BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008281
(571 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S746|HTH_ARATH Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1
Length = 594
Score = 601 bits (1550), Expect = e-171, Method: Compositional matrix adjust.
Identities = 299/534 (55%), Positives = 380/534 (71%), Gaps = 15/534 (2%)
Query: 45 SYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFGAALSDLSSTSP 104
S YDYI+IGGGTAGCPLAATLSQN SVL+LERGG P+ N N++ L +F L+D+S++S
Sbjct: 61 SSYDYIVIGGGTAGCPLAATLSQNFSVLVLERGGVPFTNANVSFLRNFHIGLADISASSA 120
Query: 105 SQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVEKVVAF 164
SQ F+S DGV N+RARVLGGGSC+NAGFY+RA +V+ GWD +LV ESY WVE+ +
Sbjct: 121 SQAFVSTDGVYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVEREIVH 180
Query: 165 EPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPS 224
+P + WQ A+RD L+EVGV P+NGFTYDH+ GTKIGGTIFD+ G+RHTAA+LL YANP
Sbjct: 181 QPKLTLWQKALRDSLLEVGVRPFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQ 240
Query: 225 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 284
L +L++A+V K++F G RP GV+F+D G +H+A L N +E+I+S+GA+GSP
Sbjct: 241 KLRVLIYATVQKIVFDTSG-TRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSP 299
Query: 285 QLLMLSGAH--------NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQ 336
Q+LMLSG I VVL+ VG+GM+DNPMN I VPS P+E SLIQ VGIT+
Sbjct: 300 QMLMLSGIGPKKELQRLKIPVVLENEHVGKGMADNPMNTILVPSKAPIEQSLIQTVGITK 359
Query: 337 FGSYIEAASGENFAGGSPSP--RDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDD 394
G Y+EA++G G SP YG+ S K S +P KQR PEA I K
Sbjct: 360 MGVYVEASTG---FGQSPESIHTHYGIMSNKNELFSTIPAKQRRPEATQAYITRNKYQLH 416
Query: 395 PAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIE 454
AF G FILEK+ P+S GHL L N +DNPSVTFNYFK P DLQRCV+ I + K++
Sbjct: 417 EAFNGSFILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVT 476
Query: 455 SKSFSKF-KYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQV 513
S F + + + +V +++++ A +NL P+ N + S+ QFC+DTV+TIWHYHGGC V
Sbjct: 477 SNRFLNYTQCDKQNVHKMLSLSVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLV 536
Query: 514 GKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLAS 567
GKVV + KVLGVD LRVIDGSTF SPGTNPQAT+MM+GRYMGV+IL ERL +
Sbjct: 537 GKVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMGRYMGVKILRERLGN 590
>sp|Q9SSM2|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana GN=At1g73050
PE=2 SV=1
Length = 552
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/548 (47%), Positives = 340/548 (62%), Gaps = 53/548 (9%)
Query: 34 FMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFG 93
F+ NAT YYDYII+GGGTAGCPLAATLSQ+ VLLLERGG PY PN+ + F
Sbjct: 41 FISNATDFASEDYYDYIIVGGGTAGCPLAATLSQSFRVLLLERGGVPYNRPNVMSHDGFL 100
Query: 94 AALSDLSS-TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVG--WDERL 150
L+D+++ SP+Q FISE+GV N+R RVLGG S +NAGFY+RA + G WD
Sbjct: 101 TTLTDVNNFDSPAQSFISEEGVPNARGRVLGGSSAINAGFYSRADKQFFENSGLVWDLSS 160
Query: 151 VNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQ 210
VN+SY+WVE+ + F P +R WQ+A+RD L+EVGV P+NGFT +H GTKIGG+ FD+ G+
Sbjct: 161 VNQSYEWVERAIVFRPQLRTWQTAIRDALLEVGVHPFNGFTLEHKVGTKIGGSTFDRTGR 220
Query: 211 RHTAADLLEYANPSGLTLLLHASVHKVLF----RIKGKARPVAHGVVFRDATGAKHRAYL 266
RH++ADLL YA S + + ++A+V +VL + G + A GVV+RD G H A +
Sbjct: 221 RHSSADLLRYARSSNIRVAVYATVERVLLASSPSVSG-SNVSAIGVVYRDQLGRFHHALI 279
Query: 267 KNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFV 318
++ + E+I+SAGALGSPQLL LSG I V LDQP VG + DNP N I +
Sbjct: 280 RD--RGEVILSAGALGSPQLLFLSGIGPRSYLSTWGIPVALDQPHVGDFVYDNPRNGISI 337
Query: 319 PSPVPVEVSLIQVVGITQFGSYIEAASGE-NFAGGSPSPRDYGMFSPKIGQLSKVPPKQR 377
PVP+E SLIQVVG+T+ G+++EAAS FA SP + P
Sbjct: 338 VPPVPMENSLIQVVGVTEDGAFLEAASNVIPFA------------SPLHSVFIRAPA--- 382
Query: 378 TPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPE 437
+P + I+EK++GPVS G L L + + NP V FNYF +P+
Sbjct: 383 SPLYVPVTT---------------IMEKILGPVSIGLLRLASTDVRINPVVRFNYFSDPQ 427
Query: 438 DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFC 497
DL+RCV G I +I+ S++ F AP LP + + FC
Sbjct: 428 DLERCVNGTRKIGEILRSRAMQDFMIREWFGNRRFRFVG-AP---LPVDQSNDLVMADFC 483
Query: 498 RDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMG 557
R TV TIWHYHGG VGKVVD D KV+GV++LR++DGSTF SPGTNPQAT+MMLGRYMG
Sbjct: 484 RRTVSTIWHYHGGAVVGKVVDSDLKVIGVNSLRLVDGSTFNISPGTNPQATLMMLGRYMG 543
Query: 558 VRILSERL 565
+++L ER+
Sbjct: 544 LKMLRERM 551
>sp|P52706|MDL1_PRUSE (R)-mandelonitrile lyase 1 OS=Prunus serotina GN=MDL1 PE=1 SV=1
Length = 563
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/560 (39%), Positives = 313/560 (55%), Gaps = 57/560 (10%)
Query: 21 HDFCACQKAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 80
HDF + F ++AT + YDY+I+GGGT+GCPLAATLS+ VL+LERG P
Sbjct: 34 HDFSYLR------FAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 87
Query: 81 YGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA--A 137
PN+ F L + +P +RF+SEDG+ N R RVLGG S +NAG Y RA +
Sbjct: 88 TAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYARANTS 147
Query: 138 PYYVREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYG 197
Y V WD LVN++Y+WVE + F+P + WQS +E GV P +GF+ DH G
Sbjct: 148 IYSASGVDWDMDLVNKTYEWVEDTIVFKPNYQPWQSVTGTAFLEAGVDPNHGFSLDHEAG 207
Query: 198 TKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 257
T+I G+ FD G RH A +LL N + L + +HASV K++F A GV++RD+
Sbjct: 208 TRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIF--SNAPGLTATGVIYRDS 265
Query: 258 TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMS 309
G HRA++++ K E+IVSAG +G+PQLL+LSG + NI VVL P VGQ +
Sbjct: 266 NGTPHRAFVRS--KGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLH 323
Query: 310 DNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQL 369
DNP N I + P P+E +++ V+GI+ +F S S +
Sbjct: 324 DNPRNFINILPPNPIEPTIVTVLGISN-----------DFYQCSFSSLPF---------- 362
Query: 370 SKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNPSV 428
PP P L + F KV GP+S G L L+ + N +P+V
Sbjct: 363 -TTPPFSFFPST-------SYPLPNSTF--AHFASKVAGPLSYGSLTLKSSSNVRVSPNV 412
Query: 429 TFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSN 488
FNY+ P DL CV G+ I +++ + + +K E + N+ LP+
Sbjct: 413 KFNYYSNPTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGIEGFNILGIP----LPKDQT 468
Query: 489 ASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQAT 548
+ E FCR++V + WHYHGGC VGKV+D D++V G+DALRV+DGSTF Y+P ++PQ
Sbjct: 469 DDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIDALRVVDGSTFPYTPASHPQGF 528
Query: 549 VMMLGRYMGVRILSERLASN 568
+MLGRY+G++IL ER AS+
Sbjct: 529 YLMLGRYVGIKILQERSASD 548
>sp|Q945K2|MDL2_PRUDU (R)-mandelonitrile lyase 2 OS=Prunus dulcis GN=MDL2 PE=1 SV=1
Length = 563
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 322/575 (56%), Gaps = 58/575 (10%)
Query: 6 LRLSFVATLATFLFFHDFCACQKAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATL 65
L+ S V +LAT HDF SF ++AT + YDY+I+GGGT+GCPLAATL
Sbjct: 20 LQYSEVHSLAT-TSDHDFSYL------SFAYDATDLELEGSYDYVIVGGGTSGCPLAATL 72
Query: 66 SQNASVLLLERGGSPYGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGG 124
S+ VL+LERG P PN+ F L + +P +RF+SEDG+ N R RVLGG
Sbjct: 73 SEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGG 132
Query: 125 GSCLNAGFYTRA--APYYVREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEV 182
S +NAG Y RA + Y V WD LVN++Y+WVE + ++P + WQS + +E
Sbjct: 133 TSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEA 192
Query: 183 GVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIK 242
GV P +GF+ DH GT+I G+ FD G RH A +LL N + L + +HASV K++F
Sbjct: 193 GVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIF--S 250
Query: 243 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHN 294
A GV++RD+ G H+A++++ K E+IVSAG +G+PQLL+LSG + N
Sbjct: 251 NAPGLTATGVIYRDSNGTPHQAFVRS--KGEVIVSAGTIGTPQLLLLSGVGPESYLSSLN 308
Query: 295 ITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSP 354
I VVL P VGQ + DNP N I + P P+E +++ V+GI+ +F S
Sbjct: 309 IPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISN-----------DFYQCSF 357
Query: 355 SPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGH 414
S + PP P A L + F KV GP+S G
Sbjct: 358 SSLPF-----------TTPPFGFFPSA-------SYPLPNSTF--AHFASKVAGPLSYGS 397
Query: 415 LELR-TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVN 473
L L+ + N +P+V FNY+ DL CV G+ I +++ + + +K E + N
Sbjct: 398 LTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFN 457
Query: 474 MTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVID 533
+ LP+ + E FCR++V + WHYHGGC VGKV+D D++V G++ALRV+D
Sbjct: 458 ILGIP----LPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVD 513
Query: 534 GSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 568
GSTF Y+P ++PQ +MLGRY+G++IL ER AS+
Sbjct: 514 GSTFPYTPASHPQGFYLMLGRYVGIKILQERSASD 548
>sp|P52707|MDL3_PRUSE (R)-mandelonitrile lyase 3 OS=Prunus serotina GN=MDL3 PE=2 SV=1
Length = 573
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 315/562 (56%), Gaps = 56/562 (9%)
Query: 21 HDFCACQKAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 80
HDF SF+++AT + YDYII+GGGTAGCPLAATLS N SVL+LERG P
Sbjct: 34 HDFSYL------SFVYDATDPELEGSYDYIIVGGGTAGCPLAATLSANYSVLVLERGSLP 87
Query: 81 YGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPY 139
PN+ F L + +P +RF+SEDG+ N R RVLGG S +NAG Y RA
Sbjct: 88 TEYPNLLISDGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYVRANTS 147
Query: 140 YVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYG 197
+ + G WD LVN++Y+WVE + FEP + WQ+ + +E G+LP NGF+ DH+ G
Sbjct: 148 FFNQTGIEWDMDLVNQTYEWVEDTIVFEPDSQTWQTVIGTAYLEAGILPNNGFSVDHLAG 207
Query: 198 TKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 257
T++ G+ FD NG RH + +LL +P+ L + + A+V K++F + A GV++ D+
Sbjct: 208 TRLTGSTFDNNGTRHASDELLNKGDPNNLRVAVQAAVEKIIFS-SNTSGVTAIGVIYTDS 266
Query: 258 TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMS 309
G H+A+++ + E+I+SAG +GSPQLL+LSG + NI+VV P VGQ +
Sbjct: 267 NGTTHQAFVRG--EGEVILSAGPIGSPQLLLLSGVGPESYLTSLNISVVASHPYVGQYIY 324
Query: 310 DNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQL 369
DNP N I + P P+E S + V+GIT +F S S +
Sbjct: 325 DNPRNFINILPPNPIEASTVTVLGITS-----------DFYQCSISSLPF---------- 363
Query: 370 SKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNPSV 428
PP P L + F I+ KV GP+S G + L + + P+V
Sbjct: 364 -DTPPFSFFPTT-------SYPLPNQTF--AHIVNKVPGPLSHGTVTLNSSSDVRVGPNV 413
Query: 429 TFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSN 488
FNY+ DL CV G+ + +++ + + +K E + N+ LP +
Sbjct: 414 KFNYYSNLTDLSHCVSGMKKLGEVLSTDALEPYKVEDLPGIDGFNILGIP----LPENQT 469
Query: 489 ASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQAT 548
+ E FCR++V + WHYHGGC VGKV+D ++V G++ALRV+DGSTF +P ++PQ
Sbjct: 470 DDAAFETFCRESVASYWHYHGGCLVGKVLDDGFRVTGINALRVVDGSTFPSTPASHPQGF 529
Query: 549 VMMLGRYMGVRILSERLASNDS 570
+MLGRYMG++IL ER AS D+
Sbjct: 530 YLMLGRYMGIQILQERSASEDA 551
>sp|O50048|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1
Length = 576
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/562 (39%), Positives = 317/562 (56%), Gaps = 56/562 (9%)
Query: 21 HDFCACQKAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 80
HDF + F+++A + YDYII+GGGTAGCPLAATLS N SVL+LERG P
Sbjct: 35 HDFSYLE------FVYDANDTELEGTYDYIIVGGGTAGCPLAATLSANYSVLVLERGTLP 88
Query: 81 YGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPY 139
PN+ F L + +P +RF+S DG+ N R RVLGG S +NAG Y RA
Sbjct: 89 TEYPNLLTSDGFIYNLQQEDDGQTPVERFVSGDGIDNVRGRVLGGTSMINAGVYVRANTS 148
Query: 140 YVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYG 197
+ + G WD LVN++Y WVE + F+P + WQ+ +EVG+LP NGF+ DH+ G
Sbjct: 149 FFNQTGIEWDMDLVNKTYDWVEDTIVFKPDFQFWQNLTGTAFLEVGILPDNGFSLDHLEG 208
Query: 198 TKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 257
T++ G+ FD NG RH + +LL +P+ L + +HA+V K++F + A GV++ D+
Sbjct: 209 TRLTGSTFDNNGTRHASDELLNKGDPNNLRVAVHAAVEKIIFS-SDSSGVTAIGVIYTDS 267
Query: 258 TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMS 309
G H+A+++ E+I+SAG +GSPQLL+LSG + NI+VV P VGQ +
Sbjct: 268 NGTTHQAFVRG--DGEVILSAGPIGSPQLLLLSGVGLESYLTSLNISVVASHPYVGQYIY 325
Query: 310 DNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQL 369
DNP N I + P P+E S + V+GIT Y + S F S +P +G F
Sbjct: 326 DNPRNFINILPPNPIEASTVTVLGITS-DFYQCSISSLPF---STAP--FGFF------- 372
Query: 370 SKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNPSV 428
P P L + F I+ KV GP+S G + L+ T + P+V
Sbjct: 373 ----PNPTYP------------LPNTTF--AHIVNKVPGPLSHGTVLLQSTSDVRVAPNV 414
Query: 429 TFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSN 488
TFNY+ DL CV G+ I + + S + +K E + ++ LP +
Sbjct: 415 TFNYYSNTTDLAHCVSGMKKIGEFLSSDALKPYKVEDLPGIEGFDILGIP----LPENQT 470
Query: 489 ASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQAT 548
+ E FCR+ V + WHYHGGC VG+V+D D++V G++ALRV+DGSTF +P ++PQ
Sbjct: 471 DDAAFETFCREAVASYWHYHGGCLVGEVLDDDFRVTGINALRVVDGSTFPSTPASHPQGF 530
Query: 549 VMMLGRYMGVRILSERLASNDS 570
+MLGRYMG +IL ERLAS ++
Sbjct: 531 YLMLGRYMGTKILQERLASEEA 552
>sp|O82784|MDL4_PRUSE (R)-mandelonitrile lyase 4 OS=Prunus serotina GN=MDL4 PE=2 SV=1
Length = 574
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/576 (38%), Positives = 313/576 (54%), Gaps = 56/576 (9%)
Query: 7 RLSFVATLATFLFFHDFCACQKAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLS 66
+ S V +LA HDF + F++NA + YDYII+GGGT+GCPLAATLS
Sbjct: 21 QYSEVHSLANTSSEHDFGYLK------FVYNAVDLELEGSYDYIIVGGGTSGCPLAATLS 74
Query: 67 QNASVLLLERGGSPYGNPNITNLGSFGAALSDLSS-TSPSQRFISEDGVINSRARVLGGG 125
N SVL+LERG PN + F L +P +RF+SEDG+ N R+R+LGG
Sbjct: 75 ANYSVLVLERGTIATEYPNTLTVDGFAYNLQQQDDGKTPVERFVSEDGIDNVRSRILGGT 134
Query: 126 SCLNAGFYTRAAPYYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVG 183
+ +NAG Y RA + G WD LVNE+Y+WVE + ++P + WQS +E G
Sbjct: 135 TIINAGVYARANESFYNNSGVEWDLDLVNEAYEWVEDAIVYKPSNQSWQSITGTAFLEAG 194
Query: 184 VLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKG 243
V P NGF H GT++ G+ FD +G RH + +LL +P L + + A+V K++F +
Sbjct: 195 VHPDNGFGLVHEEGTRLTGSTFDNSGTRHASDELLNKGDPDNLKVAVEAAVQKIIFSTES 254
Query: 244 KARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNI 295
A GVV+ D+ G HRA + K E+I+SAG LG+PQLL+LSG + NI
Sbjct: 255 SGL-TAVGVVYTDSNGTSHRALVSG--KGEVILSAGTLGTPQLLLLSGVGPESYLTSLNI 311
Query: 296 TVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPS 355
+VV P VGQ ++DNP N I + P P+E S + V+GIT +F S S
Sbjct: 312 SVVASHPYVGQYVNDNPRNFINILPPNPIEPSTVTVLGITS-----------DFYQCSLS 360
Query: 356 PRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHL 415
+ PP P L + F I+ KV GP+S G L
Sbjct: 361 SLPF-----------DTPPFSLFPTT-------SYPLPNQTF--AHIVSKVPGPLSAGSL 400
Query: 416 ELR-TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNM 474
L+ + N + P+V FNY +P DL CV G+ I + + + +K + + N+
Sbjct: 401 TLQSSSNVSVAPNVKFNYCSDPVDLTHCVSGMKKIGVFLSTDALKPYKVDDLPGIDGFNI 460
Query: 475 TASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDG 534
+ LP + + E+FCRDTV + WHYHGG VGKV+D +++V G++ALRV+DG
Sbjct: 461 LGTP----LPENQTDDAAFEKFCRDTVASYWHYHGGAIVGKVIDGNFRVTGINALRVVDG 516
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRILSERLASNDS 570
STF +P ++PQ +MLGRY+G +I+ ER AS ++
Sbjct: 517 STFPATPASHPQGFYLMLGRYVGTKIVQERSASGEA 552
>sp|O24243|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1
Length = 559
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 302/566 (53%), Gaps = 76/566 (13%)
Query: 21 HDFCACQKAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 80
HDF + F++NAT YDYI+IGGGT+GCPLAATLS+ VLLLERG
Sbjct: 34 HDFSYLK------FVYNATDTSLEGSYDYIVIGGGTSGCPLAATLSEKYKVLLLERGTIA 87
Query: 81 YGNPNITNLGSFGAALSDLSS-TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPY 139
PN F L +P +RF+SEDG+ N RAR+LGG + +NAG Y RA
Sbjct: 88 TEYPNTLTADGFAYNLQQQDDGKTPVERFVSEDGIDNVRARILGGTTIINAGVYARANIS 147
Query: 140 YVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYG 197
+ + G WD LVN++Y+WVE + +P + WQS + +G +E G+LP NGF+ DH G
Sbjct: 148 FYSQTGIEWDLDLVNKTYEWVEDAIVVKPNNQSWQSVIGEGFLEAGILPDNGFSLDHEAG 207
Query: 198 TKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 257
T++ G+ FD NG RH A +LL +P+ L + + ASV K+LF + A GV++ D+
Sbjct: 208 TRLTGSTFDNNGTRHAADELLNKGDPNNLLVAVQASVEKILFS-SNTSNLSAIGVIYTDS 266
Query: 258 TGAKHRAYLK-NGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGM 308
G H+A+++ NG E+IVSAG +G+PQLL+LSG + NITVV P VGQ +
Sbjct: 267 DGNSHQAFVRGNG---EVIVSAGTIGTPQLLLLSGVGPESYLSSLNITVVQPNPYVGQFL 323
Query: 309 SDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQ 368
+NP N I P P+E S++ V+GI DY S
Sbjct: 324 YNNPRNFINNFPPNPIEASVVTVLGIRS---------------------DYYQVSLSSLP 362
Query: 369 LSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNPS 427
S PP P L + F I+ +V GP+S G + L + + P+
Sbjct: 363 FS-TPPFSLFPTT-------SYPLPNSTF--AHIVSQVPGPLSHGSVTLNSSSDVRIAPN 412
Query: 428 VTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFK---------YESMSVPILVNMTASA 478
+ FNY+ DL CV G+ + ++ +K+ +K + + VP
Sbjct: 413 IKFNYYSNSTDLANCVSGMKKLGDLLRTKALEPYKARDVLGIDGFNYLGVP--------- 463
Query: 479 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFY 538
LP + S E FC D V + WHYHGG VGKV+D ++V+G+ ALRV+D STF
Sbjct: 464 ----LPENQTDDASFETFCLDNVASYWHYHGGSLVGKVLDDSFRVMGIKALRVVDASTFP 519
Query: 539 YSPGTNPQATVMMLGRYMGVRILSER 564
Y P ++PQ +MLGRY+G++IL ER
Sbjct: 520 YEPNSHPQGFYLMLGRYVGLQILQER 545
>sp|B2JS89|BETA_BURP8 Choline dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=betA PE=3 SV=1
Length = 572
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 152/571 (26%), Positives = 238/571 (41%), Gaps = 101/571 (17%)
Query: 47 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYIIIG G+AG LA L+++ +VLLLE GG Y T + AAL+
Sbjct: 6 YDYIIIGAGSAGNVLATRLTEDRDVTVLLLEAGGPDYRFDFRTQMP---AALAYPLQGRR 62
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQ 156
+ + + + F++ + R + LGG S +N Y R + GW ER E++
Sbjct: 63 YNWAYETDPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNA--LDYDGWAERKGLENWT 120
Query: 157 WVEKVVAFEPPMRQWQSA---------------------VRDGLVEVGVLPYNGFTYDHM 195
+++ + F + A + + +VE GV T D
Sbjct: 121 YLDCLPYFRKAETRDAGANDYHGGDGPVHVTTSKRGVNPLFEAMVEAGVQAGYPRTDDLN 180
Query: 196 YGTKIGGTIFDQ----NGQR-HTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARPVA 249
+ G D+ NG+R TA L+ A P LT++ +A+ ++LF K A
Sbjct: 181 GYQQEGFGPMDRTVTANGRRASTARGYLDQARPRPNLTIVTYATTDRILFSGK-----RA 235
Query: 250 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITVVLDQ 301
GVV+ D +A + + E+++ +GA+ SPQ+L SG +I VVLD
Sbjct: 236 QGVVYLDG-----QAQITAHARREVLLCSGAIASPQILQRSGVGPGGWLRDLDIPVVLDL 290
Query: 302 PLVGQGMSDN-PMNAIF-VPSPVPVEVSLI----QVVGITQF--GSYIEAASGENFAGGS 353
P VGQ + D+ M + PV + +L+ +GI G+ I AS AGG
Sbjct: 291 PGVGQNLQDHLEMYMQYECKEPVSLYPALLLRNQPAIGIEWMLKGTGI-GASNHFEAGGF 349
Query: 354 PSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTG 413
RD + P I Q +P +A A+ F+ M S G
Sbjct: 350 IRTRDDDPW-PNI-QYHFLP--------VAINYNGTNAIKMHGFQAHV---GSMRSPSRG 396
Query: 414 HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVN 473
++LR+R+P ++PS+ FNY E D + I +II + +F+ +S +
Sbjct: 397 RVKLRSRDPREHPSILFNYMAEALDWREFRDAIRITREIIAQPALDRFRGRELSPGAELQ 456
Query: 474 MTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDAL 529
A ++ F R T +H C +G VVD + +V G++ L
Sbjct: 457 SDA---------------QIDAFVRARAETAYHPSCSCAMGYDDMAVVDGEGRVHGLEGL 501
Query: 530 RVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
RV+D S N A +ML + RI
Sbjct: 502 RVVDASIMPRITTGNLNAPTIMLAEKIADRI 532
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 158/572 (27%), Positives = 234/572 (40%), Gaps = 118/572 (20%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGS--------PYGNPNITNLGSFGAAL 96
YDYII+G G+AGC LA LS + S V LLE G P G ++N A
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 97 SDLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQ 156
T+P Q+ ++E + R + LGG S +NA Y R + W E+ E +
Sbjct: 62 Q----TAP-QQHLNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQ--AW-EQAGGEYWG 113
Query: 157 WVEKVVAF---EPPMRQWQS---------AVRD---------GLVEVGV---LPYNG-FT 191
W F E R +S AV D V+ G+ + +NG F
Sbjct: 114 WKRAFALFKKLEHNQRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFN 173
Query: 192 YDHMYGTKIGGTIFDQNGQRHTAA-----DLLEYANPSGLTLLLHASVHKVLFRIKGKAR 246
H G + ++GQR ++A D+++ N L ++ A KVLF +
Sbjct: 174 GAHQEGVGFY-QVTQKHGQRWSSARAFLHDVIDRPN---LDIITEAHATKVLFEDRK--- 226
Query: 247 PVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGA--------HNITVV 298
A GV + + +K E+I+S GA+ +PQLLMLSG H I +V
Sbjct: 227 --AVGVSYIQKNMHQQ---VKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALV 281
Query: 299 LDQPLVGQGMSDNP----MNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSP 354
D P VG+ + D+ M A +P+ V S I G+ SYI G + +
Sbjct: 282 HDLPEVGKNLQDHLDITLMCAANSRTPIGVAFSFIPR-GLVGLFSYIFKRKGFLTSNVAE 340
Query: 355 SPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDP----AFRGGFILEKV-MGP 409
S G K P++ P + L D A G+ L + P
Sbjct: 341 S-----------GGFVKSSPERDRPNLQFHFLPTY--LKDHGRKIAVGYGYTLHICDLLP 387
Query: 410 VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSK-FKYESMSV 468
S G + L++ NP D+P + NY +PED++ + GI I ++ S +K FK E +
Sbjct: 388 KSRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKHFKREIVPG 447
Query: 469 PILVNMTASAPVNLLPRHSNASTSLEQFC---RDTVMTIWHYHGGCQVGK----VVDHDY 521
P A TS ++ R TI+H G C++GK VVD
Sbjct: 448 P-------------------AVTSDDEIVADIRSRAETIYHPVGTCRMGKDPASVVDPCL 488
Query: 522 KVLGVDALRVIDGSTFYYSPGTNPQATVMMLG 553
+V G+ +RV+D S N A +M+
Sbjct: 489 QVRGLRNIRVVDASIMPNLVAGNTNAPTIMIA 520
>sp|Q6FDF9|BETA_ACIAD Choline dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betA
PE=3 SV=1
Length = 553
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 149/574 (25%), Positives = 238/574 (41%), Gaps = 104/574 (18%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS------- 97
+DYIIIG G+AG LAA L+++A SVLLLE GG Y + AAL+
Sbjct: 6 FDYIIIGAGSAGNVLAARLTEDADVSVLLLEAGGPDY---RLDFRTQMPAALAYPLQGRR 62
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-------------------- 136
+ + + + ++ + R + LGG S +N Y R
Sbjct: 63 YNWAYLTEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEGWSKLKGLENWTYA 122
Query: 137 --APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGF 190
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 123 DCLPYYKKAETRDIGGND------YHGDHGPVSVATP-KDNNNVLFHAMVEAGVQAGYPR 175
Query: 191 TYDHMYGTKIGG-----TIFDQNGQRH-TAADLLEYANPS-GLTLLLHASVHKVLFRIKG 243
T D + G + G +NG+R TA L+ A LT++ HA +K+LF K
Sbjct: 176 T-DDLNGYQQEGFGPMDRTVTKNGRRSSTARGYLDMAKERPNLTIITHAMTNKILFNGK- 233
Query: 244 KARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNI 295
A GV + GA R K E+++ AGA+ SPQ+L SG + +I
Sbjct: 234 ----QAIGVEY--IQGADKRDLKKVMANKEVLLCAGAIASPQILQRSGVGESTFLKSMDI 287
Query: 296 TVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FAG-- 351
VV D P VG+ + D+ +++ VSL + Y + A G F G
Sbjct: 288 DVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFLGKG 340
Query: 352 -GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV 410
G+ + + G F + + P Q +A A+ + F+ M
Sbjct: 341 IGASNQFEAGGFIRSSDEF-EWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRSP 396
Query: 411 STGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPI 470
S GH++L++++P ++PS+ FNY +D Q I +I+ + ++ E +S
Sbjct: 397 SRGHIKLKSKDPFEHPSILFNYMSTEQDWQEFRAAIRITREIMHQPALDPYRGEEIS--- 453
Query: 471 LVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGV 526
P L + T L+ F R+ T +H C++G+ VVDH +V G+
Sbjct: 454 --------PGKQL----STDTQLDDFVRNHAETAYHPSCSCKMGEDDMAVVDHQGRVHGL 501
Query: 527 DALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
LRV+D S N AT +M+ + +I
Sbjct: 502 QGLRVVDASIMPLIITGNLNATTIMMAEKIADQI 535
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 151/577 (26%), Positives = 226/577 (39%), Gaps = 127/577 (22%)
Query: 44 VSYYDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGS--------PYGNPNITNLGSFG 93
S +DYI++GGG+AGC LAA LS+N S V L+E G P G +T G
Sbjct: 2 TSGFDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTT----G 57
Query: 94 AALSDLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVRE--VGWD 147
DL T P Q+ + + + R+LGGGS +NA +TR P + E GW
Sbjct: 58 PHTWDL-LTEP-QKHANNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWS 115
Query: 148 ERLVNESY-----------QW--------VEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN 188
R V + + W V + P R + + + E+G LPYN
Sbjct: 116 FRDVQKYFIRSEGNAVFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQ----EMG-LPYN 170
Query: 189 -GFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYA-NPSGLTLLLHASVHKVLFRIKGKAR 246
F G I N + TA L A LT++ A V K++F
Sbjct: 171 PDFNGASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVF------- 223
Query: 247 PVAHGVVFRDATGAKHRAYLKNGPKN------EIIVSAGALGSPQLLMLSG----AH--- 293
+ T A Y+ NG N EI+V+AGA+G+P+L+MLSG AH
Sbjct: 224 ---------NGTRATGVQYIANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRE 274
Query: 294 -NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGG 352
I VV D P VG+ + D+ V ++ + + +AG
Sbjct: 275 NGIPVVQDLPGVGENLQDH------------FGVDIVAELKTDESFDKYRKLHWMLWAG- 321
Query: 353 SPSPRDYGMFSP--------KIGQLSKVPPKQRTPEA----IAEAIENMKALDDPAFRGG 400
+Y MF + G P P+ +AEA P G
Sbjct: 322 ----LEYTMFRSGPVASNVVEGGAFWYSDPSSGVPDLQFHFLAEAGAEAGVTSVPKGASG 377
Query: 401 FILEK-VMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 459
L V+ P S G + LR+ +P NP V N+ +P DL+ +G+ ++ S
Sbjct: 378 ITLNSYVLRPKSRGTVRLRSADPRVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLE 437
Query: 460 KFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK---- 515
K ++ + P + R + R+ T +H C++G+
Sbjct: 438 KHIRKT------CFFSGKQPTMQMYR---------DYAREHGRTSYHPTCTCKMGRDDMS 482
Query: 516 VVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML 552
VVD KV G++ +R+ D S G+N A +M+
Sbjct: 483 VVDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIMI 519
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 233/564 (41%), Gaps = 104/564 (18%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERG--------GSPYGNPNITNLGSFGAAL 96
YDYII+G G+AGC LA LS + S V LLE G P G ++N A
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 97 SDLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP--YYV------REVGW-- 146
T+P Q ++ + R + LGG S +NA Y R Y+ R GW
Sbjct: 62 Q----TAPQQN-LNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYR 116
Query: 147 ----------DERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGV---LPYNGFTYD 193
++R + V+ +A ++ + + V+ G+ + +NG ++
Sbjct: 117 ALELFKRLECNQRFDKSEHHGVDGELAVSD--LKYINPLSKAFVQAGMEANINFNG-DFN 173
Query: 194 HMYGTKIGG-TIFDQNGQRHTAADLLEYANPS--GLTLLLHASVHKVLFRIKGKARPVAH 250
Y +G + +NGQR ++A + S L ++ A K+LF + A
Sbjct: 174 GEYQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFEDRK-----AV 228
Query: 251 GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGA--------HNITVVLDQP 302
GV + H+ +G E+++S GA+G+P LLMLSG H +++V D P
Sbjct: 229 GVSYIKKN-MHHQVKTTSG--GEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLP 285
Query: 303 LVGQGMSDNP----MNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRD 358
VG+ + D+ M A P+ V +S I G++ SY+ G + + S
Sbjct: 286 EVGKNLQDHLDITLMCAANSREPIGVALSFIPR-GVSGLFSYVFKREGFLTSNVAES--- 341
Query: 359 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGF-----ILEKVMGPVSTG 413
G K P + P + GG+ I + + P S G
Sbjct: 342 --------GGFVKSSPDRDRPNLQFHFLPTYLKDHGRKIAGGYGYTLHICDLL--PKSRG 391
Query: 414 HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSK-FKYESMSVPILV 472
+ L++ NP P + NY + ED++ + GI I+++ S +K FK+E VP
Sbjct: 392 RIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMAKHFKHE--VVPGQA 449
Query: 473 NMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDA 528
T + + R + TI+H G C++GK VVD K+ G+
Sbjct: 450 VKTDDEIIEDIRRRAE--------------TIYHPVGTCRMGKDPASVVDPCLKIRGLAN 495
Query: 529 LRVIDGSTFYYSPGTNPQATVMML 552
+RV+D S + N A +M+
Sbjct: 496 IRVVDASIMPHLVAGNTNAPTIMI 519
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 148/596 (24%), Positives = 246/596 (41%), Gaps = 103/596 (17%)
Query: 41 AQPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGS-PYGNPNITNLGSFGAALS 97
++P YD+I+IGGG+AG +A+ LS+ VLL+E GG P G + +F +
Sbjct: 59 SEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDI 118
Query: 98 DLSSTSPSQRFIS----EDGVINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWD 147
D + +R E R +VLGG S +N Y R + GW
Sbjct: 119 DYRYNTEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWS 178
Query: 148 ERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNG-FTYDHMY-GTKIGGTIF 205
+ V ++ E + + ++ + + GL+ VG PYN +Y + G ++G ++
Sbjct: 179 YQDVLPFFKKSEDNLELDAVGTEYHA--KGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQ 236
Query: 206 DQNGQ--------RHTAADLLEYANP----------SGLTLLLHASVHKVLFRIKGKARP 247
D NGQ + TA + + Y++ + L +LL+ +V KVL K
Sbjct: 237 DLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKN-- 294
Query: 248 VAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITVVL 299
GV D G+ + +K E+IVS GA+ SPQ+L+LSG N+ V
Sbjct: 295 -VVGVEVSDQFGSMRKILVKK----EVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVH 349
Query: 300 DQPLVGQGMSDN---------------PMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAA 344
P VG+ + ++ P+N + L+ GI+ + A
Sbjct: 350 HLPGVGKNLHNHVAYFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISD----VTAK 405
Query: 345 SGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILE 404
+A P+ D ++ G L+ + E ++ N +A+ I
Sbjct: 406 MATRWA-DRPNLPDLQLYFG--GYLASCARTGQVGELLS---NNSRAIQ--------IFP 451
Query: 405 KVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYE 464
V+ P S G++ LR+ +P D P + NY + D++ V+GI ++ ++ S K
Sbjct: 452 AVLNPKSRGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLSQT---SPLKQY 508
Query: 465 SMSVPILVNMTASAPVNLLPRHSNASTS-LEQFCRDTVMTIWHYHGGCQVG------KVV 517
M + V V H+ AS + E R H G C++G VV
Sbjct: 509 GMRLDKTV-------VKGCESHAFASDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVV 561
Query: 518 DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML---GRYMGVRILSERLASNDS 570
+H+ +V GV LRV+D S N A +M+ G Y+ R ++ D+
Sbjct: 562 NHELRVHGVRGLRVMDTSIMPKVTAGNTHAPAVMIAEKGAYLLKRAWGAKVURVDA 617
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 139/571 (24%), Positives = 234/571 (40%), Gaps = 101/571 (17%)
Query: 48 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS----DLSS 101
DY+I+G G+AG +A LS++ SV+++E GGS +G P I + +S +
Sbjct: 4 DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFG-PFIQMPAALAWPMSMKRYNWGY 62
Query: 102 TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVREVGWDE------------ 148
S + + + R +V+GG S +N Y R A + R W+E
Sbjct: 63 LSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNR---WEELGAQGWAYADVL 119
Query: 149 ---RLVNESYQWVEKVVAFEPPMRQWQSAVRDGL----VEVGVLPYNGFTYDHMYGTKIG 201
+ + S+ E + P+ + V + L ++ G T D+ + G
Sbjct: 120 PYFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEG 179
Query: 202 GTIFDQ---NGQRHTAAD-LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 257
+ +Q NG+R +AA+ L+ A G L++ KV+ G+A V R
Sbjct: 180 FGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNGFARKVIIE-NGRAVGVEIERRGRVE 238
Query: 258 TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG----AH----NITVVLDQPLVGQGMS 309
T +R E+IVSA + SP+LLMLSG AH I V D+P VG +
Sbjct: 239 TVKANR---------EVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQ 289
Query: 310 DNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENF---AGGSPSPRDYGMFSPKI 366
D+ M F +VS V + + + +G + GG + + +
Sbjct: 290 DH-MEFYFQ------QVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQF-----EA 337
Query: 367 GQLSKVPPKQRTPE------AIAEAIENMKALDDPAFRG--GFILEKVMGPVSTGHLELR 418
+ P + P+ +A + + A F+ G+ L K S G++ LR
Sbjct: 338 CAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSK-----SRGNVTLR 392
Query: 419 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 478
+ +P+D+P + FNY PED ++ + +I K+F F+
Sbjct: 393 SADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFR---------------G 437
Query: 479 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDALRVI 532
P + ++ F R+ + + +H G C++G VVD + +V+GV+ LRV
Sbjct: 438 PEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVA 497
Query: 533 DGSTFYYSPGTNPQATVMMLGRYMGVRILSE 563
D S F + N +M G IL +
Sbjct: 498 DSSIFPHVTYGNLNGPSIMTGEKAADHILGK 528
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 222/567 (39%), Gaps = 97/567 (17%)
Query: 48 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYG----NPNITNLGSFGAALSDLSS 101
D++IIG G+AG +A LS++ SV+++E GGS G P+ ++ +L D
Sbjct: 5 DFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSI-PLNMSLYDWGF 63
Query: 102 TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVRE--VGWDERLVNESY 155
S + + + R +V+GG S +N Y R ++ E GW V +
Sbjct: 64 ASEPEPHLGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFADVLPYF 123
Query: 156 QWVEKVVAFEPPMR------QWQSAVRD-----GLVEVGVLPYNGFTYDHMYGTKIGGTI 204
+ +E E R Q R VE G T D+ + G
Sbjct: 124 KRMEDNDGGEDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNGSKQEGFGP 183
Query: 205 FDQN---GQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAK 261
+Q G+R +AA Y P A K + +KG AR V + + A G +
Sbjct: 184 MEQTISGGRRWSAASA--YLKP--------ALKRKNVSLVKGFARRVI--IENQRAIGVE 231
Query: 262 ---HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSD 310
H+ + E+IV+A ++ SP++LMLSG + I VV D+P VG+ + D
Sbjct: 232 IEAHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQD 291
Query: 311 NPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDY----------G 360
+ I S P+ ++ + + F + A F G + + G
Sbjct: 292 HMELYIQQESTKPITLNSV----LNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRAG 347
Query: 361 MFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTR 420
+ P I Q +P R A +A P M S G + LR+
Sbjct: 348 VDYPDI-QYHFIPAAVRYDGKAAAKSHGFQAHVGP-----------MRSKSRGSVTLRSP 395
Query: 421 NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 480
+P P + FNY P+D I +I +F F+ + +S P
Sbjct: 396 DPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQEIS-----------PG 444
Query: 481 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDALRVIDG 534
+ H + L+ F RD + +H G C++G+ VVD + +V+GVD LRV D
Sbjct: 445 S----HVQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRVADS 500
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRIL 561
S F N A +M G IL
Sbjct: 501 SIFPRVTNGNLNAPSIMTGEKASDHIL 527
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 235/577 (40%), Gaps = 107/577 (18%)
Query: 45 SYYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS----- 97
S YDYIIIG G+AG LAA L+++A +VLLLE GG Y + AAL+
Sbjct: 5 SEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDY---RLDFRTQMPAALAFPLQG 61
Query: 98 ---DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA------------------ 136
+ + + + ++ + R + LGG S +N Y R
Sbjct: 62 RRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLEDWS 121
Query: 137 ----APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN 188
PY+ R++G ++ E V K A P+ +VE GV
Sbjct: 122 YLDCLPYFRKAETRDIGPNDYHGGEGPVSVTKPKAGNNPLFH-------AMVEAGV--QA 172
Query: 189 GF-TYDHMYGTKIGG-----TIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFR 240
GF D + G + G NG+R + A L E S LT++ HA ++LF
Sbjct: 173 GFPRTDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE 232
Query: 241 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH------- 293
K +A VA+ V D T + RA + E+++ GA+ SPQ+L SG
Sbjct: 233 GK-RAVGVAYLVGDSD-TRIQARA------RKEVLLCGGAIASPQILQRSGVGPAEVLNK 284
Query: 294 -NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 350
+I VV D P VGQ + D+ + PV + + + A G F
Sbjct: 285 LDIPVVHDLPGVGQNLQDHLEMYLQYACTQPVSL-------YPSLKWWNQPAIGAKWMFL 337
Query: 351 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
G G+ + + G F + + + P Q +A K + + F+ M
Sbjct: 338 GTGIGASNQFEAGGFI-RSSEAFEWPNIQYHFLPVAINYNGTKGVQEHGFQAHV---GSM 393
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
S G +++++++P + PS+ FNY +D Q GI +I++ + ++ +S
Sbjct: 394 RSPSRGRVQVKSKDPREYPSILFNYMSSEQDWQEFRDGIRLTREIMQQPALDPYRGREIS 453
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 523
I V + +L+QF R+ T +H C++G VVD +V
Sbjct: 454 PGIDV---------------QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRV 498
Query: 524 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
G+ +LRV+D S N A +M+ + +I
Sbjct: 499 HGLQSLRVVDASIMPIITTGNLNAPTIMIAEKIADKI 535
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 237/572 (41%), Gaps = 97/572 (16%)
Query: 45 SYYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS----- 97
S YDYIIIG G+AG LAA L+++A +VLLLE GG Y + AAL+
Sbjct: 5 SEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDY---RLDFRTQMPAALAFPLQG 61
Query: 98 ---DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNES 154
+ + + + ++ + R + LGG S +N Y R + GW + E
Sbjct: 62 RRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNA--MDYDGWAKEPGLED 119
Query: 155 YQWVEKVVAF----------------EPPM-----RQWQSAVRDGLVEVGVLPYNGF-TY 192
+ +++ + F E P+ + + + +VE GV GF
Sbjct: 120 WSYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGV--QAGFPRT 177
Query: 193 DHMYGTKIGG-----TIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFRIKGKA 245
D + G + G NG+R + A L E S LT++ HA ++LF K +A
Sbjct: 178 DDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFEGK-RA 236
Query: 246 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITV 297
VA+ V D T + RA + E+++ GA+ SPQ+L SG +I V
Sbjct: 237 VGVAYLVGDSD-TRIQARA------RKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPV 289
Query: 298 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FAG---G 352
V D P VGQ + D+ + PV + + + A G F G G
Sbjct: 290 VHDLPGVGQNLQDHLEMYLQYACTQPVSL-------YPSLKWWNQPAIGAEWMFLGTGIG 342
Query: 353 SPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVST 412
+ + + G F + + + P Q +A K + + F+ M S
Sbjct: 343 ASNQFEAGGFI-RSSEAFEWPNIQYHFLPVAINYNGTKGVQEHGFQAHV---GSMRSPSR 398
Query: 413 GHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILV 472
G +++++++P + PS+ FNY +D Q GI +I++ + ++ +S I V
Sbjct: 399 GRVQVKSKDPREYPSILFNYMASEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDV 458
Query: 473 NMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDA 528
+ +L+QF R+ T +H C++G VVD +V G+ +
Sbjct: 459 ---------------QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQS 503
Query: 529 LRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
LRV+D S N A +M+ + +I
Sbjct: 504 LRVVDASIMPIITTGNLNAPTIMIAEKIADKI 535
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 144/567 (25%), Positives = 220/567 (38%), Gaps = 105/567 (18%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERG------GSPYGNPNITNLGSFGAALSD 98
Y Y+++G G+AGC LA L+++ + VLLLE G GS + I + A L D
Sbjct: 41 YSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLCD 100
Query: 99 ----LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVR-----EVGWDE 148
+ QR + + R RV GG S LNA Y R A Y R GWD
Sbjct: 101 DRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWD- 159
Query: 149 RLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNG-FTYDHMYGTKIGG----- 202
+ K E +++ A DG + V N + T+ G
Sbjct: 160 --YAHCLPYFRKAQGHELGASRYRGA--DGPLRVSRGKTNHPLHCAFLEATQQAGYPLTE 215
Query: 203 --TIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGA 260
F Q G + E S LH ++ + +K +A + V+F + T A
Sbjct: 216 DMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRT--NLKAEAETLVSRVLF-EGTRA 272
Query: 261 KHRAYLKNGPKN------EIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLVGQ 306
Y+KNG + E+I+S GA+ SPQLLMLSG N I VV P VGQ
Sbjct: 273 VGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQ 332
Query: 307 GMSDNPMNAIFVPSPVPVEVSLIQ------VVGITQFGSYI-EAASGENFAGG------- 352
+ D+ I P+ + Q +G+ + E A+ GG
Sbjct: 333 NLQDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGGFIRSQPG 392
Query: 353 SPSPRDYGMFSP-KIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVS 411
P P F P ++ +VP +Q EA + M+ S
Sbjct: 393 VPHPDIQFHFLPSQVIDHGRVPTQQ---EAYQVHVGPMRG------------------TS 431
Query: 412 TGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPIL 471
G L+LR+ NP D+P + NY D++ + +I ++ + F+ + +
Sbjct: 432 VGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALAPFRGKELQ---- 487
Query: 472 VNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLG 525
P + H + ++ F R + +H C++G+ VVD +VLG
Sbjct: 488 -------PGS----HIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLG 536
Query: 526 VDALRVIDGSTFYYSPGTNPQATVMML 552
V+ LRV+D S N A +M+
Sbjct: 537 VENLRVVDASIMPSMVSGNLNAPTIMI 563
>sp|Q9X2M2|BETA_STAXY Choline dehydrogenase OS=Staphylococcus xylosus GN=betA PE=3 SV=1
Length = 560
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 229/568 (40%), Gaps = 109/568 (19%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 99
YDYIIIGGG+AG L LS++ S VL+LE G S Y + + + G L D
Sbjct: 5 YDYIIIGGGSAGSVLGGRLSEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNKLYDW 64
Query: 100 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 159
+ + + V ++R +VLGG S +N Y R P + W + ES+ +
Sbjct: 65 IYETTPEPHMDGRKVGHARGKVLGGSSSINGMIYQRGNPMDYEK--WAKPEGMESWDYAH 122
Query: 160 KVVAFE-----------PPMRQWQSAVR---------------DGLVEVG---VLPYNGF 190
+ F+ P R ++ D VE G NGF
Sbjct: 123 CLPYFKRLETTFGSKKGDPYRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNKTPDVNGF 182
Query: 191 TYDHMYGTKIGGTIFD---QNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARP 247
+ G FD NG+R +A+ Y +P+ L + ++ +
Sbjct: 183 RQE-------GFGPFDSQVHNGRRVSASRA--YLHPAMKRKNLEVQTRAFVTKLNFEGNK 233
Query: 248 VAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITVVL 299
V GV F+ G +H K E+I+S GA+ SPQLL LSG + I +
Sbjct: 234 VT-GVTFK-KNGKEHTESAK-----EVILSGGAINSPQLLQLSGIGDSEHLRSLGIEPRI 286
Query: 300 DQPLVGQGMSDNPMNAIFV----PSPVPVEVSLIQV----VGITQFGSYIEAASGENFAG 351
P VG+ D+ ++V PV ++ SL ++ +G+ AA+ +F G
Sbjct: 287 HLPGVGENFEDHL--EVYVQHACKQPVSMQPSLNKLKMPFIGLQWILGRKGAAASNHFEG 344
Query: 352 GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVS 411
G + + P + +P IA + KA PA G + M S
Sbjct: 345 GGFVRSNDDVDYPNL-MFHFLP--------IAVRYDGTKA---PAAHGYQVHVGPMYSNS 392
Query: 412 TGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPIL 471
GHL++++++P + P FNY ED + V+ I I++ K+ F +S P
Sbjct: 393 RGHLKIKSKDPFEKPEFVFNYLSTEEDKREWVEAIKVARNILKQKALDPFNGGEIS-PGP 451
Query: 472 VNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHD-YKVL 524
T + + R + T+L C C++G VVD + +KV
Sbjct: 452 EVQTDEEIIEWVKR--DGETALHPSC------------SCRMGPASDEMSVVDPETFKVH 497
Query: 525 GVDALRVIDGSTFYYSPGTNPQATVMML 552
G++ LRV+D S + N + V+M+
Sbjct: 498 GMENLRVVDASVMPRTTNGNIHSPVLMM 525
>sp|A6T613|BETA_KLEP7 Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
Length = 554
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 143/570 (25%), Positives = 228/570 (40%), Gaps = 105/570 (18%)
Query: 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 98
+DYIIIG G+AG LA L++ N +VLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 62
Query: 99 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA---------------------- 136
T P + +++ + R + LGG S +N Y R
Sbjct: 63 AYETEP-EPYMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEHWSYLDC 121
Query: 137 APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTY 192
PYY R++G ++ Y + V+ P + + + + +VE GV T
Sbjct: 122 LPYYRKAETRDIGPND------YHGGDGPVSVTTP-KPGNNPLFEAMVEAGVQAGYPRT- 173
Query: 193 DHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKA 245
D + G + G T+ Q + TA L+ A LT+ HA ++F K
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIFAGK--- 230
Query: 246 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITV 297
A GV + + N E+++ AGA+ SPQ+L SG N I V
Sbjct: 231 --RAVGVEWLEGESTIPSKATAN---KEVLLCAGAIASPQILQRSGVGNPELLRQFDIPV 285
Query: 298 VLDQPLVGQGMSDNPMNAIFVPSPVPVEV-------SLIQVVGITQFGSYIEAASGENFA 350
V D P VG+ + D+ + PV + + ++ FG AS + A
Sbjct: 286 VHDLPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEA 345
Query: 351 GGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV 410
GG R + P I Q +P +A A+ + F+ M
Sbjct: 346 GGFIRSRAEFAW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQCHV---GSMRSP 392
Query: 411 STGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPI 470
S GH+ L++R+P+ +P++ FNY +D Q I +I+ + K++ +S I
Sbjct: 393 SRGHVRLKSRDPHAHPAILFNYMSHEQDWQEFRDAIRITREIMNQPALDKYRGREISPGI 452
Query: 471 LVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGV 526
+ L++F R+ T +H G C++G VVD + +V G+
Sbjct: 453 ---------------ECQSDAELDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVHGL 497
Query: 527 DALRVIDGSTFYYSPGTNPQATVMMLGRYM 556
+ LRV+D S N AT +M+G M
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKM 527
>sp|Q8PPG8|BETA_XANAC Choline dehydrogenase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=betA PE=3 SV=1
Length = 556
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 224/567 (39%), Gaps = 91/567 (16%)
Query: 47 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDY---RVDFRTQMPAALAFPLQGRR 61
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 149
+ + + + ++ + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYR 121
Query: 150 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLP-------YNG 189
V Y + V+ P + + +VE GV NG
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGDGPVSVATPKND-NNVLFHAMVEAGVQAGYPRTGDLNG 180
Query: 190 FTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPV 248
+ + + T+ + + TA L+ A P GL ++ HA+ ++LF GK
Sbjct: 181 YQQEGF--GPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRAIG 236
Query: 249 AHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLD 300
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 237 VHYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHD 290
Query: 301 QPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPR 357
P VGQ + D+ +++ VSL + Q+ + + FAG G+ +
Sbjct: 291 LPGVGQNLQDHL--EVYIQYACTKPVSLYPAL---QWWNQPAIGAQWLFAGTGTGASNQF 345
Query: 358 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 417
+ G F + + P Q +A A+ + F+ M S G +
Sbjct: 346 EAGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHA 401
Query: 418 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 477
++R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 402 KSRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDAYRGREISPSADCKTDA- 460
Query: 478 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVID 533
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 --------------ELDAFVRSRAETAYHPSCSCAMGTDAMAVVDGQGRVHGMEGLRVID 506
Query: 534 GSTFYYSPGTNPQATVMMLGRYMGVRI 560
S N AT +M+ + R+
Sbjct: 507 ASIMPRIITGNLNATTIMIAEKIADRV 533
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 147/583 (25%), Positives = 228/583 (39%), Gaps = 116/583 (19%)
Query: 46 YYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-DLSST 102
+YDYII+G G+AGC LA LS++ SVLLLE GGS + + ALS ++S
Sbjct: 4 HYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGS-----DKSIFIQMPTALSYPMNSE 58
Query: 103 SPSQRFISE-----DG--VINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWDER 149
+ +F ++ DG + R +VLGG S +N Y R E GW+ +
Sbjct: 59 KYAWQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQ 118
Query: 150 LVNESYQWVEKVVAFEPPMRQWQS-----------------AVRDGLVEVG---VLPYNG 189
++ E + E R A D E G YNG
Sbjct: 119 ACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNG 178
Query: 190 FTYD-----HMYGTKIGGTIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFRIK 242
+ + HM T+ +NG R + ++ L S L+ V ++L K
Sbjct: 179 YQQEGFGPMHM-------TV--KNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK 229
Query: 243 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHN 294
A GV F + G + KNE+I SAG++GS QLL LSG
Sbjct: 230 -----RAVGVEF-ELAGELRTCF----AKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAG 279
Query: 295 ITVVLDQPLVGQGMSDNPMNAIF---VPSPVPVEVSLIQ----VVGITQFGSYIEAASGE 347
+T V P VGQ + D+ + F P+ + L ++G + +
Sbjct: 280 VTPVHHLPGVGQNLQDH-LEVYFQYHCQKPITLNGKLDWFSKGLIGAEWILTRKGLGATN 338
Query: 348 NFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
+F + G+ P I Q +P R + A D F+ K
Sbjct: 339 HFESCAFIRSRAGLKWPNI-QYHFLPAAMR--------YDGQAAFDGHGFQVHVGPNK-- 387
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
P S G +E+ + NP+D P + FNY D Q I +I+ + +F+ E +
Sbjct: 388 -PESRGRVEIVSANPSDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFRGEEIQ 446
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDY 521
I V A ++Q+ ++ V + +H C++G V+D +
Sbjct: 447 PGINVATDA---------------EIDQWVKENVESAYHPSCSCKMGADDDPMAVLDEEC 491
Query: 522 KVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 564
+V G+ LRV+D S F P N A +M+ IL ++
Sbjct: 492 RVRGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLILHKQ 534
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 142/581 (24%), Positives = 232/581 (39%), Gaps = 104/581 (17%)
Query: 48 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-------- 97
D++IIG G+AG +A LS++ SV+++E YG P++ L AALS
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIE-----YGVPDVGPLIQMPAALSFPMNMETY 58
Query: 98 DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREV---------GWDE 148
D ++ + I ++ R +VLGG S +N Y R + R+ GW
Sbjct: 59 DWGFSTEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRG---HARDYDHWSESGARGWAY 115
Query: 149 RLVNESYQWVEKVVAFEPPMR------QWQSAVRD-----GLVEVGVLPYNGFTYDHMYG 197
V ++ +E + R Q RD VE G T D+
Sbjct: 116 ADVLPYFKRMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNGE 175
Query: 198 TKIGGTIFDQ---NGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVF 254
+ G +Q NG+R +AA+ Y P+ L +V V KG AR + +
Sbjct: 176 KQEGFGPMEQTIHNGRRWSAANA--YLKPA----LKRPNVKLV----KGLARKIV--LEG 223
Query: 255 RDATGAK---HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPL 303
+ A G + R++ + E+I++A ++ SP+LLMLSG H I VV D+P
Sbjct: 224 KRAVGVEIEAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPG 283
Query: 304 VGQGMSDNPMNAIFVPSPVPVEV-SLIQVVGITQFGS---YIEAASG--ENFAGGSPSPR 357
VGQ + D+ I P+ + S + + + G+ + + G +F +
Sbjct: 284 VGQNLQDHLEVYIQQECTQPITLYSKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRS 343
Query: 358 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 417
G+ P I Q +P R A +A P M S G + L
Sbjct: 344 KAGVEYPDI-QYHFLPVAIRYDGKAAAQSHGFQAHVGP-----------MRSKSRGSVTL 391
Query: 418 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 477
R+ NP + P + FNY +D + +I +F+ ++ +
Sbjct: 392 RSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYRGAEIQPGA------- 444
Query: 478 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRV 531
H + ++ F ++ V + +H G C++G VVD + +V+GV+ LRV
Sbjct: 445 --------HVQSDDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGLRV 496
Query: 532 IDGSTFYYSPGTNPQATVMMLGRYMGVRILSER-LASNDSK 571
D S F N +M+G IL LA +D +
Sbjct: 497 ADSSIFPRITNGNLNGPSIMVGEKASDHILGRTPLARSDQE 537
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 147/583 (25%), Positives = 227/583 (38%), Gaps = 116/583 (19%)
Query: 46 YYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-DLSST 102
+YDYII+G G+AGC LA LS++ SVLLLE GGS + + ALS ++S
Sbjct: 4 HYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGS-----DKSIFIQMPTALSYPMNSE 58
Query: 103 SPSQRFISE-----DG--VINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWDER 149
+ +F ++ DG + R +VLGG S +N Y R E GW+ +
Sbjct: 59 KYAWQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQ 118
Query: 150 LVNESYQWVEKVVAFEPPMRQWQS-----------------AVRDGLVEVG---VLPYNG 189
++ E + E R A D E G YNG
Sbjct: 119 ACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNG 178
Query: 190 FTYD-----HMYGTKIGGTIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFRIK 242
+ + HM T+ +NG R + ++ L S L+ V ++L K
Sbjct: 179 YQQEGFGPMHM-------TV--KNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK 229
Query: 243 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHN 294
A GV F + G + KNE+I SAG++GS QLL LSG
Sbjct: 230 -----RAVGVEF-ELAGELRTCF----AKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAG 279
Query: 295 ITVVLDQPLVGQGMSDNPMNAIF---VPSPVPVEVSLIQ----VVGITQFGSYIEAASGE 347
+T V P VGQ + D+ + F P+ + L ++G + +
Sbjct: 280 VTPVYHLPGVGQNLQDH-LEVYFQYHCQKPITLNGKLDWFSKGLIGTEWILTRKGLGATN 338
Query: 348 NFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
+F + G+ P I Q +P R + A D F+ K
Sbjct: 339 HFESCAFIRSRAGLKWPNI-QYHFLPAAMR--------YDGQAAFDGHGFQVHVGPNK-- 387
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
P S G +E+ + NP D P + FNY D Q I +I+ + +F+ E +
Sbjct: 388 -PESRGRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFRGEEIQ 446
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDY 521
I V A ++Q+ ++ V + +H C++G V+D +
Sbjct: 447 PGINVATDA---------------EIDQWVKENVESAYHPSCSCKMGADDDPMAVLDEEC 491
Query: 522 KVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 564
+V G+ LRV+D S F P N A +M+ IL ++
Sbjct: 492 RVRGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLILHKQ 534
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 143/574 (24%), Positives = 234/574 (40%), Gaps = 107/574 (18%)
Query: 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 98
YDYIIIG G+AG LAA L++ + SVLLLE GG Y T + + G +
Sbjct: 3 YDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 62
Query: 99 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTR----------------------A 136
T P + +++ + R + LGG S +N Y R
Sbjct: 63 AYETDP-EPHMNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWSYLDC 121
Query: 137 APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTY 192
PY+ R+VG ++ Y V+ P + + + +VE GV T
Sbjct: 122 LPYFRKAETRDVGAND------YHGASGPVSVTTP-KMGNNELFHAMVEAGVQAGYPRT- 173
Query: 193 DHMYGTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKA 245
D + G + G T+ + + TA L+ A LT++ HA ++LF K +A
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFDGK-RA 232
Query: 246 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITV 297
VA+ F+ + +A + E+++ AGA+ SPQ+L SG +I+V
Sbjct: 233 VGVAY---FKGESAQTAKA------RREVLLCAGAIASPQILQRSGVGPKDLLQRLDISV 283
Query: 298 VLDQPLVGQGMSDNPMNAIFVPSPVPVEV-SLIQVVGITQFGSYIE------AASGENFA 350
V D P VG+ + D+ + PV + +Q + G+ AS + A
Sbjct: 284 VHDLPGVGENLQDHLEMYLQYACKEPVSLYPALQWFNQPKIGAEWLFNGTGIGASNQFEA 343
Query: 351 GGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV 410
GG RD + P I Q +P +A A+ + F+ M +
Sbjct: 344 GGFIRSRDEFTW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQAHV---GSMRSL 390
Query: 411 STGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPI 470
S G +++R+++ ++PS+ FNY +D Q I +I+ + K++ +S +
Sbjct: 391 SRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKYRGREISPGL 450
Query: 471 LVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGV 526
V L++F R T +H C++G+ VVD V G+
Sbjct: 451 AV---------------QTDEELDEFIRTHAETAFHPSCSCKMGEDDMSVVDGQGCVHGM 495
Query: 527 DALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
+ LRV+D S N AT +M+ + RI
Sbjct: 496 EGLRVVDASIMPQIITGNLNATTIMIAEKIADRI 529
>sp|Q3BXK8|BETA_XANC5 Choline dehydrogenase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=betA PE=3 SV=1
Length = 556
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 141/566 (24%), Positives = 225/566 (39%), Gaps = 89/566 (15%)
Query: 47 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 149
+ + + + ++ + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYR 121
Query: 150 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 196
V Y + V+ P + + +VE GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGDGPVSVATPKND-NNVLFHAMVEAGVQAGYPRT-DDLN 179
Query: 197 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 249
G + G T+ + + TA L+ A P GL ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRAIGV 237
Query: 250 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 301
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 302 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 358
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYIQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 359 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 418
G F + + P Q +A A+ + F+ M S G + +
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAK 402
Query: 419 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 478
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 479 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 534
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRSRAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRI 560
S N AT +M+ + R+
Sbjct: 508 SIMPRIITGNLNATTIMIAEKIADRM 533
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 145/577 (25%), Positives = 230/577 (39%), Gaps = 111/577 (19%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS------- 97
+DYIIIG G+AG LA L+++A SVLLLE GG Y + AAL+
Sbjct: 5 FDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA------------------- 137
+ + + + ++ + R + LGG S +N Y R
Sbjct: 62 YNWAYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLEDWTYH 121
Query: 138 ---PYYVREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDH 194
PY+ + D + Y + V+ P + + + +VE GV T D
Sbjct: 122 DCLPYFRKAESRD--IGPNDYHGGDGPVSVTTP-KAGNNPLFHAMVEAGVQAGYPRT-DD 177
Query: 195 MYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARP 247
+ G + G T+ Q + TA L+ A LT++ HA+ ++LF GK
Sbjct: 178 LNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHATTDRILF--DGKR-- 233
Query: 248 VAHGVVF-----RDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------N 294
A GV + DAT A+ R E+++ AGA+ SPQ+L SG +
Sbjct: 234 -ASGVSYLIGNANDATEARAR--------REVLLCAGAIASPQILQRSGVGPAALLRELD 284
Query: 295 ITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEV----SLIQVVGITQ---FGSYIEAASGE 347
I +V + P VGQ + D+ + PV + L+ GI F AS +
Sbjct: 285 IALVHELPGVGQNLQDHLEMYLQYACTQPVSLYPALKLLNQPGIGAQWLFTGNGIGASNQ 344
Query: 348 NFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
AGG R + P I Q +P +A A+++ F+ M
Sbjct: 345 FEAGGFIRTRPEFAW-PNI-QFHFLP--------VAINYNGSNAVNEHGFQAHV---GSM 391
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
S G ++L++++P +PS+ FNY +D Q I +I+ + ++ +S
Sbjct: 392 RSPSRGRIQLKSKDPRQHPSILFNYMSHEQDWQEFRDAIRITREIMAQPALDSYRGREIS 451
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 523
I + L+ F R+ T +H C++G+ VVD +V
Sbjct: 452 PGI---------------DCQSDAELDAFIREHAETAFHPSCSCKMGEDDMAVVDGQGRV 496
Query: 524 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
GV LRV+D S N AT +M+ + RI
Sbjct: 497 HGVQGLRVVDASIMPEIITGNLNATTIMMAEKIADRI 533
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 139/596 (23%), Positives = 242/596 (40%), Gaps = 103/596 (17%)
Query: 41 AQPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITN--LGSFGAAL 96
++P YD+I+IGGG+AG +A+ LS+ VLL+E GG I + L G+ +
Sbjct: 59 SEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDI 118
Query: 97 SDLSSTSPSQRFI---SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWD 147
+T P E R +VLGG S LN Y R + GW
Sbjct: 119 DYRYNTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWA 178
Query: 148 ERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN-GFTYDHMY-GTKIGGTIF 205
V ++ E + + ++ + + GL+ VG PYN +Y + G ++G ++
Sbjct: 179 YNDVLPFFKKSEDNLDLDEVGTEYHA--KGGLLPVGKFPYNPPLSYAILKAGEELGFSVH 236
Query: 206 DQNGQ--------RHTAADLLEYANP----------SGLTLLLHASVHKVLFRIKGKARP 247
D NGQ + TA + + Y++ + L +LL+ + K+L K
Sbjct: 237 DLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKN-- 294
Query: 248 VAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITVVL 299
GV D G+ + + K E+++SAGA+ SP +L+LSG N+ V
Sbjct: 295 -VLGVEVSDQFGSTRKILV----KKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVH 349
Query: 300 DQPLVGQGMSDN---------------PMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAA 344
+ P VG+ + ++ P+N + L+ GI+ + A
Sbjct: 350 NLPGVGKNLHNHVTYFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISD----VTAK 405
Query: 345 SGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILE 404
+A SP D ++ G L+ + E ++ +++ I
Sbjct: 406 LATRYA-DSPERPDLQLYFG--GYLASCARTGQVGELLSNNSRSIQ-----------IFP 451
Query: 405 KVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYE 464
V+ P S G + LR+ +P + P + NY +D++ V+GI + ++ ++ ++
Sbjct: 452 AVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQY--- 508
Query: 465 SMSVPILVNMTASAPVNLLPRHSNASTS-LEQFCRDTVMTIWHYHGGCQVG------KVV 517
M + V A H+ S + E R H G C++G VV
Sbjct: 509 GMRLDKTVVKGCEA-------HAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVV 561
Query: 518 DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML---GRYMGVRILSERLASNDS 570
+H+ +V G+ LRV+D S N A +M+ G Y+ R ++ D+
Sbjct: 562 NHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAWGAKVURVDA 617
>sp|B0V945|BETA_ACIBY Choline dehydrogenase OS=Acinetobacter baumannii (strain AYE)
GN=betA PE=3 SV=1
Length = 552
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 141/577 (24%), Positives = 234/577 (40%), Gaps = 104/577 (18%)
Query: 44 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 97
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 98 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA----------------- 136
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 137 -----APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 187
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 188 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 240
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 241 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 292
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 293 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 350
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 351 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 523
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 524 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
G++ LRV+D S N AT +M+ + +I
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKIADQI 535
>sp|B0VST3|BETA_ACIBS Choline dehydrogenase OS=Acinetobacter baumannii (strain SDF)
GN=betA PE=3 SV=1
Length = 552
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 141/577 (24%), Positives = 234/577 (40%), Gaps = 104/577 (18%)
Query: 44 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 97
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 98 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA----------------- 136
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 137 -----APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 187
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 188 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 240
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 241 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 292
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 293 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 350
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 351 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 523
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 524 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
G++ LRV+D S N AT +M+ + +I
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKIADQI 535
>sp|B2HV79|BETA_ACIBC Choline dehydrogenase OS=Acinetobacter baumannii (strain ACICU)
GN=betA PE=3 SV=1
Length = 552
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 141/577 (24%), Positives = 234/577 (40%), Gaps = 104/577 (18%)
Query: 44 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 97
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 98 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA----------------- 136
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 137 -----APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 187
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 188 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 240
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 241 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 292
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 293 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 350
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 351 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 523
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 524 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
G++ LRV+D S N AT +M+ + +I
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKIADQI 535
>sp|B7I895|BETA_ACIB5 Choline dehydrogenase OS=Acinetobacter baumannii (strain AB0057)
GN=betA PE=3 SV=1
Length = 552
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 141/577 (24%), Positives = 234/577 (40%), Gaps = 104/577 (18%)
Query: 44 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 97
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 98 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA----------------- 136
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 137 -----APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 187
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 188 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 240
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 241 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 292
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 293 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 350
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 351 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 523
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 524 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
G++ LRV+D S N AT +M+ + +I
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKIADQI 535
>sp|B7GYG5|BETA_ACIB3 Choline dehydrogenase OS=Acinetobacter baumannii (strain
AB307-0294) GN=betA PE=3 SV=1
Length = 552
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 141/577 (24%), Positives = 234/577 (40%), Gaps = 104/577 (18%)
Query: 44 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 97
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 98 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA----------------- 136
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 137 -----APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 187
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 188 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 240
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 241 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 292
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 293 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 350
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 351 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 407
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 408 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 467
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 468 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 523
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 524 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
G++ LRV+D S N AT +M+ + +I
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKIADQI 535
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 227/558 (40%), Gaps = 87/558 (15%)
Query: 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERG------GSPYGNPNITNLGSFGAALSD 98
Y ++++G G+AGC LA+ L++ N VLLLE G GS I + + L D
Sbjct: 43 YTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLCD 102
Query: 99 -----LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVREVGWDERLVN 152
T P Q + + R RV GG S LNA Y R A Y R W R
Sbjct: 103 DKYNWYYHTEP-QPGMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNR---W-HREGA 157
Query: 153 ESYQWVEKVVAFEPPMRQWQSAVR----DGLVEVGVLPYNGFTYD-HMYGTKIGGTIF-- 205
E + + + F R A DG + V N + + + G F
Sbjct: 158 EGWDYAHCLPYFRKAQRHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTE 217
Query: 206 DQNGQRHTAADLLEYANPSGLTL-LLHASVHKVLFR--IKGKARPVAHGVVFRDATGAKH 262
D NG + ++ G A +H VL R ++ + + + V+F + T A
Sbjct: 218 DMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLF-EGTRAVG 276
Query: 263 RAYLKNGPKN------EIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLVGQGM 308
Y+K+G ++ E+I+S GA+ SPQLLMLSG N I VV P VGQ +
Sbjct: 277 VEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNL 336
Query: 309 SDNPMNAIFVPSPVPVEVSLIQ------VVGITQFGSYI-EAASGENFAGGSPSPRDYGM 361
D+ + P+ + Q +G+ SY + A+ GG R G+
Sbjct: 337 QDHLEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGGFIRSRP-GV 395
Query: 362 FSPKIGQLSKVPPKQRTPEAIAEAIEN-MKALDDPAFRGGFILEKVMGPVSTGHLELRTR 420
P I Q +P ++ I++ K A++ + M S G L+LR+
Sbjct: 396 PHPDI-QFHFLP---------SQVIDHGRKPTQQEAYQ---VHVGTMRATSVGWLKLRSA 442
Query: 421 NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 480
NP D+P + NY D++ Q + +I ++ + F+ + + P
Sbjct: 443 NPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGKELQ-----------PG 491
Query: 481 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDALRVIDG 534
+ H + ++ F R + +H C++G+ VVD KV+GV+ LRV+D
Sbjct: 492 S----HVQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDA 547
Query: 535 STFYYSPGTNPQATVMML 552
S N A +M+
Sbjct: 548 SIMPSVVSGNLNAPTVMI 565
>sp|B2TCJ8|BETA_BURPP Choline dehydrogenase OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=betA PE=3 SV=1
Length = 561
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 147/579 (25%), Positives = 236/579 (40%), Gaps = 117/579 (20%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYII+G G+AG LA+ L+++A +VLLLE GG Y T + AAL+
Sbjct: 6 YDYIIVGAGSAGNVLASRLTEDADVTVLLLEAGGPDYRFDFRTQMP---AALAFPLQGRR 62
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQ 156
+ + + + ++ + R + LGG S +N Y R + GW E++
Sbjct: 63 YNWAYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNA--LDYDGWAAHAGLENWT 120
Query: 157 WVEKVVAFEPPMRQWQSAVRDG---------------------------LVEVGVLPYNG 189
+++ + F ++ RD +VE GV G
Sbjct: 121 YLDCLPYFR------KAETRDAGANAYHGGDGPVHVTTSKPGNNPLFAAMVEAGVQA--G 172
Query: 190 F-TYDHMYGTKIGG-----TIFDQNGQR-HTAADLLEYANPS-GLTLLLHASVHKVLFRI 241
F D + G + G NG+R TA L+ A LT++ HA +VLF
Sbjct: 173 FPRTDDLNGYQQEGFGPMDRTVTANGRRASTARGYLDRAKTRPNLTIVTHAVTDRVLFSG 232
Query: 242 KGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH-------- 293
K A GV + H + + E++V +GA+ SPQLL SG
Sbjct: 233 K-----RAVGVAY-----LHHGNAVNAQARREVLVCSGAIASPQLLQRSGVGRSTWLREL 282
Query: 294 NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEV-SLIQ-----VVGITQF--GSYIEAAS 345
++ +V D P VG+ + D+ I P+ + +Q +G+ G+ I AS
Sbjct: 283 DVPLVHDLPGVGENLQDHLEMYIQYECKEPISLYPALQWWNQPAIGLEWMLKGTGI-GAS 341
Query: 346 GENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEK 405
+ AGG RD ++ P I Q +P +A A+ F+
Sbjct: 342 NQFEAGGFIRTRDDDLW-PNI-QYHFLP--------VAINYNGSNAIKMHGFQAHV---G 388
Query: 406 VMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYES 465
M S G ++L +R+PN +PS+ FNY +P D + GI +I+ + +++
Sbjct: 389 SMRSPSRGRVKLTSRDPNAHPSILFNYMADPLDWREFRDGIRITREIMRQPALDRYRGRE 448
Query: 466 MSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDY 521
++ P L L+ F R T +H C++G VVD++
Sbjct: 449 LN-----------PGAEL----TTDEQLDTFVRMRAETAFHPSCSCKMGYDDMAVVDNEG 493
Query: 522 KVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
+V G++ALRV+D S N A +ML + RI
Sbjct: 494 RVHGMEALRVVDASIMPRITTGNLNAPTIMLAEKIADRI 532
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 140/567 (24%), Positives = 222/567 (39%), Gaps = 97/567 (17%)
Query: 48 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-------- 97
D++IIG G+AG +A LS+N SV+++E YG P++ L AALS
Sbjct: 4 DFVIIGSGSAGSAMAYRLSENGRYSVIVIE-----YGVPDVGPLIQMPAALSFPMNMETY 58
Query: 98 DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVRE--VGWDERLV 151
D +S + I ++ R +VLGG S +N Y R ++ + GW V
Sbjct: 59 DWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 152 NESYQWVEKVVAFEPPMRQW------QSAVRD-----GLVEVGVLPYNGFTYDHMYGTKI 200
++ +E + R Q RD VE G T D+ +
Sbjct: 119 LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQE 178
Query: 201 GGTIFDQ---NGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 257
G +Q NG+R +AA+ Y P+ L +V V KG AR + + + A
Sbjct: 179 GFGPMEQTIHNGRRWSAANA--YLKPA----LKRPNVKLV----KGFARKIV--LEGKRA 226
Query: 258 TGAK---HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQ 306
G + R + + E+I++A ++ SP+LLMLSG H I +V D+P VGQ
Sbjct: 227 VGVEIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 307 GMSDNPMNAIFVPSPVPV----EVSLIQV--VGITQFGSYIEAASGENFAGGSPSPRDYG 360
+ D+ I P+ E++L +G+ + +F + G
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAG 346
Query: 361 MFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTR 420
+ P I Q +P R A +A P M S G + LR+
Sbjct: 347 VEYPDI-QYHFLPVAIRYDGKAAAQSHGFQAHVGP-----------MRSKSRGSVTLRSA 394
Query: 421 NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 480
NP + P + FNY +D + +I +F ++ +
Sbjct: 395 NPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGA---------- 444
Query: 481 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDG 534
H ++ F R+ V + +H G C++G VVD + +V+GV+ LRV D
Sbjct: 445 -----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRIL 561
S F N +M+G IL
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASDHIL 526
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 222/567 (39%), Gaps = 91/567 (16%)
Query: 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 98
+DYIIIG G+AG LA L++ N SVLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 99 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESY--- 155
T P + F++ + R + LGG S +N Y R + + L N SY
Sbjct: 63 AYETEP-EPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSYLDC 121
Query: 156 -QWVEKVVAFEPPMRQWQSA---------------VRDGLVEVGVLPYNGFTYDHMYGTK 199
+ K + + + + ++E GV T D + G +
Sbjct: 122 LPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRT-DDLNGYQ 180
Query: 200 IGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARPVAHGV 252
G T+ Q + TA L+ A LT+ HA ++F K R V
Sbjct: 181 QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDCK---RAVGVEW 237
Query: 253 VFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLV 304
+ D+T K E+++ AGA+ SPQ+L SG N I +V D P V
Sbjct: 238 LEGDSTIPTRATANK-----EVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGV 292
Query: 305 GQGMSDNPMNAIFVPSPVPVEV-------SLIQVVGITQFGSYIEAASGENFAGGSPSPR 357
G+ + D+ + PV + + ++ FG AS AGG R
Sbjct: 293 GENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSR 352
Query: 358 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 417
+ + P I Q +P +A A+ + F+ M S GH+ +
Sbjct: 353 EEFAW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQCHV---GSMRSPSRGHVRI 399
Query: 418 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 477
++R+P+ +P++ FNY +D Q I +I+ + +++ +S
Sbjct: 400 KSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGT------- 452
Query: 478 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVID 533
L++F R+ T +H G C++G VVD + +V G++ LRV+D
Sbjct: 453 --------ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVD 504
Query: 534 GSTFYYSPGTNPQATVMMLGRYMGVRI 560
S N AT +M+G M I
Sbjct: 505 ASIMPQIITGNLNATTIMIGEKMADMI 531
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 222/567 (39%), Gaps = 91/567 (16%)
Query: 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 98
+DYIIIG G+AG LA L++ N SVLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 99 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESY--- 155
T P + F++ + R + LGG S +N Y R + + L N SY
Sbjct: 63 AYETEP-EPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSYLDC 121
Query: 156 -QWVEKVVAFEPPMRQWQSA---------------VRDGLVEVGVLPYNGFTYDHMYGTK 199
+ K + + + + ++E GV T D + G +
Sbjct: 122 LPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRT-DDLNGYQ 180
Query: 200 IGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARPVAHGV 252
G T+ Q + TA L+ A LT+ HA ++F K R V
Sbjct: 181 QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDCK---RAVGVEW 237
Query: 253 VFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLV 304
+ D+T K E+++ AGA+ SPQ+L SG N I +V D P V
Sbjct: 238 LEGDSTIPTRATANK-----EVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGV 292
Query: 305 GQGMSDNPMNAIFVPSPVPVEV-------SLIQVVGITQFGSYIEAASGENFAGGSPSPR 357
G+ + D+ + PV + + ++ FG AS AGG R
Sbjct: 293 GENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSR 352
Query: 358 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 417
+ + P I Q +P +A A+ + F+ M S GH+ +
Sbjct: 353 EEFAW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQCHV---GSMRSPSRGHVRI 399
Query: 418 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 477
++R+P+ +P++ FNY +D Q I +I+ + +++ +S
Sbjct: 400 KSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGT------- 452
Query: 478 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVID 533
L++F R+ T +H G C++G VVD + +V G++ LRV+D
Sbjct: 453 --------ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVD 504
Query: 534 GSTFYYSPGTNPQATVMMLGRYMGVRI 560
S N AT +M+G M I
Sbjct: 505 ASIMPQIITGNLNATTIMIGEKMADMI 531
>sp|A8AJN0|BETA_CITK8 Choline dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 /
CDC 4225-83 / SGSC4696) GN=betA PE=3 SV=1
Length = 558
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 227/571 (39%), Gaps = 105/571 (18%)
Query: 46 YYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSF------GAALS 97
++DYIIIG G+AG LA L++++ +VLLLE GG Y T + + G +
Sbjct: 2 HFDYIIIGAGSAGNVLATRLTEDSDTTVLLLEAGGPDYRADFRTQMPAALAFPLQGKRYN 61
Query: 98 DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA--------------------- 136
T P + ++ + R + LGG S +N Y R
Sbjct: 62 WAYETEP-EPHMNYRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAQEPGLEHWSYLN 120
Query: 137 -APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFT 191
PYY R++G ++ Y + V+ P + + ++E GV T
Sbjct: 121 CLPYYRKAETRDIGPND------YHGGDGPVSVATPKHN-NNPLFHAMIEAGVQAGYPRT 173
Query: 192 YDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGK 244
D + G + G T+ Q + TA L+ A LT++ HA +LF +GK
Sbjct: 174 -DDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKGRPNLTIITHALTDHILF--EGK 230
Query: 245 ARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNIT 296
A GV + + + + E+++ AGA+ SPQ+L SG A +I
Sbjct: 231 K---ASGVEWLEGDSTIPTRAMA---RKEVLLCAGAIASPQILQRSGVGDASLLKAFDIP 284
Query: 297 VVLDQPLVGQGMSDNPMNAIFVPSPVPVEV-------SLIQVVGITQFGSYIEAASGENF 349
+V P VG+ + D+ + PV + + ++ FG AS
Sbjct: 285 LVHHLPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFE 344
Query: 350 AGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGP 409
AGG R FS Q +P +A A+ + F+ M
Sbjct: 345 AGGFI--RSSEAFSWPNIQYHFLP--------VAINYNGSNAVKEHGFQCHV---GSMRS 391
Query: 410 VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVP 469
S GH+ +++R+P ++P++ FNY +D Q I +II + K++ +S
Sbjct: 392 PSRGHVHIKSRDPREHPAILFNYMSTGQDWQEFRDAIRITREIINQPALDKYRGREISPG 451
Query: 470 ILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLG 525
I L+ F RD T +H G C++G VVD + +V G
Sbjct: 452 ITC---------------QTDEQLDAFVRDHAETAFHPCGTCKMGYDEMAVVDGEGRVHG 496
Query: 526 VDALRVIDGSTFYYSPGTNPQATVMMLGRYM 556
V+ LRV+D S N AT +M+G M
Sbjct: 497 VENLRVVDASIMPQIITGNLNATTIMIGEKM 527
>sp|Q8P5D7|BETA_XANCP Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=betA PE=3
SV=1
Length = 556
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 223/566 (39%), Gaps = 89/566 (15%)
Query: 47 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 149
+ + + + + + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 150 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 196
V Y E V+ P + + +V+ GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DDLN 179
Query: 197 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 249
G + G T+ Q + TA L+ A P L ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAVGV 237
Query: 250 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 301
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 302 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 358
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYMQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 359 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 418
G F + + P Q +A A+ + F+ M S G + R
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAR 402
Query: 419 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 478
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 479 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 534
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRI 560
S N AT +M+ + RI
Sbjct: 508 SIMPRIITGNLNATTIMIAEKIVDRI 533
>sp|B0RNU9|BETA_XANCB Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=betA PE=3 SV=1
Length = 556
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 223/566 (39%), Gaps = 89/566 (15%)
Query: 47 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 149
+ + + + + + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 150 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 196
V Y E V+ P + + +V+ GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DDLN 179
Query: 197 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 249
G + G T+ Q + TA L+ A P L ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAVGV 237
Query: 250 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 301
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 302 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 358
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYMQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 359 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 418
G F + + P Q +A A+ + F+ M S G + R
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAR 402
Query: 419 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 478
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 479 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 534
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRI 560
S N AT +M+ + RI
Sbjct: 508 SIMPRIITGNLNATTIMIAEKIVDRI 533
>sp|Q4UYN5|BETA_XANC8 Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=betA PE=3 SV=1
Length = 556
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 223/566 (39%), Gaps = 89/566 (15%)
Query: 47 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 149
+ + + + + + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 150 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 196
V Y E V+ P + + +V+ GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DDLN 179
Query: 197 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 249
G + G T+ Q + TA L+ A P L ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAVGV 237
Query: 250 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 301
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 302 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 358
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYMQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 359 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 418
G F + + P Q +A A+ + F+ M S G + R
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAR 402
Query: 419 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 478
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 479 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 534
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRI 560
S N AT +M+ + RI
Sbjct: 508 SIMPRIITGNLNATTIMIAEKIVDRI 533
>sp|A7MFA8|BETA_CROS8 Choline dehydrogenase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=betA PE=3 SV=1
Length = 559
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 136/575 (23%), Positives = 227/575 (39%), Gaps = 107/575 (18%)
Query: 47 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSF------GAALSD 98
+DYIIIG G+AG LA L++++ +VLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDSDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 62
Query: 99 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWV 158
T P + +++ + R + LGG S +N Y R + W ++ E + ++
Sbjct: 63 AYETEP-EPYMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDN--WAQQPGLERWTYL 119
Query: 159 EKVVAFEPPMRQWQSAVRD---------------------------GLVEVGVLPYNGFT 191
+ + + +S RD ++E GV T
Sbjct: 120 DCLPYYR------KSETRDIGANDYHGGDGPVSITTCKPGNNPLFAAMIEAGVQAGYPRT 173
Query: 192 YDHMYGTKIGGTIFDQ----NGQRH-TAADLLEYANPS-GLTLLLHASVHKVLFRIKGKA 245
D + G D+ G+R TA L+ A L ++ HA+ ++LF K +A
Sbjct: 174 DDLNGYQQEGFGPMDRFVTPKGRRSSTARGYLDTAKQRPNLKIITHATTDRILFENK-RA 232
Query: 246 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITV 297
VA+ A+ + + E+++ AGA+ SPQ+L SG N I V
Sbjct: 233 VGVAY---LHGASNTPQEVHARR----EVLLCAGAIASPQILQRSGVGNAELLKQFDIPV 285
Query: 298 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQV--------VGITQFGSYIEAASGENF 349
V D P VG+ + D+ +++ VSL +G + + +F
Sbjct: 286 VHDLPGVGENLQDHL--EMYLQYECKEPVSLYPALKWWNQPKIGAEWLFNGTGIGASNHF 343
Query: 350 AGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGP 409
GG P I Q +P +A A++ F+ M
Sbjct: 344 EGGGFIRSREEFAWPNI-QYHFLP--------VAINYNGSNAVEAHGFQCHV---GSMRS 391
Query: 410 VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVP 469
S GH+ +++R+P+ +P++ FNY +D Q I +II + KF+ +S
Sbjct: 392 PSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITRQIINQPALDKFRGREISPG 451
Query: 470 ILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLG 525
I L++F R+ T +H G C++G VVD + +V G
Sbjct: 452 I---------------DCQTDEQLDEFVRNHAETAYHPCGTCKMGSDEMAVVDDEGRVHG 496
Query: 526 VDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
++ LRV+D S N AT +M+G + I
Sbjct: 497 LEGLRVVDASIMPLIITGNLNATTIMIGEKIADNI 531
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 138/565 (24%), Positives = 226/565 (40%), Gaps = 87/565 (15%)
Query: 48 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS----DLSS 101
DYIIIG G+AG LA LS+++ SV++LE GG+ G P I + +S +
Sbjct: 4 DYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIG-PFIQMPAALAWPMSMNRYNWGY 62
Query: 102 TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVEKV 161
S + ++ + R +V+GG S +N Y R + + E+L + + + + +
Sbjct: 63 LSEPEPHLNNRRITAPRGKVIGGSSSINGMVYVRG---HAEDFDRWEQLGAKGWAYADVL 119
Query: 162 VAFEPPMRQ------WQSAVRDGLVEVGVLPYNGFTYDHMY---GTKIGGTIFDQ-NGQR 211
F+ W+ DG + V P + H + G + G + D NG +
Sbjct: 120 PYFKRMEHSHGGEDGWRGT--DGPLHVQRGPVKNPLF-HAFVEAGKQAGFEMTDDYNGSK 176
Query: 212 HTAADLLEYANPSGLTLLLHASVHKVLFRIKGKA--RPVAHGVVFRD--ATGAKHRAYLK 267
L+E G ++ K + R A +V + ATG + ++
Sbjct: 177 QEGFGLMEQTTWRGRRWSAASAYLKPALKRPNVQLIRCFARKIVIENGRATGVE----IE 232
Query: 268 NGPK-------NEIIVSAGALGSPQLLMLSG----AH----NITVVLDQPLVGQGMSDNP 312
G + E+IVSA + SP+LLMLSG AH I V +D+P VGQ + D+
Sbjct: 233 RGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDLGIDVKVDRPGVGQNLQDHM 292
Query: 313 MNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFS-----PKIG 367
S PV + + F + A F G + + P +
Sbjct: 293 EFYFQQISTKPVSL----YSWLPWFWQGVAGAQWLFFKSGLGISNQFEACAFLRSAPGVK 348
Query: 368 QLSKVPPKQRTPEAIAEAIENMKALDDPAFRG--GFILEKVMGPVSTGHLELRTRNPNDN 425
Q P Q +A + A + F+ G+ L K S G + LR +P +
Sbjct: 349 Q----PDIQYHFLPVAIRYDGKAAANTHGFQVHVGYNLSK-----SRGSVTLRASDPKAD 399
Query: 426 PSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPR 485
P + FNY PED ++ + +I K+F +++ P
Sbjct: 400 PVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDQYR---------------GPEIQPGE 444
Query: 486 HSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDALRVIDGSTFYY 539
++ F R+ + + +H G C++G VVD + +V+GVD LRV D S F +
Sbjct: 445 RVQTDEEIDAFLREHLESAYHPCGTCKMGSKDDPMAVVDPETRVIGVDGLRVADSSIFPH 504
Query: 540 SPGTNPQATVMMLGRYMGVRILSER 564
N A +M G IL ++
Sbjct: 505 VTYGNLNAPSIMTGEKAADHILGKQ 529
>sp|A7N2P9|BETA_VIBHB Choline dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=betA PE=3 SV=1
Length = 569
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 141/584 (24%), Positives = 229/584 (39%), Gaps = 106/584 (18%)
Query: 46 YYDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSFGAALS-DLSST 102
+YDYII+G G+AGC LA LS++ VLLLE GGS + + ALS +++
Sbjct: 4 HYDYIIVGAGSAGCVLADRLSESGQHQVLLLEAGGS-----DKSIFIQMPTALSYPMNTE 58
Query: 103 SPSQRF--ISEDGVINS-----RARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESY 155
+ +F ++E+G+ R +VLGG S +N Y R +DE +
Sbjct: 59 KYAWQFETVAEEGLDGRQLHCPRGKVLGGSSSINGMVYVRG-----HACDFDEWEAEGAK 113
Query: 156 QW-VEKVVAFEPPMRQWQSAV---RDGLVEVGVLPYNGFTYDHMYGTKIGG-------TI 204
W + + + W R G VG N + +Y I
Sbjct: 114 GWNYQACLPYFRKAETWTGGADEYRGGSGPVGTCNGNDMKLNPLYQAFIEAGKDAGYPET 173
Query: 205 FDQNGQR-------HTAAD-----------LLEYANPSGLTLLLHASVHKVLFRIKGKAR 246
D NG + H D L S TL+ + H++L ++GK
Sbjct: 174 QDYNGYQQEGFGPMHMTVDKGVRASTSNAYLSRAKKRSNFTLMKGVTAHRIL--LEGKK- 230
Query: 247 PVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVV------LD 300
A G+ F + +G + + E++ SAG++GS QLL LSG TV+ +
Sbjct: 231 --AVGIEF-EQSGEIKQCF----ANKEVVSSAGSIGSVQLLQLSGIGPKTVLDKAGIEVK 283
Query: 301 QPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFG----SYIEAASG----ENFAGG 352
L G G + ++ ++L +G+ G +I G +F
Sbjct: 284 HTLEGVGKNLQDHLEVYFQYHCKQPITLNSKLGLISKGLIGTEWILTRKGLGATNHFESC 343
Query: 353 SPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVST 412
+ G+ SP I Q +P R + A D F+ K P S
Sbjct: 344 AFIRSREGLKSPNI-QFHFLPAAMR--------YDGRAAFDGHGFQVHVGPNK---PESR 391
Query: 413 GHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILV 472
G +E+ + NPND P + FNY +D Q I +I+ + F+ E + P L
Sbjct: 392 GSVEVVSANPNDKPKIEFNYISTEQDKQDWRDCIRLTREILNQPAMDAFRGEEIQ-PGL- 449
Query: 473 NMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGV 526
N+T+ + ++ + V + +H C++G V++ +V G+
Sbjct: 450 NITSDEAIG-------------EWVKQNVESAYHPSCSCKMGSNDDPMAVLNEACQVRGI 496
Query: 527 DALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASNDS 570
+ LRV+D S F P N A +M+ IL L +++
Sbjct: 497 EGLRVVDSSIFPTIPNGNLNAPTIMVAERAADMILGNTLEQSNN 540
>sp|A4JJG6|BETA_BURVG Choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=betA PE=3 SV=1
Length = 566
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 227/582 (39%), Gaps = 123/582 (21%)
Query: 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYII G G+AG LA L++ N +VLLLE GG Y T + AAL+
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMP---AALAYPLQGRR 62
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQ 156
+ + + + + + R + LGG S +N Y R + W E +
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNA--LDYDNWSTHQGLERWT 120
Query: 157 WVEKVVAFEPPMRQWQSAVRD---------------------------GLVEVGVLPYNG 189
+++ + F ++ RD +VE GV
Sbjct: 121 YLDCLPYFR------KAETRDVGPNDYHGGDGPVSVTTSKPGANPLFEAMVEAGVQAGYP 174
Query: 190 FTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIK 242
T D + G + G T+ + + TA L+ A L ++ HA ++LF K
Sbjct: 175 RT-DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFDGK 233
Query: 243 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------N 294
+A VA+ R + A A + E++V +GA+ SPQLL SG +
Sbjct: 234 -RASGVAY---LRGSERATAHA------RREVLVCSGAIASPQLLQRSGVGPGAWLKELD 283
Query: 295 ITVVLDQPLVGQGMSDNPMNAIFVPSPVPV------------EVSLIQVVGITQFGSYIE 342
I +VLD P VGQ + D+ I PV ++ L ++ T G
Sbjct: 284 IPIVLDLPGVGQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLG---- 339
Query: 343 AASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFI 402
AS AGG RD + P I Q +P +A A++ F+
Sbjct: 340 -ASNHFEAGGFIRTRDDDPW-PNI-QYHFLP--------VAINYNGSNAIEMHGFQAHV- 387
Query: 403 LEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFK 462
M S G ++LR+R+PND+PS+ FNY E D + I +I+ + +++
Sbjct: 388 --GSMRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYR 445
Query: 463 YESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVD 518
+ N A + L+ F R T +H C++G VVD
Sbjct: 446 GREL------NPGADC---------RSDKELDTFVRARAETAFHPSCSCKMGYDDMAVVD 490
Query: 519 HDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
+ +V G+D LRV+D S N A +M+ + RI
Sbjct: 491 DEGRVHGLDGLRVVDASIMPIITTGNLNAPTIMIAEKIADRI 532
>sp|B4EHJ2|BETA_BURCJ Choline dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=betA PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 146/576 (25%), Positives = 227/576 (39%), Gaps = 111/576 (19%)
Query: 47 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 97
YDYII G G+AG LA L+++ +VLLLE GG Y T + AAL+
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMP---AALAYPLQGRR 62
Query: 98 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESY- 155
+ + + + + + R + LGG S +N Y R + L N +Y
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYL 122
Query: 156 ---QWVEK-------------------VVAFEPPMRQWQSAVRDGLVEVG---VLPYNGF 190
+ +K V +P + A+ D V+ G NG+
Sbjct: 123 DCLPYFKKAETRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGY 182
Query: 191 TYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARPVA 249
+ + T+ + + TA L+ A L ++ HA ++LF GK A
Sbjct: 183 QQEGF--GPMDRTVTPKGRRASTARGYLDQAKARPNLEIVTHALADRILF--DGKR---A 235
Query: 250 HGVVF-RDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLD 300
GV + R + A A + E++V +GA+ SPQLL SG A +I VVLD
Sbjct: 236 SGVTYLRGSERATAHA------RREVLVCSGAIASPQLLQRSGVGPGAWLKALDIPVVLD 289
Query: 301 QPLVGQGMSDNPMNAIFVPSPVPV------------EVSLIQVVGITQFGSYIEAASGEN 348
P VGQ + D+ I PV ++ L ++ T G AS
Sbjct: 290 LPGVGQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLG-----ASNHF 344
Query: 349 FAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMG 408
AGG RD + P I Q +P +A A++ F+ M
Sbjct: 345 EAGGFIRTRDDDPW-PNI-QYHFLP--------VAINYNGSNAIEMHGFQAHV---GSMR 391
Query: 409 PVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSV 468
S G ++LR+R+PND+PS+ FNY E D + I +I+ + +++ +
Sbjct: 392 SPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGREL-- 449
Query: 469 PILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVL 524
N A + L+ F R T +H C++G VVD + +V
Sbjct: 450 ----NPGADCKTD---------KELDAFVRARAETAFHPSCSCKMGYDDMAVVDEEGRVH 496
Query: 525 GVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI 560
G+D LRV+D S N A +M+ + +I
Sbjct: 497 GLDGLRVVDASIMPIITTGNLNAPTIMIAEKIADKI 532
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 220/564 (39%), Gaps = 99/564 (17%)
Query: 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERG------GSPYGNPNITNLGSFGAALSD 98
Y +I++G G+AGC LA L++ N VLLLE G GS I + A L D
Sbjct: 46 YTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCD 105
Query: 99 LSST----SPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVREVGWDERLVNE 153
+ +Q + + R RV GG S LNA Y R A Y R W R E
Sbjct: 106 DKYNWYYHTEAQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNR---W-HRQGAE 161
Query: 154 SYQWVEKVVAFEPPMRQWQSAVR----DGLVEVGVLPYNG----------------FTYD 193
+ + + F + A DG + V N FT D
Sbjct: 162 GWDYAHCLPYFRKAQKHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTED 221
Query: 194 HMYGTKIGGTIFD---QNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAH 250
+ G D G+R + A Y P+ L A V ++ R+ +
Sbjct: 222 MNGFQQEGFGWMDMTIHQGKRWSTAS--AYLRPALSRPNLRAEVQTLVSRVLFEGTRAVG 279
Query: 251 GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITVVLDQP 302
+D G H+AY+ E+I+S GA+ SPQLLMLSG N I VV P
Sbjct: 280 VEYIKD--GQSHKAYVSR----EVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLP 333
Query: 303 LVGQGMSDNPMNAIFVPSPVPVEVSLIQ------VVGITQFGSYI-EAASGENFAGGSPS 355
VGQ + D+ I P+ + Q +G+ + + A+ GG
Sbjct: 334 GVGQNLQDHLEIYIQHACTQPITLHSAQKPLRKVCIGLEWLWRFTGDGATAHLETGGFIR 393
Query: 356 PRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIEN-MKALDDPAFRGGFILEKVMGPVSTGH 414
R G+ P I Q +P ++ I++ K A++ + M S G
Sbjct: 394 SRP-GVPHPDI-QFHFLP---------SQVIDHGRKPTQQEAYQ---VHVGTMRATSVGW 439
Query: 415 LELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNM 474
L+LR+ NP D+P + NY D++ Q + +I ++F+ F+ + +
Sbjct: 440 LKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQEAFAPFRGKELQ------- 492
Query: 475 TASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDA 528
P + H + ++ F R + +H C++G+ VVD +V+GV+
Sbjct: 493 ----PGS----HVQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVEN 544
Query: 529 LRVIDGSTFYYSPGTNPQATVMML 552
LRVID S N A +M+
Sbjct: 545 LRVIDASIMPSVVSGNLNAPTIMI 568
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 225/567 (39%), Gaps = 97/567 (17%)
Query: 48 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-------- 97
D++IIG G+AG +A LS++ SV+++E YG P++ L AALS
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIE-----YGVPDVGPLIQMPAALSFPMNMETY 58
Query: 98 DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVRE--VGWDERLV 151
D +S + I ++ R +VLGG S +N Y R ++ + GW V
Sbjct: 59 DWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 152 NESYQWVEKVVAFEPPMRQW------QSAVRD-----GLVEVGVLPYNGFTYDHMYGTKI 200
++ +E + R Q RD VE G T D+ +
Sbjct: 119 LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQE 178
Query: 201 GGTIFDQ---NGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 257
G +Q NG+R +AA+ Y P+ L +V V KG AR + + + A
Sbjct: 179 GFGPMEQTIHNGRRWSAANA--YLKPA----LKRPNVKLV----KGFARKIV--LEGKRA 226
Query: 258 TGAK---HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQ 306
G + R + + E+I++A ++ SP+LLMLSG H I +V D+P VGQ
Sbjct: 227 VGVEIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 307 GMSDNPMNAIFVPSPVPVEV-SLIQVVGITQFG-SYIEAASGE----NFAGGSPSPRDYG 360
+ D+ I P+ + S + + + G ++ +G+ +F + G
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAG 346
Query: 361 MFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTR 420
+ P I Q +P R A +A P M S G + LR+
Sbjct: 347 VEYPDI-QYHFLPVAIRYDGKAAAQSHGFQAHVGP-----------MRSKSRGSVTLRSA 394
Query: 421 NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 480
NP + P + FNY +D + +I +F ++ +
Sbjct: 395 NPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGA---------- 444
Query: 481 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDG 534
H ++ F R+ V + +H G C++G VVD + +V+GV+ LRV D
Sbjct: 445 -----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 535 STFYYSPGTNPQATVMMLGRYMGVRIL 561
S F N +M+G IL
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASDHIL 526
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,217,607
Number of Sequences: 539616
Number of extensions: 10190148
Number of successful extensions: 25005
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 24205
Number of HSP's gapped (non-prelim): 523
length of query: 571
length of database: 191,569,459
effective HSP length: 123
effective length of query: 448
effective length of database: 125,196,691
effective search space: 56088117568
effective search space used: 56088117568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)