-.++. .|..++..+|.+...-.. .-...+....+..-..+.++..
T Consensus 155 Wg~l~~~ii~Ghe~G----~is~~da~~g~~~v~s~~--~h~~~Ind~q~s~d~T~FiT~s 209 (327)
T KOG0643|consen 155 WGPLGETIIAGHEDG----SISIYDARTGKELVDSDE--EHSSKINDLQFSRDRTYFITGS 209 (327)
T ss_pred ecccCCEEEEecCCC----cEEEEEcccCceeeechh--hhccccccccccCCcceEEecc
Confidence 999999888766553 688888888765433211 1223455555555555555543
No 388
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=88.81 E-value=3.6 Score=43.76 Aligned_cols=126 Identities=8% Similarity=-0.076 Sum_probs=62.8
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE---EEEEeecCCee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK---VILVEELDSWV 158 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~---~l~~~~~~~w~ 158 (571)
+.+|++...++... ++-...++.++++|||+..+.=+-.+ ....+++.+-+.. .|.......-.
T Consensus 434 vRiWsI~d~~Vv~W---------~Dl~~lITAvcy~PdGk~avIGt~~G----~C~fY~t~~lk~~~~~~I~~~~~Kk~~ 500 (712)
T KOG0283|consen 434 VRLWSISDKKVVDW---------NDLRDLITAVCYSPDGKGAVIGTFNG----YCRFYDTEGLKLVSDFHIRLHNKKKKQ 500 (712)
T ss_pred eEEeecCcCeeEee---------hhhhhhheeEEeccCCceEEEEEecc----EEEEEEccCCeEEEeeeEeeccCcccc
Confidence 55566665544322 34567899999999999554432222 2455555544322 11111100000
Q ss_pred e-ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEE--EEEEEEeecCcEEEEEE
Q 008274 159 N-LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMV--EQIVGVNEASGQVYFTG 227 (571)
Q Consensus 159 ~-~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~--~~~~~~s~dg~~l~~~~ 227 (571)
. .-..|++.+. .++.++++|++. +|.++|.........=+|.-.. ....+++.||++|+..+
T Consensus 501 ~~rITG~Q~~p~----~~~~vLVTSnDS---rIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s 565 (712)
T KOG0283|consen 501 GKRITGLQFFPG----DPDEVLVTSNDS---RIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS 565 (712)
T ss_pred CceeeeeEecCC----CCCeEEEecCCC---ceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee
Confidence 0 0012334321 355788877654 4667765333322222221111 12335888999999998
No 389
>PLN02162 triacylglycerol lipase
Probab=88.42 E-value=0.64 Score=46.76 Aligned_cols=35 Identities=26% Similarity=0.097 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+.+.++.+.++. ...++.+.|||+||.+|..+++
T Consensus 263 ~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 3445555444432 3468999999999999988754
No 390
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=88.34 E-value=23 Score=37.54 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=60.7
Q ss_pred eeEEEEEccC---Ce-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC
Q 008274 110 YLARVNWMHG---NI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspD---g~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~ 185 (571)
.+..+...++ ++ .++++.... ..+...|.+++++......++..-++. ..+ ..+...++.++
T Consensus 235 ~~E~vv~l~~~~~~~~~~~~TaG~~---g~~~~~d~es~~~~~~~~~~~~~e~~~---~~~-----~~~~~~~l~vt--- 300 (775)
T KOG0319|consen 235 SLESVVRLREELGGKGEYIITAGGS---GVVQYWDSESGKCVYKQRQSDSEEIDH---LLA-----IESMSQLLLVT--- 300 (775)
T ss_pred heeeEEEechhcCCcceEEEEecCC---ceEEEEecccchhhhhhccCCchhhhc---cee-----ccccCceEEEE---
Confidence 4445556555 33 233333322 247788999988754433321100100 011 11222333333
Q ss_pred CccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 186 GFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 186 g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.-++|++++.+..++ ++|-...-++-+.-.|.|+.+.|++.+|-.. ..+|
T Consensus 301 aeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~---lr~y 351 (775)
T KOG0319|consen 301 AEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPE---LRLY 351 (775)
T ss_pred ccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCc---eEEE
Confidence 235788888776654 5666555566666668888899999887654 5666
No 391
>PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=88.29 E-value=11 Score=35.62 Aligned_cols=106 Identities=11% Similarity=0.020 Sum_probs=69.8
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
++++.+|.+.++++.+=-+ +--....+.+-++.+-..|=...+.+.......+.-||.+|..+|+.+.|.+.+..
T Consensus 78 SHVH~yd~e~~~VrLLWke-sih~~~~WaGEVSdIlYdP~~D~LLlAR~DGh~nLGvy~ldr~~g~~~~L~~~ps~---- 152 (339)
T PF09910_consen 78 SHVHEYDTENDSVRLLWKE-SIHDKTKWAGEVSDILYDPYEDRLLLARADGHANLGVYSLDRRTGKAEKLSSNPSL---- 152 (339)
T ss_pred ceEEEEEcCCCeEEEEEec-ccCCccccccchhheeeCCCcCEEEEEecCCcceeeeEEEcccCCceeeccCCCCc----
Confidence 7899999999988765111 00011345566788889997778888877777777899999999999998764322
Q ss_pred ccCCcccCCCCCccCCCeEEEEEec--CCccEEEEEeCCCcee
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEK--TGFRHLYLHDINGTCL 200 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~--~g~~~l~~~~~~~~~~ 200 (571)
++ ..-.|..+|..+. .|.+.|..+|+.+++.
T Consensus 153 ---------KG-~~~~D~a~F~i~~~~~g~~~i~~~Dli~~~~ 185 (339)
T PF09910_consen 153 ---------KG-TLVHDYACFGINNFHKGVSGIHCLDLISGKW 185 (339)
T ss_pred ---------Cc-eEeeeeEEEeccccccCCceEEEEEccCCeE
Confidence 00 0112233333322 4567788888776655
No 392
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.25 E-value=22 Score=33.40 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=80.4
Q ss_pred EEEEecCCccEEEEEeCCCce-eeceeec-CeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCCCCCCCe
Q 008274 179 IWASEKTGFRHLYLHDINGTC-LGPITEG-DWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~~-~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
++...+.|. .-+++|.++.+ +..+++. ....-.--.+|+||.+||.+-+.- +.....+|...- .-. ..-+
T Consensus 83 vafARrPGt-f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~--~fq---rvgE 156 (366)
T COG3490 83 VAFARRPGT-FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE--GFQ---RVGE 156 (366)
T ss_pred EEEEecCCc-eEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc--ccc---eecc
Confidence 333455442 24556665543 2333322 222211113899999999998853 333466666542 110 0111
Q ss_pred EecCCCceEEEEECCCCCEEEEEeeCC-CC-------------CCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCe
Q 008274 255 KLTNGKGKHVAVLDHNMRNFVDFHDSL-DS-------------PPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPD 320 (571)
Q Consensus 255 ~lt~~~g~~~~~~s~~g~~~v~~~s~~-~~-------------p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 320 (571)
--|.+-|-+.+++.+||+.+|..-..- +. -|.+.+++..+|..+.+.+ +.+ .......+
T Consensus 157 ~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~----Lp~---~l~~lSiR 229 (366)
T COG3490 157 FSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHT----LPA---SLRQLSIR 229 (366)
T ss_pred cccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhcc----Cch---hhhhccee
Confidence 224455778899999999887643311 11 1455555544555332221 111 12233444
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEc
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVY 356 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~h 356 (571)
.+.+. .||..+.+.-|.-+. ..+|.+|-.|
T Consensus 230 Hld~g-~dgtvwfgcQy~G~~-----~d~ppLvg~~ 259 (366)
T COG3490 230 HLDIG-RDGTVWFGCQYRGPR-----NDLPPLVGHF 259 (366)
T ss_pred eeeeC-CCCcEEEEEEeeCCC-----ccCCcceeec
Confidence 44444 478777777665433 2456555444
No 393
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=88.20 E-value=29 Score=34.47 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=41.7
Q ss_pred EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEE
Q 008274 210 VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRIL 288 (571)
Q Consensus 210 ~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~ 288 (571)
..... +.||| .|+-++..++ ...+| ++.+.. ...+.+...+ .-..+||.+|-|++..+... .+.
T Consensus 350 ~ts~~-fHpDg-Lifgtgt~d~--~vkiw--dlks~~-----~~a~Fpght~~vk~i~FsENGY~Lat~add~----~V~ 414 (506)
T KOG0289|consen 350 YTSAA-FHPDG-LIFGTGTPDG--VVKIW--DLKSQT-----NVAKFPGHTGPVKAISFSENGYWLATAADDG----SVK 414 (506)
T ss_pred eEEee-EcCCc-eEEeccCCCc--eEEEE--EcCCcc-----ccccCCCCCCceeEEEeccCceEEEEEecCC----eEE
Confidence 44443 89998 3555555554 35554 452221 2223332222 23458999998887766442 377
Q ss_pred EEEcCCCceeEec
Q 008274 289 LCSLQDGSLVLPL 301 (571)
Q Consensus 289 ~~~~~~~~~~~~l 301 (571)
+.|++.-+..+.+
T Consensus 415 lwDLRKl~n~kt~ 427 (506)
T KOG0289|consen 415 LWDLRKLKNFKTI 427 (506)
T ss_pred EEEehhhccccee
Confidence 7787554443333
No 394
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=88.14 E-value=2 Score=38.76 Aligned_cols=80 Identities=24% Similarity=0.057 Sum_probs=45.4
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHH-HHHHHHHcCCCcCCcEEEEeechHHHHHHHHH
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT-GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITL 451 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~ 451 (571)
..+...+. ..+.|+.++.+|.+..... ....+++.. .+..+... ....++.++|||+||.++..++
T Consensus 16 ~~~~~~l~-~~~~v~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a 82 (212)
T smart00824 16 ARLAAALR-GRRDVSALPLPGFGPGEPL----------PASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAVA 82 (212)
T ss_pred HHHHHhcC-CCccEEEecCCCCCCCCCC----------CCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHHH
Confidence 33445554 3689999999987532210 011222222 22223222 1345789999999999998777
Q ss_pred hc---CCCeeEEEEEcC
Q 008274 452 AR---FPDVFQCAVSGA 465 (571)
Q Consensus 452 ~~---~~~~~~~~v~~~ 465 (571)
.+ .+..+...+...
T Consensus 83 ~~l~~~~~~~~~l~~~~ 99 (212)
T smart00824 83 ARLEARGIPPAAVVLLD 99 (212)
T ss_pred HHHHhCCCCCcEEEEEc
Confidence 64 344455555443
No 395
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=87.84 E-value=8.7 Score=37.65 Aligned_cols=120 Identities=9% Similarity=0.109 Sum_probs=69.7
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC----Ce
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD----SW 157 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~----~w 157 (571)
|..||+.++..+.. -+..+-+..+.-++||..+... .|+. .+-++|+.+.+.+........ .|
T Consensus 324 vRfwD~Rs~~~~~s---------v~~gg~vtSl~ls~~g~~lLss-sRDd---tl~viDlRt~eI~~~~sA~g~k~asDw 390 (459)
T KOG0288|consen 324 VRFWDIRSADKTRS---------VPLGGRVTSLDLSMDGLELLSS-SRDD---TLKVIDLRTKEIRQTFSAEGFKCASDW 390 (459)
T ss_pred eEEEeccCCceeeE---------eecCcceeeEeeccCCeEEeee-cCCC---ceeeeecccccEEEEeecccccccccc
Confidence 66677666544332 1245578889999999855544 4443 278889999888776554322 12
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeec-Ce--EEEEEEEEeecCcEEEEEEc
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEG-DW--MVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~--~~~~~~~~s~dg~~l~~~~~ 228 (571)
.-. ..+||+ ++....-+| .||+.+..+++.+..-+. .- .+..+ .|++.|+.+.-...
T Consensus 391 trv-----------vfSpd~~YvaAGS~dg--sv~iW~v~tgKlE~~l~~s~s~~aI~s~-~W~~sG~~Llsadk 451 (459)
T KOG0288|consen 391 TRV-----------VFSPDGSYVAAGSADG--SVYIWSVFTGKLEKVLSLSTSNAAITSL-SWNPSGSGLLSADK 451 (459)
T ss_pred cee-----------EECCCCceeeeccCCC--cEEEEEccCceEEEEeccCCCCcceEEE-EEcCCCchhhcccC
Confidence 211 234554 444433344 467777777776544332 11 24444 49998877665443
No 396
>PLN02934 triacylglycerol lipase
Probab=87.66 E-value=0.71 Score=46.97 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+...++.+.++. ...++.+.|||+||.+|..+++
T Consensus 306 ~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 3556666666553 3468999999999999998864
No 397
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=87.50 E-value=1.4 Score=38.98 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=40.5
Q ss_pred CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc--C----CC
Q 008274 383 GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR--F----PD 456 (571)
Q Consensus 383 G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~--~----~~ 456 (571)
...+..++|+-..... .+...... ...++...++....+ ....+++|+|+|.|+.++..++.. . .+
T Consensus 39 ~~~~~~V~YpA~~~~~-~y~~S~~~-----G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~ 110 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN-SYGDSVAA-----GVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVAD 110 (179)
T ss_dssp EEEEEE--S---SCGG-SCHHHHHH-----HHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHH
T ss_pred eeEEEecCCCCCCCcc-cccccHHH-----HHHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhccCChhhhh
Confidence 3566667888543321 11111110 034455555554444 245799999999999999999876 1 23
Q ss_pred eeEEEEEcC
Q 008274 457 VFQCAVSGA 465 (571)
Q Consensus 457 ~~~~~v~~~ 465 (571)
++.+++++.
T Consensus 111 ~I~avvlfG 119 (179)
T PF01083_consen 111 RIAAVVLFG 119 (179)
T ss_dssp HEEEEEEES
T ss_pred hEEEEEEec
Confidence 566666543
No 398
>PLN02761 lipase class 3 family protein
Probab=87.27 E-value=0.85 Score=46.58 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHcCC---C-cCCcEEEEeechHHHHHHHHHh
Q 008274 415 EDQLTGAEWLIKQGL---A-KVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~---~-d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+++.+.++.+.+... - ..-+|.+.|||+||.+|+.++.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 446667777765421 1 2347999999999999998874
No 399
>PLN02753 triacylglycerol lipase
Probab=87.23 E-value=0.85 Score=46.62 Aligned_cols=38 Identities=26% Similarity=0.278 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHcCCC---cCCcEEEEeechHHHHHHHHHh
Q 008274 415 EDQLTGAEWLIKQGLA---KVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~---d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+.+.+.++.+.++... ..-+|.|.|||+||.+|+.+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4456667776664311 1358999999999999998874
No 400
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=87.17 E-value=35 Score=34.33 Aligned_cols=163 Identities=12% Similarity=0.058 Sum_probs=83.9
Q ss_pred EEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccC
Q 008274 83 GVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHD 162 (571)
Q Consensus 83 ~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~ 162 (571)
-.||++++.. +.++ .+...|+-...|+|-...+++.-.-++ . |-..|+.+-..+. .+-..+
T Consensus 136 k~~d~s~a~v-~~~l-------~~htDYVR~g~~~~~~~hivvtGsYDg-~--vrl~DtR~~~~~v-~elnhg------- 196 (487)
T KOG0310|consen 136 KYWDLSTAYV-QAEL-------SGHTDYVRCGDISPANDHIVVTGSYDG-K--VRLWDTRSLTSRV-VELNHG------- 196 (487)
T ss_pred EEEEcCCcEE-EEEe-------cCCcceeEeeccccCCCeEEEecCCCc-e--EEEEEeccCCcee-EEecCC-------
Confidence 4578888775 5555 356779999999998887777644443 2 4555555443222 221111
Q ss_pred CcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceee---cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 163 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE---GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 163 ~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.|+.......+.+++..+ |-+.+-++|+.+|. +.++. ..-.+.... +..++..|+-. ..++. ..+|.
T Consensus 197 --~pVe~vl~lpsgs~iasA---gGn~vkVWDl~~G~-qll~~~~~H~KtVTcL~-l~s~~~rLlS~-sLD~~--VKVfd 266 (487)
T KOG0310|consen 197 --CPVESVLALPSGSLIASA---GGNSVKVWDLTTGG-QLLTSMFNHNKTVTCLR-LASDSTRLLSG-SLDRH--VKVFD 266 (487)
T ss_pred --CceeeEEEcCCCCEEEEc---CCCeEEEEEecCCc-eehhhhhcccceEEEEE-eecCCceEeec-ccccc--eEEEE
Confidence 111111011122343332 55667777866332 12222 334566554 55567555443 33332 55555
Q ss_pred EEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCC
Q 008274 240 AKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSL 281 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~ 281 (571)
.+ +.+ -.-...-....-+..+|||+..+|.-.++.
T Consensus 267 ~t---~~K----vv~s~~~~~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 267 TT---NYK----VVHSWKYPGPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred cc---ceE----EEEeeecccceeeEEecCCCceEEEecccc
Confidence 21 111 111122222345678999999988877764
No 401
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=86.95 E-value=32 Score=35.70 Aligned_cols=50 Identities=18% Similarity=0.078 Sum_probs=32.6
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEE-EEEeccCccEEEEEEECCCC
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTA-QVLNRSQTKLKVLKFDIKTG 144 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~-~~~~r~~~~~~i~~~d~~~g 144 (571)
+.+|-+.||.-.+.. ..+..+..++|+|.++.-+ .++... .++++|..-|
T Consensus 424 vriWEi~TgRcvr~~---------~~d~~I~~vaw~P~~~~~vLAvA~~~----~~~ivnp~~G 474 (733)
T KOG0650|consen 424 VRIWEIATGRCVRTV---------QFDSEIRSVAWNPLSDLCVLAVAVGE----CVLIVNPIFG 474 (733)
T ss_pred EEEEEeecceEEEEE---------eecceeEEEEecCCCCceeEEEEecC----ceEEeCcccc
Confidence 567788887654432 2456788899999998433 232222 1788888877
No 402
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=86.57 E-value=10 Score=36.56 Aligned_cols=159 Identities=9% Similarity=0.116 Sum_probs=82.2
Q ss_pred EEEEEECCCC-ceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceE--EEEEeecCC
Q 008274 81 RLGVVSAAGG-PVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRK--VILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~--~l~~~~~~~ 156 (571)
++-+||..-. ..+.+++ +-..+..+.++|-.. +|+.+.... .|+++|+.++... .+.....+
T Consensus 168 ~i~IWD~~R~~Pv~smsw---------G~Dti~svkfNpvETsILas~~sDr----sIvLyD~R~~~Pl~KVi~~mRTN- 233 (433)
T KOG0268|consen 168 QIDIWDEQRDNPVSSMSW---------GADSISSVKFNPVETSILASCASDR----SIVLYDLRQASPLKKVILTMRTN- 233 (433)
T ss_pred eeeecccccCCccceeec---------CCCceeEEecCCCcchheeeeccCC----ceEEEecccCCccceeeeecccc-
Confidence 4566776643 3334433 233556688888776 455442222 2999999988743 22222222
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
+.+|+|..|.|++-.+ -.+||.+|.-.-+ +..+-.+.- .+-+. -+||-|+.++-.+-+..
T Consensus 234 -------------~IswnPeafnF~~a~E-D~nlY~~DmR~l~~p~~v~~dhvsAV~dV-dfsptG~EfvsgsyDks--- 295 (433)
T KOG0268|consen 234 -------------TICWNPEAFNFVAANE-DHNLYTYDMRNLSRPLNVHKDHVSAVMDV-DFSPTGQEFVSGSYDKS--- 295 (433)
T ss_pred -------------ceecCccccceeeccc-cccceehhhhhhcccchhhcccceeEEEe-ccCCCcchhccccccce---
Confidence 1256676677765443 3468888843211 111222211 23333 48888877665554433
Q ss_pred eEEEEEEeCCCCCCCCCCCeEecCC---CceEEEEECCCCCEEEEEeeC
Q 008274 235 SHLYCAKLYPDWNHTLEAPVKLTNG---KGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~~~~~~lt~~---~g~~~~~~s~~g~~~v~~~s~ 280 (571)
-.||.++- + .-+.+... .....+.+|.|.+++ ++.|.
T Consensus 296 IRIf~~~~---~-----~SRdiYhtkRMq~V~~Vk~S~Dskyi-~SGSd 335 (433)
T KOG0268|consen 296 IRIFPVNH---G-----HSRDIYHTKRMQHVFCVKYSMDSKYI-ISGSD 335 (433)
T ss_pred EEEeecCC---C-----cchhhhhHhhhheeeEEEEeccccEE-EecCC
Confidence 55665542 2 11222211 234556889998754 44443
No 403
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=86.56 E-value=8.6 Score=37.71 Aligned_cols=63 Identities=16% Similarity=0.053 Sum_probs=37.9
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEe
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 152 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~ 152 (571)
|-++|+.+.+.+..-...+ .....-...+.|||||++++.-+... .||+.++.+|++..+.+.
T Consensus 365 l~viDlRt~eI~~~~sA~g----~k~asDwtrvvfSpd~~YvaAGS~dg----sv~iW~v~tgKlE~~l~~ 427 (459)
T KOG0288|consen 365 LKVIDLRTKEIRQTFSAEG----FKCASDWTRVVFSPDGSYVAAGSADG----SVYIWSVFTGKLEKVLSL 427 (459)
T ss_pred eeeeecccccEEEEeeccc----cccccccceeEECCCCceeeeccCCC----cEEEEEccCceEEEEecc
Confidence 4567777766553311100 11122356789999999766543322 399999999998665443
No 404
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=86.27 E-value=14 Score=36.54 Aligned_cols=138 Identities=10% Similarity=-0.021 Sum_probs=76.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~ 159 (571)
.|.++|+.+++.+..... .....-+..++|+|-+..|+....-++ .|.+.|+..-.....+-+. ++.-
T Consensus 251 ~L~iwD~R~~~~~~~~~~------~ah~~~vn~~~fnp~~~~ilAT~S~D~---tV~LwDlRnL~~~lh~~e~H~dev-- 319 (422)
T KOG0264|consen 251 KLMIWDTRSNTSKPSHSV------KAHSAEVNCVAFNPFNEFILATGSADK---TVALWDLRNLNKPLHTFEGHEDEV-- 319 (422)
T ss_pred eEEEEEcCCCCCCCcccc------cccCCceeEEEeCCCCCceEEeccCCC---cEEEeechhcccCceeccCCCcce--
Confidence 689999986422111110 123556777899997774444433332 3888888765543332221 1110
Q ss_pred ccCCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCce----------eec-eeec--CeEEEEEEEEeecCcEEE
Q 008274 160 LHDCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTC----------LGP-ITEG--DWMVEQIVGVNEASGQVY 224 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~----------~~~-lT~~--~~~~~~~~~~s~dg~~l~ 224 (571)
|+- .|+|. .++..|..++.-++|-+..-+.+ ++. ++-+ ..-+.++. |+|...++.
T Consensus 320 ----~~V-----~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~Dfs-Wnp~ePW~I 389 (422)
T KOG0264|consen 320 ----FQV-----EWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFS-WNPNEPWTI 389 (422)
T ss_pred ----EEE-----EeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCccccccccc-CCCCCCeEE
Confidence 111 23333 46666666666666665533322 121 2221 22345564 999999999
Q ss_pred EEEcCCCCceeEEEEEE
Q 008274 225 FTGTLDGPLESHLYCAK 241 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~ 241 (571)
.+...++. .||+.+.
T Consensus 390 ~SvaeDN~--LqIW~~s 404 (422)
T KOG0264|consen 390 ASVAEDNI--LQIWQMA 404 (422)
T ss_pred EEecCCce--EEEeecc
Confidence 99888874 8999876
No 405
>PLN02310 triacylglycerol lipase
Probab=86.14 E-value=1 Score=44.77 Aligned_cols=38 Identities=16% Similarity=0.181 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHcCC-C-cCCcEEEEeechHHHHHHHHHhc
Q 008274 416 DQLTGAEWLIKQGL-A-KVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 416 D~~~~~~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.+.+.++.|.+... . ...+|.|.|||+||.+|+.++..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34555666554321 1 23479999999999999888753
No 406
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=85.99 E-value=10 Score=38.17 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=53.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.++|.++.....+.. + ...++.+.+||||..++.-+..+ ...||+++..+-...++-+... ..+
T Consensus 429 ~w~V~d~e~~~lv~~~~--------d-~~~ls~v~ysp~G~~lAvgs~d~--~iyiy~Vs~~g~~y~r~~k~~g-s~i-- 494 (626)
T KOG2106|consen 429 RWFVLDTETQDLVTIHT--------D-NEQLSVVRYSPDGAFLAVGSHDN--HIYIYRVSANGRKYSRVGKCSG-SPI-- 494 (626)
T ss_pred eEEEEecccceeEEEEe--------c-CCceEEEEEcCCCCEEEEecCCC--eEEEEEECCCCcEEEEeeeecC-cee--
Confidence 45677777755444432 3 67888999999999888876554 4456777766655555544322 111
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYL 192 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~ 192 (571)
..+ .|+.|+=++.++..++.=||-
T Consensus 495 ----thL----DwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 495 ----THL----DWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred ----EEe----eecCCCceEEeccCceEEEEE
Confidence 111 466776555555555544444
No 407
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=85.79 E-value=40 Score=35.51 Aligned_cols=57 Identities=12% Similarity=0.147 Sum_probs=34.4
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
|-+|++..+=-....+. .+.+..+...+|++.|++ |...-+ ..|...|+.+++.+.-
T Consensus 49 IEiwN~~~~w~~~~vi~------g~~drsIE~L~W~e~~RL--FS~g~s---g~i~EwDl~~lk~~~~ 105 (691)
T KOG2048|consen 49 IEIWNLSNNWFLEPVIH------GPEDRSIESLAWAEGGRL--FSSGLS---GSITEWDLHTLKQKYN 105 (691)
T ss_pred EEEEccCCCceeeEEEe------cCCCCceeeEEEccCCeE--EeecCC---ceEEEEecccCceeEE
Confidence 45566665433333333 235678888999977763 333322 2488889888876543
No 408
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=85.70 E-value=31 Score=32.29 Aligned_cols=151 Identities=12% Similarity=0.016 Sum_probs=73.9
Q ss_pred EEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEE
Q 008274 113 RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYL 192 (571)
Q Consensus 113 ~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~ 192 (571)
.+.-+|||. +.|..+. ...|=.+|..+|+.++.--.+.. .+.+- ...+|+-.|+.+. |. -|-+
T Consensus 66 dvapapdG~-VWft~qg---~gaiGhLdP~tGev~~ypLg~Ga-----~Phgi------v~gpdg~~Witd~-~~-aI~R 128 (353)
T COG4257 66 DVAPAPDGA-VWFTAQG---TGAIGHLDPATGEVETYPLGSGA-----SPHGI------VVGPDGSAWITDT-GL-AIGR 128 (353)
T ss_pred ccccCCCCc-eEEecCc---cccceecCCCCCceEEEecCCCC-----CCceE------EECCCCCeeEecC-cc-eeEE
Confidence 456788985 3443322 22488999999998765322211 01110 1134553444333 22 6778
Q ss_pred EeCCCceeeceee--c--CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEEC
Q 008274 193 HDINGTCLGPITE--G--DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLD 268 (571)
Q Consensus 193 ~~~~~~~~~~lT~--~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s 268 (571)
++.++.+.++.+- . +-..+..+ ++++|+ |+|+....-.....-++-.+ ++-..+.+.+-+.....
T Consensus 129 ~dpkt~evt~f~lp~~~a~~nlet~v-fD~~G~-lWFt~q~G~yGrLdPa~~~i---------~vfpaPqG~gpyGi~at 197 (353)
T COG4257 129 LDPKTLEVTRFPLPLEHADANLETAV-FDPWGN-LWFTGQIGAYGRLDPARNVI---------SVFPAPQGGGPYGICAT 197 (353)
T ss_pred ecCcccceEEeecccccCCCccccee-eCCCcc-EEEeeccccceecCcccCce---------eeeccCCCCCCcceEEC
Confidence 8877666554432 2 22334444 887774 78887643211111111111 11122233344555777
Q ss_pred CCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 269 HNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 269 ~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
|||..-+.+... ..|.++|..++
T Consensus 198 pdGsvwyaslag----naiaridp~~~ 220 (353)
T COG4257 198 PDGSVWYASLAG----NAIARIDPFAG 220 (353)
T ss_pred CCCcEEEEeccc----cceEEcccccC
Confidence 888643322211 24666665555
No 409
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=85.28 E-value=5.4 Score=37.00 Aligned_cols=101 Identities=14% Similarity=0.035 Sum_probs=53.4
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+.|+|+ +||-..... +..+..+.+++.+ -|..|.+.+.- .| -...+..... +.+..+.+.+..
T Consensus 23 ~~P~ii-~HGigd~c~-----~~~~~~~~q~l~~~~g~~v~~leig-~g-~~~s~l~pl~--------~Qv~~~ce~v~~ 86 (296)
T KOG2541|consen 23 PVPVIV-WHGIGDSCS-----SLSMANLTQLLEELPGSPVYCLEIG-DG-IKDSSLMPLW--------EQVDVACEKVKQ 86 (296)
T ss_pred cCCEEE-EeccCcccc-----cchHHHHHHHHHhCCCCeeEEEEec-CC-cchhhhccHH--------HHHHHHHHHHhc
Confidence 468876 699433321 1233445566665 57888888753 22 1122221111 122333344443
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGA 465 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~ 465 (571)
.+. -.+.+.++|.|.||.++-.++..-++ .++-.|+.+
T Consensus 87 m~~-lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~ 125 (296)
T KOG2541|consen 87 MPE-LSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLG 125 (296)
T ss_pred chh-ccCceEEEEEccccHHHHHHHHhCCCCCcceeEecc
Confidence 332 24578999999999999877754322 234445443
No 410
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=85.27 E-value=54 Score=34.63 Aligned_cols=18 Identities=6% Similarity=0.010 Sum_probs=14.3
Q ss_pred CCceEEECCCCCeEEEEE
Q 008274 24 RKTGYWWSLDSKFIAFTQ 41 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~ 41 (571)
....+.+-|||..|..+.
T Consensus 14 ci~d~afkPDGsqL~lAA 31 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA 31 (1081)
T ss_pred chheeEECCCCceEEEec
Confidence 456788999999987754
No 411
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=85.25 E-value=6.6 Score=36.89 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=32.0
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL 154 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~ 154 (571)
.+..+..++||-||..++...-..+ +-+.|+++|+..++--+..
T Consensus 71 ~~~PvL~v~WsddgskVf~g~~Dk~----~k~wDL~S~Q~~~v~~Hd~ 114 (347)
T KOG0647|consen 71 HDGPVLDVCWSDDGSKVFSGGCDKQ----AKLWDLASGQVSQVAAHDA 114 (347)
T ss_pred cCCCeEEEEEccCCceEEeeccCCc----eEEEEccCCCeeeeeeccc
Confidence 4567778999999976655544443 7778999999888765543
No 412
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=84.86 E-value=35 Score=32.12 Aligned_cols=172 Identities=13% Similarity=0.116 Sum_probs=84.0
Q ss_pred CCceeEEEEEc--cCCe-EEEEEE--eccCccEEEEEEECCCCceEEEEE--ee----cCCeeeccCCcccCCCCCccCC
Q 008274 107 DEEYLARVNWM--HGNI-LTAQVL--NRSQTKLKVLKFDIKTGQRKVILV--EE----LDSWVNLHDCFTPLDKGVTKYS 175 (571)
Q Consensus 107 ~~~~~~~~~ws--pDg~-~i~~~~--~r~~~~~~i~~~d~~~g~~~~l~~--~~----~~~w~~~~~~~~~~~~~~~~~~ 175 (571)
..+.+....|| ||.+ +++.-+ ....+..+|...|.++|+...... .+ .-.|+++.... .+
T Consensus 43 ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~---------~p 113 (364)
T KOG0290|consen 43 APWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGV---------YP 113 (364)
T ss_pred CCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCcccc---------Cc
Confidence 45566677898 6766 566543 233356688888988887654321 10 01233321111 11
Q ss_pred CeEEEEEecCCccEEEEEeCCCce---------------eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEE
Q 008274 176 GGFIWASEKTGFRHLYLHDINGTC---------------LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 240 (571)
Q Consensus 176 d~~~~~s~~~g~~~l~~~~~~~~~---------------~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 240 (571)
| ++.. .+.+-+||++..+..+ ..+||+-+|... |-++|-.++-+.- --+|-+
T Consensus 114 d-lLAT--s~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~-------dp~~igtSSiDTT---CTiWdi 180 (364)
T KOG0290|consen 114 D-LLAT--SSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEV-------DPNLIGTSSIDTT---CTIWDI 180 (364)
T ss_pred c-hhhc--ccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccC-------CcceeEeecccCe---EEEEEE
Confidence 1 1211 1234556666543222 234554444221 2244444433322 344443
Q ss_pred EeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCC
Q 008274 241 KLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPL 306 (571)
Q Consensus 241 ~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~ 306 (571)
.. +-.+. .+.+.+..+...+...|+.++..+..+++..+ .+..+|+..-+....+++...
T Consensus 181 e~--~~~~~-vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDG---SvRmFDLR~leHSTIIYE~p~ 240 (364)
T KOG0290|consen 181 ET--GVSGT-VKTQLIAHDKEVYDIAFLKGSRDVFASVGADG---SVRMFDLRSLEHSTIIYEDPS 240 (364)
T ss_pred ee--ccccc-eeeEEEecCcceeEEEeccCccceEEEecCCC---cEEEEEecccccceEEecCCC
Confidence 32 11111 14455666767777788887766655554433 455666665555555655444
No 413
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=84.47 E-value=33 Score=36.12 Aligned_cols=43 Identities=9% Similarity=0.076 Sum_probs=28.4
Q ss_pred ecCCccEEEEEeCCCceeeceeec--CeEEEEEEEEeecCcEEEEEE
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEG--DWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~--~~~~~~~~~~s~dg~~l~~~~ 227 (571)
...|.. ++..+...++.+++..+ .-++..+. |+||++.||+.-
T Consensus 476 ~~~G~~-~~~~~~~~g~~~rf~~~P~gaE~tG~~-fspDg~tlFvni 520 (524)
T PF05787_consen 476 RNDGNN-VWAYDPDTGELKRFLVGPNGAEITGPC-FSPDGRTLFVNI 520 (524)
T ss_pred ecccce-eeeccccccceeeeccCCCCcccccce-ECCCCCEEEEEE
Confidence 334444 66667777777666543 34667775 999999988753
No 414
>PLN02719 triacylglycerol lipase
Probab=84.24 E-value=1.5 Score=44.84 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHcCCC---cCCcEEEEeechHHHHHHHHHh
Q 008274 415 EDQLTGAEWLIKQGLA---KVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~---d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+++.+.++.+.++..- ..-+|.|.|||+||.+|+.+|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3456667666654211 2347999999999999998874
No 415
>PRK13614 lipoprotein LpqB; Provisional
Probab=84.05 E-value=63 Score=34.39 Aligned_cols=122 Identities=9% Similarity=-0.015 Sum_probs=59.8
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECC-CCceEEEEE-eecCCeeeccCCcccCCCCCccCCCe--EEEEEecC
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQRKVILV-EELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~-~g~~~~l~~-~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~ 185 (571)
.+..|+|.++| .++.+.+ . +...|.+.... +++...... .....|..... ..-+ ..+.|| +.++.+.+
T Consensus 384 ~Lt~PS~d~~g-~vWtv~~-g-~~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~-I~~l----rvSrDG~R~Avi~~~~ 455 (573)
T PRK13614 384 TLTRPSFSPQD-WVWTAGP-G-GNGRIVAYRPTGVAEGAQAPTVTLTADWLAGRT-VKEL----RVSREGVRALVISEQN 455 (573)
T ss_pred CccCCcccCCC-CEEEeeC-C-CCceEEEEecCCCcccccccceeecccccCCCe-eEEE----EECCCccEEEEEEEeC
Confidence 46778999998 4443332 2 22245555543 222211111 11123543211 1111 124454 77777777
Q ss_pred CccEEEEEe---CCCceeeceeecC-----eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 186 GFRHLYLHD---INGTCLGPITEGD-----WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 186 g~~~l~~~~---~~~~~~~~lT~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
|..+|++-. -.++.++.|+..- -.+.+.. |..++..++...... .+.+++.+.+
T Consensus 456 g~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~-W~~~~sl~V~~~~~~--~~~~~~~v~v 517 (573)
T PRK13614 456 GKSRVQVAGIVRNEDGTPRELTAPITLAADSDADTGA-WVGDSTVVVTKASAT--SNVVPELLSV 517 (573)
T ss_pred CccEEEEEEEEeCCCCCeEEccCceecccCCCcceeE-EcCCCEEEEEeccCC--CcceEEEEEe
Confidence 776677632 2345556666431 1334444 876666444444333 3477888887
No 416
>PLN03037 lipase class 3 family protein; Provisional
Probab=83.99 E-value=1.1 Score=45.83 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCC-C-cCCcEEEEeechHHHHHHHHHhc
Q 008274 417 QLTGAEWLIKQGL-A-KVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 417 ~~~~~~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+.+.++.+.+... . ..-+|.|.|||+||.+|+.+|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4455555554311 1 23479999999999999988753
No 417
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=83.98 E-value=12 Score=32.63 Aligned_cols=69 Identities=9% Similarity=0.107 Sum_probs=47.4
Q ss_pred ceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC---ccEEEEEEECCCCceEEEEE
Q 008274 78 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ---TKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 78 ~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~---~~~~i~~~d~~~g~~~~l~~ 151 (571)
+...||+.|+.+++...+.+...+..+.+ -.+.|--|..+++.....-+ .-..||.+++.+|+...|+.
T Consensus 86 giGkIYIkn~~~~~~~~L~i~~~~~k~sP-----K~i~WiDD~~L~vIIG~a~GTvS~GGnLy~~nl~tg~~~~ly~ 157 (200)
T PF15525_consen 86 GIGKIYIKNLNNNNWWSLQIDQNEEKYSP-----KYIEWIDDNNLAVIIGYAHGTVSKGGNLYKYNLNTGNLTELYE 157 (200)
T ss_pred cceeEEEEecCCCceEEEEecCcccccCC-----ceeEEecCCcEEEEEccccceEccCCeEEEEEccCCceeEeee
Confidence 34579999999999988866532212222 23679999886665532222 23369999999999999976
No 418
>PRK13613 lipoprotein LpqB; Provisional
Probab=83.51 E-value=69 Score=34.42 Aligned_cols=121 Identities=16% Similarity=0.101 Sum_probs=60.2
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEecCCc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKTGF 187 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~ 187 (571)
.+..|+|.++| .++.+ ++......+.++--.+|+...+.. .|+.... ..-+ ..++|+ +.++.++.|-
T Consensus 410 ~Lt~PS~d~~g-~vWtv-d~~~~~~~vl~v~~~~G~~~~V~~----~~l~g~~-I~~l----rvSrDG~RvAvv~~~~g~ 478 (599)
T PRK13613 410 RLTSPSWDGRG-DLWVV-DRDPADPRLLWLLQGDGEPVEVRT----PELDGHR-VVAV----RVARDGVRVALIVEKDGR 478 (599)
T ss_pred cccCCcCcCCC-CEEEe-cCCCCCceEEEEEcCCCcEEEeec----cccCCCE-eEEE----EECCCccEEEEEEecCCC
Confidence 46678999988 34333 343222233333333666544322 2443211 1111 224554 7777777666
Q ss_pred cEEEEEe--C-CCceeeceee------cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 188 RHLYLHD--I-NGTCLGPITE------GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 188 ~~l~~~~--~-~~~~~~~lT~------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
.+||+-- . .++. ..|+. +--.+.+.. |..++. |+..+...+ .+..++.+++ +|.
T Consensus 479 ~~v~va~V~R~~~G~-~~l~~~~~l~~~l~~v~~~~-W~~~~s-L~Vlg~~~~-~~~~v~~v~v--dG~ 541 (599)
T PRK13613 479 RSLQIGRIVRDAKAV-VSVEEFRSLAPELEDVTDMS-WAGDSQ-LVVLGREEG-GVQQARYVQV--DGS 541 (599)
T ss_pred cEEEEEEEEeCCCCc-EEeeccEEeccCCCccceeE-EcCCCE-EEEEeccCC-CCcceEEEec--CCc
Confidence 6665532 2 2232 34433 222344554 876665 555443332 3578999999 665
No 419
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=83.27 E-value=56 Score=33.21 Aligned_cols=162 Identities=9% Similarity=0.055 Sum_probs=84.8
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCcc
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~ 188 (571)
..+..+.+.-...+|+.++..+ +|.+..++++....-.....+.-.- .-.|++ +...++.+...+|.-
T Consensus 122 stvt~v~YN~~DeyiAsvs~gG----diiih~~~t~~~tt~f~~~sgqsvR-ll~ys~-------skr~lL~~asd~G~V 189 (673)
T KOG4378|consen 122 STVTYVDYNNTDEYIASVSDGG----DIIIHGTKTKQKTTTFTIDSGQSVR-LLRYSP-------SKRFLLSIASDKGAV 189 (673)
T ss_pred ceeEEEEecCCcceeEEeccCC----cEEEEecccCccccceecCCCCeEE-Eeeccc-------ccceeeEeeccCCeE
Confidence 4555566665555777665444 4888888887654322222221110 001111 122244445556766
Q ss_pred EEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEEC
Q 008274 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLD 268 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s 268 (571)
+||=+.--......+........++ +++|.+..|+.+-..+ -.|+..|..+.. -..+|+-..-...+.|+
T Consensus 190 tlwDv~g~sp~~~~~~~HsAP~~gi-cfspsne~l~vsVG~D----kki~~yD~~s~~-----s~~~l~y~~Plstvaf~ 259 (673)
T KOG4378|consen 190 TLWDVQGMSPIFHASEAHSAPCRGI-CFSPSNEALLVSVGYD----KKINIYDIRSQA-----STDRLTYSHPLSTVAFS 259 (673)
T ss_pred EEEeccCCCcccchhhhccCCcCcc-eecCCccceEEEeccc----ceEEEeeccccc-----ccceeeecCCcceeeec
Confidence 6665432222112222222223344 4888887777665444 456666652111 34566655555667999
Q ss_pred CCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 269 HNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 269 ~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
++|.+++.-. .-.+++.+|+...+
T Consensus 260 ~~G~~L~aG~----s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 260 ECGTYLCAGN----SKGELIAYDMRSTK 283 (673)
T ss_pred CCceEEEeec----CCceEEEEecccCC
Confidence 9998776543 33578888875443
No 420
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=83.18 E-value=54 Score=33.02 Aligned_cols=138 Identities=13% Similarity=0.055 Sum_probs=72.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.++|-.+++.... .. . +. .-..+..+|||+.++.... ....|..+|..+....+ -..... ...
T Consensus 141 ~vsvid~~t~~~~~~-~~------v-G~-~P~~~a~~p~g~~vyv~~~---~~~~v~vi~~~~~~v~~-~~~~~~--~~~ 205 (381)
T COG3391 141 TVSVIDAATNKVTAT-IP------V-GN-TPTGVAVDPDGNKVYVTNS---DDNTVSVIDTSGNSVVR-GSVGSL--VGV 205 (381)
T ss_pred eEEEEeCCCCeEEEE-Ee------c-CC-CcceEEECCCCCeEEEEec---CCCeEEEEeCCCcceec-cccccc--ccc
Confidence 457778777766544 21 1 11 1256889999986666542 23358888977665443 110000 000
Q ss_pred cCCcccCCCCCccCCCe-EEEEEec-CCccEEEEEeCCCceeece--eecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEK-TGFRHLYLHDINGTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~-~g~~~l~~~~~~~~~~~~l--T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.-.|. ....++++ .++..+. .....+..++...+..... +.+.. ...-...+|+|+.+|...... ..
T Consensus 206 --~~~P~--~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~----~~ 276 (381)
T COG3391 206 --GTGPA--GIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQG----GT 276 (381)
T ss_pred --CCCCc--eEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCC----Ce
Confidence 00111 11234444 4444444 2236788888777654433 33332 112224889999999987652 44
Q ss_pred EEEEEe
Q 008274 237 LYCAKL 242 (571)
Q Consensus 237 l~~~~l 242 (571)
++.++.
T Consensus 277 V~vid~ 282 (381)
T COG3391 277 VSVIDG 282 (381)
T ss_pred EEEEeC
Confidence 555554
No 421
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.81 E-value=44 Score=31.70 Aligned_cols=76 Identities=14% Similarity=0.234 Sum_probs=45.0
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
.+++.|+||.++| |+..+... +|.-++.++.-.+.+.+.
T Consensus 88 vS~LTynp~~rtL-Fav~n~p~----------------------------------~iVElt~~GdlirtiPL~------ 126 (316)
T COG3204 88 VSSLTYNPDTRTL-FAVTNKPA----------------------------------AIVELTKEGDLIRTIPLT------ 126 (316)
T ss_pred ccceeeCCCcceE-EEecCCCc----------------------------------eEEEEecCCceEEEeccc------
Confidence 5788899999988 54444222 344456666555666543
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
+-.-...+.|..+|++ +....|.+ ...++.+|.++..
T Consensus 127 --g~~DpE~Ieyig~n~f-vi~dER~~-~l~~~~vd~~t~~ 163 (316)
T COG3204 127 --GFSDPETIEYIGGNQF-VIVDERDR-ALYLFTVDADTTV 163 (316)
T ss_pred --ccCChhHeEEecCCEE-EEEehhcc-eEEEEEEcCCccE
Confidence 2333445789999864 44455553 3345556666543
No 422
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=82.44 E-value=50 Score=32.10 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=89.4
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec-
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK- 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~- 184 (571)
..++.++.+.+.|-|..|+-. .|++ .|..-+.++|-+....... ..|.-. +++ ..|+.++.|..
T Consensus 191 gh~h~vS~V~f~P~gd~ilS~-srD~---tik~We~~tg~cv~t~~~h-~ewvr~---v~v-------~~DGti~As~s~ 255 (406)
T KOG0295|consen 191 GHEHGVSSVFFLPLGDHILSC-SRDN---TIKAWECDTGYCVKTFPGH-SEWVRM---VRV-------NQDGTIIASCSN 255 (406)
T ss_pred CcccceeeEEEEecCCeeeec-cccc---ceeEEecccceeEEeccCc-hHhEEE---EEe-------cCCeeEEEecCC
Confidence 456788899999999766655 4444 3788888998875433321 126532 222 46776665543
Q ss_pred CCccEEEEEeCCCcee-eceeecCeEEEEEEEEee--------------cCcEEEEEEcCCCCceeEEEEEEeCCCCCCC
Q 008274 185 TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNE--------------ASGQVYFTGTLDGPLESHLYCAKLYPDWNHT 249 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~--------------dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~ 249 (571)
+-.-++|.+. +++. ..|+..+..++-+ .|-| ++..+.++..++.- -.++-+++ |.
T Consensus 256 dqtl~vW~~~--t~~~k~~lR~hEh~vEci-~wap~~~~~~i~~at~~~~~~~~l~s~SrDkt--Ik~wdv~t---g~-- 325 (406)
T KOG0295|consen 256 DQTLRVWVVA--TKQCKAELREHEHPVECI-AWAPESSYPSISEATGSTNGGQVLGSGSRDKT--IKIWDVST---GM-- 325 (406)
T ss_pred CceEEEEEec--cchhhhhhhccccceEEE-EecccccCcchhhccCCCCCccEEEeecccce--EEEEeccC---Ce--
Confidence 3344555553 3332 2333333333221 2322 33456666666553 45554443 21
Q ss_pred CCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 250 LEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 250 ~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.-.+....+++.....|+|.|+|++ ++.... .+.+.++.+..-.+.+.
T Consensus 326 -cL~tL~ghdnwVr~~af~p~Gkyi~-ScaDDk---tlrvwdl~~~~cmk~~~ 373 (406)
T KOG0295|consen 326 -CLFTLVGHDNWVRGVAFSPGGKYIL-SCADDK---TLRVWDLKNLQCMKTLE 373 (406)
T ss_pred -EEEEEecccceeeeeEEcCCCeEEE-EEecCC---cEEEEEeccceeeeccC
Confidence 1112223445566679999998764 444433 46677776666554443
No 423
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=82.29 E-value=77 Score=34.11 Aligned_cols=159 Identities=8% Similarity=-0.040 Sum_probs=76.2
Q ss_pred CCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
.++-+..++-+|||+..+..+.... .-++.-.++-..|..+...+-....-+.......- .+.+||+ ++.++-=
T Consensus 453 HdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~----v~~Spdgk~LaVsLL 528 (888)
T KOG0306|consen 453 HDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLC----VSVSPDGKLLAVSLL 528 (888)
T ss_pred cccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEE----EEEcCCCcEEEEEec
Confidence 4667777888999996666543332 12223333334454433211111100000000000 0224555 6666544
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
+..-++|.+|.-. -.--|-.....|... -+|||++.|+-.+.+.+ ..+|=.+. +.= .---..+++..-+
T Consensus 529 dnTVkVyflDtlK-FflsLYGHkLPV~sm-DIS~DSklivTgSADKn---VKiWGLdF--GDC----HKS~fAHdDSvm~ 597 (888)
T KOG0306|consen 529 DNTVKVYFLDTLK-FFLSLYGHKLPVLSM-DISPDSKLIVTGSADKN---VKIWGLDF--GDC----HKSFFAHDDSVMS 597 (888)
T ss_pred cCeEEEEEeccee-eeeeecccccceeEE-eccCCcCeEEeccCCCc---eEEecccc--chh----hhhhhcccCceeE
Confidence 5556777776211 011222234445544 38999987766655544 67776666 210 0112222333345
Q ss_pred EEECCCCCEEEEEeeCC
Q 008274 265 AVLDHNMRNFVDFHDSL 281 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~ 281 (571)
+.|-|+ .++.|+++..
T Consensus 598 V~F~P~-~~~FFt~gKD 613 (888)
T KOG0306|consen 598 VQFLPK-THLFFTCGKD 613 (888)
T ss_pred EEEccc-ceeEEEecCc
Confidence 678885 5777777653
No 424
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=82.25 E-value=42 Score=33.87 Aligned_cols=161 Identities=13% Similarity=0.137 Sum_probs=86.7
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-eEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~ 185 (571)
....++.+.|-.||++++.- ...+. |-++|..+.. .+.+..++.+.- ...|.+ ..+.++...+++
T Consensus 67 Fk~~v~s~~fR~DG~LlaaG--D~sG~--V~vfD~k~r~iLR~~~ah~apv~---~~~f~~-------~d~t~l~s~sDd 132 (487)
T KOG0310|consen 67 FKDVVYSVDFRSDGRLLAAG--DESGH--VKVFDMKSRVILRQLYAHQAPVH---VTKFSP-------QDNTMLVSGSDD 132 (487)
T ss_pred hccceeEEEeecCCeEEEcc--CCcCc--EEEeccccHHHHHHHhhccCcee---EEEecc-------cCCeEEEecCCC
Confidence 45567788999999966553 33333 5555655421 122222222100 012222 123344444444
Q ss_pred CccEEEEEeCCCceee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 186 GFRHLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
.-..+|- +++.... .|+...-.+... .|+|.++.+++++.-++. ..+|-... .+. ....+.++.-..+
T Consensus 133 ~v~k~~d--~s~a~v~~~l~~htDYVR~g-~~~~~~~hivvtGsYDg~--vrl~DtR~--~~~----~v~elnhg~pVe~ 201 (487)
T KOG0310|consen 133 KVVKYWD--LSTAYVQAELSGHTDYVRCG-DISPANDHIVVTGSYDGK--VRLWDTRS--LTS----RVVELNHGCPVES 201 (487)
T ss_pred ceEEEEE--cCCcEEEEEecCCcceeEee-ccccCCCeEEEecCCCce--EEEEEecc--CCc----eeEEecCCCceee
Confidence 4444444 3444431 233322223333 489999999999987774 66665443 222 5566777666677
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
+-+-|+|..++ ++++ |.+-+.|+.+|.+
T Consensus 202 vl~lpsgs~ia-sAgG----n~vkVWDl~~G~q 229 (487)
T KOG0310|consen 202 VLALPSGSLIA-SAGG----NSVKVWDLTTGGQ 229 (487)
T ss_pred EEEcCCCCEEE-EcCC----CeEEEEEecCCce
Confidence 77777776553 3332 3788888876664
No 425
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=81.01 E-value=1.7 Score=42.30 Aligned_cols=56 Identities=25% Similarity=0.349 Sum_probs=43.3
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY 106 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~ 106 (571)
++.||||+.++++.+.++ .+++||+..|+....- .+
T Consensus 128 dL~Ws~d~~~l~s~s~dn------------------------------------s~~l~Dv~~G~l~~~~--------~d 163 (434)
T KOG1009|consen 128 DLAWSPDSNFLVSGSVDN------------------------------------SVRLWDVHAGQLLAIL--------DD 163 (434)
T ss_pred hhhccCCCceeeeeeccc------------------------------------eEEEEEeccceeEeec--------cc
Confidence 467999999999877652 4588999999865441 35
Q ss_pred CCceeEEEEEccCCeEEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQV 126 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~ 126 (571)
..+|+..++|-|-+++++..
T Consensus 164 h~~yvqgvawDpl~qyv~s~ 183 (434)
T KOG1009|consen 164 HEHYVQGVAWDPLNQYVASK 183 (434)
T ss_pred cccccceeecchhhhhhhhh
Confidence 67899999999999876644
No 426
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=80.52 E-value=28 Score=37.36 Aligned_cols=93 Identities=17% Similarity=0.253 Sum_probs=54.4
Q ss_pred ccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCC
Q 008274 172 TKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251 (571)
Q Consensus 172 ~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~ 251 (571)
+|+.+.|++.|.-+-.-.||.... ...+.-+...+| |+.+ .|.|-.+..++++..++. ..||.+. +-
T Consensus 376 SWSKn~fLLSSSMDKTVRLWh~~~-~~CL~~F~Hndf-VTcV-aFnPvDDryFiSGSLD~K--vRiWsI~---d~----- 442 (712)
T KOG0283|consen 376 SWSKNNFLLSSSMDKTVRLWHPGR-KECLKVFSHNDF-VTCV-AFNPVDDRYFISGSLDGK--VRLWSIS---DK----- 442 (712)
T ss_pred ccccCCeeEeccccccEEeecCCC-cceeeEEecCCe-eEEE-EecccCCCcEeecccccc--eEEeecC---cC-----
Confidence 566666776665555556666542 223445555565 3444 489988888888888875 6777653 11
Q ss_pred CCeEecCCCc-eEEEEECCCCCEEEEE
Q 008274 252 APVKLTNGKG-KHVAVLDHNMRNFVDF 277 (571)
Q Consensus 252 ~~~~lt~~~g-~~~~~~s~~g~~~v~~ 277 (571)
++.--++-.. ...+.++|||++.+.-
T Consensus 443 ~Vv~W~Dl~~lITAvcy~PdGk~avIG 469 (712)
T KOG0283|consen 443 KVVDWNDLRDLITAVCYSPDGKGAVIG 469 (712)
T ss_pred eeEeehhhhhhheeEEeccCCceEEEE
Confidence 2222222222 2345788999877653
No 427
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=80.25 E-value=9.2 Score=42.46 Aligned_cols=98 Identities=19% Similarity=0.255 Sum_probs=61.9
Q ss_pred CccEEEEEeCCCceeeceeecC----eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 186 GFRHLYLHDINGTCLGPITEGD----WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
+-.+|++.|+... .++.|.+. -++. +++|...-.+|+.++...+. .-|| |+ ..++ .+..++...+
T Consensus 137 ~~geI~iWDlnn~-~tP~~~~~~~~~~eI~-~lsWNrkvqhILAS~s~sg~--~~iW--Dl--r~~~---pii~ls~~~~ 205 (1049)
T KOG0307|consen 137 DDGEILIWDLNKP-ETPFTPGSQAPPSEIK-CLSWNRKVSHILASGSPSGR--AVIW--DL--RKKK---PIIKLSDTPG 205 (1049)
T ss_pred CCCcEEEeccCCc-CCCCCCCCCCCcccce-EeccchhhhHHhhccCCCCC--ceec--cc--cCCC---cccccccCCC
Confidence 3457888887652 34444431 1233 34587777788888776653 3333 44 2221 3444554433
Q ss_pred ---eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 262 ---KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 262 ---~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
.+...|.|+...-+.+.+...+.|.|.+.|++.
T Consensus 206 ~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ 241 (1049)
T KOG0307|consen 206 RMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRF 241 (1049)
T ss_pred ccceeeeeeCCCCceeeeeecCCCCCceeEeecccc
Confidence 566789999988889999999999999888643
No 428
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=80.24 E-value=2.4 Score=41.73 Aligned_cols=37 Identities=22% Similarity=0.133 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
..+.+.++.|+... ..-+|.+.|||+||.+|..++..
T Consensus 155 ~~~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY--PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHH
Confidence 44666677776653 25689999999999999988754
No 429
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=80.20 E-value=48 Score=30.40 Aligned_cols=141 Identities=16% Similarity=0.068 Sum_probs=66.9
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe-e
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW-V 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w-~ 158 (571)
.|+.+|+++|+..+- ..... +............+++.+++.... ..|+.+|+++|+..--........ .
T Consensus 87 ~l~~~d~~tG~~~W~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----g~l~~~d~~tG~~~w~~~~~~~~~~~ 157 (238)
T PF13360_consen 87 SLYALDAKTGKVLWSIYLTSS-----PPAGVRSSSSPAVDGDRLYVGTSS----GKLVALDPKTGKLLWKYPVGEPRGSS 157 (238)
T ss_dssp EEEEEETTTSCEEEEEEE-SS-----CTCSTB--SEEEEETTEEEEEETC----SEEEEEETTTTEEEEEEESSTT-SS-
T ss_pred eeEecccCCcceeeeeccccc-----cccccccccCceEecCEEEEEecc----CcEEEEecCCCcEEEEeecCCCCCCc
Confidence 789999999988765 33210 011111222233335555554432 249999999997643222211110 0
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
... .+......+....+ .++.+..+|. +..++..+++..- ....-.... ....+++.||+.+ .+ .+|+
T Consensus 158 ~~~-~~~~~~~~~~~~~~-~v~~~~~~g~--~~~~d~~tg~~~w-~~~~~~~~~--~~~~~~~~l~~~~-~~----~~l~ 225 (238)
T PF13360_consen 158 PIS-SFSDINGSPVISDG-RVYVSSGDGR--VVAVDLATGEKLW-SKPISGIYS--LPSVDGGTLYVTS-SD----GRLY 225 (238)
T ss_dssp -EE-EETTEEEEEECCTT-EEEEECCTSS--EEEEETTTTEEEE-EECSS-ECE--CEECCCTEEEEEE-TT----TEEE
T ss_pred cee-eecccccceEEECC-EEEEEcCCCe--EEEEECCCCCEEE-EecCCCccC--CceeeCCEEEEEe-CC----CEEE
Confidence 000 00000000011223 5555555553 5666888776332 211111111 1456788888887 32 5788
Q ss_pred EEEe
Q 008274 239 CAKL 242 (571)
Q Consensus 239 ~~~l 242 (571)
.+++
T Consensus 226 ~~d~ 229 (238)
T PF13360_consen 226 ALDL 229 (238)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8887
No 430
>PRK02888 nitrous-oxide reductase; Validated
Probab=80.14 E-value=61 Score=34.56 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=23.9
Q ss_pred ecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 256 LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 256 lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
++-+..-+.+.+||||++++..- ...+.+.++++.+.
T Consensus 317 IPVGKsPHGV~vSPDGkylyVan---klS~tVSVIDv~k~ 353 (635)
T PRK02888 317 VPVPKNPHGVNTSPDGKYFIANG---KLSPTVTVIDVRKL 353 (635)
T ss_pred EECCCCccceEECCCCCEEEEeC---CCCCcEEEEEChhh
Confidence 33344456779999999876532 23347888887543
No 431
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.66 E-value=43 Score=31.78 Aligned_cols=117 Identities=11% Similarity=0.206 Sum_probs=65.7
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g 186 (571)
...++..+|+||.+.++.+.+.. ..|..++.++.-.+++.-. +..+ +.+..+.+++ |....+|..
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p---~~iVElt~~GdlirtiPL~---g~~D--------pE~Ieyig~n~fvi~dER~~ 150 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKP---AAIVELTKEGDLIRTIPLT---GFSD--------PETIEYIGGNQFVIVDERDR 150 (316)
T ss_pred cccccceeeCCCcceEEEecCCC---ceEEEEecCCceEEEeccc---ccCC--------hhHeEEecCCEEEEEehhcc
Confidence 34488899999998777665544 3588888887655555221 1111 0111222333 555566655
Q ss_pred ccEEEEEeCCCceee----ceeec-----CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 187 FRHLYLHDINGTCLG----PITEG-----DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~----~lT~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
--.++.++.++.... .++-+ +--.+... |++.+..++|...++ | ..||.+..
T Consensus 151 ~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA-~d~~~~~l~~aKEr~-P--~~I~~~~~ 211 (316)
T COG3204 151 ALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLA-WDPVDHRLFVAKERN-P--IGIFEVTQ 211 (316)
T ss_pred eEEEEEEcCCccEEeccceEEeccccCCCCcCceeee-cCCCCceEEEEEccC-C--cEEEEEec
Confidence 434444555443211 22222 22235554 999998888876543 4 78888775
No 432
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=79.63 E-value=20 Score=37.78 Aligned_cols=73 Identities=12% Similarity=0.030 Sum_probs=43.5
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.-||+|+.||=........ -..|++|+..+-.... .+ .
T Consensus 529 ~~l~~s~~gnliASaCKS~~~e-------------------------------hAvI~lw~t~~W~~~~-~L-------~ 569 (764)
T KOG1063|consen 529 YALAISPTGNLIASACKSSLKE-------------------------------HAVIRLWNTANWLQVQ-EL-------E 569 (764)
T ss_pred EEEEecCCCCEEeehhhhCCcc-------------------------------ceEEEEEeccchhhhh-ee-------c
Confidence 3566899999887654432221 1357888877643332 11 2
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEE
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKF 139 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~ 139 (571)
.....+..+.|||||++|+.++ |+. ...||..
T Consensus 570 ~HsLTVT~l~FSpdg~~LLsvs-RDR-t~sl~~~ 601 (764)
T KOG1063|consen 570 GHSLTVTRLAFSPDGRYLLSVS-RDR-TVSLYEV 601 (764)
T ss_pred ccceEEEEEEECCCCcEEEEee-cCc-eEEeeee
Confidence 2455688899999999776653 442 2334444
No 433
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=79.61 E-value=67 Score=36.60 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=16.9
Q ss_pred CCceEEECCCCCeEEEEEEeC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDS 44 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~ 44 (571)
....+.||||++.++.++...
T Consensus 111 GI~aaswS~Dee~l~liT~~~ 131 (1265)
T KOG1920|consen 111 GISAASWSPDEELLALITGRQ 131 (1265)
T ss_pred ceEEEeecCCCcEEEEEeCCc
Confidence 357788999999999987543
No 434
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=79.47 E-value=64 Score=31.42 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=72.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE-eecC----
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELD---- 155 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~-~~~~---- 155 (571)
.+..|++++|--... + .+....+-.+.-+.||.+++..++.. . |-.--+++++++.+.. ++..
T Consensus 216 tik~We~~tg~cv~t-~-------~~h~ewvr~v~v~~DGti~As~s~dq--t--l~vW~~~t~~~k~~lR~hEh~vEci 283 (406)
T KOG0295|consen 216 TIKAWECDTGYCVKT-F-------PGHSEWVRMVRVNQDGTIIASCSNDQ--T--LRVWVVATKQCKAELREHEHPVECI 283 (406)
T ss_pred ceeEEecccceeEEe-c-------cCchHhEEEEEecCCeeEEEecCCCc--e--EEEEEeccchhhhhhhccccceEEE
Confidence 357788888754321 1 22334566678889998777665433 2 4555566776654322 2211
Q ss_pred CeeeccC--CcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 156 SWVNLHD--CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 156 ~w~~~~~--~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
.|.+... ..+.. +++-++..++....+++.-.+|-+ ..+. .--|-..+--+.+.. ++|.|++|+=.+++..
T Consensus 284 ~wap~~~~~~i~~a--t~~~~~~~~l~s~SrDktIk~wdv--~tg~cL~tL~ghdnwVr~~a-f~p~Gkyi~ScaDDkt- 357 (406)
T KOG0295|consen 284 AWAPESSYPSISEA--TGSTNGGQVLGSGSRDKTIKIWDV--STGMCLFTLVGHDNWVRGVA-FSPGGKYILSCADDKT- 357 (406)
T ss_pred EecccccCcchhhc--cCCCCCccEEEeecccceEEEEec--cCCeEEEEEecccceeeeeE-EcCCCeEEEEEecCCc-
Confidence 4543311 11110 001111126665566665444444 3443 222333233366665 9999998877766554
Q ss_pred ceeEEEEEE
Q 008274 233 LESHLYCAK 241 (571)
Q Consensus 233 ~~~~l~~~~ 241 (571)
.++|.+.
T Consensus 358 --lrvwdl~ 364 (406)
T KOG0295|consen 358 --LRVWDLK 364 (406)
T ss_pred --EEEEEec
Confidence 6666554
No 435
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=78.28 E-value=13 Score=28.31 Aligned_cols=52 Identities=10% Similarity=0.005 Sum_probs=34.4
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK 142 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~ 142 (571)
.-+|+.||.++++.+.+-- +-.+-..++.|||++.++++-... .+|.++-++
T Consensus 36 ~GRll~ydp~t~~~~vl~~---------~L~fpNGVals~d~~~vlv~Et~~---~Ri~rywl~ 87 (89)
T PF03088_consen 36 TGRLLRYDPSTKETTVLLD---------GLYFPNGVALSPDESFVLVAETGR---YRILRYWLK 87 (89)
T ss_dssp -EEEEEEETTTTEEEEEEE---------EESSEEEEEE-TTSSEEEEEEGGG---TEEEEEESS
T ss_pred CcCEEEEECCCCeEEEehh---------CCCccCeEEEcCCCCEEEEEeccC---ceEEEEEEe
Confidence 3579999999999876622 344667899999999766653322 236666554
No 436
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=77.75 E-value=40 Score=33.80 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=27.3
Q ss_pred ceeEEEEEccCCeEEEEEEeccC---------------ccEEEEEEECCCCceEEEE
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQ---------------TKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~---------------~~~~i~~~d~~~g~~~~l~ 150 (571)
+....+.|.|||++++....... ....|+++|.++++.+.+.
T Consensus 124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a 180 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVA 180 (367)
T ss_pred ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEe
Confidence 44567899999986554332110 1136999999998876554
No 437
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=76.66 E-value=7.5 Score=41.64 Aligned_cols=60 Identities=12% Similarity=0.033 Sum_probs=44.0
Q ss_pred CCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 76 SNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 76 ~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
......|.++|..+-+..+. +.+....+.+.+||||||.++.++... .|...|+-+|..-
T Consensus 552 ~~ddf~I~vvD~~t~kvvR~--------f~gh~nritd~~FS~DgrWlisasmD~----tIr~wDlpt~~lI 611 (910)
T KOG1539|consen 552 ALDDFSIRVVDVVTRKVVRE--------FWGHGNRITDMTFSPDGRWLISASMDS----TIRTWDLPTGTLI 611 (910)
T ss_pred hcCceeEEEEEchhhhhhHH--------hhccccceeeeEeCCCCcEEEEeecCC----cEEEEeccCccee
Confidence 44457788999887665433 134566788899999999888776554 3889999998753
No 438
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=76.59 E-value=64 Score=29.87 Aligned_cols=178 Identities=12% Similarity=0.059 Sum_probs=86.8
Q ss_pred EEEEEECCCCc-eEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE--EeecCCe
Q 008274 81 RLGVVSAAGGP-VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL--VEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~--~~~~~~w 157 (571)
.|++.+++.++ .+...- .+....+..++||+.-.-++.+...++ ..+|| | .+.....|. ++....
T Consensus 39 ~L~ile~~~~~gi~e~~s-------~d~~D~LfdV~Wse~~e~~~~~a~GDG-SLrl~--d-~~~~s~Pi~~~kEH~~E- 106 (311)
T KOG0277|consen 39 RLFILEVTDPKGIQECQS-------YDTEDGLFDVAWSENHENQVIAASGDG-SLRLF--D-LTMPSKPIHKFKEHKRE- 106 (311)
T ss_pred eEEEEecCCCCCeEEEEe-------eecccceeEeeecCCCcceEEEEecCc-eEEEe--c-cCCCCcchhHHHhhhhh-
Confidence 68999986433 332211 235567888999998774444444442 33444 4 222222332 211110
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
...+++.. .....+.+|.-+|.-.||..+....-.+ .+....-+-.. .|+|-..-++.+.+.++- ..|
T Consensus 107 ------V~Svdwn~--~~r~~~ltsSWD~TiKLW~~~r~~Sv~T-f~gh~~~Iy~a-~~sp~~~nlfas~Sgd~~--l~l 174 (311)
T KOG0277|consen 107 ------VYSVDWNT--VRRRIFLTSSWDGTIKLWDPNRPNSVQT-FNGHNSCIYQA-AFSPHIPNLFASASGDGT--LRL 174 (311)
T ss_pred ------eEEecccc--ccceeEEeeccCCceEeecCCCCcceEe-ecCCccEEEEE-ecCCCCCCeEEEccCCce--EEE
Confidence 00111100 1122555565577777777665443222 33333233333 388877667777666653 777
Q ss_pred EEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
+-+.. .|+ ..-+.. ......+.++.....++++....+ .++..|+
T Consensus 175 wdvr~--~gk-----~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~---~vr~wDi 220 (311)
T KOG0277|consen 175 WDVRS--PGK-----FMSIEAHNSEILCCDWSKYNHNVLATGGVDN---LVRGWDI 220 (311)
T ss_pred EEecC--CCc-----eeEEEeccceeEeecccccCCcEEEecCCCc---eEEEEeh
Confidence 77665 443 112221 112234466766666666544322 4455554
No 439
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=75.52 E-value=92 Score=31.17 Aligned_cols=157 Identities=15% Similarity=0.155 Sum_probs=79.0
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec-C
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK-T 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~-~ 185 (571)
.+..+....--|.|.+++-.+++.- +.-.|..+|..-.....+... +. +... ...||+++|..-- +
T Consensus 302 h~~~V~~ls~h~tgeYllsAs~d~~----w~Fsd~~~g~~lt~vs~~~s~-v~----~ts~----~fHpDgLifgtgt~d 368 (506)
T KOG0289|consen 302 HEEPVTGLSLHPTGEYLLSASNDGT----WAFSDISSGSQLTVVSDETSD-VE----YTSA----AFHPDGLIFGTGTPD 368 (506)
T ss_pred ccccceeeeeccCCcEEEEecCCce----EEEEEccCCcEEEEEeecccc-ce----eEEe----eEcCCceEEeccCCC
Confidence 4455556667778877766665552 445567776543332221110 00 0000 2357887776432 4
Q ss_pred CccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 186 GFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 186 g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
|. |-.+|+.++. ...+......+..+. |+.+|=+|...++ ++ .+..+||. ... .-+..++....+..+
T Consensus 369 ~~--vkiwdlks~~~~a~Fpght~~vk~i~-FsENGY~Lat~ad-d~----~V~lwDLR--Kl~-n~kt~~l~~~~~v~s 437 (506)
T KOG0289|consen 369 GV--VKIWDLKSQTNVAKFPGHTGPVKAIS-FSENGYWLATAAD-DG----SVKLWDLR--KLK-NFKTIQLDEKKEVNS 437 (506)
T ss_pred ce--EEEEEcCCccccccCCCCCCceeEEE-eccCceEEEEEec-CC----eEEEEEeh--hhc-ccceeecccccccee
Confidence 43 3444544432 334444444556654 8877744444443 32 14555662 110 012223333334667
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEE
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCS 291 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~ 291 (571)
++|...|++++...+. =.+|.+.
T Consensus 438 ~~fD~SGt~L~~~g~~----l~Vy~~~ 460 (506)
T KOG0289|consen 438 LSFDQSGTYLGIAGSD----LQVYICK 460 (506)
T ss_pred EEEcCCCCeEEeecce----eEEEEEe
Confidence 7899999998776222 2566655
No 440
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=75.19 E-value=13 Score=35.56 Aligned_cols=40 Identities=20% Similarity=0.174 Sum_probs=30.6
Q ss_pred CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 413 DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 413 ~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
....+..+..++.+.. -..++|.|+|.|-|++.|-.++..
T Consensus 73 ~~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred hHHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHH
Confidence 3456777888876653 356789999999999999877754
No 441
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=75.01 E-value=33 Score=33.86 Aligned_cols=101 Identities=11% Similarity=0.121 Sum_probs=51.5
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCC-ceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEEEecCC
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG-QRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWASEKTG 186 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g-~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~s~~~g 186 (571)
..+..+++||..+..+.+++.+. |-+-|..-. +.++| ...+|... .+ .|.|. ++++...++.
T Consensus 181 eaIRdlafSpnDskF~t~SdDg~----ikiWdf~~~kee~vL---~GHgwdVk-----sv----dWHP~kgLiasgskDn 244 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSDDGT----IKIWDFRMPKEERVL---RGHGWDVK-----SV----DWHPTKGLIASGSKDN 244 (464)
T ss_pred hhhheeccCCCCceeEEecCCCe----EEEEeccCCchhhee---ccCCCCcc-----ee----ccCCccceeEEccCCc
Confidence 45556788885555555554432 444454433 33445 23345322 11 34443 4666544443
Q ss_pred ccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 187 FRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 187 ~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
-+-+.|..++.. --|-...-.|... .|++++++|.-.+.
T Consensus 245 --lVKlWDprSg~cl~tlh~HKntVl~~-~f~~n~N~Llt~sk 284 (464)
T KOG0284|consen 245 --LVKLWDPRSGSCLATLHGHKNTVLAV-KFNPNGNWLLTGSK 284 (464)
T ss_pred --eeEeecCCCcchhhhhhhccceEEEE-EEcCCCCeeEEccC
Confidence 345567655532 2222233345555 49999977665553
No 442
>PLN02847 triacylglycerol lipase
Probab=74.66 E-value=4.2 Score=42.40 Aligned_cols=21 Identities=29% Similarity=0.232 Sum_probs=17.9
Q ss_pred CCcEEEEeechHHHHHHHHHh
Q 008274 432 VGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.-++.|.|||+||.+|..++.
T Consensus 250 dYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred CCeEEEeccChHHHHHHHHHH
Confidence 358999999999999987764
No 443
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=74.43 E-value=8.3 Score=36.71 Aligned_cols=134 Identities=15% Similarity=0.100 Sum_probs=75.8
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhh-----------hHHHHhCCcEEEEECCC-CC
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMR-----------AQYLRSKGILVWKLDNR-GT 394 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~-----------~~~l~~~G~~v~~~d~r-G~ 394 (571)
.++...-.|+|..... .. ...|+.+++-|||+.... .|. .|... ..+|.. ..++.+|.| |.
T Consensus 11 r~~a~~F~wly~~~~~-~k-s~~pl~lwlqGgpGaSst--G~G-NFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGa 83 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATAN-VK-SERPLALWLQGGPGASST--GFG-NFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGA 83 (414)
T ss_pred ecCceEEEEEeeeccc-cc-cCCCeeEEecCCCCCCCc--Ccc-chhhcCCcccCCCcCCchhhhh--ccEEEecCCCcC
Confidence 4566677777765432 11 457999999999887542 111 11111 233333 356777776 44
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHH-cCCCcCCcEEEEeechHHHHHHHHHhcC------C---CeeEEEEEc
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK-QGLAKVGHIGLYGWSYGGYLSAITLARF------P---DVFQCAVSG 464 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~~~~~------~---~~~~~~v~~ 464 (571)
|.+--+-.. .+...-.....|+.+.++.+.. ++.....+..|+-.||||-||..++... . ..|.++++.
T Consensus 84 GfSyVdg~~-~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLG 162 (414)
T KOG1283|consen 84 GFSYVDGSS-AYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALG 162 (414)
T ss_pred ceeeecCcc-cccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEcc
Confidence 432100000 0100001124677777776654 4666778999999999999998776542 1 236677776
Q ss_pred CccC
Q 008274 465 APVT 468 (571)
Q Consensus 465 ~~~~ 468 (571)
.+.+
T Consensus 163 DSWI 166 (414)
T KOG1283|consen 163 DSWI 166 (414)
T ss_pred Cccc
Confidence 6544
No 444
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=73.94 E-value=83 Score=29.91 Aligned_cols=28 Identities=18% Similarity=0.192 Sum_probs=19.2
Q ss_pred EEECCCCCEEEEEeeC----------CCCCCEEEEEEc
Q 008274 265 AVLDHNMRNFVDFHDS----------LDSPPRILLCSL 292 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~----------~~~p~~l~~~~~ 292 (571)
+.|+.+|+.++|..+. +..+|.|++...
T Consensus 299 c~fn~~G~ifaYA~gYDWSkGhe~~n~~~~~~I~l~~~ 336 (347)
T KOG0647|consen 299 CSFNRNGSIFAYALGYDWSKGHEGNNPQYKPQIFLHPV 336 (347)
T ss_pred eEecCCCCEEEEEeecccccccccCCCCCCCeEEEeec
Confidence 4888999999887653 344566666554
No 445
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=73.74 E-value=80 Score=31.79 Aligned_cols=42 Identities=5% Similarity=-0.067 Sum_probs=29.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS 130 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~ 130 (571)
.||+|.+.+|....+- ...-..+..+.+|-||+.++...+..
T Consensus 104 ~lYlWelssG~LL~v~--------~aHYQ~ITcL~fs~dgs~iiTgskDg 145 (476)
T KOG0646|consen 104 NLYLWELSSGILLNVL--------SAHYQSITCLKFSDDGSHIITGSKDG 145 (476)
T ss_pred cEEEEEeccccHHHHH--------HhhccceeEEEEeCCCcEEEecCCCc
Confidence 6999999999754321 12334578889999998777665544
No 446
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=73.57 E-value=41 Score=33.01 Aligned_cols=65 Identities=8% Similarity=0.018 Sum_probs=36.7
Q ss_pred EEEEEEECCCCc--eEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc---CccEEEEEEECCCC
Q 008274 80 VRLGVVSAAGGP--VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS---QTKLKVLKFDIKTG 144 (571)
Q Consensus 80 ~~l~~~dl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~---~~~~~i~~~d~~~g 144 (571)
..|+.+|..+.. ..+.....++.........++.+.+.+|+++++.-.... .....||.+|+...
T Consensus 184 ~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l~~a 253 (326)
T PF13449_consen 184 LRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDLSDA 253 (326)
T ss_pred EEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEcccc
Confidence 567778877522 222222111000001456788899999999766654422 24557888888753
No 447
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=73.45 E-value=4.5 Score=37.61 Aligned_cols=39 Identities=23% Similarity=0.167 Sum_probs=27.9
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 454 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~ 454 (571)
+.+..+++..+.+.. ...+|.+.|||.||.+|..+..++
T Consensus 259 ySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 259 YSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhcccc
Confidence 445555555555543 346899999999999998887665
No 448
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=73.45 E-value=4.5 Score=37.61 Aligned_cols=39 Identities=23% Similarity=0.167 Sum_probs=27.9
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 454 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~ 454 (571)
+.+..+++..+.+.. ...+|.+.|||.||.+|..+..++
T Consensus 259 ySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 259 YSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhcccc
Confidence 445555555555543 346899999999999998887665
No 449
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=73.24 E-value=54 Score=33.73 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=22.2
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR 129 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r 129 (571)
.|.+||.++++.. +++. ..+..+.||+||+.+++.+..
T Consensus 127 ~i~~yDw~~~~~i~~i~v-----------~~vk~V~Ws~~g~~val~t~~ 165 (443)
T PF04053_consen 127 FICFYDWETGKLIRRIDV-----------SAVKYVIWSDDGELVALVTKD 165 (443)
T ss_dssp EEEEE-TTT--EEEEESS------------E-EEEEE-TTSSEEEEE-S-
T ss_pred CEEEEEhhHcceeeEEec-----------CCCcEEEEECCCCEEEEEeCC
Confidence 4889999987654 3322 125678999999998888644
No 450
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=72.96 E-value=1.3e+02 Score=31.62 Aligned_cols=108 Identities=12% Similarity=0.191 Sum_probs=59.5
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
....+.+++|--+|.+++.++.... ...|++.++.....+.-..-..+ - .....|.|. ..++|++.+
T Consensus 520 ~~k~i~~vtWHrkGDYlatV~~~~~-~~~VliHQLSK~~sQ~PF~kskG-~-vq~v~FHPs--------~p~lfVaTq-- 586 (733)
T KOG0650|consen 520 HPKSIRQVTWHRKGDYLATVMPDSG-NKSVLIHQLSKRKSQSPFRKSKG-L-VQRVKFHPS--------KPYLFVATQ-- 586 (733)
T ss_pred cCCccceeeeecCCceEEEeccCCC-cceEEEEecccccccCchhhcCC-c-eeEEEecCC--------CceEEEEec--
Confidence 3556778899999999988876553 33577777765443311110111 0 001122221 124555433
Q ss_pred ccEEEEEeCCCcee--eceeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 187 FRHLYLHDINGTCL--GPITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 187 ~~~l~~~~~~~~~~--~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
.++.++++..... +.+|. ...+..+ ++++.|+.|+..+...
T Consensus 587 -~~vRiYdL~kqelvKkL~tg-~kwiS~m-sihp~GDnli~gs~d~ 629 (733)
T KOG0650|consen 587 -RSVRIYDLSKQELVKKLLTG-SKWISSM-SIHPNGDNLILGSYDK 629 (733)
T ss_pred -cceEEEehhHHHHHHHHhcC-Ceeeeee-eecCCCCeEEEecCCC
Confidence 3466777655432 34443 3345555 4899999888887654
No 451
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=72.52 E-value=82 Score=29.21 Aligned_cols=240 Identities=12% Similarity=0.063 Sum_probs=114.4
Q ss_pred EEEEcc--CCeEEEEEEeccC--ccEEEEEEECCCCc-eEEEEE-eecCCeeeccCCcccCCCCCccC--CCeEEEEEec
Q 008274 113 RVNWMH--GNILTAQVLNRSQ--TKLKVLKFDIKTGQ-RKVILV-EELDSWVNLHDCFTPLDKGVTKY--SGGFIWASEK 184 (571)
Q Consensus 113 ~~~wsp--Dg~~i~~~~~r~~--~~~~i~~~d~~~g~-~~~l~~-~~~~~w~~~~~~~~~~~~~~~~~--~d~~~~~s~~ 184 (571)
.+.||| ++++.+.....-+ +...|++.++..++ .+.+.. +..++-.+ - .|+ .+..++....
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~Lfd------V-----~Wse~~e~~~~~a~G 81 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFD------V-----AWSENHENQVIAASG 81 (311)
T ss_pred eeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeE------e-----eecCCCcceEEEEec
Confidence 578998 5664443332221 34469999986433 222211 11221111 1 222 3346666666
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCceE
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGKH 263 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~ 263 (571)
+|--+||-.....+.+..+-....++-++- |++-.+..+.+++-++. .+|+..+. ..+ +..... ..-.+
T Consensus 82 DGSLrl~d~~~~s~Pi~~~kEH~~EV~Svd-wn~~~r~~~ltsSWD~T--iKLW~~~r--~~S-----v~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 82 DGSLRLFDLTMPSKPIHKFKEHKREVYSVD-WNTVRRRIFLTSSWDGT--IKLWDPNR--PNS-----VQTFNGHNSCIY 151 (311)
T ss_pred CceEEEeccCCCCcchhHHHhhhhheEEec-cccccceeEEeeccCCc--eEeecCCC--Ccc-----eEeecCCccEEE
Confidence 776556554333333333333444565553 88888888888876663 77776654 221 212221 11234
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeE-EEEEcCCCcEEEEEEEcCCCC
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDI-VQIQANDGTVLYGALYKPDES 342 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~dg~~l~~~~~~P~~~ 342 (571)
.+.+||.---++.++|+... -.|+-+.. .|+.. .+..-+ .....-.+.+... +..+..-+..+.+|-++--
T Consensus 152 ~a~~sp~~~nlfas~Sgd~~-l~lwdvr~-~gk~~-~i~ah~---~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~-- 223 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASGDGT-LRLWDVRS-PGKFM-SIEAHN---SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL-- 223 (311)
T ss_pred EEecCCCCCCeEEEccCCce-EEEEEecC-CCcee-EEEecc---ceeEeecccccCCcEEEecCCCceEEEEehhhc--
Confidence 55788854445555555332 24443333 24433 232211 1222334444433 4444444456888766532
Q ss_pred CCCCCCceEEEE-EcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCC
Q 008274 343 RYGPPPYKTLIS-VYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNR 392 (571)
Q Consensus 343 ~~~~~~~P~vv~-~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~r 392 (571)
+.|+-++ -||- ..+. -.|++.. +..|+.. .+.|-..|+-
T Consensus 224 -----r~pl~eL~gh~~-AVRk--vk~Sph~---~~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 224 -----RTPLFELNGHGL-AVRK--VKFSPHH---ASLLASASYDMTVRIWDPE 265 (311)
T ss_pred -----cccceeecCCce-EEEE--EecCcch---hhHhhhccccceEEecccc
Confidence 2365443 3332 2222 2344322 4556654 4556666654
No 452
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=72.17 E-value=90 Score=29.55 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=50.3
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY 106 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~ 106 (571)
++.|||...+|.|+...++.+..+.+.... ..+.+.|...++.-++... -..
T Consensus 193 aV~Wsp~~e~vLatgsaDg~irlWDiRras-----------------------gcf~~lD~hn~k~~p~~~~-----n~a 244 (397)
T KOG4283|consen 193 AVEWSPSSEWVLATGSADGAIRLWDIRRAS-----------------------GCFRVLDQHNTKRPPILKT-----NTA 244 (397)
T ss_pred EEEeccCceeEEEecCCCceEEEEEeeccc-----------------------ceeEEeecccCccCccccc-----ccc
Confidence 567999999999977766665444432111 1345666655422111100 012
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
..+-+...+|+.||..++...-.+ ++-.-+.+.|+-
T Consensus 245 h~gkvngla~tSd~~~l~~~gtd~----r~r~wn~~~G~n 280 (397)
T KOG4283|consen 245 HYGKVNGLAWTSDARYLASCGTDD----RIRVWNMESGRN 280 (397)
T ss_pred ccceeeeeeecccchhhhhccCcc----ceEEeecccCcc
Confidence 345677889999999776653222 255556666653
No 453
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=71.57 E-value=53 Score=32.40 Aligned_cols=159 Identities=12% Similarity=0.034 Sum_probs=74.5
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEE------CCC-----CceEEEEEeecCCeeeccCCcccCCCCCcc
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFD------IKT-----GQRKVILVEELDSWVNLHDCFTPLDKGVTK 173 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d------~~~-----g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~ 173 (571)
+.....+..+.|+|+|.+++...+.. ..-||... .++ .+...+.+.... .. ...+. +.|
T Consensus 62 s~H~~aVN~vRf~p~gelLASg~D~g--~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~-h~--~diyd-----L~W 131 (434)
T KOG1009|consen 62 SRHTRAVNVVRFSPDGELLASGGDGG--EVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRG-HR--DDIYD-----LAW 131 (434)
T ss_pred cCCcceeEEEEEcCCcCeeeecCCCc--eEEEEEecCcCCccccchhhhCccceEEEEEecc-cc--cchhh-----hhc
Confidence 45667788899999998777654333 22233322 223 111111110000 00 00111 156
Q ss_pred CCCeEEEEEecCCccEEEEEeCCCceeeceeec-CeEEEEEEEEeecCcEEEEEEcCCCCc------eeEEEEEEe----
Q 008274 174 YSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPL------ESHLYCAKL---- 242 (571)
Q Consensus 174 ~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~------~~~l~~~~l---- 242 (571)
++|+.+..+.. +-.-++++|...++...+-.+ .-.+... .|+|-++++.-.+....+. .+-++++..
T Consensus 132 s~d~~~l~s~s-~dns~~l~Dv~~G~l~~~~~dh~~yvqgv-awDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~ 209 (434)
T KOG1009|consen 132 SPDSNFLVSGS-VDNSVRLWDVHAGQLLAILDDHEHYVQGV-AWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMP 209 (434)
T ss_pred cCCCceeeeee-ccceEEEEEeccceeEeecccccccccee-ecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEee
Confidence 67764333322 234467777777765444333 3334444 4988888777666543211 112222221
Q ss_pred CCCCCCCCCCCeEecCCCc----eEEEEECCCCCEEE
Q 008274 243 YPDWNHTLEAPVKLTNGKG----KHVAVLDHNMRNFV 275 (571)
Q Consensus 243 ~~~g~~~~~~~~~lt~~~g----~~~~~~s~~g~~~v 275 (571)
...+.+.+....+|.+++. ....+|+|||..++
T Consensus 210 ~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llv 246 (434)
T KOG1009|consen 210 AKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLV 246 (434)
T ss_pred ecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEE
Confidence 0011112234445555432 23448889988776
No 454
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=70.46 E-value=10 Score=37.12 Aligned_cols=62 Identities=18% Similarity=0.053 Sum_probs=50.5
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHH---------------cC-----CC-eeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVA---------------AR-----KP-YEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~---------------~~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
.++||..|..|.+|+....+++.++|.- .| .+ .++..+-++||.. . ..++..++.+.
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV-~-~qP~~al~m~~ 311 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA-E-YRPNETFIMFQ 311 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCC-C-cCHHHHHHHHH
Confidence 5999999999999999999999988851 11 23 7888888999987 3 47888888888
Q ss_pred HHHHH
Q 008274 565 EFIER 569 (571)
Q Consensus 565 ~fl~~ 569 (571)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 88864
No 455
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=69.75 E-value=86 Score=28.29 Aligned_cols=64 Identities=13% Similarity=0.142 Sum_probs=32.1
Q ss_pred EEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 215 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 215 ~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.++|.|+ |..++..+.. --||-+. +|. .+++.. .....-.+.|||.. ++..+++... .|-+.++
T Consensus 238 ~vdpsgr-ll~sg~~dss--c~lydir---g~r----~iq~f~phsadir~vrfsp~a-~yllt~syd~---~ikltdl 302 (350)
T KOG0641|consen 238 AVDPSGR-LLASGHADSS--CMLYDIR---GGR----MIQRFHPHSADIRCVRFSPGA-HYLLTCSYDM---KIKLTDL 302 (350)
T ss_pred EECCCcc-eeeeccCCCc--eEEEEee---CCc----eeeeeCCCccceeEEEeCCCc-eEEEEecccc---eEEEeec
Confidence 4888886 4445544442 5566543 222 222332 22334455889865 4445555432 3444444
No 456
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=69.43 E-value=1.5e+02 Score=31.99 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=26.4
Q ss_pred cEEEEEeCCCceeeceeecCeEE-EEEE--EEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 188 RHLYLHDINGTCLGPITEGDWMV-EQIV--GVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 188 ~~l~~~~~~~~~~~~lT~~~~~~-~~~~--~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
++|.++++++++.+.+=++...- .+++ ..+|.|-+|..+.+. ..|..++.
T Consensus 618 rnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsd-----ktl~~~Df 670 (1080)
T KOG1408|consen 618 RNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSD-----KTLCFVDF 670 (1080)
T ss_pred cceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecC-----CceEEEEe
Confidence 46778888877765554443221 2232 356666544444433 33445555
No 457
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=69.12 E-value=1.2e+02 Score=29.75 Aligned_cols=185 Identities=16% Similarity=0.107 Sum_probs=86.3
Q ss_pred ceeEEEEEccCCeEEEEEEeccC--ccEEEEEEECCC--CceEEEEEeecCCeeec-cCCcc---cCCCCCccCCCe-EE
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQ--TKLKVLKFDIKT--GQRKVILVEELDSWVNL-HDCFT---PLDKGVTKYSGG-FI 179 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~--~~~~i~~~d~~~--g~~~~l~~~~~~~w~~~-~~~~~---~~~~~~~~~~d~-~~ 179 (571)
+.++.+.|.|++..++.++++.. +...+|..++.. +....+.......-.+. +..|. ....+....+++ ++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 45678899965555555555543 234566555543 22222211110000000 01110 111122233444 44
Q ss_pred EEEecC----CccEEEEEeCCCceeecee-ec--------------CeEEEEEEEEeecCcEEEEEEcC----CCCce--
Q 008274 180 WASEKT----GFRHLYLHDINGTCLGPIT-EG--------------DWMVEQIVGVNEASGQVYFTGTL----DGPLE-- 234 (571)
Q Consensus 180 ~~s~~~----g~~~l~~~~~~~~~~~~lT-~~--------------~~~~~~~~~~s~dg~~l~~~~~~----~~~~~-- 234 (571)
+.++.. ....|+.++.+|...+.+. .. +.-.+.. .+++||+.||..... ++...
T Consensus 100 is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~l-a~~~dG~~l~~~~E~~l~~d~~~~~~ 178 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGL-AVSPDGRTLFAAMESPLKQDGPRANP 178 (326)
T ss_pred EEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEE-EECCCCCEEEEEECccccCCCccccc
Confidence 443332 0378999998865544441 11 1223445 489999988887763 22222
Q ss_pred -----eEEEEEEeCCCCCCCCCCCeEec------CCCceEEEEECCCCCEEEEEeeCC---CCCCEEEEEEcCC
Q 008274 235 -----SHLYCAKLYPDWNHTLEAPVKLT------NGKGKHVAVLDHNMRNFVDFHDSL---DSPPRILLCSLQD 294 (571)
Q Consensus 235 -----~~l~~~~l~~~g~~~~~~~~~lt------~~~g~~~~~~s~~g~~~v~~~s~~---~~p~~l~~~~~~~ 294 (571)
..|++.+....+.....-.-++. ...+.....+-++++.+|...... ..--.||.+++..
T Consensus 179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l~~ 252 (326)
T PF13449_consen 179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDLSD 252 (326)
T ss_pred ccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEccc
Confidence 56777776321210000111122 122334456677888777766532 2335677777643
No 458
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=69.04 E-value=45 Score=36.82 Aligned_cols=128 Identities=16% Similarity=0.188 Sum_probs=63.4
Q ss_pred EEEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc----CccEEEEEEECCCCceEEEEEeec
Q 008274 80 VRLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS----QTKLKVLKFDIKTGQRKVILVEEL 154 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~----~~~~~i~~~d~~~g~~~~l~~~~~ 154 (571)
..||.+||+.|+...- .. .....-..+.|+.|.. ...+.. -+.+.||++|+.-..-+.+.. ..
T Consensus 504 ~~ly~mDLe~GKVV~eW~~----------~~~~~v~~~~p~~K~a-qlt~e~tflGls~n~lfriDpR~~~~k~v~~-~~ 571 (794)
T PF08553_consen 504 NKLYKMDLERGKVVEEWKV----------HDDIPVVDIAPDSKFA-QLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS-QS 571 (794)
T ss_pred CceEEEecCCCcEEEEeec----------CCCcceeEeccccccc-ccCCCceEEEECCCceEEeccCCCCCceeec-cc
Confidence 4689999998887532 22 1111134566665411 111110 023459999998543222221 11
Q ss_pred CCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceee-cCeEEEEEEEEeecCcEEEEEEc
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITE-GDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
..+. ....|+-. .-+.+|.+.+....|- |.+++.-|.. .+.|.. |+ .+..+ .++.||++|+.+..
T Consensus 572 k~Y~-~~~~Fs~~----aTt~~G~iavgs~~G~--IRLyd~~g~~AKT~lp~lG~-pI~~i-Dvt~DGkwilaTc~ 638 (794)
T PF08553_consen 572 KQYS-SKNNFSCF----ATTEDGYIAVGSNKGD--IRLYDRLGKRAKTALPGLGD-PIIGI-DVTADGKWILATCK 638 (794)
T ss_pred cccc-cCCCceEE----EecCCceEEEEeCCCc--EEeecccchhhhhcCCCCCC-CeeEE-EecCCCcEEEEeec
Confidence 1121 11223222 2246676666666664 4455544433 244443 33 34444 37899999988864
No 459
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=68.50 E-value=97 Score=28.44 Aligned_cols=112 Identities=13% Similarity=0.067 Sum_probs=52.8
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCce---EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCcc
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR---KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~---~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~ 188 (571)
..+.|+.|.|.+.+...-+ -..+-|.+|..||.. +.|....... +.-.+.+.+...+.++.+|++.-+| .
T Consensus 161 Ngl~Wd~d~K~fY~iDsln-~~V~a~dyd~~tG~~snr~~i~dlrk~~-----~~e~~~PDGm~ID~eG~L~Va~~ng-~ 233 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLN-YEVDAYDYDCPTGDLSNRKVIFDLRKSQ-----PFESLEPDGMTIDTEGNLYVATFNG-G 233 (310)
T ss_pred ccccccccCcEEEEEccCc-eEEeeeecCCCcccccCcceeEEeccCC-----CcCCCCCCcceEccCCcEEEEEecC-c
Confidence 3468999998766663322 222338888999864 3344332210 1001111111223445555444333 3
Q ss_pred EEEEEeCCCceee-ceeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 189 HLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 189 ~l~~~~~~~~~~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
.++++|+.++++- .+--..-.+.+...--++=+.+|.+++++
T Consensus 234 ~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~aa~ 276 (310)
T KOG4499|consen 234 TVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVTTAAK 276 (310)
T ss_pred EEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEEehhc
Confidence 5788888777531 11111112344431222224566666543
No 460
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=68.44 E-value=9.8 Score=35.53 Aligned_cols=33 Identities=15% Similarity=0.012 Sum_probs=25.4
Q ss_pred CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 259 ~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
.++...+++||||+.+|.+..+. .|.+.+++.-
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG----~lsLW~iPsL 261 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSG----SLSLWEIPSL 261 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCC----eEEEEecCcc
Confidence 45677889999999999887664 6777776543
No 461
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=68.15 E-value=10 Score=34.93 Aligned_cols=23 Identities=26% Similarity=0.508 Sum_probs=19.4
Q ss_pred cCCcEEEEeechHHHHHHHHHhc
Q 008274 431 KVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
..+++.|+|+|+|+.++...+.+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHH
Confidence 56789999999999999876644
No 462
>KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only]
Probab=68.00 E-value=82 Score=31.15 Aligned_cols=87 Identities=10% Similarity=0.072 Sum_probs=46.0
Q ss_pred cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCce-EEE
Q 008274 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGK-HVA 265 (571)
Q Consensus 188 ~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~-~~~ 265 (571)
..|+++|..++..+.|-.+-.=...+ ..|+|++.+.|.-+.. ..+-+.-+ .|.+ ....+.... .+|. .+.
T Consensus 199 GRl~~YD~~tK~~~VLld~L~F~NGl-aLS~d~sfvl~~Et~~----~ri~rywi--~g~k-~gt~EvFa~~LPG~PDNI 270 (376)
T KOG1520|consen 199 GRLFRYDPSTKVTKVLLDGLYFPNGL-ALSPDGSFVLVAETTT----ARIKRYWI--KGPK-AGTSEVFAEGLPGYPDNI 270 (376)
T ss_pred cceEEecCcccchhhhhhcccccccc-cCCCCCCEEEEEeecc----ceeeeeEe--cCCc-cCchhhHhhcCCCCCcce
Confidence 35778887777666555442212333 4899999988886543 33444444 2220 001123332 2332 234
Q ss_pred EECCCCCEEEEEeeCCC
Q 008274 266 VLDHNMRNFVDFHDSLD 282 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~ 282 (571)
..+++|.+-|-..+..+
T Consensus 271 R~~~~G~fWVal~~~~~ 287 (376)
T KOG1520|consen 271 RRDSTGHFWVALHSKRS 287 (376)
T ss_pred eECCCCCEEEEEecccc
Confidence 55678877666555443
No 463
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=67.74 E-value=73 Score=32.49 Aligned_cols=160 Identities=9% Similarity=0.034 Sum_probs=76.5
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE-eecC-Ce
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELD-SW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~-~~~~-~w 157 (571)
+.|-+|||+.-..+ +..+ ++-..-.....+-|||.|+.+.+...++ |.+.|+......+-.. .+++ ..
T Consensus 487 stlsiWDLAapTpr-ikae-----ltssapaCyALa~spDakvcFsccsdGn----I~vwDLhnq~~VrqfqGhtDGasc 556 (705)
T KOG0639|consen 487 STLSIWDLAAPTPR-IKAE-----LTSSAPACYALAISPDAKVCFSCCSDGN----IAVWDLHNQTLVRQFQGHTDGASC 556 (705)
T ss_pred ceeeeeeccCCCcc-hhhh-----cCCcchhhhhhhcCCccceeeeeccCCc----EEEEEcccceeeecccCCCCCcee
Confidence 46889999975543 2221 1212223345678999986554444332 7777887654322111 1111 01
Q ss_pred eeccCCcccCCCCCccCCCeE-EEEEecCCc-cEEEEEeCCCceeeceeecCeEEEE-EEEEeecCcEEEEEEcCCCCce
Q 008274 158 VNLHDCFTPLDKGVTKYSGGF-IWASEKTGF-RHLYLHDINGTCLGPITEGDWMVEQ-IVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~-~~~s~~~g~-~~l~~~~~~~~~~~~lT~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
++. ++|+. +|+ .|. .-+.-.|+. +.+++-..+|.... ..+..|.+.+|.+-...
T Consensus 557 Idi-------------s~dGtklWT---GGlDntvRcWDlr--egrqlqqhdF~SQIfSLg~cP~~dWlavGMen----- 613 (705)
T KOG0639|consen 557 IDI-------------SKDGTKLWT---GGLDNTVRCWDLR--EGRQLQQHDFSSQIFSLGYCPTGDWLAVGMEN----- 613 (705)
T ss_pred EEe-------------cCCCceeec---CCCccceeehhhh--hhhhhhhhhhhhhheecccCCCccceeeeccc-----
Confidence 111 12221 111 111 122233432 23455555543211 12467888888765422
Q ss_pred eEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEe
Q 008274 235 SHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFH 278 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~ 278 (571)
.++..... .++ .--+|.. +....+..|++-|+++|-+.
T Consensus 614 s~vevlh~--skp----~kyqlhlheScVLSlKFa~cGkwfvStG 652 (705)
T KOG0639|consen 614 SNVEVLHT--SKP----EKYQLHLHESCVLSLKFAYCGKWFVSTG 652 (705)
T ss_pred CcEEEEec--CCc----cceeecccccEEEEEEecccCceeeecC
Confidence 34444444 333 3334443 23345668899999987543
No 464
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=67.67 E-value=54 Score=33.70 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=21.2
Q ss_pred EEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 113 RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 113 ~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
.++|.|||++++...... .|++++..++..+.+
T Consensus 34 ~maflPDG~llVtER~~G----~I~~v~~~~~~~~~~ 66 (454)
T TIGR03606 34 ALLWGPDNQLWVTERATG----KILRVNPETGEVKVV 66 (454)
T ss_pred EEEEcCCCeEEEEEecCC----EEEEEeCCCCceeee
Confidence 478999997554433222 488888877665433
No 465
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=66.94 E-value=53 Score=35.05 Aligned_cols=105 Identities=11% Similarity=0.000 Sum_probs=53.2
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE--------EEEEeec--------CCeeeccCCcccCCCCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK--------VILVEEL--------DSWVNLHDCFTPLDKGVTK 173 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~--------~l~~~~~--------~~w~~~~~~~~~~~~~~~~ 173 (571)
.+..+.||+|.+.+.|....+. +.++|.++.=.+ .++...+ -.|... ...++
T Consensus 158 ~l~hv~ws~D~~~~Lf~~ange----~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g--~~~~v------ 225 (1189)
T KOG2041|consen 158 LLAHVLWSEDLEQALFKKANGE----THLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTG--PYQPV------ 225 (1189)
T ss_pred eccceeecccHHHHHhhhcCCc----EEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccC--ccccC------
Confidence 4557899999997776544332 555565543111 1111111 122211 11111
Q ss_pred CCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 174 YSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 174 ~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
.||. .+.+.-..|.-+|.+- ....++..+..|- .+.+. .|+++|..|.+.++.
T Consensus 226 ~pdrP~lavcy~nGr~QiMR~-eND~~Pvv~dtgm-~~vga-kWnh~G~vLAvcG~~ 279 (1189)
T KOG2041|consen 226 PPDRPRLAVCYANGRMQIMRS-ENDPEPVVVDTGM-KIVGA-KWNHNGAVLAVCGND 279 (1189)
T ss_pred CCCCCEEEEEEcCceehhhhh-cCCCCCeEEeccc-Eeecc-eecCCCcEEEEccCc
Confidence 2444 3334445565555443 2334444444443 33344 499999999998874
No 466
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=66.58 E-value=1.2e+02 Score=28.91 Aligned_cols=117 Identities=19% Similarity=0.223 Sum_probs=62.1
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~ 185 (571)
..+.+-.++|-|.|.+++.-.++. .+-++|++|-++-.-.. ++.+-.. ...-+ ..++ ..++.+..++
T Consensus 215 d~~~vrsiSfHPsGefllvgTdHp----~~rlYdv~T~Qcfvsan-Pd~qht~---ai~~V----~Ys~t~~lYvTaSkD 282 (430)
T KOG0640|consen 215 DTEPVRSISFHPSGEFLLVGTDHP----TLRLYDVNTYQCFVSAN-PDDQHTG---AITQV----RYSSTGSLYVTASKD 282 (430)
T ss_pred ccceeeeEeecCCCceEEEecCCC----ceeEEeccceeEeeecC-ccccccc---ceeEE----EecCCccEEEEeccC
Confidence 445677889999999877765444 36777888877643222 2111000 00000 1122 3477777777
Q ss_pred CccEEEEEe-CCCceeeceee--cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 186 GFRHLYLHD-INGTCLGPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 186 g~~~l~~~~-~~~~~~~~lT~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
|--. ++| ..+...+-+.. +..++.+.. |+.+|++|.-++. +. -..||.+.
T Consensus 283 G~Ik--lwDGVS~rCv~t~~~AH~gsevcSa~-Ftkn~kyiLsSG~-DS--~vkLWEi~ 335 (430)
T KOG0640|consen 283 GAIK--LWDGVSNRCVRTIGNAHGGSEVCSAV-FTKNGKYILSSGK-DS--TVKLWEIS 335 (430)
T ss_pred CcEE--eeccccHHHHHHHHhhcCCceeeeEE-EccCCeEEeecCC-cc--eeeeeeec
Confidence 7433 344 23333333322 344666665 8888887665443 22 25555543
No 467
>PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=66.52 E-value=80 Score=30.06 Aligned_cols=101 Identities=12% Similarity=0.050 Sum_probs=64.4
Q ss_pred CccEEEEEeCCCceeeceeecCe--------EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec
Q 008274 186 GFRHLYLHDINGTCLGPITEGDW--------MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT 257 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~~--------~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt 257 (571)
-++||-.+|.+.++.+.|-+..+ +|.++. .+|=.+.|++...+.+ .+..||+++. .+. +.++|.
T Consensus 76 KYSHVH~yd~e~~~VrLLWkesih~~~~WaGEVSdIl-YdP~~D~LLlAR~DGh-~nLGvy~ldr--~~g----~~~~L~ 147 (339)
T PF09910_consen 76 KYSHVHEYDTENDSVRLLWKESIHDKTKWAGEVSDIL-YDPYEDRLLLARADGH-ANLGVYSLDR--RTG----KAEKLS 147 (339)
T ss_pred ccceEEEEEcCCCeEEEEEecccCCccccccchhhee-eCCCcCEEEEEecCCc-ceeeeEEEcc--cCC----ceeecc
Confidence 47888889988888888876532 455665 7888888888876555 5899999987 333 677777
Q ss_pred CCCceEEEEECCCCCEEEEEee-CCCCCCEEEEEEcCCCce
Q 008274 258 NGKGKHVAVLDHNMRNFVDFHD-SLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 258 ~~~g~~~~~~s~~g~~~v~~~s-~~~~p~~l~~~~~~~~~~ 297 (571)
..+..-. ..-.| +..|... -....+.|..+|+.+++.
T Consensus 148 ~~ps~KG-~~~~D--~a~F~i~~~~~g~~~i~~~Dli~~~~ 185 (339)
T PF09910_consen 148 SNPSLKG-TLVHD--YACFGINNFHKGVSGIHCLDLISGKW 185 (339)
T ss_pred CCCCcCc-eEeee--eEEEeccccccCCceEEEEEccCCeE
Confidence 6542111 11112 1222221 123456889999877775
No 468
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=64.65 E-value=1.4e+02 Score=28.75 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=43.1
Q ss_pred EEEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEcc-CC---eEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 80 VRLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMH-GN---ILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 80 ~~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wsp-Dg---~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
.+|.++|+++++.. .+.+. + .......++..++.-. ++ ...|+.++-... -|.++|+++|+.+++..
T Consensus 34 pKLv~~Dl~t~~li~~~~~p--~-~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~--glIV~dl~~~~s~Rv~~ 105 (287)
T PF03022_consen 34 PKLVAFDLKTNQLIRRYPFP--P-DIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGP--GLIVYDLATGKSWRVLH 105 (287)
T ss_dssp -EEEEEETTTTCEEEEEE----C-CCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTC--EEEEEETTTTEEEEEET
T ss_pred cEEEEEECCCCcEEEEEECC--h-HHcccccccceEEEEccCCCCcceEEEEeCCCcC--cEEEEEccCCcEEEEec
Confidence 47999999998763 44442 1 1223455666666654 22 267777766543 69999999999888754
No 469
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=64.39 E-value=34 Score=35.49 Aligned_cols=52 Identities=10% Similarity=0.102 Sum_probs=34.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
.|.+||...+..+.... .-....++|.|||..++....+++ |...|++-+..
T Consensus 282 SiiLyD~~~~~t~~~ka----------~~~P~~iaWHp~gai~~V~s~qGe----lQ~FD~ALspi 333 (545)
T PF11768_consen 282 SIILYDTTRGVTLLAKA----------EFIPTLIAWHPDGAIFVVGSEQGE----LQCFDMALSPI 333 (545)
T ss_pred eEEEEEcCCCeeeeeee----------cccceEEEEcCCCcEEEEEcCCce----EEEEEeecCcc
Confidence 57788888775543322 223456799999988777766663 66667665543
No 470
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=64.15 E-value=1.9e+02 Score=30.26 Aligned_cols=66 Identities=3% Similarity=-0.063 Sum_probs=43.5
Q ss_pred CCCCCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 73 AGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 73 ~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
+...++..+..+|....++.+++...+ .+-...+...+++|+.+.++.-...+. |..+|...+..+
T Consensus 229 s~~g~~~~d~ciYE~~r~klqrvsvts-----ipL~s~v~~ca~sp~E~kLvlGC~DgS----iiLyD~~~~~t~ 294 (545)
T PF11768_consen 229 SVKGEPSADSCIYECSRNKLQRVSVTS-----IPLPSQVICCARSPSEDKLVLGCEDGS----IILYDTTRGVTL 294 (545)
T ss_pred CCCCCceeEEEEEEeecCceeEEEEEE-----EecCCcceEEecCcccceEEEEecCCe----EEEEEcCCCeee
Confidence 344446667777888877777665431 123345566789999987777665553 888898877544
No 471
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=64.11 E-value=1.2e+02 Score=27.77 Aligned_cols=176 Identities=14% Similarity=0.046 Sum_probs=79.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE-EEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI-LVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l-~~~~~~~w~~ 159 (571)
.|+.+|+++|+..+-... +.. ....+ -..+++ +++..... .|+.+|+++|+..-- ...... ..
T Consensus 47 ~l~~~d~~tG~~~W~~~~-------~~~-~~~~~-~~~~~~-v~v~~~~~----~l~~~d~~tG~~~W~~~~~~~~-~~- 110 (238)
T PF13360_consen 47 NLYALDAKTGKVLWRFDL-------PGP-ISGAP-VVDGGR-VYVGTSDG----SLYALDAKTGKVLWSIYLTSSP-PA- 110 (238)
T ss_dssp EEEEEETTTSEEEEEEEC-------SSC-GGSGE-EEETTE-EEEEETTS----EEEEEETTTSCEEEEEEE-SSC-TC-
T ss_pred EEEEEECCCCCEEEEeec-------ccc-cccee-eecccc-ccccccee----eeEecccCCcceeeeecccccc-cc-
Confidence 689999999886544221 111 11112 233444 33333211 699999999986432 221111 00
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee---eceeecC--eE-------EEEEEEEeecCcEEEEEE
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL---GPITEGD--WM-------VEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~---~~lT~~~--~~-------~~~~~~~s~dg~~l~~~~ 227 (571)
....... +...++.+++. .. -.+|+.+|+.+|+. ..+.... .. ...+. ++ ++ .+|+..
T Consensus 111 --~~~~~~~--~~~~~~~~~~~-~~--~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~v~~~~ 180 (238)
T PF13360_consen 111 --GVRSSSS--PAVDGDRLYVG-TS--SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPV-IS-DG-RVYVSS 180 (238)
T ss_dssp --STB--SE--EEEETTEEEEE-ET--CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEE-CC-TT-EEEEEC
T ss_pred --ccccccC--ceEecCEEEEE-ec--cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceE-EE-CC-EEEEEc
Confidence 0000000 01122334333 32 34688888777664 2221111 11 11221 22 34 565554
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
.... ++.+++ ... +.. -..........+..++..++... . -..++.+++.+|+..
T Consensus 181 ~~g~-----~~~~d~--~tg----~~~-w~~~~~~~~~~~~~~~~~l~~~~-~---~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 181 GDGR-----VVAVDL--ATG----EKL-WSKPISGIYSLPSVDGGTLYVTS-S---DGRLYALDLKTGKVV 235 (238)
T ss_dssp CTSS-----EEEEET--TTT----EEE-EEECSS-ECECEECCCTEEEEEE-T---TTEEEEEETTTTEEE
T ss_pred CCCe-----EEEEEC--CCC----CEE-EEecCCCccCCceeeCCEEEEEe-C---CCEEEEEECCCCCEE
Confidence 3332 566676 222 111 11111222222556666665544 2 258999999888753
No 472
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=63.96 E-value=13 Score=38.58 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=49.7
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHH-----------------c----C-----C-----CeeEEEcCCCCCCCCCCC
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVA-----------------A----R-----K-----PYEILIFPDERHMPRRHR 554 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~-----------------~----~-----~-----~~~~~~~~~~~H~~~~~~ 554 (571)
.++||++|..|.+|+....+++.++|.= . | . +..++.++++||.. ..+
T Consensus 365 ikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~v-p~d 443 (462)
T PTZ00472 365 VRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMV-PMD 443 (462)
T ss_pred ceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccC-hhh
Confidence 6999999999999999888888887740 0 1 2 57788889999987 446
Q ss_pred cHHHHHHHHHHHHHH
Q 008274 555 DRIYMEERIWEFIER 569 (571)
Q Consensus 555 ~~~~~~~~i~~fl~~ 569 (571)
..+...+.+..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 677888888888753
No 473
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=63.71 E-value=48 Score=35.98 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=36.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
.|.+|-+++++.+.|. --...+..+.||||+...+.+...+ +|.++.+.+-+.
T Consensus 274 VLv~Wq~~T~~kqfLP---------RLgs~I~~i~vS~ds~~~sl~~~DN----qI~li~~~dl~~ 326 (792)
T KOG1963|consen 274 VLVLWQLETGKKQFLP---------RLGSPILHIVVSPDSDLYSLVLEDN----QIHLIKASDLEI 326 (792)
T ss_pred EEEEEeecCCCccccc---------ccCCeeEEEEEcCCCCeEEEEecCc----eEEEEeccchhh
Confidence 5778889988854441 1345677899999999877776654 377777665543
No 474
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=63.30 E-value=40 Score=34.59 Aligned_cols=131 Identities=12% Similarity=0.129 Sum_probs=64.1
Q ss_pred EEEEEEECCCCceEE-EeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec---cCccEEEEEEECCCCceEEEEEeecC
Q 008274 80 VRLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR---SQTKLKVLKFDIKTGQRKVILVEELD 155 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r---~~~~~~i~~~d~~~g~~~~l~~~~~~ 155 (571)
..||-.|++.|+... ..+ ..-+..+...||++..=+.+.. +-.++.||++|+.-...-.|.-....
T Consensus 356 ~~l~klDIE~GKIVeEWk~----------~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~k 425 (644)
T KOG2395|consen 356 DKLYKLDIERGKIVEEWKF----------EDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSK 425 (644)
T ss_pred CcceeeecccceeeeEeec----------cCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecc
Confidence 578999999988652 222 2225667788888722111100 01244599999873221123222222
Q ss_pred CeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 156 SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 156 ~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
.+... .-|+-. .-..+|.+.+....|- |.+++.-+.. .+.|..-.-.+..+ ..+.||++|+.+..
T Consensus 426 qy~~k-~nFsc~----aTT~sG~IvvgS~~Gd--IRLYdri~~~AKTAlPgLG~~I~hV-dvtadGKwil~Tc~ 491 (644)
T KOG2395|consen 426 QYSTK-NNFSCF----ATTESGYIVVGSLKGD--IRLYDRIGRRAKTALPGLGDAIKHV-DVTADGKWILATCK 491 (644)
T ss_pred ccccc-ccccee----eecCCceEEEeecCCc--EEeehhhhhhhhhcccccCCceeeE-EeeccCcEEEEecc
Confidence 22211 111111 1135566666666564 4455543322 23444322233333 36779998887753
No 475
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=63.11 E-value=1.6e+02 Score=28.99 Aligned_cols=125 Identities=13% Similarity=0.112 Sum_probs=58.4
Q ss_pred CCceeEEEEEccC----CeEEEEEEec----cCccEEEEEEECCCC-----ceEEEEEe-ec--CCeeeccCCcccCCCC
Q 008274 107 DEEYLARVNWMHG----NILTAQVLNR----SQTKLKVLKFDIKTG-----QRKVILVE-EL--DSWVNLHDCFTPLDKG 170 (571)
Q Consensus 107 ~~~~~~~~~wspD----g~~i~~~~~r----~~~~~~i~~~d~~~g-----~~~~l~~~-~~--~~w~~~~~~~~~~~~~ 170 (571)
.+..+..+++.|+ +.+++..+.. ......|.++....+ +.+.|... .. ..... ...
T Consensus 47 ~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~--------g~~ 118 (331)
T PF07995_consen 47 GERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHN--------GGG 118 (331)
T ss_dssp TTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS---------EEE
T ss_pred ccCCcccceeccccCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCC--------Ccc
Confidence 4556677888885 6655555433 123456877777655 22333322 22 11000 001
Q ss_pred CccCCCeEEEEEec------------CCccEEEEEeCCCc-------------eeeceeecCeEEEEEEEEeecCcEEEE
Q 008274 171 VTKYSGGFIWASEK------------TGFRHLYLHDINGT-------------CLGPITEGDWMVEQIVGVNEASGQVYF 225 (571)
Q Consensus 171 ~~~~~d~~~~~s~~------------~g~~~l~~~~~~~~-------------~~~~lT~~~~~~~~~~~~s~dg~~l~~ 225 (571)
..+.+|+.++++.- .....|.+++.++. ..+..+.|-.+...+. |+|....||.
T Consensus 119 l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~p~dnP~~~~~~~~~~i~A~GlRN~~~~~-~d~~tg~l~~ 197 (331)
T PF07995_consen 119 LAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSIPADNPFVGDDGADSEIYAYGLRNPFGLA-FDPNTGRLWA 197 (331)
T ss_dssp EEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB-TTSTTTTSTTSTTTEEEE--SEEEEEE-EETTTTEEEE
T ss_pred ccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCcCCCCCccccCCCceEEEEEeCCCccccEE-EECCCCcEEE
Confidence 13456675554321 11367889987765 2233444544444554 8888556666
Q ss_pred EEcCCCCceeEEEEEE
Q 008274 226 TGTLDGPLESHLYCAK 241 (571)
Q Consensus 226 ~~~~~~~~~~~l~~~~ 241 (571)
.-+-.+. .-.|..+.
T Consensus 198 ~d~G~~~-~dein~i~ 212 (331)
T PF07995_consen 198 ADNGPDG-WDEINRIE 212 (331)
T ss_dssp EEE-SSS-SEEEEEE-
T ss_pred EccCCCC-CcEEEEec
Confidence 5442221 24454443
No 476
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=63.05 E-value=45 Score=32.00 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=44.7
Q ss_pred CCcEEEEECCCCCCCChhh--------hHHHHhc-cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 382 KGILVWKLDNRGTARRGLK--------FEASIKH-NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 382 ~G~~v~~~d~rG~~~~~~~--------~~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.|-.+++.=-.|.|..|-+ +.....+ ..+......+..|..+|+.... ..++|.++|.|-|++.+--+|.
T Consensus 63 d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 63 DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHH
Confidence 5667777666665543321 1111111 1222235678889999988743 4679999999999999976665
Q ss_pred c
Q 008274 453 R 453 (571)
Q Consensus 453 ~ 453 (571)
.
T Consensus 142 m 142 (423)
T COG3673 142 M 142 (423)
T ss_pred H
Confidence 3
No 477
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=62.66 E-value=9.3 Score=37.40 Aligned_cols=84 Identities=17% Similarity=0.078 Sum_probs=49.6
Q ss_pred EEEEECCC-CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH-cCCCcCCcEEEEeechHHHHHHHHHhc----C----
Q 008274 385 LVWKLDNR-GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK-QGLAKVGHIGLYGWSYGGYLSAITLAR----F---- 454 (571)
Q Consensus 385 ~v~~~d~r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~~~~----~---- 454 (571)
.++-+|.| |.|.|-.........+ ...++|+..+++.+.+ .+........|.|.||||..+-.++.. .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d--~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGD--ISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCcccc--HHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccccc
Confidence 47788887 5554421100000000 0123566666665544 355567889999999999877655532 1
Q ss_pred --CCeeEEEEEcCccCCc
Q 008274 455 --PDVFQCAVSGAPVTSW 470 (571)
Q Consensus 455 --~~~~~~~v~~~~~~~~ 470 (571)
+--+++++.+.|+++.
T Consensus 81 ~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 81 EPPINLQGYMLGNPVTYM 98 (319)
T ss_pred CCceeeeEEEeCCCCCCc
Confidence 1247888888888764
No 478
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=62.58 E-value=2e+02 Score=30.07 Aligned_cols=15 Identities=13% Similarity=0.033 Sum_probs=12.0
Q ss_pred EEEEEECCCCceEEE
Q 008274 81 RLGVVSAAGGPVSWM 95 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~ 95 (571)
.|+.+|+++|+..+-
T Consensus 312 ~l~ald~~tG~~~W~ 326 (488)
T cd00216 312 FFYVLDRTTGKLISA 326 (488)
T ss_pred eEEEEECCCCcEeeE
Confidence 488999999987654
No 479
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=62.32 E-value=16 Score=37.42 Aligned_cols=136 Identities=18% Similarity=0.149 Sum_probs=73.5
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cch--------------hhhHHHHhCCcEEEEECC
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVD--------------MRAQYLRSKGILVWKLDN 391 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~--------------~~~~~l~~~G~~v~~~d~ 391 (571)
.+..+..+++.... .++..|+|+++-|||+.......|.. -+. .....+. +-..++.+|.
T Consensus 48 ~~~~lfy~f~es~~---~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~-~~anllfiDq 123 (433)
T PLN03016 48 ENVQFFYYFIKSEN---NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWT-KMANIIFLDQ 123 (433)
T ss_pred CCeEEEEEEEecCC---CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchh-hcCcEEEecC
Confidence 35567777766543 23567999999999987642211100 000 0000111 2257888895
Q ss_pred C-CCCCChhhhHHHHhccCCC-CCchhHHHHHHHHHH-cCCCcCCcEEEEeechHHHHHHHHHhc----C------CCee
Q 008274 392 R-GTARRGLKFEASIKHNCGR-IDAEDQLTGAEWLIK-QGLAKVGHIGLYGWSYGGYLSAITLAR----F------PDVF 458 (571)
Q Consensus 392 r-G~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~~~~----~------~~~~ 458 (571)
| |.|.|-..... ....+ ..++|+..+++...+ .+..-..++.|.|.||||..+-.++.. . +--+
T Consensus 124 PvGtGfSy~~~~~---~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inL 200 (433)
T PLN03016 124 PVGSGFSYSKTPI---DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINL 200 (433)
T ss_pred CCCCCccCCCCCC---CccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccc
Confidence 5 55543211000 00011 112455555554443 344456789999999999866555432 1 1246
Q ss_pred EEEEEcCccCCc
Q 008274 459 QCAVSGAPVTSW 470 (571)
Q Consensus 459 ~~~v~~~~~~~~ 470 (571)
++++.+.|+++.
T Consensus 201 kGi~iGNg~t~~ 212 (433)
T PLN03016 201 QGYMLGNPVTYM 212 (433)
T ss_pred eeeEecCCCcCc
Confidence 888888887653
No 480
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=61.56 E-value=1.6e+02 Score=31.41 Aligned_cols=113 Identities=16% Similarity=0.130 Sum_probs=62.1
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEe-ecCCeeeccCCcccCCCCCccCCCe-EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE-ELDSWVNLHDCFTPLDKGVTKYSGG-FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~-~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~ 183 (571)
+.+.-+..+.|.|++..|+..+.. +..-|+.=|-.+|-....... +..+ .....|.. -|++++ +++...
T Consensus 265 GHeDWV~sv~W~p~~~~LLSASaD--ksmiiW~pd~~tGiWv~~vRlGe~gg--~a~GF~g~-----lw~~n~~~ii~~g 335 (764)
T KOG1063|consen 265 GHEDWVYSVWWHPEGLDLLSASAD--KSMIIWKPDENTGIWVDVVRLGEVGG--SAGGFWGG-----LWSPNSNVIIAHG 335 (764)
T ss_pred CcccceEEEEEccchhhheecccC--cceEEEecCCccceEEEEEEeecccc--cccceeeE-----EEcCCCCEEEEec
Confidence 455677889999999544433322 233466666666655433221 1110 00011111 245555 555667
Q ss_pred cCCccEEEEEeCCCcee--eceeecCe-EEEEEEEEeecCcEEEEEEcC
Q 008274 184 KTGFRHLYLHDINGTCL--GPITEGDW-MVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~--~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~ 229 (571)
+.|-.|+|. +-+.... +..++|.. .|.++. |+|.|.+|.-.+.+
T Consensus 336 ~~Gg~hlWk-t~d~~~w~~~~~iSGH~~~V~dv~-W~psGeflLsvs~D 382 (764)
T KOG1063|consen 336 RTGGFHLWK-TKDKTFWTQEPVISGHVDGVKDVD-WDPSGEFLLSVSLD 382 (764)
T ss_pred ccCcEEEEe-ccCccceeeccccccccccceeee-ecCCCCEEEEeccc
Confidence 788888998 3333333 44455543 466765 99999976666553
No 481
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=61.55 E-value=6.6 Score=30.95 Aligned_cols=15 Identities=27% Similarity=0.379 Sum_probs=12.2
Q ss_pred EEECCCCCeEEEEEE
Q 008274 28 YWWSLDSKFIAFTQV 42 (571)
Q Consensus 28 ~~wSPDg~~iay~~~ 42 (571)
-.|||||++|.|+=.
T Consensus 73 HvfSpDG~~lSFTYN 87 (122)
T PF12566_consen 73 HVFSPDGSWLSFTYN 87 (122)
T ss_pred eEECCCCCEEEEEec
Confidence 459999999999643
No 482
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=60.43 E-value=28 Score=22.84 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=21.0
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEEC
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDI 141 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~ 141 (571)
.+..+.|+|...+|+..++.++ |+++.+
T Consensus 13 ~v~~~~w~P~mdLiA~~t~~g~----v~v~Rl 40 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIALGTEDGE----VLVYRL 40 (47)
T ss_pred cEEEEEECCCCCEEEEEECCCe----EEEEEC
Confidence 4557899999999998887653 555555
No 483
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=60.28 E-value=2e+02 Score=29.26 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=56.9
Q ss_pred EEEEEEECCCCceEE-EeccCCCCCCCCCCc-eeEEEEEccCCe-EEEEEEeccCccEEEEEEEC-CCCce--EE-EEEe
Q 008274 80 VRLGVVSAAGGPVSW-MDLQCGGTDQNYDEE-YLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDI-KTGQR--KV-ILVE 152 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~-~~g~~--~~-l~~~ 152 (571)
.+|.+||+.+.+.++ +++. .++ ....+.|..|-+ -..|+..--. +.||++-- +.|+. +. |.-.
T Consensus 222 ~~l~vWD~~~r~~~Q~idLg--------~~g~~pLEvRflH~P~~~~gFvg~aLs--s~i~~~~k~~~g~W~a~kVi~ip 291 (461)
T PF05694_consen 222 HSLHVWDWSTRKLLQTIDLG--------EEGQMPLEVRFLHDPDANYGFVGCALS--SSIWRFYKDDDGEWAAEKVIDIP 291 (461)
T ss_dssp -EEEEEETTTTEEEEEEES---------TTEEEEEEEEE-SSTT--EEEEEEE----EEEEEEEE-ETTEEEEEEEEEE-
T ss_pred CeEEEEECCCCcEeeEEecC--------CCCCceEEEEecCCCCccceEEEEecc--ceEEEEEEcCCCCeeeeEEEECC
Confidence 589999999987654 4542 233 334566766543 3334332222 22444433 34442 33 3221
Q ss_pred --ecCCee-ecc-CCcccCCCCC----ccCCCeEEEEEecCCccEEEEEeCCCceeeceee-----cCe-----------
Q 008274 153 --ELDSWV-NLH-DCFTPLDKGV----TKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE-----GDW----------- 208 (571)
Q Consensus 153 --~~~~w~-~~~-~~~~~~~~~~----~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~-----~~~----------- 208 (571)
...+|. +.- +.|..++.-+ ...+|+|+++|+- +..+|..+|+.....-.|+. +..
T Consensus 292 ~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W-~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~ 370 (461)
T PF05694_consen 292 AKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNW-LHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGK 370 (461)
T ss_dssp -EE--SS---GGGGGG-EE------EEE-TTS-EEEEEET-TTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS---
T ss_pred CcccCcccccccccccccCCCceEeEEEccCCCEEEEEcc-cCCcEEEEecCCCCCCcEEeEEEECcEeccCCCcccccc
Confidence 222453 110 1111111100 1235568877765 23467778765532222221 100
Q ss_pred EE---EEEEEEeecCcEEEEEEcC
Q 008274 209 MV---EQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 209 ~~---~~~~~~s~dg~~l~~~~~~ 229 (571)
.+ .+.+..|.||++||++.+.
T Consensus 371 ~l~GgPqMvqlS~DGkRlYvTnSL 394 (461)
T PF05694_consen 371 RLRGGPQMVQLSLDGKRLYVTNSL 394 (461)
T ss_dssp ---S----EEE-TTSSEEEEE---
T ss_pred ccCCCCCeEEEccCCeEEEEEeec
Confidence 01 1234588999999999984
No 484
>PRK13614 lipoprotein LpqB; Provisional
Probab=60.19 E-value=2.4e+02 Score=30.13 Aligned_cols=160 Identities=12% Similarity=0.035 Sum_probs=86.4
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccE
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRH 189 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~ 189 (571)
....++-|+||+.+++.... ...++.... ++..+.+.... .+.. ++|+.++.+|...++...+
T Consensus 344 ~~~s~avS~~g~~~A~~~~~---~~~l~~~~~-g~~~~~~~~g~---------~Lt~----PS~d~~g~vWtv~~g~~~~ 406 (573)
T PRK13614 344 GPASPAESPVSQTVAFLNGS---RTTLYTVSP-GQPARALTSGS---------TLTR----PSFSPQDWVWTAGPGGNGR 406 (573)
T ss_pred cccceeecCCCceEEEecCC---CcEEEEecC-CCcceeeecCC---------CccC----CcccCCCCEEEeeCCCCce
Confidence 55678899999988887432 235666665 33444443321 1111 2567777888776654456
Q ss_pred EEEEeCCCc-eee-----ceeec---CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-
Q 008274 190 LYLHDINGT-CLG-----PITEG---DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG- 259 (571)
Q Consensus 190 l~~~~~~~~-~~~-----~lT~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~- 259 (571)
|.++..++. +.. .+... .-.+..+ .+|+||-.+.+....++.....+..+--..+| .++.|+..
T Consensus 407 vv~~~~~g~~~~~~~~~~~v~~~~l~g~~I~~l-rvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G-----~P~~L~~~~ 480 (573)
T PRK13614 407 IVAYRPTGVAEGAQAPTVTLTADWLAGRTVKEL-RVSREGVRALVISEQNGKSRVQVAGIVRNEDG-----TPRELTAPI 480 (573)
T ss_pred EEEEecCCCcccccccceeecccccCCCeeEEE-EECCCccEEEEEEEeCCccEEEEEEEEeCCCC-----CeEEccCce
Confidence 666654331 111 11111 1135555 59999999988876666434455445442233 34444432
Q ss_pred -----CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 260 -----KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 260 -----~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
....+.+|..+++.++.. +....-...+++.+.
T Consensus 481 ~~~~~~~~~sl~W~~~~sl~V~~-~~~~~~~~~~~v~v~ 518 (573)
T PRK13614 481 TLAADSDADTGAWVGDSTVVVTK-ASATSNVVPELLSVD 518 (573)
T ss_pred ecccCCCcceeEEcCCCEEEEEe-ccCCCcceEEEEEeC
Confidence 123345777777644444 443444456666663
No 485
>PLN02209 serine carboxypeptidase
Probab=60.16 E-value=19 Score=37.00 Aligned_cols=143 Identities=16% Similarity=0.165 Sum_probs=75.7
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cchh--------------hhHHHHhCCcE
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDM--------------RAQYLRSKGIL 385 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~--------------~~~~l~~~G~~ 385 (571)
+.+....+..+..+++.... .++..|+|+++-|||+.......|.. -+.. ....+. +-..
T Consensus 44 ~~v~~~~~~~lf~~f~es~~---~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~-~~an 119 (437)
T PLN02209 44 IGIGEEENVQFFYYFIKSDK---NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWT-KTAN 119 (437)
T ss_pred EEecCCCCeEEEEEEEecCC---CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchh-hcCc
Confidence 34433345567776665443 23567999999999987653222110 0000 000111 2246
Q ss_pred EEEECCC-CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc----C-----
Q 008274 386 VWKLDNR-GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR----F----- 454 (571)
Q Consensus 386 v~~~d~r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~----~----- 454 (571)
++.+|.| |.|.|-.... ..... -..+.+|+..+++.+.++ +.....++.|+|.||||..+-.++.. .
T Consensus 120 llfiDqPvGtGfSy~~~~-~~~~~-~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTP-IERTS-DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred EEEecCCCCCCccCCCCC-CCccC-CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 8888855 4444311100 00000 011235565665554443 44455689999999999866555432 1
Q ss_pred -CCeeEEEEEcCccCCc
Q 008274 455 -PDVFQCAVSGAPVTSW 470 (571)
Q Consensus 455 -~~~~~~~v~~~~~~~~ 470 (571)
+-.+++++.+.|+++.
T Consensus 198 ~~inl~Gi~igng~td~ 214 (437)
T PLN02209 198 PPINLQGYVLGNPITHI 214 (437)
T ss_pred CceeeeeEEecCcccCh
Confidence 1246788888887763
No 486
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=59.78 E-value=1.6e+02 Score=27.81 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=65.1
Q ss_pred ceEEEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC
Q 008274 78 VKVRLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS 156 (571)
Q Consensus 78 ~~~~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~ 156 (571)
+++.|..+|+++|+.... .+ +....-..++-..| .|+.++=+.+ ..+.+|.++-+...=..-...+
T Consensus 66 G~S~l~~~d~~tg~~~~~~~l--------~~~~FgEGit~~~d--~l~qLTWk~~---~~f~yd~~tl~~~~~~~y~~EG 132 (264)
T PF05096_consen 66 GQSSLRKVDLETGKVLQSVPL--------PPRYFGEGITILGD--KLYQLTWKEG---TGFVYDPNTLKKIGTFPYPGEG 132 (264)
T ss_dssp TEEEEEEEETTTSSEEEEEE---------TTT--EEEEEEETT--EEEEEESSSS---EEEEEETTTTEEEEEEE-SSS-
T ss_pred CcEEEEEEECCCCcEEEEEEC--------CccccceeEEEECC--EEEEEEecCC---eEEEEccccceEEEEEecCCcc
Confidence 468999999999987533 33 23334444555544 4444443332 3799999986543211212334
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce---eeceeecCeEEE---EEEEEeecCcEEEEEEcCC
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVE---QIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~---~~~~~s~dg~~l~~~~~~~ 230 (571)
|- +..++ ..+++|+ |-..|+.+|+++-+ ..++|.+...+. +..++ ++.||.--..
T Consensus 133 WG------------Lt~dg-~~Li~SD--GS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i---~G~IyANVW~- 193 (264)
T PF05096_consen 133 WG------------LTSDG-KRLIMSD--GSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI---NGKIYANVWQ- 193 (264)
T ss_dssp -E------------EEECS-SCEEEE---SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE---TTEEEEEETT-
T ss_pred eE------------EEcCC-CEEEEEC--CccceEEECCcccceEEEEEEEECCEECCCcEeEEEE---cCEEEEEeCC-
Confidence 42 12122 2444553 56789999876532 224454443332 23222 3456665543
Q ss_pred CCceeEEEEEEe
Q 008274 231 GPLESHLYCAKL 242 (571)
Q Consensus 231 ~~~~~~l~~~~l 242 (571)
...|.+++.
T Consensus 194 ---td~I~~Idp 202 (264)
T PF05096_consen 194 ---TDRIVRIDP 202 (264)
T ss_dssp ---SSEEEEEET
T ss_pred ---CCeEEEEeC
Confidence 357888887
No 487
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=59.15 E-value=37 Score=35.59 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=23.4
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
...+|-|||+.+++--..+ .|-++|+++|.
T Consensus 66 ~sL~W~~DGkllaVg~kdG----~I~L~Dve~~~ 95 (665)
T KOG4640|consen 66 ASLCWRPDGKLLAVGFKDG----TIRLHDVEKGG 95 (665)
T ss_pred eeeeecCCCCEEEEEecCC----eEEEEEccCCC
Confidence 4679999999877654443 39999999886
No 488
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=58.85 E-value=67 Score=31.61 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=20.4
Q ss_pred EEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEE
Q 008274 113 RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILV 151 (571)
Q Consensus 113 ~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~ 151 (571)
.++|.|||++++ +.+.. .|++++ ..|.. ..+..
T Consensus 6 ~~a~~pdG~l~v--~e~~G---~i~~~~-~~g~~~~~v~~ 39 (331)
T PF07995_consen 6 SMAFLPDGRLLV--AERSG---RIWVVD-KDGSLKTPVAD 39 (331)
T ss_dssp EEEEETTSCEEE--EETTT---EEEEEE-TTTEECEEEEE
T ss_pred EEEEeCCCcEEE--EeCCc---eEEEEe-CCCcCcceecc
Confidence 478999998644 34432 488888 44443 44443
No 489
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=58.69 E-value=1.7e+02 Score=27.97 Aligned_cols=57 Identities=7% Similarity=-0.038 Sum_probs=36.7
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
|.+||+++-+-..-...+ .+....+..+.+|+.|+.++..+..+. |-+.|--++.|.
T Consensus 240 ~rlYdv~T~QcfvsanPd-----~qht~ai~~V~Ys~t~~lYvTaSkDG~----IklwDGVS~rCv 296 (430)
T KOG0640|consen 240 LRLYDVNTYQCFVSANPD-----DQHTGAITQVRYSSTGSLYVTASKDGA----IKLWDGVSNRCV 296 (430)
T ss_pred eeEEeccceeEeeecCcc-----cccccceeEEEecCCccEEEEeccCCc----EEeeccccHHHH
Confidence 567888876543222210 123457888999999998887766553 666677766653
No 490
>PRK13615 lipoprotein LpqB; Provisional
Probab=58.60 E-value=2.5e+02 Score=29.86 Aligned_cols=120 Identities=10% Similarity=-0.062 Sum_probs=59.9
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEecCCc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKTGF 187 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~ 187 (571)
.+..|+|.++| .++...+.. ...+.. .-.+|+...+. -.|..... ..-+ ..++|| +.++.+..|-
T Consensus 374 ~Lt~PS~d~~g-~vWtv~~g~--~~~l~~-~~~~G~~~~v~----v~~~~~~~-I~~l----rvSrDG~R~Avi~~~~g~ 440 (557)
T PRK13615 374 GLVAPSLDAQG-YVWSTPASD--PRGLVA-WGPDGVGHPVA----VSWTATGR-VVSL----EVARDGARVLVQLETGAG 440 (557)
T ss_pred ccccCcCcCCC-CEEEEeCCC--ceEEEE-ecCCCceEEee----ccccCCCe-eEEE----EeCCCccEEEEEEecCCC
Confidence 46678999998 444333222 223333 23345554331 13432111 1111 124454 7777777666
Q ss_pred cEEEE--EeCCCceeece-eec------CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 188 RHLYL--HDINGTCLGPI-TEG------DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 188 ~~l~~--~~~~~~~~~~l-T~~------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
.+|++ +-.+++..+.| |.. --.+.+.. |..+++ |...+...+ .+.+++.+++ +|.
T Consensus 441 ~~V~va~V~R~~~~P~~L~~~p~~l~~~l~~v~sl~-W~~~~~-laVl~~~~~-~~~~v~~v~v--~g~ 504 (557)
T PRK13615 441 PQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDAT-WVDELD-VATLTLAPD-GERQVELHQV--GGP 504 (557)
T ss_pred CEEEEEEEEeCCCcceEeeeccEEcccCcCcceeeE-EcCCCE-EEEEeccCC-CCceEEEEEC--CCc
Confidence 66766 33345544555 432 11334444 876665 555543333 3577888998 554
No 491
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=57.86 E-value=1.8e+02 Score=27.95 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=16.0
Q ss_pred EEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 214 VGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 214 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
+.|+|.|.+.++..... ..+|..+
T Consensus 174 v~w~~~Gd~F~v~~~~~----i~i~q~d 197 (362)
T KOG0294|consen 174 VSWSPQGDHFVVSGRNK----IDIYQLD 197 (362)
T ss_pred eEEcCCCCEEEEEeccE----EEEEecc
Confidence 46999999877776432 4555544
No 492
>PRK13613 lipoprotein LpqB; Provisional
Probab=57.81 E-value=2.7e+02 Score=29.99 Aligned_cols=167 Identities=14% Similarity=0.033 Sum_probs=88.1
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-----EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-----KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-----~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
....++-|+||..++++.... ..++.-.+..+.. +.+... ..+.. ++|+.++.+|..++
T Consensus 364 ~~~s~avS~~g~~~A~v~~~~---~~l~vg~~~~~~~~~~~~~~~~~~---------~~Lt~----PS~d~~g~vWtvd~ 427 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISADG---DSVYVGSLTPGASIGVHSWGVTAD---------GRLTS----PSWDGRGDLWVVDR 427 (599)
T ss_pred CccceEEcCCCceEEEEcCCC---cEEEEeccCCCCccccccceeecc---------CcccC----CcCcCCCCEEEecC
Confidence 566788999999888875322 2466655543332 122111 11111 25677777777655
Q ss_pred --CCccEEEEEeCCCceeeceeecC---eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC
Q 008274 185 --TGFRHLYLHDINGTCLGPITEGD---WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG 259 (571)
Q Consensus 185 --~g~~~l~~~~~~~~~~~~lT~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~ 259 (571)
.+.+-|..+.. +++...+.... ..+..+ .+|+||-.+.+.....+....++..+.-..+|...+..++.+...
T Consensus 428 ~~~~~~vl~v~~~-~G~~~~V~~~~l~g~~I~~l-rvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~ 505 (599)
T PRK13613 428 DPADPRLLWLLQG-DGEPVEVRTPELDGHRVVAV-RVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPE 505 (599)
T ss_pred CCCCceEEEEEcC-CCcEEEeeccccCCCEeEEE-EECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccC
Confidence 22333555543 44443343321 145555 599999999998876554445566655422332122334444332
Q ss_pred -CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 260 -KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 260 -~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
......+|..+++.+|...+.... ..++++++ +|.
T Consensus 506 l~~v~~~~W~~~~sL~Vlg~~~~~~-~~v~~v~v-dG~ 541 (599)
T PRK13613 506 LEDVTDMSWAGDSQLVVLGREEGGV-QQARYVQV-DGS 541 (599)
T ss_pred CCccceeEEcCCCEEEEEeccCCCC-cceEEEec-CCc
Confidence 123455788887655544444322 23666666 444
No 493
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=57.43 E-value=74 Score=27.79 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=12.3
Q ss_pred CceEEECCCCCeEEEEE
Q 008274 25 KTGYWWSLDSKFIAFTQ 41 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~ 41 (571)
...+.||.||+ ||.++
T Consensus 7 ~~~l~WS~Dg~-laV~t 22 (173)
T PF12657_consen 7 PNALAWSEDGQ-LAVAT 22 (173)
T ss_pred CcCeeECCCCC-EEEEc
Confidence 46899999995 76654
No 494
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=57.24 E-value=2e+02 Score=28.34 Aligned_cols=102 Identities=17% Similarity=0.134 Sum_probs=56.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEe--ecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE--ELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~--~~~~w~ 158 (571)
.|.+||+.+|..+.- + .....+..+..+|..++|+--+... .|-+.|+.++.-..+... ....|+
T Consensus 282 TIk~WDletg~~~~~-~--------~~~ksl~~i~~~~~~~Ll~~gssdr----~irl~DPR~~~gs~v~~s~~gH~nwV 348 (423)
T KOG0313|consen 282 TIKVWDLETGGLKST-L--------TTNKSLNCISYSPLSKLLASGSSDR----HIRLWDPRTGDGSVVSQSLIGHKNWV 348 (423)
T ss_pred eEEEEEeecccceee-e--------ecCcceeEeecccccceeeecCCCC----ceeecCCCCCCCceeEEeeecchhhh
Confidence 478899998765422 1 1456777889999887666543332 278889988764433322 122465
Q ss_pred eccCCcccCCCCCccCCC-eEEEEEec-CCccEEEEEeCCCceeeceee
Q 008274 159 NLHDCFTPLDKGVTKYSG-GFIWASEK-TGFRHLYLHDINGTCLGPITE 205 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d-~~~~~s~~-~g~~~l~~~~~~~~~~~~lT~ 205 (571)
.. + .|++. .+.|+|-. ++.-.||=+....+..-.|+.
T Consensus 349 ss------v----kwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~ 387 (423)
T KOG0313|consen 349 SS------V----KWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG 387 (423)
T ss_pred hh------e----ecCCCCceEEEEEecCCeEEEEEeccCCCcceeecc
Confidence 32 1 23443 47776644 555555544433333333433
No 495
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=56.34 E-value=26 Score=28.07 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=21.0
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCc
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV 361 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~ 361 (571)
+.....++... +|..|+.....+... ...|+ |++||.|++
T Consensus 65 lN~~phf~t~I-~g~~iHFih~rs~~~----~aiPL-ll~HGWPgS 104 (112)
T PF06441_consen 65 LNSFPHFKTEI-DGLDIHFIHVRSKRP----NAIPL-LLLHGWPGS 104 (112)
T ss_dssp HTTS-EEEEEE-TTEEEEEEEE--S-T----T-EEE-EEE--SS--
T ss_pred HHcCCCeeEEE-eeEEEEEEEeeCCCC----CCeEE-EEECCCCcc
Confidence 34455566666 689999988887552 34455 558999987
No 496
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=56.17 E-value=2.3e+02 Score=28.67 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=25.7
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
..+..++-|+||+++++- .+++ .|.+.|.++++....
T Consensus 203 keil~~avS~Dgkylatg-g~d~---~v~Iw~~~t~ehv~~ 239 (479)
T KOG0299|consen 203 KEILTLAVSSDGKYLATG-GRDR---HVQIWDCDTLEHVKV 239 (479)
T ss_pred ceeEEEEEcCCCcEEEec-CCCc---eEEEecCcccchhhc
Confidence 456678899999988775 3332 366778888887654
No 497
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=55.64 E-value=2.3e+02 Score=28.43 Aligned_cols=156 Identities=12% Similarity=0.025 Sum_probs=70.9
Q ss_pred eEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEecC-Ccc--EEEEEeC
Q 008274 121 ILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKT-GFR--HLYLHDI 195 (571)
Q Consensus 121 ~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~-g~~--~l~~~~~ 195 (571)
+.+++.++... -|+.+|+++.+.+.+. .+...+.+-+..+. ..+.. ++..|+|+ |.. .||.++.
T Consensus 68 kSlIigTdK~~---GL~VYdL~Gk~lq~~~---~Gr~NNVDvrygf~-----l~g~~vDlavas~R~~g~n~l~~f~id~ 136 (381)
T PF02333_consen 68 KSLIIGTDKKG---GLYVYDLDGKELQSLP---VGRPNNVDVRYGFP-----LNGKTVDLAVASDRSDGRNSLRLFRIDP 136 (381)
T ss_dssp G-EEEEEETTT---EEEEEETTS-EEEEE----SS-EEEEEEEEEEE-----ETTEEEEEEEEEE-CCCT-EEEEEEEET
T ss_pred cceEEEEeCCC---CEEEEcCCCcEEEeec---CCCcceeeeeccee-----cCCceEEEEEEecCcCCCCeEEEEEecC
Confidence 34444444332 3999999998877663 22333332222211 11222 67788885 443 5777887
Q ss_pred CCceeeceeecCe-------EEEE-EEEEeec-CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEE
Q 008274 196 NGTCLGPITEGDW-------MVEQ-IVGVNEA-SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAV 266 (571)
Q Consensus 196 ~~~~~~~lT~~~~-------~~~~-~~~~s~d-g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~ 266 (571)
+++..+.++.... ++-. +.+-++. |+...|....++ ..+-|++....+|...-..++.+.-......|.
T Consensus 137 ~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G--~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCV 214 (381)
T PF02333_consen 137 DTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDG--RVEQYELTDDGDGKVSATLVREFKVGSQPEGCV 214 (381)
T ss_dssp TTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTS--EEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEE
T ss_pred CCCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCc--eEEEEEEEeCCCCcEeeEEEEEecCCCcceEEE
Confidence 7777777764321 1222 2233543 555555555555 366677665222311111244444433445555
Q ss_pred ECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 267 LDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 267 ~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
+.....+ +|+.... --|+.+...
T Consensus 215 VDDe~g~-LYvgEE~---~GIW~y~Ae 237 (381)
T PF02333_consen 215 VDDETGR-LYVGEED---VGIWRYDAE 237 (381)
T ss_dssp EETTTTE-EEEEETT---TEEEEEESS
T ss_pred EecccCC-EEEecCc---cEEEEEecC
Confidence 5544333 3444432 256666653
No 498
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=54.98 E-value=26 Score=33.45 Aligned_cols=34 Identities=9% Similarity=0.191 Sum_probs=19.6
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK 142 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~ 142 (571)
..+++-.-.|||||+-|+..+..+ -..+|.+..+
T Consensus 48 p~nf~kgckWSPDGSciL~~sedn--~l~~~nlP~d 81 (406)
T KOG2919|consen 48 PLNFLKGCKWSPDGSCILSLSEDN--CLNCWNLPFD 81 (406)
T ss_pred chhhhccceeCCCCceEEeecccC--eeeEEecChh
Confidence 345666679999999544443322 2345555444
No 499
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=54.50 E-value=2.4e+02 Score=28.40 Aligned_cols=43 Identities=5% Similarity=-0.092 Sum_probs=29.7
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS 130 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~ 130 (571)
..+.+||+++|+...... .....+....|-|-.-.+......+
T Consensus 266 ~TV~lWD~~~g~p~~s~~--------~~~k~Vq~l~wh~~~p~~LLsGs~D 308 (463)
T KOG0270|consen 266 KTVKLWDVDTGKPKSSIT--------HHGKKVQTLEWHPYEPSVLLSGSYD 308 (463)
T ss_pred ceEEEEEcCCCCcceehh--------hcCCceeEEEecCCCceEEEecccc
Confidence 357889999998876532 2456778889999876555544444
No 500
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=52.99 E-value=54 Score=36.83 Aligned_cols=138 Identities=12% Similarity=0.166 Sum_probs=72.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEEC--CCCceEEEEEeecCCe
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDI--KTGQRKVILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~--~~g~~~~l~~~~~~~w 157 (571)
...+||+...+. .+.+.. ......++.+.|-||+. .++..++.++. .-|-+-|+ .+...+.++.+..+ -
T Consensus 185 ~~~iWDlr~~~p-ii~ls~-----~~~~~~~S~l~WhP~~aTql~~As~dd~~-PviqlWDlR~assP~k~~~~H~~G-i 256 (1049)
T KOG0307|consen 185 RAVIWDLRKKKP-IIKLSD-----TPGRMHCSVLAWHPDHATQLLVASGDDSA-PVIQLWDLRFASSPLKILEGHQRG-I 256 (1049)
T ss_pred CceeccccCCCc-cccccc-----CCCccceeeeeeCCCCceeeeeecCCCCC-ceeEeecccccCCchhhhcccccc-e
Confidence 345677776532 122221 23345678899999997 67776665543 23444443 34444444333322 1
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee-ece-eecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPI-TEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~l-T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
+.. .++ ..++.+++.|-+++ +++..+.++++. -.| |.++|... + .|.|..-.++-.+.-+|. .
T Consensus 257 lsl----sWc-----~~D~~lllSsgkD~--~ii~wN~~tgEvl~~~p~~~nW~fd-v-~w~pr~P~~~A~asfdgk--I 321 (1049)
T KOG0307|consen 257 LSL----SWC-----PQDPRLLLSSGKDN--RIICWNPNTGEVLGELPAQGNWCFD-V-QWCPRNPSVMAAASFDGK--I 321 (1049)
T ss_pred eee----ccC-----CCCchhhhcccCCC--CeeEecCCCceEeeecCCCCcceee-e-eecCCCcchhhhheeccc--e
Confidence 110 111 02234666665655 456666666552 223 45666443 2 377776666666666665 6
Q ss_pred EEEEEE
Q 008274 236 HLYCAK 241 (571)
Q Consensus 236 ~l~~~~ 241 (571)
.||.+.
T Consensus 322 ~I~sl~ 327 (1049)
T KOG0307|consen 322 SIYSLQ 327 (1049)
T ss_pred eeeeee
Confidence 777654
Done!