Your job contains 1 sequence.
>008275
MACLQLQQLSLRISVPKTIKNSFVKLLDVFVDQMFEFVDQPLLPSQRNFAPVDALREAVL
VTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETD
GSWNVVYMNRHVESETFKQEKQRNRSSFLPAIEGDSLAILSAYLLNLLRFGKINKYISNT
NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAWNRPFTSHPKKASGTGELVIMGV
DATKPFVEIGVISADGDKLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLSIDLTRLAFG
GPLIKYEHEGYAKIGIMPRYGDADSVKWFDVEPNCTFHIINCFEDGDEVIVWGCRALESI
IPGPDLGLNKFEWFSKKFRHAELADESVDTSPDDVPLFSRVYEWRLNMQNGDVKETNLSG
TKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELI
KVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEPVA
KITLSHRVPYGFHGAFMSIPVQTQKASRNES
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008275
(571 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087418 - symbol:CCD1 "carotenoid cleavage dio... 345 6.0e-52 2
TAIR|locus:2202492 - symbol:NCED5 "nine-cis-epoxycaroteno... 315 8.1e-39 2
TAIR|locus:2091652 - symbol:NCED3 "nine-cis-epoxycaroteno... 308 1.0e-35 2
TAIR|locus:2032085 - symbol:NCED9 "nine-cis-epoxycaroteno... 302 4.2e-33 2
TAIR|locus:2134796 - symbol:NCED4 "nine-cis-epoxycaroteno... 251 1.5e-32 2
TAIR|locus:2124489 - symbol:NCED2 "nine-cis-epoxycaroteno... 269 1.4e-30 2
TAIR|locus:2093751 - symbol:NCED6 "nine-cis-epoxycaroteno... 249 3.5e-28 2
UNIPROTKB|O06785 - symbol:MT0683 "Carotenoid cleavage oxy... 136 8.2e-22 4
ZFIN|ZDB-GENE-060421-7448 - symbol:bco2b "beta-carotene o... 215 3.3e-20 2
UNIPROTKB|Q53353 - symbol:Q53353 "Lignostilbene-alpha,bet... 214 2.6e-19 2
ASPGD|ASPL0000046682 - symbol:AN1643 species:162425 "Emer... 199 3.5e-19 2
ASPGD|ASPL0000067272 - symbol:AN7062 species:162425 "Emer... 253 1.6e-18 1
UNIPROTKB|Q746V1 - symbol:GSU3417 "Dioxygenase, putative"... 139 4.5e-15 2
TIGR_CMR|GSU_3417 - symbol:GSU_3417 "dioxygenase, putativ... 139 4.5e-15 2
ZFIN|ZDB-GENE-010508-1 - symbol:bcmo1a "beta-carotene 15,... 134 1.8e-13 2
UNIPROTKB|E1C8E0 - symbol:BCO2 "Uncharacterized protein" ... 149 8.0e-12 2
UNIPROTKB|E2RS36 - symbol:BCO2 "Uncharacterized protein" ... 141 1.0e-11 2
UNIPROTKB|Q52008 - symbol:lsdB "Lignostilbene-alpha,beta-... 189 1.5e-11 1
UNIPROTKB|Q7XU29 - symbol:OSJNBb0034G17.9 "OSJNBb0034G17.... 143 2.4e-11 2
UNIPROTKB|F1SM94 - symbol:BCO2 "Uncharacterized protein" ... 140 4.4e-11 2
UNIPROTKB|Q83CU2 - symbol:CBU_1011 "Lignostilbene-alpha,b... 125 8.9e-11 2
TIGR_CMR|CBU_1011 - symbol:CBU_1011 "dioxygenase, putativ... 125 8.9e-11 2
UNIPROTKB|Q2KEQ1 - symbol:MGCH7_ch7g985 "Putative unchara... 165 6.4e-09 1
ZFIN|ZDB-GENE-040426-1191 - symbol:bcmo1b "beta-carotene ... 128 6.6e-09 3
ZFIN|ZDB-GENE-010509-1 - symbol:bco2l "beta-carotene 15, ... 129 6.6e-09 2
MGI|MGI:1926923 - symbol:Bcmo1 "beta-carotene 15,15'-mono... 116 6.7e-09 2
UNIPROTKB|E9PJJ1 - symbol:BCO2 "Beta,beta-carotene 9',10'... 114 8.6e-09 2
UNIPROTKB|Q9BYV7 - symbol:BCO2 "Beta,beta-carotene 9',10'... 114 1.5e-08 2
RGD|70981 - symbol:Bcmo1 "beta-carotene 15,15'-monooxygen... 107 1.6e-08 3
UNIPROTKB|Q91XT5 - symbol:Bcmo1 "Beta,beta-carotene 15,15... 107 1.6e-08 3
UNIPROTKB|F1N2Z9 - symbol:BCO2 "Uncharacterized protein" ... 160 6.4e-08 2
UNIPROTKB|Q8HXG8 - symbol:BCO2 "Beta,beta-carotene 9',10'... 109 9.5e-08 2
UNIPROTKB|Q9HAY6 - symbol:BCMO1 "Beta,beta-carotene 15,15... 96 1.7e-07 3
TAIR|locus:2134093 - symbol:CCD8 "carotenoid cleavage dio... 108 2.6e-07 2
MGI|MGI:2177469 - symbol:Bco2 "beta-carotene oxygenase 2"... 100 3.9e-07 2
UNIPROTKB|Q9I993 - symbol:BCMO1 "Beta,beta-carotene 15,15... 149 4.1e-07 1
WB|WBGene00018755 - symbol:bcmo-2 species:6239 "Caenorhab... 106 1.5e-06 2
RGD|621396 - symbol:Rpe65 "retinal pigment epithelium 65"... 124 1.5e-06 2
FB|FBgn0002937 - symbol:ninaB "neither inactivation nor a... 137 1.5e-06 2
MGI|MGI:98001 - symbol:Rpe65 "retinal pigment epithelium ... 120 4.1e-06 2
WB|WBGene00012914 - symbol:bcmo-1 species:6239 "Caenorhab... 112 4.4e-06 2
UNIPROTKB|F1S830 - symbol:RPE65 "Uncharacterized protein"... 120 5.1e-06 2
UNIPROTKB|Q28175 - symbol:RPE65 "Retinoid isomerohydrolas... 119 6.6e-06 2
UNIPROTKB|Q16518 - symbol:RPE65 "Retinoid isomerohydrolas... 118 8.5e-06 2
UNIPROTKB|Q9YGX2 - symbol:RPE65 "Retinoid isomerohydrolas... 113 8.9e-06 3
UNIPROTKB|F1PXT9 - symbol:RPE65 "Retinoid isomerohydrolas... 116 1.4e-05 2
UNIPROTKB|Q9TVB8 - symbol:RPE65 "Retinoid isomerohydrolas... 116 1.4e-05 2
ZFIN|ZDB-GENE-040426-1717 - symbol:rpe65a "retinal pigmen... 115 3.3e-05 3
UNIPROTKB|F1N3B7 - symbol:BCMO1 "Uncharacterized protein"... 89 0.00016 3
ZFIN|ZDB-GENE-050410-16 - symbol:rpe65b "retinal pigment ... 90 0.00036 4
UNIPROTKB|F1P321 - symbol:RPE65 "Retinoid isomerohydrolas... 93 0.00063 3
UNIPROTKB|F1NE28 - symbol:RPE65 "Retinoid isomerohydrolas... 93 0.00068 3
>TAIR|locus:2087418 [details] [associations]
symbol:CCD1 "carotenoid cleavage dioxygenase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016121 "carotene catabolic process" evidence=IMP] [GO:0016124
"xanthophyll catabolic process" evidence=IMP] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0044242 "cellular
lipid catabolic process" evidence=RCA] GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0046872 EMBL:AL163818 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121
EMBL:AJ005813 EMBL:BT000436 EMBL:BT002102 IPI:IPI00517969
PIR:T49193 PIR:T51734 RefSeq:NP_191911.1 UniGene:At.22615
UniGene:At.43820 ProteinModelPortal:O65572 SMR:O65572 STRING:O65572
PaxDb:O65572 PRIDE:O65572 EnsemblPlants:AT3G63520.1 GeneID:825527
KEGG:ath:AT3G63520 TAIR:At3g63520 HOGENOM:HOG000254836
InParanoid:O65572 KO:K11159 OMA:GVMMHDF PhylomeDB:O65572
ProtClustDB:PLN02491 Genevestigator:O65572 GO:GO:0045549
GO:GO:0016124 Uniprot:O65572
Length = 538
Score = 345 (126.5 bits), Expect = 6.0e-52, Sum P(2) = 6.0e-52
Identities = 112/374 (29%), Positives = 177/374 (47%)
Query: 13 ISV-PKTIKNSFVKLLDVF---VDQMFEFVDQPLLPSQRNFAPVDALREAVLVTNIDGEI 68
ISV P+ K KLLD+ V ++ PL NFAP+ V + G +
Sbjct: 12 ISVHPRPSKGFSSKLLDLLERLVVKLMHDASLPLHYLSGNFAPIRDETPPVKDLPVHGFL 71
Query: 69 PEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSWNVVYM 128
PE G ++R GPNP F + + + W +G+GM+H + K DG Y+
Sbjct: 72 PECL-NGEFVRVGPNPKFDAV---------AGYHWFDGDGMIHGVRIK---DGK--ATYV 116
Query: 129 NRHVESETFKQEKQRNRSSFLPA--IEGDXXXXXXXXXXXXXRFGKI--NKY---ISNTN 181
+R+V++ KQE+ + F+ ++G + KI N Y +NT
Sbjct: 117 SRYVKTSRLKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKL-KILDNTYGNGTANTA 175
Query: 182 IFEHAGKFYSVAENHMPQEIDIFT---LETLGNWDVNGAWNRPFTSHPKKASGTGELVIM 238
+ H GK ++ E P I + L+TLG D + FT+HPK TGE+
Sbjct: 176 LVYHHGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLTHSFTAHPKVDPVTGEMFTF 235
Query: 239 GVDATKPFVEIGVISADGDKLVHK-VDLKLSRCSLCHEIGITQRYNVFLDYPLSIDLTRL 297
G T P++ VIS DG ++H V + +S + H+ IT+ Y +F+D P+ +
Sbjct: 236 GYSHTPPYLTYRVISKDG--IMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPKEM 293
Query: 298 AFGGPLI-KYEHEGYAKIGIMPRYG-DADSVKWFDVEPNC-TFHIINCFEDGDEVIVWGC 354
+I ++ A+ G++PRY D ++WF++ PNC FH N +E+ DEV++ C
Sbjct: 294 VKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWFEL-PNCFIFHNANAWEEEDEVVLITC 352
Query: 355 RALESIIPGPDLGL 368
R LE+ PDL +
Sbjct: 353 R-LEN----PDLDM 361
Score = 254 (94.5 bits), Expect = 6.0e-52, Sum P(2) = 6.0e-52
Identities = 64/160 (40%), Positives = 90/160 (56%)
Query: 399 SRVYEWRLNMQNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMP 458
+ +YE R NM+ G + LS + V DFP IN YTG K +Y Y I+DSIA +G+
Sbjct: 375 NELYEMRFNMKTGSASQKKLSASAV--DFPRINECYTGKKQRYVYGTILDSIAK-VTGII 431
Query: 459 KYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHN 518
K+ A+ + E IK Y E + + +VP+ EEDDG++I F+H+
Sbjct: 432 KFDLHAEAETGKR-MLEVGGNIKGIYD-LGEGRYGSEAIYVPR-ETAEEDDGYLIFFVHD 488
Query: 519 EDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFMS 558
E+T S V +ID K + EPVA + L HRVPYGFH F++
Sbjct: 489 ENTGKSCVTVIDAKTMSAEPVAVVELPHRVPYGFHALFVT 528
>TAIR|locus:2202492 [details] [associations]
symbol:NCED5 "nine-cis-epoxycarotenoid dioxygenase 5"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009688
"abscisic acid biosynthetic process" evidence=IMP;TAS] [GO:0045549
"9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010162 "seed dormancy process" evidence=IGI] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0009414 GO:GO:0009688
GO:GO:0009579 GO:GO:0009535 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162 HOGENOM:HOG000254836
GO:GO:0045549 KO:K09840 EMBL:AC074176 ProtClustDB:PLN02258
EMBL:AK226774 IPI:IPI00530821 PIR:A86425 RefSeq:NP_174302.1
UniGene:At.51834 ProteinModelPortal:Q9C6Z1 SMR:Q9C6Z1 IntAct:Q9C6Z1
STRING:Q9C6Z1 EnsemblPlants:AT1G30100.1 GeneID:839889
KEGG:ath:AT1G30100 TAIR:At1g30100 InParanoid:Q9C6Z1 OMA:PTYVLHF
PhylomeDB:Q9C6Z1 Genevestigator:Q9C6Z1 Uniprot:Q9C6Z1
Length = 589
Score = 315 (115.9 bits), Expect = 8.1e-39, Sum P(2) = 8.1e-39
Identities = 100/338 (29%), Positives = 164/338 (48%)
Query: 48 NFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGE 107
N+APV + ++DG+IP D +GVY+RNG NPLF + S +H++ +G+
Sbjct: 116 NYAPVPE-QSVKSSLSVDGKIP-DCIDGVYLRNGANPLFEPV--------SGHHLF-DGD 164
Query: 108 GMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAI---EGDXXXXXXXXX 164
GM+HA+ K T+G + Y R E+E QEKQ F AI G
Sbjct: 165 GMVHAV---KITNG--DASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLF 219
Query: 165 XXXXRFGKINKY----ISNTNIFEHAGKFYSVAENHMPQEI---DIFTLETLGNWDVNGA 217
FG +N ++N + + +++E+ +P ++ D LET+G +D +G
Sbjct: 220 YARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQ 279
Query: 218 WNRPFTSHPKKASGTGELVIMGVDATK-PFVEIGVISADGDKLVHKVDLKLSRCSLCHEI 276
+ +HPK T EL + D K P+++ S +G+K V++ L+ ++ H+
Sbjct: 280 LSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPD-VEIPLASPTMMHDF 338
Query: 277 GITQRYNVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIGIMPRYG-DADSVKWFDVEPNC 335
IT+ + V D + L+ + G +KY+ E ++ GI+PR DA + W +
Sbjct: 339 AITENFVVIPDQQVVFKLSDMFLGKSPVKYDGEKISRFGILPRNAKDASEMVWVESPETF 398
Query: 336 TFHIINCFE--DGDEVIVWG-CRA-LESIIPGPDLGLN 369
FH+ N +E + DEV+V G C +SI D LN
Sbjct: 399 CFHLWNAWESPETDEVVVIGSCMTPADSIFNECDEQLN 436
Score = 169 (64.5 bits), Expect = 8.1e-39, Sum P(2) = 8.1e-39
Identities = 53/168 (31%), Positives = 89/168 (52%)
Query: 394 DVPLFSRVYEWRLNMQNG-DVKETNLSGT-KVSMDFPMINGGYTGIKNKYGYTQIVDSIA 451
D L S + E RLN++ G + T + G+ +++++ M+N G K +Y Y I
Sbjct: 432 DEQLNSVLSEIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAI----- 486
Query: 452 SSASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVE-EDDG 510
A PK G AK+ D + E V+ H + + F+P+G + EDDG
Sbjct: 487 --AEPWPKVSGFAKV-----DLSTGE----VKNHFYGGKKYGGEPFFLPRGLESDGEDDG 535
Query: 511 WIITFLHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFMS 558
+I++F+H+E++ S+++I++ T E A + L RVPYGFHG F++
Sbjct: 536 YIMSFVHDEESWESELHIVNA--VTLELEATVKLPSRVPYGFHGTFVN 581
>TAIR|locus:2091652 [details] [associations]
symbol:NCED3 "nine-cis-epoxycarotenoid dioxygenase 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA;IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009414 GO:GO:0009688 GO:GO:0009535 GO:GO:0042538
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 OMA:HTLNAYD
EMBL:AB028617 ProtClustDB:PLN02258 EMBL:AB026549 EMBL:AY056255
IPI:IPI00528622 RefSeq:NP_188062.1 UniGene:At.26346
ProteinModelPortal:Q9LRR7 SMR:Q9LRR7 STRING:Q9LRR7 PaxDb:Q9LRR7
EnsemblPlants:AT3G14440.1 GeneID:820667 KEGG:ath:AT3G14440
TAIR:At3g14440 InParanoid:Q9LRR7 PhylomeDB:Q9LRR7
BioCyc:ARA:AT3G14440-MONOMER BioCyc:MetaCyc:AT3G14440-MONOMER
Genevestigator:Q9LRR7 Uniprot:Q9LRR7
Length = 599
Score = 308 (113.5 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 92/323 (28%), Positives = 160/323 (49%)
Query: 48 NFAPVDALREAVLVTNID--GEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVE 105
NFAPV+ E + N+ G++P+ +GVY+RNG NPL + + H + +
Sbjct: 126 NFAPVN---EQPVRRNLPVVGKLPDSI-KGVYVRNGANPLHEPV---------TGHHFFD 172
Query: 106 GEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAI---EGDXXXXXXX 162
G+GM+HA+ F+ GS + Y R ++ F QE+Q R F AI G
Sbjct: 173 GDGMVHAVKFEH---GSAS--YACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLM 227
Query: 163 XXXXXXRFGKINKY----ISNTNIFEHAGKFYSVAENHMPQEIDIFT---LETLGNWDVN 215
G ++ ++N + G+ +++E+ +P ++ I L+T+G +D +
Sbjct: 228 LFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFD 287
Query: 216 GAWNRPFTSHPKKASGTGELVIMGVDA-TKPFVEIGVISADGDKLVHKVDLKLSRCSLCH 274
G +HPK +GEL + D +KP+++ S DG K V+++L + ++ H
Sbjct: 288 GQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPD-VEIQLDQPTMMH 346
Query: 275 EIGITQRYNVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIGIMPRYG-DADSVKWFDVEP 333
+ IT+ + V D + L + GG + Y+ A+ GI+ +Y D+ ++KW D P
Sbjct: 347 DFAITENFVVVPDQQVVFKLPEMIRGGSPVVYDKNKVARFGILDKYAEDSSNIKWIDA-P 405
Query: 334 NC-TFHIINCFEDG--DEVIVWG 353
+C FH+ N +E+ DEV+V G
Sbjct: 406 DCFCFHLWNAWEEPETDEVVVIG 428
Score = 148 (57.2 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 53/166 (31%), Positives = 80/166 (48%)
Query: 394 DVPLFSRVYEWRLNMQNGDVKETNLSGTKVSMDFPMIN--GGYTGIKNKYGYTQIVDSIA 451
D L S + E RLN++ G+ + +S + +N G +N G +A
Sbjct: 442 DENLKSVLSEIRLNLKTGESTRRPI----ISNEDQQVNLEAGMVN-RNMLGRKTKFAYLA 496
Query: 452 SSASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGW 511
A PK G AK+ D T E V+ H + +N + F+P G G EED+G+
Sbjct: 497 L-AEPWPKVSGFAKV-----DLTTGE----VKKHLYGDNRYGGEPLFLP-GEGGEEDEGY 545
Query: 512 IITFLHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFM 557
I+ F+H+E T S++ I++ E A + L RVPYGFHG F+
Sbjct: 546 ILCFVHDEKTWKSELQIVNAVSLEVE--ATVKLPSRVPYGFHGTFI 589
Score = 48 (22.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 112 ALYFKKETDGSWNVVYMNRHVESETFKQEK--QRNRSSFLPAIEG 154
AL+F K++ S +V + ES T KQ QR ++ L A EG
Sbjct: 59 ALHFPKQSSNSPAIVVKPKAKESNT-KQMNLFQRAAAAALDAAEG 102
>TAIR|locus:2032085 [details] [associations]
symbol:NCED9 "nine-cis-epoxycarotenoid dioxygenase 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0010162 "seed dormancy process"
evidence=IGI;RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013430
GO:GO:0009570 GO:GO:0046872 GO:GO:0009688 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 ProtClustDB:PLN02258
IPI:IPI00528094 PIR:E96812 RefSeq:NP_177960.1 UniGene:At.34302
ProteinModelPortal:Q9M9F5 SMR:Q9M9F5 STRING:Q9M9F5 PaxDb:Q9M9F5
PRIDE:Q9M9F5 EnsemblPlants:AT1G78390.1 GeneID:844175
KEGG:ath:AT1G78390 TAIR:At1g78390 InParanoid:Q9M9F5 OMA:WMAVAER
PhylomeDB:Q9M9F5 BioCyc:MetaCyc:AT1G78390-MONOMER
Genevestigator:Q9M9F5 Uniprot:Q9M9F5
Length = 657
Score = 302 (111.4 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 124/469 (26%), Positives = 207/469 (44%)
Query: 41 PLLPSQRNFAPVDALREAVLVTN--IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGS 98
P + NF PV E +V N + G +PE +GVY+RNG NPL K + G
Sbjct: 179 PAVQIAGNFFPVP---EKPVVHNLPVTGTVPECI-QGVYVRNGANPLH------KPVSG- 227
Query: 99 SNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAI---EGD 155
+H++ +G+GM+HA+ F +GS V Y R E+ QE++ R F AI G
Sbjct: 228 -HHLF-DGDGMVHAVRFD---NGS--VSYACRFTETNRLVQERECGRPVFPKAIGELHGH 280
Query: 156 XXXXXXXXXXXXXRFGKINKY----ISNTNIFEHAGKFYSVAENHMPQEIDIFT---LET 208
FG ++ ++N + G +++E+ +P + + LET
Sbjct: 281 LGIAKLMLFNTRGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPYHVKVTQTGDLET 340
Query: 209 LGNWDVNGAWNRPFTSHPKKASGTGELVIMGVDA-TKPFVEIGVISADGDKLVHKVDLKL 267
G +D +G +HPK T EL + D +KP+++ ++DG+K V++ L
Sbjct: 341 SGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPD-VEIPL 399
Query: 268 SRCSLCHEIGITQRYNVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIGIMPRYG-DADSV 326
+ ++ H+ IT+ + V D + L + GG + Y+ + ++ GI+ + DA S+
Sbjct: 400 DQPTMIHDFAITENFVVIPDQQVVFRLPEMIRGGSPVVYDEKKKSRFGILNKNAKDASSI 459
Query: 327 KWFDVEPNC-TFHIINCFEDG--DEVIVWGCRALESIIPGPDLGLNKF-EWFSKKFRHAE 382
+W +V P+C FH+ N +E+ DEV+V G S + PD N+ E
Sbjct: 460 QWIEV-PDCFCFHLWNSWEEPETDEVVVIG-----SCMTPPDSIFNEHDETLQSVLSEIR 513
Query: 383 LADESVDTSPDDVPLFSRVYEWRLNMQNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYG 442
L ++ +++ P+ S ++N++ G V NL G K + + + +
Sbjct: 514 LNLKTGESTRR--PVISE----QVNLEAGMVNR-NLLGRKTRYAYLALTEPWPKVSGFAK 566
Query: 443 YTQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENI 491
I G KYGG L D E I V H EE +
Sbjct: 567 VDLSTGEIRKYIYGEGKYGG-EPLFLPSGDGEEDGGYIMVFVHD-EEKV 613
Score = 132 (51.5 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFM 557
F+P G G EED G+I+ F+H+E+ S++ +I+ E A +TL RVPYGFHG F+
Sbjct: 590 FLPSGDG-EEDGGYIMVFVHDEEKVKSELQLINAVNMKLE--ATVTLPSRVPYGFHGTFI 646
Query: 558 S 558
S
Sbjct: 647 S 647
Score = 71 (30.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/114 (25%), Positives = 48/114 (42%)
Query: 394 DVPLFSRVYEWRLNMQNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASS 453
D L S + E RLN++ G+ + +V+++ M+N G K +Y Y + +
Sbjct: 502 DETLQSVLSEIRLNLKTGESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEP---- 557
Query: 454 ASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEE 507
PK G AK+ + E+ K Y E + F+P G G E+
Sbjct: 558 ---WPKVSGFAKVDLS------TGEIRKYIYG---EGKYGGEPLFLPSGDGEED 599
>TAIR|locus:2134796 [details] [associations]
symbol:NCED4 "nine-cis-epoxycarotenoid dioxygenase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
EMBL:AL021687 EMBL:AL161550 GO:GO:0016702 GO:GO:0010287
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 EMBL:AY136353 EMBL:BT008785 EMBL:AY056789
EMBL:AK227175 IPI:IPI00536835 PIR:T04438 RefSeq:NP_193652.1
UniGene:At.1927 UniGene:At.67316 ProteinModelPortal:O49675
SMR:O49675 IntAct:O49675 STRING:O49675 PaxDb:O49675 PRIDE:O49675
EnsemblPlants:AT4G19170.1 GeneID:827655 KEGG:ath:AT4G19170
TAIR:At4g19170 InParanoid:O49675 KO:K09840 OMA:HGAWVPR
PhylomeDB:O49675 ProtClustDB:CLSN2685496 Genevestigator:O49675
Uniprot:O49675
Length = 595
Score = 251 (93.4 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 88/340 (25%), Positives = 147/340 (43%)
Query: 32 DQMFEFVDQPLLPS-------QRNFAPV-DALREAVLVTNIDGEIPEDFPEGVYIRNGPN 83
D + F+D P PS NFAPV D L I G +P G YIRNGPN
Sbjct: 91 DVINTFIDPPSRPSVDPKHVLSDNFAPVLDELPPTDCEI-IHGTLPLSL-NGAYIRNGPN 148
Query: 84 PLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFK--KETDGSWNVVYMNRHVESETFKQEK 141
P F + + H++ +G+GMLHA+ K T S V +VE +T
Sbjct: 149 PQF----LPRGPY----HLF-DGDGMLHAIKIHNGKATLCSRYVKTYKYNVEKQTGAPVM 199
Query: 142 QRNRSSFLPAIEGDXXXXXXXXXXXXXRFGKINKY-ISNTNIFEHAGKFYSVAENHMPQE 200
S F ++ +N ++NT++ + + +++ E+ +P
Sbjct: 200 PNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYA 259
Query: 201 IDIFT---LETLGNWDVNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGD 257
+ + +ET+G +D +G T+HPK TGE PF+ + G
Sbjct: 260 VRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPVPPFLTYFRFDSAGK 319
Query: 258 KLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLSIDLTRLAF---GGPLIKYEHEGYAKI 314
K ++ S H+ IT+R+ +F + L + + L GG + ++ ++
Sbjct: 320 KQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRL 379
Query: 315 GIMPRY-GDADSVKWFDVEPNCTFHIINCFE--DGDEVIV 351
G++P+Y GD +KWF+V H IN ++ DG+ V++
Sbjct: 380 GVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVL 419
Score = 181 (68.8 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 51/158 (32%), Positives = 79/158 (50%)
Query: 405 RLNMQNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLA 464
++++ G V+ +S ++DF +IN + G ++Y Y I D MPK G+
Sbjct: 445 KIDLVTGIVRRHPISAR--NLDFAVINPAFLGRCSRYVYAAIGDP-------MPKISGVV 495
Query: 465 KLSFEEPDNTESEELIKVEYHKFEENIFCTGGA--FVPKGRG---VEEDDGWIITFLHNE 519
KL + D + V + C GG FV + G EEDDG+++T++H+E
Sbjct: 496 KLDVSKGDRDDCT----VARRMYGSG--CYGGEPFFVARDPGNPEAEEDDGYVVTYVHDE 549
Query: 520 DTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFM 557
T S+ ++D K E VA + L RVPYGFHG F+
Sbjct: 550 VTGESKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFV 587
>TAIR|locus:2124489 [details] [associations]
symbol:NCED2 "nine-cis-epoxycarotenoid dioxygenase 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009688 GO:GO:0009535 EMBL:AL161548
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AL021710
EMBL:BT030365 IPI:IPI00523545 PIR:T04531 RefSeq:NP_193569.1
UniGene:At.32916 ProteinModelPortal:O49505 SMR:O49505 STRING:O49505
EnsemblPlants:AT4G18350.1 GeneID:827562 KEGG:ath:AT4G18350
TAIR:At4g18350 InParanoid:O49505 OMA:MNAWEDG PhylomeDB:O49505
ProtClustDB:PLN02258 BioCyc:MetaCyc:AT4G18350-MONOMER
Genevestigator:O49505 Uniprot:O49505
Length = 583
Score = 269 (99.8 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 92/337 (27%), Positives = 162/337 (48%)
Query: 48 NFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGE 107
N++PV +T ++G IP D +GVYIRNG NP+F + T + +H++ +G+
Sbjct: 109 NYSPVPESSVRRNLT-VEGTIP-DCIDGVYIRNGANPMF---EPT-----AGHHLF-DGD 157
Query: 108 GMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAI---EGDXXXXXXXXX 164
GM+HA+ K T+GS + Y R ++E QEK+ R F AI G
Sbjct: 158 GMVHAV---KITNGSAS--YACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLF 212
Query: 165 XXXXRFGKINKY----ISNTNIFEHAGKFYSVAENHMPQEIDIFT---LETLGNWDVNGA 217
G IN ++N + + +++E+ +P ++ I L+T+G +D +G
Sbjct: 213 YARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPYQLKITQTGDLQTVGRYDFDGQ 272
Query: 218 WNRPFTSHPKKASGTGELVIMGVDATK-PFVEIGVISADGDKLVHKVDLKLSRCSLCHEI 276
+HPK T EL + D K P+++ S DG K ++++ L ++ H+
Sbjct: 273 LKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSP-ELEIPLETPTMIHDF 331
Query: 277 GITQRYNVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIGIMPRYG-DADSVKWFDVEPNC 335
IT+ + V D + L + G + ++ E +++GIMP+ +A + W +
Sbjct: 332 AITENFVVIPDQQVVFKLGEMISGKSPVVFDGEKVSRLGIMPKDATEASQIIWVNSPETF 391
Query: 336 TFHIINCFE--DGDEVIVWG-CRA-LESIIPGPDLGL 368
FH+ N +E + +E++V G C + +SI D L
Sbjct: 392 CFHLWNAWESPETEEIVVIGSCMSPADSIFNERDESL 428
Score = 142 (55.0 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 53/169 (31%), Positives = 79/169 (46%)
Query: 394 DVPLFSRVYEWRLNMQNGDV-KETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIAS 452
D L S + E R+N++ + + L V+++ M+N G K ++ + I
Sbjct: 425 DESLRSVLSEIRINLRTRKTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLAI------ 478
Query: 453 SASGMPKYGGLAKLSFEEPDNTESEELIKVEY--HKFE-ENIFCTGGAFVPKGRGVE-ED 508
A PK G AK+ + E+ K Y K+ E F G + G G E ED
Sbjct: 479 -AYPWPKVSGFAKVDLC------TGEMKKYIYGGEKYGGEPFFLPGNS----GNGEENED 527
Query: 509 DGWIITFLHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFM 557
DG+I +H+E+T S++ II+ E A I L RVPYGFHG F+
Sbjct: 528 DGYIFCHVHDEETKTSELQIINAVNLKLE--ATIKLPSRVPYGFHGTFV 574
>TAIR|locus:2093751 [details] [associations]
symbol:NCED6 "nine-cis-epoxycarotenoid dioxygenase 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0009639 "response to red or far red light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0010114 GO:GO:0009688 GO:GO:0009535 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AB028621
ProtClustDB:PLN02258 IPI:IPI00526624 RefSeq:NP_189064.1
UniGene:At.37572 ProteinModelPortal:Q9LRM7 SMR:Q9LRM7 STRING:Q9LRM7
PaxDb:Q9LRM7 EnsemblPlants:AT3G24220.1 GeneID:822008
KEGG:ath:AT3G24220 TAIR:At3g24220 InParanoid:Q9LRM7 OMA:AWEERTE
PhylomeDB:Q9LRM7 BioCyc:MetaCyc:AT3G24220-MONOMER
Genevestigator:Q9LRM7 Uniprot:Q9LRM7
Length = 577
Score = 249 (92.7 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 85/330 (25%), Positives = 151/330 (45%)
Query: 41 PLLPSQRNFAPVDALREAVLVTNID--GEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGS 98
P + NFAPV+ E + ++ G+IP +GVYIRNG NP+F L +
Sbjct: 97 PAVQLSGNFAPVN---ECPVQNGLEVVGQIPSCL-KGVYIRNGANPMFPPL--------A 144
Query: 99 SNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSF---LPAIEGD 155
+H++ +G+GM+HA+ + V Y R+ ++ QE RS F + + G
Sbjct: 145 GHHLF-DGDGMIHAVSIGFDNQ----VSYSCRYTKTNRLVQETALGRSVFPKPIGELHGH 199
Query: 156 XXXXXXXXXXXXXRFGKINKY----ISNTNIFEHAGKFYSVAENHMPQEIDIF---TLET 208
G ++ ++N + G+ +++E+ +P ++ I LET
Sbjct: 200 SGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLET 259
Query: 209 LGNWDVNGAWNRPFTSHPKKASGTGELVIMGVDATK-PFVEIGVISADGDKLVHKVDLKL 267
+G + + + +HPK + TG+L + + K P + + G K V++ L
Sbjct: 260 IGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKK-TRDVEITL 318
Query: 268 SRCSLCHEIGITQRYNVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIGIMPRYGDADS-V 326
++ H+ IT+ + V D + L+ + GG + Y E A+ G++ + S +
Sbjct: 319 PEPTMIHDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKEKMARFGVLSKQDLTGSDI 378
Query: 327 KWFDVEPNC-TFHIINCFED----GDEVIV 351
W DV P+C FH+ N +E+ GD VIV
Sbjct: 379 NWVDV-PDCFCFHLWNAWEERTEEGDPVIV 407
Score = 141 (54.7 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 38/106 (35%), Positives = 58/106 (54%)
Query: 454 ASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWII 513
A PK G+AK+ + + T SE + + F FVP+G G EED G+++
Sbjct: 476 ADPWPKCSGIAKVDIQ--NGTVSE-------FNYGPSRFGGEPCFVPEGEG-EEDKGYVM 525
Query: 514 TFLHNEDTNISQVYIIDTKKFTD-EPVAKITLSHRVPYGFHGAFMS 558
F+ +E+ + S+ ++D TD + VA + L RVPYGFHG F+S
Sbjct: 526 GFVRDEEKDESEFVVVDA---TDMKQVAAVRLPERVPYGFHGTFVS 568
Score = 75 (31.5 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 403 EWRLNMQNGDVKETN--LSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKY 460
E RLNM+ KE+N + T V+++ IN Y G K+++ Y I D PK
Sbjct: 433 EIRLNMRT---KESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADP-------WPKC 482
Query: 461 GGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEE 507
G+AK+ + + T SE + + F FVP+G G E+
Sbjct: 483 SGIAKVDIQ--NGTVSE-------FNYGPSRFGGEPCFVPEGEGEED 520
>UNIPROTKB|O06785 [details] [associations]
symbol:MT0683 "Carotenoid cleavage oxygenase" species:1773
"Mycobacterium tuberculosis" [GO:0010436 "carotenoid dioxygenase
activity" evidence=IDA] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 EMBL:BX842574
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010436
PIR:A70534 RefSeq:NP_215168.1 RefSeq:NP_335094.1
RefSeq:YP_006513995.1 ProteinModelPortal:O06785 SMR:O06785
PRIDE:O06785 EnsemblBacteria:EBMYCT00000002162
EnsemblBacteria:EBMYCT00000072242 GeneID:13318540 GeneID:888089
GeneID:925966 KEGG:mtc:MT0683 KEGG:mtu:Rv0654 KEGG:mtv:RVBD_0654
PATRIC:18123223 TubercuList:Rv0654 HOGENOM:HOG000254835 OMA:HTLNAYD
ProtClustDB:CLSK790657 GO:GO:0016118 Uniprot:O06785
Length = 501
Score = 136 (52.9 bits), Expect = 8.2e-22, Sum P(4) = 8.2e-22
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 179 NTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAWNRPFTSHPKKASGTGELVIM 238
NTN+ HAG+ ++ E + L+T+G D +G + +T+HP++ TGEL +
Sbjct: 116 NTNVLTHAGRTLALVEAGVVNYELTDELDTVGPCDFDGTLHGGYTAHPQRDPHTGELHAV 175
Query: 239 GVDATKPF-VEIGVISADGDKLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLSID 293
+ V+ VI DG VD++++ + H +T Y V D P++ D
Sbjct: 176 SYSFARGHRVQYSVIGTDGHAR-RTVDIEVAGSPMMHSFSLTDNYVVIYDLPVTFD 230
Score = 104 (41.7 bits), Expect = 8.2e-22, Sum P(4) = 8.2e-22
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 312 AKIGIMPRYGDADSVKWFDVEPNCTFHIINCFED---GDEVIV 351
A++G+MPR G + V+WFD+EP +H +N + + G EV+V
Sbjct: 288 ARVGVMPREGGNEDVRWFDIEPCYVYHPLNAYSECRNGAEVLV 330
Score = 98 (39.6 bits), Expect = 8.2e-22, Sum P(4) = 8.2e-22
Identities = 36/151 (23%), Positives = 66/151 (43%)
Query: 404 WRLNMQNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGL 463
W +N+ G V T + +FP IN G +++ YT ++ +G L
Sbjct: 358 WTINLATGAV--TAECRDDRAQEFPRINETLVGGPHRFAYTVGIEGGFLVGAG----AAL 411
Query: 464 AKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNI 523
+ +++ T S + ++ ++ FVP EDDG ++ + + +
Sbjct: 412 STPLYKQDCVTGSSTVASLD-----PDLLIGEMVFVPNPSARAEDDGILMGYGWHRGRDE 466
Query: 524 SQVYIIDTKKFTDEPVAKITLSHRVPYGFHG 554
Q+ ++D + T E +A + L RVP GFHG
Sbjct: 467 GQLLLLDAQ--TLESIATVHLPQRVPMGFHG 495
Score = 78 (32.5 bits), Expect = 8.2e-22, Sum P(4) = 8.2e-22
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSW 123
+ G IPE +G Y+RNGPNP+ + + + W G+ M+H + + + W
Sbjct: 32 VTGRIPEHL-DGRYLRNGPNPV--------AEVDPATYHWFTGDAMVHGVALR-DGKARW 81
Query: 124 NVVYMNRHVES 134
Y NR V +
Sbjct: 82 ---YRNRWVRT 89
>ZFIN|ZDB-GENE-060421-7448 [details] [associations]
symbol:bco2b "beta-carotene oxygenase 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060421-7448 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 KO:K10252 OrthoDB:EOG45B1FD EMBL:BX572648
EMBL:BC115259 IPI:IPI00758725 RefSeq:NP_001035402.1
UniGene:Dr.82050 Ensembl:ENSDART00000061139 GeneID:678554
KEGG:dre:678554 CTD:678554 InParanoid:Q1RLW1 OMA:LWHIGDY
NextBio:20902398 Uniprot:Q1RLW1
Length = 555
Score = 215 (80.7 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 93/342 (27%), Positives = 150/342 (43%)
Query: 37 FVDQPLLPS-QRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSM 95
F D LPS ++ D E + T I G +P + +G ++RNGP G + +S
Sbjct: 26 FTDVHGLPSIEKLICSADETPEPI-TTTITGNVPS-WIKGNFLRNGP----GKFEIGRSS 79
Query: 96 FGSSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAI 152
F NH W +G +LH + + DG V YM+R + S+++K+ + NR S F
Sbjct: 80 F---NH-WFDGMALLHQFHIE---DGK--VTYMSRFLNSDSYKENLEHNRIIVSEFGTVA 130
Query: 153 EGDXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLG-- 210
D K++ +N + ++ G +Y E + +ID TLET
Sbjct: 131 MPDPCKNFFQRFLSRFELPKLSDN-ANVSFVQYKGDYYVSTETNFMHKIDPETLETKEKV 189
Query: 211 NWD----VNGAWNRPF-----TSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVH 261
+W VNGA P T++ S T + + P E + +G +V
Sbjct: 190 DWSKFIAVNGATAHPHVDSDGTTYNMGNSYTVKGAFYNIIMVPPNKENPNDTLEGASVVC 249
Query: 262 KVDLK-LSRCSLCHEIGITQRYNVFLDYPLSIDLTRLAFGGPLIKYEHEG-Y--AKIG-- 315
+ + S+ S H +++ Y VF++ P+ +DL ++ G K +EG Y K
Sbjct: 250 SIPSEDKSKPSYYHSFAMSENYVVFIEQPIKMDLLKIVTGKLRGKGINEGVYWDPKRNTV 309
Query: 316 ---IMPRYGDADSVKWFDVEPNCTFHIINCFEDGDEVIVWGC 354
I R G VK++ +P TFH INC+ED +I+ C
Sbjct: 310 FHVINKRTGKLSLVKYY-TKPLSTFHQINCYEDNGFLIMDMC 350
Score = 101 (40.6 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 480 IKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFL--HNEDTNISQVYIIDTKKFTDE 537
IKV H +F + FV VEEDDG I++ + N+D + + + ++D K F E
Sbjct: 481 IKVWKHA---GMFPSEPVFVSSPGAVEEDDGVILSVVITPNQDKS-TFLLVLDAKTF--E 534
Query: 538 PVAKITLSHRVPYGFHGAFMS 558
+ + + +PYGFHG F S
Sbjct: 535 ELGRAEVPKNIPYGFHGTFQS 555
>UNIPROTKB|Q53353 [details] [associations]
symbol:Q53353 "Lignostilbene-alpha,beta-dioxygenase isozyme
I" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron ion
binding" evidence=IDA] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 EMBL:S65040 PIR:JN0595
ProteinModelPortal:Q53353 GO:GO:0050054 Uniprot:Q53353
Length = 485
Score = 214 (80.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 72/250 (28%), Positives = 116/250 (46%)
Query: 106 GEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAIEGDXXXXXXXXXX 165
G+GM+ F DG + + R+ +++ +K E++ +S F A
Sbjct: 61 GDGMVSLFRFH---DGK--IDFRQRYAQTDKWKVERKAGKSLF-GAYRNPLTDDASVQ-- 112
Query: 166 XXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAW-NRPFTS 224
G I + +NTN+ HAGK Y++ E+ +D TLET G + +G ++ F +
Sbjct: 113 -----GMI-RGTANTNVMVHAGKLYAMKEDSPCLIMDPLTLETEGYTNFDGKLQSQTFCA 166
Query: 225 HPKKASGTGELVIMGVDATKPFVEIGV----ISADGDKLVHKVDLKLSRCSLCHEIGITQ 280
HPK TG L A K + + + IS G KL+ ++ + + H+ G+T+
Sbjct: 167 HPKIDPVTGNLCAFAYGA-KGLMTLDMAYIEISPTG-KLLKEIPFQNPYYCMMHDFGVTE 224
Query: 281 RYNVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIGIMPRYGDADSVKWFDVEPNCTF-HI 339
Y VF PL RL P ++ +GI+PR GDA ++WF NC H+
Sbjct: 225 DYAVFAVMPLLSSWDRLEQRLPFFGFDTTLPCYLGILPRNGDARDLRWFKTG-NCFVGHV 283
Query: 340 INCFEDGDEV 349
+N F DG +V
Sbjct: 284 MNAFNDGTKV 293
Score = 91 (37.1 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 37/153 (24%), Positives = 60/153 (39%)
Query: 404 WRLNM-QNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIAS-SASGMPKYG 461
W ++M NGD E +FP I+ Y ++G+ I+D+ A G Y
Sbjct: 327 WTVDMASNGDSFEKTERLFDRPDEFPRIDERYATRAYRHGWMLILDTEKPYEAPGGAFYA 386
Query: 462 GLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDT 521
L + +S +E C F+P+ E DG++I + +
Sbjct: 387 LTNTLGHIDLATGKSSSWWAGPRCAIQEP--C----FIPRSPDAPEGDGYVIALVDDHVA 440
Query: 522 NISQVYIIDTKKFTDEPVAKITLSHRVPYGFHG 554
N S + I D + P+A+ L R+ G HG
Sbjct: 441 NYSDLAIFDAQHVDQGPIARAKLPVRIRQGLHG 473
>ASPGD|ASPL0000046682 [details] [associations]
symbol:AN1643 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
OMA:HGAWVPR HOGENOM:HOG000254835 OrthoDB:EOG4GTPN5
RefSeq:XP_659247.1 ProteinModelPortal:Q5BCT7
EnsemblFungi:CADANIAT00008281 GeneID:2875358 KEGG:ani:AN1643.2
Uniprot:Q5BCT7
Length = 480
Score = 199 (75.1 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 86/325 (26%), Positives = 136/325 (41%)
Query: 84 PLFGGLKSTKSMFGSSNHIWVEGE--GMLHALYFKKETDGSWNVVYMN--RHVESETFKQ 139
P F G G +H+ V GE + ++++ D + R+V++E F +
Sbjct: 12 PQFSGFMKPCRFEGDVSHLEVYGEIPKDIDGVFYRVMPDPQLPPFIEDDPRYVQTEKFVR 71
Query: 140 EKQRNRSSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQ 199
E++ R+ L A G R +NTN+ G+ ++ E+ P
Sbjct: 72 EREAQRA--LLAGLGKYRNRFTDAVELKVRS------TANTNVVFFNGQLLALKEDSPPY 123
Query: 200 EIDIFTLETLGNWDVNGAW-NRPFTSHPKKASGTGELVIMGVDAT---KPFVEIGVISAD 255
+D TL+T G +D G + FT+HPK TGE+V G +A P V +S
Sbjct: 124 ALDPVTLDTKGLYDFEGQLPSLTFTAHPKFDPATGEMVCFGYEARGDGTPDVCYYSVSPT 183
Query: 256 GDKLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIG 315
G K V L ++ H+ +T + +F P DL R+ GG ++ E +G
Sbjct: 184 G-KFTEVVWLVAPVVAMIHDFAVTDNWVIFPIIPQVCDLERMKQGGEHWQWSPETPFYLG 242
Query: 316 IMPRYG-DADSVKWFDVEPNCTFHIINCFED--GDEVIVWGCRALESIIPGPDLGLNKFE 372
+MPR G A+ VKWF + H N +E+ G VI G PD N E
Sbjct: 243 VMPRRGAKAEEVKWFRYMNSFPGHTANAYENEQGHLVIDLGLSEKNVFFWWPDAQGNAPE 302
Query: 373 WFSKKFRHAELADESVDTSPDDVPL 397
S ++L ++D +D+ L
Sbjct: 303 PSSIV---SQLVRFTIDPQTEDLTL 324
Score = 106 (42.4 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 456 GMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITF 515
G P Y LA L + + E H +E +F +P+ E DG ++
Sbjct: 375 GFPLYNSLAHL---DHTTGQVEVYFPGRTHLVQEPVF------IPRKNSSTEGDGHVLAL 425
Query: 516 LHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFM 557
++N DT S+++++DT+ F AKI L R+ G HG+++
Sbjct: 426 VNNYDTMASELHLLDTRDFA-RAQAKILLPVRLRQGLHGSWV 466
>ASPGD|ASPL0000067272 [details] [associations]
symbol:AN7062 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011047 SUPFAM:SSF50998 EMBL:BN001304
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 EMBL:AACD01000118 RefSeq:XP_664666.1
ProteinModelPortal:Q5AXB8 EnsemblFungi:CADANIAT00000409
GeneID:2869943 KEGG:ani:AN7062.2 OMA:FQEPIFV OrthoDB:EOG4GTPN5
Uniprot:Q5AXB8
Length = 555
Score = 253 (94.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 103/394 (26%), Positives = 161/394 (40%)
Query: 178 SNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAWNRP-FTSHPKKASGTGELV 236
+NTNIF G + E+ P +D +LET+G +D G P FT+HPK TGE+V
Sbjct: 144 ANTNIFFWRGMLLATKEDGPPYAMDPVSLETIGRYDFEGQVLSPTFTAHPKFDPKTGEMV 203
Query: 237 IMGVDA----TKPFVEIGV--ISADGDKLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPL 290
G +A +I V I A+G K + K C + H+ GI+ ++ V PL
Sbjct: 204 CYGYEAGGNGNDGSCDIVVYTIDANGVK-TEESWYKAPFCGIIHDCGISDKWVVLPMTPL 262
Query: 291 SIDLTRLAFGGPLIKYEHEGYAKIGIMPRYGDADS-VKWFDVEPNCTFHIINCFEDGDEV 349
D RL G ++ E G++PR G ++W+ + H ++C++ D
Sbjct: 263 KCDPERLKKGENHWAWDPEEDQWYGVVPRRGGKPGDIRWYRSKNAFQGHTVSCYDTPDGK 322
Query: 350 IVWGCRALESIIPGPDLGLNKFEWFSKKFRHAELADESVDTSPDDVPLFSRVYEWRLNMQ 409
+V+ +I G N F +F D T L ++ W + Q
Sbjct: 323 VVFDL----TIADG-----NVFFFFPP-------VDTPAGTVAKRNKLQNKTTRWIFDPQ 366
Query: 410 NGDVK---ETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIAS---SASGMPKYGGL 463
N E S +F I+ +T K + + ++D + G P G
Sbjct: 367 NTPTNSWVEPAEEFDTYSGEFSRIDDRFTTRKYNHYWQAVIDGTKPYDFAKCGSPAGGLF 426
Query: 464 AKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNI 523
L D E F+E AF+P+ EE DG+I+ L++ D
Sbjct: 427 NSLGHFTWDGAVRETFWAGPCATFQEP------AFIPRAGSTEEGDGYIVALLNHLDVLR 480
Query: 524 SQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAFM 557
+ V I D +K P+A I L ++ G HG F+
Sbjct: 481 NDVCIFDARKIAQGPIAVIHLPFKLRLGLHGNFV 514
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 80/297 (26%), Positives = 128/297 (43%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSW 123
I G+IP D +G + R P+ F ++ S H G+G + A+ T
Sbjct: 53 ITGQIPADI-DGTFFRVQPDHRF------PPIYESDIHF--NGDGNVTAIRITNST---- 99
Query: 124 NVVYMNRHVESETFKQEKQRNRSSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNTNIF 183
+ R+V ++ F+ E Q R+ F G G I + +NTNIF
Sbjct: 100 -AHFKQRYVRTDRFQAEGQAGRALF-----GKYRNPYTDNEAVK---GVI-RTAANTNIF 149
Query: 184 EHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAWNRP-FTSHPKKASGTGELVIMGVDA 242
G + E+ P +D +LET+G +D G P FT+HPK TGE+V G +A
Sbjct: 150 FWRGMLLATKEDGPPYAMDPVSLETIGRYDFEGQVLSPTFTAHPKFDPKTGEMVCYGYEA 209
Query: 243 ----TKPFVEIGV--ISADGDKLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLSIDLTR 296
+I V I A+G K + K C + H+ GI+ ++ V PL D R
Sbjct: 210 GGNGNDGSCDIVVYTIDANGVK-TEESWYKAPFCGIIHDCGISDKWVVLPMTPLKCDPER 268
Query: 297 LAFGGPLIKYEHEGYAKIGIMPRYGDADS-VKWFDVEPNCTFHIINCFEDGDEVIVW 352
L G ++ E G++PR G ++W+ + H ++C++ D +V+
Sbjct: 269 LKKGENHWAWDPEEDQWYGVVPRRGGKPGDIRWYRSKNAFQGHTVSCYDTPDGKVVF 325
>UNIPROTKB|Q746V1 [details] [associations]
symbol:GSU3417 "Dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 139 (54.0 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 60/260 (23%), Positives = 108/260 (41%)
Query: 97 GSSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFL-PAIEGD 155
G ++G+GM+ A F G + Y NR V + F +E+ R FL P
Sbjct: 84 GMRKRTLLDGDGMVQAFRF-----GDRGIRYANRFVRTRKFVEEEAAGR--FLHPTWSTQ 136
Query: 156 XXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVN 215
R +++ + +F G+ Y+ E+ P E+D TL T+G
Sbjct: 137 APGGIWTNVWPTERL--LSQ--AGITVFPWRGRLYAFDESSFPYELDPDTLATVGETTFG 192
Query: 216 GAWN-RPFTSHPKKASGTGELVIMGVD-ATKPFVEIGVISADGDKLVHKVDLKLSRCSLC 273
+ +++H K TGE + G+ + FV + +ADG H+ L+L R
Sbjct: 193 LPRDLTTYSAHGKFDPVTGEWLHFGIRYGPRTFVHLTTFNADGTLRRHRA-LELPRAIYM 251
Query: 274 HEIGITQRYNVFLDYPLSIDLTRLAFG----GPLIKYEHEGYAKIGIMPRYGDADSVKWF 329
H+ +T+R+ VF +P+ I G +++ E + + R G+A +
Sbjct: 252 HDWFVTERHVVFHLHPVEIAYWPFLLGIRSMAESLRWRPERGTILMVAERDGEAPP-RLV 310
Query: 330 DVEPNCTFHIINCFEDGDEV 349
+ E +H N +E+ ++
Sbjct: 311 ETEACYLWHTFNAWEERGKI 330
Score = 132 (51.5 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 481 KVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEPVA 540
+ + + F ++CT F P+ + GW++ L++ T S + I+D + D P+A
Sbjct: 430 RTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLLVELYDSRTRTSSLAILDADRIADGPLA 489
Query: 541 KITLSHRVPYGFHG 554
+ L+H VP+ +HG
Sbjct: 490 LVRLTHHVPFSYHG 503
>TIGR_CMR|GSU_3417 [details] [associations]
symbol:GSU_3417 "dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 139 (54.0 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 60/260 (23%), Positives = 108/260 (41%)
Query: 97 GSSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFL-PAIEGD 155
G ++G+GM+ A F G + Y NR V + F +E+ R FL P
Sbjct: 84 GMRKRTLLDGDGMVQAFRF-----GDRGIRYANRFVRTRKFVEEEAAGR--FLHPTWSTQ 136
Query: 156 XXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVN 215
R +++ + +F G+ Y+ E+ P E+D TL T+G
Sbjct: 137 APGGIWTNVWPTERL--LSQ--AGITVFPWRGRLYAFDESSFPYELDPDTLATVGETTFG 192
Query: 216 GAWN-RPFTSHPKKASGTGELVIMGVD-ATKPFVEIGVISADGDKLVHKVDLKLSRCSLC 273
+ +++H K TGE + G+ + FV + +ADG H+ L+L R
Sbjct: 193 LPRDLTTYSAHGKFDPVTGEWLHFGIRYGPRTFVHLTTFNADGTLRRHRA-LELPRAIYM 251
Query: 274 HEIGITQRYNVFLDYPLSIDLTRLAFG----GPLIKYEHEGYAKIGIMPRYGDADSVKWF 329
H+ +T+R+ VF +P+ I G +++ E + + R G+A +
Sbjct: 252 HDWFVTERHVVFHLHPVEIAYWPFLLGIRSMAESLRWRPERGTILMVAERDGEAPP-RLV 310
Query: 330 DVEPNCTFHIINCFEDGDEV 349
+ E +H N +E+ ++
Sbjct: 311 ETEACYLWHTFNAWEERGKI 330
Score = 132 (51.5 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 481 KVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEPVA 540
+ + + F ++CT F P+ + GW++ L++ T S + I+D + D P+A
Sbjct: 430 RTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLLVELYDSRTRTSSLAILDADRIADGPLA 489
Query: 541 KITLSHRVPYGFHG 554
+ L+H VP+ +HG
Sbjct: 490 LVRLTHHVPFSYHG 503
>ZFIN|ZDB-GENE-010508-1 [details] [associations]
symbol:bcmo1a "beta-carotene 15,15'-monooxygenase 1a"
species:7955 "Danio rerio" [GO:0008198 "ferrous iron binding"
evidence=NAS] [GO:0003834 "beta-carotene 15,15'-monooxygenase
activity" evidence=IDA] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0001754 "eye photoreceptor cell
differentiation" evidence=IMP] ZFIN:ZDB-GENE-010508-1 GO:GO:0008198
GO:GO:0030902 HOVERGEN:HBG050679 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 BRENDA:1.14.99.36 GO:GO:0001754
EMBL:AJ290390 IPI:IPI00483690 UniGene:Dr.12383 STRING:Q90WH4
ArrayExpress:Q90WH4 Uniprot:Q90WH4
Length = 516
Score = 134 (52.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 70/307 (22%), Positives = 129/307 (42%)
Query: 271 SLCHEIGITQRYNVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIMPRYGDA 323
S H G+T Y +F++ PL +D+ ++A +K+ E I ++ R
Sbjct: 231 SYYHSFGMTDNYFIFIEQPLKLDILKMATAYLRRVSWASCMKFHPEDSTLIHLIDRNTKK 290
Query: 324 DSVKWFDVEPNCTFHIINCFEDGDEVIVWGCRALESIIPGPDLGLNKFE--------WFS 375
+ F + +H +N FED D +V+ A + LNK + +
Sbjct: 291 EVATKFYTDAMTVYHQVNAFED-DGHVVFDVIAYDDNNLYEFFYLNKLKETMGATNLYCK 349
Query: 376 KKFRHA--ELADESVDTSPDDVPLFSRVYEWRLNMQNGDVKETNLSGTKV--SMDFPMIN 431
KF L+D+ +T D V L Y ++ D K G + ++ P IN
Sbjct: 350 PKFTRFVFPLSDQG-ETGEDLVKL---KYTTASAVKEKDGK-IMCQGEVLCEGVELPRIN 404
Query: 432 GGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENI 491
+ G K +Y Y VD + A+ + K+ + D + ++E+ K ++
Sbjct: 405 YNFNGKKYRYSYMCCVDE-SPVATRIVKF---------DADTKQ-----QIEW-KGDDG- 447
Query: 492 FCTGGAFVPKGRGVEEDDGWIIT-FLHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPY 550
F + F+P+ V+EDDG ++T ++N+ + ++D K F + +A+ L +
Sbjct: 448 FASEPVFIPRPGAVDEDDGVVLTVIINNKPLQGGFLLVLDAKSFKE--IARACLDVEIHM 505
Query: 551 GFHGAFM 557
HG F+
Sbjct: 506 DMHGYFI 512
Score = 122 (48.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 61/255 (23%), Positives = 103/255 (40%)
Query: 62 TNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDG 121
T + G IPE + +G IRNGP +F ++T NH W +G +LH+ K G
Sbjct: 18 TEVKGSIPE-WVQGTLIRNGPG-MFSVGETTY------NH-WFDGMALLHSFAINK---G 65
Query: 122 SWNVVYMNRHVESETFKQEKQRNRS--SFLPAIEGDXXXXXXXXXXXXXRFGKINKYISN 179
V Y +R++ +T+ Q NR S + + I + N
Sbjct: 66 E--VTYRSRYLRGDTYNSNMQANRIVVSEMGTMAYPDPCKNIFSKVITFLSHTIPDFTDN 123
Query: 180 --TNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD----VNGAWNRPFTSHPKKASG-- 231
NI ++ F++ +E + ++ID TLET D + + T + K+ +
Sbjct: 124 CGNNIIKYGNDFHATSETNYIRKIDPVTLETQEKIDYLKYLPVSIVASHTHYDKEGNSYS 183
Query: 232 TGELVI-MGVDATKPFVEIGVISADGDKLVHKVDLKLSR-C------SLCHEIGITQRYN 283
G + G F G DG + + + C S H G+T Y
Sbjct: 184 MGTCIAEKGKTKYMLFKVPGGSRPDGSPPLKSAEAVCTLPCRSLLTPSYYHSFGMTDNYF 243
Query: 284 VFLDYPLSIDLTRLA 298
+F++ PL +D+ ++A
Sbjct: 244 IFIEQPLKLDILKMA 258
>UNIPROTKB|E1C8E0 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016116
"carotenoid metabolic process" evidence=IEA] [GO:0016121 "carotene
catabolic process" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0051881 "regulation of mitochondrial membrane potential"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] GO:GO:0055114
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121 EMBL:AADN02058015
IPI:IPI00602723 Ensembl:ENSGALT00000012775 Uniprot:E1C8E0
Length = 548
Score = 149 (57.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 90/351 (25%), Positives = 142/351 (40%)
Query: 39 DQPLLPSQRNFAPV-DALREAV--LVTNIDGEIPEDFPEGVYIRNGPNPL-FGGLKSTKS 94
+Q LP+ + +P+ + E + I G IP + G +RNGP FG K
Sbjct: 17 EQFTLPTLQCISPLLQTVEETPEPIPAKIKGHIP-GWINGNLLRNGPGKFEFGEEKY--- 72
Query: 95 MFGSSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPA 151
NH W +G +LH + T V Y ++ ++S ++ Q NR S F
Sbjct: 73 -----NH-WFDGMALLHQFQLRNGT-----VTYQSKFLQSNSYLINNQHNRIVVSEFGTL 121
Query: 152 IEGDXXXXXXXXXXXXXRFGKINKYISNTNI--FEHAGKFYSVAENHMPQEIDIFTLETL 209
D RF K N N+ + G +Y EN+ ++D TLE
Sbjct: 122 AMPDPCKSVFARFMS--RFDP-PKPSDNANVSYVVYKGDYYVTGENNCMYKVDPETLEMK 178
Query: 210 G--NWD----VNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVHKV 263
+W VNGA T+HP A G MG K +I K
Sbjct: 179 EKVDWTKFVAVNGA-----TAHPHYAPD-GTAYNMGNSYGKFGTTYNIIEVPPQKSNCNE 232
Query: 264 DLKLSR--CSLC----------HEIGITQRYNVFLDYPLSIDLTRLA---FGG-PL---I 304
L+ ++ CS+ H G+++ Y +F++ P+ ++L R+ F G P+ I
Sbjct: 233 TLEGAKVLCSIAPTDNMKPSYYHSFGMSENYIIFIEQPIKLNLLRIITSKFRGKPISEGI 292
Query: 305 KYEHEGYAKIGIMP-RYGDADSVKWFDVEPNCTFHIINCFEDGDEVIVWGC 354
+E + + ++ R G +W+ +P TFH IN FED V++ C
Sbjct: 293 NWEPQYNTRFHVVDKRTGKVLPGQWY-TKPFVTFHQINAFEDRGCVVLDLC 342
Score = 91 (37.1 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSH 546
E+ + + FVP ED G I++ + + D N S + ++D + F + A++ +
Sbjct: 478 EDGSYPSEPVFVPVPNATAEDSGVILSVVISPDENRSAFLLVLDAETFRELGRAEVPV-- 535
Query: 547 RVPYGFHGAFMS 558
++PYGFHG F S
Sbjct: 536 QMPYGFHGIFSS 547
>UNIPROTKB|E2RS36 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121
EMBL:AAEX03003490 Ensembl:ENSCAFT00000022164 NextBio:20854619
Uniprot:E2RS36
Length = 575
Score = 141 (54.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 73/316 (23%), Positives = 125/316 (39%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHI-WVEGEGMLHALYFKKETDGS 122
+ G+ PE + G +R GP K FG + W +G +LH +K T
Sbjct: 72 VRGQFPE-WLSGYLLRIGPG---------KFEFGKDEYSHWFDGMALLHQFRMEKGT--- 118
Query: 123 WNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISN 179
V Y ++ ++S+T+K +R S F D I +N
Sbjct: 119 --VTYRSKFLQSDTYKANSAHDRIVISEFGTLALPDPCKNVFERFMSKFELPAITDN-TN 175
Query: 180 TNIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPFTSHPKKASGTG 233
N ++ G +Y E + ++DI TLE +W VNGA P A G
Sbjct: 176 VNYVQYKGDYYVSTETNFMNKVDIKTLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMG 235
Query: 234 ELV-----IMGVDATKPF-VEIGVISADGDKLVHKV-DLKLSRCSLCHEIGITQRYNVFL 286
V P V++G + G +++ + + + S H G+T+ Y +F+
Sbjct: 236 NSYGPHGSCYNVIQIPPEKVDLGE-TVHGAQVICSIASAERMKPSYYHSFGMTRNYIIFI 294
Query: 287 DYPLSIDLTRL--------AFGGPLIKYEHEGYAKIGIMPRYGDADSVKWFDVEPNCTFH 338
+ PL ++L ++ AF I +E + + ++ ++ + +P TFH
Sbjct: 295 EQPLKMNLWKIVTSRIRGKAFSDG-ISWEPQYNTRFHVVDKHTGQLLPGMYYTKPFVTFH 353
Query: 339 IINCFEDGDEVIVWGC 354
IN FED V++ C
Sbjct: 354 QINAFEDQGCVVIDLC 369
Score = 99 (39.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSH 546
E+ + + FVP EED G I++ + D N + + ++D K F E + + +
Sbjct: 505 EDGFYPSEPVFVPAPGTREEDGGVILSVVITPDQNENNFLLVLDAKNF--EELGRAEVPV 562
Query: 547 RVPYGFHGAFMS 558
R+PYGFHG F++
Sbjct: 563 RMPYGFHGTFVA 574
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 461 GGLAKLSFEEPDNTESEELIKVEYHKFEE 489
GG+ PD E+ L+ ++ FEE
Sbjct: 526 GGVILSVVITPDQNENNFLLVLDAKNFEE 554
>UNIPROTKB|Q52008 [details] [associations]
symbol:lsdB "Lignostilbene-alpha,beta-dioxygenase isozyme
III" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron
ion binding" evidence=ISS] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 GO:GO:0050054 EMBL:S80637 PIR:JC4324
Uniprot:Q52008
Length = 490
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 83/354 (23%), Positives = 150/354 (42%)
Query: 106 GEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAIEGDXXXXXXXXXX 165
G+GM+ F DG + + R+ +++ +K E++ +S F A
Sbjct: 61 GDGMVSLFRFH---DGK--IDFRQRYAQTDKWKVERKAGKSLF-GAYRNPLTDDASVQ-- 112
Query: 166 XXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAW-NRPFTS 224
G I + +NTN+ HAGK Y++ E+ +D TLET G + +G N+ F++
Sbjct: 113 -----GMI-RGTANTNVMVHAGKLYAMKEDSPCLIMDPLTLETEGYTNFDGKLKNQTFSA 166
Query: 225 HPKKASGTGELVIMGVDATKPFV-EIGVISAD-GDKLVHKVDLKLSRCSLCHEIGITQRY 282
H K TG G AT + D L+ + + ++ + H+ G+T+ Y
Sbjct: 167 HAKIDPVTGNFCNFGYAATGLLTTDCSYFEIDPAGNLLFETEFQVPYYCMMHDYGLTEHY 226
Query: 283 NVFLDYPLSIDLTRLAFGGPLIKYEHEGYAKIGIMPRYGDADS--VKWFDVEPNCTF--H 338
+F P S + RL G P ++ +G++PR + V+WF P F H
Sbjct: 227 AIFHIVPCSPNWDRLKAGLPHFGFDTTLPVWLGVVPRGPGVTNKDVRWFKA-PKTIFASH 285
Query: 339 IINCFEDGDEVIVWGCRALESIIPGPDLGLNKFEWFSKKFRHAELADESVDTSPDDVPLF 398
++N FE+G ++ P N F +F + +P D P+
Sbjct: 286 VMNAFEEGSKIH----------FDTPQAENNAFPFFP-----------DIHGAPFD-PVA 323
Query: 399 SRVY--EWRLNMQNG--DVKETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVD 448
+R Y W +++ + D E + + +FP ++ Y G ++G+ ++D
Sbjct: 324 ARPYLHRWTVDLGSNSEDFAEVRQLTSWID-EFPRVDARYVGQPYRHGWGLVMD 376
>UNIPROTKB|Q7XU29 [details] [associations]
symbol:OSJNBb0034G17.9 "OSJNBb0034G17.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0016121 "carotene catabolic process"
evidence=ISS] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS] GO:GO:0009570 GO:GO:0009733 GO:GO:0009926
EMBL:AP008210 EMBL:CM000141 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 GO:GO:0010223
GO:GO:0045549 GO:GO:0016124 EMBL:AL663000 RefSeq:NP_001053491.1
UniGene:Os.26493 UniGene:Os.56287 UniGene:Os.7470
EnsemblPlants:LOC_Os04g46470.1 GeneID:4336591 KEGG:osa:4336591
HOGENOM:HOG000240947 OMA:VMKNVAN ProtClustDB:PLN02969
Uniprot:Q7XU29
Length = 609
Score = 143 (55.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 64/255 (25%), Positives = 113/255 (44%)
Query: 53 DALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHA 112
D +++ + +G IP DFP G Y GP G+ S GS+ H ++G G L +
Sbjct: 65 DECLDSIPLRVTEGAIPPDFPAGTYYLAGP-----GIFSDDH--GSTVHP-LDGHGYLRS 116
Query: 113 LYFKKETDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAIEGDXXXXXXXXXXXXXRFGK 172
F+ G + Y R VE+ K+E+ R+ +S+ G K
Sbjct: 117 FRFRP---GDRTIHYSARFVETAA-KREESRDGASWRFTHRGPFSVLQGGKKVGNV---K 169
Query: 173 INKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG-AWNRPFTSHPKKASG 231
+ K ++NT++ G+ + E P E+D TLET+G +D+ G A + A+
Sbjct: 170 VMKNVANTSVLRWGGRLLCLWEGGQPYEVDPRTLETVGPFDLLGLAAADDNKATNASAAR 229
Query: 232 TGELVIMGVDAT----KPFVEIGVISADGDKLV--HKVDLKLSRCSL--CH--EIGITQR 281
L G+DA +P + GV G +L+ +K+D + R + C+ ++ + +
Sbjct: 230 RPWLQEAGLDAAARLLRPVLS-GVFDMPGKRLLAHYKIDPRRGRLLMVACNAEDMLLPRS 288
Query: 282 YNVFLDYPLSIDLTR 296
+ F ++ DL +
Sbjct: 289 HFTFYEFDAHFDLVQ 303
Score = 94 (38.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 35/133 (26%), Positives = 57/133 (42%)
Query: 426 DFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELIKVEYH 485
DFP IN Y +N++ Y A +ASG ++ L F+ + + +
Sbjct: 484 DFPAINPSYANQRNRFVY-------AGAASGSRRF--LPYFPFDSVVKVDVSDG-SARWW 533
Query: 486 KFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEP--VAKIT 543
+ F FVP G G ED G+++ + + + ++D KK E VAK+
Sbjct: 534 STDGRKFVGEPVFVPTGGG--EDGGYVLLVEYAVSKHRCHLVVLDAKKIGTENALVAKLE 591
Query: 544 LSHRV--PYGFHG 554
+ + P GFHG
Sbjct: 592 VPKNLTFPMGFHG 604
>UNIPROTKB|F1SM94 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE
GO:GO:0016121 EMBL:CU657951 RefSeq:XP_003129902.2 UniGene:Ssc.25348
Ensembl:ENSSSCT00000016405 GeneID:100517547 KEGG:ssc:100517547
Uniprot:F1SM94
Length = 575
Score = 140 (54.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 71/321 (22%), Positives = 129/321 (40%)
Query: 59 VLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKE 118
++ + G +P+ + G +R GP G + K + NH W +G +LH +K
Sbjct: 67 IISAQVRGHVPK-WLNGYLLRIGP----GKFEFGKDKY---NH-WFDGMALLHQFKIEKG 117
Query: 119 TDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINK 175
T V+Y ++ ++S+T+K +R S F D +
Sbjct: 118 T-----VMYRSKFLQSDTYKANSVHDRIVVSEFGTLALPDPCKNIFERFMSKFELPAMTD 172
Query: 176 YISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPFTSHPKKA 229
+N N ++ G +Y E + ++DI TLE +W VNGA P A
Sbjct: 173 N-TNVNYVQYKGDYYLSTETNFMNKVDIETLEKKEKVDWSKFIAVNGATAHPHYDPDGTA 231
Query: 230 SGTGELVIMGVDAT-KPFVEIGVISADGDKLVHKVDLKLS-------RCSLCHEIGITQR 281
G G + + + AD ++ +H + S + S H G+T+
Sbjct: 232 YNMGNS--FGSHGSCYHVIRVPPEKADLEETIHGAQVICSIASAERMKPSYYHSFGMTRN 289
Query: 282 YNVFLDYPLSIDLTRL--------AFGGPLIKYEHEGYAKIGIMPRYGDADSVKWFDVEP 333
Y +F++ P+ ++L ++ AF I +E + + ++ ++ + +P
Sbjct: 290 YIIFIEQPVKMNLWKIITSKIRGKAFSDG-ISWEPQYNTRFHVVDKHTGQLLPGMYYSKP 348
Query: 334 NCTFHIINCFEDGDEVIVWGC 354
TFH IN FED V++ C
Sbjct: 349 FVTFHQINAFEDQGCVVIDLC 369
Score = 94 (38.1 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSH 546
EE+ + + FVP EED G I++ + + N + ++D K F E + + +
Sbjct: 505 EESFYPSEPIFVPVPGTNEEDGGVILSVVITPNQNERNFLLVLDAKNF--EELGRAEVPV 562
Query: 547 RVPYGFHGAFMSI 559
++PYGFHG F++I
Sbjct: 563 QMPYGFHGTFVTI 575
>UNIPROTKB|Q83CU2 [details] [associations]
symbol:CBU_1011 "Lignostilbene-alpha,beta-dioxygenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 125 (49.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 50/183 (27%), Positives = 79/183 (43%)
Query: 178 SNTNIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWDVNGAWNRPFTSHP----KKASG 231
+N N+ A KF ++ E MP D TLE +G N++ N T+HP + G
Sbjct: 44 ANVNVSMIADKFVALTETPMPIVFDPQTLERMGVINYEDKLKGNLT-TAHPHYDFETKEG 102
Query: 232 TGELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLS 291
L + +T + S + L+ + +K H G+TQ Y + +YP
Sbjct: 103 INYLTVFSAKSTSQIYRVSHHSKTRE-LLGSIPVK--EPGYMHSFGMTQNYVILAEYPFF 159
Query: 292 ID-LTRLAFGGPLIKYEHEGYAKIGIMPRYGDADSVKW--FDVEPNCTFHIINCFEDGDE 348
++ L L G P I+ + K G D + K+ + E FH +N FE+ D+
Sbjct: 160 VNPLNLLLNGNPFIENFNWKPNK-GTHFYLLDRKTGKFQNYKTESFFAFHHVNAFEENDK 218
Query: 349 VIV 351
VIV
Sbjct: 219 VIV 221
Score = 102 (41.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 470 EPDNTESEELIKVEYH----KFEENIFCTGG--AFVPKGRGVEEDDGWIITFLHNEDTNI 523
+P+N + L+K++ K + C G FV +EDDG I++ + N
Sbjct: 303 DPNNFLNR-LLKIDVQQKATKIWKETMCYPGEPVFVSLPNAKKEDDGVILSVVLNAQKGN 361
Query: 524 SQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAF 556
S + I+D F + +A+ ++ H +P+GFHG F
Sbjct: 362 SFLLILDAVSFKE--IARASVPHHIPFGFHGQF 392
>TIGR_CMR|CBU_1011 [details] [associations]
symbol:CBU_1011 "dioxygenase, putative" species:227377
"Coxiella burnetii RSA 493" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 125 (49.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 50/183 (27%), Positives = 79/183 (43%)
Query: 178 SNTNIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWDVNGAWNRPFTSHP----KKASG 231
+N N+ A KF ++ E MP D TLE +G N++ N T+HP + G
Sbjct: 44 ANVNVSMIADKFVALTETPMPIVFDPQTLERMGVINYEDKLKGNLT-TAHPHYDFETKEG 102
Query: 232 TGELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLS 291
L + +T + S + L+ + +K H G+TQ Y + +YP
Sbjct: 103 INYLTVFSAKSTSQIYRVSHHSKTRE-LLGSIPVK--EPGYMHSFGMTQNYVILAEYPFF 159
Query: 292 ID-LTRLAFGGPLIKYEHEGYAKIGIMPRYGDADSVKW--FDVEPNCTFHIINCFEDGDE 348
++ L L G P I+ + K G D + K+ + E FH +N FE+ D+
Sbjct: 160 VNPLNLLLNGNPFIENFNWKPNK-GTHFYLLDRKTGKFQNYKTESFFAFHHVNAFEENDK 218
Query: 349 VIV 351
VIV
Sbjct: 219 VIV 221
Score = 102 (41.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 470 EPDNTESEELIKVEYH----KFEENIFCTGG--AFVPKGRGVEEDDGWIITFLHNEDTNI 523
+P+N + L+K++ K + C G FV +EDDG I++ + N
Sbjct: 303 DPNNFLNR-LLKIDVQQKATKIWKETMCYPGEPVFVSLPNAKKEDDGVILSVVLNAQKGN 361
Query: 524 SQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAF 556
S + I+D F + +A+ ++ H +P+GFHG F
Sbjct: 362 SFLLILDAVSFKE--IARASVPHHIPFGFHGQF 392
>UNIPROTKB|Q2KEQ1 [details] [associations]
symbol:MGCH7_ch7g985 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CM000230 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 Uniprot:Q2KEQ1
Length = 489
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 86/399 (21%), Positives = 164/399 (41%)
Query: 178 SNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAW-NRPFTSHPKKASGTGELV 236
+NTNI G+ + E+ P +D TLET+ +G + FT+HPK + TGEL+
Sbjct: 111 ANTNIIYFNGRLLACKEDSPPYCLDPETLETMWLETFDGQLPSLTFTAHPKVDAHTGELI 170
Query: 237 IMGVDATKPFV-EIGVISADGDK-LVHKVDLKLSRCSLCHEIGITQRYNVFLDYPLSIDL 294
G +A ++ + D ++ V L ++ H+ +T+ + + DL
Sbjct: 171 CFGYEARGDGTPDVCYFTFDKKAAILETVWLVAPVVAMIHDFAVTENW--------TCDL 222
Query: 295 TRLAFGGPLIKYEHEGYAKIGIMPRYGDADS-VKWFD-------VEPNCTFHIINCFEDG 346
R+ GG ++ + +G++PR G S +K D P F N F G
Sbjct: 223 ERMEKGGEHWQWNPDIPFYLGVLPRRGAKGSDIKPADQLNPRRPFPPRQWFKAPNSFP-G 281
Query: 347 DEVIVWGCRALESIIPGPDLGLNKFEWFSKKFRHAELADESVDTSPDDVPLFSRVYEWRL 406
V + + + P N F W+ ++ SPD + +R+ +
Sbjct: 282 HTVNAYEDESGNIVFDLPLTNTNVFFWWP----------DAQGNSPDPKEIAARLVRFTF 331
Query: 407 NMQNG--DVKETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVD-----SIAS----SAS 455
+ ++ D+ E + ++ +FP ++ + ++ + + D +A+
Sbjct: 332 DPRSAERDLPEPEVL-CRLDCEFPRVDDRVSMARHARAFFDMTDPALPTDMAAIMRLGGG 390
Query: 456 GMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVPKGRGVEEDDGWIITF 515
G P Y + L + + H +E + VP+ R V E DGW++
Sbjct: 391 GHPMYNCIGHLDYA---TGRLDRYFPGSTHLVQEPVV------VPRSRDVPEGDGWVVVL 441
Query: 516 LHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHG 554
++N S+++I+DT+ + + A + L R+ G HG
Sbjct: 442 VNNYANMSSELHIVDTRDLS-KAQAIVYLPVRLRAGLHG 479
>ZFIN|ZDB-GENE-040426-1191 [details] [associations]
symbol:bcmo1b "beta-carotene 15,15'-monooxygenase
1b" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-1191 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:BC056789 IPI:IPI00503910
RefSeq:NP_956902.1 UniGene:Dr.84019 ProteinModelPortal:Q6PGY1
STRING:Q6PGY1 GeneID:393580 KEGG:dre:393580 CTD:393580
InParanoid:Q6PGY1 NextBio:20814600 Uniprot:Q6PGY1
Length = 525
Score = 128 (50.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 54/196 (27%), Positives = 93/196 (47%)
Query: 181 NIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWDVNGAWNRPFTSHPK--KASGTGEL- 235
NI ++ +Y+ +E + +ID TLETLG N+ + A N T+HP + T +
Sbjct: 127 NIIKYGEDYYASSEVNYINQIDPLTLETLGRTNYRNHIAINLA-TAHPHYDEEGNTYNMG 185
Query: 236 -VIMGVDATKPFVEIGVISADGDKLVHKVDL-KLSR-CSL----------CHEIGITQRY 282
IM + K +V V + DK K L ++ + CS+ H G+T+ Y
Sbjct: 186 TAIMNLGRPK-YVIFKVPANTSDKENKKPALSEVEQVCSIPIRPSLYPSYFHSFGMTENY 244
Query: 283 NVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIM-PRYGDADSVKWFDVEPN 334
+F++ +D+ +LA G +K++ + ++ + G A SVK++ +P
Sbjct: 245 IIFVEQAFKLDIVKLATAYFRDINWGSCLKFDQDDINVFHLVNKKTGKAVSVKYY-TDPF 303
Query: 335 CTFHIINCFEDGDEVI 350
TFH IN +ED V+
Sbjct: 304 VTFHHINAYEDDGHVV 319
Score = 126 (49.4 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 51/174 (29%), Positives = 81/174 (46%)
Query: 60 LVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKET 119
L ++ G IP + +G +RNGP GL S + S H W +G ++H+ FK
Sbjct: 16 LKADVSGSIPP-WLQGTLLRNGP-----GLFSVGNT--SYKH-WFDGMALIHSFTFK--- 63
Query: 120 DGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKY 176
DG V Y +++++SET+K+ +R S F + D I +
Sbjct: 64 DGE--VFYRSKYLKSETYKKNIAADRIVVSEFGTMVYPDPCKNIFSRAFSYM-MNAIPDF 120
Query: 177 ISNT--NIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWDVNGAWNRPFTSHP 226
N NI ++ +Y+ +E + +ID TLETLG N+ + A N T+HP
Sbjct: 121 TDNNLINIIKYGEDYYASSEVNYINQIDPLTLETLGRTNYRNHIAINLA-TAHP 173
Score = 68 (29.0 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 485 HKF--EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAK 541
HK EE + + F+ V+EDDG I++ + + + + ++D K F + +A+
Sbjct: 447 HKIWTEEECYPSEPVFIASPDAVDEDDGVILSSVVSFNPQRPPFLVVLDAKSFKE--IAR 504
Query: 542 ITLSHRVPYGFHGAFM 557
T+ + HG F+
Sbjct: 505 ATIDASIHMDLHGLFI 520
Score = 59 (25.8 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 38/157 (24%), Positives = 65/157 (41%)
Query: 301 GPLIKYEHEGYAKIGIM-PRYGDADSVKWFDVEPNCTFHIINCFEDGDEV----IVWGCR 355
G +K++ + ++ + G A SVK++ +P TFH IN +ED V I +
Sbjct: 270 GSCLKFDQDDINVFHLVNKKTGKAVSVKYY-TDPFVTFHHINAYEDDGHVVFDLITYKDS 328
Query: 356 ALESI--IPGPDLGLNKFEWFSKKFRHAE----LADESVDT-SPDDVPL--FSRVYEWRL 406
L + I + +F +K F + +VD +P D+ L +
Sbjct: 329 KLYDMFYIQNMKQDVKRFIETNKDFAQPVCQRFVLPVNVDKETPQDINLVKLQDTTATAV 388
Query: 407 NMQNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYGY 443
++G V T K ++ P IN + KN+Y Y
Sbjct: 389 LKEDGSVYCTPDIIFK-GLELPAINYKFNSKKNRYFY 424
>ZFIN|ZDB-GENE-010509-1 [details] [associations]
symbol:bco2l "beta-carotene 15, 15-dioxygenase 2,
like" species:7955 "Danio rerio" [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
ZFIN:ZDB-GENE-010509-1 GO:GO:0016702 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AJ290391
IPI:IPI00493963 RefSeq:NP_571874.1 UniGene:Dr.79440 GeneID:84041
KEGG:dre:84041 CTD:84041 InParanoid:Q90WH3 NextBio:20934203
ArrayExpress:Q90WH3 Uniprot:Q90WH3
Length = 549
Score = 129 (50.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 76/292 (26%), Positives = 118/292 (40%)
Query: 32 DQMFEFVDQPLLPSQRNFAPVDALREAV------LVTNIDGEIPEDFPEGVYIRNGPNPL 85
DQM++ PS + L +V + T I G+IP + G ++RNGP
Sbjct: 7 DQMYKVPANKKRPSASGLEFIGPLVSSVEEIPDPITTLIKGQIPS-WINGSFLRNGPGKF 65
Query: 86 -FGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRN 144
FG K T H W +G ++H K DG V Y +R ++S+++ Q ++N
Sbjct: 66 EFGESKFT--------H-WFDGMALMHRFNIK---DGQ--VTYSSRFLQSDSYVQNSEKN 111
Query: 145 R---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNT--NIFEHAGKFYSVAENHMPQ 199
R S F D RF +I K N N ++ G FY E + +
Sbjct: 112 RIVVSEFGTLATPDPCKNIFARFFS--RF-QIPKTTDNAGVNFVKYKGDFYVSTETNFMR 168
Query: 200 EIDIFTLETLG--NWDVNGAWNRPFTSHPKKASGTGELVIMGVD-ATKPFVEIGVISADG 256
+ID +LET +W A + T+HP G MG K F + G
Sbjct: 169 KIDPVSLETKEKVDWSKFIAVSAA-TAHPHY-DREGATYNMGNSYGRKGFFYHILRVPPG 226
Query: 257 DKLVHKVDLKLSR--CSL----------CHEIGITQRYNVFLDYPLSIDLTR 296
+K DL + CS+ H +++ Y VF++ P+ +DL +
Sbjct: 227 EKQDDDADLSGAEILCSIPAADPRKPSYYHSFVMSENYIVFIEQPIKLDLLK 278
Score = 84 (34.6 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 491 IFCTGGAFVPKGRGVEEDDGWIITFLHN-EDTNISQVYIIDTKKFTDEPVAKITLSHRVP 549
+F + F+P +EDDG +++ + + S + ++D K FT+ A++ + +P
Sbjct: 481 LFPSEPVFIPAPDAQDEDDGVVMSVIITPREKKSSFLLVLDAKTFTELGRAEVPVD--IP 538
Query: 550 YGFHGAF 556
YG HG F
Sbjct: 539 YGTHGLF 545
>MGI|MGI:1926923 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase"
species:10090 "Mus musculus" [GO:0001523 "retinoid metabolic
process" evidence=ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=ISO;ISS;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS;IDA] UniPathway:UPA00912 MGI:MGI:1926923
GO:GO:0046872 GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630
eggNOG:COG3670 GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AJ278064 EMBL:AF271298 EMBL:AF294899 EMBL:AY114302
EMBL:AY114294 EMBL:AY114295 EMBL:AY114296 EMBL:AY114297
EMBL:AY114298 EMBL:AY114299 EMBL:AY114300 EMBL:AY114301
EMBL:AK054171 IPI:IPI00122199 RefSeq:NP_067461.2 UniGene:Mm.174133
ProteinModelPortal:Q9JJS6 SMR:Q9JJS6 STRING:Q9JJS6
PhosphoSite:Q9JJS6 PRIDE:Q9JJS6 Ensembl:ENSMUST00000034308
GeneID:63857 KEGG:mmu:63857 InParanoid:Q9JJS6 BRENDA:1.14.99.36
NextBio:319783 Bgee:Q9JJS6 CleanEx:MM_BCMO1 Genevestigator:Q9JJS6
GermOnline:ENSMUSG00000031845 Uniprot:Q9JJS6
Length = 566
Score = 116 (45.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 68/302 (22%), Positives = 127/302 (42%)
Query: 271 SLCHEIGITQRYNVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIMPRYGDA 323
S H G+T+ Y VFL+ P +D+ ++A + ++ E I I+ +
Sbjct: 234 SYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMSFDREDKTYIHIIDQRTRK 293
Query: 324 DSVKWFDVEPNCTFHIINCFEDGDEVIVWGCRALESIIPGPDLGLNKFEWFSKKFRHAEL 383
F +P FH +N +E+ GC L +I D L ++ F + +
Sbjct: 294 PVPTKFYTDPMVVFHHVNAYEED------GC-VLFDVIAYEDSSL--YQLFYLANLNKDF 344
Query: 384 ADESVDTSPDDVPLFSRVYEWRLNMQNGDVKETNLSGTKVSMDFPMI---NGGYTGIKNK 440
++S TS VP R + L++ +NL KVS G+ + +
Sbjct: 345 EEKSRLTS---VPTLRR-FAVPLHVDKDAEVGSNL--VKVSSTTATALKEKDGHVYCQPE 398
Query: 441 YGYTQI-VDSIASSASGMP-KYGGLAKLSFEE-PDNTESEELIKVEYHKF-EENIFCTGG 496
Y + + I + +G P +Y A++ + P +++ K+ EE+ +
Sbjct: 399 VLYEGLELPRINYAYNGKPYRYIFAAEVQWSPVPTKILKYDILTKSSLKWSEESCWPAEP 458
Query: 497 AFVPKGRGVEEDDGWIITFLHNEDTN-ISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FVP +EDDG I++ + + D + + I+D K FT+ +A+ ++ + HG
Sbjct: 459 LFVPTPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTE--LARASVDADMHLDLHGL 516
Query: 556 FM 557
F+
Sbjct: 517 FI 518
Score = 98 (39.6 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 50/183 (27%), Positives = 76/183 (41%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSW 123
+ G IP + +G +RNGP G+ + NH W +G +LH+ + DG
Sbjct: 20 VTGSIPA-WLQGTLLRNGP-----GMHTVGE--SKYNH-WFDGLALLHSFSIR---DGE- 66
Query: 124 NVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNT 180
V Y +++++S+T+ + NR S F D I + N
Sbjct: 67 -VFYRSKYLQSDTYIANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSH-TIPDFTDNC 124
Query: 181 --NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG--AWNRPFTSHPKKASGTGELV 236
NI + FY+ E + ++ID TLETL D A N TSHP G ++
Sbjct: 125 LINIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLA-TSHPHYDEA-GNVL 182
Query: 237 IMG 239
MG
Sbjct: 183 NMG 185
>UNIPROTKB|E9PJJ1 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AP002884 HGNC:HGNC:18503 ChiTaRS:BCO2 IPI:IPI00985076
ProteinModelPortal:E9PJJ1 SMR:E9PJJ1 Ensembl:ENST00000532593
ArrayExpress:E9PJJ1 Bgee:E9PJJ1 Uniprot:E9PJJ1
Length = 474
Score = 114 (45.2 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 59/214 (27%), Positives = 94/214 (43%)
Query: 171 GKINKYISNTNI--FEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPF 222
GK NTN+ + G +Y E + ++DI TLE +W VNGA
Sbjct: 64 GKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGA----- 118
Query: 223 TSHPK-KASGTGELVIMGVDATKPF-VEIGVISADGDKL-----VHKVDLKLS------- 268
T+HP GT MG ++ P+ VI +K+ +H V + S
Sbjct: 119 TAHPHYDLDGTA--YNMG-NSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKG 175
Query: 269 RCSLCHEIGITQRYNVFLDYPLSIDLTRLAFG---GPL----IKYEHEGYAKIGIMP-RY 320
+ S H G+T+ Y +F++ PL ++L ++A G I +E + + ++ R
Sbjct: 176 KPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRT 235
Query: 321 GDADSVKWFDVEPNCTFHIINCFEDGDEVIVWGC 354
G +++ +P TFH IN FED VI+ C
Sbjct: 236 GQLLPGRYYS-KPFVTFHQINAFEDQGCVIIDLC 268
Score = 97 (39.2 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSH 546
E+ + + FVP EED G I++ + + N S + ++D K F E + + +
Sbjct: 404 EDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNF--EELGRAEVPV 461
Query: 547 RVPYGFHGAFMSI 559
++PYGFHG F+ I
Sbjct: 462 QMPYGFHGTFIPI 474
Score = 75 (31.5 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 35/130 (26%), Positives = 51/130 (39%)
Query: 109 MLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXX 165
+LH K T V Y ++ ++S+T+K +NR S F D
Sbjct: 3 LLHQFRMAKGT-----VTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFM 57
Query: 166 XXXRF-GKINKYISNTNI--FEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNG 216
GK NTN+ + G +Y E + ++DI TLE +W VNG
Sbjct: 58 SRFELPGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNG 117
Query: 217 AWNRPFTSHP 226
A T+HP
Sbjct: 118 A-----TAHP 122
Score = 43 (20.2 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 445 QIVDSIASSASGMPKY 460
Q++ SIAS+ G P Y
Sbjct: 164 QVICSIASTEKGKPSY 179
>UNIPROTKB|Q9BYV7 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016119 "carotene metabolic process"
evidence=IDA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IDA] [GO:0042573 "retinoic acid
metabolic process" evidence=NAS] [GO:0042574 "retinal metabolic
process" evidence=NAS] [GO:0005622 "intracellular" evidence=IC]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0016121
"carotene catabolic process" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISS;TAS] [GO:0016116 "carotenoid metabolic
process" evidence=ISS] [GO:0051881 "regulation of mitochondrial
membrane potential" evidence=ISS] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=ISS]
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AF276432 EMBL:AK027801 EMBL:EF444956
EMBL:AP002884 EMBL:AJ290393 IPI:IPI00472555 IPI:IPI00479961
IPI:IPI00978312 RefSeq:NP_001032367.2 RefSeq:NP_001243326.1
UniGene:Hs.728325 ProteinModelPortal:Q9BYV7 SMR:Q9BYV7
STRING:Q9BYV7 PhosphoSite:Q9BYV7 DMDM:308153680 PaxDb:Q9BYV7
PRIDE:Q9BYV7 Ensembl:ENST00000357685 Ensembl:ENST00000393032
Ensembl:ENST00000438022 Ensembl:ENST00000526088
Ensembl:ENST00000531169 GeneID:83875 KEGG:hsa:83875 UCSC:uc001pne.1
UCSC:uc009yyn.3 CTD:83875 GeneCards:GC11P112046 HGNC:HGNC:18503
HPA:HPA039825 HPA:HPA040695 MIM:611740 neXtProt:NX_Q9BYV7
PharmGKB:PA162377424 InParanoid:Q9BYV7 KO:K10252 OMA:VSLNAPE
OrthoDB:EOG45B1FD BioCyc:MetaCyc:G66-33846-MONOMER ChiTaRS:BCO2
GenomeRNAi:83875 NextBio:72911 ArrayExpress:Q9BYV7 Bgee:Q9BYV7
CleanEx:HS_BCO2 Genevestigator:Q9BYV7 GermOnline:ENSG00000197580
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 Uniprot:Q9BYV7
Length = 579
Score = 114 (45.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 59/214 (27%), Positives = 94/214 (43%)
Query: 171 GKINKYISNTNI--FEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPF 222
GK NTN+ + G +Y E + ++DI TLE +W VNGA
Sbjct: 169 GKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGA----- 223
Query: 223 TSHPK-KASGTGELVIMGVDATKPF-VEIGVISADGDKL-----VHKVDLKLS------- 268
T+HP GT MG ++ P+ VI +K+ +H V + S
Sbjct: 224 TAHPHYDLDGTA--YNMG-NSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKG 280
Query: 269 RCSLCHEIGITQRYNVFLDYPLSIDLTRLAFG---GPL----IKYEHEGYAKIGIMP-RY 320
+ S H G+T+ Y +F++ PL ++L ++A G I +E + + ++ R
Sbjct: 281 KPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRT 340
Query: 321 GDADSVKWFDVEPNCTFHIINCFEDGDEVIVWGC 354
G +++ +P TFH IN FED VI+ C
Sbjct: 341 GQLLPGRYYS-KPFVTFHQINAFEDQGCVIIDLC 373
Score = 103 (41.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 50/177 (28%), Positives = 70/177 (39%)
Query: 70 EDFPEGVYIR---NGPNPLFGGLKST---KSMFGSS--NHIWVEGEGMLHALYFKKETDG 121
E+ P G+ R + P L G L K FG NH W +G +LH K T
Sbjct: 62 EEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNH-WFDGMALLHQFRMAKGT-- 118
Query: 122 SWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRF-GKINKYI 177
V Y ++ ++S+T+K +NR S F D GK
Sbjct: 119 ---VTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMT 175
Query: 178 SNTNI--FEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPFTSHP 226
NTN+ + G +Y E + ++DI TLE +W VNGA T+HP
Sbjct: 176 DNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGA-----TAHP 227
Score = 97 (39.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSH 546
E+ + + FVP EED G I++ + + N S + ++D K F E + + +
Sbjct: 509 EDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNF--EELGRAEVPV 566
Query: 547 RVPYGFHGAFMSI 559
++PYGFHG F+ I
Sbjct: 567 QMPYGFHGTFIPI 579
Score = 43 (20.2 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 445 QIVDSIASSASGMPKY 460
Q++ SIAS+ G P Y
Sbjct: 269 QVICSIASTEKGKPSY 284
>RGD|70981 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase 1" species:10116
"Rattus norvegicus" [GO:0001523 "retinoid metabolic process"
evidence=IEA;ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IEA;ISO;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0042572 "retinol
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 107 (42.7 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 63/227 (27%), Positives = 93/227 (40%)
Query: 60 LVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKET 119
L + G IP + +G +RNGP G+ + NH W +G +LH+ +
Sbjct: 16 LRATVTGSIPA-WLQGTLLRNGP-----GMHTVGD--SKYNH-WFDGLALLHSFSIR--- 63
Query: 120 DGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKY 176
DG V Y +++++S+T+ + NR S F D I +
Sbjct: 64 DGE--VFYRSKYLQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSH-TIPDF 120
Query: 177 ISNT--NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG--AWNRPFTSHPKKASGT 232
N NI + FY+ E + ++ID TLETL D A N TSHP
Sbjct: 121 TDNCLINIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLA-TSHPHYDEA- 178
Query: 233 GELVIMGVD-ATK---PFVEIGV-ISADGDKLVHKVDLKLSR--CSL 272
G ++ MG A K +V + +A G K K LK S CS+
Sbjct: 179 GNVLNMGTSIADKGGTKYVMFKIPATAPGSKKKGKNPLKHSEVFCSI 225
Score = 73 (30.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 23/95 (24%), Positives = 41/95 (43%)
Query: 271 SLCHEIGITQRYNVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIMPRYGDA 323
S H G+T+ Y VFL+ P +D+ ++A + + E I I+ +
Sbjct: 234 SYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMTFCKEDKTYIHIIDQKTRK 293
Query: 324 DSVKWFDVEPNCTFHIINCFEDGDEVIVWGCRALE 358
F +P FH +N +E+ D +++ A E
Sbjct: 294 PVPTKFYTDPMVVFHHVNAYEE-DGCVLFDVIAYE 327
Score = 72 (30.4 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTN-ISQVYIIDTKKFTDEPVAKITLSH 546
EE+ + FVP +EDDG I++ + + D + + I+D K FT+ +A+ ++
Sbjct: 450 EESCWPAEPLFVPTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTE--LARASVDV 507
Query: 547 RVPYGFHGAFM 557
+ HG F+
Sbjct: 508 DMHLDLHGLFI 518
>UNIPROTKB|Q91XT5 [details] [associations]
symbol:Bcmo1 "Beta,beta-carotene 15,15'-monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004497 "monooxygenase
activity" evidence=IEA] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 107 (42.7 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 63/227 (27%), Positives = 93/227 (40%)
Query: 60 LVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKET 119
L + G IP + +G +RNGP G+ + NH W +G +LH+ +
Sbjct: 16 LRATVTGSIPA-WLQGTLLRNGP-----GMHTVGD--SKYNH-WFDGLALLHSFSIR--- 63
Query: 120 DGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKY 176
DG V Y +++++S+T+ + NR S F D I +
Sbjct: 64 DGE--VFYRSKYLQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSH-TIPDF 120
Query: 177 ISNT--NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG--AWNRPFTSHPKKASGT 232
N NI + FY+ E + ++ID TLETL D A N TSHP
Sbjct: 121 TDNCLINIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLA-TSHPHYDEA- 178
Query: 233 GELVIMGVD-ATK---PFVEIGV-ISADGDKLVHKVDLKLSR--CSL 272
G ++ MG A K +V + +A G K K LK S CS+
Sbjct: 179 GNVLNMGTSIADKGGTKYVMFKIPATAPGSKKKGKNPLKHSEVFCSI 225
Score = 73 (30.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 23/95 (24%), Positives = 41/95 (43%)
Query: 271 SLCHEIGITQRYNVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIMPRYGDA 323
S H G+T+ Y VFL+ P +D+ ++A + + E I I+ +
Sbjct: 234 SYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMTFCKEDKTYIHIIDQKTRK 293
Query: 324 DSVKWFDVEPNCTFHIINCFEDGDEVIVWGCRALE 358
F +P FH +N +E+ D +++ A E
Sbjct: 294 PVPTKFYTDPMVVFHHVNAYEE-DGCVLFDVIAYE 327
Score = 72 (30.4 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTN-ISQVYIIDTKKFTDEPVAKITLSH 546
EE+ + FVP +EDDG I++ + + D + + I+D K FT+ +A+ ++
Sbjct: 450 EESCWPAEPLFVPTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTE--LARASVDV 507
Query: 547 RVPYGFHGAFM 557
+ HG F+
Sbjct: 508 DMHLDLHGLFI 518
>UNIPROTKB|F1N2Z9 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 EMBL:DAAA02040291
EMBL:DAAA02040290 IPI:IPI00729522 Ensembl:ENSBTAT00000048395
OMA:ICSIASE Uniprot:F1N2Z9
Length = 530
Score = 160 (61.4 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 86/327 (26%), Positives = 133/327 (40%)
Query: 59 VLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKE 118
V+ + G PE + G +R GP G + K + NH W +G +LH +K
Sbjct: 45 VISAGVQGHFPE-WLSGYLLRVGP----GKFEFGKDKY---NH-WFDGMALLHQFKVEKG 95
Query: 119 TDGSWNVVYMNRHVESETFKQEKQRNRSSFLPAIEGDXXXXXXXXXXXXXRFGKINK--Y 176
T V Y ++ ++S+T+K R+R + + G K K
Sbjct: 96 T-----VTYRSKFLQSDTYKANSDRDR--IVISEFGTLALPDPCKNVFERFMSKFEKPAI 148
Query: 177 ISNTNI--FEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPFTSHPKK 228
NTN+ + G +Y E + ++DI TLE NW VNGA T+HP
Sbjct: 149 TDNTNVNYVLYKGDYYLSTETNFMNKVDIETLEKTEKVNWTKFIAVNGA-----TAHPHY 203
Query: 229 ASGTGELVIMGVDATKPFVEIGVI-----SADGDKLVHKVDLKLS-------RCSLCHEI 276
G MG K VI +D + +H + S R S H
Sbjct: 204 -DPDGTTYNMGNSYGKHGSCYNVIRVPPEKSDPGETIHGAQVICSIASEEGMRPSYYHSF 262
Query: 277 GITQRYNVFLDYPLSIDLTRL--------AFGGPLIKYEHEGYAKIGIMPRY-GDADSVK 327
G+T+ Y +F++ PL I+L R+ AF I +E + + ++ ++ G
Sbjct: 263 GMTRNYIIFIEQPLKINLWRIISSKIRGKAFSDG-ISWEPQYNTRFHVVDKHTGQLLPGM 321
Query: 328 WFDVEPNCTFHIINCFEDGDEVIVWGC 354
+F +P TFH IN FED V++ C
Sbjct: 322 YFS-KPFVTFHQINAFEDQGCVVIDLC 347
Score = 41 (19.5 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIIT 514
E+ + + FVP +EDDG I++
Sbjct: 483 EDGFYPSEPVFVPVPGASKEDDGVILS 509
>UNIPROTKB|Q8HXG8 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9541 "Macaca fascicularis" [GO:0016119 "carotene metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] GO:GO:0005739
GO:GO:0046872 GO:GO:0016702 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AB097557
ProteinModelPortal:Q8HXG8 GO:GO:0016119 Uniprot:Q8HXG8
Length = 556
Score = 109 (43.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 54/213 (25%), Positives = 91/213 (42%)
Query: 171 GKINKYISNTNI--FEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPF 222
GK NTN+ + G +Y E + ++DI TLE +W VNGA
Sbjct: 146 GKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGA----- 200
Query: 223 TSHPKKASGTGELVIMGVDATKPF------VEIGVISADGDKLVHKVDLKLS-------R 269
T+HP G MG ++ PF + + D ++ H + S +
Sbjct: 201 TAHPHY-DPDGTAYNMG-NSFGPFGFSYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGK 258
Query: 270 CSLCHEIGITQRYNVFLDYPLSIDLTRLAFG---GPL----IKYEHEGYAKIGIMPRY-G 321
S H G+T+ Y +F++ PL ++L ++A G I +E + + ++ ++ G
Sbjct: 259 PSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVDKHTG 318
Query: 322 DADSVKWFDVEPNCTFHIINCFEDGDEVIVWGC 354
+++ +P FH IN FED VI+ C
Sbjct: 319 QLLPGRYYS-KPFVAFHHINAFEDQGCVIIDLC 350
Score = 106 (42.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 79/300 (26%), Positives = 116/300 (38%)
Query: 70 EDFPEGVYIR---NGPNPLFGGLKST---KSMFGSS--NHIWVEGEGMLHALYFKKETDG 121
E+ P G+ R + P L G L K FG NH W +G +LH K T
Sbjct: 39 EEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNH-WFDGMALLHQFRMAKGT-- 95
Query: 122 SWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRF-GKINKYI 177
V Y ++ ++S+T+K +NR S F D GK
Sbjct: 96 ---VTYRSKFLQSDTYKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMT 152
Query: 178 SNTNI--FEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPFTSHPKKA 229
NTN+ + G +Y E + ++DI TLE +W VNGA T+HP
Sbjct: 153 DNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGA-----TAHPHY- 206
Query: 230 SGTGELVIMGVDATKPF-VEIGVISADGDKLVHKVDLKLSRCS---LCHEIGITQRYNVF 285
G MG ++ PF VI +K VDL+ + +C I T++
Sbjct: 207 DPDGTAYNMG-NSFGPFGFSYKVIRVPPEK----VDLEETTHGAQVIC-SIAPTEKGKP- 259
Query: 286 LDYPLSIDLTR--LAFGGPLIKYEHEGYAKIGIMPRYGDADSVKWFDVEPNCT--FHIIN 341
Y S +TR + F +K A I + +D + W EP C FH+++
Sbjct: 260 -SYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGK-AFSDGISW---EPQCNTRFHVVD 314
Score = 94 (38.1 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSH 546
E+ + + FVP EED G I++ + + N S + ++D K F E + + +
Sbjct: 486 EDGFYPSEPVFVPVPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNF--EELGRAEVPV 543
Query: 547 RVPYGFHGAFMSI 559
++PYGFHG F+ I
Sbjct: 544 QMPYGFHGTFIPI 556
>UNIPROTKB|Q9HAY6 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9606 "Homo sapiens" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0001523
"retinoid metabolic process" evidence=IDA;TAS] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0008202 "steroid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0035238 "vitamin A biosynthetic process"
evidence=NAS] [GO:0042574 "retinal metabolic process" evidence=NAS]
Reactome:REACT_111217 UniPathway:UPA00912 GO:GO:0005829
GO:GO:0008202 GO:GO:0046872 GO:GO:0004497 EMBL:CH471114
GO:GO:0042572 GO:GO:0042574 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AF294900 EMBL:AK001592
EMBL:BC126210 EMBL:BC126212 IPI:IPI00307216 RefSeq:NP_059125.2
UniGene:Hs.212172 ProteinModelPortal:Q9HAY6 SMR:Q9HAY6
IntAct:Q9HAY6 STRING:Q9HAY6 PhosphoSite:Q9HAY6 DMDM:41688803
PRIDE:Q9HAY6 DNASU:53630 Ensembl:ENST00000258168 GeneID:53630
KEGG:hsa:53630 UCSC:uc002fgn.1 GeneCards:GC16P081272
HGNC:HGNC:13815 HPA:HPA043811 MIM:115300 MIM:605748
neXtProt:NX_Q9HAY6 Orphanet:199285 PharmGKB:PA37812
InParanoid:Q9HAY6 PhylomeDB:Q9HAY6 BioCyc:MetaCyc:HS06050-MONOMER
ChiTaRS:BCMO1 GenomeRNAi:53630 NextBio:56108 ArrayExpress:Q9HAY6
Bgee:Q9HAY6 CleanEx:HS_BCMO1 Genevestigator:Q9HAY6
GermOnline:ENSG00000135697 GO:GO:0035238 Uniprot:Q9HAY6
Length = 547
Score = 96 (38.9 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 50/184 (27%), Positives = 80/184 (43%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKST-KSMFGSSNHIWVEGEGMLHALYFKKETDGS 122
+ G+IP + +G +RNGP G+ + +S + NH W +G +LH+ + DG
Sbjct: 20 VTGKIPA-WLQGTLLRNGP-----GMHTVGESRY---NH-WFDGLALLHSFTIR---DGE 66
Query: 123 WNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISN 179
V Y ++++ S+T+ + NR S F D I + N
Sbjct: 67 --VYYRSKYLRSDTYNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSH-TIPDFTDN 123
Query: 180 T--NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG--AWNRPFTSHPKKASGTGEL 235
NI + FY+ +E + ++I+ TLETL D A N TSHP G +
Sbjct: 124 CLINIMKCGEDFYATSETNYIRKINPQTLETLEKVDYRKYVAVNLA-TSHPHYDEA-GNV 181
Query: 236 VIMG 239
+ MG
Sbjct: 182 LNMG 185
Score = 74 (31.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTN-ISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAF 556
FVP +EDDG I++ + + D + + I+D K FT+ +A+ ++ + HG F
Sbjct: 460 FVPAPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTE--LARASVDVDMHMDLHGLF 517
Query: 557 MS-IPVQTQKASRNE 570
++ + T+K + +E
Sbjct: 518 ITDMDWDTKKQAASE 532
Score = 72 (30.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 23/95 (24%), Positives = 40/95 (42%)
Query: 271 SLCHEIGITQRYNVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIMPRYGDA 323
S H G+T+ Y +FL+ P +D+ ++A + + E I I+ +
Sbjct: 234 SYYHSFGVTENYVIFLEQPFRLDILKMATAYIRRMSWASCLAFHREEKTYIHIIDQRTRQ 293
Query: 324 DSVKWFDVEPNCTFHIINCFEDGDEVIVWGCRALE 358
F + FH +N +E+ D IV+ A E
Sbjct: 294 PVQTKFYTDAMVVFHHVNAYEE-DGCIVFDVIAYE 327
>TAIR|locus:2134093 [details] [associations]
symbol:CCD8 "carotenoid cleavage dioxygenase 8"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;RCA;NAS] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0010223 "secondary shoot formation"
evidence=IGI;IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009850 "auxin metabolic process"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0016121 "carotene catabolic process" evidence=IDA] [GO:0016124
"xanthophyll catabolic process" evidence=IDA] [GO:0009926 "auxin
polar transport" evidence=IMP] [GO:0009830 "cell wall modification
involved in abscission" evidence=RCA] GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009926 GO:GO:0046872
GO:GO:0016702 GO:GO:0009965 EMBL:AL161582 eggNOG:COG3670
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0016121 GO:GO:0010223 GO:GO:0016124 EMBL:AY074264
EMBL:AY133732 IPI:IPI00536697 PIR:T10688 RefSeq:NP_195007.2
UniGene:At.31633 ProteinModelPortal:Q8VY26 SMR:Q8VY26 STRING:Q8VY26
PRIDE:Q8VY26 EnsemblPlants:AT4G32810.1 GeneID:829417
KEGG:ath:AT4G32810 TAIR:At4g32810 HOGENOM:HOG000237971
InParanoid:Q8VY26 PhylomeDB:Q8VY26 ProtClustDB:CLSN2680232
BioCyc:ARA:AT4G32810-MONOMER BioCyc:MetaCyc:AT4G32810-MONOMER
Genevestigator:Q8VY26 Uniprot:Q8VY26
Length = 570
Score = 108 (43.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 98/405 (24%), Positives = 157/405 (38%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSW 123
+ G+IP + G Y+RNGP GL + H++ +G L L F DG
Sbjct: 97 VQGKIPT-WLNGTYLRNGP-----GLWNIGDH--DFRHLF-DGYSTLVKLQF----DGG- 142
Query: 124 NVVYMNRHVESETFKQEKQRNRSSFLPAIEGDXXXXXX----XXXXXXXRF--GKINKYI 177
+ +R +ES+ +K K+ NR + E R G+
Sbjct: 143 RIFAAHRLLESDAYKAAKKHNRLCYREFSETPKSVIINKNPFSGIGEIVRLFSGESLTDN 202
Query: 178 SNTNIFEHA-GKFYSVAENHMPQE-IDIFTLETLGNWDVNGAWNRPF--TSHPKKASGTG 233
+NT + + G+ + E +D TLET+G ++ + + ++HP + T
Sbjct: 203 ANTGVIKLGDGRVMCLTETQKGSILVDHETLETIGKFEYDDVLSDHMIQSAHPI-VTET- 260
Query: 234 ELVIMGVDATKPFVEIGVISADGDK--LVHKVDLKLSRCS--LCHEIGITQRYNVFLDYP 289
E+ + D KP + + A +K +V +V + H +T+ Y V + P
Sbjct: 261 EMWTLIPDLVKPGYRVVRMEAGSNKREVVGRVRCRSGSWGPGWVHSFAVTENYVVIPEMP 320
Query: 290 LSIDLTRL--AFGGPLIKYE---HEGYAKIGIMPRYGDADSVKWFDVEPNCTFHIINCFE 344
L + L A PL K+E +G A I +M + + V +V TFH IN +E
Sbjct: 321 LRYSVKNLLRAEPTPLYKFEWCPQDG-AFIHVMSKL-TGEVVASVEVPAYVTFHFINAYE 378
Query: 345 D---GD---EVIVWGCRALESIIPGPDLGLNKFEWFSKKFRHAELADESVDTSPDDVPLF 398
+ GD VI+ C E L + + + H L D + +PL
Sbjct: 379 EDKNGDGKATVIIADC--CEHNADTRILDMLRLDTLRSSHGHDVLPDARIGRFR--IPLD 434
Query: 399 SRVYEWRLNMQNGDVKETNLSGTKVSMDFPMINGGYTGIKNKYGY 443
Y +L E G +MD IN Y G K +Y Y
Sbjct: 435 GSKYG-KLET----AVEAEKHGR--AMDMCSINPLYLGQKYRYVY 472
Score = 91 (37.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 424 SMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELIKVE 483
+MD IN Y G K +Y Y A P L+K+ E + +K
Sbjct: 453 AMDMCSINPLYLGQKYRYVYA----CGAQRPCNFPN--ALSKVDIVE-------KKVK-N 498
Query: 484 YHKFEENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEPVAKIT 543
+H E + + FVP+ EDDG +I+ + +E+ S ++D F E +A+
Sbjct: 499 WH--EHGMIPSEPFFVPRPGATHEDDGVVISIV-SEENGGSFAILLDGSSF--EEIARAK 553
Query: 544 LSHRVPYGFHGAFM 557
+ +PYG HG ++
Sbjct: 554 FPYGLPYGLHGCWI 567
>MGI|MGI:2177469 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016116 "carotenoid metabolic
process" evidence=IMP] [GO:0016119 "carotene metabolic process"
evidence=ISO;IDA] [GO:0016121 "carotene catabolic process"
evidence=ISO;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISO;IDA] [GO:0042573 "retinoic
acid metabolic process" evidence=NAS] [GO:0042574 "retinal
metabolic process" evidence=NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IMP] MGI:MGI:2177469
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE OrthoDB:EOG45B1FD
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 EMBL:AJ290392
IPI:IPI00118726 RefSeq:NP_573480.1 UniGene:Mm.390149
ProteinModelPortal:Q99NF1 SMR:Q99NF1 PhosphoSite:Q99NF1
PaxDb:Q99NF1 PRIDE:Q99NF1 Ensembl:ENSMUST00000119103 GeneID:170752
KEGG:mmu:170752 InParanoid:Q99NF1 NextBio:370330 Bgee:Q99NF1
Genevestigator:Q99NF1 GermOnline:ENSMUSG00000032066 Uniprot:Q99NF1
Length = 532
Score = 100 (40.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSH 546
EE + + FVP EED G I++ + + + S + ++D K FT+ A++ +
Sbjct: 462 EEGFYPSEPVFVPVPGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTELGRAEVPV-- 519
Query: 547 RVPYGFHGAFMSI 559
++PYGFHG F+ I
Sbjct: 520 QMPYGFHGTFVPI 532
Score = 97 (39.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 57/251 (22%), Positives = 93/251 (37%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSW 123
+ G IPE + G +R GP G + K + NH W +G +LH ++ T
Sbjct: 29 VRGHIPE-WLNGYLLRVGP----GKFEFGKDRY---NH-WFDGMALLHQFRMERGT---- 75
Query: 124 NVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNT 180
V Y ++ ++S+T+K R S F D + +N
Sbjct: 76 -VTYKSKFLQSDTYKANSAGGRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDN-TNV 133
Query: 181 NIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPFTSHPKKASGTGE 234
N ++ G +Y E + ++DI LE +W VNGA P A G
Sbjct: 134 NFVQYKGDYYMSTETNFMNKVDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGN 193
Query: 235 LV--------IMGVDATKPFVEIGVISADGDKLVHKVDLKLSRCSLCHEIGITQRYNVFL 286
I+ V K E G L + + S H G+T+ Y +F+
Sbjct: 194 SYGPRGSCYNIIRVPPKKK--EPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYIIFV 251
Query: 287 DYPLSIDLTRL 297
+ P+ + L ++
Sbjct: 252 EQPVKMKLWKI 262
Score = 91 (37.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 45/199 (22%), Positives = 79/199 (39%)
Query: 178 SNTNIFEHAGKFYSVAENHMPQEIDIFTLETLG--NWD----VNGAWNRPFTSHPKKASG 231
+N N ++ G +Y E + ++DI LE +W VNGA P A
Sbjct: 131 TNVNFVQYKGDYYMSTETNFMNKVDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYN 190
Query: 232 TGELV--------IMGVDATKPFVEIGVISADGDKLVHKVDLKLSRCSLCHEIGITQRYN 283
G I+ V K E G L + + S H G+T+ Y
Sbjct: 191 MGNSYGPRGSCYNIIRVPPKKK--EPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYI 248
Query: 284 VFLDYPLSIDLTRLAF----GGPL---IKYEHEGYAKIGIMPRY-GDADSVKWFDVEPNC 335
+F++ P+ + L ++ G P I +E + + ++ ++ G ++ + P
Sbjct: 249 IFVEQPVKMKLWKIITSKIRGKPFADGISWEPQYNTRFHVVDKHTGQLLPGMYYSM-PFL 307
Query: 336 TFHIINCFEDGDEVIVWGC 354
T+H IN FED +++ C
Sbjct: 308 TYHQINAFEDQGCIVIDLC 326
>UNIPROTKB|Q9I993 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9031 "Gallus gallus" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA]
[GO:0001523 "retinoid metabolic process" evidence=IDA]
UniPathway:UPA00912 GO:GO:0046872 GO:GO:0004497 GO:GO:0042572
GO:GO:0001523 EMBL:AJ271386 IPI:IPI00595044 RefSeq:NP_989966.1
UniGene:Gga.41 STRING:Q9I993 Ensembl:ENSGALT00000008685
GeneID:395346 KEGG:gga:395346 CTD:53630 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InParanoid:Q9I993 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 BioCyc:MetaCyc:MONOMER-17624 NextBio:20815431
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Uniprot:Q9I993
Length = 526
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 72/258 (27%), Positives = 114/258 (44%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSW 123
+ G++P + +GV +RNGP + TK NH W +G +LH+ FK +G
Sbjct: 20 VQGQLPT-WLQGVLLRNGPG--MHTIGDTKY-----NH-WFDGLALLHSFTFK---NGE- 66
Query: 124 NVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNT 180
V Y ++++ S+T+ + NR S F D I ++ N
Sbjct: 67 -VYYRSKYLRSDTYNCNIEANRIVVSEFGTMAYPDPCKNIFAKAFSYLSH-TIPEFTDNC 124
Query: 181 --NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG--AWNRPFTSHPKKASGTGELV 236
NI + +Y+ +E + ++ID TLETL D + A N TSHP S G ++
Sbjct: 125 LINIMKTGDDYYATSETNFIRKIDPQTLETLDKVDYSKYVAVNLA-TSHPHYDSA-GNIL 182
Query: 237 IMG---VDATKP-FVEIGVISADGDKLVHKVDLKLSR--CSL----------CHEIGITQ 280
MG VD + +V + S+ +K K K CS+ H GIT+
Sbjct: 183 NMGTSIVDKGRTKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITE 242
Query: 281 RYNVFLDYPLSIDLTRLA 298
Y VF++ P +D+ +LA
Sbjct: 243 NYIVFIEQPFKLDIVKLA 260
Score = 137 (53.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 100/418 (23%), Positives = 173/418 (41%)
Query: 181 NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG--AWNRPFTSHPKKASGTGELVIM 238
NI + +Y+ +E + ++ID TLETL D + A N TSHP S G ++ M
Sbjct: 127 NIMKTGDDYYATSETNFIRKIDPQTLETLDKVDYSKYVAVNLA-TSHPHYDSA-GNILNM 184
Query: 239 G---VDATKP-FVEIGVISADGDKLVHKVDLKLSR--CSL----------CHEIGITQRY 282
G VD + +V + S+ +K K K CS+ H GIT+ Y
Sbjct: 185 GTSIVDKGRTKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITENY 244
Query: 283 NVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIMPRYGDADSVKWFDVEPNC 335
VF++ P +D+ +LA + + E + R + F +
Sbjct: 245 IVFIEQPFKLDIVKLATAYIRGVNWASCLSFHKEDKTWFHFVDRKTKKEVSTKFYTDALV 304
Query: 336 TFHIINCFEDGDEVIVWGCRALESIIPGPDLGLNKFEWFSKKFRHAELADE--SVDTSPD 393
+H IN +E+ V+ I+ D L + K + E+ ++ S+ T
Sbjct: 305 LYHHINAYEEDGHVVF-------DIVAYRDNSLYDMFYLKKLDKDFEVNNKLTSIPTCKR 357
Query: 394 DV-PL-FSRVYEWRLNMQN-----GDVKETNLS---GTKV---SMDFPMINGGYTGIKNK 440
V PL + + E N+ VKE + S ++ ++ P +N Y G K K
Sbjct: 358 FVVPLQYDKDAEVGSNLVKLPTSATAVKEKDGSIYCQPEILCEGIELPRVNYDYNGKKYK 417
Query: 441 YGYTQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENIFCTGGAFVP 500
Y Y A+ P +AKL N +++E++ H E++ + + FVP
Sbjct: 418 YVY-------ATEVQWSPVPTKIAKL------NVQTKEVL----HWGEDHCWPSEPIFVP 460
Query: 501 KGRGVEEDDGWIITFLHNEDTNISQ-VYIIDTKKFTDEPVAKITLSHRVPYGFHGAFM 557
EED+G ++T + + N + + I+D K F + + + T++ + HG F+
Sbjct: 461 SPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKE--LGRATVNVEMHLDLHGMFI 516
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/58 (24%), Positives = 21/58 (36%)
Query: 13 ISVPKTIKNSFVKLLDVFVDQMFEFVDQPLLPSQRNFAPVDALREAVLVTNIDGEIPE 70
++ P KN F K + EF D L+ + A E + ID + E
Sbjct: 96 MAYPDPCKNIFAKAFSYLSHTIPEFTDNCLINIMKTGDDYYATSETNFIRKIDPQTLE 153
>WB|WBGene00018755 [details] [associations]
symbol:bcmo-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:FO080905
RefSeq:NP_494694.2 ProteinModelPortal:Q9TXT9 PaxDb:Q9TXT9
EnsemblMetazoa:F53C3.12 GeneID:173733 KEGG:cel:CELE_F53C3.12
CTD:173733 WormBase:F53C3.12 HOGENOM:HOG000153586 InParanoid:Q9TXT9
OMA:MEAQRIV NextBio:880851 Uniprot:Q9TXT9
Length = 530
Score = 106 (42.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 41/136 (30%), Positives = 60/136 (44%)
Query: 423 VSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELIKV 482
+SM+FP + +K Y Y + S A G+ K E D+ KV
Sbjct: 404 ISMEFPRYHWEKINMK-PYNY--VYGSSVLGAQKSETLPGIVKADLENGDH-------KV 453
Query: 483 EYHKFEENIFCTGGAFVPKGRGVEEDDG-WIITFLHNEDTNISQVYIIDTKKFTDEPVAK 541
+ ++ I C FVP GV EDDG I+ + D V I++ K T+ +A+
Sbjct: 454 WRRENDKQI-CGEPIFVPNPEGVREDDGILIVPVMTISDGQRPFVLILEAKNLTE--IAR 510
Query: 542 ITLSH-RVPYGFHGAF 556
T+ R+P GFH AF
Sbjct: 511 YTIPEARIPLGFH-AF 525
Score = 85 (35.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 80/338 (23%), Positives = 132/338 (39%)
Query: 47 RNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEG 106
R F D + E L + G +P + +G +RNGP +F + TK H W +G
Sbjct: 8 RLFHNFDNVIEPKLCST-SGSVPS-YLKGTMLRNGPG-MFE-IGDTKYQ-----H-WFDG 57
Query: 107 EGMLHALYFKKETDGS--WNVVYMNRHVESETFKQEKQRN-RSSFLPAIEGDXXXXXXXX 163
G + +F+ DG ++ Y+ E+ E QR SF A D
Sbjct: 58 MGFIQRYHFE---DGKMYYSARYLES--ENYKKNMEAQRIVTGSFGTASFPDPCKSIFSR 112
Query: 164 XXXXXRFGKINKYISNTNI-FEHAGK-FYSVAENHMPQEIDIFTLETLGNWDVNG-AWNR 220
F + N N+ F G Y+ E +D+ +L+TL D +
Sbjct: 113 FFSS--FVQSEGIHDNANVAFAPVGDGLYACTETPNMHRVDLDSLDTLEPVDFSKYVALH 170
Query: 221 PFTSHPKKASGTGELVIMGV----DATKPFVEIGV---ISADGDKL-VHKVDLKLSRCS- 271
T+H + G++ +G DA F + +D D+ H + RCS
Sbjct: 171 TCTAH-QLFDENGDVYNIGSRFGPDAAHVFTVTKNPKNLQSDSDRSWEHTTKIGEIRCSE 229
Query: 272 -----LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL-------IKYEHEGYAKIGIM-P 318
H G+++ Y + + P+ ID+ + + +K+ + KI I+
Sbjct: 230 TFYPTYMHSFGMSENYLIMFESPIRIDIKKFIMKRFITTTFRDCMKWHADKDVKIFILNK 289
Query: 319 RYGDADSVKWFDVEPNCTFHIINCFE-DGDEVIVWGCR 355
+ G+ +K + P TFH N FE DG V+ + CR
Sbjct: 290 KTGEQVPLK-LKMAPFFTFHHANTFERDGCLVVDY-CR 325
>RGD|621396 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] [GO:0042574 "retinal
metabolic process" evidence=IMP] [GO:0044297 "cell body"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IMP]
RGD:621396 GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 GO:GO:0042574 GO:GO:0044297
GO:GO:0001654 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF035673 IPI:IPI00196676
RefSeq:NP_446014.1 UniGene:Rn.76724 ProteinModelPortal:O70276
GeneID:89826 KEGG:rno:89826 NextBio:617740 Genevestigator:O70276
Uniprot:O70276
Length = 533
Score = 124 (48.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 78/341 (22%), Positives = 141/341 (41%)
Query: 38 VDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFG 97
++ P ++ F V+ L L ++ G IP + G +R GP LF ++ +
Sbjct: 5 IEHPAGGYKKLFETVEEL-STPLTAHVTGRIPL-WLTGSLLRCGPG-LFE--VGSEPFY- 58
Query: 98 SSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEG 154
H++ +G+ +LH FK +G +V Y R + ++ + + R + F
Sbjct: 59 ---HLF-DGQALLHKFDFK---EG--HVTYYRRFIRTDAYVRAMTEKRIVITEFGTCAFP 109
Query: 155 DXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDV 214
D R ++ + NI+ +Y+ E + +I+ TLET+ D+
Sbjct: 110 DPCKNIFSRFFSYFRGVEVTDN-ALVNIYPVGEDYYACTETNFITKINPETLETIKQVDL 168
Query: 215 -NGAWNRPFTSHPK-KASGTGELV--IMGVDATKPF--VEIGVISADGDKLVHKVDLKLS 268
N T+HP ++ GT + G + T + ++I + AD + ++K ++ +
Sbjct: 169 CNYVSVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNIIKIPPLKADKEDPINKSEVVVQ 228
Query: 269 -RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIM 317
CS H G+T Y VF++ P+ I+L + L Y E +G+
Sbjct: 229 FPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNESMGVW 288
Query: 318 PRYGDADSVKWFD----VEPNCTFHIINCFEDGDEVIVWGC 354
D K+F+ P FH IN +ED +IV C
Sbjct: 289 LHVADKKRRKYFNNKYRTSPFNLFHHINTYEDNGFLIVDLC 329
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV + +EEDDG +++ + + Y +++ K ++ +A+ + +P FHG
Sbjct: 472 FVSQPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSE--IARAEVETNIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 23/92 (25%), Positives = 34/92 (36%)
Query: 415 ETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAK--LSFEEPD 472
E SG + + +FP IN G K Y Y + + K K ++EPD
Sbjct: 406 EVLFSGPRQAFEFPQINYQKCGGK-PYTYAYGLGLNHFVPDKLCKLNVKTKEIWMWQEPD 464
Query: 473 NTESEELIKVEYHKFEENIFCTGGAFVPKGRG 504
+ SE + + EE+ V G G
Sbjct: 465 SYPSEPIFVSQPDALEEDDGVVLSVVVSPGAG 496
>FB|FBgn0002937 [details] [associations]
symbol:ninaB "neither inactivation nor afterpotential B"
species:7227 "Drosophila melanogaster" [GO:0007604
"phototransduction, UV" evidence=IMP] [GO:0016063 "rhodopsin
biosynthetic process" evidence=IDA;IMP] [GO:0007603
"phototransduction, visible light" evidence=IMP] [GO:0007602
"phototransduction" evidence=TAS] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IMP;IDA;NAS] [GO:0016119
"carotene metabolic process" evidence=IDA] [GO:0035238 "vitamin A
biosynthetic process" evidence=IMP;IDA] [GO:0009110 "vitamin
biosynthetic process" evidence=IMP] [GO:0010436 "carotenoid
dioxygenase activity" evidence=IDA] [GO:0042574 "retinal metabolic
process" evidence=IDA] [GO:0004744 "retinal isomerase activity"
evidence=IDA] GO:GO:0042574 GO:GO:0007602 eggNOG:COG3670
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0035238 GO:GO:0016119 GO:GO:0010436 GO:GO:0016063
GO:GO:0004744 EMBL:AB041507 ProteinModelPortal:Q9NKW9 SMR:Q9NKW9
STRING:Q9NKW9 PRIDE:Q9NKW9 FlyBase:FBgn0002937 InParanoid:Q9NKW9
OrthoDB:EOG4TTF03 ArrayExpress:Q9NKW9 Bgee:Q9NKW9 Uniprot:Q9NKW9
Length = 620
Score = 137 (53.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 82/324 (25%), Positives = 127/324 (39%)
Query: 57 EAVLVTNIDGEIPEDFPE---GVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHAL 113
E +V I+G P+ G +RNGP G K FG H++ + +LH
Sbjct: 50 EREIVDPIEGHHSGHIPKWICGSLLRNGP----GSWKVGDMTFG---HLF-DCSALLHRF 101
Query: 114 YFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXR- 169
+ +G V Y NR V++ET ++ + R + F A D R
Sbjct: 102 AIR---NG--RVTYQNRFVDTETLRKNRSAQRIVVTEFGTAAVPDPCHSIFDRFAAIFRP 156
Query: 170 -FGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLET---LGNWDVNGAWNRPFTSH 225
G N IS I+ ++Y+ E I+ TL T + D G N TSH
Sbjct: 157 DSGTDNSMIS---IYPFGDQYYTFTETPFMHRINPCTLATEARICTTDFVGVVNH--TSH 211
Query: 226 PKKASGTGELVIMGVDATKPFVEIGVIS-ADGDKL---VHKVDLKLSRCSL----CHEIG 277
P +G + +G T+ ++ G+++ H V R L H G
Sbjct: 212 PHVLP-SGTVYNLGTTMTRSGPAYTILCFPHGEQMFEDAHVVATLPCRWKLHPGYMHTFG 270
Query: 278 ITQRYNVFLDYPLSIDLT---RLAFGGP----LIKYEHEGYAKIGIMPRYGDADSVKWFD 330
+T Y V ++ PLS+ LT + GG +K+ + ++ R V+ ++
Sbjct: 271 LTDHYFVIVEQPLSVSLTEYIKAQLGGQNLSACLKWFEDRPTLFHLIDRVS-GKLVQTYE 329
Query: 331 VEPNCTFHIINCFEDGDEVIVWGC 354
E HIINCFE V+V C
Sbjct: 330 SEAFFYLHIINCFERDGHVVVDIC 353
Score = 54 (24.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQV--YIIDTKKFTDEPVAKITLS 545
EEN++ + FVP EDDG I+ + N V ++ K T+ +
Sbjct: 545 EENVYPSEPIFVPSPDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTN 604
Query: 546 HRVPYGFHGAF 556
VP HG F
Sbjct: 605 GPVPKCLHGWF 615
>MGI|MGI:98001 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10090
"Mus musculus" [GO:0004744 "retinal isomerase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IMP] MGI:MGI:98001 GO:GO:0005783 GO:GO:0005886
GO:GO:0008286 GO:GO:0046872 GO:GO:0007601 GO:GO:0042574
eggNOG:COG3670 HOGENOM:HOG000232156 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090
GO:GO:0007468 GO:GO:0071257 GO:GO:0060042 GO:GO:0004744
OrthoDB:EOG47M1XK GO:GO:0052885 GO:GO:0052884 EMBL:AF410461
EMBL:AC163272 EMBL:AH011240 IPI:IPI00131304 UniGene:Mm.131708
ProteinModelPortal:Q91ZQ5 SMR:Q91ZQ5 STRING:Q91ZQ5
PhosphoSite:Q91ZQ5 PRIDE:Q91ZQ5 InParanoid:Q91ZQ5 CleanEx:MM_RPE65
Genevestigator:Q91ZQ5 GermOnline:ENSMUSG00000028174 Uniprot:Q91ZQ5
Length = 533
Score = 120 (47.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 77/341 (22%), Positives = 142/341 (41%)
Query: 38 VDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFG 97
++ P ++ F V+ L + L ++ G IP + G +R GP LF ++ +
Sbjct: 5 IEHPAGGYKKLFETVEEL-SSPLTAHVTGRIPL-WLTGSLLRCGPG-LFE--VGSEPFY- 58
Query: 98 SSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEG 154
H++ +G+ +LH FK +G +V Y R + ++ + + R + F
Sbjct: 59 ---HLF-DGQALLHKFDFK---EG--HVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFP 109
Query: 155 DXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDV 214
D + ++ + NI+ +Y+ E + +I+ TLET+ D+
Sbjct: 110 DPCKNIFSRFFSYFKGVEVTDN-ALVNIYPVGEDYYACTETNFITKINPETLETIKQVDL 168
Query: 215 -NGAWNRPFTSHPK-KASGTGELV--IMGVDATKPF--VEIGVISADGDKLVHKVDLKLS 268
N T+HP ++ GT + G + T + ++I + AD + ++K ++ +
Sbjct: 169 CNYISVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNIIKIPPLKADKEDPINKSEVVVQ 228
Query: 269 -RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIM 317
CS H G+T Y VF++ P+ I+L + L Y E +G+
Sbjct: 229 FPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNESMGVW 288
Query: 318 PRYGDADSVKWFD----VEPNCTFHIINCFEDGDEVIVWGC 354
D K+F+ P FH IN +ED +IV C
Sbjct: 289 LHVADKKRRKYFNNKYRTSPFNLFHHINTYEDNGFLIVDLC 329
Score = 66 (28.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV + +EEDDG +++ + + Y +++ K ++ +A+ + +P FHG
Sbjct: 472 FVSQPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSE--IARAEVETNIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
>WB|WBGene00012914 [details] [associations]
symbol:bcmo-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AL110485
OMA:TSMEFPR HOGENOM:HOG000153586 RefSeq:NP_496729.2
UniGene:Cel.14051 ProteinModelPortal:Q9U2E4 SMR:Q9U2E4
DIP:DIP-26226N IntAct:Q9U2E4 MINT:MINT-1067701 PaxDb:Q9U2E4
EnsemblMetazoa:Y46G5A.24 GeneID:189959 KEGG:cel:CELE_Y46G5A.24
UCSC:Y46G5A.24 CTD:189959 WormBase:Y46G5A.24 InParanoid:Q9U2E4
NextBio:944184 Uniprot:Q9U2E4
Length = 529
Score = 112 (44.5 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 70/307 (22%), Positives = 129/307 (42%)
Query: 274 HEIGITQRYNVFLDYPLSIDLTRLAFGG-------PLIKYEHEGYAKIGIMPRYGDADSV 326
H G+++ Y V + P+ + L + +++ + I I+ +
Sbjct: 237 HSFGMSENYLVMFESPVRLHLQKYLLSEFVRATYHDCLEWHGDKDVSIFILNKKTGEQLP 296
Query: 327 KWFDVEPNCTFHIINCFE-DGDEVIVWGCRA-----LESIIPGPDLGLNKFEWFSKKFRH 380
+ P TFH N FE DG V+ + CR ++++ ++ +F++ +K +
Sbjct: 297 LTLKMNPFFTFHHANTFEKDGCLVMDY-CRIENAGKFDTLLIS-NMKTGEFQYDAKFLPY 354
Query: 381 AE--LADESVDTS--PDDVPLFSRVYE---WRLNMQNGDVKETNLSGTKVSMDFPMINGG 433
+ SV +S P D L S + + +G ++ T + SM+FP +
Sbjct: 355 LTRVIVPMSVSSSAKPGDNLLKSVPWASGCTSILQDDGSIRLTERRVCETSMEFPRYHWE 414
Query: 434 YTGIKN-KYGY-TQIVDSIASSASGMPKYGGLAKLSFEEPDNTESEELIKVEYHKFEENI 491
+K +Y + + + I + +G+ K A L F LI +++ +
Sbjct: 415 KINMKEYRYVFGSTVFGRIDGNLAGVVK----ADLKF-------GNHLI---WNRENPHQ 460
Query: 492 FCTGGAFVPKGRGVEEDDG-WIITFLHNEDTNISQVYIIDTKKFTDEPVAKITLSH-RVP 549
C FVP G+EEDDG I+ + + + + V I+D K T E A+ + R+P
Sbjct: 461 ICGEPIFVPNPEGIEEDDGILIVPIMSSSEKQVPFVLILDAK--TLEETARFEIPEARIP 518
Query: 550 YGFHGAF 556
GFH AF
Sbjct: 519 LGFH-AF 524
Score = 74 (31.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 38/149 (25%), Positives = 60/149 (40%)
Query: 66 GEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSWNV 125
G +P + G +RNGP G + K H W +G G + +F+ DG +
Sbjct: 26 GSVPS-YLTGTMLRNGPGMFTVGEEEYK-------H-WFDGLGFMQRYHFE---DGK--M 71
Query: 126 VYMNRHVESETFKQ--EKQRNRSSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNTNI- 182
Y R++ESE + + E QR + + K+ N+N+
Sbjct: 72 FYSARYLESEAYTKTVEAQRIVAGTFGTLSFPDPCKTIFSKYFSEFMNHSEKH-DNSNVA 130
Query: 183 FEHAG-KFYSVAEN-HMPQEIDIFTLETL 209
F G Y+ E HM +D+ TL+TL
Sbjct: 131 FTPVGDSLYACTETPHM-YRVDLDTLKTL 158
>UNIPROTKB|F1S830 [details] [associations]
symbol:RPE65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071257 "cellular response to electrical stimulus"
evidence=IEA] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0004744
"retinal isomerase activity" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:CU929726 Ensembl:ENSSSCT00000004199
Uniprot:F1S830
Length = 533
Score = 120 (47.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 77/341 (22%), Positives = 132/341 (38%)
Query: 38 VDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFG 97
V+ P ++ F V+ L + L ++ G IP + G +R GP LF ++ +
Sbjct: 5 VEHPAGGYRKLFETVEEL-SSPLTAHVTGRIPL-WLTGSLLRCGPG-LFE--VGSEPFY- 58
Query: 98 SSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEG 154
H++ +G+ +LH FK +G +V Y R + ++ + + R + F
Sbjct: 59 ---HLF-DGQALLHKFDFK---EG--HVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFP 109
Query: 155 DXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD- 213
D R ++ + NI+ +Y+ E + +I+ TLET+ D
Sbjct: 110 DPCKNIFSRFFSYFRGVEVTDN-ALVNIYPVGEDYYACTETNFITKINPETLETIKQVDL 168
Query: 214 -----VNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS 268
VNGA P + G V+I + AD + K ++ +
Sbjct: 169 CNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKQDPISKSEIVVQ 228
Query: 269 -RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIM 317
CS H G+T Y VF++ P+ I+L + L Y E +G+
Sbjct: 229 FPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVW 288
Query: 318 PRYGDADSVKWFD----VEPNCTFHIINCFEDGDEVIVWGC 354
D K+ + P FH IN +ED + +IV C
Sbjct: 289 LHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNEFLIVDLC 329
Score = 65 (27.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + Y I++ K ++ VA+ + +P FHG
Sbjct: 472 FVAHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE--VARAEVEINIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
Score = 46 (21.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 23/93 (24%), Positives = 35/93 (37%)
Query: 415 ETNLSGTKVSMDFPMIN-GGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSF--EEP 471
E SG + + +FP IN Y G Y Y ++ + K K ++ +EP
Sbjct: 406 EVLFSGPRQAFEFPQINYQKYGGKPYTYAYGLGLNHFVPDR--LCKLNVKTKETWVWQEP 463
Query: 472 DNTESEELIKVEYHKFEENIFCTGGAFVPKGRG 504
D+ SE + EE+ V G G
Sbjct: 464 DSYPSEPIFVAHPDALEEDDGVVLSVVVSPGAG 496
>UNIPROTKB|Q28175 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9913 "Bos
taurus" [GO:0031090 "organelle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0052885 "all-trans-retinyl-ester hydrolase,
11-cis retinol forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 EMBL:L11356 EMBL:X66277 IPI:IPI00711777 PIR:A47143
RefSeq:NP_776878.1 UniGene:Bt.108 PDB:3FSN PDB:3KVC PDB:4F2Z
PDB:4F30 PDB:4F3A PDB:4F3D PDBsum:3FSN PDBsum:3KVC PDBsum:4F2Z
PDBsum:4F30 PDBsum:4F3A PDBsum:4F3D ProteinModelPortal:Q28175
DIP:DIP-48993N STRING:Q28175 PRIDE:Q28175
Ensembl:ENSBTAT00000043702 GeneID:282043 KEGG:bta:282043 CTD:6121
InParanoid:Q28175 KO:K11158 BRENDA:5.2.1.7 EvolutionaryTrace:Q28175
NextBio:20805904 Uniprot:Q28175
Length = 533
Score = 119 (46.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 76/341 (22%), Positives = 133/341 (39%)
Query: 38 VDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFG 97
V+ P ++ F V+ L + L ++ G IP + G +R GP LF ++ +
Sbjct: 5 VEHPAGGYKKLFETVEEL-SSPLTAHVTGRIPL-WLTGSLLRCGPG-LFE--VGSEPFY- 58
Query: 98 SSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEG 154
H++ +G+ +LH FK +G +V Y R + ++ + + R + F
Sbjct: 59 ---HLF-DGQALLHKFDFK---EG--HVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFP 109
Query: 155 DXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD- 213
D R ++ + NI+ +Y+ E + +++ TLET+ D
Sbjct: 110 DPCKNIFSRFFSYFRGVEVTDN-ALVNIYPVGEDYYACTETNFITKVNPETLETIKQVDL 168
Query: 214 -----VNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS 268
VNGA P + G V+I + AD + + K ++ +
Sbjct: 169 CNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQ 228
Query: 269 -RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIM 317
CS H G+T Y VF++ P+ I+L + L Y E +G+
Sbjct: 229 FPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVW 288
Query: 318 PRYGDADSVKWFD----VEPNCTFHIINCFEDGDEVIVWGC 354
D K+ + P FH IN +ED + +IV C
Sbjct: 289 LHIADKKRKKYINNKYRTSPFNLFHHINTYEDHEFLIVDLC 329
Score = 65 (27.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + Y I++ K ++ VA+ + +P FHG
Sbjct: 472 FVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE--VARAEVEINIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
Score = 44 (20.5 bits), Expect = 0.00091, Sum P(2) = 0.00090
Identities = 23/93 (24%), Positives = 35/93 (37%)
Query: 415 ETNLSGTKVSMDFPMIN-GGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSF--EEP 471
E SG + + +FP IN Y G Y Y ++ + K K ++ +EP
Sbjct: 406 EVLFSGPRQAFEFPQINYQKYGGKPYTYAYGLGLNHFVPDR--LCKLNVKTKETWVWQEP 463
Query: 472 DNTESEELIKVEYHKFEENIFCTGGAFVPKGRG 504
D+ SE + EE+ V G G
Sbjct: 464 DSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAG 496
>UNIPROTKB|Q16518 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0004744 "retinal isomerase activity" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0042574 "retinal metabolic
process" evidence=IEA] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031090 "organelle membrane" evidence=IEA]
[GO:0006776 "vitamin A metabolic process" evidence=TAS]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 EMBL:CH471059
GO:GO:0007601 Orphanet:791 GO:GO:0050896 GO:GO:0016853 Orphanet:65
GO:GO:0006776 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 Orphanet:180 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:U18991
EMBL:U20510 EMBL:U20476 EMBL:U20477 EMBL:U20478 EMBL:U20479
EMBL:U20481 EMBL:U20482 EMBL:U20484 EMBL:U20485 EMBL:U20486
EMBL:AF039868 EMBL:AF039855 EMBL:AF039856 EMBL:AF039857
EMBL:AF039858 EMBL:AF039859 EMBL:AF039860 EMBL:AF039861
EMBL:AF039862 EMBL:AF039863 EMBL:AF039864 EMBL:AF039865
EMBL:AF039866 EMBL:AF039867 EMBL:AL139413 EMBL:BC075035
EMBL:BC075036 IPI:IPI00029250 RefSeq:NP_000320.1 UniGene:Hs.2133
ProteinModelPortal:Q16518 SMR:Q16518 STRING:Q16518
PhosphoSite:Q16518 DMDM:44888872 PRIDE:Q16518
Ensembl:ENST00000262340 GeneID:6121 KEGG:hsa:6121 UCSC:uc001dei.1
GeneCards:GC01M068894 HGNC:HGNC:10294 MIM:180069 MIM:204100
MIM:613794 neXtProt:NX_Q16518 PharmGKB:PA34655 InParanoid:Q16518
OMA:WLHVADK PhylomeDB:Q16518 BioCyc:MetaCyc:ENSG00000116745-MONOMER
ChiTaRS:RPE65 GenomeRNAi:6121 NextBio:23773 ArrayExpress:Q16518
Bgee:Q16518 CleanEx:HS_RPE65 Genevestigator:Q16518
GermOnline:ENSG00000116745 Uniprot:Q16518
Length = 533
Score = 118 (46.6 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 76/341 (22%), Positives = 132/341 (38%)
Query: 38 VDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFG 97
V+ P ++ F V+ L + L ++ G IP + G +R GP LF ++ +
Sbjct: 5 VEHPAGGYKKLFETVEEL-SSPLTAHVTGRIPL-WLTGSLLRCGPG-LFE--VGSEPFY- 58
Query: 98 SSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEG 154
H++ +G+ +LH FK +G +V Y R + ++ + + R + F
Sbjct: 59 ---HLF-DGQALLHKFDFK---EG--HVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFP 109
Query: 155 DXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD- 213
D R ++ + N++ +Y+ E + +I+ TLET+ D
Sbjct: 110 DPCKNIFSRFFSYFRGVEVTDN-ALVNVYPVGEDYYACTETNFITKINPETLETIKQVDL 168
Query: 214 -----VNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS 268
VNGA P + G V+I + AD + + K ++ +
Sbjct: 169 CNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQ 228
Query: 269 -RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIM 317
CS H G+T Y VF++ P+ I+L + L Y E +G+
Sbjct: 229 FPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVW 288
Query: 318 PRYGDADSVKWFD----VEPNCTFHIINCFEDGDEVIVWGC 354
D K+ + P FH IN +ED +IV C
Sbjct: 289 LHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNGFLIVDLC 329
Score = 65 (27.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + Y I++ K ++ VA+ + +P FHG
Sbjct: 472 FVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE--VARAEVEINIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
Score = 45 (20.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 23/93 (24%), Positives = 35/93 (37%)
Query: 415 ETNLSGTKVSMDFPMIN-GGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSF--EEP 471
E SG + + +FP IN Y G Y Y ++ + K K ++ +EP
Sbjct: 406 EVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGLNHFVPDR--LCKLNVKTKETWVWQEP 463
Query: 472 DNTESEELIKVEYHKFEENIFCTGGAFVPKGRG 504
D+ SE + EE+ V G G
Sbjct: 464 DSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAG 496
>UNIPROTKB|Q9YGX2 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0052884 "all-trans-retinyl-palmitate hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052885
"all-trans-retinyl-ester hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] GO:GO:0005783
GO:GO:0005886 GO:GO:0046872 GO:GO:0007601 GO:GO:0050896
GO:GO:0016853 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AB017594 IPI:IPI00584895
RefSeq:NP_990215.1 UniGene:Gga.408 ProteinModelPortal:Q9YGX2
STRING:Q9YGX2 GeneID:395700 KEGG:gga:395700 InParanoid:Q9YGX2
NextBio:20815770 Uniprot:Q9YGX2
Length = 533
Score = 113 (44.8 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 73/345 (21%), Positives = 130/345 (37%)
Query: 34 MFEFVDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTK 93
M+ V+ P ++ F V+ L V ++ G IP + G +R GP G +
Sbjct: 1 MYSQVEHPAGGYKKLFETVEELSSPV-TAHVTGRIPT-WLRGSLLRCGPGLFEVGAEPFY 58
Query: 94 SMFGSSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLP 150
+F +G+ +LH FK +G +V Y R V ++ + + R + F
Sbjct: 59 HLF--------DGQALLHKFDFK---EG--HVTYHRRFVRTDAYVRAMTEKRIVITEFGT 105
Query: 151 AIEGDXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLG 210
D + ++ + N++ +Y+ E + +I+ TLET+
Sbjct: 106 YAYPDPCKNIFSRFFSYFKGVEVTDN-ALVNVYPVGEDYYACTETNFITKINPDTLETIK 164
Query: 211 NWD------VNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVHKVD 264
D VNGA P + G + I + AD + ++K +
Sbjct: 165 QVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAYNIIRIPPLQADKEDPMNKSE 224
Query: 265 LKLS-RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAK 313
+ + CS H G+T Y VF++ P+ I+L + L Y E
Sbjct: 225 VVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLSSWSLWGANYMDCFESNET 284
Query: 314 IGIMPRYGDADSVKWFDVEPNCT----FHIINCFEDGDEVIVWGC 354
+G+ + + +++ + FH IN FED +IV C
Sbjct: 285 MGVWLHVAEKKKGRLLNIKYRTSAFNLFHHINTFEDNGFLIVDLC 329
Score = 67 (28.6 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + + Y I++ K ++ VA+ + +P FHG
Sbjct: 472 FVSHPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSE--VARAEVEVNIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
Score = 43 (20.2 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 415 ETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSF--EEPD 472
E SG + + +FP IN G K Y YT + + K K ++ +EPD
Sbjct: 406 EVIFSGPRHAFEFPQINYKKYGGK-PYTYTYGLGLNHFVPDRLCKLNVKTKETWVWQEPD 464
Query: 473 NTESEELIKVEYHKFEEN 490
+ SE + EE+
Sbjct: 465 SYPSEPIFVSHPDALEED 482
>UNIPROTKB|F1PXT9 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:WLHVADK EMBL:AAEX03004935
EMBL:AAEX03004936 Ensembl:ENSCAFT00000032537 Uniprot:F1PXT9
Length = 533
Score = 116 (45.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 75/341 (21%), Positives = 134/341 (39%)
Query: 38 VDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFG 97
V+ P ++ F V+ L + L ++ G IP + G +R GP LF ++ +
Sbjct: 5 VEHPAGGYKKLFETVEEL-SSPLTAHVTGRIPL-WLTGSLLRCGPG-LFE--VGSEPFY- 58
Query: 98 SSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEG 154
H++ +G+ +LH FK +G +V Y R + ++ + + R + F
Sbjct: 59 ---HLF-DGQALLHKFDFK---EG--HVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFP 109
Query: 155 DXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD- 213
D R ++ + N++ +Y+ E + +I+ TLET+ D
Sbjct: 110 DPCKNIFSRFFSYFRGVEVTDN-ALVNVYPVGEDYYACTETNFITKINPETLETIKQVDL 168
Query: 214 -----VNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS 268
VNGA P + G V+I + AD + + K ++ +
Sbjct: 169 CNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEVVVQ 228
Query: 269 -RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIM 317
CS H G+T Y VF++ P+ I+L + L Y E +G+
Sbjct: 229 FPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLSSWSLWGANYMDCFESNETMGVW 288
Query: 318 PRYGDADSVKWFDVEPNCT----FHIINCFEDGDEVIVWGC 354
D K+ + + + FH IN +ED + +IV C
Sbjct: 289 LHIADKKRKKYLNNKYRTSSFNLFHHINTYEDNEFLIVDLC 329
Score = 65 (27.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + Y I++ K ++ VA+ + +P FHG
Sbjct: 472 FVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE--VARAEVEINIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
>UNIPROTKB|Q9TVB8 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0031090 "organelle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0052885 "all-trans-retinyl-ester hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] GO:GO:0005783 GO:GO:0005886 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF084537
EMBL:Y16567 EMBL:AJ506754 EMBL:AJ506755 EMBL:AJ506756 EMBL:AJ506757
EMBL:AJ251207 EMBL:AJ506759 RefSeq:NP_001003176.1 UniGene:Cfa.3665
ProteinModelPortal:Q9TVB8 STRING:Q9TVB8 GeneID:403803
KEGG:cfa:403803 InParanoid:Q9TVB8 NextBio:20817300 Uniprot:Q9TVB8
Length = 533
Score = 116 (45.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 75/341 (21%), Positives = 134/341 (39%)
Query: 38 VDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFG 97
V+ P ++ F V+ L + L ++ G IP + G +R GP LF ++ +
Sbjct: 5 VEHPAGGYKKLFETVEEL-SSPLTAHVTGRIPL-WLTGSLLRCGPG-LFE--VGSEPFY- 58
Query: 98 SSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLPAIEG 154
H++ +G+ +LH FK +G +V Y R + ++ + + R + F
Sbjct: 59 ---HLF-DGQALLHKFDFK---EG--HVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFP 109
Query: 155 DXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD- 213
D R ++ + N++ +Y+ E + +I+ TLET+ D
Sbjct: 110 DPCKNIFSRFFSYFRGVEVTDN-ALVNVYPVGEDYYACTETNFITKINPETLETIKQVDL 168
Query: 214 -----VNGAWNRPFTSHPKKASGTGELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS 268
VNGA P + G V+I + AD + + K ++ +
Sbjct: 169 CNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEVVVQ 228
Query: 269 -RCS------LCHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIM 317
CS H G+T Y VF++ P+ I+L + L Y E +G+
Sbjct: 229 FPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLSSWSLWGANYMDCFESNETMGVW 288
Query: 318 PRYGDADSVKWFDVEPNCT----FHIINCFEDGDEVIVWGC 354
D K+ + + + FH IN +ED + +IV C
Sbjct: 289 LHIADKKRKKYLNNKYRTSSFNLFHHINTYEDNEFLIVDLC 329
Score = 65 (27.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + Y I++ K ++ VA+ + +P FHG
Sbjct: 472 FVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE--VARAEVEINIPVTFHGL 529
Query: 556 F 556
F
Sbjct: 530 F 530
>ZFIN|ZDB-GENE-040426-1717 [details] [associations]
symbol:rpe65a "retinal pigment epithelium-specific
protein 65a" species:7955 "Danio rerio" [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
ZFIN:ZDB-GENE-040426-1717 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AY646886 EMBL:FP102801 EMBL:BC059559
IPI:IPI00485811 RefSeq:NP_957045.1 UniGene:Dr.12451
ProteinModelPortal:Q6PBW5 STRING:Q6PBW5 Ensembl:ENSDART00000004533
GeneID:393724 KEGG:dre:393724 CTD:393724 InParanoid:Q6PBW5
OMA:TSMEFPR OrthoDB:EOG47M1XK NextBio:20814725 Bgee:Q6PBW5
GO:GO:0052885 GO:GO:0052884 Uniprot:Q6PBW5
Length = 531
Score = 115 (45.5 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 71/327 (21%), Positives = 127/327 (38%)
Query: 49 FAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEG 108
F + L E + T + G IP F +G +R GP G + +F +G+
Sbjct: 16 FETAEELNEPLPAT-VTGRIPS-FIKGSLLRLGPGLFEAGAEPFYHLF--------DGQA 65
Query: 109 MLHALYFKKETDGSWNVVYMNRHVESETFKQ---EKQRNRSSFLPAIEGDXXXXXXXXXX 165
++H F ++G V Y + V+++ + + EK+ + F D
Sbjct: 66 LMHKFDF---SNGQ--VTYFRKFVKTDAYVRAITEKRVVITEFGTCAYPDPCKNIFSRFF 120
Query: 166 XXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNGAWN-RPFTS 224
+ ++ N++ FY+V E + ++++ TLETL D+ N T+
Sbjct: 121 SYFKGVEVTDNCL-VNVYPIGEDFYAVTETNYITKVNVDTLETLKKVDMCNYVNINGVTA 179
Query: 225 HPK-KASGT----GELVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS-------RCSL 272
HP + GT G + G V I D + K + + + S
Sbjct: 180 HPHIERDGTVYNIGNCMGKGASLAYNIVRIPPTQKDKSDPIEKSKVVVQFPSAERFKPSY 239
Query: 273 CHEIGITQRYNVFLDYPLSIDLTRLAFGGPL--------IKYEHEGYAKIGIMPRY-GDA 323
H G+T+ Y VF++ P+ I+L + + + + E I I ++ G+
Sbjct: 240 VHSFGMTENYFVFVETPVKINLLKFLSAWSIRGSNYMDCFESDEEKGTWIHIARKHPGEY 299
Query: 324 DSVKWFDVEPNCTFHIINCFEDGDEVI 350
K F FH INC+ED ++
Sbjct: 300 IDYK-FRTSAMGLFHHINCYEDSGFIV 325
Score = 60 (26.2 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAF 556
FV GV+EDDG ++T + + +I K E +A+ + P FHG +
Sbjct: 472 FVQTPDGVDEDDGILMTIVVSPGAQRPTYCLILNAKDLSE-IARAEVEILTPVTFHGMY 529
Score = 42 (19.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 415 ETNLSGTKVSMDFPMINGGYTGIKN-KYGY 443
E SG + + +FP IN KN Y Y
Sbjct: 406 EVLFSGPRQAFEFPQINYRMVNGKNYTYAY 435
>UNIPROTKB|F1N3B7 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
OMA:ITENYIV GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:DAAA02046109 EMBL:DAAA02046110 IPI:IPI00702818
Ensembl:ENSBTAT00000048748 Uniprot:F1N3B7
Length = 494
Score = 89 (36.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 46/170 (27%), Positives = 69/170 (40%)
Query: 64 IDGEIPEDFPEGVYIRNGPNPLFGGLKSTKSMFGSSNHIWVEGEGMLHALYFKKETDGSW 123
+ G+IP + +G+ +RNGP G+ + NH W +G +LH+ + DG
Sbjct: 20 VTGKIPA-WLQGILLRNGP-----GMHTVGET--RYNH-WFDGLALLHSFTIR---DGE- 66
Query: 124 NVVYMNRHVESETFKQEKQRNR---SSFLPAIEGDXXXXXXXXXXXXXRFGKINKYISNT 180
V Y ++++ S+T+ + NR S F D I + N
Sbjct: 67 -VYYRSKYLRSDTYTANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSH-TIPDFTDNC 124
Query: 181 --NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWDVNG--AWNRPFTSHP 226
NI FY+ E + I+ TLETL D A N TSHP
Sbjct: 125 LINIMRCGEDFYATTETSYIRRINPQTLETLEKVDFRKYVAVNLA-TSHP 173
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 271 SLCHEIGITQRYNVFLDYPLSIDLTRLAFG-------GPLIKYEHEGYAKIGIMPRYGDA 323
S H G+++ Y +FL+ P +D+ ++A + + E I I+ R
Sbjct: 234 SYYHSFGVSENYIIFLEQPFKLDILKMATAYIRGVSWASCLAFHGEDKTHIHIIDRRTRK 293
Query: 324 DSVKWFDVEPNCTFHIINCFE-DG 346
+ +P FH +N +E DG
Sbjct: 294 PVPTKYHTDPMVVFHHVNAYEEDG 317
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 488 EENIFCTGGAFVPKGRGVEEDDGWIITFLHNEDTNISQVYII 529
EE+ + FVP +EDDG I++ + + D S ++
Sbjct: 450 EEHCWPAEPLFVPTPGAKDEDDGIILSAIVSTDPQKSPFLLV 491
>ZFIN|ZDB-GENE-050410-16 [details] [associations]
symbol:rpe65b "retinal pigment epithelium-specific
protein 65b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
ZFIN:ZDB-GENE-050410-16 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0016787 GeneTree:ENSGT00500000044783 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AY646887
EMBL:CR759968 EMBL:BC133985 EMBL:BC155753 IPI:IPI00851384
RefSeq:NP_001082902.2 UniGene:Dr.79444 ProteinModelPortal:A9C3R9
PRIDE:A9C3R9 DNASU:100002865 Ensembl:ENSDART00000076542
GeneID:100002865 KEGG:dre:100002865 CTD:100002865
BioCyc:MetaCyc:MONOMER-16789 NextBio:20785619 Bgee:A9C3R9
Uniprot:A9C3R9
Length = 532
Score = 90 (36.7 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 61/279 (21%), Positives = 115/279 (41%)
Query: 34 MFEFVDQPLLPSQRNFAPVDALREAVLVTNIDGEIPEDFPEGVYIRNGPNPLFGGLKSTK 93
M ++ P ++ F + L E + ++ G+IP + G +R GP LF +
Sbjct: 1 MVSRLEHPAGGYKKVFESCEELAEPI-PAHVSGKIPA-WLSGSLLRMGPG-LF---EIGD 54
Query: 94 SMFGSSNHIWVEGEGMLHALYFKKETDGSWNVVYMNRHVESETFKQEKQRNR---SSFLP 150
F NH++ +G+ ++H K DG V Y + + ++ + + R +
Sbjct: 55 EPF---NHLF-DGQALIHKFDLK---DG--RVTYHRKFIRTDAYVRAMTEKRVVITELGT 105
Query: 151 AIEGDXXXXXXXXXXXXXRFGKINKYISNTNIFEHAGKFYSVAENHMPQEIDIFTLETLG 210
A D + ++ S NI+ FY+ E + +++ TLET+
Sbjct: 106 AAYPDPCKNIFSRFFTYFQGTEVTDNCS-VNIYPIGEDFYACTETNFITKVNPDTLETIK 164
Query: 211 NWDV-NGAWNRPFTSHPK-KASGT----GELVIMGVDATKPFVEIGVISAD-GDKL-VHK 262
D+ N T+HP +A GT G + V+I + + D L + K
Sbjct: 165 KVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYNIVKIPPLQEEKSDPLAMSK 224
Query: 263 VDLKLS-----RCSLCHEIGITQRYNVFLDYPLSIDLTR 296
V ++ + S H G+T+ + VF++ P+ I+L +
Sbjct: 225 VLVQFPSSERFKPSYVHSFGMTENHFVFVETPVKINLLK 263
Score = 70 (29.7 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 271 SLCHEIGITQRYNVFLDYPLSIDL----TRLAFGGPLIKYEHEGYAKIGIMPRYGDADSV 326
S H G+T+ + VF++ P+ I+L T + G E ++G +
Sbjct: 238 SYVHSFGMTENHFVFVETPVKINLLKFLTSWSIRGSNYMDCFESNDRMGTWFHLAAKNPG 297
Query: 327 KWFDVEPNCT----FHIINCFEDGDEVIVWGC 354
K+ D + + FH INCFED ++V C
Sbjct: 298 KYIDHKFRTSAFNIFHHINCFEDQGFIVVDLC 329
Score = 46 (21.3 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 11/59 (18%), Positives = 25/59 (42%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVYIIDTKKFTDEPVAKITLSHRVPYGFHGAF 556
FV +EDDG +++ + + +++ K +A+ + +P HG +
Sbjct: 472 FVQSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAEVDVLIPLTLHGIY 530
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 415 ETNLSGTKVSMDFPMINGGYTGIKNKYGYT 444
E SG + + +FP IN Y+ K YT
Sbjct: 406 EVLFSGPRQAFEFPQIN--YSKFNGK-DYT 432
>UNIPROTKB|F1P321 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00584895 EMBL:AADN02012423
Ensembl:ENSGALT00000018373 Uniprot:F1P321
Length = 449
Score = 93 (37.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 44/195 (22%), Positives = 76/195 (38%)
Query: 181 NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD------VNGAWNRPFTSHPKKASGTGE 234
N++ +Y+ E + +I+ TLET+ D VNGA P + G
Sbjct: 51 NVYPVGEDYYACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGN 110
Query: 235 LVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS-RCS------LCHEIGITQRYNVFLD 287
+ I + AD + ++K ++ + CS H G+T Y VF++
Sbjct: 111 CFGKNFSLAYNIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVE 170
Query: 288 YPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIMPRYGDADSVKWFDVEPNCT----FHI 339
P+ I+L + L Y E +G+ + + +++ + FH
Sbjct: 171 TPVKINLLKFLSSWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHH 230
Query: 340 INCFEDGDEVIVWGC 354
IN FED +IV C
Sbjct: 231 INTFEDNGFLIVDLC 245
Score = 67 (28.6 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + + Y I++ K ++ VA+ + +P FHG
Sbjct: 388 FVSHPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSE--VARAEVEVNIPVTFHGL 445
Query: 556 F 556
F
Sbjct: 446 F 446
Score = 43 (20.2 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 415 ETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSF--EEPD 472
E SG + + +FP IN G K Y YT + + K K ++ +EPD
Sbjct: 322 EVIFSGPRHAFEFPQINYKKYGGK-PYTYTYGLGLNHFVPDRLCKLNVKTKETWVWQEPD 380
Query: 473 NTESEELIKVEYHKFEEN 490
+ SE + EE+
Sbjct: 381 SYPSEPIFVSHPDALEED 398
>UNIPROTKB|F1NE28 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:AADN02012423 IPI:IPI00821971
Ensembl:ENSGALT00000037886 Uniprot:F1NE28
Length = 458
Score = 93 (37.8 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 44/195 (22%), Positives = 76/195 (38%)
Query: 181 NIFEHAGKFYSVAENHMPQEIDIFTLETLGNWD------VNGAWNRPFTSHPKKASGTGE 234
N++ +Y+ E + +I+ TLET+ D VNGA P + G
Sbjct: 60 NVYPVGEDYYACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGN 119
Query: 235 LVIMGVDATKPFVEIGVISADGDKLVHKVDLKLS-RCS------LCHEIGITQRYNVFLD 287
+ I + AD + ++K ++ + CS H G+T Y VF++
Sbjct: 120 CFGKNFSLAYNIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVE 179
Query: 288 YPLSIDLTRLAFGGPL--IKYEH--EGYAKIGIMPRYGDADSVKWFDVEPNCT----FHI 339
P+ I+L + L Y E +G+ + + +++ + FH
Sbjct: 180 TPVKINLLKFLSSWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHH 239
Query: 340 INCFEDGDEVIVWGC 354
IN FED +IV C
Sbjct: 240 INTFEDNGFLIVDLC 254
Score = 67 (28.6 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 498 FVPKGRGVEEDDGWIITFLHNEDTNISQVY--IIDTKKFTDEPVAKITLSHRVPYGFHGA 555
FV +EEDDG +++ + + + Y I++ K ++ VA+ + +P FHG
Sbjct: 397 FVSHPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSE--VARAEVEVNIPVTFHGL 454
Query: 556 F 556
F
Sbjct: 455 F 455
Score = 43 (20.2 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 415 ETNLSGTKVSMDFPMINGGYTGIKNKYGYTQIVDSIASSASGMPKYGGLAKLSF--EEPD 472
E SG + + +FP IN G K Y YT + + K K ++ +EPD
Sbjct: 331 EVIFSGPRHAFEFPQINYKKYGGK-PYTYTYGLGLNHFVPDRLCKLNVKTKETWVWQEPD 389
Query: 473 NTESEELIKVEYHKFEEN 490
+ SE + EE+
Sbjct: 390 SYPSEPIFVSHPDALEED 407
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.138 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 571 558 0.00099 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 624 (66 KB)
Total size of DFA: 345 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.56u 0.10s 45.66t Elapsed: 00:00:02
Total cpu time: 45.58u 0.10s 45.68t Elapsed: 00:00:02
Start: Mon May 20 17:22:55 2013 End: Mon May 20 17:22:57 2013