Query 008279
Match_columns 571
No_of_seqs 182 out of 1466
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 22:26:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008279.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008279hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 7E-117 2E-121 973.1 51.1 504 63-571 2-507 (547)
2 1iok_A Chaperonin 60; chaperon 100.0 2E-117 6E-122 978.4 43.3 506 62-571 2-509 (545)
3 1we3_A CPN60(groel); chaperoni 100.0 6E-116 2E-120 966.8 55.1 505 63-571 2-509 (543)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-117 4E-122 977.1 41.2 503 62-571 1-505 (546)
5 3p9d_C T-complex protein 1 sub 100.0 1.2E-98 4E-103 833.8 39.2 473 63-571 11-570 (590)
6 3ko1_A Chaperonin; 9-fold symm 100.0 8.1E-96 3E-100 808.6 49.0 443 63-571 22-517 (553)
7 3p9d_A T-complex protein 1 sub 100.0 8.3E-97 3E-101 818.0 39.7 448 63-571 16-532 (559)
8 3iyg_B T-complex protein 1 sub 100.0 1.3E-95 4E-100 802.2 48.7 441 64-571 3-495 (513)
9 3ruv_A Chaperonin, CPN; double 100.0 1.2E-95 4E-100 806.9 47.8 443 63-571 11-503 (543)
10 3iyg_H T-complex protein 1 sub 100.0 2.6E-95 9E-100 799.5 48.2 439 72-571 10-498 (515)
11 1q3q_A Thermosome alpha subuni 100.0 3.1E-95 1.1E-99 804.4 47.0 443 63-571 15-509 (548)
12 1a6d_B Thermosome (beta subuni 100.0 8.8E-95 3E-99 800.5 49.1 443 63-571 13-507 (543)
13 3p9d_D T-complex protein 1 sub 100.0 3.5E-96 1E-100 808.7 37.7 447 63-571 11-512 (528)
14 1a6d_A Thermosome (alpha subun 100.0 7.7E-95 2.6E-99 800.8 45.7 442 63-571 14-506 (545)
15 3iyg_A T-complex protein 1 sub 100.0 2.1E-94 7.1E-99 795.3 47.4 446 65-571 4-512 (529)
16 3iyg_E T-complex protein 1 sub 100.0 4.2E-94 1.4E-98 791.0 49.0 442 64-571 3-499 (515)
17 3iyg_D T-complex protein 1 sub 100.0 9E-94 3.1E-98 788.4 47.5 439 67-571 7-502 (518)
18 3p9d_B T-complex protein 1 sub 100.0 5.8E-95 2E-99 799.9 34.4 442 63-571 9-502 (527)
19 3p9d_E T-complex protein 1 sub 100.0 6.6E-94 2.3E-98 795.3 42.5 448 64-571 38-542 (562)
20 3iyg_G T-complex protein 1 sub 100.0 4.4E-93 1.5E-97 782.4 48.1 436 72-571 8-498 (515)
21 3p9d_G T-complex protein 1 sub 100.0 7.4E-95 2.5E-99 801.1 33.8 444 64-571 17-511 (550)
22 3iyg_Q T-complex protein 1 sub 100.0 1.5E-92 5E-97 778.2 47.1 435 72-571 10-496 (512)
23 3iyg_Z T-complex protein 1 sub 100.0 4.1E-92 1.4E-96 774.5 45.6 439 66-571 5-501 (517)
24 3p9d_H T-complex protein 1 sub 100.0 9E-92 3.1E-96 779.1 36.9 436 72-571 25-532 (568)
25 3p9d_F T-complex protein 1 sub 100.0 1.1E-91 3.8E-96 776.2 32.3 441 65-571 11-521 (546)
26 3aq1_B Thermosome subunit; gro 100.0 1.2E-85 4.3E-90 720.8 41.2 407 101-571 1-460 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.7E-46 5.8E-51 351.6 16.8 193 248-440 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 3.7E-45 1.3E-49 343.0 17.5 189 251-439 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 5.1E-35 1.8E-39 262.0 14.8 144 253-396 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 6.4E-22 2.2E-26 188.0 14.4 146 244-448 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 2E-18 6.7E-23 160.9 13.8 126 251-399 1-153 (159)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=6.6e-117 Score=973.11 Aligned_cols=504 Identities=55% Similarity=0.838 Sum_probs=491.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+|+|.|| .++|+.++.||..|+++|+|||||+||||||++++|+|+|||||+||+|+|+++||+||+||+|++++|++
T Consensus 2 ~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 79 (547)
T 1kp8_A 2 AKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASK 79 (547)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHh
Confidence 6999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCCchHHHH
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls~ 221 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++++++|++
T Consensus 80 qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~ 159 (547)
T 1kp8_A 80 ANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGK 159 (547)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHH
T ss_pred hccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999877 999999999999999999
Q ss_pred HHHHHHHhhccCCceEEecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeecccCCCHHHHHHHHHHH
Q 008279 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (571)
Q Consensus 222 li~~Av~~v~~~g~I~i~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~~~~~l~~~le~i 301 (571)
|+++|+.+++++|.|++++|++++|++++++||+|+++|.||||++++++|+++++||+||++|++|+++++++++++++
T Consensus 160 liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i 239 (547)
T 1kp8_A 160 LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV 239 (547)
T ss_dssp HHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHH
T ss_pred HHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceee
Q 008279 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (571)
Q Consensus 302 ~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~ 381 (571)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++.+|+|||++|||++++++.|++++++++++||+|
T Consensus 240 ~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a 319 (547)
T 1kp8_A 240 AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQA 319 (547)
T ss_dssp HGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEE
T ss_pred HhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHH
Q 008279 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (571)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl 461 (571)
+.|++++++|++|++|+++..++.|++||+.+++.++++|+||+|+||+++|++++|||+|||+|+.+++|+||+++|||
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl 399 (547)
T 1kp8_A 320 KRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL 399 (547)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccchhHhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 008279 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (571)
Q Consensus 462 ~~~r~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~~~~~G 541 (571)
|++|+++++|+|||||++|++++.+|++++. .++. +++++++|++||+.||++||+|||+|+.+++++|++. +.++|
T Consensus 400 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G 476 (547)
T 1kp8_A 400 HATRAAVEEGVVAGGGVALIRVASKLADLRG-QNAD-QNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYG 476 (547)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEE
T ss_pred HHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEe
Confidence 9999999999999999999999999998875 5454 5599999999999999999999999999999999865 57899
Q ss_pred EEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 542 YNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 542 id~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 477 ~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~ 507 (547)
T 1kp8_A 477 YNAATEEYGNMIDMGILDPTKVTRSALQYAA 507 (547)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred EeCCCCccccchhcCceechHhHHHHHHHHH
Confidence 99999999999999999999999 9999983
No 2
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.7e-117 Score=978.40 Aligned_cols=506 Identities=52% Similarity=0.831 Sum_probs=450.9
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHH
Q 008279 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (571)
Q Consensus 62 ~~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (571)
|+|+|.|| .++|+.++.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+||+||+|++++|+
T Consensus 2 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~ 79 (545)
T 1iok_A 2 AAKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVAS 79 (545)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred Cchhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHH
Confidence 38999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCCchHHH
Q 008279 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (571)
Q Consensus 142 ~q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (571)
+||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++++++|+
T Consensus 80 ~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~ 159 (545)
T 1iok_A 80 RTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIG 159 (545)
T ss_dssp HGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHH
T ss_pred hhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEEecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeecccCCCHHHHHHHHHH
Q 008279 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (571)
Q Consensus 221 ~li~~Av~~v~~~g~I~i~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~~~~~l~~~le~ 300 (571)
+++++|+.+++++|.|++++|++++|++++++|++|+++|.||||++++++|+++++||+||++|++|++++++++++++
T Consensus 160 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~ 239 (545)
T 1iok_A 160 QQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES 239 (545)
T ss_dssp HHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------
T ss_pred HHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCcee
Q 008279 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (571)
Q Consensus 301 i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~ 380 (571)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++.+|+|||++|||++++++.|++++++++++||+
T Consensus 240 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~ 319 (545)
T 1iok_A 240 VIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR 319 (545)
T ss_dssp ----CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHH
Q 008279 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (571)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DA 460 (571)
|++|++++++|++|++|+++..+++|++|++.+++.++++|++++|+||+++|++++|||+|||+|+.+++|+||+++||
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DA 399 (545)
T 1iok_A 320 AKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDA 399 (545)
T ss_dssp EEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccchhHhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCce
Q 008279 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 540 (571)
Q Consensus 461 l~~~r~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~~~~~ 540 (571)
||++|+++++|+|||||++|++++.+|++++. .++. +++++++|++||+.||++||+|||+|+.+++++|++.|++++
T Consensus 400 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~ 477 (545)
T 1iok_A 400 LNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSD-QDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAF 477 (545)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHH-HHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTE
T ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCe
Confidence 99999999999999999999999999998875 5554 459999999999999999999999999999999987767789
Q ss_pred eEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 541 GYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 541 Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
|||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 478 G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (545)
T 1iok_A 478 GFNAQTEEYGDMFKFGVIDPAKVVRTALEDAA 509 (545)
T ss_dssp EEETTTTEEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred eEeCCCCcccchHhcCcEEccHHHHHHHHHHH
Confidence 999999999999999999999999 9999883
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.6e-116 Score=966.80 Aligned_cols=505 Identities=56% Similarity=0.861 Sum_probs=492.1
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+|+|.|| .++|+.++.||..|+++|+|||||+||||||++++|+|+|||||+||+|+|+++||+||+||+|++++|++
T Consensus 2 ~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 79 (543)
T 1we3_A 2 AKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASK 79 (543)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCCchHHHH
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls~ 221 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++ +++|++
T Consensus 80 qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~ 158 (543)
T 1we3_A 80 TNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGK 158 (543)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHH
T ss_pred hheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999877 99999999998 899999
Q ss_pred HHHHHHHhhccCCceEEecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeecccCCCHHHHHHHHHHH
Q 008279 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (571)
Q Consensus 222 li~~Av~~v~~~g~I~i~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~~~~~l~~~le~i 301 (571)
|+++|+.+++++|.|++++|++++|++++++|++|+++|.||||++++++|+++++||+|+++|++|+++++++++++++
T Consensus 159 li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i 238 (543)
T 1we3_A 159 LIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQV 238 (543)
T ss_dssp HHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceee
Q 008279 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (571)
Q Consensus 302 ~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~ 381 (571)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++.+|+|||++|||++++++.|++++++++++||+|
T Consensus 239 ~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a 318 (543)
T 1we3_A 239 AQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRA 318 (543)
T ss_dssp HTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEE
T ss_pred HhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHH
Q 008279 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (571)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl 461 (571)
+.|+++++++++|++|+++..+..|+++|+.+++.++++|++++|+||+++|++++|||+|||+|+.+++|+||+++|||
T Consensus 319 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl 398 (543)
T 1we3_A 319 ERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDAL 398 (543)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccchhHhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-CCce
Q 008279 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-NHKY 540 (571)
Q Consensus 462 ~~~r~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~-~~~~ 540 (571)
|++|+++++|+|||||++|++++.+|++++.+.++.+ ++++++|++||+.||++||+|||+|+.+++.+|++.| +.++
T Consensus 399 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~ 477 (543)
T 1we3_A 399 NATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDE-ATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRY 477 (543)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTE
T ss_pred HHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCE
Confidence 9999999999999999999999999999987666655 5899999999999999999999999999999998753 4689
Q ss_pred eEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 541 GYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 541 Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
|||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 478 G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (543)
T 1we3_A 478 GFNAATGEFVDMVEAGIVDPAKVTRSALQNAA 509 (543)
T ss_dssp EEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred EEeCCCCeecccccCCcCccHHHHHHHHHHHH
Confidence 999999999999999999999999 9999883
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.1e-117 Score=977.08 Aligned_cols=503 Identities=56% Similarity=0.831 Sum_probs=420.9
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHH
Q 008279 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (571)
Q Consensus 62 ~~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (571)
|+|+|.|| +++|+.++.|+..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||++|+||||++++|+
T Consensus 1 ~~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~ 78 (546)
T 3rtk_A 1 MAKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK 78 (546)
T ss_dssp --------------------------------------------------------------CCCHHHHHHHHHHHHHHT
T ss_pred CCceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHH
Confidence 47999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCCchHHH
Q 008279 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (571)
Q Consensus 142 ~q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (571)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++ +++++
T Consensus 79 ~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~ 157 (546)
T 3rtk_A 79 KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIG 157 (546)
T ss_dssp SCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987 99999999998 88999
Q ss_pred HHHHHHHHhhccCCceEEecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeecccCCCHHHHHHHHHH
Q 008279 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (571)
Q Consensus 221 ~li~~Av~~v~~~g~I~i~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~~~~~l~~~le~ 300 (571)
+++++|+.+++++|.|+++.+++..+.+++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~ 237 (546)
T 3rtk_A 158 DLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK 237 (546)
T ss_dssp HHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH
T ss_pred HHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH
Confidence 99999999999999999988877664459999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCcee
Q 008279 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (571)
Q Consensus 301 i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~ 380 (571)
+.+.|+|||||+++|+++||++|+.|+++|+++++|||+|+||+.++.+|+|||++|||++++++.|++++++++++||+
T Consensus 238 I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~ 317 (546)
T 3rtk_A 238 VIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK 317 (546)
T ss_dssp HHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHH
Q 008279 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (571)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DA 460 (571)
|++|++++++|++|++|++++.+..|++||+.+++.++++||+++|+||+++|+|++|||+|||+|+.+++|+||+++||
T Consensus 318 a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DA 397 (546)
T 3rtk_A 318 ARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDA 397 (546)
T ss_dssp EEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccchhHhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCce
Q 008279 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 540 (571)
Q Consensus 461 l~~~r~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~~~~~ 540 (571)
||++|+++++|+|||||++|++++.+|++++ +++.+ ++++++|++||+.||++||+|||+|+.+++++|++. ...+
T Consensus 398 l~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~ 473 (546)
T 3rtk_A 398 VRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDE-ATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGH 473 (546)
T ss_dssp HHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTH-HHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTE
T ss_pred HHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCE
Confidence 9999999999999999999999999999886 55655 489999999999999999999999999999999875 4569
Q ss_pred eEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 541 GYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 541 Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
|||+.+|+|.||++.|||||+.|| ++|++|+
T Consensus 474 G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~ 505 (546)
T 3rtk_A 474 GLNAQTGVYEDLLAAGVADPVKVTRSALQNAA 505 (546)
T ss_dssp ECCSSSCCCEETTTTTCEEEHHHHHHHHHHHH
T ss_pred eEcCCCCcEeeHHHcCCEecHHHHHHHHHHHH
Confidence 999999999999999999999999 9999873
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.2e-98 Score=833.83 Aligned_cols=473 Identities=19% Similarity=0.291 Sum_probs=405.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+.+-.+| .++|..++.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~ 84 (590)
T 3p9d_C 11 SQERTTG--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRT 84 (590)
T ss_dssp TCCBCTT--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTT
T ss_pred CcchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHh
Confidence 4456778 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcC----
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKV-VAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG---- 214 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~l-i~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~---- 214 (571)
||+++||||||+||||++||+++.++ +.+|+||+.|++||++|++.++++|+++++|++. . .|.++|+||++
T Consensus 85 qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~ 164 (590)
T 3p9d_C 85 QDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYV 164 (590)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTT
T ss_pred hhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999 9999999999999999999999999999999874 3 89999998854
Q ss_pred --CchHHHHHHHHHHHhhccCCc----------------eEE--ecCCccccceeeeeeeEEeecccCCccccCcccCee
Q 008279 215 --NNYEVGNMIAEAMSKVGRKGV----------------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 274 (571)
Q Consensus 215 --~~~~ls~li~~Av~~v~~~g~----------------I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~ 274 (571)
++++|++|+++|+.++++++. |++ .+|+++.|+ ++++||+|++++.+| +|++
T Consensus 165 ~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~ 236 (590)
T 3p9d_C 165 IHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSR 236 (590)
T ss_dssp GGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCS
T ss_pred cccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcc
Confidence 478999999999999987642 222 479999998 999999999998776 4788
Q ss_pred eecceeEeeeccc-------------CCCHHHHHHHH-----------HHHHHcCCCeEEEcccccHHHHHHHHHhhhcc
Q 008279 275 EYENCKLLLVDKK-------------ITNARDLINVL-----------EDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (571)
Q Consensus 275 ~~~n~kIll~d~~-------------i~~~~~l~~~l-----------e~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g 330 (571)
+++||+|+++|++ +++++++.+++ +++.+.|++|||++++|+++|+++|..++
T Consensus 237 ~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~--- 313 (590)
T 3p9d_C 237 HIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG--- 313 (590)
T ss_dssp CEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT---
T ss_pred eeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc---
Confidence 9999999999995 35566665544 68889999999999999999999999874
Q ss_pred cceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCcee-eeEEE---EecceEEEEcCCCChhh----
Q 008279 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDA---- 402 (571)
Q Consensus 331 ~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~-~~~v~---i~~~~~~~i~~~~~~~~---- 402 (571)
|+ .|+++++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|++|++|+++..
T Consensus 314 ---I~-----av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~ 380 (590)
T 3p9d_C 314 ---CS-----VLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGW 380 (590)
T ss_dssp ---CC-----CCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC----------
T ss_pred ---ce-----eeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccc
Confidence 33 56789999999999999999998 589999999999 99996 57899999999999888
Q ss_pred ----------------------HHHHHHHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHH
Q 008279 403 ----------------------VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (571)
Q Consensus 403 ----------------------i~~ri~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DA 460 (571)
++.|+++|+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||+++||
T Consensus 381 ~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DA 455 (590)
T 3p9d_C 381 SHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDA 455 (590)
T ss_dssp ----------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHH
T ss_pred cccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999865 4789999999999999999999999999999
Q ss_pred HHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---C
Q 008279 461 LNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---D 536 (571)
Q Consensus 461 l~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~---~ 536 (571)
||++|+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +
T Consensus 456 l~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~ 534 (590)
T 3p9d_C 456 MAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG 534 (590)
T ss_dssp HHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 99999999995 9999999999999999999888877765 89999999999999999999999999999999875 3
Q ss_pred CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 537 NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 537 ~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
++++|||+.+|+|.||++.|||||+.|| ++|++|+
T Consensus 535 ~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 570 (590)
T 3p9d_C 535 NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAI 570 (590)
T ss_dssp CTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHH
T ss_pred CCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHH
Confidence 5689999999999999999999999999 9999883
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=8.1e-96 Score=808.56 Aligned_cols=443 Identities=22% Similarity=0.384 Sum_probs=406.2
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+.+..|| .++|..++.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 22 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 95 (553)
T 3ko1_A 22 GSSRTYG--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKG 95 (553)
T ss_dssp ------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHT
T ss_pred Ccccchh--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhC
Confidence 3556678 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC----
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~ 175 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVA 175 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCC
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999987 55 899999999875
Q ss_pred --chHHHHHHHHHHHhhccC--Cc-------eEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEe
Q 008279 216 --NYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (571)
Q Consensus 216 --~~~ls~li~~Av~~v~~~--g~-------I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIl 282 (571)
+++|++|+++|+.+++++ |. |+++ +|+++.|+ ++++||+|+++|.|||| +++++||+|+
T Consensus 176 ~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 247 (553)
T 3ko1_A 176 GAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPGM-------PKRLENAKIA 247 (553)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTTS-------CSCCBSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCCC-------ccccccceEE
Confidence 789999999999999875 65 6664 78899888 99999999999999974 5678999999
Q ss_pred eeccc-------------CCCHHH-----------HHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeec
Q 008279 283 LVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (571)
Q Consensus 283 l~d~~-------------i~~~~~-----------l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk 338 (571)
++|++ |+++++ +.++++++.+.|+||||++++|+++++++|..+ ++++|+
T Consensus 248 l~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~ 321 (553)
T 3ko1_A 248 LIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVR 321 (553)
T ss_dssp EECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEEC
T ss_pred EecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhh
Confidence 99994 677776 456789999999999999999999999999865 456665
Q ss_pred cCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHH
Q 008279 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (571)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~ 415 (571)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|+++
T Consensus 322 -----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~--------------- 376 (553)
T 3ko1_A 322 -----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP--------------- 376 (553)
T ss_dssp -----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS---------------
T ss_pred -----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC---------------
Confidence 66799999999999999999 5899999999999999865 8899999999764
Q ss_pred hhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcC
Q 008279 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (571)
Q Consensus 416 ~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~ 494 (571)
..|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++.++
T Consensus 377 --------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 436 (553)
T 3ko1_A 377 --------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQV 436 (553)
T ss_dssp --------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHH
T ss_pred --------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhcccc
Confidence 478999999999999999999999999999999999 99999999999999999998877
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C-CceeEEcCCCcccchhhcCcccchhHH-HHHHh
Q 008279 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N-HKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAI 569 (571)
Q Consensus 495 ~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~-~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~ 569 (571)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| + +++|||+.+|++.||++.|||||+.|| ++|++
T Consensus 437 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 515 (553)
T 3ko1_A 437 GGKEQ-LAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKA 515 (553)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHH
T ss_pred CChhH-hHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhh
Confidence 77766 899999999999999999999999999999998764 2 579999999999999999999999999 99998
Q ss_pred cC
Q 008279 570 AL 571 (571)
Q Consensus 570 A~ 571 (571)
|.
T Consensus 516 A~ 517 (553)
T 3ko1_A 516 AT 517 (553)
T ss_dssp HH
T ss_pred cc
Confidence 73
No 7
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=8.3e-97 Score=818.05 Aligned_cols=448 Identities=23% Similarity=0.343 Sum_probs=412.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+|+..|| .++|..++.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 7899999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-cccccCc--h-HHHHHHHhhcCC---
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVED--S-ELADVAAVSAGN--- 215 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~-~L~~va~ts~~~--- 215 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++. . +|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999885 3 899999999875
Q ss_pred ---chHHHHHHHHHHHhhcc-----CCc-----eEE--ecCCccccceeeeeeeEEeecccCCccccCcccCeeeec--c
Q 008279 216 ---NYEVGNMIAEAMSKVGR-----KGV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE--N 278 (571)
Q Consensus 216 ---~~~ls~li~~Av~~v~~-----~g~-----I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~--n 278 (571)
+++|++|+++|+.++++ ++. |++ .+|++++|+ ++++||+|+++|.|||| +++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m-------~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM-------PKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS-------CSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCCc-------ceeeccCC
Confidence 79999999999999984 243 333 359999998 99999999999999984 56788 9
Q ss_pred eeEeeecccC-------------CCHHH-----------HHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhccccee
Q 008279 279 CKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKI 334 (571)
Q Consensus 279 ~kIll~d~~i-------------~~~~~-----------l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i 334 (571)
|+|+++|++| +++++ +.++++++.+.|+||||++++|+++|+++|+.|+ |
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------I 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------C
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------C
Confidence 9999999986 34433 6788999999999999999999999999999985 4
Q ss_pred eeeccCCccCcchhhHHHHHHHhCCeEeecccCccc-cCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHH
Q 008279 335 AALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQI 410 (571)
Q Consensus 335 ~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~-~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l 410 (571)
+||+ ++++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|++|++|++
T Consensus 316 ~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------- 379 (559)
T 3p9d_A 316 MGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK----------- 379 (559)
T ss_dssp EEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------
T ss_pred ceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------
Confidence 6654 778999999999999999998766655 889999999999998 57899999999875
Q ss_pred HHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHH
Q 008279 411 RTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDA 489 (571)
Q Consensus 411 ~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~ 489 (571)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++
T Consensus 380 ------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 380 ------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp ------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred ------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999999 999999999999999999
Q ss_pred HhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CC------------ceeEEcCCCcccchhh
Q 008279 490 IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NH------------KYGYNAATGNYEDLMA 554 (571)
Q Consensus 490 ~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~------------~~Gid~~~~~i~d~~~ 554 (571)
++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| +. ++|||+.+|++.||++
T Consensus 436 ~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~ 514 (559)
T 3p9d_A 436 FATTVGSREQ-LAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIH 514 (559)
T ss_dssp HHTTSCTTHH-HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTT
T ss_pred HhcccChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhh
Confidence 9888877766 899999999999999999999999999999998753 33 7999999999999999
Q ss_pred cCcccchhHH-HHHHhcC
Q 008279 555 AGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 555 ~gI~Dp~~vk-~~l~~A~ 571 (571)
.|||||+.|| ++|++|+
T Consensus 515 ~gI~dp~~vk~~al~~A~ 532 (559)
T 3p9d_A 515 AGVLEPTISKVKSLKSAL 532 (559)
T ss_dssp SSCCEEHHHHHHHHHHHH
T ss_pred ccCEecHHHHHHHHHHHH
Confidence 9999999999 9999873
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.3e-95 Score=802.15 Aligned_cols=441 Identities=22% Similarity=0.311 Sum_probs=407.3
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHH
Q 008279 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (571)
Q Consensus 64 k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (571)
.+-.|| .++|..++.||..|+++|+|||||+||||||++++ |+|+|||||+||||+|+++||. |+|++++|+
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~ 76 (513)
T 3iyg_B 3 ADEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSR 76 (513)
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHH
Confidence 345678 99999999999999999999999999999999999 9999999999999999999997 999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC-----ch-HHHHHHHhhcC-
Q 008279 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG- 214 (571)
Q Consensus 142 ~q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~L~~va~ts~~- 214 (571)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||++
T Consensus 77 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslss 156 (513)
T 3iyg_B 77 VQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSS 156 (513)
T ss_pred HhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999987 34 89999998764
Q ss_pred -----CchHHHHHHHHHHHhhccC---CceEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeee
Q 008279 215 -----NNYEVGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (571)
Q Consensus 215 -----~~~~ls~li~~Av~~v~~~---g~I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~ 284 (571)
++++|++|+++|+.+++++ +.|+++ +|+++.|+ ++++||+|+++|.+| |+++++||+|+++
T Consensus 157 K~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~ 227 (513)
T 3iyg_B 157 KLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIA 227 (513)
T ss_pred cccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEE
Confidence 5689999999999999987 777764 69999998 999999999999876 6778999999999
Q ss_pred cc--------------cCCCHHHHHH-----------HHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeecc
Q 008279 285 DK--------------KITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (571)
Q Consensus 285 d~--------------~i~~~~~l~~-----------~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~ 339 (571)
|+ .+++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||++
T Consensus 228 ~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~ 301 (513)
T 3iyg_B 228 NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEH 301 (513)
T ss_pred cCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEec
Confidence 98 3567777654 689999999999999999999999999875 6899998
Q ss_pred CCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 008279 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (571)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~ 416 (571)
|+ +.+|+|||++|||++++ +++++++++||+|++|+ ++++++++|++|++
T Consensus 302 ~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 354 (513)
T 3iyg_B 302 AD-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL----------------- 354 (513)
T ss_pred CC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC-----------------
Confidence 87 46899999999999999 68999999999999997 57889999999865
Q ss_pred hhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCC
Q 008279 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (571)
Q Consensus 417 ~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~ 495 (571)
+++|||+|||+|+++++|+||+++||+|++|++++++ +|||||++|++++++|++++.+.+
T Consensus 355 ------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 416 (513)
T 3iyg_B 355 ------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTP 416 (513)
T ss_pred ------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccC
Confidence 3589999999999999999999999999999999995 999999999999999999988777
Q ss_pred chhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 496 ~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
+.+| +++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.|| ++|++|.
T Consensus 417 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 495 (513)
T 3iyg_B 417 GKEA-VAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAA 495 (513)
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHH
Confidence 7765 899999999999999999999999999999998753 5689999999999999999999999999 9999883
No 9
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.2e-95 Score=806.89 Aligned_cols=443 Identities=26% Similarity=0.385 Sum_probs=408.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+.+-.+| .++|..++.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 84 (543)
T 3ruv_A 11 NMKRYMG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKT 84 (543)
T ss_dssp SEEEEET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHH
T ss_pred Ccchhcc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHH
Confidence 3455677 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC----
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~ 164 (543)
T 3ruv_A 85 QEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAE 164 (543)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGG
T ss_pred HHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999987 55 899999999764
Q ss_pred --chHHHHHHHHHHHhhccC-Cc-----eEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeec
Q 008279 216 --NYEVGNMIAEAMSKVGRK-GV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 285 (571)
Q Consensus 216 --~~~ls~li~~Av~~v~~~-g~-----I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d 285 (571)
+++|++|+++|+.+++++ |. |+++ +|+++.|+ ++++|++|+++|.|||| +++++||+|+++|
T Consensus 165 ~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~ 236 (543)
T 3ruv_A 165 KAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQM-------PKKVTDAKIALLN 236 (543)
T ss_dssp GCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTTS-------CSEEEEEEEEEES
T ss_pred hhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCccc-------cccccCcEEEEEc
Confidence 789999999999999887 64 6664 78899888 99999999999999974 5689999999999
Q ss_pred cc-------------CCCHHH-----------HHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCC
Q 008279 286 KK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPG 341 (571)
Q Consensus 286 ~~-------------i~~~~~-----------l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~ 341 (571)
++ |+++++ +.++++++.+.|+||||++++|+++++++|..+ ++++|+
T Consensus 237 ~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~--- 307 (543)
T 3ruv_A 237 CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR--- 307 (543)
T ss_dssp SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC---
T ss_pred ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe---
Confidence 95 566655 567789999999999999999999999999864 456665
Q ss_pred ccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHHhhh
Q 008279 342 FGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAE 418 (571)
Q Consensus 342 ~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~ 418 (571)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 308 --~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------ 362 (543)
T 3ruv_A 308 --RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------------ 362 (543)
T ss_dssp --SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC------------------
T ss_pred --eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC------------------
Confidence 66799999999999999999 5899999999999999865 8899999999764
Q ss_pred cHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCCch
Q 008279 419 QDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDND 497 (571)
Q Consensus 419 ~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~ 497 (571)
..|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.
T Consensus 363 -----------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 425 (543)
T 3ruv_A 363 -----------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGR 425 (543)
T ss_dssp -----------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTT
T ss_pred -----------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChH
Confidence 378999999999999999999999999999999999 99999999999999999998888777
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 498 EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 498 e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~----~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 426 eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 503 (543)
T 3ruv_A 426 EQ-LAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAA 503 (543)
T ss_dssp HH-HHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHH
Confidence 66 899999999999999999999999999999998754 3689999999999999999999999999 9999873
No 10
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-95 Score=799.54 Aligned_cols=439 Identities=20% Similarity=0.306 Sum_probs=402.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcccccCCcc
Q 008279 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (571)
Q Consensus 72 ~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~~~~GDGT 151 (571)
.+++..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC--c----h-HHHHHHHhhcC------CchH
Q 008279 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--D----S-ELADVAAVSAG------NNYE 218 (571)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~-~L~~va~ts~~------~~~~ 218 (571)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + . .|.++|+||++ ++++
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999984 4 3 67999998764 5789
Q ss_pred HHHHHHHHHHhhccC---CceEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeeccc------
Q 008279 219 VGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (571)
Q Consensus 219 ls~li~~Av~~v~~~---g~I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~------ 287 (571)
|++|+++|+.+++.+ +.|+++ +|+++.|+ ++++||+|+++|.||||.++ |.+++||+|+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~----p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQ----PKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccC----CccccccEEEEEccccccccc
Confidence 999999999999876 667664 68899998 99999999999999998654 448999999999995
Q ss_pred -------CCCHHHH-----------HHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhh
Q 008279 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (571)
Q Consensus 288 -------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~ 349 (571)
+++++++ .++++++.+.|+||||++++|++.++++|..+ ++++ ++++++.+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~------gI~~-----v~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR------DMFC-----AGRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc------CCcc-----cccccHHH
Confidence 6777776 56689999999999999999999888777543 3444 45788999
Q ss_pred HHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHH
Q 008279 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (571)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l 426 (571)
|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------- 358 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------------- 358 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------------
Confidence 99999999999999 5899999999999999864 7899999998764
Q ss_pred HHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCCchhhHHHHHH
Q 008279 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (571)
Q Consensus 427 ~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~ 505 (571)
..|||+|||+|+++++|+||+++||||++|++++++ +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 359 ---------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 428 (515)
T 3iyg_H 359 ---------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGA 428 (515)
T ss_pred ---------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHH
Confidence 479999999999999999999999999999999995 9999999999999999999888877766 89999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 506 ~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 498 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAAS 498 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHH
Confidence 9999999999999999999999999998754 4579999999999999999999999999 9999884
No 11
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=3.1e-95 Score=804.40 Aligned_cols=443 Identities=25% Similarity=0.374 Sum_probs=413.0
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
++++.|| +++|..++.|+..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 15 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 88 (548)
T 1q3q_A 15 GTQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKT 88 (548)
T ss_dssp TCEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred Ccceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 5778899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcC-----
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~----- 214 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+|+++
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~ 168 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAE 168 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 4 89999998753
Q ss_pred -CchHHHHHHHHHHHhhccC--C-------ceEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEe
Q 008279 215 -NNYEVGNMIAEAMSKVGRK--G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (571)
Q Consensus 215 -~~~~ls~li~~Av~~v~~~--g-------~I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIl 282 (571)
++++|++|+++|+.+++++ | .|+++ +|++++|+ ++++|++|+++|.|||| +++++||+|+
T Consensus 169 ~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 240 (548)
T 1q3q_A 169 SHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIA 240 (548)
T ss_dssp GGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEE
T ss_pred cchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEE
Confidence 4689999999999999876 4 67775 99999999 99999999999999985 4578999999
Q ss_pred eeccc-------------CCCHHHH-----------HHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeec
Q 008279 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (571)
Q Consensus 283 l~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk 338 (571)
++|++ +++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||+
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~ 314 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR 314 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc
Confidence 99998 7788876 788999999999999999999999999999874 67774
Q ss_pred cCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHH
Q 008279 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (571)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~ 415 (571)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 315 -----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 369 (548)
T 1q3q_A 315 -----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP--------------- 369 (548)
T ss_dssp -----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC---------------
T ss_pred -----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC---------------
Confidence 78899999999999999998 6899999999999999865 8899999998753
Q ss_pred hhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcC
Q 008279 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (571)
Q Consensus 416 ~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~ 494 (571)
++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|++++.+.
T Consensus 370 --------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~ 429 (548)
T 1q3q_A 370 --------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQV 429 (548)
T ss_dssp --------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred --------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhc
Confidence 589999999999999999999999999999999999 99999999999999999998777
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHHHhc
Q 008279 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIA 570 (571)
Q Consensus 495 ~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A 570 (571)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.|| ++|++|
T Consensus 430 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A 508 (548)
T 1q3q_A 430 GGKEA-LAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSA 508 (548)
T ss_dssp CHHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHH
T ss_pred CCcHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHH
Confidence 77655 899999999999999999999999999999998653 4589999999999999999999999999 999998
Q ss_pred C
Q 008279 571 L 571 (571)
Q Consensus 571 ~ 571 (571)
+
T Consensus 509 ~ 509 (548)
T 1q3q_A 509 S 509 (548)
T ss_dssp H
T ss_pred H
Confidence 4
No 12
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=8.8e-95 Score=800.54 Aligned_cols=443 Identities=24% Similarity=0.390 Sum_probs=406.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+.+..|| +++|..++.|+..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 13 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 86 (543)
T 1a6d_B 13 GTKRESG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKT 86 (543)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTC
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 4567888 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcC-----
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~----- 214 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+|+++
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~ 166 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSAS 166 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 4 89999997743
Q ss_pred -CchHHHHHHHHHHHhhccC--Cc-------eEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEe
Q 008279 215 -NNYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (571)
Q Consensus 215 -~~~~ls~li~~Av~~v~~~--g~-------I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIl 282 (571)
++++|++|+++|+.+++++ |. |+++ +|++++|+ ++++||+|+++|.|||| +++++||+|+
T Consensus 167 ~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 238 (543)
T 1a6d_B 167 VAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIA 238 (543)
T ss_dssp GGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEE
Confidence 4689999999999999876 53 7765 99999999 99999999999999985 4578999999
Q ss_pred eeccc-------------CCCHHHH-----------HHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeec
Q 008279 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (571)
Q Consensus 283 l~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk 338 (571)
++|++ +++++++ .++++++.+.|+||||++++|+++|+++|+.| +|+||+
T Consensus 239 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~ 312 (543)
T 1a6d_B 239 LLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRA------GIYAVR 312 (543)
T ss_dssp EESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHT------TCEEEC
T ss_pred EEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHC------CeeEec
Confidence 99998 7777765 78899999999999999999999999999987 467775
Q ss_pred cCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHH
Q 008279 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (571)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~ 415 (571)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 313 -----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 367 (543)
T 1a6d_B 313 -----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP--------------- 367 (543)
T ss_dssp -----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS---------------
T ss_pred -----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC---------------
Confidence 77899999999999999998 6899999999999999864 8899999998753
Q ss_pred hhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcC
Q 008279 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (571)
Q Consensus 416 ~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~ 494 (571)
++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.
T Consensus 368 --------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~ 427 (543)
T 1a6d_B 368 --------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKI 427 (543)
T ss_dssp --------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHT
T ss_pred --------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhc
Confidence 589999999999999999999999999999999999 99999999999999999998877
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeEEcCCCcccchhhcCcccchhHH-HHHHhc
Q 008279 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIA 570 (571)
Q Consensus 495 ~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~---~~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A 570 (571)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.|| ++|++|
T Consensus 428 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A 506 (543)
T 1a6d_B 428 GGRQQ-LAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESA 506 (543)
T ss_dssp CSSHH-HHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHH
T ss_pred CChHH-HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHH
Confidence 77765 89999999999999999999999999999999864 34589999999999999999999999999 999988
Q ss_pred C
Q 008279 571 L 571 (571)
Q Consensus 571 ~ 571 (571)
+
T Consensus 507 ~ 507 (543)
T 1a6d_B 507 T 507 (543)
T ss_dssp H
T ss_pred H
Confidence 4
No 13
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.5e-96 Score=808.67 Aligned_cols=447 Identities=21% Similarity=0.296 Sum_probs=409.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
.|+..|| .++|..++.|+..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 6788899 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC----
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 55 899999999865
Q ss_pred --chHHHHHHHHHHHhhcc--CCceEE-------ecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeee
Q 008279 216 --NYEVGNMIAEAMSKVGR--KGVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (571)
Q Consensus 216 --~~~ls~li~~Av~~v~~--~g~I~i-------~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~ 284 (571)
+++|++|+++|+.++++ +|.|.+ .+|++++|+ ++++||+|+++|.|||| |+++++||+|+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 68999999999999987 354333 359999998 99999999999999985 7788999999999
Q ss_pred cccCC-------------CHH-----------HHHHHHHHHHHcCCCeEEEcccc-----cHHHHHHHHHhhhcccceee
Q 008279 285 DKKIT-------------NAR-----------DLINVLEDAIRGAYPILIIAEDI-----EQEALATLVVNKLRGALKIA 335 (571)
Q Consensus 285 d~~i~-------------~~~-----------~l~~~le~i~~~g~~lvI~~~~i-----~~~aL~~l~~n~~~g~~~i~ 335 (571)
+++|+ +++ .+.++++++.+.|+||||++++| +++++++|..| +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99865 443 36788999999999999999999 99999999876 467
Q ss_pred eeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHH
Q 008279 336 ALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRT 412 (571)
Q Consensus 336 avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~ 412 (571)
||+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|....
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------- 370 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------- 370 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------
Confidence 776 66789999999999999999 578899999999999974 467888898875210
Q ss_pred HHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHh
Q 008279 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (571)
Q Consensus 413 ~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~ 491 (571)
.+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|++++
T Consensus 371 ---------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 429 (528)
T 3p9d_D 371 ---------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA 429 (528)
T ss_dssp ---------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCC
T ss_pred ---------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHh
Confidence 14689999999999999999999999999999999999 99999999999999999998
Q ss_pred hcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHH
Q 008279 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCI 567 (571)
Q Consensus 492 ~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l 567 (571)
.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.|| ++|
T Consensus 430 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 508 (528)
T 3p9d_D 430 RSMEGVQA-FIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAI 508 (528)
T ss_dssp TTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHH
T ss_pred hccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHH
Confidence 77777665 899999999999999999999999999999998754 4689999999999999999999999999 999
Q ss_pred HhcC
Q 008279 568 AIAL 571 (571)
Q Consensus 568 ~~A~ 571 (571)
++|.
T Consensus 509 ~~A~ 512 (528)
T 3p9d_D 509 TLAS 512 (528)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=7.7e-95 Score=800.76 Aligned_cols=442 Identities=23% Similarity=0.369 Sum_probs=409.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 142 (571)
+.++.|| +++|..++.|+..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 14 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 87 (545)
T 1a6d_A 14 GTQREQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKA 87 (545)
T ss_dssp ---CEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGC
T ss_pred cchhhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHh
Confidence 4567888 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC-ch-HHHHHHHhhc------C
Q 008279 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSA------G 214 (571)
Q Consensus 143 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~L~~va~ts~------~ 214 (571)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++| + +. +|.++|+||+ +
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999 7 55 8999999874 3
Q ss_pred CchHHHHHHHHHHHhhccC---------CceEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEee
Q 008279 215 NNYEVGNMIAEAMSKVGRK---------GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (571)
Q Consensus 215 ~~~~ls~li~~Av~~v~~~---------g~I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll 283 (571)
++++|++|+++|+.+++++ +.|+++ +|++++|+ ++++|++|+++|.|||| +++++||+|++
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 238 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIAL 238 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEE
Confidence 5789999999999999875 367776 99999999 99999999999999985 45789999999
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeecc
Q 008279 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (571)
Q Consensus 284 ~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~ 339 (571)
+|++ +++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||+
T Consensus 239 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~- 311 (545)
T 1a6d_A 239 IDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR- 311 (545)
T ss_dssp ECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-
T ss_pred EecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-
Confidence 9998 6777665 788999999999999999999999999999984 67775
Q ss_pred CCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHHh
Q 008279 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (571)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~ 416 (571)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 312 ----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~---------------- 366 (545)
T 1a6d_A 312 ----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP---------------- 366 (545)
T ss_dssp ----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS----------------
T ss_pred ----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC----------------
Confidence 78899999999999999998 6899999999999999864 7899999998753
Q ss_pred hhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCC
Q 008279 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (571)
Q Consensus 417 ~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~ 495 (571)
++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.+
T Consensus 367 -------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~ 427 (545)
T 1a6d_A 367 -------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVG 427 (545)
T ss_dssp -------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSC
T ss_pred -------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccC
Confidence 589999999999999999999999999999999999 999999999999999999988777
Q ss_pred chhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 496 ~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
+.+| +++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 428 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 506 (545)
T 1a6d_A 428 GREQ-LAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAV 506 (545)
T ss_dssp HHHH-HHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred ccHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHH
Confidence 7655 899999999999999999999999999999998643 4589999999999999999999999999 9999984
No 15
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-94 Score=795.28 Aligned_cols=446 Identities=22% Similarity=0.302 Sum_probs=405.9
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcc
Q 008279 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (571)
Q Consensus 65 ~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~ 144 (571)
+-.|| .++|..++.|+..|+++|+|||||+||+|||+++.|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 77 (529)
T 3iyg_A 4 DRSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQD 77 (529)
T ss_pred chhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhh
Confidence 34577 999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-cccccC--ch-HHHHHHHhhcC------
Q 008279 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------ 214 (571)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~-~L~~va~ts~~------ 214 (571)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++ +. .|.++|+||++
T Consensus 78 ~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 78 KEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 999987 45 89999999874
Q ss_pred CchHHHHHHHHHHHhhc---cCC-----c--eEE--ecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEe
Q 008279 215 NNYEVGNMIAEAMSKVG---RKG-----V--VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (571)
Q Consensus 215 ~~~~ls~li~~Av~~v~---~~g-----~--I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIl 282 (571)
++++|++|+++|+.+++ ++| . |++ .+|+++.|+ ++++||+|+++|.||+| ++.++||||+
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 229 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQGM-------PKRIVNAKIA 229 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCcccccC-------CcccCCceEE
Confidence 47899999999999997 333 2 444 589999998 99999999999999975 4578999999
Q ss_pred eecccC-------------CCHHH-----------HHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeec
Q 008279 283 LVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (571)
Q Consensus 283 l~d~~i-------------~~~~~-----------l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk 338 (571)
++|+++ +++++ +.++++++.+.|+||||++++|+++|+++|..| +|+||+
T Consensus 230 ll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~------gI~av~ 303 (529)
T 3iyg_A 230 CLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA------GAMAVR 303 (529)
T ss_pred EecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc------CCceec
Confidence 999964 34433 566789999999999999999999999999998 467776
Q ss_pred cCCccCcchhhHHHHHHHhCCeEeecccCcc-ccCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHH
Q 008279 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (571)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~-~~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~~ 414 (571)
++++.+|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++|++|++|+++
T Consensus 304 -----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------- 364 (529)
T 3iyg_A 304 -----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-------------- 364 (529)
T ss_pred -----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC--------------
Confidence 67899999999999999999755444 2456688999999998 678999999998764
Q ss_pred HhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhc
Q 008279 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (571)
Q Consensus 415 ~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~ 493 (571)
+.|||+|||+|+++++|.||+++||+|++|+++++| +||||||+|++++.+|++++.+
T Consensus 365 ---------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~ 423 (529)
T 3iyg_A 365 ---------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 423 (529)
T ss_pred ---------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhh
Confidence 489999999999999999999999999999999999 9999999999999999999988
Q ss_pred CCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C--------CceeEEcCCCcccchhhcCcccchh
Q 008279 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N--------HKYGYNAATGNYEDLMAAGIIDPTK 562 (571)
Q Consensus 494 ~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~--------~~~Gid~~~~~i~d~~~~gI~Dp~~ 562 (571)
+++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| + .++|||+.+|++.||++.|||||+.
T Consensus 424 ~~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~ 502 (529)
T 3iyg_A 424 MGSREQ-LAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTI 502 (529)
T ss_pred cCChHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHH
Confidence 888776 899999999999999999999999999999998753 2 5799999999999999999999999
Q ss_pred HH-HHHHhcC
Q 008279 563 VS-CCIAIAL 571 (571)
Q Consensus 563 vk-~~l~~A~ 571 (571)
|| ++|++|.
T Consensus 503 vk~~al~~A~ 512 (529)
T 3iyg_A 503 VKVKSLKFAT 512 (529)
T ss_pred HHHHHHHHHH
Confidence 99 9999883
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.2e-94 Score=790.97 Aligned_cols=442 Identities=22% Similarity=0.320 Sum_probs=402.3
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhc
Q 008279 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (571)
Q Consensus 64 k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (571)
++-.|| .++|..++.|+..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~q 76 (515)
T 3iyg_E 3 KSRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQ 76 (515)
T ss_pred chhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 345688 999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCc----h-HHHHHHHhhcCC---
Q 008279 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN--- 215 (571)
Q Consensus 144 ~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~-~L~~va~ts~~~--- 215 (571)
|+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+++
T Consensus 77 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i 156 (515)
T 3iyg_E 77 DDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVV 156 (515)
T ss_pred hhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999988753 3 899999999875
Q ss_pred ---chHHHHHHHHHHHhhccC-------CceEE--ecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEee
Q 008279 216 ---NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (571)
Q Consensus 216 ---~~~ls~li~~Av~~v~~~-------g~I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll 283 (571)
.+.|++++++|+..+.+. +.|++ .+|+++.|+ ++++||+|+++|.||||++ .++||+|++
T Consensus 157 ~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m~~-------~~~~~kIal 228 (515)
T 3iyg_E 157 NSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQMPK-------QVEDAKIAI 228 (515)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccccc-------cCCCceEEE
Confidence 478999999999998652 23444 579999998 9999999999999998643 467888888
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeecc
Q 008279 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (571)
Q Consensus 284 ~d~~-------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~ 339 (571)
++++ +++++++ .++++++.+.|+||||++++|+++|+++|+.|++ .+|+
T Consensus 229 l~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~- 301 (515)
T 3iyg_E 229 LTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVR- 301 (515)
T ss_pred EcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEe-
Confidence 7765 4566665 6789999999999999999999999999999854 5555
Q ss_pred CCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHH
Q 008279 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (571)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~i~~~~~~~~i~~ri~~l~~~~ 414 (571)
++++.+|+|||++|||++++ +++++++++||+|++|++ ++++|++|++|+++
T Consensus 302 ----~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-------------- 358 (515)
T 3iyg_E 302 ----WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-------------- 358 (515)
T ss_pred ----ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC--------------
Confidence 44589999999999999998 589999999999999986 45899999999764
Q ss_pred HhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhc
Q 008279 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (571)
Q Consensus 415 ~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~ 493 (571)
..|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++.+
T Consensus 359 ---------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~ 417 (515)
T 3iyg_E 359 ---------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADK 417 (515)
T ss_pred ---------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhcc
Confidence 378999999999999999999999999999999999 9999999999999999999888
Q ss_pred CCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc----CCCceeEEcCCCcccchhhcCcccchhHH-HHHH
Q 008279 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIA 568 (571)
Q Consensus 494 ~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~----~~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~ 568 (571)
+++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.|| ++|+
T Consensus 418 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 496 (515)
T 3iyg_E 418 CPTLEQ-YAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQIS 496 (515)
T ss_pred CCcHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHH
Confidence 877766 89999999999999999999999999999999864 34689999999999999999999999999 9999
Q ss_pred hcC
Q 008279 569 IAL 571 (571)
Q Consensus 569 ~A~ 571 (571)
+|.
T Consensus 497 ~A~ 499 (515)
T 3iyg_E 497 LAT 499 (515)
T ss_pred HHH
Confidence 884
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9e-94 Score=788.37 Aligned_cols=439 Identities=21% Similarity=0.312 Sum_probs=401.3
Q ss_pred ccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcccc
Q 008279 67 HFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 146 (571)
Q Consensus 67 ~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~~~ 146 (571)
.+| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||++
T Consensus 7 ~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~~ 80 (518)
T 3iyg_D 7 DKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDIE 80 (518)
T ss_pred hhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhhh
Confidence 345 789999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCCc------h
Q 008279 147 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN------Y 217 (571)
Q Consensus 147 ~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~~------~ 217 (571)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||++++ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~ 160 (518)
T 3iyg_D 81 AGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSS 160 (518)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHH
Confidence 9999999999999999999999999999999999999999999999999999987 45 8999999999875 8
Q ss_pred HHHHHHHHHHHhhcc---CCc-----eEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeeccc
Q 008279 218 EVGNMIAEAMSKVGR---KGV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK 287 (571)
Q Consensus 218 ~ls~li~~Av~~v~~---~g~-----I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~ 287 (571)
+|++|+++|+.++++ +|. |+++ +|++..|+ ++++||+|+++|.| . ||..++||+|++++++
T Consensus 161 ~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~~ 231 (518)
T 3iyg_D 161 LLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQFC 231 (518)
T ss_pred HHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEee
Confidence 999999999999985 454 5553 78999998 99999999999987 2 4556789999988876
Q ss_pred C-------------CCHH-----------HHHHHHHHHHHcCCCeEEE-----cccccHHHHHHHHHhhhcccceeeeec
Q 008279 288 I-------------TNAR-----------DLINVLEDAIRGAYPILII-----AEDIEQEALATLVVNKLRGALKIAALK 338 (571)
Q Consensus 288 i-------------~~~~-----------~l~~~le~i~~~g~~lvI~-----~~~i~~~aL~~l~~n~~~g~~~i~avk 338 (571)
+ ++++ ++.++++++.+.|+||||+ +++|+++|+++|..| +|+||+
T Consensus 232 Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~ 305 (518)
T 3iyg_D 232 LSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVK 305 (518)
T ss_pred ccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEe
Confidence 4 4454 3677899999999999999 899999999999986 579999
Q ss_pred cCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---c-ceEEEEcCCCChhhHHHHHHHHHHHH
Q 008279 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---K-DTTTIVGDGSTQDAVSKRVAQIRTLI 414 (571)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~-~~~~~i~~~~~~~~i~~ri~~l~~~~ 414 (571)
+|+ +.+|+|||++|||++++ +++++++++||+|+.|++. + +++++|++|++
T Consensus 306 ~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~--------------- 360 (518)
T 3iyg_D 306 DIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS--------------- 360 (518)
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC---------------
Confidence 886 46899999999999999 5899999999999999863 4 68899999864
Q ss_pred HhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhc
Q 008279 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (571)
Q Consensus 415 ~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~ 493 (571)
++++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|++++.+
T Consensus 361 -------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~ 421 (518)
T 3iyg_D 361 -------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRT 421 (518)
T ss_pred -------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhc
Confidence 24689999999999999999999999999999999999 9999999999999999999888
Q ss_pred CCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeEEcCCCcccchhhcCcccchhHH-HHHHh
Q 008279 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAI 569 (571)
Q Consensus 494 ~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~---~~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~ 569 (571)
.++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.|| ++|++
T Consensus 422 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 500 (518)
T 3iyg_D 422 LSGMES-YCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTL 500 (518)
T ss_pred CChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHH
Confidence 777766 89999999999999999999999999999999874 34689999999999999999999999999 99998
Q ss_pred cC
Q 008279 570 AL 571 (571)
Q Consensus 570 A~ 571 (571)
|.
T Consensus 501 A~ 502 (518)
T 3iyg_D 501 AT 502 (518)
T ss_pred HH
Confidence 83
No 18
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.8e-95 Score=799.89 Aligned_cols=442 Identities=23% Similarity=0.336 Sum_probs=406.2
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeec-CCCCcEEecChHHHhccccccCcccchHHHHHHHHHH
Q 008279 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLES-KYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (571)
Q Consensus 63 ~k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~-~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~ 141 (571)
+++..|| +++|..++.||..|+++|+|||||+||||||++ ++|+|+|||||+||||+|+++||. |+|++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 5788999 999999999999999999999999999999999 899999999999999999999997 999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhcccccCc-----h-HHHHHHHhhcC
Q 008279 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAA-GANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG 214 (571)
Q Consensus 142 ~q~~~~GDGTTt~vvLa~~Ll~~~~~li~~-Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~ 214 (571)
+||+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|++++++++. . +|.++|+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999875 5 89999999987
Q ss_pred C------chHHHHHHHHHHHhhccCC---ceEEe--cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEee
Q 008279 215 N------NYEVGNMIAEAMSKVGRKG---VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (571)
Q Consensus 215 ~------~~~ls~li~~Av~~v~~~g---~I~i~--~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll 283 (571)
+ +++|++|+++|+.++++++ .|+++ .|+++.|+ ++++||+|+++|.||| | ..++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~----p----~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ----P----KRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC----C----SCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC----C----eeeecceEEE
Confidence 5 6899999999999999887 67764 69999998 9999999999999996 2 3568999999
Q ss_pred eccc--------------CCCHHHH-----------HHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeec
Q 008279 284 VDKK--------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (571)
Q Consensus 284 ~d~~--------------i~~~~~l-----------~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk 338 (571)
++++ +++++++ .++++++.+.|+||||++++|+++++++|..+ +++||+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEe
Confidence 8875 3455554 56889999999999999999999999999987 468887
Q ss_pred cCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHH
Q 008279 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (571)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~~~ 415 (571)
+++ +.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.+|++
T Consensus 308 ~~~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 361 (527)
T 3p9d_B 308 HAD-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA---------------- 361 (527)
T ss_dssp CCH-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC----------------
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC----------------
Confidence 655 57799999999999998 58899999999999998 56889999999865
Q ss_pred hhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcC
Q 008279 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (571)
Q Consensus 416 ~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~ 494 (571)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++
T Consensus 362 -------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 362 -------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp -------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 3689999999999999999999999999999999999 99999999999999999998777
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeEEcCCCcccchhhcCcccchhHH-HHHHhc
Q 008279 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIA 570 (571)
Q Consensus 495 ~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~---~~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A 570 (571)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.|| ++|++|
T Consensus 423 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A 501 (527)
T 3p9d_B 423 DGKKS-LAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSA 501 (527)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHH
Confidence 77765 89999999999999999999999999999999875 35689999999999999999999999999 999987
Q ss_pred C
Q 008279 571 L 571 (571)
Q Consensus 571 ~ 571 (571)
.
T Consensus 502 ~ 502 (527)
T 3p9d_B 502 S 502 (527)
T ss_dssp H
T ss_pred H
Confidence 3
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.6e-94 Score=795.32 Aligned_cols=448 Identities=23% Similarity=0.328 Sum_probs=404.4
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhc
Q 008279 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (571)
Q Consensus 64 k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (571)
++..|| .++|..++.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 38 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 111 (562)
T 3p9d_E 38 KKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKSQ 111 (562)
T ss_dssp CSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHH
T ss_pred ceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHHH
Confidence 678899 999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCc-------hHHHHHHHhhcCC-
Q 008279 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-------SELADVAAVSAGN- 215 (571)
Q Consensus 144 ~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-------~~L~~va~ts~~~- 215 (571)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. ++|.++|+||+++
T Consensus 112 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK 191 (562)
T 3p9d_E 112 DDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSK 191 (562)
T ss_dssp HHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSS
T ss_pred HhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999998864 2699999998764
Q ss_pred -----chHHHHHHHHHHHhhccC-------CceEE--ecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeE
Q 008279 216 -----NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKL 281 (571)
Q Consensus 216 -----~~~ls~li~~Av~~v~~~-------g~I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kI 281 (571)
.+.|++++++|+..+.+. +.|++ .+|++++|+ ++++||+|+++|.||||+++.+ .+..+++|+|
T Consensus 192 ~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kI 269 (562)
T 3p9d_E 192 IVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVKL 269 (562)
T ss_dssp TTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCEE
T ss_pred hhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccceE
Confidence 478999999999998652 23444 579999998 9999999999999999866432 1223478999
Q ss_pred eeeccc-------------CCCHHH-----------HHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeee
Q 008279 282 LLVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAAL 337 (571)
Q Consensus 282 ll~d~~-------------i~~~~~-----------l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~av 337 (571)
++++++ ++++++ +.++++++.+.|+||||++++|+++++++|+.|++ .+|
T Consensus 270 all~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~v 343 (562)
T 3p9d_E 270 AILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PAV 343 (562)
T ss_dssp CEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CCE
T ss_pred EEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EEE
Confidence 988875 345555 57889999999999999999999999999998854 455
Q ss_pred ccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHH
Q 008279 338 KAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRT 412 (571)
Q Consensus 338 k~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~i~~~~~~~~i~~ri~~l~~ 412 (571)
+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|++|++|+++
T Consensus 344 ~-----~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~------------ 401 (562)
T 3p9d_E 344 R-----WVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET------------ 401 (562)
T ss_dssp E-----CCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC------------
T ss_pred e-----ccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC------------
Confidence 5 45688999999999999999 589999999999999987 36899999999764
Q ss_pred HHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHh
Q 008279 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (571)
Q Consensus 413 ~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~ 491 (571)
..|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++++|++++
T Consensus 402 -----------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~ 458 (562)
T 3p9d_E 402 -----------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEA 458 (562)
T ss_dssp -----------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHH
T ss_pred -----------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999 99999999999999999998
Q ss_pred hcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc----CCCceeEEcCCCcccchhhcCcccchhHH-HH
Q 008279 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVS-CC 566 (571)
Q Consensus 492 ~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~----~~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~ 566 (571)
.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.|| ++
T Consensus 459 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~a 537 (562)
T 3p9d_E 459 DKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQ 537 (562)
T ss_dssp HTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHH
T ss_pred ccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHH
Confidence 88877766 89999999999999999999999999999999864 35689999999999999999999999999 99
Q ss_pred HHhcC
Q 008279 567 IAIAL 571 (571)
Q Consensus 567 l~~A~ 571 (571)
|++|.
T Consensus 538 l~~A~ 542 (562)
T 3p9d_E 538 ILLAT 542 (562)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99873
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.4e-93 Score=782.42 Aligned_cols=436 Identities=20% Similarity=0.317 Sum_probs=400.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcccccCCcc
Q 008279 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (571)
Q Consensus 72 ~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~~~~GDGT 151 (571)
.++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+|||++|+++||+ |||++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcCC------chHHHHH
Q 008279 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (571)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~~------~~~ls~l 222 (571)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . .|.++|+||+++ .+.++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999874 3 899999998764 4678899
Q ss_pred HHHHHHhhccC--C--------ceEE--ecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeecc----
Q 008279 223 IAEAMSKVGRK--G--------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK---- 286 (571)
Q Consensus 223 i~~Av~~v~~~--g--------~I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~---- 286 (571)
+++|+..+.++ + +|++ .+|++++|+ ++++||+|+++|.||. |+++++||+|+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999988632 2 1333 589999998 9999999999999984 678899999999999
Q ss_pred ---------cCCCHHHHHHHHH-----------HHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcc
Q 008279 287 ---------KITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346 (571)
Q Consensus 287 ---------~i~~~~~l~~~le-----------~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~ 346 (571)
.+++++++.++++ ++.+.|++|||++++|++.++++|..+ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 4678888887776 899999999999999999999999874 45665 5888
Q ss_pred hhhHHHHHHHhCCeEeecccCccccCCCCCCcee-eeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHH
Q 008279 347 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (571)
Q Consensus 347 ~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~-~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e 422 (571)
+.+|+|||++|||++++ +++++++++||+ |+.|++. +++|+||++|+++
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999999 588999999999 9999854 5689999999764
Q ss_pred HHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCCchhhHH
Q 008279 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (571)
Q Consensus 423 ~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~e~~~ 501 (571)
..|||+|||+|+++++|+||+++||||++|++++++ +|||||++|++++.+|++++.++++.+| +
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq-~ 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ-W 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH-H
Confidence 479999999999999999999999999999999776 9999999999999999999888888776 8
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 502 GADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 502 ~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~----~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.|| ++|++|.
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~ 498 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAV 498 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHH
Confidence 99999999999999999999999999999998754 4579999999999999999999999999 9999883
No 21
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=7.4e-95 Score=801.06 Aligned_cols=444 Identities=20% Similarity=0.283 Sum_probs=404.4
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhc
Q 008279 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (571)
Q Consensus 64 k~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 143 (571)
.+-.+| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 17 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~q 90 (550)
T 3p9d_G 17 TDASQG--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQ 90 (550)
T ss_dssp CCEEES--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHH
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHh
Confidence 455677 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccCc-----h-HHHHHHHhhcC---
Q 008279 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG--- 214 (571)
Q Consensus 144 ~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~--- 214 (571)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. . +|.++|+||++
T Consensus 91 d~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~ 170 (550)
T 3p9d_G 91 DAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKL 170 (550)
T ss_dssp HTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTT
T ss_pred hhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999998853 4 79999999854
Q ss_pred ---CchHHHHHHHHHHHhhccC-------CceEEecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeee
Q 008279 215 ---NNYEVGNMIAEAMSKVGRK-------GVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (571)
Q Consensus 215 ---~~~~ls~li~~Av~~v~~~-------g~I~i~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~ 284 (571)
++++|++|+++|+.+++++ +++++ +|++++|| ++++||+|+++|.||||.+ |+..++||+|+++
T Consensus 171 ~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~ 244 (550)
T 3p9d_G 171 IHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSL 244 (550)
T ss_dssp TGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEE
T ss_pred ccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEe
Confidence 4789999999999999843 45554 69999999 9999999999999999965 5556999999999
Q ss_pred ccc-------------CCCHHHHHH-----------HHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccC
Q 008279 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (571)
Q Consensus 285 d~~-------------i~~~~~l~~-----------~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~ 340 (571)
|++ +++++++.+ +++++.+.|++|||++++|++.++++|..+ +++++
T Consensus 245 ~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~v--- 315 (550)
T 3p9d_G 245 NVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NIFCA--- 315 (550)
T ss_dssp CSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TCEEE---
T ss_pred ccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CCccc---
Confidence 997 456655544 678899999999999999999888877643 44554
Q ss_pred CccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 008279 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (571)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~ 417 (571)
+++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+++
T Consensus 316 --~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~----------------- 371 (550)
T 3p9d_G 316 --GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA----------------- 371 (550)
T ss_dssp --ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------------
T ss_pred --cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------------
Confidence 577899999999999999998 689999999999999975 57899999998753
Q ss_pred hcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCCc
Q 008279 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDN 496 (571)
Q Consensus 418 ~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~ 496 (571)
++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++
T Consensus 372 ------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 433 (550)
T 3p9d_G 372 ------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAG 433 (550)
T ss_dssp ------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCS
T ss_pred ------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCCh
Confidence 489999999999999999999999999999999999 9999999999999999999888877
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 497 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 497 ~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 434 ~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 511 (550)
T 3p9d_G 434 KQQ-MIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSAT 511 (550)
T ss_dssp TTH-HHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHH
Confidence 766 899999999999999999999999999999998753 5689999999999999999999999999 9999873
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-92 Score=778.22 Aligned_cols=435 Identities=20% Similarity=0.296 Sum_probs=394.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcccccCCcc
Q 008279 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (571)
Q Consensus 72 ~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~~~~GDGT 151 (571)
+++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 589999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhc----ccccCch-HHHHHHHhhcCC-----chHHHH
Q 008279 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM----SKEVEDS-ELADVAAVSAGN-----NYEVGN 221 (571)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~----s~~v~~~-~L~~va~ts~~~-----~~~ls~ 221 (571)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ ++++++. +|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5566666 899999999876 789999
Q ss_pred HHHHHHHhhccC-CceEE-------ecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeeccc------
Q 008279 222 MIAEAMSKVGRK-GVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (571)
Q Consensus 222 li~~Av~~v~~~-g~I~i-------~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~------ 287 (571)
|+++|+.+++++ +.|.+ ..|+++.|+ ++++||+|+++|.+ |+..++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccc
Confidence 999999999876 44332 469999888 99999999999865 3446788999988875
Q ss_pred -------CCCHHHHHHH-------HH----HHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhh
Q 008279 288 -------ITNARDLINV-------LE----DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (571)
Q Consensus 288 -------i~~~~~l~~~-------le----~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~ 349 (571)
+++++++.++ ++ ++.+.|+||||++++|++.++++|.. .+|+||++|+ +.+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k------~~I~av~~~~-----~~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANK------YNIMLVRLNS-----KWD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHH------CCeEEEEeCC-----HHH
Confidence 5667777665 44 88999999999999999999887764 3789999777 467
Q ss_pred HHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHH
Q 008279 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (571)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l 426 (571)
|+|||++|||++++ +++++++++||+|++|++. ++++++|++|+.
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------- 352 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------- 352 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------
Confidence 99999999999999 6899999999999999864 568899988742
Q ss_pred HHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCCchhhHHHHHH
Q 008279 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (571)
Q Consensus 427 ~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~ 505 (571)
.+++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.+| +++++
T Consensus 353 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 424 (512)
T 3iyg_Q 353 -------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKK 424 (512)
T ss_pred -------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 25799999999999999999999999999999999999 9999999999999999999888877766 89999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeEEcCCC--cccchhhcCcccchhHH-HHHHhcC
Q 008279 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATG--NYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 506 ~~~AL~~ip~~La~NaG~d~~~vi~kl~~~---~~~~~Gid~~~~--~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+| +|.||++.|||||+.|| ++|++|.
T Consensus 425 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 496 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLAT 496 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHH
Confidence 999999999999999999999999999875 357899999965 99999999999999999 9999883
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.1e-92 Score=774.53 Aligned_cols=439 Identities=23% Similarity=0.349 Sum_probs=394.4
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhccc
Q 008279 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (571)
Q Consensus 66 i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~~ 145 (571)
...| .+++..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+
T Consensus 5 ~~~~--~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~ 78 (517)
T 3iyg_Z 5 VARA--QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDD 78 (517)
T ss_pred hhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 3455 889999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC-ch-HHHHHHHhhcCC------ch
Q 008279 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSAGN------NY 217 (571)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~L~~va~ts~~~------~~ 217 (571)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. .|.++|+||+++ .+
T Consensus 79 e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 79 ITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred HhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999987 55 899999999764 47
Q ss_pred HHHHHHHHHHHhhccCC------c--eEEecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeecccC-
Q 008279 218 EVGNMIAEAMSKVGRKG------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (571)
Q Consensus 218 ~ls~li~~Av~~v~~~g------~--I~i~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i- 288 (571)
.|++++++|+..+.+.+ . |...+|++..|+ ++++||+|+++|.||| |+++++||+|+++|++|
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le 230 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLE 230 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccc
Confidence 89999999999886532 1 344689999998 8999999999999997 67789999999999875
Q ss_pred ------------CCHHHHH-----------HHHHHHHHcCCC--------e-EEEcccccHHHHHHHHHhhhcccceeee
Q 008279 289 ------------TNARDLI-----------NVLEDAIRGAYP--------I-LIIAEDIEQEALATLVVNKLRGALKIAA 336 (571)
Q Consensus 289 ------------~~~~~l~-----------~~le~i~~~g~~--------l-vI~~~~i~~~aL~~l~~n~~~g~~~i~a 336 (571)
++++++. ..++.+...+.+ + ||++++|+++++++|..+ +|++
T Consensus 231 ~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~ 304 (517)
T 3iyg_Z 231 YEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIA 304 (517)
T ss_pred ccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEE
Confidence 3444432 345566555544 4 566799999999999886 4577
Q ss_pred eccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCC-ceeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHH
Q 008279 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV-LGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRT 412 (571)
Q Consensus 337 vk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~-lG~~~~v---~i~~~~~~~i~~~~~~~~i~~ri~~l~~ 412 (571)
|+ ++++.+|+|||++|||++++ +++++++++ ||+|+ | +++++++++|++|+++
T Consensus 305 v~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~------------ 361 (517)
T 3iyg_Z 305 LR-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP------------ 361 (517)
T ss_pred EE-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCc------------
Confidence 76 45688999999999999999 689999999 99999 9 4678999999999764
Q ss_pred HHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHh
Q 008279 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (571)
Q Consensus 413 ~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~ 491 (571)
..|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++
T Consensus 362 -----------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 418 (517)
T 3iyg_Z 362 -----------------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYK 418 (517)
T ss_pred -----------------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHh
Confidence 268999999999999999999999999999999999 99999999999999999998
Q ss_pred hcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHH
Q 008279 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCI 567 (571)
Q Consensus 492 ~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l 567 (571)
.+.++.+| +++++|++||+.+|++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.|| ++|
T Consensus 419 ~~~~g~eq-~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 497 (517)
T 3iyg_Z 419 PSVKGRAQ-LGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLL 497 (517)
T ss_pred ccCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHH
Confidence 87777665 899999999999999999999999999999998754 5689999999999999999999999999 999
Q ss_pred HhcC
Q 008279 568 AIAL 571 (571)
Q Consensus 568 ~~A~ 571 (571)
++|.
T Consensus 498 ~~A~ 501 (517)
T 3iyg_Z 498 HSCT 501 (517)
T ss_pred HHHH
Confidence 9883
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=9e-92 Score=779.13 Aligned_cols=436 Identities=21% Similarity=0.278 Sum_probs=397.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcccccCCcc
Q 008279 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (571)
Q Consensus 72 ~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~~~~GDGT 151 (571)
+++|..++.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 25 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 100 (568)
T 3p9d_H 25 DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKIDMGDGT 100 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhceeCCCc
Confidence 579999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhccccc----Cch-HHHHHHHhhcC-----CchHHHH
Q 008279 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV----EDS-ELADVAAVSAG-----NNYEVGN 221 (571)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v----~~~-~L~~va~ts~~-----~~~~ls~ 221 (571)
||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++++ ++. +|.++|+||++ ++++|++
T Consensus 101 TtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 180 (568)
T 3p9d_H 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSE 180 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999876 344 89999999864 3589999
Q ss_pred HHHHHHHhhccC-----C-------ceEE--ecCCccccceeeeeeeEEeecccCCccccCcccCeeeec---ceeEeee
Q 008279 222 MIAEAMSKVGRK-----G-------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE---NCKLLLV 284 (571)
Q Consensus 222 li~~Av~~v~~~-----g-------~I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~---n~kIll~ 284 (571)
|+++|+.+++++ + .|++ .+|++++|| ++++|++|+++|. +|+++++ ||||+++
T Consensus 181 livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll 250 (568)
T 3p9d_H 181 LVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVF 250 (568)
T ss_dssp HHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEE
T ss_pred HHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEE
Confidence 999999999874 3 4555 469999999 9999999999863 3677888 9999999
Q ss_pred ccc-------------CCCHHHHHH-----------HHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccC
Q 008279 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (571)
Q Consensus 285 d~~-------------i~~~~~l~~-----------~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~ 340 (571)
+++ +++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||+++
T Consensus 251 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v 324 (568)
T 3p9d_H 251 TCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVP 324 (568)
T ss_dssp CSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCC
T ss_pred ccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecC
Confidence 987 677777654 788999999999999999999999999886 57899876
Q ss_pred CccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 008279 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (571)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~ 417 (571)
+ +.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+.
T Consensus 325 ~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 376 (568)
T 3p9d_H 325 S-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG------------------ 376 (568)
T ss_dssp C-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS------------------
T ss_pred C-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCC------------------
Confidence 5 78899999999999999 588999999999999975 4589999999862
Q ss_pred hcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHh--cC-ccccchhHhhHHHHHHHHHhhcC
Q 008279 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE--EG-IVVGGGCTLLRLSSKVDAIKETL 494 (571)
Q Consensus 418 ~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~--~g-vVpGGGa~e~~ls~~L~~~~~~~ 494 (571)
+.+++|||+|||+|+++++|+||+++||||++|++++ ++ +|||||++|++++.+|++++.++
T Consensus 377 ---------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~ 441 (568)
T 3p9d_H 377 ---------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERT 441 (568)
T ss_dssp ---------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTC
T ss_pred ---------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccC
Confidence 1246899999999999999999999999999999999 65 99999999999999999999888
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-----------CCceeEEcCCCc---ccchhhcCcccc
Q 008279 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGN---YEDLMAAGIIDP 560 (571)
Q Consensus 495 ~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~~-----------~~~~Gid~~~~~---i~d~~~~gI~Dp 560 (571)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+ +.||++.|||||
T Consensus 442 ~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp 520 (568)
T 3p9d_H 442 PGLLQ-LAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDM 520 (568)
T ss_dssp CSTHH-HHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEc
Confidence 88776 899999999999999999999999999999998764 347999999997 999999999999
Q ss_pred hhHH-HHHHhcC
Q 008279 561 TKVS-CCIAIAL 571 (571)
Q Consensus 561 ~~vk-~~l~~A~ 571 (571)
+.|| ++|++|.
T Consensus 521 ~~vk~~al~~A~ 532 (568)
T 3p9d_H 521 LATKKFAINVAT 532 (568)
T ss_dssp HHHHHHHHHCCE
T ss_pred HHHHHHHHHHHH
Confidence 9999 9999883
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.1e-91 Score=776.24 Aligned_cols=441 Identities=23% Similarity=0.328 Sum_probs=391.9
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceeeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcc
Q 008279 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (571)
Q Consensus 65 ~i~~~~~~~~r~~~~~~i~~la~~v~ttlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~ 144 (571)
+...| .+++..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 11 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 11 ESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp EEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred chhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 44556 889999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccC----ch-HHHHHHHhhcCC----
Q 008279 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN---- 215 (571)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~-~L~~va~ts~~~---- 215 (571)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. .|.++|+||+++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999885 34 899999999875
Q ss_pred --chHHHHHHHHHHHhhccC-------CceEE--ecCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeee
Q 008279 216 --NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (571)
Q Consensus 216 --~~~ls~li~~Av~~v~~~-------g~I~i--~~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~ 284 (571)
.+.|++++++|+..+.+. ..|++ .+|++..|+ ++++||+|+++|.||+ |+++++||+|+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 478999999999998631 12443 579999999 9999999999999984 7788999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHH---------cCCC-eEEEcccccHHHHHHHHHhhhcc
Q 008279 285 DKKIT-------------NARD-----------LINVLEDAIR---------GAYP-ILIIAEDIEQEALATLVVNKLRG 330 (571)
Q Consensus 285 d~~i~-------------~~~~-----------l~~~le~i~~---------~g~~-lvI~~~~i~~~aL~~l~~n~~~g 330 (571)
|++|. ++++ +...++.+.. .|+| |||++++|+++|+++|..|+
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g--- 313 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN--- 313 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT---
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC---
Confidence 98753 2221 2234556554 3455 66777899999999999884
Q ss_pred cceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHH
Q 008279 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRV 407 (571)
Q Consensus 331 ~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri 407 (571)
+++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++|+||++|+++
T Consensus 314 ---I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 373 (546)
T 3p9d_F 314 ---ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------- 373 (546)
T ss_dssp ---CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------
T ss_pred ---CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------
Confidence 56766 55688999999999999999 68999999999999994 678999999999864
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHH
Q 008279 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSK 486 (571)
Q Consensus 408 ~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~ 486 (571)
..|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+
T Consensus 374 ----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~ 425 (546)
T 3p9d_F 374 ----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRY 425 (546)
T ss_dssp ----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHH
T ss_pred ----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHH
Confidence 479999999999999999999999999999999999 999999999999999
Q ss_pred HHH---HhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc--------CCCceeEEcCCCcccchhhc
Q 008279 487 VDA---IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS--------DNHKYGYNAATGNYEDLMAA 555 (571)
Q Consensus 487 L~~---~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~kl~~~--------~~~~~Gid~~~~~i~d~~~~ 555 (571)
|++ ++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.
T Consensus 426 L~~~~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~ 504 (546)
T 3p9d_F 426 LRSANMNKLGAKGKTK-TGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIE 504 (546)
T ss_dssp HHHHHTTTTTTTSHHH-HHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGG
T ss_pred HHhhhhhhhcCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhc
Confidence 998 5777777665 89999999999999999999999999999999864 34579999999999999999
Q ss_pred CcccchhHH-HHHHhcC
Q 008279 556 GIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 556 gI~Dp~~vk-~~l~~A~ 571 (571)
|||||+.|| ++|++|.
T Consensus 505 gI~dp~~vk~~al~~A~ 521 (546)
T 3p9d_F 505 GIWDSYRVLRNAITGAT 521 (546)
T ss_dssp TCEEEHHHHHHHHHHHH
T ss_pred cCEecHHHHHHHHHHHH
Confidence 999999999 9999873
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.2e-85 Score=720.83 Aligned_cols=407 Identities=23% Similarity=0.373 Sum_probs=331.0
Q ss_pred eeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhcccccCCcccHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 008279 101 VLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180 (571)
Q Consensus 101 mI~~~~g~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q~~~~GDGTTt~vvLa~~Ll~~~~~li~~Gi~p~~I~~ 180 (571)
||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6888899999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhc------CCchHHHHHHHHHHHhhccC--Cc--------eEEe--
Q 008279 181 GIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------GNNYEVGNMIAEAMSKVGRK--GV--------VTLE-- 239 (571)
Q Consensus 181 g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~------~~~~~ls~li~~Av~~v~~~--g~--------I~i~-- 239 (571)
||++|++.++++|+++++|++. . +|.++|+||+ +++++|++|+++|+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999874 4 8999999874 35799999999999999876 43 5554
Q ss_pred cCCccccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeeccc-------------CCCHHHH-----------H
Q 008279 240 EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------I 295 (571)
Q Consensus 240 ~G~~~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~-------------i~~~~~l-----------~ 295 (571)
+|++++|+ ++++|++|+++|.|||| +++++||+|+++|++ +++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999988 99999999999999975 567899999999998 6677765 8
Q ss_pred HHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCC
Q 008279 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGK 375 (571)
Q Consensus 296 ~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~ 375 (571)
++++++.+.|+||||++++|+++|+++|+.|+ |+||+ ++++.+|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 89999999999999999999999999999974 67774 78899999999999999998 6899999
Q ss_pred CCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHHHHHH
Q 008279 376 EVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (571)
Q Consensus 376 ~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~~l~E 452 (571)
++||+|+.|++. +++|++|++|++ +++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCcHHHHHH
Confidence 999999999875 899999999875 358999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchhHhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHH
Q 008279 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (571)
Q Consensus 453 ~~r~l~DAl~~~r~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~e~~~~~~~~~~AL~~ip~~La~NaG~d~~~vi~k 531 (571)
+||+++||+|++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999 9999999999999999999887777665 8999999999999999999999999999999
Q ss_pred HHhcC---CCceeEEcCCCcccchhhcCcccchhHH-HHHHhcC
Q 008279 532 VLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVS-CCIAIAL 571 (571)
Q Consensus 532 l~~~~---~~~~Gid~~~~~i~d~~~~gI~Dp~~vk-~~l~~A~ 571 (571)
|++.| +.++|||+.+|++.||++.|||||+.|| ++|++|+
T Consensus 417 l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 460 (500)
T 3aq1_B 417 LRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAM 460 (500)
T ss_dssp HHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHH
Confidence 98642 3589999999999999999999999999 9999984
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-46 Score=351.55 Aligned_cols=193 Identities=48% Similarity=0.801 Sum_probs=189.5
Q ss_pred eeeeeeeEEeecccCCccccCcccCeeeecceeEeeecccCCCHHHHHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhh
Q 008279 248 LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNK 327 (571)
Q Consensus 248 ~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~ 327 (571)
+++++||.||+||+||||++++++|.++++||+||++|.+|++.++++|+||.+.+.|+||+|++++|+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 008279 328 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRV 407 (571)
Q Consensus 328 ~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~ri 407 (571)
++|.++++|||+|+||+.|+..|+|||.+|||++++++.|+++++++.++||+|++|++++|+|+++.|.+++++|+.||
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEE
Q 008279 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVI 440 (571)
Q Consensus 408 ~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI 440 (571)
+||+.+++.++++|||++|+||+++|+|++++|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998764
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=3.7e-45 Score=343.05 Aligned_cols=189 Identities=57% Similarity=0.892 Sum_probs=185.4
Q ss_pred eeeeEEeecccCCccccCcccCeeeecceeEeeecccCCCHHHHHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcc
Q 008279 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (571)
Q Consensus 251 v~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g 330 (571)
.+||.||+||+||||++++++|.++++||+||++|.+|+++++++|+||.+.+.|+||+|++++|+++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 008279 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQI 410 (571)
Q Consensus 331 ~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l 410 (571)
.++++|||+|+||+.|+..|+|||++|||++++++.|+++++++.++||+|++|++++|+|+++.|.+++++|+.||+||
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHhhcCCeEE
Q 008279 411 RTLIENAEQDYEREKLNERIAKLSGGVAV 439 (571)
Q Consensus 411 ~~~~~~~~~~~e~~~l~er~~~l~g~~~t 439 (571)
+.+++.++++||||+|+||+++|+|++++
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999763
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=5.1e-35 Score=261.96 Aligned_cols=144 Identities=56% Similarity=0.922 Sum_probs=141.9
Q ss_pred eeEEeecccCCccccCcccCeeeecceeEeeecccCCCHHHHHHHHHHHHHcCCCeEEEcccccHHHHHHHHHhhhcccc
Q 008279 253 GMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGAL 332 (571)
Q Consensus 253 G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~~~~~l~~~le~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~ 332 (571)
||.||+||+||||++++++|..+++||+||++|++|++.++++|+||++.+.|+||+|++++|++|||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEEecceEEEEcC
Q 008279 333 KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGD 396 (571)
Q Consensus 333 ~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~i~~ 396 (571)
+++|||+|+||+.|+..|+|||.+|||++++++.|+++++.+.++||+|++|++++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.87 E-value=6.4e-22 Score=187.98 Aligned_cols=146 Identities=17% Similarity=0.291 Sum_probs=119.8
Q ss_pred cccceeeeeeeEEeecccCCccccCcccCeeeecceeEeeecccCC-------------CHHH-----------HHHHHH
Q 008279 244 AENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLE 299 (571)
Q Consensus 244 ~~ds~~lv~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~-------------~~~~-----------l~~~le 299 (571)
++|| ++++|++|++++.+| +||+.++||||+++++++. ++++ +..+++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3678 899999999998876 4778899999999999753 2222 355788
Q ss_pred HHHHcCCCeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCce
Q 008279 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (571)
Q Consensus 300 ~i~~~g~~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG 379 (571)
++++.|++|||++++|+|.|+++|..+ +|+||+ ++++.+|+|||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRA------NVTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHC------CCEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 999999999999999999999999887 457765 67799999999999999999 68999999999
Q ss_pred e-eeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHhhcCCeEEEEEccCCHH
Q 008279 380 N-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (571)
Q Consensus 380 ~-~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~l~er~~~l~g~~~tI~vrG~t~~ 448 (571)
+ |+.|+ ++++++++|+||+++ ..|||+|||+|.+
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99997 457899999998764 4789999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.77 E-value=2e-18 Score=160.89 Aligned_cols=126 Identities=22% Similarity=0.343 Sum_probs=108.1
Q ss_pred eeeeEEeecccCCccccCcccCeeeecceeEeeecccCC-------------CHHH-----------HHHHHHHHHHcCC
Q 008279 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLEDAIRGAY 306 (571)
Q Consensus 251 v~G~~~~~g~~~p~~~~~~~~~~~~~~n~kIll~d~~i~-------------~~~~-----------l~~~le~i~~~g~ 306 (571)
++|++|++++.+| +||+.++||||+++++++. ++++ +..+++++++.|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 5799999998876 4778899999999999753 3332 3457889999999
Q ss_pred CeEEEcccccHHHHHHHHHhhhcccceeeeeccCCccCcchhhHHHHHHHhCCeEeecccCccccCCCCCCceeeeEEEE
Q 008279 307 PILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL 386 (571)
Q Consensus 307 ~lvI~~~~i~~~aL~~l~~n~~~g~~~i~avk~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~~~~~~~~~lG~~~~v~i 386 (571)
++||++++|++.|+++|..+ +|+||+ ++++.+|+|||++|||++++ ++++++++.||+|+.|+.
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 99999999999999999887 457765 67799999999999999999 689999999999999974
Q ss_pred ---ecceEEEEcCCCC
Q 008279 387 ---TKDTTTIVGDGST 399 (571)
Q Consensus 387 ---~~~~~~~i~~~~~ 399 (571)
+++++++|++|++
T Consensus 138 ~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKN 153 (159)
T ss_dssp EEETTEEEEEEESCC-
T ss_pred EEECCeEEEEEECCCC
Confidence 5789999999976
Done!