Query 008281
Match_columns 571
No_of_seqs 205 out of 1887
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 22:29:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008281.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008281hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 3.9E-79 1.3E-83 657.0 32.8 492 46-563 2-565 (566)
2 1ju2_A HydroxynitrIle lyase; f 100.0 3.1E-78 1.1E-82 651.1 32.6 498 31-568 11-521 (536)
3 3qvp_A Glucose oxidase; oxidor 100.0 4E-77 1.4E-81 642.0 36.9 479 44-563 17-578 (583)
4 3q9t_A Choline dehydrogenase a 100.0 1.6E-74 5.6E-79 622.4 32.4 483 44-563 4-572 (577)
5 1gpe_A Protein (glucose oxidas 100.0 1.4E-72 4.8E-77 612.5 30.4 494 44-565 22-584 (587)
6 3t37_A Probable dehydrogenase; 100.0 3.1E-72 1.1E-76 607.5 31.9 463 44-562 15-522 (526)
7 2jbv_A Choline oxidase; alcoho 100.0 1.9E-69 6.5E-74 584.0 33.2 469 44-564 11-530 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 8.1E-61 2.8E-65 519.1 24.4 468 44-563 5-542 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 8.8E-60 3E-64 504.8 26.5 440 45-565 4-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 3.7E-59 1.3E-63 500.0 26.0 441 42-566 7-507 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 3.6E-46 1.2E-50 407.1 32.5 459 43-569 43-618 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.5 1.2E-13 4.2E-18 147.7 14.7 63 217-289 208-272 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.4 3.5E-12 1.2E-16 138.1 15.0 62 217-287 256-317 (566)
14 1y0p_A Fumarate reductase flav 99.4 6E-12 2.1E-16 136.5 15.6 60 217-285 261-320 (571)
15 2bs2_A Quinol-fumarate reducta 99.2 5.2E-11 1.8E-15 130.2 14.6 57 217-283 164-221 (660)
16 1d4d_A Flavocytochrome C fumar 99.2 9.2E-11 3.1E-15 127.0 15.6 63 217-288 261-324 (572)
17 3dme_A Conserved exported prot 99.2 2.8E-11 9.7E-16 123.5 9.6 61 217-290 156-216 (369)
18 2h88_A Succinate dehydrogenase 99.2 1.6E-10 5.3E-15 125.5 15.7 57 217-283 161-218 (621)
19 2wdq_A Succinate dehydrogenase 99.1 2.9E-10 1E-14 123.1 14.8 58 217-283 149-207 (588)
20 1chu_A Protein (L-aspartate ox 99.1 1.8E-10 6.1E-15 123.6 12.8 37 44-80 6-42 (540)
21 3da1_A Glycerol-3-phosphate de 99.1 1.9E-10 6.6E-15 124.0 13.0 64 217-291 176-240 (561)
22 3v76_A Flavoprotein; structura 99.1 8.4E-11 2.9E-15 121.9 8.5 39 42-80 23-62 (417)
23 1kf6_A Fumarate reductase flav 99.1 9.8E-10 3.4E-14 119.3 15.7 58 217-284 140-199 (602)
24 1y56_B Sarcosine oxidase; dehy 99.1 3.1E-10 1.1E-14 116.5 11.0 36 43-78 2-38 (382)
25 2rgh_A Alpha-glycerophosphate 99.1 1.5E-09 5E-14 117.4 16.1 64 217-291 194-258 (571)
26 2i0z_A NAD(FAD)-utilizing dehy 99.1 5.5E-10 1.9E-14 117.3 12.4 55 217-285 140-194 (447)
27 3nyc_A D-arginine dehydrogenas 99.1 1.6E-10 5.5E-15 118.5 8.0 36 44-79 7-42 (381)
28 3dje_A Fructosyl amine: oxygen 99.0 1.1E-09 3.9E-14 114.6 13.1 38 43-80 3-42 (438)
29 2qcu_A Aerobic glycerol-3-phos 99.0 7.2E-09 2.5E-13 110.3 15.8 60 217-288 155-215 (501)
30 2gqf_A Hypothetical protein HI 99.0 7.8E-10 2.7E-14 114.2 8.0 36 44-79 2-38 (401)
31 3gyx_A Adenylylsulfate reducta 99.0 1.3E-09 4.5E-14 119.0 9.9 57 219-282 174-233 (662)
32 1jnr_A Adenylylsulfate reducta 99.0 2.9E-09 1E-13 116.6 12.6 58 219-283 159-219 (643)
33 2gag_B Heterotetrameric sarcos 98.9 5E-09 1.7E-13 108.3 13.6 35 44-78 19-56 (405)
34 3ps9_A TRNA 5-methylaminomethy 98.9 5.2E-09 1.8E-13 115.7 14.1 35 45-79 271-306 (676)
35 2oln_A NIKD protein; flavoprot 98.9 3E-09 1E-13 109.8 11.1 36 44-79 2-38 (397)
36 1pj5_A N,N-dimethylglycine oxi 98.9 2.5E-09 8.6E-14 121.0 11.4 59 217-291 157-215 (830)
37 3pvc_A TRNA 5-methylaminomethy 98.9 2.8E-09 9.4E-14 118.1 11.1 36 44-79 262-298 (689)
38 1ryi_A Glycine oxidase; flavop 98.9 5.3E-09 1.8E-13 107.3 11.9 39 41-79 12-51 (382)
39 3axb_A Putative oxidoreductase 98.8 5.4E-09 1.9E-13 109.8 9.3 33 45-77 22-56 (448)
40 2e5v_A L-aspartate oxidase; ar 98.8 1.1E-08 3.6E-13 108.1 11.4 30 48-77 1-31 (472)
41 3oz2_A Digeranylgeranylglycero 98.8 1.3E-08 4.5E-13 104.5 11.6 36 45-80 3-39 (397)
42 2gf3_A MSOX, monomeric sarcosi 98.8 3.8E-08 1.3E-12 101.0 14.7 34 46-79 3-37 (389)
43 4dgk_A Phytoene dehydrogenase; 98.8 1.4E-08 4.8E-13 108.2 10.7 69 206-288 216-284 (501)
44 1rp0_A ARA6, thiazole biosynth 98.8 3.1E-08 1.1E-12 97.2 12.1 35 45-79 38-74 (284)
45 3ka7_A Oxidoreductase; structu 98.8 1.4E-08 4.9E-13 105.6 10.2 57 217-288 202-258 (425)
46 3cgv_A Geranylgeranyl reductas 98.8 3E-08 1E-12 102.1 12.1 35 45-79 3-38 (397)
47 2uzz_A N-methyl-L-tryptophan o 98.8 2.3E-08 7.8E-13 102.1 10.6 35 46-80 2-37 (372)
48 3e1t_A Halogenase; flavoprotei 98.7 5.1E-08 1.7E-12 104.1 12.3 54 219-282 119-172 (512)
49 3atr_A Conserved archaeal prot 98.7 6.6E-08 2.2E-12 101.6 12.5 55 218-282 107-162 (453)
50 3nlc_A Uncharacterized protein 98.7 2.7E-08 9.2E-13 106.1 8.7 36 44-79 105-141 (549)
51 3p1w_A Rabgdi protein; GDI RAB 98.7 6.5E-08 2.2E-12 101.0 10.9 41 43-83 17-58 (475)
52 3nix_A Flavoprotein/dehydrogen 98.7 7.7E-08 2.6E-12 99.9 11.5 35 45-79 4-39 (421)
53 3jsk_A Cypbp37 protein; octame 98.7 9.1E-08 3.1E-12 95.2 11.3 35 45-79 78-115 (344)
54 3i3l_A Alkylhalidase CMLS; fla 98.6 1.2E-07 4.1E-12 102.5 10.9 36 44-79 21-57 (591)
55 3nrn_A Uncharacterized protein 98.6 1.4E-07 4.7E-12 98.1 9.6 36 47-82 1-37 (421)
56 3c4n_A Uncharacterized protein 98.5 6.7E-08 2.3E-12 100.0 6.2 35 45-79 35-72 (405)
57 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 1.3E-07 4.4E-12 95.4 7.3 33 47-79 2-38 (342)
58 2gjc_A Thiazole biosynthetic e 98.5 7.7E-07 2.6E-11 88.0 12.1 35 45-79 64-101 (326)
59 2zxi_A TRNA uridine 5-carboxym 98.5 2.7E-07 9.4E-12 98.8 9.1 34 45-78 26-60 (637)
60 3ihg_A RDME; flavoenzyme, anth 98.4 9E-07 3.1E-11 95.0 12.5 37 44-80 3-40 (535)
61 4a9w_A Monooxygenase; baeyer-v 98.4 3.7E-07 1.3E-11 92.2 8.9 35 45-79 2-37 (357)
62 2gmh_A Electron transfer flavo 98.4 1.3E-06 4.4E-11 94.5 13.2 57 218-283 151-218 (584)
63 3f8d_A Thioredoxin reductase ( 98.4 6.5E-06 2.2E-10 81.7 17.1 61 220-291 199-260 (323)
64 3ces_A MNMG, tRNA uridine 5-ca 98.4 4.1E-07 1.4E-11 97.9 8.6 34 45-78 27-61 (651)
65 1yvv_A Amine oxidase, flavin-c 98.4 3.6E-07 1.2E-11 91.7 7.1 35 46-80 2-37 (336)
66 2qa1_A PGAE, polyketide oxygen 98.4 2E-06 6.9E-11 91.2 13.2 38 42-79 7-45 (500)
67 3rp8_A Flavoprotein monooxygen 98.4 2.5E-06 8.5E-11 88.1 12.7 38 42-79 19-57 (407)
68 3itj_A Thioredoxin reductase 1 98.3 5.7E-07 1.9E-11 90.1 7.4 56 222-287 220-276 (338)
69 2qa2_A CABE, polyketide oxygen 98.3 2.5E-06 8.5E-11 90.5 12.5 36 44-79 10-46 (499)
70 3cp8_A TRNA uridine 5-carboxym 98.3 8.8E-07 3E-11 95.3 8.8 36 43-78 18-54 (641)
71 2vou_A 2,6-dihydroxypyridine h 98.3 3.9E-06 1.3E-10 86.3 13.4 36 44-79 3-39 (397)
72 2x3n_A Probable FAD-dependent 98.3 1.5E-06 5.3E-11 89.4 9.6 36 44-79 4-40 (399)
73 2gv8_A Monooxygenase; FMO, FAD 98.3 2.8E-06 9.7E-11 88.9 11.2 37 44-80 4-43 (447)
74 3fmw_A Oxygenase; mithramycin, 98.3 1.4E-06 5E-11 93.8 9.1 36 45-80 48-84 (570)
75 2zbw_A Thioredoxin reductase; 98.3 1.8E-06 6.3E-11 86.4 8.8 36 44-79 3-39 (335)
76 2bry_A NEDD9 interacting prote 98.3 6.5E-07 2.2E-11 95.0 5.6 36 44-79 90-126 (497)
77 3kkj_A Amine oxidase, flavin-c 98.2 4.1E-07 1.4E-11 87.8 3.5 35 46-80 2-37 (336)
78 3lxd_A FAD-dependent pyridine 98.2 2E-06 6.9E-11 89.1 8.7 59 219-291 202-260 (415)
79 1w4x_A Phenylacetone monooxyge 98.2 3.6E-06 1.2E-10 90.3 10.2 37 44-80 14-51 (542)
80 4ap3_A Steroid monooxygenase; 98.2 3.4E-06 1.2E-10 90.4 9.8 37 44-80 19-56 (549)
81 3gwf_A Cyclohexanone monooxyge 98.2 2.4E-06 8.3E-11 91.4 8.6 36 45-80 7-44 (540)
82 4fk1_A Putative thioredoxin re 98.2 7.6E-07 2.6E-11 88.1 3.4 36 43-78 3-39 (304)
83 3uox_A Otemo; baeyer-villiger 98.1 4E-06 1.4E-10 89.8 8.7 37 44-80 7-44 (545)
84 3r9u_A Thioredoxin reductase; 98.1 1.5E-05 5.1E-10 78.8 12.3 59 220-288 192-250 (315)
85 3fg2_P Putative rubredoxin red 98.1 3.1E-05 1.1E-09 79.8 15.0 59 219-291 192-250 (404)
86 3d1c_A Flavin-containing putat 98.1 7E-06 2.4E-10 83.3 9.8 34 45-78 3-38 (369)
87 2r0c_A REBC; flavin adenine di 98.1 1.1E-05 3.9E-10 86.6 11.9 36 44-79 24-60 (549)
88 3s5w_A L-ornithine 5-monooxyge 98.1 1.9E-05 6.4E-10 82.9 12.8 36 45-80 29-70 (463)
89 4gcm_A TRXR, thioredoxin reduc 98.1 1.3E-06 4.6E-11 86.6 3.7 34 45-78 5-39 (312)
90 2xve_A Flavin-containing monoo 98.1 1.2E-05 3.9E-10 84.6 10.9 34 47-80 3-43 (464)
91 3lzw_A Ferredoxin--NADP reduct 98.1 5.7E-06 2E-10 82.5 7.9 35 45-79 6-41 (332)
92 3fbs_A Oxidoreductase; structu 98.0 2E-05 6.7E-10 77.2 11.1 33 46-78 2-35 (297)
93 4a5l_A Thioredoxin reductase; 98.0 1.6E-06 5.4E-11 86.0 2.8 36 43-78 1-37 (314)
94 2bcg_G Secretory pathway GDP d 98.0 3E-06 1E-10 88.8 4.1 41 43-83 8-49 (453)
95 3fpz_A Thiazole biosynthetic e 98.0 2.7E-06 9.2E-11 85.1 3.4 37 45-81 64-103 (326)
96 1c0p_A D-amino acid oxidase; a 97.9 4.5E-06 1.5E-10 84.7 4.2 37 43-79 3-40 (363)
97 4gde_A UDP-galactopyranose mut 97.9 3.5E-06 1.2E-10 89.7 3.1 38 45-82 9-48 (513)
98 1hyu_A AHPF, alkyl hydroperoxi 97.9 7.5E-05 2.6E-09 79.6 12.7 58 220-287 399-458 (521)
99 2cul_A Glucose-inhibited divis 97.8 1E-05 3.5E-10 76.5 3.5 34 45-78 2-36 (232)
100 3k7m_X 6-hydroxy-L-nicotine ox 97.8 8.5E-06 2.9E-10 84.7 3.0 35 47-81 2-37 (431)
101 2xdo_A TETX2 protein; tetracyc 97.7 1.7E-05 5.9E-10 81.5 4.7 38 42-79 22-60 (398)
102 3o0h_A Glutathione reductase; 97.7 1.4E-05 4.8E-10 84.4 3.6 35 44-78 24-59 (484)
103 3qfa_A Thioredoxin reductase 1 97.7 1.5E-05 5.2E-10 84.9 3.6 40 39-78 25-65 (519)
104 3hdq_A UDP-galactopyranose mut 97.7 1.7E-05 5.9E-10 80.9 3.7 40 43-82 26-66 (397)
105 3c96_A Flavin-containing monoo 97.7 1.6E-05 5.6E-10 82.0 3.5 36 44-79 2-39 (410)
106 1v0j_A UDP-galactopyranose mut 97.7 1.9E-05 6.4E-10 81.2 4.0 40 43-82 4-45 (399)
107 1i8t_A UDP-galactopyranose mut 97.6 2.3E-05 7.7E-10 79.7 3.7 37 46-82 1-38 (367)
108 4dna_A Probable glutathione re 97.6 2.5E-05 8.5E-10 82.1 4.0 34 45-78 4-38 (463)
109 1s3e_A Amine oxidase [flavin-c 97.6 2.2E-05 7.6E-10 83.8 3.5 39 44-82 2-41 (520)
110 2ivd_A PPO, PPOX, protoporphyr 97.6 2.4E-05 8.2E-10 82.5 3.7 42 41-82 11-53 (478)
111 3ef6_A Toluene 1,2-dioxygenase 97.6 0.00031 1.1E-08 72.3 12.1 58 219-291 193-250 (410)
112 3lad_A Dihydrolipoamide dehydr 97.6 2.4E-05 8.3E-10 82.4 3.7 34 45-78 2-36 (476)
113 2b9w_A Putative aminooxidase; 97.6 3.1E-05 1.1E-09 80.2 4.4 39 44-82 4-44 (424)
114 4b63_A L-ornithine N5 monooxyg 97.6 5.8E-05 2E-09 80.0 6.5 61 215-280 148-212 (501)
115 3i6d_A Protoporphyrinogen oxid 97.6 1.9E-05 6.4E-10 82.9 2.6 37 46-82 5-48 (470)
116 3cty_A Thioredoxin reductase; 97.6 2.4E-05 8.2E-10 77.7 3.1 35 43-77 13-48 (319)
117 1d5t_A Guanine nucleotide diss 97.6 3.3E-05 1.1E-09 80.3 4.3 41 43-83 3-44 (433)
118 3alj_A 2-methyl-3-hydroxypyrid 97.6 2.8E-05 9.6E-10 79.3 3.6 36 45-80 10-46 (379)
119 2yg5_A Putrescine oxidase; oxi 97.6 2.1E-05 7.3E-10 82.2 2.6 38 45-82 4-42 (453)
120 3l8k_A Dihydrolipoyl dehydroge 97.6 2.3E-05 7.8E-10 82.4 2.8 37 44-80 2-39 (466)
121 3urh_A Dihydrolipoyl dehydroge 97.6 3.1E-05 1E-09 82.0 3.7 37 44-80 23-60 (491)
122 3ab1_A Ferredoxin--NADP reduct 97.6 3.1E-05 1.1E-09 78.3 3.5 38 43-80 11-49 (360)
123 2jae_A L-amino acid oxidase; o 97.6 4E-05 1.4E-09 81.0 4.4 40 44-83 9-49 (489)
124 1k0i_A P-hydroxybenzoate hydro 97.6 3.1E-05 1.1E-09 79.4 3.4 33 46-78 2-35 (394)
125 1rsg_A FMS1 protein; FAD bindi 97.5 2.4E-05 8.1E-10 83.4 2.5 40 44-83 6-47 (516)
126 4b1b_A TRXR, thioredoxin reduc 97.5 3.3E-05 1.1E-09 82.3 3.6 34 46-79 42-76 (542)
127 2e1m_A L-glutamate oxidase; L- 97.5 4.4E-05 1.5E-09 77.3 4.1 38 44-81 42-81 (376)
128 3dk9_A Grase, GR, glutathione 97.5 2.8E-05 9.4E-10 82.1 2.7 36 43-78 17-53 (478)
129 3ic9_A Dihydrolipoamide dehydr 97.5 2.9E-05 1E-09 82.2 2.5 34 45-78 7-41 (492)
130 2q7v_A Thioredoxin reductase; 97.5 3.8E-05 1.3E-09 76.4 3.1 34 44-77 6-40 (325)
131 1sez_A Protoporphyrinogen oxid 97.5 5.2E-05 1.8E-09 80.5 4.3 39 44-82 11-50 (504)
132 2r9z_A Glutathione amide reduc 97.5 4.7E-05 1.6E-09 79.9 3.4 35 44-78 2-37 (463)
133 3dgh_A TRXR-1, thioredoxin red 97.5 5E-05 1.7E-09 80.2 3.6 34 44-77 7-41 (483)
134 1ges_A Glutathione reductase; 97.5 4.9E-05 1.7E-09 79.5 3.4 35 44-78 2-37 (450)
135 3nks_A Protoporphyrinogen oxid 97.5 5.5E-05 1.9E-09 79.6 3.9 36 47-82 3-41 (477)
136 2ywl_A Thioredoxin reductase r 97.4 5.5E-05 1.9E-09 68.2 3.2 32 47-78 2-34 (180)
137 3g3e_A D-amino-acid oxidase; F 97.4 4.5E-05 1.5E-09 76.9 2.7 31 48-78 2-39 (351)
138 1zk7_A HGII, reductase, mercur 97.4 6.5E-05 2.2E-09 78.9 3.9 35 44-78 2-37 (467)
139 1mo9_A ORF3; nucleotide bindin 97.4 7.6E-05 2.6E-09 79.6 4.4 63 219-291 263-326 (523)
140 3klj_A NAD(FAD)-dependent dehy 97.4 0.00033 1.1E-08 71.5 8.9 36 44-79 7-43 (385)
141 3lov_A Protoporphyrinogen oxid 97.4 6.7E-05 2.3E-09 78.9 3.8 36 46-81 4-42 (475)
142 4dsg_A UDP-galactopyranose mut 97.4 7.1E-05 2.4E-09 79.0 3.9 39 44-82 7-47 (484)
143 2vvm_A Monoamine oxidase N; FA 97.4 6.1E-05 2.1E-09 79.7 3.4 37 46-82 39-76 (495)
144 3ihm_A Styrene monooxygenase A 97.4 5.7E-05 2E-09 78.4 2.8 33 46-78 22-55 (430)
145 2hqm_A GR, grase, glutathione 97.4 6.3E-05 2.2E-09 79.3 3.1 35 44-78 9-44 (479)
146 2bi7_A UDP-galactopyranose mut 97.4 9.4E-05 3.2E-09 75.5 4.3 37 46-82 3-40 (384)
147 1ojt_A Surface protein; redox- 97.4 5.8E-05 2E-09 79.6 2.8 36 44-79 4-40 (482)
148 3dgz_A Thioredoxin reductase 2 97.4 5.9E-05 2E-09 79.7 2.8 35 44-78 4-39 (488)
149 1v59_A Dihydrolipoamide dehydr 97.4 5.3E-05 1.8E-09 79.9 2.2 36 44-79 3-39 (478)
150 1trb_A Thioredoxin reductase; 97.3 5.8E-05 2E-09 74.8 2.1 33 45-77 4-37 (320)
151 1dxl_A Dihydrolipoamide dehydr 97.3 0.00012 4.2E-09 76.9 4.3 37 44-80 4-41 (470)
152 2a87_A TRXR, TR, thioredoxin r 97.3 7.7E-05 2.6E-09 74.6 2.3 34 44-77 12-46 (335)
153 2iid_A L-amino-acid oxidase; f 97.3 0.00013 4.3E-09 77.4 4.0 39 44-82 31-70 (498)
154 2eq6_A Pyruvate dehydrogenase 97.3 8.8E-05 3E-09 77.9 2.8 34 45-78 5-39 (464)
155 2qae_A Lipoamide, dihydrolipoy 97.3 0.00011 3.8E-09 77.2 3.4 35 46-80 2-37 (468)
156 1onf_A GR, grase, glutathione 97.3 0.00012 4.1E-09 77.6 3.5 33 46-78 2-35 (500)
157 2a8x_A Dihydrolipoyl dehydroge 97.2 8.9E-05 3E-09 77.8 2.4 32 46-77 3-35 (464)
158 1fl2_A Alkyl hydroperoxide red 97.2 0.00012 4.2E-09 72.0 3.3 31 46-76 1-32 (310)
159 2q0l_A TRXR, thioredoxin reduc 97.2 0.0001 3.6E-09 72.6 2.7 31 47-77 2-34 (311)
160 3k30_A Histamine dehydrogenase 97.2 0.00023 8E-09 78.5 5.8 39 43-81 388-427 (690)
161 1vg0_A RAB proteins geranylger 97.2 0.00014 4.9E-09 78.2 3.9 41 44-84 6-47 (650)
162 2aqj_A Tryptophan halogenase, 97.2 0.00014 4.7E-09 77.9 3.7 36 44-79 3-42 (538)
163 2yqu_A 2-oxoglutarate dehydrog 97.2 0.00012 4E-09 76.7 3.1 35 46-80 1-36 (455)
164 2dkh_A 3-hydroxybenzoate hydro 97.2 0.00018 6E-09 78.7 4.5 36 44-79 30-67 (639)
165 1zmd_A Dihydrolipoyl dehydroge 97.2 0.00012 4E-09 77.2 2.9 36 45-80 5-41 (474)
166 1vdc_A NTR, NADPH dependent th 97.2 6.8E-05 2.3E-09 74.8 1.0 32 45-76 7-39 (333)
167 1lvl_A Dihydrolipoamide dehydr 97.2 0.00013 4.6E-09 76.3 3.2 34 45-78 4-38 (458)
168 3g5s_A Methylenetetrahydrofola 97.2 0.00016 5.4E-09 72.5 3.2 34 47-80 2-36 (443)
169 1ebd_A E3BD, dihydrolipoamide 97.2 0.00013 4.6E-09 76.3 2.9 32 46-77 3-35 (455)
170 4gut_A Lysine-specific histone 97.1 0.00021 7E-09 79.4 4.1 39 44-82 334-373 (776)
171 4hb9_A Similarities with proba 97.1 0.00023 7.7E-09 73.0 3.4 32 48-79 3-35 (412)
172 1b37_A Protein (polyamine oxid 97.1 0.00022 7.4E-09 75.0 3.2 38 45-82 3-42 (472)
173 2vdc_G Glutamate synthase [NAD 97.1 0.00039 1.3E-08 72.6 5.0 37 44-80 120-157 (456)
174 2e4g_A Tryptophan halogenase; 97.0 0.00035 1.2E-08 74.9 4.6 36 44-79 23-62 (550)
175 2pyx_A Tryptophan halogenase; 97.0 0.00024 8.2E-09 75.8 3.1 36 44-79 5-53 (526)
176 2v3a_A Rubredoxin reductase; a 97.0 0.00034 1.2E-08 71.3 3.9 35 44-78 2-39 (384)
177 2wpf_A Trypanothione reductase 97.0 0.00027 9.4E-09 74.7 3.1 34 43-76 4-39 (495)
178 1fec_A Trypanothione reductase 97.0 0.00037 1.3E-08 73.6 3.7 31 45-75 2-34 (490)
179 2x8g_A Thioredoxin glutathione 97.0 0.0003 1E-08 76.3 3.0 34 44-77 105-139 (598)
180 3c4a_A Probable tryptophan hyd 96.9 0.00037 1.3E-08 71.0 3.5 34 47-80 1-37 (381)
181 2bc0_A NADH oxidase; flavoprot 96.9 0.00044 1.5E-08 73.0 4.2 34 46-79 35-72 (490)
182 1q1r_A Putidaredoxin reductase 96.9 0.00039 1.3E-08 72.1 3.8 59 219-291 199-259 (431)
183 2weu_A Tryptophan 5-halogenase 96.9 0.00028 9.6E-09 74.9 2.3 34 46-79 2-39 (511)
184 1ps9_A 2,4-dienoyl-COA reducta 96.9 0.00092 3.1E-08 73.5 6.2 38 44-81 371-409 (671)
185 2z3y_A Lysine-specific histone 96.8 0.00078 2.7E-08 73.9 4.7 39 44-82 105-144 (662)
186 1xdi_A RV3303C-LPDA; reductase 96.8 0.00051 1.7E-08 72.7 3.1 33 46-78 2-38 (499)
187 1m6i_A Programmed cell death p 96.8 0.00065 2.2E-08 71.8 3.8 38 43-80 8-48 (493)
188 1xhc_A NADH oxidase /nitrite r 96.8 0.00065 2.2E-08 68.8 3.6 34 46-80 8-42 (367)
189 1o94_A Tmadh, trimethylamine d 96.7 0.00097 3.3E-08 73.9 5.1 38 44-81 387-425 (729)
190 1pn0_A Phenol 2-monooxygenase; 96.7 0.00053 1.8E-08 75.2 2.8 35 45-79 7-47 (665)
191 3kd9_A Coenzyme A disulfide re 96.7 0.00086 2.9E-08 69.9 4.0 35 46-80 3-40 (449)
192 2gqw_A Ferredoxin reductase; f 96.7 0.00097 3.3E-08 68.6 4.1 36 45-80 6-44 (408)
193 2cdu_A NADPH oxidase; flavoenz 96.6 0.00082 2.8E-08 70.1 3.5 33 47-79 1-36 (452)
194 2xag_A Lysine-specific histone 96.6 0.0012 4.3E-08 73.8 4.7 39 44-82 276-315 (852)
195 3iwa_A FAD-dependent pyridine 96.6 0.00095 3.2E-08 70.1 3.5 58 219-291 210-267 (472)
196 1mo9_A ORF3; nucleotide bindin 96.6 0.012 4.2E-07 62.4 12.2 33 47-79 215-248 (523)
197 3oc4_A Oxidoreductase, pyridin 96.6 0.0011 3.8E-08 69.1 3.7 35 47-81 3-40 (452)
198 3ab1_A Ferredoxin--NADP reduct 96.5 0.016 5.4E-07 58.1 12.0 59 223-291 214-272 (360)
199 2v3a_A Rubredoxin reductase; a 96.5 0.011 3.8E-07 59.9 10.9 33 47-79 146-179 (384)
200 2gag_A Heterotetrameric sarcos 96.5 0.00095 3.3E-08 76.3 3.0 62 220-291 325-392 (965)
201 1trb_A Thioredoxin reductase; 96.4 0.016 5.3E-07 56.9 11.1 56 222-287 195-252 (320)
202 3cgb_A Pyridine nucleotide-dis 96.4 0.0015 5E-08 68.8 3.4 35 46-80 36-73 (480)
203 1nhp_A NADH peroxidase; oxidor 96.4 0.0015 5.2E-08 68.0 3.5 34 47-80 1-37 (447)
204 3ics_A Coenzyme A-disulfide re 96.4 0.0017 5.7E-08 70.3 3.8 37 44-80 34-73 (588)
205 1lqt_A FPRA; NADP+ derivative, 96.4 0.0017 5.8E-08 67.7 3.7 36 45-80 2-45 (456)
206 1fl2_A Alkyl hydroperoxide red 96.4 0.017 5.8E-07 56.4 10.8 54 224-287 193-247 (310)
207 1cjc_A Protein (adrenodoxin re 96.4 0.0018 6.3E-08 67.5 3.9 37 45-81 5-44 (460)
208 3cty_A Thioredoxin reductase; 96.4 0.0083 2.8E-07 59.0 8.5 57 224-290 203-260 (319)
209 1y56_A Hypothetical protein PH 96.3 0.0015 5.3E-08 68.8 2.7 37 45-81 107-143 (493)
210 1gte_A Dihydropyrimidine dehyd 96.2 0.0021 7.3E-08 73.9 3.9 36 45-80 186-223 (1025)
211 3h28_A Sulfide-quinone reducta 96.2 0.0022 7.4E-08 66.4 3.3 34 47-80 3-39 (430)
212 3sx6_A Sulfide-quinone reducta 96.2 0.0027 9.4E-08 65.8 4.0 35 46-80 4-42 (437)
213 1q1r_A Putidaredoxin reductase 96.1 0.021 7.1E-07 59.0 10.1 33 47-79 150-183 (431)
214 3h8l_A NADH oxidase; membrane 96.0 0.0026 8.8E-08 65.3 3.0 34 47-80 2-39 (409)
215 2eq6_A Pyruvate dehydrogenase 96.0 0.022 7.6E-07 59.4 10.2 33 47-79 170-203 (464)
216 2yqu_A 2-oxoglutarate dehydrog 96.0 0.016 5.4E-07 60.3 8.8 33 47-79 168-201 (455)
217 2q0l_A TRXR, thioredoxin reduc 95.9 0.04 1.4E-06 53.7 10.7 58 223-290 191-249 (311)
218 2qae_A Lipoamide, dihydrolipoy 95.9 0.035 1.2E-06 57.9 10.7 33 47-79 175-208 (468)
219 3ayj_A Pro-enzyme of L-phenyla 95.8 0.0029 9.8E-08 69.0 2.4 36 45-80 55-100 (721)
220 3ntd_A FAD-dependent pyridine 95.8 0.0044 1.5E-07 66.6 3.5 34 47-80 2-38 (565)
221 2zbw_A Thioredoxin reductase; 95.8 0.052 1.8E-06 53.5 11.1 58 223-291 203-261 (335)
222 3urh_A Dihydrolipoyl dehydroge 95.7 0.047 1.6E-06 57.3 11.2 32 48-79 200-232 (491)
223 4eqs_A Coenzyme A disulfide re 95.7 0.0059 2E-07 63.3 4.0 33 48-80 2-37 (437)
224 3ic9_A Dihydrolipoamide dehydr 95.7 0.04 1.4E-06 57.9 10.4 33 47-79 175-208 (492)
225 1ebd_A E3BD, dihydrolipoamide 95.7 0.061 2.1E-06 55.8 11.7 32 47-78 171-203 (455)
226 4g6h_A Rotenone-insensitive NA 95.6 0.008 2.7E-07 63.4 4.7 36 44-79 40-76 (502)
227 3vrd_B FCCB subunit, flavocyto 95.6 0.0058 2E-07 62.4 3.4 33 48-80 4-39 (401)
228 2q7v_A Thioredoxin reductase; 95.5 0.073 2.5E-06 52.3 11.0 54 223-287 200-254 (325)
229 1v59_A Dihydrolipoamide dehydr 95.5 0.043 1.5E-06 57.4 9.6 33 47-79 184-217 (478)
230 2hqm_A GR, grase, glutathione 95.4 0.024 8.3E-07 59.4 7.6 32 48-79 187-219 (479)
231 2r9z_A Glutathione amide reduc 95.4 0.071 2.4E-06 55.5 11.1 31 48-78 168-199 (463)
232 3cgb_A Pyridine nucleotide-dis 95.3 0.031 1.1E-06 58.6 8.0 33 46-78 186-219 (480)
233 3lad_A Dihydrolipoamide dehydr 95.3 0.085 2.9E-06 55.1 11.3 33 47-79 181-214 (476)
234 1ges_A Glutathione reductase; 95.2 0.046 1.6E-06 56.7 8.8 33 47-79 168-201 (450)
235 3iwa_A FAD-dependent pyridine 95.1 0.11 3.7E-06 54.2 11.5 33 47-79 160-194 (472)
236 1zmd_A Dihydrolipoyl dehydroge 95.1 0.072 2.5E-06 55.6 10.1 33 47-79 179-212 (474)
237 2a8x_A Dihydrolipoyl dehydroge 95.1 0.053 1.8E-06 56.5 8.9 33 47-79 172-205 (464)
238 2cdu_A NADPH oxidase; flavoenz 95.1 0.06 2.1E-06 55.8 9.1 33 47-79 150-183 (452)
239 1xdi_A RV3303C-LPDA; reductase 95.0 0.042 1.4E-06 57.8 7.8 33 47-79 183-216 (499)
240 1dxl_A Dihydrolipoamide dehydr 95.0 0.044 1.5E-06 57.2 7.8 33 47-79 178-211 (470)
241 3ntd_A FAD-dependent pyridine 95.0 0.11 3.9E-06 55.4 11.2 32 48-79 153-185 (565)
242 1onf_A GR, grase, glutathione 94.8 0.1 3.5E-06 54.9 10.3 32 48-79 178-210 (500)
243 3s5w_A L-ornithine 5-monooxyge 94.8 0.099 3.4E-06 54.2 10.0 34 46-79 227-263 (463)
244 3hyw_A Sulfide-quinone reducta 94.8 0.013 4.5E-07 60.4 3.2 56 220-291 209-264 (430)
245 1ojt_A Surface protein; redox- 94.7 0.077 2.6E-06 55.5 8.9 33 47-79 186-219 (482)
246 3dgh_A TRXR-1, thioredoxin red 94.7 0.11 3.7E-06 54.4 10.0 55 223-287 239-294 (483)
247 3ics_A Coenzyme A-disulfide re 94.6 0.097 3.3E-06 56.3 9.7 33 47-79 188-221 (588)
248 3dgz_A Thioredoxin reductase 2 94.5 0.13 4.5E-06 53.8 10.2 30 48-77 187-217 (488)
249 3o0h_A Glutathione reductase; 94.5 0.085 2.9E-06 55.2 8.6 33 47-79 192-225 (484)
250 3dk9_A Grase, GR, glutathione 94.4 0.24 8.1E-06 51.6 11.7 33 47-79 188-221 (478)
251 3oc4_A Oxidoreductase, pyridin 94.2 0.12 4.1E-06 53.6 8.9 33 47-79 148-181 (452)
252 3lzw_A Ferredoxin--NADP reduct 94.0 0.15 5.2E-06 49.8 8.9 57 224-291 202-259 (332)
253 4dna_A Probable glutathione re 93.9 0.085 2.9E-06 54.9 7.2 32 47-78 171-203 (463)
254 3qfa_A Thioredoxin reductase 1 93.1 0.5 1.7E-05 49.8 11.5 30 48-77 212-242 (519)
255 4b1b_A TRXR, thioredoxin reduc 93.0 0.43 1.5E-05 50.5 10.7 30 48-77 225-255 (542)
256 1fec_A Trypanothione reductase 92.9 0.31 1.1E-05 51.0 9.5 56 222-291 242-299 (490)
257 1m6i_A Programmed cell death p 92.8 0.43 1.5E-05 50.0 10.3 55 222-291 237-291 (493)
258 2wpf_A Trypanothione reductase 92.8 0.36 1.2E-05 50.5 9.7 50 222-285 246-295 (495)
259 4g6h_A Rotenone-insensitive NA 92.4 0.45 1.5E-05 49.9 9.8 32 48-79 219-265 (502)
260 2gag_A Heterotetrameric sarcos 92.2 0.39 1.4E-05 54.7 9.8 31 48-78 286-317 (965)
261 1nhp_A NADH peroxidase; oxidor 92.0 0.085 2.9E-06 54.6 3.6 35 45-79 148-183 (447)
262 4gcm_A TRXR, thioredoxin reduc 91.9 0.11 3.6E-06 50.7 4.1 33 48-80 147-180 (312)
263 3fwz_A Inner membrane protein 91.3 0.16 5.5E-06 43.0 4.1 32 47-78 8-40 (140)
264 3llv_A Exopolyphosphatase-rela 91.0 0.12 4.2E-06 43.7 3.0 30 48-77 8-38 (141)
265 3klj_A NAD(FAD)-dependent dehy 91.0 0.12 4.1E-06 52.3 3.3 33 48-80 148-181 (385)
266 2g1u_A Hypothetical protein TM 90.9 0.13 4.5E-06 44.4 3.2 33 46-78 19-52 (155)
267 1gte_A Dihydropyrimidine dehyd 90.7 0.57 2E-05 53.8 9.1 31 48-78 334-366 (1025)
268 1lss_A TRK system potassium up 90.5 0.15 5.2E-06 42.8 3.2 30 48-77 6-36 (140)
269 1lvl_A Dihydrolipoamide dehydr 90.1 0.16 5.4E-06 52.8 3.4 34 47-80 172-206 (458)
270 4a5l_A Thioredoxin reductase; 90.0 0.2 6.9E-06 48.6 4.0 33 47-79 153-186 (314)
271 3k30_A Histamine dehydrogenase 90.0 0.73 2.5E-05 50.4 8.8 32 48-79 525-559 (690)
272 1id1_A Putative potassium chan 89.9 0.21 7.1E-06 43.0 3.6 30 48-77 5-35 (153)
273 1xhc_A NADH oxidase /nitrite r 89.3 0.17 6E-06 50.7 3.0 34 47-80 144-178 (367)
274 2gqw_A Ferredoxin reductase; f 87.5 0.32 1.1E-05 49.6 3.6 35 46-80 145-180 (408)
275 3ic5_A Putative saccharopine d 87.4 0.31 1E-05 39.4 2.8 31 48-78 7-39 (118)
276 2gv8_A Monooxygenase; FMO, FAD 87.1 0.37 1.3E-05 49.6 3.8 33 47-79 213-247 (447)
277 2hmt_A YUAA protein; RCK, KTN, 86.9 0.29 9.9E-06 41.2 2.4 30 48-77 8-38 (144)
278 2bc0_A NADH oxidase; flavoprot 86.8 0.36 1.2E-05 50.5 3.6 34 47-80 195-229 (490)
279 3d1c_A Flavin-containing putat 86.5 0.34 1.2E-05 48.2 3.0 32 48-79 168-200 (369)
280 2xve_A Flavin-containing monoo 86.2 0.44 1.5E-05 49.4 3.9 33 47-79 198-231 (464)
281 4eqs_A Coenzyme A disulfide re 86.2 0.43 1.5E-05 49.1 3.7 33 48-80 149-182 (437)
282 3gwf_A Cyclohexanone monooxyge 85.9 0.54 1.8E-05 49.8 4.3 34 46-79 178-212 (540)
283 3uox_A Otemo; baeyer-villiger 85.7 0.51 1.7E-05 50.0 4.1 34 47-80 186-220 (545)
284 3kd9_A Coenzyme A disulfide re 85.0 0.51 1.8E-05 48.6 3.6 33 48-80 150-183 (449)
285 1vdc_A NTR, NADPH dependent th 84.9 0.62 2.1E-05 45.5 4.0 57 223-287 207-264 (333)
286 3l4b_C TRKA K+ channel protien 84.8 0.39 1.3E-05 44.0 2.3 30 49-78 3-33 (218)
287 2a87_A TRXR, TR, thioredoxin r 84.4 0.68 2.3E-05 45.4 4.1 33 47-79 156-189 (335)
288 3ef6_A Toluene 1,2-dioxygenase 84.2 0.55 1.9E-05 47.7 3.4 34 47-80 144-178 (410)
289 2bcg_G Secretory pathway GDP d 83.8 0.86 3E-05 47.0 4.7 62 205-281 236-299 (453)
290 4ap3_A Steroid monooxygenase; 83.7 0.61 2.1E-05 49.5 3.6 33 47-79 192-225 (549)
291 1zk7_A HGII, reductase, mercur 83.4 0.64 2.2E-05 48.1 3.5 34 47-80 177-211 (467)
292 3hn2_A 2-dehydropantoate 2-red 83.2 0.7 2.4E-05 45.0 3.5 31 48-78 4-35 (312)
293 4g65_A TRK system potassium up 82.9 0.67 2.3E-05 47.9 3.4 31 48-78 5-36 (461)
294 3i83_A 2-dehydropantoate 2-red 82.8 0.68 2.3E-05 45.3 3.2 31 48-78 4-35 (320)
295 3itj_A Thioredoxin reductase 1 82.1 0.93 3.2E-05 44.2 4.0 35 46-80 173-208 (338)
296 1f0y_A HCDH, L-3-hydroxyacyl-C 81.6 0.9 3.1E-05 44.0 3.6 31 48-78 17-48 (302)
297 3l8k_A Dihydrolipoyl dehydroge 81.6 0.81 2.8E-05 47.4 3.4 34 47-80 173-207 (466)
298 3ado_A Lambda-crystallin; L-gu 81.5 0.73 2.5E-05 45.0 2.8 30 48-77 8-38 (319)
299 2x8g_A Thioredoxin glutathione 81.4 0.75 2.6E-05 49.4 3.2 30 48-77 288-318 (598)
300 3lxd_A FAD-dependent pyridine 81.4 0.88 3E-05 46.2 3.6 34 47-80 153-187 (415)
301 3oj0_A Glutr, glutamyl-tRNA re 81.2 0.93 3.2E-05 38.3 3.1 31 48-78 23-54 (144)
302 1vg0_A RAB proteins geranylger 81.2 1.9 6.6E-05 46.3 6.2 65 203-280 370-435 (650)
303 3fg2_P Putative rubredoxin red 80.9 0.89 3.1E-05 46.0 3.4 34 47-80 143-177 (404)
304 3fbs_A Oxidoreductase; structu 80.5 1.3 4.4E-05 42.2 4.3 33 46-79 141-174 (297)
305 1kyq_A Met8P, siroheme biosynt 80.4 0.81 2.8E-05 43.5 2.7 32 46-77 13-45 (274)
306 3dfz_A SIRC, precorrin-2 dehyd 80.1 1.1 3.8E-05 41.2 3.4 31 46-76 31-62 (223)
307 3c85_A Putative glutathione-re 79.8 1 3.5E-05 39.8 3.1 32 47-78 40-73 (183)
308 3g17_A Similar to 2-dehydropan 79.7 0.78 2.7E-05 44.3 2.4 31 48-78 4-35 (294)
309 1d5t_A Guanine nucleotide diss 79.5 0.93 3.2E-05 46.4 3.0 62 205-281 228-289 (433)
310 1hyu_A AHPF, alkyl hydroperoxi 79.3 1 3.4E-05 47.5 3.2 34 47-80 356-390 (521)
311 2cul_A Glucose-inhibited divis 79.1 2.2 7.6E-05 39.3 5.3 48 220-282 77-125 (232)
312 1jw9_B Molybdopterin biosynthe 78.9 1.1 3.7E-05 42.1 3.0 34 46-79 31-66 (249)
313 3ghy_A Ketopantoate reductase 78.5 1 3.5E-05 44.4 2.8 30 48-77 5-35 (335)
314 2raf_A Putative dinucleotide-b 78.4 1.3 4.6E-05 40.2 3.4 32 47-78 20-52 (209)
315 1ks9_A KPA reductase;, 2-dehyd 78.2 1.2 4.2E-05 42.4 3.3 30 49-78 3-33 (291)
316 3f8d_A Thioredoxin reductase ( 78.0 1.3 4.5E-05 42.7 3.4 35 46-80 154-189 (323)
317 4e12_A Diketoreductase; oxidor 77.8 1.4 4.8E-05 42.1 3.6 31 48-78 6-37 (283)
318 3l9w_A Glutathione-regulated p 77.6 1.2 4E-05 45.4 3.0 32 47-78 5-37 (413)
319 3rui_A Ubiquitin-like modifier 76.2 2 6.8E-05 42.2 4.1 36 46-81 34-71 (340)
320 3r9u_A Thioredoxin reductase; 75.8 1.8 6.1E-05 41.6 3.7 34 47-80 148-182 (315)
321 4a9w_A Monooxygenase; baeyer-v 75.7 1.9 6.5E-05 42.2 4.0 31 47-78 164-195 (357)
322 2ew2_A 2-dehydropantoate 2-red 75.5 1.5 5E-05 42.4 3.0 30 48-77 5-35 (316)
323 2aef_A Calcium-gated potassium 75.3 1.3 4.3E-05 41.0 2.4 31 47-78 10-41 (234)
324 1lld_A L-lactate dehydrogenase 75.2 1.7 5.7E-05 42.4 3.3 32 47-78 8-42 (319)
325 1bg6_A N-(1-D-carboxylethyl)-L 75.1 1.6 5.4E-05 43.2 3.2 31 47-77 5-36 (359)
326 2a9f_A Putative malic enzyme ( 74.9 1.7 5.8E-05 43.4 3.2 35 45-79 187-223 (398)
327 3hwr_A 2-dehydropantoate 2-red 74.8 1.6 5.3E-05 42.7 3.0 28 47-74 20-48 (318)
328 2ewd_A Lactate dehydrogenase,; 73.7 2.1 7.2E-05 41.7 3.6 32 47-78 5-38 (317)
329 1jay_A Coenzyme F420H2:NADP+ o 73.6 2.3 7.7E-05 38.5 3.6 29 49-77 3-33 (212)
330 1txg_A Glycerol-3-phosphate de 72.7 1.9 6.5E-05 42.2 3.1 28 49-76 3-31 (335)
331 1cjc_A Protein (adrenodoxin re 72.7 2.3 7.7E-05 43.9 3.7 53 223-284 269-335 (460)
332 1vl6_A Malate oxidoreductase; 72.6 2.1 7.1E-05 42.7 3.2 36 45-80 191-228 (388)
333 2y0c_A BCEC, UDP-glucose dehyd 72.6 1.8 6.3E-05 44.8 3.0 32 46-77 8-40 (478)
334 3k96_A Glycerol-3-phosphate de 72.4 2.5 8.7E-05 41.9 3.9 31 47-77 30-61 (356)
335 2dpo_A L-gulonate 3-dehydrogen 71.9 2 6.7E-05 42.0 2.8 31 48-78 8-39 (319)
336 2vdc_G Glutamate synthase [NAD 71.8 1.9 6.6E-05 44.4 2.9 33 47-79 265-299 (456)
337 4dio_A NAD(P) transhydrogenase 71.8 2.1 7E-05 43.1 3.0 33 46-78 190-223 (405)
338 3ego_A Probable 2-dehydropanto 71.5 2.6 8.8E-05 40.9 3.6 31 48-78 4-34 (307)
339 1zcj_A Peroxisomal bifunctiona 71.4 2.4 8.1E-05 43.8 3.5 31 48-78 39-70 (463)
340 3p2y_A Alanine dehydrogenase/p 71.1 2.2 7.4E-05 42.6 3.0 33 46-78 184-217 (381)
341 1mv8_A GMD, GDP-mannose 6-dehy 71.1 2.4 8.3E-05 43.3 3.5 29 49-77 3-32 (436)
342 1nyt_A Shikimate 5-dehydrogena 70.1 2.4 8.3E-05 40.2 3.0 30 48-77 121-151 (271)
343 1z82_A Glycerol-3-phosphate de 70.1 2.5 8.4E-05 41.5 3.2 32 46-77 14-46 (335)
344 3ond_A Adenosylhomocysteinase; 69.9 2.4 8.1E-05 43.7 3.0 31 47-77 266-297 (488)
345 1o94_A Tmadh, trimethylamine d 69.8 2.4 8.2E-05 46.6 3.3 32 47-78 529-563 (729)
346 2vns_A Metalloreductase steap3 69.8 2.6 8.7E-05 38.4 3.0 30 48-77 30-60 (215)
347 2vvm_A Monoamine oxidase N; FA 69.8 5.3 0.00018 41.4 5.8 49 217-280 261-310 (495)
348 1pzg_A LDH, lactate dehydrogen 69.6 3.3 0.00011 40.6 3.9 32 47-78 10-43 (331)
349 2v6b_A L-LDH, L-lactate dehydr 69.5 2.5 8.6E-05 40.9 3.0 29 49-77 3-34 (304)
350 3k6j_A Protein F01G10.3, confi 69.3 3.6 0.00012 42.2 4.3 32 47-78 55-87 (460)
351 3vh1_A Ubiquitin-like modifier 69.2 3.9 0.00013 43.2 4.5 35 46-80 327-363 (598)
352 3qha_A Putative oxidoreductase 68.9 4.4 0.00015 38.9 4.7 34 46-79 15-49 (296)
353 2eez_A Alanine dehydrogenase; 68.9 2.7 9.2E-05 41.9 3.2 32 47-78 167-199 (369)
354 1zud_1 Adenylyltransferase THI 68.9 3.3 0.00011 38.8 3.6 34 46-79 28-63 (251)
355 3gg2_A Sugar dehydrogenase, UD 68.6 2.6 8.8E-05 43.4 3.0 31 48-78 4-35 (450)
356 3h8v_A Ubiquitin-like modifier 68.5 2.8 9.6E-05 40.2 3.1 35 45-79 35-71 (292)
357 3lk7_A UDP-N-acetylmuramoylala 68.3 3.5 0.00012 42.4 4.0 32 47-78 10-42 (451)
358 4dll_A 2-hydroxy-3-oxopropiona 68.3 3.7 0.00013 40.0 4.0 32 47-78 32-64 (320)
359 1evy_A Glycerol-3-phosphate de 68.1 2.5 8.4E-05 42.1 2.7 30 48-77 17-47 (366)
360 2ywl_A Thioredoxin reductase r 67.9 4.5 0.00015 35.2 4.1 54 219-291 64-117 (180)
361 1x13_A NAD(P) transhydrogenase 67.6 2.8 9.6E-05 42.3 3.0 33 46-78 172-205 (401)
362 3dtt_A NADP oxidoreductase; st 67.6 3.1 0.00011 38.7 3.2 33 46-78 19-52 (245)
363 3ius_A Uncharacterized conserv 67.2 3.8 0.00013 38.8 3.7 31 48-78 7-38 (286)
364 4gx0_A TRKA domain protein; me 67.1 4.9 0.00017 42.6 5.0 34 45-78 126-160 (565)
365 1w4x_A Phenylacetone monooxyge 66.9 3.3 0.00011 43.7 3.6 34 47-80 187-221 (542)
366 3tl2_A Malate dehydrogenase; c 66.8 3.9 0.00013 39.7 3.8 32 46-77 8-41 (315)
367 2hjr_A Malate dehydrogenase; m 66.8 3 0.0001 40.8 3.0 31 48-78 16-48 (328)
368 1pjc_A Protein (L-alanine dehy 66.5 3.2 0.00011 41.2 3.2 32 47-78 168-200 (361)
369 2pv7_A T-protein [includes: ch 66.4 3.7 0.00013 39.5 3.5 30 48-77 23-54 (298)
370 1lnq_A MTHK channels, potassiu 66.3 1.9 6.6E-05 42.3 1.5 31 47-78 116-147 (336)
371 3gpi_A NAD-dependent epimerase 66.3 3.4 0.00012 39.2 3.2 32 48-79 5-37 (286)
372 2vhw_A Alanine dehydrogenase; 66.2 3.3 0.00011 41.4 3.2 32 46-77 168-200 (377)
373 3nks_A Protoporphyrinogen oxid 66.1 2.3 7.9E-05 43.8 2.1 65 207-286 230-294 (477)
374 1a5z_A L-lactate dehydrogenase 66.0 3.2 0.00011 40.4 3.0 29 49-77 3-34 (319)
375 1t2d_A LDH-P, L-lactate dehydr 65.9 3.8 0.00013 40.0 3.5 32 47-78 5-38 (322)
376 1nvt_A Shikimate 5'-dehydrogen 65.8 3.8 0.00013 39.2 3.5 29 48-77 130-159 (287)
377 2h78_A Hibadh, 3-hydroxyisobut 65.6 3.9 0.00013 39.3 3.5 31 48-78 5-36 (302)
378 2uyy_A N-PAC protein; long-cha 65.3 4.4 0.00015 39.2 3.9 32 47-78 31-63 (316)
379 3phh_A Shikimate dehydrogenase 65.2 3.6 0.00012 39.0 3.0 32 47-78 119-151 (269)
380 3d4o_A Dipicolinate synthase s 65.2 3.6 0.00012 39.5 3.2 32 47-78 156-188 (293)
381 4gsl_A Ubiquitin-like modifier 65.2 3.7 0.00012 43.5 3.4 35 46-80 326-362 (615)
382 3pdu_A 3-hydroxyisobutyrate de 65.1 3.8 0.00013 39.1 3.3 31 48-78 3-34 (287)
383 3cky_A 2-hydroxymethyl glutara 64.8 4.4 0.00015 38.9 3.7 31 47-77 5-36 (301)
384 2egg_A AROE, shikimate 5-dehyd 64.6 4.2 0.00014 39.2 3.5 30 48-77 143-174 (297)
385 1l7d_A Nicotinamide nucleotide 64.5 3.5 0.00012 41.3 3.0 33 46-78 172-205 (384)
386 1leh_A Leucine dehydrogenase; 64.4 3.6 0.00012 40.8 3.0 30 47-76 174-204 (364)
387 3g0o_A 3-hydroxyisobutyrate de 64.4 3.6 0.00012 39.6 3.0 32 47-78 8-40 (303)
388 2rir_A Dipicolinate synthase, 64.1 3.9 0.00013 39.4 3.2 33 46-78 157-190 (300)
389 3doj_A AT3G25530, dehydrogenas 64.0 3.7 0.00013 39.7 3.0 32 47-78 22-54 (310)
390 3ew7_A LMO0794 protein; Q8Y8U8 63.9 4.3 0.00015 36.5 3.3 30 49-78 3-34 (221)
391 1hyh_A L-hicdh, L-2-hydroxyiso 63.9 3.8 0.00013 39.7 3.0 30 48-77 3-35 (309)
392 3pef_A 6-phosphogluconate dehy 63.8 3.8 0.00013 39.1 3.0 31 48-78 3-34 (287)
393 1k0i_A P-hydroxybenzoate hydro 63.8 7.2 0.00024 38.9 5.2 56 217-283 109-164 (394)
394 3h5n_A MCCB protein; ubiquitin 63.8 4.1 0.00014 40.3 3.3 33 46-78 118-152 (353)
395 3mog_A Probable 3-hydroxybutyr 63.7 3.4 0.00012 42.8 2.8 31 48-78 7-38 (483)
396 1yqg_A Pyrroline-5-carboxylate 63.7 3.9 0.00013 38.3 3.0 29 49-77 3-33 (263)
397 3h2s_A Putative NADH-flavin re 63.6 4.1 0.00014 36.8 3.1 29 49-77 3-33 (224)
398 2f1k_A Prephenate dehydrogenas 63.3 3.9 0.00013 38.7 3.0 29 49-77 3-32 (279)
399 1p77_A Shikimate 5-dehydrogena 63.1 3 0.0001 39.5 2.1 31 48-78 121-152 (272)
400 4ezb_A Uncharacterized conserv 62.8 4.9 0.00017 39.1 3.6 31 48-78 26-58 (317)
401 1vpd_A Tartronate semialdehyde 62.8 4.7 0.00016 38.6 3.5 30 48-77 7-37 (299)
402 4gx0_A TRKA domain protein; me 62.7 4.4 0.00015 43.0 3.5 34 47-80 349-383 (565)
403 2x5o_A UDP-N-acetylmuramoylala 62.5 3.7 0.00013 42.0 2.8 32 48-79 7-39 (439)
404 4e21_A 6-phosphogluconate dehy 62.4 4.3 0.00015 40.2 3.2 35 44-78 20-55 (358)
405 3dqp_A Oxidoreductase YLBE; al 62.2 5.4 0.00018 36.0 3.6 30 49-78 3-34 (219)
406 4g65_A TRK system potassium up 62.2 5 0.00017 41.3 3.7 32 47-78 236-267 (461)
407 3vtf_A UDP-glucose 6-dehydroge 62.2 5.8 0.0002 40.4 4.1 34 45-78 20-54 (444)
408 3o38_A Short chain dehydrogena 62.2 4.1 0.00014 38.2 2.9 30 48-77 24-56 (266)
409 1yj8_A Glycerol-3-phosphate de 61.7 3.7 0.00013 40.9 2.6 32 48-79 23-62 (375)
410 3e8x_A Putative NAD-dependent 61.7 4.7 0.00016 36.9 3.1 31 48-78 23-55 (236)
411 1hdo_A Biliverdin IX beta redu 61.5 5 0.00017 35.6 3.2 31 48-78 5-37 (206)
412 2hk9_A Shikimate dehydrogenase 61.5 4.5 0.00015 38.4 3.0 30 48-77 131-161 (275)
413 1lu9_A Methylene tetrahydromet 61.4 4.6 0.00016 38.5 3.1 31 47-77 120-152 (287)
414 1dlj_A UDP-glucose dehydrogena 61.3 5.2 0.00018 40.4 3.6 30 49-78 3-32 (402)
415 1x0v_A GPD-C, GPDH-C, glycerol 61.0 3.5 0.00012 40.7 2.2 32 48-79 10-49 (354)
416 2gf2_A Hibadh, 3-hydroxyisobut 60.8 5.5 0.00019 38.0 3.6 30 49-78 3-33 (296)
417 3c7a_A Octopine dehydrogenase; 60.6 4.8 0.00016 40.5 3.2 28 48-75 4-33 (404)
418 3ojo_A CAP5O; rossmann fold, c 60.5 4.6 0.00016 41.1 3.0 31 48-78 13-44 (431)
419 1c1d_A L-phenylalanine dehydro 60.4 4.7 0.00016 39.8 3.0 31 46-76 175-206 (355)
420 3fbt_A Chorismate mutase and s 60.2 6 0.0002 37.7 3.6 33 46-78 122-156 (282)
421 1guz_A Malate dehydrogenase; o 60.1 4.9 0.00017 38.9 3.1 30 49-78 3-35 (310)
422 3dfu_A Uncharacterized protein 60.1 3.7 0.00013 37.9 2.1 29 48-76 8-37 (232)
423 3ggo_A Prephenate dehydrogenas 60.0 4.8 0.00016 39.1 3.0 32 47-78 34-68 (314)
424 3qsg_A NAD-binding phosphogluc 60.0 4.9 0.00017 38.9 3.0 31 47-77 25-57 (312)
425 3tnl_A Shikimate dehydrogenase 60.0 5.2 0.00018 38.8 3.2 31 47-77 155-187 (315)
426 2g5c_A Prephenate dehydrogenas 59.9 4.8 0.00017 38.1 3.0 29 49-77 4-35 (281)
427 3pqe_A L-LDH, L-lactate dehydr 59.8 5.9 0.0002 38.7 3.6 31 47-77 6-39 (326)
428 1lqt_A FPRA; NADP+ derivative, 59.7 6 0.0002 40.7 3.8 50 224-284 265-328 (456)
429 3k7m_X 6-hydroxy-L-nicotine ox 59.6 8.3 0.00028 38.9 4.9 45 220-280 213-257 (431)
430 3pid_A UDP-glucose 6-dehydroge 59.6 5.7 0.00019 40.4 3.5 32 47-78 37-68 (432)
431 3gvp_A Adenosylhomocysteinase 59.5 5 0.00017 40.6 3.0 32 46-77 220-252 (435)
432 3c24_A Putative oxidoreductase 59.4 5 0.00017 38.2 3.0 30 48-77 13-44 (286)
433 1pjq_A CYSG, siroheme synthase 58.9 5.1 0.00017 41.2 3.1 31 47-77 13-44 (457)
434 3jyo_A Quinate/shikimate dehyd 58.9 5.3 0.00018 38.1 3.0 31 47-77 128-160 (283)
435 4a7p_A UDP-glucose dehydrogena 58.9 6.1 0.00021 40.4 3.6 34 46-79 8-42 (446)
436 2weu_A Tryptophan 5-halogenase 58.7 8.2 0.00028 40.1 4.7 49 219-281 181-229 (511)
437 2zyd_A 6-phosphogluconate dehy 58.5 6 0.00021 40.9 3.6 32 46-77 15-47 (480)
438 3i6d_A Protoporphyrinogen oxid 58.5 10 0.00035 38.6 5.4 46 226-286 248-293 (470)
439 3don_A Shikimate dehydrogenase 58.4 5 0.00017 38.1 2.7 32 47-78 118-151 (277)
440 2wtb_A MFP2, fatty acid multif 58.2 5.4 0.00018 43.7 3.3 31 48-78 314-345 (725)
441 1y8q_A Ubiquitin-like 1 activa 58.0 5.5 0.00019 39.3 3.0 34 46-79 36-71 (346)
442 1ur5_A Malate dehydrogenase; o 57.9 5.5 0.00019 38.5 3.0 30 48-77 4-35 (309)
443 3o8q_A Shikimate 5-dehydrogena 57.7 7.1 0.00024 37.2 3.7 32 46-77 126-159 (281)
444 4huj_A Uncharacterized protein 57.6 2.9 0.0001 38.2 0.9 30 48-77 25-56 (220)
445 3u62_A Shikimate dehydrogenase 57.6 5.8 0.0002 37.1 3.0 31 48-78 110-142 (253)
446 1ff9_A Saccharopine reductase; 57.6 7.5 0.00026 39.8 4.1 30 48-77 5-35 (450)
447 3ce6_A Adenosylhomocysteinase; 57.4 5.5 0.00019 41.2 3.0 32 47-78 275-307 (494)
448 2pd4_A Enoyl-[acyl-carrier-pro 57.3 8.6 0.0003 36.2 4.3 30 49-78 9-42 (275)
449 1tt5_B Ubiquitin-activating en 57.1 6.1 0.00021 40.2 3.3 34 45-78 39-74 (434)
450 3r6d_A NAD-dependent epimerase 57.1 6.3 0.00022 35.6 3.1 30 49-78 8-40 (221)
451 2dkn_A 3-alpha-hydroxysteroid 57.1 6.7 0.00023 36.1 3.4 30 49-78 4-35 (255)
452 3l6d_A Putative oxidoreductase 56.3 7.7 0.00026 37.4 3.7 32 47-78 10-42 (306)
453 3n58_A Adenosylhomocysteinase; 55.6 6.4 0.00022 40.0 3.0 31 47-77 248-279 (464)
454 3qvo_A NMRA family protein; st 55.5 7.3 0.00025 35.7 3.3 31 48-78 25-58 (236)
455 1oju_A MDH, malate dehydrogena 55.5 6.5 0.00022 37.7 3.0 30 49-78 3-35 (294)
456 1edz_A 5,10-methylenetetrahydr 55.4 9 0.00031 37.1 4.0 33 45-77 176-210 (320)
457 2e4g_A Tryptophan halogenase; 55.3 7.9 0.00027 40.8 3.9 49 219-281 202-251 (550)
458 3pwz_A Shikimate dehydrogenase 55.2 6.8 0.00023 37.1 3.0 32 46-77 120-153 (272)
459 2yjz_A Metalloreductase steap4 60.0 2.5 8.7E-05 38.1 0.0 31 48-78 21-52 (201)
460 3t4e_A Quinate/shikimate dehyd 55.0 7.1 0.00024 37.8 3.2 31 47-77 149-181 (312)
461 2rcy_A Pyrroline carboxylate r 55.0 6.7 0.00023 36.6 3.0 31 48-78 6-41 (262)
462 3d1l_A Putative NADP oxidoredu 54.9 6.4 0.00022 36.9 2.8 30 48-77 12-43 (266)
463 1y6j_A L-lactate dehydrogenase 54.9 7.3 0.00025 37.9 3.3 33 46-78 7-42 (318)
464 1pgj_A 6PGDH, 6-PGDH, 6-phosph 54.8 6.2 0.00021 40.8 2.9 30 48-77 3-33 (478)
465 1i36_A Conserved hypothetical 54.8 5.6 0.00019 37.2 2.4 28 49-76 3-31 (264)
466 2d5c_A AROE, shikimate 5-dehyd 54.8 6.4 0.00022 36.9 2.8 30 48-77 118-148 (263)
467 3ldh_A Lactate dehydrogenase; 54.7 6.8 0.00023 38.2 3.0 32 46-77 21-55 (330)
468 2i6t_A Ubiquitin-conjugating e 54.5 6.9 0.00023 37.7 3.0 32 47-78 15-49 (303)
469 3ktd_A Prephenate dehydrogenas 54.5 6.4 0.00022 38.7 2.8 30 48-77 10-40 (341)
470 1zej_A HBD-9, 3-hydroxyacyl-CO 54.1 8.3 0.00028 36.9 3.5 32 47-78 13-44 (293)
471 3zwc_A Peroxisomal bifunctiona 53.9 7.5 0.00026 42.5 3.5 32 47-78 317-349 (742)
472 3gvi_A Malate dehydrogenase; N 53.8 7.2 0.00024 38.0 3.0 32 47-78 8-41 (324)
473 2h7i_A Enoyl-[acyl-carrier-pro 53.8 8.1 0.00028 36.2 3.4 30 49-78 10-43 (269)
474 2dbq_A Glyoxylate reductase; D 53.7 8.1 0.00028 37.8 3.5 32 47-78 151-183 (334)
475 3vps_A TUNA, NAD-dependent epi 53.7 7 0.00024 37.4 3.0 32 48-79 9-42 (321)
476 2izz_A Pyrroline-5-carboxylate 53.6 7.1 0.00024 37.9 3.0 32 47-78 23-59 (322)
477 1y8q_B Anthracycline-, ubiquit 53.5 7.2 0.00025 41.7 3.2 34 46-79 17-52 (640)
478 3vku_A L-LDH, L-lactate dehydr 53.3 7.4 0.00025 37.9 3.0 30 48-77 11-43 (326)
479 2dvm_A Malic enzyme, 439AA lon 53.3 6.9 0.00024 39.8 2.9 29 47-75 187-219 (439)
480 2ahr_A Putative pyrroline carb 53.1 9 0.00031 35.7 3.5 30 48-77 5-35 (259)
481 2wyu_A Enoyl-[acyl carrier pro 53.0 8.7 0.0003 35.8 3.5 29 49-77 11-43 (261)
482 3h9u_A Adenosylhomocysteinase; 53.0 7.4 0.00025 39.4 3.0 32 46-77 211-243 (436)
483 2gcg_A Glyoxylate reductase/hy 52.8 8.9 0.0003 37.4 3.5 32 47-78 156-188 (330)
484 3g79_A NDP-N-acetyl-D-galactos 52.7 9.1 0.00031 39.5 3.8 32 48-79 20-54 (478)
485 3oig_A Enoyl-[acyl-carrier-pro 52.7 9.4 0.00032 35.6 3.6 29 49-77 10-42 (266)
486 4ffl_A PYLC; amino acid, biosy 52.7 8.7 0.0003 37.9 3.5 31 49-79 4-35 (363)
487 2pzm_A Putative nucleotide sug 52.7 9.2 0.00031 37.0 3.7 31 48-78 22-54 (330)
488 1gpj_A Glutamyl-tRNA reductase 52.6 7.4 0.00025 39.2 3.0 32 46-77 167-200 (404)
489 3abi_A Putative uncharacterize 52.5 9.4 0.00032 37.8 3.8 32 46-77 16-47 (365)
490 3k31_A Enoyl-(acyl-carrier-pro 52.5 9.2 0.00031 36.5 3.6 30 48-77 32-65 (296)
491 2o2s_A Enoyl-acyl carrier redu 52.4 10 0.00035 36.5 4.0 28 49-76 12-43 (315)
492 2pgd_A 6-phosphogluconate dehy 52.4 7.7 0.00026 40.2 3.2 31 48-78 4-35 (482)
493 3p7m_A Malate dehydrogenase; p 52.2 7.8 0.00027 37.7 3.0 32 47-78 6-39 (321)
494 3eag_A UDP-N-acetylmuramate:L- 52.0 10 0.00034 36.9 3.8 32 48-79 6-39 (326)
495 1b37_A Protein (polyamine oxid 51.9 17 0.00057 37.3 5.7 43 526-570 422-464 (472)
496 1yb4_A Tartronic semialdehyde 51.7 6.7 0.00023 37.3 2.5 28 48-75 5-33 (295)
497 2d0i_A Dehydrogenase; structur 51.7 9.5 0.00032 37.3 3.6 33 46-78 146-179 (333)
498 1cyd_A Carbonyl reductase; sho 51.7 8.5 0.00029 35.3 3.1 29 49-77 10-40 (244)
499 2ydy_A Methionine adenosyltran 51.7 9 0.00031 36.7 3.4 30 49-78 5-36 (315)
500 1npy_A Hypothetical shikimate 51.7 9 0.00031 36.2 3.3 31 47-77 120-152 (271)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=3.9e-79 Score=656.96 Aligned_cols=492 Identities=22% Similarity=0.318 Sum_probs=359.5
Q ss_pred CccEEEECCCcchHHHHHhhcC--CCeEEEEecCCCCCCCCCcccchhhhhcc----CCCCCCCCCCcccCCCcccccCc
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL----SDLSSTSPSQRFISEDGVINSRA 119 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 119 (571)
+|||||||+|++||++|.||+| +.+|||||+|+.....+....|..+...+ .+|.|.+.+|....++.+.+++|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 6999999999999999999999 79999999998764444444454443333 26889999999999999999999
Q ss_pred ceecccccccCceecCCChhhhc-------cCCCChhhhhhhhhhhhccccc-------------------------CCC
Q 008281 120 RVLGGGSCLNAGFYTRAAPYYVR-------EVGWDERLVNESYQWVEKVVAF-------------------------EPP 167 (571)
Q Consensus 120 ~~lGG~s~~n~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~e~~~~~-------------------------~~~ 167 (571)
++|||+|++|+|+|.|+++.+++ ..+|+|+++.|||+++|+.... .+.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 99999999999999999985432 3689999999999999876421 011
Q ss_pred CchhHHHHHHHHHHc--CCCCCCCCccCCCCceeeeeEEEc---CCCceecHHH-hhh-hcCCCCcEEEcCcEEEEEEec
Q 008281 168 MRQWQSAVRDGLVEV--GVLPYNGFTYDHMYGTKIGGTIFD---QNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFR 240 (571)
Q Consensus 168 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~g~~~~~---~~g~r~~~~~-~l~-~~~~~g~~i~~~~~V~~i~~~ 240 (571)
..+....+.++++++ |++...++. .+...|...+. .+|.|+++.. ||. ...++|++|++++.|+||+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n----~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMG----TGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGG----GSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCC----CCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 234567888999988 875432222 22233332221 3789998876 765 667899999999999999998
Q ss_pred CCCCCCCeEEEEEEEeCCC-ceeEEeeecCCCeeEEEecCCcCcHHHHHhhc--------CCCCcccccCcccCCCCCCC
Q 008281 241 IKGKARPVAHGVVFRDATG-AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDN 311 (571)
Q Consensus 241 ~~~~~~~~~~gV~~~~~~g-~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~~~~p~VG~nl~dh 311 (571)
....+.++|+||++.+.+| +.++++ ++|+||||||+|+||+|||+|| ++||+++.|+|+||+|||||
T Consensus 238 ~~~~g~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH 313 (566)
T 3fim_B 238 GTTNGLPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDH 313 (566)
T ss_dssp EEETTEEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCC
T ss_pred cCCCCCCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcC
Confidence 1000113999999986556 666776 6799999999999999999999 89999999999999999999
Q ss_pred CCceEEecCCCcccch-h-hHh-hcchhhhhHHHhhcCCcccCCCCCCCCCCCccccc-----cccccCCCCCCCHHHHH
Q 008281 312 PMNAIFVPSPVPVEVS-L-IQV-VGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI-----GQLSKVPPKQRTPEAIA 383 (571)
Q Consensus 312 ~~~~v~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 383 (571)
+.+.+.+..+.+.... . ... .......+|.....|+.-... ....+++.... ..+.........++ ++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd-~~ 389 (566)
T 3fim_B 314 LLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALI---ANHLAWLRLPSNSSIFQTFPDPAAGPNSAH-WE 389 (566)
T ss_dssp EEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCS---CSEEEEECCCTTCGGGGTSCCCSSSTTSCS-EE
T ss_pred ccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccCh---hhheeeeccccchhhhhhhccccccCCCCC-EE
Confidence 9988777665443211 0 000 000112346555555421100 00011111000 00000000001111 00
Q ss_pred HHHhhh--c-cCC-CCCccceeEEEeecccccceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHHHHHHHHhccccc
Q 008281 384 EAIENM--K-ALD-DPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 459 (571)
Q Consensus 384 ~~~~~~--~-~~~-~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 459 (571)
.++... . ... .......++...+++|.|||+|+|+|+||.+.|+|++||+.+|.|++.++++++.+++++++.+++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~ 469 (566)
T 3fim_B 390 TIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWA 469 (566)
T ss_dssp EEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGT
T ss_pred EEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccC
Confidence 000000 0 000 001124456677899999999999999999999999999999999999999999999999998888
Q ss_pred ccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC------cccCCCCeEeccCCceEee
Q 008281 460 KFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVID 533 (571)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG------~VVD~~~rV~G~~NL~V~D 533 (571)
.+...+.. | .....+++++|++|+|....+.+|++|||||| +|||+++||||++||||||
T Consensus 470 ~~~~~~~~-----------P---~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvD 535 (566)
T 3fim_B 470 DFVIRPFD-----------P---RLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVD 535 (566)
T ss_dssp TTEEEESS-----------G---GGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECS
T ss_pred CccccccC-----------C---CcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcc
Confidence 77654421 1 00135689999999999999999999999998 7999999999999999999
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 008281 534 GSTFYYSPGTNPQATVMMLGRYMGVRILSE 563 (571)
Q Consensus 534 aSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 563 (571)
+||||+++++||++|+||||||+||.|+++
T Consensus 536 aSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 536 GSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp GGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999977654
No 2
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=3.1e-78 Score=651.13 Aligned_cols=498 Identities=42% Similarity=0.775 Sum_probs=377.6
Q ss_pred CCccccccccCCCCCCccEEEECCCcchHHHHHhhcCCCeEEEEecCCCCCCCCCcccchhhhhccCCC-CCCCCCCccc
Q 008281 31 NYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFGAALSDL-SSTSPSQRFI 109 (571)
Q Consensus 31 ~~~~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 109 (571)
.++|++++...++..+|||||||||++|+++|.||+||.||||||+|+....++....+..+...+.++ .|.+.+|...
T Consensus 11 ~~~~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~~ 90 (536)
T 1ju2_A 11 YLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFV 90 (536)
T ss_dssp GGGGEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEEE
T ss_pred cCccccCcccccccCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCcccc
Confidence 457777776656667899999999999999999999999999999998653334444444444333221 1455666667
Q ss_pred CCCcccccCcceecccccccCceecCCChhhhccCC--CChhhhhhhhhhhhcccccCCCCchhHHHHHHHHHHcCCCCC
Q 008281 110 SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 187 (571)
Q Consensus 110 ~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~~g--w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 187 (571)
.++...+++|++|||+|.+|+|.|.|+.+.+++..| |+|+++.+||+++|+.+.+.+...++...+.+++.++|+.+.
T Consensus 91 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~~ 170 (536)
T 1ju2_A 91 SEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPN 170 (536)
T ss_dssp CTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCCE
T ss_pred CCCcceeecceeccccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCCC
Confidence 777888899999999999999999999998887777 999999999999999887777777888889999999998765
Q ss_pred CCCccCCCCceeeeeEEEcCCCceecHHHhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeee
Q 008281 188 NGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLK 267 (571)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~ 267 (571)
++...+...++..+.+.++.+|.|+++..|++.+++.|++|+++++|++|+++++ +..+++||++.+.+|+.++++++
T Consensus 171 ~~~~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~--~~~~~~GV~~~~~~g~~~~~~v~ 248 (536)
T 1ju2_A 171 HGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNA--PGLTATGVIYRDSNGTPHQAFVR 248 (536)
T ss_dssp EEECCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCS--SSCBEEEEEEECTTSCEEEEEEE
T ss_pred CCcccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCC--CCCEEEEEEEEeCCCceEEEEec
Confidence 5444444555555544445789999887777777889999999999999999863 12389999998656765555322
Q ss_pred cCCCeeEEEecCCcCcHHHHHhhc--------CCCCcccccCcccCCCCCCCCCceEEecCCCcccchhhHhhcchhhhh
Q 008281 268 NGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGS 339 (571)
Q Consensus 268 ~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~~~~p~VG~nl~dh~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (571)
++|+||||||+|+||+||++|| ++||+++.++|+||+|||||+...+.+..+.+....+.....+. ..
T Consensus 249 --a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~--~~ 324 (536)
T 1ju2_A 249 --SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGIS--ND 324 (536)
T ss_dssp --EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEEC--SS
T ss_pred --cCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHH--HH
Confidence 4799999999999999999998 78999999999999999999988887776644321111000110 01
Q ss_pred HHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCCCHHHHHHHHhhhccCCCCCccceeEEEeecccccceEEEe-c
Q 008281 340 YIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL-R 418 (571)
Q Consensus 340 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~ 418 (571)
|.....|. + ......+...+... ...+. ..+..+...+++|.|||+|+| +
T Consensus 325 ~~~~~~g~-~-------------~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~l~~P~SrG~V~L~~ 375 (536)
T 1ju2_A 325 FYQCSFSS-L-------------PFTTPPFGFFPSSS-------------YPLPN--STFAHFASKVAGPLSYGSLTLKS 375 (536)
T ss_dssp EEEEEEEE-C-------------CCSSCCBTTBSSSC-------------CCCCS--SCEEEEEEEESSCSCCEEEECSC
T ss_pred HHHcCCCC-C-------------CCChhhheeecCcc-------------cCCCC--cceEEEeeecCCCCcceEEEeCC
Confidence 22111121 0 00000000000000 01111 122345667789999999999 8
Q ss_pred CCCCCCCCeeecCCCCChHHHHHHHHHHHHHHHHHhcccccccccccC-cchhhhccccCCCCCCCCCCCCChHHHHHHH
Q 008281 419 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESM-SVPILVNMTASAPVNLLPRHSNASTSLEQFC 497 (571)
Q Consensus 419 s~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 497 (571)
++||.+.|+|+++|+.+|.|++.++++++.+++++++.++..+...+. ..|.+..... ..|...+++++|++|+
T Consensus 376 s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-----~~p~~~~~d~~~~~~i 450 (536)
T 1ju2_A 376 SSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILGI-----PLPKDQTDDAAFETFC 450 (536)
T ss_dssp SSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBSSS-----CCCSCTTCHHHHHHHH
T ss_pred CCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhccccccCCCcccccc-----CCCcccCCHHHHHHHH
Confidence 999999999999999999999999999999999999998887764431 1111110000 0233346789999999
Q ss_pred HhccccccccccccccCcccCCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhcC
Q 008281 498 RDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 568 (571)
Q Consensus 498 ~~~~~~~~H~~GTc~MG~VVD~~~rV~G~~NL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~~~~ 568 (571)
|....+.+|++||||||+|||++|||||++||||||+||||+++++||++|+||||||+|++|+++.+.+.
T Consensus 451 r~~~~t~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~~ 521 (536)
T 1ju2_A 451 RESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSASD 521 (536)
T ss_dssp HHHCEECSCCEESSCBTTTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhccCccccCcCccCCccEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987654
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=4e-77 Score=641.98 Aligned_cols=479 Identities=23% Similarity=0.296 Sum_probs=347.4
Q ss_pred CCCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCCC-CCCCCcccchhhhhcc---CCCCCCCCCCcccCCCccccc
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSP-YGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVINS 117 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 117 (571)
.++|||||||||.+||++|.||+| +.+|||||+|+.. ...+.+..+..+...+ .+|.|.+.+|. ..++...++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~~~~~ 95 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQTALIR 95 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCCCEEC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCeeecc
Confidence 468999999999999999999998 7899999999843 2244455555554433 36888888775 578888999
Q ss_pred CcceecccccccCceecCCChhhhcc------C-CCChhhhhhhhhhhhcccc---------------c-----------
Q 008281 118 RARVLGGGSCLNAGFYTRAAPYYVRE------V-GWDERLVNESYQWVEKVVA---------------F----------- 164 (571)
Q Consensus 118 ~g~~lGG~s~~n~~~~~r~~~~~~~~------~-gw~~~~l~~~~~~~e~~~~---------------~----------- 164 (571)
+|++|||+|++|+|+|.|+++.+++. . +|+|+++.|||+++|.... +
T Consensus 96 rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~ 175 (583)
T 3qvp_A 96 SGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGP 175 (583)
T ss_dssp CBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBC
T ss_pred CceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecC
Confidence 99999999999999999999965432 4 8999999999999987631 0
Q ss_pred C---CCCchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeEE----EcCCCceecHHH-hhh-hcCCCCcEEEcCcEEE
Q 008281 165 E---PPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTI----FDQNGQRHTAAD-LLE-YANPSGLTLLLHASVH 235 (571)
Q Consensus 165 ~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~----~~~~g~r~~~~~-~l~-~~~~~g~~i~~~~~V~ 235 (571)
. ....+....+.++++++|++...++ ..+...|... +..+|.|+++.. ||. ..+++|++|++++.|+
T Consensus 176 ~~~~~~~~~~~~~~~~a~~~~G~~~~~D~----n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~ 251 (583)
T 3qvp_A 176 RDTGDDYSPIVKALMSAVEDRGVPTKKDF----GCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVG 251 (583)
T ss_dssp CCCSSCBCTHHHHHHHHHHTTTCCBCCCT----TSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEE
T ss_pred CCCcccCCHHHHHHHHHHHHcCCCcCCCC----CCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEE
Confidence 0 1123566788899999998643322 2233333322 234688988876 774 6678999999999999
Q ss_pred EEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc--------CCCCcccccCcccCCC
Q 008281 236 KVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQG 307 (571)
Q Consensus 236 ~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~~~~p~VG~n 307 (571)
||++++.+ .+++|+||++.+.+|+.++++ ++|+||||||+|+||+|||+|| ++|||++.|+| ||+|
T Consensus 252 rIl~d~~~-~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~N 325 (583)
T 3qvp_A 252 KVLLSQNG-TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLN 325 (583)
T ss_dssp EEEEECSS-SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCC
T ss_pred EEEeccCC-CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccc
Confidence 99998421 123999999986678877776 6789999999999999999999 89999999999 9999
Q ss_pred CCCCCCceEEecCCCccc--------chhhHhhcc--hhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCC
Q 008281 308 MSDNPMNAIFVPSPVPVE--------VSLIQVVGI--TQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQR 377 (571)
Q Consensus 308 l~dh~~~~v~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (571)
||||+.+.+.+..+.+.. .++...++. .....|+....+. +... ..+.+.+.
T Consensus 326 LqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~------- 387 (583)
T 3qvp_A 326 LQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQ-WAEE----------AVARGGFH------- 387 (583)
T ss_dssp BBCCEEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHH-HHHH----------HHHTTSCS-------
T ss_pred hhhCccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcch-hhcc----------cccccCcc-------
Confidence 999999888887653210 011111100 0000111110000 0000 00000000
Q ss_pred CHHHHHHHHhh----h--ccCCCC-----CccceeEEEeecccccceEEEecCCCCCCCCee-ecCCCCChHHHHHHHHH
Q 008281 378 TPEAIAEAIEN----M--KALDDP-----AFRGGFILEKVMGPVSTGHLELRTRNPNDNPSV-TFNYFKEPEDLQRCVQG 445 (571)
Q Consensus 378 ~~~~~~~~~~~----~--~~~~~~-----~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i-~~~~~~~~~D~~~~~~~ 445 (571)
....++..+.. . ...+.. ......+....++|.|||+|+|+|+||.+.|+| ++||+.+|.|++.++++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~ 467 (583)
T 3qvp_A 388 NTTALLIQYENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAA 467 (583)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHH
T ss_pred ccHHHHhhhccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHH
Confidence 00111111100 0 000000 001112233447999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHhcccccccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC-----cccCCC
Q 008281 446 ISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHD 520 (571)
Q Consensus 446 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG-----~VVD~~ 520 (571)
++.+++|+++.+++.+...+.. |++ .. ....++++|++|+|....+.+|++|||||| +|||++
T Consensus 468 ~~~~~~i~~~~~~~~~~~~~~~-pg~----------~~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~ 535 (583)
T 3qvp_A 468 TQLARNISNSGAMQTYFAGETI-PGD----------NL-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNA 535 (583)
T ss_dssp HHHHHHHHTSTTHHHHEEEEEE-SGG----------GS-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTT
T ss_pred HHHHHHHHhCcchhhccccccC-CCc----------cc-ccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCC
Confidence 9999999999888776643321 111 00 123679999999999999999999999999 799999
Q ss_pred CeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 008281 521 YKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 563 (571)
Q Consensus 521 ~rV~G~~NL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 563 (571)
|||||++||||||+||||+++++||++|+||||||+||+|+++
T Consensus 536 lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~ 578 (583)
T 3qvp_A 536 ARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILED 578 (583)
T ss_dssp CBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999976654
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.6e-74 Score=622.44 Aligned_cols=483 Identities=21% Similarity=0.277 Sum_probs=343.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-C-CeEEEEecCCCC-CCCCCcccchhhhhcc---CCCCCCCCCCcccCCCccc--
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSP-YGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVI-- 115 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-- 115 (571)
.++|||||||||.|||++|.||+| + .||||||+|+.. ...+.+..|..+...+ .+|.|.+. ..++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 457999999999999999999999 6 799999999863 2223333444333322 25666544 3344444
Q ss_pred ----ccCcceecccccccCceecCCChhhhc------cCCCChhhhhhhhhhhhcccccC--------------------
Q 008281 116 ----NSRARVLGGGSCLNAGFYTRAAPYYVR------EVGWDERLVNESYQWVEKVVAFE-------------------- 165 (571)
Q Consensus 116 ----~~~g~~lGG~s~~n~~~~~r~~~~~~~------~~gw~~~~l~~~~~~~e~~~~~~-------------------- 165 (571)
+++||+|||+|++|+|+|.|+++.+++ ..+|+|+++.+||++.|......
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 899999999999999999999986544 26799999999999988754211
Q ss_pred C-C---CchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeEEE---cCCCceecHHHhhhhcCCCCcEEEcCcEEEEEE
Q 008281 166 P-P---MRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQRHTAADLLEYANPSGLTLLLHASVHKVL 238 (571)
Q Consensus 166 ~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~---~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~ 238 (571)
+ . ..++...+.+++++.|++...++ ..+...|...+ ..+|.|+++..| ...++|++|++++.|+||+
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~----n~~~~~G~~~~~~~~~~g~R~s~~~~--l~~r~Nl~v~~~a~v~ri~ 233 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENI----YDGEMDGLTHCCDTIYRGQRSGSFLF--VKNKPNITIVPEVHSKRLI 233 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCC----SSSCCCEEEECEESEETTEECCGGGG--SSSCTTEEEECSEEEEEEE
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCC----CCCCcCeEEeecceecCCeEeeHHHH--HhcCCCeEEEcCcEEEEEE
Confidence 0 0 11355667888899998643222 12222332221 246888876555 3568899999999999999
Q ss_pred ecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc--------CCCCcccccCcccCCCCCC
Q 008281 239 FRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSD 310 (571)
Q Consensus 239 ~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~~~~p~VG~nl~d 310 (571)
+++.+ .+++||++.+.+|+.+++. ++|+||||||+|+||+|||+|| ++|||++.|+|+||+||||
T Consensus 234 ~~~~~---~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~D 306 (577)
T 3q9t_A 234 INEAD---RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMD 306 (577)
T ss_dssp EETTT---TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBC
T ss_pred EeCCC---CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhc
Confidence 98421 2999999987568777776 6699999999999999999999 9999999999999999999
Q ss_pred CCCceEEecCCCcccchh--hH--hhcchhhhhHHHhhcCCcccCCCCCCCCCCCccccc--c-------------cccc
Q 008281 311 NPMNAIFVPSPVPVEVSL--IQ--VVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--G-------------QLSK 371 (571)
Q Consensus 311 h~~~~v~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~-------------~~~~ 371 (571)
|+.+.+.+..+.+..... .. .........|.....|+.-. .. ....++..... . ....
T Consensus 307 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (577)
T 3q9t_A 307 HPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS-GL--LELVGFPRIDKYLEKDAEYRKAKAANGGKDP 383 (577)
T ss_dssp CEEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC-CS--EEEEEECCCHHHHTTCHHHHHHHHHTTTSCS
T ss_pred CcceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc-ch--hheeEEeecChhhhcchhhhhhhhccccccc
Confidence 999988887765432110 00 00011223455554553210 00 00000000000 0 0000
Q ss_pred CCCCCCCHHHHHHHH-----hhhc-cCCC-CCccceeEEEeecccccce-EEEecCCCCCCCCeeecCCCCChHHHHHHH
Q 008281 372 VPPKQRTPEAIAEAI-----ENMK-ALDD-PAFRGGFILEKVMGPVSTG-HLELRTRNPNDNPSVTFNYFKEPEDLQRCV 443 (571)
Q Consensus 372 ~~~~~~~~~~~~~~~-----~~~~-~~~~-~~~~~~~~~~~~~~p~s~g-~v~l~s~d~~~~p~i~~~~~~~~~D~~~~~ 443 (571)
..+. ..++ ++..+ .... ..+. ......++...+++|.||| +|+|+|+||.+.|+|++||+++|.|++.++
T Consensus 384 ~~~~-~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~ 461 (577)
T 3q9t_A 384 FSPL-GQPH-FELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMR 461 (577)
T ss_dssp SCTT-SCCS-EEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHH
T ss_pred cCCC-CCce-EEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHH
Confidence 0000 0000 00000 0000 0000 1112345667789999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHH-hcccccccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC-----ccc
Q 008281 444 QGISTIEKII-ESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVV 517 (571)
Q Consensus 444 ~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG-----~VV 517 (571)
++++.+++++ ++++++.+...+.. | +...+++++|++|+|....+.+|++|||+|| +||
T Consensus 462 ~~~~~~~~i~~~~~~~~~~~~~e~~-----------p----~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VV 526 (577)
T 3q9t_A 462 EGIRFSYDLLFKGEGFKDLVESEYP-----------W----EMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVV 526 (577)
T ss_dssp HHHHHHHHHHHHSTTGGGTEEEEES-----------S----CCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSB
T ss_pred HHHHHHHHHHHhChhhhhccccccC-----------C----CCCcCCHHHHHHHHHhccccccccccceecCCCCCCceE
Confidence 9999999999 88888877654421 1 1235789999999999999999999999999 699
Q ss_pred CCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 008281 518 DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 563 (571)
Q Consensus 518 D~~~rV~G~~NL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 563 (571)
|+++||||++||||||+||||+.+++||++|+||||||+||.|+++
T Consensus 527 D~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 527 DPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp CTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999966654
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.4e-72 Score=612.49 Aligned_cols=494 Identities=21% Similarity=0.234 Sum_probs=348.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCCCCCCCCcc-cchhhhhcc---CCCCCCCCCCcccCCCccccc
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNIT-NLGSFGAAL---SDLSSTSPSQRFISEDGVINS 117 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 117 (571)
+.+|||||||+|++|+++|.+|++ |.+|+|||+|......+... .+..+...+ .+|.|.+.+ ...++.+.++
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~ 99 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIK 99 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEEC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeee
Confidence 468999999999999999999999 89999999998764334333 333333222 246665554 4567888999
Q ss_pred CcceecccccccCceecCCChhhhc-------cCCCChhhhhhhhhhhhccccc-----------CC-------------
Q 008281 118 RARVLGGGSCLNAGFYTRAAPYYVR-------EVGWDERLVNESYQWVEKVVAF-----------EP------------- 166 (571)
Q Consensus 118 ~g~~lGG~s~~n~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~e~~~~~-----------~~------------- 166 (571)
+|++|||+|++|+|+|.|+++.+|+ ..+|+|+++.|||+++|+.+.. .+
T Consensus 100 rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~ 179 (587)
T 1gpe_A 100 AGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGA 179 (587)
T ss_dssp CBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBC
T ss_pred ccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEcc
Confidence 9999999999999999999996543 2579999999999999987642 10
Q ss_pred -----CCchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeEEEcCCCceecHHH-hhh-hcCCCCcEEEcCcEEEEEEe
Q 008281 167 -----PMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLF 239 (571)
Q Consensus 167 -----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~g~r~~~~~-~l~-~~~~~g~~i~~~~~V~~i~~ 239 (571)
...+..+.+.++++++|++...++......|+......++.+|.|+++.. |+. .+++.|++|++++.|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 180 RDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 12345778899999999875433322212222221111124688998865 774 66789999999999999999
Q ss_pred cCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc--------CCCCcccccCcccCCCCCCC
Q 008281 240 RIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDN 311 (571)
Q Consensus 240 ~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~~~~p~VG~nl~dh 311 (571)
++++ +..+++||++.+.+|+.+++. ++|+||||||+|+||+||++|| ++||+++.++| ||+||+||
T Consensus 260 ~~~~-~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH 333 (587)
T 1gpe_A 260 KQTA-SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQ 333 (587)
T ss_dssp EEET-TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCC
T ss_pred CCCC-CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcC
Confidence 7531 113999999986577777776 4599999999999999999999 89999999999 99999999
Q ss_pred CCceEEecCCCcccchhhHhhcc-hhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCC-CCCC--CHHHHHHHHh
Q 008281 312 PMNAIFVPSPVPVEVSLIQVVGI-TQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVP-PKQR--TPEAIAEAIE 387 (571)
Q Consensus 312 ~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 387 (571)
+.+.+.+.++.+... ....... .....|.....|..-... .....+.... ..... .... .++ ++..+.
T Consensus 334 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~ 405 (587)
T 1gpe_A 334 TTTTVSSRASSAGAG-QGQAVFFANFTETFGDYAPQARDLLN---TKLDQWAEET---VARGGFHNVTALKVQ-YENYRN 405 (587)
T ss_dssp EEEEEEEEECGGGCS-BCEEEEEEEHHHHHGGGHHHHHHHHH---HSHHHHHHHH---HHTTSCSCHHHHHHH-HHHHHH
T ss_pred cccceEEEeCCCccc-ccchHHHHHHHHHHHhCCCCCccccc---cceeeEeecc---ccccccccccccccc-HHHHhh
Confidence 998888766543210 0000000 001122221111100000 0000000000 00000 0000 111 111111
Q ss_pred hh-c-cCCC-----CCccceeEEEeecccccceEEEecCCCCCCCC-eeecCCCCChHHHHHHHHHHHHHHHHHhccccc
Q 008281 388 NM-K-ALDD-----PAFRGGFILEKVMGPVSTGHLELRTRNPNDNP-SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 459 (571)
Q Consensus 388 ~~-~-~~~~-----~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 459 (571)
.+ . ..+. .......+...+++|.|||+|+|+++||.+.| +|+++|+.++.|++.++++++.+++++++.++.
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~ 485 (587)
T 1gpe_A 406 WLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMK 485 (587)
T ss_dssp HHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHH
T ss_pred hccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchh
Confidence 11 0 0000 00112345566789999999999999999999 999999999999999999999999999998887
Q ss_pred ccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC-----cccCCCCeEeccCCceEeec
Q 008281 460 KFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVIDG 534 (571)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG-----~VVD~~~rV~G~~NL~V~Da 534 (571)
.+...+.. |+... ...+++++|++|+|....+.+|++|||||| +|||++|||||++||||||+
T Consensus 486 ~~~~~~~~-----------pg~~~-~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDa 553 (587)
T 1gpe_A 486 EYFAGETL-----------PGYNL-VQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDG 553 (587)
T ss_dssp HHEEEEEE-----------SGGGS-CTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECST
T ss_pred hhcccccC-----------CCccc-cCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeee
Confidence 76543321 11000 113678999999999999999999999999 59999999999999999999
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHhhh
Q 008281 535 STFYYSPGTNPQATVMMLGRYMGVRILSERL 565 (571)
Q Consensus 535 Sv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~ 565 (571)
||||+++++||++|+||||||+||+|+++..
T Consensus 554 Sv~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 554 SIPPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp TCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999998887653
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=3.1e-72 Score=607.52 Aligned_cols=463 Identities=24% Similarity=0.359 Sum_probs=339.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCCCCCCCCcccchhhhhcc---CCCCCCCCCCcccCCCcccccC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVINSR 118 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 118 (571)
..+|||||||||++|+++|.||+| +.||||||+|+... ++.+..|..+.... .+|.|.+.+|....++.+.+++
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~-~~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~r 93 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPT-DPDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWAR 93 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCC-CGGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCC-CcchhChhhHhhccCCccccCccccccCCCCCCeEeccC
Confidence 458999999999999999999998 68999999998643 24444444443322 2688888899999999999999
Q ss_pred cceecccccccCceecCCChhhhcc-------CCCChhhhhhhhhhhhcccccCC----------------CCchhHHHH
Q 008281 119 ARVLGGGSCLNAGFYTRAAPYYVRE-------VGWDERLVNESYQWVEKVVAFEP----------------PMRQWQSAV 175 (571)
Q Consensus 119 g~~lGG~s~~n~~~~~r~~~~~~~~-------~gw~~~~l~~~~~~~e~~~~~~~----------------~~~~~~~~~ 175 (571)
|++|||+|++|++.|.|+.+.+|+. .+|+|+++.|||++.|....... ...+..+.+
T Consensus 94 G~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~ 173 (526)
T 3t37_A 94 GRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAF 173 (526)
T ss_dssp BCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHH
T ss_pred ccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHH
Confidence 9999999999999999999965532 57999999999999997643211 123456778
Q ss_pred HHHHHHcCCCCCCCCccCCCCceeeeeEEEcCCCceecHHH-hh-h-hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEE
Q 008281 176 RDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LL-E-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGV 252 (571)
Q Consensus 176 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~g~r~~~~~-~l-~-~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV 252 (571)
.+++.+.|++...........++... ......|.|.+... ++ + ...++|++|++++.|++|+++++ +++||
T Consensus 174 ~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~-----~a~gv 247 (526)
T 3t37_A 174 IEAGASLGLPRLEGHNSGEMIGVTPN-SLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN-----QVRSL 247 (526)
T ss_dssp HHHHHHTTCCBCSSSCSSCCBSBCCC-CBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT-----EEEEE
T ss_pred HHHHHHcCCCcccCCCCCcccccccc-cccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC-----eEEEE
Confidence 88999999865433222211222111 11124677776654 44 3 45789999999999999999887 99999
Q ss_pred EEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc--------CCCCcccccCcccCCCCCCCCCceEEe-cCCCc
Q 008281 253 VFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFV-PSPVP 323 (571)
Q Consensus 253 ~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~~~~p~VG~nl~dh~~~~v~~-~~~~~ 323 (571)
++.+. ++..++. +|+||||||+|+||+|||+|| +.||+++.++|.||+||+||+.....+ ....+
T Consensus 248 ~~~~~-~~~~~~~-----a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~ 321 (526)
T 3t37_A 248 EVVGR-QGSAEVF-----ADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKP 321 (526)
T ss_dssp EEEET-TEEEEEE-----EEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSC
T ss_pred EEEec-CceEEEe-----ecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCC
Confidence 99864 4444543 799999999999999999998 789999999999999999998765433 22222
Q ss_pred ccchhhHhhcchhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCCCHHHHHHHHhhhccCCC-CCccceeE
Q 008281 324 VEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDD-PAFRGGFI 402 (571)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 402 (571)
....... .... ..|.. .+ .+... +......+.. ..+.. . ...+. .......+
T Consensus 322 ~~~~~~~--~~~~-~~~~~--~~-~~~~~-------~~~~~~~~~~--~~~~~--~----------~~~~~~~~~~~~~~ 374 (526)
T 3t37_A 322 VPPSRLQ--HSES-MAYMR--AD-SFTAA-------GQPEIVVGCG--VAPIV--S----------ESFPAPAAGSAYSL 374 (526)
T ss_dssp CCCCSSC--SEEE-EEEEC--SS-CSSCC-------SSCCEEEEEE--SSCCC--C----------TTSCCCCTTSEEEE
T ss_pred cchHhhc--chhh-hhhhh--cc-ccccc-------CCcceeeecc--ccccc--c----------cccccccCCcceee
Confidence 2111000 0000 00100 00 00000 0000000000 00000 0 00000 11123355
Q ss_pred EEeecccccceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHHHHHHHHhcccccccccccCcchhhhccccCCCCCC
Q 008281 403 LEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNL 482 (571)
Q Consensus 403 ~~~~~~p~s~g~v~l~s~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (571)
...+.+|.|+|+|+++++|+.+.|+|+++|+.++.|++.++++++.+++++.+..+..+...+ .
T Consensus 375 ~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~----------------~ 438 (526)
T 3t37_A 375 LFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE----------------L 438 (526)
T ss_dssp EEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE----------------C
T ss_pred eccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc----------------c
Confidence 667889999999999999999999999999999999999999999999999988887766544 2
Q ss_pred CCCCCCChHHHHHHHHhccccccccccccccC----cccCCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHH
Q 008281 483 LPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGV 558 (571)
Q Consensus 483 ~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG----~VVD~~~rV~G~~NL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~ 558 (571)
.|....+++++++|+|....+.+|++|||||| +|||++|||||++||||||+||||+++++||++||||||||+||
T Consensus 439 ~pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd 518 (526)
T 3t37_A 439 LPGTPNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFAR 518 (526)
T ss_dssp SSCCCCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHH
Confidence 34445788999999999999999999999999 69999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 008281 559 RILS 562 (571)
Q Consensus 559 ~i~~ 562 (571)
+...
T Consensus 519 ~~~~ 522 (526)
T 3t37_A 519 QYHH 522 (526)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 8653
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.9e-69 Score=583.97 Aligned_cols=469 Identities=28% Similarity=0.406 Sum_probs=338.5
Q ss_pred CCCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCCCCCCCCcccchhhhhcc---CCCCCCCCCCcccCCCcccccC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVINSR 118 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 118 (571)
..+|||||||+|++|+++|.+|++ |.+|+|||+|......+....+..+...+ .+|.|.+.++.. .++.+.+.+
T Consensus 11 ~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~r 89 (546)
T 2jbv_A 11 DREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHAR 89 (546)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECC
T ss_pred cCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeec
Confidence 357999999999999999999999 68999999998653212222233332222 256666667766 677888999
Q ss_pred cceecccccccCceecCCChhhhc-------cCCCChhhhhhhhhhhhccccc------C-----------CCCchhHHH
Q 008281 119 ARVLGGGSCLNAGFYTRAAPYYVR-------EVGWDERLVNESYQWVEKVVAF------E-----------PPMRQWQSA 174 (571)
Q Consensus 119 g~~lGG~s~~n~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~e~~~~~------~-----------~~~~~~~~~ 174 (571)
|++|||+|.+|++.|.|+.+.+|+ ..+|+|+++.|||+++|+.+.. . +...+..+.
T Consensus 90 Gk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~ 169 (546)
T 2jbv_A 90 AKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVA 169 (546)
T ss_dssp BCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHH
T ss_pred ccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHH
Confidence 999999999999999999985432 2579999999999999986541 0 122455678
Q ss_pred HHHHHHHcCCCCCCCCccCC--CCceeeeeEEEcC-CCceecHHH-hhhhc-CCCCcEEEcCcEEEEEEecCCCCCCCeE
Q 008281 175 VRDGLVEVGVLPYNGFTYDH--MYGTKIGGTIFDQ-NGQRHTAAD-LLEYA-NPSGLTLLLHASVHKVLFRIKGKARPVA 249 (571)
Q Consensus 175 ~~~~~~~~g~~~~~~~~~~~--~~~~~~g~~~~~~-~g~r~~~~~-~l~~~-~~~g~~i~~~~~V~~i~~~~~~~~~~~~ 249 (571)
+.++++++|++.. .+.... ..++...... .. +|.|+++.. |+..+ ++.|++|++++.|++|++++++ ++
T Consensus 170 ~~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~-~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----~~ 243 (546)
T 2jbv_A 170 LLDACEQAGIPRA-KFNTGTTVVNGANFFQIN-RRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----RC 243 (546)
T ss_dssp HHHHHHHTTCCBC-CSSSSSCCSSEEEECEEC-BCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS----BE
T ss_pred HHHHHHHCCCCcc-CCCCCCcCcceEEeeeee-cCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC----eE
Confidence 8899999998754 322111 2222221111 23 788887765 77644 5789999999999999998732 99
Q ss_pred EEEEEEeCC-CceeEEeeecCCCeeEEEecCCcCcHHHHHhhc--------CCCCcccccCcccCCCCCCCCCceEEecC
Q 008281 250 HGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPS 320 (571)
Q Consensus 250 ~gV~~~~~~-g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~~~~p~VG~nl~dh~~~~v~~~~ 320 (571)
+||++.+.. |+.+++. +.|+||||||+++||+||++|| ++||+++.++|+||+||+||+.+.+.+.+
T Consensus 244 ~GV~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~ 319 (546)
T 2jbv_A 244 TGVDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEA 319 (546)
T ss_dssp EEEEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEE
T ss_pred EEEEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEe
Confidence 999998532 7666665 4469999999999999999999 78999999999999999999998887766
Q ss_pred CCcccchhhHhhcchhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCCCHHHHHHHHhhhccCCCCCccce
Q 008281 321 PVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGG 400 (571)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (571)
+.+..... ........|.....+. ..+ ...+ ........ ..... .. .. ......
T Consensus 320 ~~~~~~~~---~~~~~~~~f~~~~~~~------~~p-~~~~-----~~~~~~~~-~~~~~--------~g-~~-~~~~~~ 373 (546)
T 2jbv_A 320 KQPMVAES---TQWWEIGIFTPTEDGL------DRP-DLMM-----HYGSVPFD-MNTLR--------HG-YP-TTENGF 373 (546)
T ss_dssp SSCCCSCC---SSSCCEEEEECSSTTC------SSC-SEEE-----EEESSCCC-TTTGG--------GT-CC-CCSSEE
T ss_pred cCCCcccc---cchhheEEEEecCCCC------CCC-ceEE-----Eecccccc-ccccc--------cC-cc-CCCCeE
Confidence 54321000 0000000111000000 000 0000 00000000 00000 00 00 011233
Q ss_pred eEEEeecccccceEEEecCCCCCCCCeeecCCCCChH--HHHHHHHHHHHHHHHHhcccccccccccCcchhhhccccCC
Q 008281 401 FILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPE--DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 478 (571)
Q Consensus 401 ~~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~~~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (571)
.+...+++|.|||+|+|+++||++.|+|+++|+.++. |++.++++++.+++++++.++..+...+..
T Consensus 374 ~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 442 (546)
T 2jbv_A 374 SLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRELS----------- 442 (546)
T ss_dssp EEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEEE-----------
T ss_pred EEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccccc-----------
Confidence 4556778999999999999999999999999999999 999999999999999999888776543321
Q ss_pred CCCCCCCCCCChHHHHHHHHhccccccccccccccC------cccCCCCeEeccCCceEeeccCCCCCCCCchHHHHHHH
Q 008281 479 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML 552 (571)
Q Consensus 479 ~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG------~VVD~~~rV~G~~NL~V~DaSv~P~~~~~NP~lTi~Al 552 (571)
| .+ ..+++++|++|+|....+.+|++|||||| +|||++|||||++||||||+||||+++++||++|+|||
T Consensus 443 p---~~-~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~ai 518 (546)
T 2jbv_A 443 P---GV-EAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMI 518 (546)
T ss_dssp S---CT-TCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHH
T ss_pred C---CC-CCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHH
Confidence 1 11 34688999999999999999999999999 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 008281 553 GRYMGVRILSER 564 (571)
Q Consensus 553 a~r~a~~i~~~~ 564 (571)
|||+||+|+++.
T Consensus 519 AeraAd~I~~~~ 530 (546)
T 2jbv_A 519 GERCADLIRSAR 530 (546)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHHHHhhc
Confidence 999999777653
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=8.1e-61 Score=519.09 Aligned_cols=468 Identities=22% Similarity=0.245 Sum_probs=305.7
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCCCC---------------cccchhhhhccCCCCCCCCCCc
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPN---------------ITNLGSFGAALSDLSSTSPSQR 107 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 107 (571)
+.+|||||||||++|+++|.+|++ |.+|||||+|........ ...+..+...+.. ...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~ 78 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTD------SNP 78 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTC------SCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcC------CCc
Confidence 468999999999999999999999 999999999975421000 0000000001100 000
Q ss_pred ccCCCcccccCcceecccccccCceecCCChhhhcc-----CCCChhhhhhhhhhhhcccccC--C------CCchhHHH
Q 008281 108 FISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE-----VGWDERLVNESYQWVEKVVAFE--P------PMRQWQSA 174 (571)
Q Consensus 108 ~~~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~-----~gw~~~~l~~~~~~~e~~~~~~--~------~~~~~~~~ 174 (571)
........+.+|+++||+|.+|++.+.|+.+.+|+. .+|.|++ +||+++|...... + ...+....
T Consensus 79 ~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~ 156 (546)
T 1kdg_A 79 FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNV 156 (546)
T ss_dssp TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHH
T ss_pred cccccccccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHH
Confidence 011123456799999999999999999999866553 2466666 9999988754211 1 12234566
Q ss_pred HHHHHHHcCCCCCCCC-cc-CCCCceeeeeEEEcCCCceecHHH-hhh-hcCCCCcEEEcCcEEEEEEecCCCCCCCeEE
Q 008281 175 VRDGLVEVGVLPYNGF-TY-DHMYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAH 250 (571)
Q Consensus 175 ~~~~~~~~g~~~~~~~-~~-~~~~~~~~g~~~~~~~g~r~~~~~-~l~-~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~ 250 (571)
+.++++++|++..... .. ....++...... ..+|.|+++.. |+. ..++.|++|++++.|++|+++++ +++
T Consensus 157 ~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~-~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-----~~~ 230 (546)
T 1kdg_A 157 VSQLLKGQGYNQATINDNPNYKDHVFGYSAFD-FLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-----QIL 230 (546)
T ss_dssp HHHHHHTTTCEECCGGGSTTCCTTEEEECCBC-EETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT-----EEE
T ss_pred HHHHHHHCCCCcCCccCCcCCCCcEEeeeeec-cCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC-----EEE
Confidence 7888888887532100 00 011121111111 24788888754 776 44568999999999999999865 999
Q ss_pred EEEEEeC-CCcee--EEeeecCCCeeEEEecCCcCcHHHHHhhc--------CC------CCccc-----ccCcccCCCC
Q 008281 251 GVVFRDA-TGAKH--RAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AH------NITVV-----LDQPLVGQGM 308 (571)
Q Consensus 251 gV~~~~~-~g~~~--~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~------gi~~~-----~~~p~VG~nl 308 (571)
||++.+. +|+.+ ++. ++|+||||||+++||+||++|| ++ ||+++ .++| ||+||
T Consensus 231 gV~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL 305 (546)
T 1kdg_A 231 GVQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNA 305 (546)
T ss_dssp EEEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTB
T ss_pred EEEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCc
Confidence 9999753 46532 343 5899999999999999999999 22 58764 7899 99999
Q ss_pred CCCCCceEEecCCCc-ccchhhHhh---cchhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCCCHHHHHH
Q 008281 309 SDNPMNAIFVPSPVP-VEVSLIQVV---GITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAE 384 (571)
Q Consensus 309 ~dh~~~~v~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (571)
+||+.+.+.+..+.. ........+ .......|.....|.... . ....+++...... .. .... ++.
T Consensus 306 ~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~---~~~~~~~~~~~~~-----~~-~~~~-~~~ 374 (546)
T 1kdg_A 306 QDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAG-A---SPKLNFWRAYSGS-----DG-FTRY-AQG 374 (546)
T ss_dssp BCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGS-C---SCCEEEEEEEECT-----TS-CEEE-EEE
T ss_pred ccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCccccc-C---CcceEEEEccCCC-----Cc-chhh-hhh
Confidence 999998887763221 000110000 001122344433443110 0 0000111100000 00 0000 000
Q ss_pred HHhh----hc-cCCCCCccceeEEEeeccc-ccceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHHHHHHHHhcccc
Q 008281 385 AIEN----MK-ALDDPAFRGGFILEKVMGP-VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSF 458 (571)
Q Consensus 385 ~~~~----~~-~~~~~~~~~~~~~~~~~~p-~s~g~v~l~s~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 458 (571)
.+.+ .. ..+........+...+.+| .|||+|+|+|+| ..|.|+++|+.+|.|++.+.++++.+++++++.+.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~ 452 (546)
T 1kdg_A 375 TVRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPG 452 (546)
T ss_dssp EEEESCSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTT
T ss_pred eecccccccccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCc
Confidence 0000 00 0000111233444566777 999999999877 56778999999999999999999999999987642
Q ss_pred cccccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccC-----cccCCCCeEeccCCceEee
Q 008281 459 SKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVID 533 (571)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG-----~VVD~~~rV~G~~NL~V~D 533 (571)
..+. .|....+++++.+|++....+.+|++|||||| +|||++|||||++||||||
T Consensus 453 ~~~~--------------------~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvD 512 (546)
T 1kdg_A 453 LTMI--------------------TPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVD 512 (546)
T ss_dssp CEEE--------------------ESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECS
T ss_pred cccc--------------------CCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeE
Confidence 2211 12123568889999988888999999999999 6999999999999999999
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 008281 534 GSTFYYSPGTNPQATVMMLGRYMGVRILSE 563 (571)
Q Consensus 534 aSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 563 (571)
+||||+++++||++|+||||||+||+|+++
T Consensus 513 aSv~P~~~~~np~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 513 AGIIPHLPTGNPQGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp GGGCSSCCSSCSHHHHHHHHHHHHHHHHHS
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999977765
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=8.8e-60 Score=504.81 Aligned_cols=440 Identities=18% Similarity=0.209 Sum_probs=296.7
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC-CCCcccchhhh--hccCCCCCCCCCC--------------
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG-NPNITNLGSFG--AALSDLSSTSPSQ-------------- 106 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~-------------- 106 (571)
.+||+||||+|++|+++|.+|++ |.+|+|||+|..... .+....+.... ....+|.+.+.++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~ 83 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 83 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCcccccccccccccccccccccccccc
Confidence 57999999999999999999999 999999999986442 22222222111 1112455554443
Q ss_pred --ccc------CCCcccccCcceecccccccCceecCCChhhhcc--CCCChhhhh-hhhhhhhcccccCCCC-------
Q 008281 107 --RFI------SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE--VGWDERLVN-ESYQWVEKVVAFEPPM------- 168 (571)
Q Consensus 107 --~~~------~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~e~~~~~~~~~------- 168 (571)
... .++.+.+++|++|||+|++|+|.|.|+++.+|+. .+|.|++++ |||+++|+.+...+..
T Consensus 84 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~ 163 (504)
T 1n4w_A 84 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 163 (504)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred ccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccCC
Confidence 222 4567788999999999999999999999976653 679999999 9999999987654422
Q ss_pred --chhHHHHHHHHHHcCCCC----CC-CCc------cCCCCceee-eeEE-EcCCCceecHHH-hhh-hcCCCCcEEEcC
Q 008281 169 --RQWQSAVRDGLVEVGVLP----YN-GFT------YDHMYGTKI-GGTI-FDQNGQRHTAAD-LLE-YANPSGLTLLLH 231 (571)
Q Consensus 169 --~~~~~~~~~~~~~~g~~~----~~-~~~------~~~~~~~~~-g~~~-~~~~g~r~~~~~-~l~-~~~~~g~~i~~~ 231 (571)
.+..+.+.++++++|+++ .+ .+. ......|.. |.+. .+.+| |+++.. |++ +.++.|++|+++
T Consensus 164 ~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~ 242 (504)
T 1n4w_A 164 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTL 242 (504)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEES
T ss_pred CcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeC
Confidence 234567888999999842 11 110 000111111 0000 12567 887654 776 445668999999
Q ss_pred cEEEEEEecCCCCCCCeEEEEEEEeCCC---ceeEEeeecCCCeeEEEecCCcCcHHHHHhhc-CCCCcccccCcccCCC
Q 008281 232 ASVHKVLFRIKGKARPVAHGVVFRDATG---AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQG 307 (571)
Q Consensus 232 ~~V~~i~~~~~~~~~~~~~gV~~~~~~g---~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg-~~gi~~~~~~p~VG~n 307 (571)
++|++|++++++ .+++||++.+.+| +..++. +++||||||+|+||+||++|| ..+||+. ++.||+|
T Consensus 243 ~~V~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig~i~~~--~~~VG~n 312 (504)
T 1n4w_A 243 HQVKTIRQTKDG---GYALTVEQKDTDGKLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTGTLPNL--NSEVGAG 312 (504)
T ss_dssp EEEEEEEECTTS---SEEEEEEEECTTCCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSSTTC--CTTTTCC
T ss_pred CEEEEEEECCCC---CEEEEEEEeCCCCccceeEEEe-----eCEEEEccCCCCCHHHHHhccccCCCCCC--Chhhccc
Confidence 999999998531 3899999986566 344554 679999999999999999999 7778855 4589999
Q ss_pred CCCCCCceEEecCCCcccchhhHhhcchhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCCCHHHHHHHHh
Q 008281 308 MSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIE 387 (571)
Q Consensus 308 l~dh~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (571)
|+||+.+.+.+.... ... .+ .+. .+.. ..++... . .+. .+..+ .
T Consensus 313 l~dh~~~~~~~~~~~-~~~-----~~-----~~~---~~~~---------~~~~~~~-----~--~~~--~~~~~----~ 356 (504)
T 1n4w_A 313 WGPNGNIMTARANHM-WNP-----TG-----AHQ---SSIP---------ALGIDAW-----D--NSD--SSVFA----E 356 (504)
T ss_dssp BBCTTCEEEEEECCT-TCC-----CC-----SCC---CSSC---------CEEEEEC-----C--SST--TCEEE----E
T ss_pred cccCCcceeeeccCC-CCc-----cc-----CcC---CCcc---------EEEEecc-----C--CCC--CceEE----E
Confidence 999998765543211 000 00 000 0000 0000000 0 000 00000 0
Q ss_pred hhccCCCCCccceeEEEeecccccceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHH-HHHHHHhcccccccccccC
Q 008281 388 NMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESM 466 (571)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~ 466 (571)
.. ..+........++..+.+|.|+|+|+|+++|+ .|+++|+.++ | +.+.++++ .+++|+++.+. + ...
T Consensus 357 ~~-~~~~~~~~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~-~~~- 425 (504)
T 1n4w_A 357 IA-PMPAGLETWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--I-YRY- 425 (504)
T ss_dssp EE-CCCCSSCCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C-BCC-
T ss_pred ec-cCChHHHhhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--C-cCC-
Confidence 00 00000001234455667899999999998764 7999999999 8 77888888 89999987653 1 000
Q ss_pred cchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccCcccCCCCeEeccCCceEeeccCCCCCCCCchH
Q 008281 467 SVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQ 546 (571)
Q Consensus 467 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG~VVD~~~rV~G~~NL~V~DaSv~P~~~~~NP~ 546 (571)
+. ...+ ++++ ...+.+|++||||||+|||+++||||++||||||+||||+++++||+
T Consensus 426 -----------------~~--~~~~-~~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~ 482 (504)
T 1n4w_A 426 -----------------DL--FGTQ-LKAF---ADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPF 482 (504)
T ss_dssp -----------------SS--SSSS-CCSE---ECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSH
T ss_pred -----------------ch--hhhh-hhhh---ccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChH
Confidence 00 0000 0000 34688999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 008281 547 ATVMMLGRYMGVRILSERL 565 (571)
Q Consensus 547 lTi~Ala~r~a~~i~~~~~ 565 (571)
+|+||||||+||+|+++..
T Consensus 483 ~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 483 VTITALAERNVERIIKQDV 501 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999998887654
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=3.7e-59 Score=500.00 Aligned_cols=441 Identities=17% Similarity=0.170 Sum_probs=293.8
Q ss_pred CCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCCCCcccchhhhhc-----cCCCCCCCCCC---------
Q 008281 42 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNITNLGSFGAA-----LSDLSSTSPSQ--------- 106 (571)
Q Consensus 42 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------- 106 (571)
.+..+||+||||+|++|+++|.+|++ |.+|+|||+|..... .......|... ..+|.+.+.+|
T Consensus 7 ~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~ 84 (507)
T 1coy_A 7 ADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 84 (507)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred CcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccc
Confidence 34568999999999999999999999 999999999975421 01000011111 12455555544
Q ss_pred ------ccc------CCCcccccCcceecccccccCceecCCChhhhcc--CCCChhhhh-hhhhhhhcccccCCCC---
Q 008281 107 ------RFI------SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE--VGWDERLVN-ESYQWVEKVVAFEPPM--- 168 (571)
Q Consensus 107 ------~~~------~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~e~~~~~~~~~--- 168 (571)
... .++.+.+++|++|||+|++|+|+|.|+.+.+|+. .+|.|++++ |||+++|+.+...+..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~ 164 (507)
T 1coy_A 85 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAW 164 (507)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHH
T ss_pred cccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCCcc
Confidence 333 5567788999999999999999999999976653 578999999 9999999987665432
Q ss_pred ------chhHHHHHHHHHHcCCCC----CC-CCc------cCCCCceee-eeEE-EcCCCceecHHH-hhh-hcCCCCcE
Q 008281 169 ------RQWQSAVRDGLVEVGVLP----YN-GFT------YDHMYGTKI-GGTI-FDQNGQRHTAAD-LLE-YANPSGLT 227 (571)
Q Consensus 169 ------~~~~~~~~~~~~~~g~~~----~~-~~~------~~~~~~~~~-g~~~-~~~~g~r~~~~~-~l~-~~~~~g~~ 227 (571)
.+..+.+.++++++|+++ .+ .+. ......|.. |.|. -+.+| |+++.. |+. +.++.|++
T Consensus 165 ~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n~~ 243 (507)
T 1coy_A 165 FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGKLT 243 (507)
T ss_dssp HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTCEE
T ss_pred ccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhcCCcE
Confidence 234567888999999842 11 110 000011110 0000 02567 887654 776 44567899
Q ss_pred EEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCc---eeEEeeecCCCeeEEEecCCcCcHHHHHhhc-CCCCcccccCcc
Q 008281 228 LLLHASVHKVLFRIKGKARPVAHGVVFRDATGA---KHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPL 303 (571)
Q Consensus 228 i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~---~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg-~~gi~~~~~~p~ 303 (571)
|+++++|++|++++++ .+++||++.+.+|. .+++. +++||||||+|+||+||++|| .-++| +.++.
T Consensus 244 i~~~~~v~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~lp--nl~d~ 313 (507)
T 1coy_A 244 ITTLHRVTKVAPATGS---GYSVTMEQIDEQGNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGHLP--NLSSQ 313 (507)
T ss_dssp EECSEEEEEEEECSSS---SEEEEEEEECTTSCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSST--TSCTT
T ss_pred EEeCCEEEEEEECCCC---CEEEEEEEeCCCCcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCCCC--ccChh
Confidence 9999999999998631 28999999864563 44554 679999999999999999999 54455 44668
Q ss_pred cCCCCCCCCCceEEec-CCCcccchhhHhhcchhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCCCHHHH
Q 008281 304 VGQGMSDNPMNAIFVP-SPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAI 382 (571)
Q Consensus 304 VG~nl~dh~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (571)
||+||+||+...+... ..... .+ .+ .+... ...+..+.. +. .+..+
T Consensus 314 VG~~l~~h~~~~~~~~~~~~~~-------~~-----~~----~~~~~------~~~~~~~~~---------~~--~~~~~ 360 (507)
T 1coy_A 314 VGEGWGNNGNIMVGRANHMWDA-------TG-----SK----QATIP------TMGIDNWAD---------PT--APIFA 360 (507)
T ss_dssp TTCCBBCTTEEEEEEECCTTSC-------CC-----SC----CCSSC------CEEEECTTC---------TT--SCEEE
T ss_pred hCCccccCCccccccccccccc-------cc-----cc----CCCcc------eEEEeccCC---------CC--CCcEE
Confidence 9999999997443211 10000 00 00 00000 000000000 00 00000
Q ss_pred HHHHhhhccCCCCCccceeEEEeecccccceEEEecCCCCCCCCeeecCCCCChHHHHHHHHHHH-HHHHHHhccccccc
Q 008281 383 AEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKF 461 (571)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~ 461 (571)
... ..+........++..+.+|.|+|+|+|+++|+ .|+++|+.++ | +.+.++++ .+++++++.+. +
T Consensus 361 ----~~~-~~~~~~~~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~ 427 (507)
T 1coy_A 361 ----EIA-PLPAGLETYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--I 427 (507)
T ss_dssp ----EEE-CCCCSSCCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C
T ss_pred ----Eec-cCCHHHhhheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--c
Confidence 000 00000001223444567899999999998654 8999999999 8 45677776 89999988652 1
Q ss_pred ccccCcchhhhccccCCCCCCCCCCCCChHHHHHHHHhccccccccccccccCcccCCCCeEeccCCceEeeccCCCCCC
Q 008281 462 KYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSP 541 (571)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTc~MG~VVD~~~rV~G~~NL~V~DaSv~P~~~ 541 (571)
...+ . ..+++ ++| ...+.+|++||||||+|||++|||||++||||||+||||+++
T Consensus 428 ~~~~-------------------~-~~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~ 482 (507)
T 1coy_A 428 YRTD-------------------L-FGVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNV 482 (507)
T ss_dssp BCSS-------------------C-C--CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGGSCSCC
T ss_pred ccCc-------------------c-cccch--hhh---cccccccccCCcchhheECCCCeEeccCCeEEeechhccCCC
Confidence 1110 0 01111 122 356889999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhhh
Q 008281 542 GTNPQATVMMLGRYMGVRILSERLA 566 (571)
Q Consensus 542 ~~NP~lTi~Ala~r~a~~i~~~~~~ 566 (571)
++||++||||||||+||+|+++++|
T Consensus 483 ~~Np~~ti~alAeraAd~I~~~~~~ 507 (507)
T 1coy_A 483 GVNPFVTITALAERNMDKIISSDIQ 507 (507)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHTC-
T ss_pred CcChHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=3.6e-46 Score=407.06 Aligned_cols=459 Identities=16% Similarity=0.127 Sum_probs=276.7
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCCCCccc----c------hhhhhc-----cC-C--CC---
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNITN----L------GSFGAA-----LS-D--LS--- 100 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~~~~----~------~~~~~~-----~~-~--~~--- 100 (571)
|..+|||||||+|++|+.+|..|++ |.+|+|||++........... . ..+... .. + ..
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~ 122 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 122 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccccc
Confidence 3468999999999999999999999 999999999986542110000 0 000000 00 0 00
Q ss_pred -------CCCCCCcccCC------Cccc----ccCcceecccccccCceecCCChhh--hccCCC---Chhhhhhhhhhh
Q 008281 101 -------STSPSQRFISE------DGVI----NSRARVLGGGSCLNAGFYTRAAPYY--VREVGW---DERLVNESYQWV 158 (571)
Q Consensus 101 -------~~~~~~~~~~~------~~~~----~~~g~~lGG~s~~n~~~~~r~~~~~--~~~~gw---~~~~l~~~~~~~ 158 (571)
........... ..+. ...+..+||.+.+|.+...|..+.. .....| .++++.++|+..
T Consensus 123 ~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~~ 202 (623)
T 3pl8_A 123 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 202 (623)
T ss_dssp CCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHHH
Confidence 00000000000 0011 1246778999999999888877631 001223 246778888877
Q ss_pred hcccccCCCC--chhH-HHHHHHHHHcCCCCCCCCccCCCCceeeeeEEEcCCCceecHHH-hhh-h------cCCCCcE
Q 008281 159 EKVVAFEPPM--RQWQ-SAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LLE-Y------ANPSGLT 227 (571)
Q Consensus 159 e~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~g~r~~~~~-~l~-~------~~~~g~~ 227 (571)
+..+...... .... ......+....... ..+ ...............|+++.. ++. . .+++|++
T Consensus 203 ~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~-~~~-----~~~p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~ 276 (623)
T 3pl8_A 203 ESYFQTGTDQFKESIRHNLVLNKLTEEYKGQ-RDF-----QQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFN 276 (623)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTT-SCC-----EECCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEE
T ss_pred HHhcccccccccCccccccchHHHHHhhhhc-ccc-----cccchhhccCCCCccccchHHhhhhhhhcchhhccCCCEE
Confidence 7665433221 1111 11111222211100 000 000111111122334555443 554 3 3456999
Q ss_pred EEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc--------CCCCccc
Q 008281 228 LLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVV 298 (571)
Q Consensus 228 i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg--------~~gi~~~ 298 (571)
|++++.|++|++++++ .+++||++.+ .+|+.+++. +++||||+|++.+|+||++|| .+||++
T Consensus 277 v~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i~-----A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~- 347 (623)
T 3pl8_A 277 LFPAVACERVVRNALN---SEIESLHIHDLISGDRFEIK-----ADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE- 347 (623)
T ss_dssp EECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEEC-----EEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS-
T ss_pred EEeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEEE-----CCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC-
Confidence 9999999999997532 3899999987 467666664 789999999999999999998 678877
Q ss_pred ccCcccCCCCCCCCCceEEecCCCcccchhhHhhcchhhhhHHHhhcCCcccCCCCCCCCCCCccccccccccCCCCCCC
Q 008281 299 LDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRT 378 (571)
Q Consensus 299 ~~~p~VG~nl~dh~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (571)
++|.||+||+||+...+.+.++.+....+.+ +|. ..| |..+..+.. ..+.. .+.....
T Consensus 348 -~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~--------~~~--~~g--~~g~~~~~~--~~~~~-------~p~~~~~ 405 (623)
T 3pl8_A 348 -LLPSLGSYITEQSLVFCQTVMSTELIDSVKS--------DMT--IRG--TPGELTYSV--TYTPG-------ASTNKHP 405 (623)
T ss_dssp -SCTTTTBSCBCCCEEEEEEEECHHHHHHHTT--------TCE--EES--CTTSTTCEE--ECCTT-------CTTCSSC
T ss_pred -CCcccccchhhCcCceEEEEECCcccccccc--------ccc--ccc--cCCCcceec--ccccC-------cccccCC
Confidence 9999999999999999888776542111110 010 001 100000000 00000 0000001
Q ss_pred HHHH---HHHHhhh---------ccC------C---------------------CCC----ccceeEEEeecccccceEE
Q 008281 379 PEAI---AEAIENM---------KAL------D---------------------DPA----FRGGFILEKVMGPVSTGHL 415 (571)
Q Consensus 379 ~~~~---~~~~~~~---------~~~------~---------------------~~~----~~~~~~~~~~~~p~s~g~v 415 (571)
+.+- ...+... .++ + ++. ............|.++|+|
T Consensus 406 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~n~v 485 (623)
T 3pl8_A 406 DWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKL 485 (623)
T ss_dssp HHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTTCEE
T ss_pred chhhhhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCCCEE
Confidence 1100 0000000 000 0 000 0000112233568899999
Q ss_pred EecC--CCCCCCCeeecCCCCChH-HHHHHHHHHHHHHHHHhcccccccccccCcchhhhccccCCCCCCCCCCCCChHH
Q 008281 416 ELRT--RNPNDNPSVTFNYFKEPE-DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTS 492 (571)
Q Consensus 416 ~l~s--~d~~~~p~i~~~~~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 492 (571)
+|++ +|+++.|+++++|..++. |++++.++++.+.++++.++....... +.
T Consensus 486 ~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~-------------------~~------- 539 (623)
T 3pl8_A 486 WFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL-------------------PQ------- 539 (623)
T ss_dssp EEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC-------------------SE-------
T ss_pred EECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch-------------------hh-------
Confidence 9986 899999999999999999 999999999999999988654321100 00
Q ss_pred HHHHHHhccccccccccccccC------ccc-CCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHHHHhhh
Q 008281 493 LEQFCRDTVMTIWHYHGGCQVG------KVV-DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 565 (571)
Q Consensus 493 ~~~~~~~~~~~~~H~~GTc~MG------~VV-D~~~rV~G~~NL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~ 565 (571)
+ ....+++|++|||||| +|| |+++||||++||||+|+|+||+++++||++|+||||+|+|++|+++..
T Consensus 540 ~-----~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~ 614 (623)
T 3pl8_A 540 F-----MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFT 614 (623)
T ss_dssp E-----CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred c-----cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhh
Confidence 0 0135789999999999 586 999999999999999999999999999999999999999999988766
Q ss_pred hcCC
Q 008281 566 ASND 569 (571)
Q Consensus 566 ~~~~ 569 (571)
..|+
T Consensus 615 ~~~~ 618 (623)
T 3pl8_A 615 PSPF 618 (623)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 5554
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.50 E-value=1.2e-13 Score=147.72 Aligned_cols=63 Identities=16% Similarity=0.294 Sum_probs=48.6
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCC-eeEEEecCCcC-cHHHHHh
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPK-NEIIVSAGALG-SPQLLML 289 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~-~~VVLaAGai~-tp~LLl~ 289 (571)
++..+++.|++|+++++|++|+.++++ +++||++.+ +++..++. + |.||||+|++. ++.+|..
T Consensus 208 L~~~~~~~Gv~i~~~t~v~~L~~~~~g----~v~GV~~~~-~g~~~~i~-----A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 208 LVETAEKLGVRAEYDMRVQTLVTDDTG----RVVGIVAKQ-YGKEVAVR-----ARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTTC----CEEEEEEEE-TTEEEEEE-----EEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHcCCEEEecCEeEEEEECCCC----cEEEEEEEE-CCcEEEEE-----eCCeEEEeCCChhhCHHHHHH
Confidence 445556679999999999999998443 999999985 55555665 5 69999999998 5555543
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.37 E-value=3.5e-12 Score=138.13 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=48.3
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
++..+++.|++|+++++|++|+.++++ +++||.+.+.+|+..++. ++.||||+|++...+-|
T Consensus 256 L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----A~~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 256 LRKAAKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMIG-----AKSVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEEE-----EEEEEECCCCCTTCHHH
T ss_pred HHHHHHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEEE-----cCEEEEecCCcccCHHH
Confidence 344556679999999999999988722 999999986667655554 69999999999875433
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.36 E-value=6e-12 Score=136.48 Aligned_cols=60 Identities=17% Similarity=0.254 Sum_probs=46.9
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHH
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 285 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~ 285 (571)
++..+++.|++|+++++|++|+.++++ +++||.+.+.+|+..++. ++.||||+|++...+
T Consensus 261 L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 261 LYDNAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWVK-----ADAVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCH
T ss_pred HHHHHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEEE-----CCeEEEeCCCcccCH
Confidence 344556679999999999999987632 899999986567655554 688999999987643
No 15
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.24 E-value=5.2e-11 Score=130.16 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=45.1
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCc
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 283 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~t 283 (571)
++..+.+.|++|++++.|++|+.+++ +++||.+.+ .+|+...+. ++.||||+|++..
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 33445567999999999999998765 999999875 467665554 7899999999864
No 16
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.22 E-value=9.2e-11 Score=126.98 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=47.8
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCc-HHHHH
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS-PQLLM 288 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~t-p~LLl 288 (571)
++..+++.|++|+++++|++|+.++++ +++||.+.+.+|+..++. ++.||||+|++.. +.++.
T Consensus 261 L~~~~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i~-----A~~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 261 LWDNAVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVIK-----ADAVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEEE-----cCEEEEeCCCCccCHHHHH
Confidence 344556679999999999999987622 899999986567655664 6999999999874 45554
No 17
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.20 E-value=2.8e-11 Score=123.46 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=44.1
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhh
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 290 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~S 290 (571)
+...+++.|++|+++++|++|..+++ .+..|.+ .+|+..++. ++.||+|+|+. +++|+...
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~~~~v~~--~~g~~~~~~-----a~~VV~A~G~~-s~~l~~~~ 216 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE-----GGFELDF--GGAEPMTLS-----CRVLINAAGLH-APGLARRI 216 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-----SSEEEEE--CTTSCEEEE-----EEEEEECCGGG-HHHHHHTE
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-----ceEEEEE--CCCceeEEE-----eCEEEECCCcc-hHHHHHHh
Confidence 34456677999999999999998765 3233544 356544554 78999999974 88887655
No 18
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.20 E-value=1.6e-10 Score=125.53 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=46.4
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCc
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 283 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~t 283 (571)
++..+.+.|++|++++.|++|+.+++ +++||.+.+ .+|+...+. ++.||||+|++..
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 44456678999999999999998765 999999976 467665664 7899999999864
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.15 E-value=2.9e-10 Score=123.14 Aligned_cols=58 Identities=14% Similarity=0.102 Sum_probs=44.9
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCc
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 283 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~t 283 (571)
++..+.+.|++|++++.|++|+.++++ +++||.+.+ .+|+..++. ++.||||+|++..
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 344555679999999999999986332 899999876 466655554 7899999999754
No 20
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.14 E-value=1.8e-10 Score=123.63 Aligned_cols=37 Identities=35% Similarity=0.560 Sum_probs=33.7
Q ss_pred CCCccEEEECCCcchHHHHHhhcCCCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~~ 80 (571)
..++||||||||++|+.+|..|++|.+|+||||+...
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~ 42 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVT 42 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTT
T ss_pred CCCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCC
Confidence 4579999999999999999999999999999999653
No 21
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.14 E-value=1.9e-10 Score=124.02 Aligned_cols=64 Identities=22% Similarity=0.279 Sum_probs=50.3
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
+...+.+.|++|+++++|++|..+++ ++++|.+.+. +|+..++. ++.||+|+|. ++..|+...|
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-~s~~l~~~~g 240 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGP-WVDTLREKDR 240 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCGG-GHHHHHHTTT
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEEE-----CCEEEECCCc-chHHHHHhcC
Confidence 33455667999999999999999766 8999999863 45555554 7999999996 6888877665
No 22
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.12 E-value=8.4e-11 Score=121.91 Aligned_cols=39 Identities=28% Similarity=0.447 Sum_probs=32.3
Q ss_pred CCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 42 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 42 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
+++.+|||||||+|++|+.+|..|++ |.+|+|||++...
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 44678999999999999999999999 9999999999753
No 23
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.09 E-value=9.8e-10 Score=119.28 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=44.8
Q ss_pred hhhhcCCCC-cEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcH
Q 008281 217 LLEYANPSG-LTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 284 (571)
Q Consensus 217 ~l~~~~~~g-~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp 284 (571)
++..+.+.+ ++|++++.|++|+.+++ +++||.+.+ .+|+..++. ++.||||+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 344455555 99999999999998765 999998875 467655554 78899999997654
No 24
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.08 E-value=3.1e-10 Score=116.53 Aligned_cols=36 Identities=25% Similarity=0.451 Sum_probs=33.4
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
|..++||||||+|++|+++|+.|++ |.+|+|||++.
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3568999999999999999999999 99999999984
No 25
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.07 E-value=1.5e-09 Score=117.39 Aligned_cols=64 Identities=19% Similarity=0.133 Sum_probs=48.9
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
++..+.+.|++|+++++|++|..+++ ++++|.+.+. +|+..++. ++.||+|+|++ +..|+...+
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEIK-----AKLVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----BSCEEECCGGG-HHHHHTTCC
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEEE-----cCEEEECCChh-HHHHHHhhc
Confidence 33455677999999999999998766 8999998863 45444554 79999999975 778775444
No 26
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.07 E-value=5.5e-10 Score=117.26 Aligned_cols=55 Identities=20% Similarity=0.375 Sum_probs=42.1
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHH
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 285 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~ 285 (571)
++..+++.|++|+++++|++|..+++ ++.+|.+. +|. ++. ++.||+|+|+...|.
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i~-----Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VLE-----TNHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EEE-----CSCEEECCCCSSSGG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EEE-----CCEEEECCCCCcCCC
Confidence 44455567999999999999998765 77788764 554 343 789999999988663
No 27
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.07 E-value=1.6e-10 Score=118.49 Aligned_cols=36 Identities=36% Similarity=0.530 Sum_probs=33.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcCCCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~ 79 (571)
+.++||||||+|++|+++|++|++|.+|+|||++..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~ 42 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQ 42 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCC
Confidence 457999999999999999999999999999999854
No 28
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.04 E-value=1.1e-09 Score=114.62 Aligned_cols=38 Identities=26% Similarity=0.352 Sum_probs=34.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 80 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~ 80 (571)
+..+|||||||+|++|+++|++|++ |. +|+|||++...
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 3568999999999999999999999 99 99999998754
No 29
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.96 E-value=7.2e-09 Score=110.35 Aligned_cols=60 Identities=15% Similarity=0.032 Sum_probs=44.6
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHHH
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 288 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl 288 (571)
+...+.+.|++|+++++|++|..++ ++.+|.+.+ .+|+..++. ++.||+|+|++ +..|+.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEE-----ESCEEECCGGG-HHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEE-----CCEEEECCChh-HHHHHH
Confidence 3345566799999999999998754 467788875 356555554 78999999974 777765
No 30
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.96 E-value=7.8e-10 Score=114.19 Aligned_cols=36 Identities=39% Similarity=0.584 Sum_probs=33.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+++|||||||+|++|+.+|..|++ |.+|+|||++..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 357999999999999999999999 999999999864
No 31
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.95 E-value=1.3e-09 Score=118.99 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=43.5
Q ss_pred hhcCCC--CcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcC
Q 008281 219 EYANPS--GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALG 282 (571)
Q Consensus 219 ~~~~~~--g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~ 282 (571)
..+++. |++|+.++.|++|+.++++ .+++.||.+.+ .+|+...+. ++.||||+|+++
T Consensus 174 ~~a~~~~~gV~i~~~~~v~dLi~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g 233 (662)
T 3gyx_A 174 EAAKNALGQDRIIERIFIVKLLLDKNT--PNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAV 233 (662)
T ss_dssp HHHHHHHCTTTEECSEEECCCEECSSS--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBC
T ss_pred HHHHhcCCCcEEEEceEEEEEEEeCCc--cceEEEEEEEEcCCCcEEEEE-----eCEEEECCCccc
Confidence 344444 9999999999999987651 12999998876 456666664 799999999976
No 32
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.95 E-value=2.9e-09 Score=116.63 Aligned_cols=58 Identities=14% Similarity=0.051 Sum_probs=43.2
Q ss_pred hhcCCC-Cc-EEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCc
Q 008281 219 EYANPS-GL-TLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 283 (571)
Q Consensus 219 ~~~~~~-g~-~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~t 283 (571)
..+++. |+ +|++++.|++|+.+++ ..++++||.+.+ .+|+...+. ++.||||+|++..
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~~~--~~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKDNN--DPNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEECTT--CTTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHhcCCCcEEEecCEEEEEEEcCC--ccceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 344444 99 9999999999998654 112899998865 456655554 7999999999864
No 33
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.95 E-value=5e-09 Score=108.30 Aligned_cols=35 Identities=40% Similarity=0.603 Sum_probs=32.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC--C-CeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ--N-ASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g-~~VlvlE~G~ 78 (571)
..++||||||+|++|+++|+.|++ | .+|+|||++.
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 568999999999999999999998 8 8999999986
No 34
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.94 E-value=5.2e-09 Score=115.72 Aligned_cols=35 Identities=31% Similarity=0.325 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
..+||||||||++|+++|+.|++ |.+|+|||++..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 45999999999999999999999 999999999753
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.93 E-value=3e-09 Score=109.84 Aligned_cols=36 Identities=33% Similarity=0.576 Sum_probs=32.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
..++||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 2 ~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 2 TESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 346999999999999999999999 999999999864
No 36
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.93 E-value=2.5e-09 Score=121.01 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=44.1
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
+...+++.|++|+++++|++|..+++ ++++|.+. +| ++. ++.||+|+|+ +++.|+...|
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t~--~G---~i~-----Ad~VV~AaG~-~s~~l~~~~g 215 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGG-----RVTGVQTA--DG---VIP-----ADIVVSCAGF-WGAKIGAMIG 215 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TE---EEE-----CSEEEECCGG-GHHHHHHTTT
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCC-----EEEEEEEC--Cc---EEE-----CCEEEECCcc-chHHHHHHhC
Confidence 34455667999999999999998765 77777653 44 343 7899999997 4677776555
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.92 E-value=2.8e-09 Score=118.09 Aligned_cols=36 Identities=31% Similarity=0.343 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
..++||||||||++|+++|+.|++ |.+|+|||++..
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 346999999999999999999999 999999999854
No 38
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.90 E-value=5.3e-09 Score=107.26 Aligned_cols=39 Identities=31% Similarity=0.521 Sum_probs=34.0
Q ss_pred CCCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 41 AQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 41 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
...+.+|||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 12 ~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 12 RAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp --CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred hccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 344568999999999999999999999 999999999853
No 39
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.84 E-value=5.4e-09 Score=109.76 Aligned_cols=33 Identities=33% Similarity=0.684 Sum_probs=31.4
Q ss_pred CCccEEEECCCcchHHHHHhhcC-C-CeEEEEecC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERG 77 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G 77 (571)
.++||||||+|++|+++|++|++ | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 68999999999999999999999 9 999999993
No 40
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.83 E-value=1.1e-08 Score=108.07 Aligned_cols=30 Identities=30% Similarity=0.453 Sum_probs=29.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
||||||||++|+++|.+|++ |.+|+|||++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 89999999999999999998 9999999998
No 41
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.83 E-value=1.3e-08 Score=104.49 Aligned_cols=36 Identities=25% Similarity=0.521 Sum_probs=33.3
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
++|||||||||++|+++|+.|++ |.+|+||||....
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 57999999999999999999999 9999999998643
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.82 E-value=3.8e-08 Score=101.03 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+|||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 6899999999999999999999 999999999864
No 43
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.79 E-value=1.4e-08 Score=108.20 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=44.7
Q ss_pred cCCCceecHHHhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHH
Q 008281 206 DQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 285 (571)
Q Consensus 206 ~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~ 285 (571)
+..|...-+..+...+++.|++|+++++|++|+.+++ +++||++. +|+. + .++.||++++...+.+
T Consensus 216 p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~--~-----~ad~VV~~a~~~~~~~ 281 (501)
T 4dgk_A 216 PRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRR--F-----LTQAVASNADVVHTYR 281 (501)
T ss_dssp ETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSCEEECCC------
T ss_pred eCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcE--E-----EcCEEEECCCHHHHHH
Confidence 3444333333345566778999999999999999887 99999885 6654 3 2789999999888877
Q ss_pred HHH
Q 008281 286 LLM 288 (571)
Q Consensus 286 LLl 288 (571)
.|+
T Consensus 282 ~Ll 284 (501)
T 4dgk_A 282 DLL 284 (501)
T ss_dssp ---
T ss_pred Hhc
Confidence 665
No 44
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.78 E-value=3.1e-08 Score=97.19 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~ 79 (571)
.+|||||||+|++|+.+|..|++ |.+|+|||+...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 57899999999999999999998 899999999864
No 45
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.78 E-value=1.4e-08 Score=105.64 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=44.0
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHH
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 288 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl 288 (571)
+...+.+.|++|+++++|++|..+++ ++++|.+ +|+ ++. ++.||+|+++..+.+||.
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~--~~~-----ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG-----KAAGIIA---DDR--IHD-----ADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTE--EEE-----CSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC-----EEEEEEE---CCE--EEE-----CCEEEECCCHHHHHHhcC
Confidence 44455667999999999999999876 8888865 353 233 789999999887777553
No 46
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.77 E-value=3e-08 Score=102.06 Aligned_cols=35 Identities=26% Similarity=0.561 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.+|||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999864
No 47
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.76 E-value=2.3e-08 Score=102.08 Aligned_cols=35 Identities=31% Similarity=0.536 Sum_probs=32.6
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
+|||||||+|++|+++|+.|++ |.+|+|||++...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 5899999999999999999999 9999999998643
No 48
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.72 E-value=5.1e-08 Score=104.11 Aligned_cols=54 Identities=24% Similarity=0.294 Sum_probs=43.8
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcC
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 282 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~ 282 (571)
..+.+.|++|+.+++|++|..+++ ++++|.+.+.+|+..++. ++.||.|+|...
T Consensus 119 ~~a~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~S 172 (512)
T 3e1t_A 119 RNSERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMAH-----ARFIVDASGNRT 172 (512)
T ss_dssp HHHHHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEEE-----EEEEEECCCTTC
T ss_pred HHHHhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEEE-----cCEEEECCCcch
Confidence 345557999999999999998766 899999987677655554 799999999743
No 49
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.71 E-value=6.6e-08 Score=101.60 Aligned_cols=55 Identities=18% Similarity=0.263 Sum_probs=42.8
Q ss_pred hhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCceeEEeeecCCCeeEEEecCCcC
Q 008281 218 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALG 282 (571)
Q Consensus 218 l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~a~~~VVLaAGai~ 282 (571)
+..+.+.|++|+++++|++|..+++ +++||.+.+. +|+..++. ++.||.|.|+..
T Consensus 107 ~~~a~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~~-----ad~VV~AdG~~s 162 (453)
T 3atr_A 107 LKEAQDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTVY-----SKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSEEEECCGGGC
T ss_pred HHHHHHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEEE-----cCEEEECcCCch
Confidence 3444557999999999999998766 8889988764 56544554 799999999753
No 50
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.69 E-value=2.7e-08 Score=106.08 Aligned_cols=36 Identities=28% Similarity=0.309 Sum_probs=33.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
...+||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 346999999999999999999999 999999999964
No 51
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.67 E-value=6.5e-08 Score=100.96 Aligned_cols=41 Identities=34% Similarity=0.526 Sum_probs=37.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 83 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~ 83 (571)
++++|||||||+|.+|+++|+.|++ |++|+|||+++...+.
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGE 58 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 4578999999999999999999999 9999999999877643
No 52
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.67 E-value=7.7e-08 Score=99.95 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.+|||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999864
No 53
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.67 E-value=9.1e-08 Score=95.21 Aligned_cols=35 Identities=29% Similarity=0.493 Sum_probs=32.3
Q ss_pred CCccEEEECCCcchHHHHHhhcC---CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (571)
.+|||||||+|++|+.+|+.|++ |.+|+|||++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 36999999999999999999998 899999999864
No 54
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.60 E-value=1.2e-07 Score=102.52 Aligned_cols=36 Identities=33% Similarity=0.469 Sum_probs=33.4
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+.++||||||||++|+++|..|++ |.+|+|||+...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 457999999999999999999999 999999999854
No 55
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.56 E-value=1.4e-07 Score=98.13 Aligned_cols=36 Identities=22% Similarity=0.424 Sum_probs=32.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
.||||||||++|+++|++|++ |.+|+|||+.+...+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 389999999999999999999 999999999876644
No 56
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.53 E-value=6.7e-08 Score=99.95 Aligned_cols=35 Identities=40% Similarity=0.661 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC---CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (571)
.++||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 46999999999999999999997 799999999854
No 57
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.50 E-value=1.3e-07 Score=95.42 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhcC----CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (571)
+||||||+|++|+++|+.|++ |.+|+|+||+..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 599999999999999999987 689999999864
No 58
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.48 E-value=7.7e-07 Score=88.00 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=31.8
Q ss_pred CCccEEEECCCcchHHHHHhhcC---CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (571)
.+|||+|||+|++|+.+|..|++ |.+|+|+|++..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 45799999999999999999997 789999999864
No 59
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.47 E-value=2.7e-07 Score=98.83 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+|||||||||.+|+.+|..|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 47999999999999999999999 99999999984
No 60
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.44 E-value=9e-07 Score=94.98 Aligned_cols=37 Identities=27% Similarity=0.398 Sum_probs=33.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
..++||||||+|++|+++|+.|++ |.+|+||||....
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 457999999999999999999999 9999999998643
No 61
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.44 E-value=3.7e-07 Score=92.19 Aligned_cols=35 Identities=29% Similarity=0.485 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+.||+||||+|++|+.+|..|++ |.+|+|||+...
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~ 37 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 36899999999999999999999 999999999864
No 62
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.43 E-value=1.3e-06 Score=94.54 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=42.4
Q ss_pred hhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe----CCCce-------eEEeeecCCCeeEEEecCCcCc
Q 008281 218 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD----ATGAK-------HRAYLKNGPKNEIIVSAGALGS 283 (571)
Q Consensus 218 l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~----~~g~~-------~~~~~~~~a~~~VVLaAGai~t 283 (571)
...+++.|++|++++.|++|+.++++ +++||.+.+ .+|+. .++. ++.||+|.|+...
T Consensus 151 ~~~a~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i~-----Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 151 GEQAEALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLELH-----AKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEEE-----CSEEEECCCTTCH
T ss_pred HHHHHHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEEE-----CCEEEEeeCCCch
Confidence 34555569999999999999987653 788888763 34532 3443 7999999998665
No 63
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.41 E-value=6.5e-06 Score=81.66 Aligned_cols=61 Identities=18% Similarity=0.245 Sum_probs=46.7
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 220 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 220 ~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
..++.|+++++++.|++|..+ + ++.+|++.+ .+|+..++. ++.||+|+|..-+..+|..+|
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~g 260 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGD-K-----VVKQVVVENLKTGEIKELN-----VNGVFIEIGFDPPTDFAKSNG 260 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEECCHHHHHHTT
T ss_pred HHhCCCcEEEeCCEEEEEecc-C-----ceeEEEEEECCCCceEEEE-----cCEEEEEECCCCChhHHhhcC
Confidence 345569999999999999865 3 677788875 346655554 799999999877777877665
No 64
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.41 E-value=4.1e-07 Score=97.85 Aligned_cols=34 Identities=38% Similarity=0.558 Sum_probs=32.2
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+|||||||||++|+.+|..|++ |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 57999999999999999999999 99999999974
No 65
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.38 E-value=3.6e-07 Score=91.70 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=32.3
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.+||||||+|++|+++|+.|++ |.+|+|||+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4799999999999999999999 9999999998643
No 66
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.38 E-value=2e-06 Score=91.23 Aligned_cols=38 Identities=34% Similarity=0.397 Sum_probs=34.4
Q ss_pred CCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 42 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 42 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.+..++||||||+|++|+++|..|++ |.+|+||||...
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE 45 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 34678999999999999999999999 999999999864
No 67
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.35 E-value=2.5e-06 Score=88.12 Aligned_cols=38 Identities=24% Similarity=0.220 Sum_probs=32.6
Q ss_pred CCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 42 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 42 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
...+.|||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 33568999999999999999999999 999999999864
No 68
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.34 E-value=5.7e-07 Score=90.14 Aligned_cols=56 Identities=5% Similarity=0.103 Sum_probs=42.5
Q ss_pred CCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 222 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 222 ~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
+..|+++++++.|++|..+++ ++.+|.+.+. +|+..++. ++.||+|+|..-++.++
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDLP-----VSGLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEEE-----CSEEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEEE-----eCEEEEEeCCCCChhHh
Confidence 345999999999999988765 7888998863 34444553 79999999976555544
No 69
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.33 E-value=2.5e-06 Score=90.52 Aligned_cols=36 Identities=33% Similarity=0.418 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+.++||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ 46 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 568999999999999999999999 999999999854
No 70
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.33 E-value=8.8e-07 Score=95.25 Aligned_cols=36 Identities=31% Similarity=0.576 Sum_probs=32.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
...+|||||||||.+|+.+|..|++ |.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3567999999999999999999999 99999999874
No 71
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.32 E-value=3.9e-06 Score=86.32 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+..+||+|||+|++|+++|..|++ |.+|+|+|+...
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357899999999999999999999 999999999854
No 72
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.30 E-value=1.5e-06 Score=89.40 Aligned_cols=36 Identities=28% Similarity=0.371 Sum_probs=32.6
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
..++||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 346999999999999999999999 999999999853
No 73
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.27 E-value=2.8e-06 Score=88.87 Aligned_cols=37 Identities=41% Similarity=0.547 Sum_probs=33.6
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CC--eEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~~~ 80 (571)
...+||+|||+|++|+++|..|++ |. +|+|+|+....
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 43 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCC
Confidence 457899999999999999999999 98 99999998654
No 74
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.27 E-value=1.4e-06 Score=93.76 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=31.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.+|||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 47999999999999999999999 9999999998643
No 75
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.25 E-value=1.8e-06 Score=86.43 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+..+|+||||+|++|+.+|..|++ |.+|+|+|+...
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 39 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE 39 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 457999999999999999999999 999999999853
No 76
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.25 E-value=6.5e-07 Score=94.96 Aligned_cols=36 Identities=25% Similarity=0.417 Sum_probs=33.4
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
...+||+|||||++|+.+|..|++ |.+|+|||+...
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 457999999999999999999999 999999999854
No 77
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.24 E-value=4.1e-07 Score=87.82 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=32.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
++||+|||||++|+++|+.|++ |.+|+||||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5899999999999999999999 9999999998654
No 78
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.23 E-value=2e-06 Score=89.09 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=46.8
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
...++.|++|++++.|++|..+++ ++++|++. +|+. + .++.||+|+|..-+..+|..+|
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~g 260 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGSV--I-----PADIVIVGIGIVPCVGALISAG 260 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSCE--E-----ECSEEEECSCCEESCHHHHHTT
T ss_pred HHHHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCccChHHHHhCC
Confidence 355668999999999999987665 78888875 5643 3 3799999999887778887776
No 79
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.20 E-value=3.6e-06 Score=90.33 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=33.8
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
..++||||||+|++|+.+|.+|++ |.+|+|||++...
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV 51 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 457999999999999999999999 9999999998653
No 80
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.19 E-value=3.4e-06 Score=90.42 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=33.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
...+||||||+|++|+.+|.+|++ |.+|+|||+++..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 56 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV 56 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 457999999999999999999999 9999999998643
No 81
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.19 E-value=2.4e-06 Score=91.38 Aligned_cols=36 Identities=19% Similarity=0.387 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhc-C-CCeEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLS-Q-NASVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La-~-g~~VlvlE~G~~~ 80 (571)
.++||||||+|++|+.+|.+|+ + |.+|+|||+.+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~ 44 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP 44 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC
Confidence 4699999999999999999999 8 9999999998643
No 82
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.15 E-value=7.6e-07 Score=88.11 Aligned_cols=36 Identities=25% Similarity=0.509 Sum_probs=31.7
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+++|||||||||++|+++|.+|++ |++|+|+|++.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3678999999999999999999999 99999999874
No 83
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.13 E-value=4e-06 Score=89.83 Aligned_cols=37 Identities=30% Similarity=0.391 Sum_probs=33.6
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
...+||||||+|++|+.+|.+|.+ |.+|+|||++...
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~ 44 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV 44 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 457999999999999999999999 9999999998643
No 84
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.13 E-value=1.5e-05 Score=78.75 Aligned_cols=59 Identities=19% Similarity=0.115 Sum_probs=45.1
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHH
Q 008281 220 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 288 (571)
Q Consensus 220 ~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl 288 (571)
..++.|+++++++.|++|..+++ ++.+|.+...+|+..++ .++.||+|+|..-++.++.
T Consensus 192 ~~~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 192 VKKNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDL-----NVPGIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHHCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEE-----CCSCEEECSCEEECCGGGB
T ss_pred HHhcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEe-----ecCeEEEEEcCCCCchhhh
Confidence 33578999999999999987765 88889887556765555 4799999999765555443
No 85
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.12 E-value=3.1e-05 Score=79.79 Aligned_cols=59 Identities=15% Similarity=0.311 Sum_probs=46.8
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
...++.|+++++++.|++|..+++ ++.+|.+. +|+. + .++.||+|+|..-+..++..+|
T Consensus 192 ~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 192 DRHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGNT--L-----PCDLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTT
T ss_pred HHHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECcCCccCHHHHHhCC
Confidence 355678999999999999988765 88888774 5643 3 3799999999887778887776
No 86
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.12 E-value=7e-06 Score=83.30 Aligned_cols=34 Identities=38% Similarity=0.587 Sum_probs=31.9
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
.+||+||||+|++|+.+|.+|++ |. +|+|||+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 36999999999999999999999 98 999999985
No 87
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.12 E-value=1.1e-05 Score=86.57 Aligned_cols=36 Identities=31% Similarity=0.499 Sum_probs=33.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
..++||||||+|++|+++|..|++ |.+|+||||...
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDG 60 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 347999999999999999999999 999999999864
No 88
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.09 E-value=1.9e-05 Score=82.94 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=33.3
Q ss_pred CCccEEEECCCcchHHHHHhhcC-C-----CeEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-N-----ASVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g-----~~VlvlE~G~~~ 80 (571)
..|||||||+|++|+.+|..|++ | .+|+|||+....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCC
Confidence 57999999999999999999999 8 999999999753
No 89
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.09 E-value=1.3e-06 Score=86.58 Aligned_cols=34 Identities=38% Similarity=0.551 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+||+||||||+||+.+|.+|++ |++|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 48999999999999999999999 99999999874
No 90
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.08 E-value=1.2e-05 Score=84.59 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhcC----CCe---EEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ----NAS---VLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~----g~~---VlvlE~G~~~ 80 (571)
+||+|||||++|+++|..|++ |.+ |+|+|+....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~ 43 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADW 43 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCC
Confidence 699999999999999999986 788 9999998654
No 91
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.07 E-value=5.7e-06 Score=82.48 Aligned_cols=35 Identities=37% Similarity=0.394 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
..+||||||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 41 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 36899999999999999999999 999999999864
No 92
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.05 E-value=2e-05 Score=77.17 Aligned_cols=33 Identities=39% Similarity=0.664 Sum_probs=31.1
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.||++|||+|++|+.+|..|++ |.+|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999 99999999874
No 93
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.03 E-value=1.6e-06 Score=86.01 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=32.7
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
|.+.||+||||+|+||+++|.+|++ |++|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 3557999999999999999999999 99999999874
No 94
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.98 E-value=3e-06 Score=88.80 Aligned_cols=41 Identities=29% Similarity=0.463 Sum_probs=37.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 83 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~ 83 (571)
++.+|||||||+|.+|+++|..|++ |++|+|||+.+..++.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 3568999999999999999999999 9999999999887654
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.98 E-value=2.7e-06 Score=85.05 Aligned_cols=37 Identities=27% Similarity=0.477 Sum_probs=33.0
Q ss_pred CCccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSPY 81 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~~ 81 (571)
.++||+|||||++|+++|++|++ |++|+|+|++....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 47899999999999999999974 89999999987543
No 96
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.94 E-value=4.5e-06 Score=84.73 Aligned_cols=37 Identities=27% Similarity=0.312 Sum_probs=34.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
|..++||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 4568999999999999999999999 999999999863
No 97
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.91 E-value=3.5e-06 Score=89.71 Aligned_cols=38 Identities=29% Similarity=0.495 Sum_probs=34.9
Q ss_pred CCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYG 82 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~ 82 (571)
.++||||||||++|+++|++|++ |.+|+|||+.+..++
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 47999999999999999999986 899999999987765
No 98
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.88 E-value=7.5e-05 Score=79.58 Aligned_cols=58 Identities=22% Similarity=0.297 Sum_probs=43.3
Q ss_pred hcCC-CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 220 YANP-SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 220 ~~~~-~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
.+.+ .|+++++++.|++|..+++ ++++|.+.+ .+|+..++. .+.||+|+|..-+..+|
T Consensus 399 ~l~~~~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 399 KVRSLKNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSVA-----LAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp HHTTCTTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEESCGGG
T ss_pred HHhcCCCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEEE-----cCEEEECcCCCCCchHH
Confidence 3444 6999999999999987655 888999986 346555554 78999999976544444
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.78 E-value=1e-05 Score=76.52 Aligned_cols=34 Identities=32% Similarity=0.427 Sum_probs=32.0
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 36999999999999999999999 99999999983
No 100
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.77 E-value=8.5e-06 Score=84.68 Aligned_cols=35 Identities=43% Similarity=0.647 Sum_probs=32.4
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 81 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (571)
|||||||||++|+++|++|++ |.+|+|||+.+...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 799999999999999999999 99999999976543
No 101
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.74 E-value=1.7e-05 Score=81.51 Aligned_cols=38 Identities=34% Similarity=0.474 Sum_probs=34.1
Q ss_pred CCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 42 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 42 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.++.++||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 22 ~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 22 NLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp -CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred cccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 34567999999999999999999999 999999999864
No 102
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.71 E-value=1.4e-05 Score=84.45 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=32.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
+.+|||||||+|++|+++|.+|++ |.+|+|||++.
T Consensus 24 ~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 59 (484)
T 3o0h_A 24 SFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR 59 (484)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC
Confidence 357999999999999999999999 99999999953
No 103
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.69 E-value=1.5e-05 Score=84.93 Aligned_cols=40 Identities=33% Similarity=0.452 Sum_probs=34.8
Q ss_pred ccCCCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 39 TAAQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 39 ~~~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
..+++..+|||||||+|++|+.+|.+|++ |.+|+|+|+..
T Consensus 25 ~~~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 25 EDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp -CCCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cccCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 33445678999999999999999999999 99999999964
No 104
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.69 E-value=1.7e-05 Score=80.93 Aligned_cols=40 Identities=35% Similarity=0.576 Sum_probs=35.7
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
+...+|++|||+|++|+++|++|++ |.+|+|||+.+...+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 3568999999999999999999999 999999999876543
No 105
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.68 E-value=1.6e-05 Score=82.04 Aligned_cols=36 Identities=33% Similarity=0.425 Sum_probs=32.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCe-EEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NAS-VLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~-VlvlE~G~~ 79 (571)
+.++||||||+|++|+++|..|++ |.+ |+|||+...
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 457999999999999999999999 999 999999864
No 106
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.68 E-value=1.9e-05 Score=81.24 Aligned_cols=40 Identities=28% Similarity=0.471 Sum_probs=35.6
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYG 82 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~ 82 (571)
|..++|+||||+|++|+++|++|++ |.+|+|||+.+...+
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 3568999999999999999999998 799999999976654
No 107
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.63 E-value=2.3e-05 Score=79.65 Aligned_cols=37 Identities=41% Similarity=0.663 Sum_probs=33.6
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
+||++|||+|++|+++|.+|++ |.+|+|+|++....+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 4799999999999999999999 999999999876543
No 108
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.63 E-value=2.5e-05 Score=82.06 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=31.8
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+|||||||+|++|+++|.+|++ |.+|+|||++.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 47999999999999999999999 99999999943
No 109
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.62 E-value=2.2e-05 Score=83.76 Aligned_cols=39 Identities=28% Similarity=0.467 Sum_probs=34.6
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
...+||||||||++|+++|++|++ |.+|+|||+.+...+
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 356899999999999999999999 999999999876644
No 110
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.62 E-value=2.4e-05 Score=82.45 Aligned_cols=42 Identities=24% Similarity=0.403 Sum_probs=33.7
Q ss_pred CCCCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 41 AQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 41 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
++....+||||||||++|+++|+.|++ |.+|+|||+.....+
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 344568999999999999999999999 999999999986654
No 111
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.61 E-value=0.00031 Score=72.31 Aligned_cols=58 Identities=17% Similarity=0.113 Sum_probs=43.5
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
...++.|+++++++.|++|..++ ++.+|++. +|+. + .++.||+|+|..-+..+|..+|
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~~--i-----~aD~Vv~a~G~~p~~~l~~~~g 250 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSGEG------QLEQVMAS--DGRS--F-----VADSALICVGAEPADQLARQAG 250 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEECSS------SCCEEEET--TSCE--E-----ECSEEEECSCEEECCHHHHHTT
T ss_pred HHHHHCCCEEEeCCEEEEEeccC------cEEEEEEC--CCCE--E-----EcCEEEEeeCCeecHHHHHhCC
Confidence 34556799999999999997643 44566664 5643 3 3799999999887778887776
No 112
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.61 E-value=2.4e-05 Score=82.44 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=32.5
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+||+||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 47999999999999999999999 99999999986
No 113
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.61 E-value=3.1e-05 Score=80.18 Aligned_cols=39 Identities=31% Similarity=0.328 Sum_probs=35.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-C-CeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~~~ 82 (571)
...+||||||||++|+++|++|++ | .+|+|+|+.+...+
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 357899999999999999999999 9 89999999877654
No 114
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.61 E-value=5.8e-05 Score=80.01 Aligned_cols=61 Identities=15% Similarity=0.130 Sum_probs=40.9
Q ss_pred HHhhh-hcCCCCcEEEcCcEEEEEEecCCCCC--CCeEEEEEEEeC-CCceeEEeeecCCCeeEEEecCC
Q 008281 215 ADLLE-YANPSGLTLLLHASVHKVLFRIKGKA--RPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGA 280 (571)
Q Consensus 215 ~~~l~-~~~~~g~~i~~~~~V~~i~~~~~~~~--~~~~~gV~~~~~-~g~~~~~~~~~~a~~~VVLaAGa 280 (571)
..|+. .+++.+..|.++++|++|..++.+.. .....-|.+.+. .|+..++. ++.||+|+|.
T Consensus 148 ~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~-----ar~vVlatG~ 212 (501)
T 4b63_A 148 EDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARR-----TRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEE-----EEEEEECCCC
T ss_pred HHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEE-----eCEEEECcCC
Confidence 44776 56667778999999999998654311 113455666653 35554543 7999999994
No 115
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.60 E-value=1.9e-05 Score=82.93 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=33.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-C------CeEEEEecCCCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-N------ASVLLLERGGSPYG 82 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g------~~VlvlE~G~~~~~ 82 (571)
.+||||||||++|+++|++|++ | .+|+|||+.+...+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 5899999999999999999999 9 99999999876543
No 116
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.59 E-value=2.4e-05 Score=77.68 Aligned_cols=35 Identities=29% Similarity=0.499 Sum_probs=32.0
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
|..+||+||||+|++|+.+|..|++ |.+|+|||+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3457999999999999999999999 9999999995
No 117
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.59 E-value=3.3e-05 Score=80.31 Aligned_cols=41 Identities=29% Similarity=0.445 Sum_probs=36.8
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 83 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~ 83 (571)
|..+||+||||+|.+|+++|.+|++ |.+|+|||+.....+.
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccc
Confidence 3568999999999999999999999 9999999999876654
No 118
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.59 E-value=2.8e-05 Score=79.32 Aligned_cols=36 Identities=31% Similarity=0.299 Sum_probs=32.7
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
..+||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 47999999999999999999999 9999999998643
No 119
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.58 E-value=2.1e-05 Score=82.22 Aligned_cols=38 Identities=29% Similarity=0.380 Sum_probs=34.7
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
.++||||||+|++|+++|++|++ |.+|+|||+.....+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 47899999999999999999999 999999999876654
No 120
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.58 E-value=2.3e-05 Score=82.43 Aligned_cols=37 Identities=32% Similarity=0.471 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
..+||+||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 347999999999999999999999 9999999976543
No 121
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.57 E-value=3.1e-05 Score=82.02 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=31.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
+.+|||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 346999999999999999999999 9999999987654
No 122
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.56 E-value=3.1e-05 Score=78.29 Aligned_cols=38 Identities=29% Similarity=0.276 Sum_probs=33.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
|+..+||||||+|++|+.+|..|++ |.+|+|||+.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~ 49 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL 49 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 3457999999999999999999999 9999999998643
No 123
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.56 E-value=4e-05 Score=81.03 Aligned_cols=40 Identities=30% Similarity=0.404 Sum_probs=36.0
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 83 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~ 83 (571)
...+||||||||++|+++|+.|++ |.+|+|||+.+...+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 457899999999999999999999 9999999999876553
No 124
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.55 E-value=3.1e-05 Score=79.39 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
+|||||||+|++|+++|..|++ |.+|+|||+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5899999999999999999999 99999999975
No 125
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.54 E-value=2.4e-05 Score=83.43 Aligned_cols=40 Identities=38% Similarity=0.429 Sum_probs=35.8
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-C-CeEEEEecCCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYGN 83 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~~~~ 83 (571)
+..+||||||||++|+++|++|++ | .+|+|||+.+...+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 346899999999999999999999 9 999999999876653
No 126
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.54 E-value=3.3e-05 Score=82.27 Aligned_cols=34 Identities=38% Similarity=0.652 Sum_probs=31.8
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+||+||||+|++|.++|.++++ |+||+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 5999999999999999999999 999999998653
No 127
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.53 E-value=4.4e-05 Score=77.29 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=34.5
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecC-CCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG-GSPY 81 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G-~~~~ 81 (571)
...+||+|||+|++|+++|++|++ |.+|+|||+. ....
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 567899999999999999999999 9999999998 6544
No 128
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.53 E-value=2.8e-05 Score=82.07 Aligned_cols=36 Identities=33% Similarity=0.624 Sum_probs=33.1
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++.+|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 3457999999999999999999999 99999999874
No 129
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.51 E-value=2.9e-05 Score=82.16 Aligned_cols=34 Identities=35% Similarity=0.458 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+||+||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 36999999999999999999999 99999999975
No 130
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.50 E-value=3.8e-05 Score=76.42 Aligned_cols=34 Identities=44% Similarity=0.702 Sum_probs=32.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
...+|++|||+|++|+.+|..|++ |.+|+|||+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 457999999999999999999999 9999999998
No 131
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.50 E-value=5.2e-05 Score=80.50 Aligned_cols=39 Identities=28% Similarity=0.353 Sum_probs=34.6
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
...+||||||+|++|+++|++|++ |.+|+|||+.+...+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 457899999999999999999999 999999999987654
No 132
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.46 E-value=4.7e-05 Score=79.90 Aligned_cols=35 Identities=31% Similarity=0.551 Sum_probs=32.6
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.++||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 457999999999999999999999 99999999984
No 133
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.46 E-value=5e-05 Score=80.21 Aligned_cols=34 Identities=38% Similarity=0.463 Sum_probs=31.7
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
..+||+||||+|++|+++|.+|++ |.+|+|+|++
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 457999999999999999999999 9999999964
No 134
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.46 E-value=4.9e-05 Score=79.47 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=32.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
..+||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 357999999999999999999999 99999999984
No 135
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.46 E-value=5.5e-05 Score=79.61 Aligned_cols=36 Identities=28% Similarity=0.470 Sum_probs=32.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC--eEEEEecCCCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSPYG 82 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~~~~~ 82 (571)
+||||||||++|+++|++|++ |. +|+|||+.+...+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 699999999999999999999 98 9999999876543
No 136
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.45 E-value=5.5e-05 Score=68.23 Aligned_cols=32 Identities=38% Similarity=0.715 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
||++|||+|++|+.+|..|++ |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999986
No 137
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.44 E-value=4.5e-05 Score=76.86 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=29.9
Q ss_pred cEEEECCCcchHHHHHhhcC-C------CeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N------ASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g------~~VlvlE~G~ 78 (571)
||||||+|++|+++|+.|++ | .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 89999999999999999999 8 8999999986
No 138
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.43 E-value=6.5e-05 Score=78.93 Aligned_cols=35 Identities=31% Similarity=0.387 Sum_probs=32.7
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
+..||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457999999999999999999999 99999999983
No 139
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.42 E-value=7.6e-05 Score=79.60 Aligned_cols=63 Identities=16% Similarity=0.268 Sum_probs=45.5
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHH-HHHhhc
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ-LLMLSG 291 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~-LLl~Sg 291 (571)
..+++.|++|++++.|++|..++++ +++++.+...+|+ .++ .++.||+|+|..-+.. +|..+|
T Consensus 263 ~~l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i-----~aD~Vv~A~G~~p~~~~~l~~~g 326 (523)
T 1mo9_A 263 DRMKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRI-----ETDFVFLGLGEQPRSAELAKILG 326 (523)
T ss_dssp HHHHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEE-----ECSCEEECCCCEECCHHHHHHHT
T ss_pred HHHHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEE-----EcCEEEECcCCccCCccCHHHcC
Confidence 4556679999999999999875442 6666666544563 234 3799999999877766 676666
No 140
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.41 E-value=0.00033 Score=71.48 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=31.7
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.+..-|+|||+|++|+.+|.+|.. +.+|+|+|+.+.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 456779999999999999999977 899999999864
No 141
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.41 E-value=6.7e-05 Score=78.94 Aligned_cols=36 Identities=28% Similarity=0.348 Sum_probs=33.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-C--CeEEEEecCCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSPY 81 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~~~~ 81 (571)
.+||||||+|++|+++|++|++ | .+|+|||+.+...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~G 42 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLG 42 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSB
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCC
Confidence 6899999999999999999999 8 9999999976543
No 142
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.40 E-value=7.1e-05 Score=78.99 Aligned_cols=39 Identities=28% Similarity=0.393 Sum_probs=34.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-C-CeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~~~ 82 (571)
...+|++|||+|++|+++|++|++ | .+|+|+|+.+...+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 457999999999999999999999 8 79999999976543
No 143
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.40 E-value=6.1e-05 Score=79.73 Aligned_cols=37 Identities=35% Similarity=0.489 Sum_probs=34.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
++||||||+|++|+++|++|++ |.+|+|||+.+...+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 4899999999999999999999 999999999876654
No 144
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.38 E-value=5.7e-05 Score=78.43 Aligned_cols=33 Identities=30% Similarity=0.323 Sum_probs=30.9
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+||||||+|++|+++|..|++ |.+|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999 99999999985
No 145
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.38 E-value=6.3e-05 Score=79.30 Aligned_cols=35 Identities=37% Similarity=0.681 Sum_probs=32.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
+.+||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 357999999999999999999999 99999999974
No 146
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.38 E-value=9.4e-05 Score=75.54 Aligned_cols=37 Identities=19% Similarity=0.390 Sum_probs=33.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
++|++|||+|++|+++|++|++ |.+|+|+|+.....+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 5899999999999999999999 999999999876543
No 147
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.38 E-value=5.8e-05 Score=79.65 Aligned_cols=36 Identities=28% Similarity=0.500 Sum_probs=33.0
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+.+||+||||+|++|+.+|.+|++ |.+|+|+|+...
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 457999999999999999999999 999999999654
No 148
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.37 E-value=5.9e-05 Score=79.72 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=32.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
..+||+||||+|++|+++|.+|++ |.+|+|+|+..
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 357999999999999999999999 99999999843
No 149
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.35 E-value=5.3e-05 Score=79.88 Aligned_cols=36 Identities=33% Similarity=0.448 Sum_probs=32.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
+.+||+||||+|++|+.+|.+|++ |.+|+|+|+.+.
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 357999999999999999999999 999999999654
No 150
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.34 E-value=5.8e-05 Score=74.79 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=31.0
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
..+|++|||+|++|+.+|..|++ |.+|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 46999999999999999999999 9999999965
No 151
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.31 E-value=0.00012 Score=76.86 Aligned_cols=37 Identities=30% Similarity=0.423 Sum_probs=33.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
+++||+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 457999999999999999999999 9999999998644
No 152
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.28 E-value=7.7e-05 Score=74.56 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=31.7
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
...+|+||||+|++|+.+|..|++ |.+|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 567999999999999999999999 9999999965
No 153
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.28 E-value=0.00013 Score=77.37 Aligned_cols=39 Identities=31% Similarity=0.416 Sum_probs=35.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
...+||||||+|++|+.+|+.|++ |.+|+|||+.....+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 457899999999999999999999 999999999876554
No 154
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.28 E-value=8.8e-05 Score=77.86 Aligned_cols=34 Identities=38% Similarity=0.573 Sum_probs=32.2
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++||+||||+|++|+.+|.+|++ |.+|+|+|+..
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 37999999999999999999999 99999999986
No 155
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.26 E-value=0.00011 Score=77.20 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=32.5
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
+||+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 5899999999999999999999 9999999998643
No 156
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.25 E-value=0.00012 Score=77.59 Aligned_cols=33 Identities=42% Similarity=0.728 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
+||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999 99999999985
No 157
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.25 E-value=8.9e-05 Score=77.82 Aligned_cols=32 Identities=28% Similarity=0.480 Sum_probs=31.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
+||+||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 6899999999999999999999 9999999998
No 158
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.24 E-value=0.00012 Score=72.04 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=29.4
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
+||++|||+|++|+.+|.+|++ |.+|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 999999985
No 159
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.24 E-value=0.0001 Score=72.59 Aligned_cols=31 Identities=35% Similarity=0.632 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
||++|||+|++|+.+|..|++ |. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 799999999999999999999 99 99999996
No 160
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.24 E-value=0.00023 Score=78.50 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=35.0
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 81 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (571)
....+||||||+|++|+.+|+.|++ |.+|+|+|++....
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 3567999999999999999999999 99999999987543
No 161
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.24 E-value=0.00014 Score=78.16 Aligned_cols=41 Identities=32% Similarity=0.336 Sum_probs=37.4
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNP 84 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~ 84 (571)
..+|||||||+|..|+++|..|++ |+|||+||+...+.++.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 448999999999999999999999 99999999999887643
No 162
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.23 E-value=0.00014 Score=77.90 Aligned_cols=36 Identities=33% Similarity=0.516 Sum_probs=32.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC----CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (571)
+..+||||||||++|+++|..|++ |.+|+|||+...
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 357899999999999999999997 789999999753
No 163
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.23 E-value=0.00012 Score=76.67 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.2
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
+||+||||+|++|+.+|.+|++ |.+|+|+|+++..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4899999999999999999999 9999999998543
No 164
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.22 E-value=0.00018 Score=78.71 Aligned_cols=36 Identities=33% Similarity=0.479 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC--CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~ 79 (571)
..++||||||+|++|+++|..|++ |.+|+||||...
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 357999999999999999999998 899999999864
No 165
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.21 E-value=0.00012 Score=77.16 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=33.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.+||+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 46999999999999999999999 9999999998643
No 166
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.21 E-value=6.8e-05 Score=74.76 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=30.6
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
..+|+||||+|++|+.+|..|++ |.+|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 46999999999999999999999 999999998
No 167
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.20 E-value=0.00013 Score=76.29 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=31.7
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 46999999999999999999999 99999999953
No 168
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.18 E-value=0.00016 Score=72.49 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=31.8
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
+||||||+|.+|+.+|..|++ |.+|+|+|+....
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 699999999999999999999 9999999998643
No 169
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.18 E-value=0.00013 Score=76.25 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=31.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
+||+||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6899999999999999999999 9999999998
No 170
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.15 E-value=0.00021 Score=79.44 Aligned_cols=39 Identities=33% Similarity=0.366 Sum_probs=34.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
...+||||||+|++|+++|..|++ |.+|+|||++....+
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 457999999999999999999999 999999999876543
No 171
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.09 E-value=0.00023 Score=73.04 Aligned_cols=32 Identities=34% Similarity=0.459 Sum_probs=30.0
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.|+|||+|++|+++|..|++ |.+|+|+||...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 59999999999999999999 999999999754
No 172
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.08 E-value=0.00022 Score=75.01 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=33.2
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSPYG 82 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~~~ 82 (571)
..+|++|||+|++|+++|++|++ |. +|+|+|++....+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 46899999999999999999999 98 8999999876554
No 173
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.07 E-value=0.00039 Score=72.59 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=33.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
...+||+|||||++|+.+|..|++ |.+|+|+|+.+..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 457899999999999999999999 9999999998754
No 174
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.05 E-value=0.00035 Score=74.91 Aligned_cols=36 Identities=33% Similarity=0.447 Sum_probs=32.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcC----CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (571)
+..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 357999999999999999999997 589999999754
No 175
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.03 E-value=0.00024 Score=75.77 Aligned_cols=36 Identities=33% Similarity=0.483 Sum_probs=31.9
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-------------CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-------------NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-------------g~~VlvlE~G~~ 79 (571)
+..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 5 KPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp SCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 357899999999999999999986 689999999653
No 176
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.01 E-value=0.00034 Score=71.31 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=30.3
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-C--CeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~ 78 (571)
...||+||||+|++|+.+|.+|++ | .+|+|+|+..
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 346999999999999999999999 7 5699999875
No 177
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.99 E-value=0.00027 Score=74.68 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=31.0
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC--CCeEEEEec
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLER 76 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~ 76 (571)
|..+||+||||+|++|+.+|.+|++ |.+|+|+|+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 3457999999999999999999998 999999993
No 178
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.95 E-value=0.00037 Score=73.58 Aligned_cols=31 Identities=23% Similarity=0.502 Sum_probs=29.6
Q ss_pred CCccEEEECCCcchHHHHHhhcC--CCeEEEEe
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLE 75 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE 75 (571)
.+||+||||+|++|+.+|.+|++ |.+|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 46999999999999999999998 99999999
No 179
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.95 E-value=0.0003 Score=76.30 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=31.8
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
...||+||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 457999999999999999999999 9999999984
No 180
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.95 E-value=0.00037 Score=70.99 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
.||||||+|++|+++|..|++ |.+|+|||+....
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 389999999999999999997 7999999998643
No 181
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.95 E-value=0.00044 Score=72.98 Aligned_cols=34 Identities=12% Similarity=0.323 Sum_probs=32.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-C---CeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-N---ASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g---~~VlvlE~G~~ 79 (571)
++|+||||+|++|+.+|.+|++ | .+|+|+|+...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 5999999999999999999999 8 99999999874
No 182
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.94 E-value=0.00039 Score=72.09 Aligned_cols=59 Identities=15% Similarity=0.263 Sum_probs=43.6
Q ss_pred hhcCCCCcEEEcCcEEEEEEe--cCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 219 EYANPSGLTLLLHASVHKVLF--RIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~--~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
..+++.|+++++++.|++|.. +++ ++.+|.+. +|+. + .++.||+|+|..-...+|..+|
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~--~G~~--i-----~~D~Vv~a~G~~p~~~l~~~~g 259 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCE--DGTR--L-----PADLVIAGIGLIPNCELASAAG 259 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTC-----CEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTT
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCCcCcchhhccC
Confidence 345567999999999999986 333 66677664 5643 3 3799999999876667777666
No 183
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.90 E-value=0.00028 Score=74.94 Aligned_cols=34 Identities=38% Similarity=0.554 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhcC----CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (571)
.+||||||||++|+++|..|++ |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 4799999999999999999997 689999999754
No 184
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.88 E-value=0.00092 Score=73.48 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=34.4
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 81 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (571)
...+||||||+|++|+.+|..|++ |.+|+|+|+.+...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 457899999999999999999999 99999999987543
No 185
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.79 E-value=0.00078 Score=73.86 Aligned_cols=39 Identities=33% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
...+||+|||+|++|+++|+.|++ |.+|+|+|+.+...+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 457899999999999999999999 999999999876543
No 186
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.78 E-value=0.00051 Score=72.73 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=30.6
Q ss_pred CccEEEECCCcchHHHHHhhcC----CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~ 78 (571)
+|||||||+|++|+.+|.+|++ |.+|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999987 67999999986
No 187
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.78 E-value=0.00065 Score=71.76 Aligned_cols=38 Identities=29% Similarity=0.459 Sum_probs=33.3
Q ss_pred CCCCccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 43 PVSYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
++..+|+||||+|++|+.+|..|.+ +.+|+|||+....
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 3568999999999999999998876 7899999998653
No 188
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.77 E-value=0.00065 Score=68.79 Aligned_cols=34 Identities=32% Similarity=0.522 Sum_probs=30.8
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
--|+||||+|++|+.+|.+|++ | +|+|+|+....
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 3589999999999999999999 9 99999998753
No 189
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.75 E-value=0.00097 Score=73.95 Aligned_cols=38 Identities=21% Similarity=0.258 Sum_probs=34.4
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 81 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (571)
...+||+|||+|++|+.+|..|++ |.+|+|+|+.....
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~G 425 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIG 425 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcC
Confidence 457899999999999999999999 99999999987543
No 190
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.73 E-value=0.00053 Score=75.16 Aligned_cols=35 Identities=34% Similarity=0.616 Sum_probs=31.9
Q ss_pred CCccEEEECCCcchHHHHHhhcC------CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ------NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~------g~~VlvlE~G~~ 79 (571)
.++||+|||+|++|+++|..|++ |.+|+|||+...
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 36899999999999999999997 899999999753
No 191
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.70 E-value=0.00086 Score=69.91 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=32.0
Q ss_pred CccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
.+|+||||+|++|+.+|.+|++ +.+|+|+|+....
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 5799999999999999999998 5799999999754
No 192
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.67 E-value=0.00097 Score=68.57 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=32.4
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CC--eEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~~~ 80 (571)
..+|+||||+|++|+.+|.+|++ |. +|+|+|+....
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46899999999999999999999 86 59999998753
No 193
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.65 E-value=0.00082 Score=70.11 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhcC---CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (571)
+|+||||+|++|+.+|.+|++ |.+|+|+|+...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 699999999999999999998 789999999874
No 194
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.61 E-value=0.0012 Score=73.76 Aligned_cols=39 Identities=33% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 82 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (571)
...+||+|||+|++|+++|+.|++ |.+|+|+|+.....+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 457899999999999999999999 999999999876654
No 195
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.60 E-value=0.00095 Score=70.07 Aligned_cols=58 Identities=14% Similarity=0.060 Sum_probs=42.6
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
..+++.|++++++++|++|..+++ +++ |.+. +|+ ++ .++.||+|+|..-++.|+..+|
T Consensus 210 ~~l~~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 267 (472)
T 3iwa_A 210 HDLEKNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKR--TL-----DADLVILAAGVSPNTQLARDAG 267 (472)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSC--EE-----ECSEEEECSCEEECCHHHHHHT
T ss_pred HHHHhcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCC--EE-----EcCEEEECCCCCcCHHHHHhCC
Confidence 355668999999999999987554 544 5554 564 33 3799999999876667776666
No 196
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.59 E-value=0.012 Score=62.36 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 248 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 248 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCc
Confidence 579999999999999999999 999999998863
No 197
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.55 E-value=0.0011 Score=69.11 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=31.8
Q ss_pred ccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSPY 81 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~~ 81 (571)
.|+||||+|++|+.+|.+|++ |.+|+|+|++....
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 599999999999999999998 68999999998643
No 198
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.53 E-value=0.016 Score=58.10 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=43.0
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 223 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 223 ~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
+.|++++++++|++|..+++ ++.+|.+...+|+..++. ++.||+|+|.--.+.+|..++
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTVE-----ADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HTSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEEE-----CSEEEECCCBCCSCGGGGGSS
T ss_pred cCceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEEe-----CCEEEECCCCCCCHHHHHhhc
Confidence 35889999999999987655 788888864466545553 799999999655555554443
No 199
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.52 E-value=0.011 Score=59.93 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ 179 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 479999999999999999999 999999998853
No 200
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.51 E-value=0.00095 Score=76.30 Aligned_cols=62 Identities=15% Similarity=0.094 Sum_probs=45.1
Q ss_pred hcCCCCcEEEcCcEEEEEEec-CCCCCCCeEEEEEEEe--C---CCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 220 YANPSGLTLLLHASVHKVLFR-IKGKARPVAHGVVFRD--A---TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 220 ~~~~~g~~i~~~~~V~~i~~~-~~~~~~~~~~gV~~~~--~---~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
.+++.|++|++++.|++|..+ ++ ++.+|.+.+ . +|+..++. ++.||+|+|-.-+..++...+
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~-----~v~~v~~~~~~~~~~~G~~~~i~-----~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENG-----ELSAIVVAELDEARELGGTQRFE-----ADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTS-----CEEEEEEEEECTTCCEEEEEEEE-----CSEEEEECCEEECCHHHHHTT
T ss_pred HHHhCCeEEEeCCEeEEEeccCCC-----CEEEEEEEeccccCCCCceEEEE-----cCEEEECCCcCcChHHHHhCC
Confidence 345679999999999999874 33 788888875 2 24334453 789999999776667776553
No 201
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.44 E-value=0.016 Score=56.95 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=41.3
Q ss_pred CCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-C-CceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 222 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-T-GAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 222 ~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~-g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
++.|+++++++.|++|..+++ ++.+|.+.+. + |+..++. ++.||+|+|.-.++.+|
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i~-----~D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESLD-----VAGLFVAIGHSPNTAIF 252 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEEE-----CSEEEECSCEEESCGGG
T ss_pred ccCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEEE-----cCEEEEEeCCCCChHHh
Confidence 346899999999999987655 7888988752 2 5444553 78999999976555544
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.40 E-value=0.0015 Score=68.80 Aligned_cols=35 Identities=40% Similarity=0.642 Sum_probs=31.4
Q ss_pred CccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
.+|+||||+|++|+.+|.+|++ |.+|+|||+....
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4699999999999999999998 7899999998754
No 203
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.40 E-value=0.0015 Score=67.98 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
+|+||||+|++|+.+|.+|++ |.+|+|+|+....
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 489999999999999999998 7899999998753
No 204
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.38 E-value=0.0017 Score=70.27 Aligned_cols=37 Identities=24% Similarity=0.490 Sum_probs=33.1
Q ss_pred CCCccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
+...||||||+|++|+.+|.+|++ |.+|+|+|+....
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 346799999999999999999998 6899999999764
No 205
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.37 E-value=0.0017 Score=67.73 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=32.3
Q ss_pred CCccEEEECCCcchHHHHHhhcC--------CCeEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ--------NASVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--------g~~VlvlE~G~~~ 80 (571)
..+|++|||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 36899999999999999999987 8999999998654
No 206
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.36 E-value=0.017 Score=56.42 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=40.8
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 224 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 224 ~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
.|++++++++|++|..+++ ++.+|++.+ .+|+..++. ++.||+|+|...++.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNIE-----LAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEEE-----cCEEEEeeCCccCchHH
Confidence 5899999999999986654 788899886 346555553 79999999976555544
No 207
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.36 E-value=0.0018 Score=67.53 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=32.9
Q ss_pred CCccEEEECCCcchHHHHHhhcC-C--CeEEEEecCCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSPY 81 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~~~~ 81 (571)
..+|+||||+|++|+.+|..|++ | .+|+|+|+.+...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 46899999999999999999999 8 9999999987543
No 208
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.35 E-value=0.0083 Score=59.02 Aligned_cols=57 Identities=19% Similarity=0.344 Sum_probs=42.2
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHHHhh
Q 008281 224 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 290 (571)
Q Consensus 224 ~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~S 290 (571)
.|++++++++|++|..+++ ++.+|.+.+ .+|+..++ .++.||+|+|...++.+|..+
T Consensus 203 ~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~ 260 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLI-----ETDGVFIYVGLIPQTSFLKDS 260 (319)
T ss_dssp TTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----CCSEEEECCCEEECCGGGTTS
T ss_pred CCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEE-----ecCEEEEeeCCccChHHHhhc
Confidence 4788999999999987644 688888874 25654455 479999999976666666543
No 209
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.27 E-value=0.0015 Score=68.84 Aligned_cols=37 Identities=41% Similarity=0.438 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhcCCCeEEEEecCCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPY 81 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~~~ 81 (571)
..+||||||+|++|+.+|.+|++..+|+|||++....
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~G 143 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLG 143 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCC
Confidence 3579999999999999999998778999999987653
No 210
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.24 E-value=0.0021 Score=73.94 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=32.8
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~ 80 (571)
..+||+|||||++|+.+|.+|++ |. +|+|+|+....
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 47899999999999999999999 98 79999998654
No 211
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.19 E-value=0.0022 Score=66.40 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
.|+||||+|++|+.+|.+|++ |.+|+|||+....
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 689999999999999999998 5899999998754
No 212
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.17 E-value=0.0027 Score=65.79 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=31.4
Q ss_pred CccEEEECCCcchHHHHHhhcC----CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~~ 80 (571)
..|+||||+|++|+.+|..|++ |.+|+|||+....
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4689999999999999999987 6899999998753
No 213
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.07 E-value=0.021 Score=58.96 Aligned_cols=33 Identities=36% Similarity=0.547 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 469999999999999999999 999999998753
No 214
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.04 E-value=0.0026 Score=65.31 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.5
Q ss_pred ccEEEECCCcchHHHHHhhcC----CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~~ 80 (571)
.||||||+|++|+.+|.+|++ |.+|+|||+....
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 379999999999999999987 6899999998743
No 215
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.03 E-value=0.022 Score=59.37 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 469999999999999999999 999999998853
No 216
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.00 E-value=0.016 Score=60.35 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|.+|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 469999999999999999999 999999998853
No 217
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.86 E-value=0.04 Score=53.70 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=42.0
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHHHhh
Q 008281 223 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 290 (571)
Q Consensus 223 ~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~S 290 (571)
+.|+++++++.|++|..+++ ++.+|.+.+ .+|+..++. ++.||+|+|..-+..+|..+
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKRELV-----VPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp CTTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECSCEEECCGGGBCT
T ss_pred CCCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEEe-----cCEEEEEecCccChhhhhcc
Confidence 35899999999999987654 777888874 256544554 78999999976555555433
No 218
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.85 E-value=0.035 Score=57.91 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=29.6
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 368999999999999999999 999999998853
No 219
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.85 E-value=0.0029 Score=69.05 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=32.7
Q ss_pred CCccEEEECCCcchHHHHHhhcC-C--------CeEEEEecCC-CC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-N--------ASVLLLERGG-SP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g--------~~VlvlE~G~-~~ 80 (571)
...+|+|||+|++|+++|++|++ | .+|+|+|+.+ ..
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 35799999999999999999999 8 9999999987 54
No 220
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.78 E-value=0.0044 Score=66.56 Aligned_cols=34 Identities=32% Similarity=0.537 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhcC---CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (571)
.||+|||+|++|+.+|.+|++ +.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 379999999999999999998 5799999999764
No 221
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.76 E-value=0.052 Score=53.51 Aligned_cols=58 Identities=16% Similarity=0.066 Sum_probs=40.9
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 223 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 223 ~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
+.|+++++++.|++|..+ + ++.+|.+.+. +|+..++. ++.||+|+|.--...+|..++
T Consensus 203 ~~gv~v~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 203 EGRLEVLTPYELRRVEGD-E-----RVRWAVVFHNQTQEELALE-----VDAVLILAGYITKLGPLANWG 261 (335)
T ss_dssp TTSSEEETTEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEEECGGGGGSC
T ss_pred cCCeEEecCCcceeEccC-C-----CeeEEEEEECCCCceEEEe-----cCEEEEeecCCCCchHhhhcc
Confidence 458899999999999873 3 6677887643 56544553 799999999765545554443
No 222
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.73 E-value=0.047 Score=57.33 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=29.2
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 68999999999999999999 999999998853
No 223
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.71 E-value=0.0059 Score=63.28 Aligned_cols=33 Identities=12% Similarity=0.459 Sum_probs=29.3
Q ss_pred cEEEECCCcchHHHHHhhcC-C--CeEEEEecCCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSP 80 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~~~ 80 (571)
-|||||+|++|+.+|.+|++ | .+|+|+|+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 38999999999999999998 6 579999998653
No 224
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.69 E-value=0.04 Score=57.92 Aligned_cols=33 Identities=30% Similarity=0.461 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 369999999999999999999 999999998864
No 225
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.67 E-value=0.061 Score=55.82 Aligned_cols=32 Identities=31% Similarity=0.604 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 579999999999999999999 99999999885
No 226
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.62 E-value=0.008 Score=63.41 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=32.2
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.+...|||||||++|+.+|.+|.+ +.+|+|||+.+.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 345679999999999999999999 999999999764
No 227
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.58 E-value=0.0058 Score=62.43 Aligned_cols=33 Identities=27% Similarity=0.507 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhcC-C--CeEEEEecCCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSP 80 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~~~ 80 (571)
.|||||+|++|+++|.+|.+ + .+|+|||+....
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~ 39 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETY 39 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSE
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCC
Confidence 38999999999999999987 4 699999998653
No 228
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.50 E-value=0.073 Score=52.27 Aligned_cols=54 Identities=13% Similarity=0.275 Sum_probs=39.6
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 223 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 223 ~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
+.|++++++++|++|..+ + ++.+|.+.+ .+|+..++. ++.||+|+|...+..+|
T Consensus 200 ~~gv~i~~~~~v~~i~~~-~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGA-D-----SVSGVKLRNLKTGEVSELA-----TDGVFIFIGHVPNTAFV 254 (325)
T ss_dssp CTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred cCCceEecCCceEEEccC-C-----cEEEEEEEECCCCcEEEEE-----cCEEEEccCCCCChHHH
Confidence 358999999999999864 3 677888875 356555554 79999999965544444
No 229
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.46 E-value=0.043 Score=57.38 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 469999999999999999999 999999999853
No 230
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.43 E-value=0.024 Score=59.36 Aligned_cols=32 Identities=25% Similarity=0.494 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 68999999999999999999 999999998853
No 231
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.43 E-value=0.071 Score=55.48 Aligned_cols=31 Identities=29% Similarity=0.387 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 69999999999999999999 99999999875
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.32 E-value=0.031 Score=58.56 Aligned_cols=33 Identities=36% Similarity=0.581 Sum_probs=30.4
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 4579999999999999999999 99999999885
No 233
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.31 E-value=0.085 Score=55.07 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=29.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 369999999999999999999 999999998853
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.23 E-value=0.046 Score=56.73 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=29.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 369999999999999999999 999999998753
No 235
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.14 E-value=0.11 Score=54.19 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=29.7
Q ss_pred ccEEEECCCcchHHHHHhhcC--CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~ 194 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQ 194 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCc
Confidence 479999999999999999988 899999998853
No 236
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.13 E-value=0.072 Score=55.61 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=29.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 369999999999999999999 999999998853
No 237
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.11 E-value=0.053 Score=56.45 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=30.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 369999999999999999999 999999998853
No 238
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.05 E-value=0.06 Score=55.81 Aligned_cols=33 Identities=33% Similarity=0.415 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 369999999999999999999 999999998853
No 239
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.98 E-value=0.042 Score=57.82 Aligned_cols=33 Identities=15% Similarity=0.400 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 368899999999999999988 889999988753
No 240
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.97 E-value=0.044 Score=57.18 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=29.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 469999999999999999999 999999998853
No 241
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.95 E-value=0.11 Score=55.39 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 69999999999999999999 999999999853
No 242
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.84 E-value=0.1 Score=54.88 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 210 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred eEEEECChHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 68999999999999999999 999999998753
No 243
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.80 E-value=0.099 Score=54.24 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=30.4
Q ss_pred CccEEEECCCcchHHHHHhhcC---CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (571)
.-.|+|||+|..|+-+|..|++ +.+|.++++...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 4579999999999999999998 679999999864
No 244
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.79 E-value=0.013 Score=60.44 Aligned_cols=56 Identities=13% Similarity=0.251 Sum_probs=40.8
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 220 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 220 ~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
..++.|+++++++.|++|. ++ ++.+.+.+|...++. ++.||+++|.- .+.++..++
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i~-----~d~vi~~~G~~-~~~~~~~~~ 264 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEVP-----AKFTMFMPSFQ-GPEVVASAG 264 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEEE-----CSEEEEECEEE-CCHHHHTTC
T ss_pred HHHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEee-----cceEEEeccCC-CchHHHhcc
Confidence 4466799999999999984 23 355666677666664 79999999954 456676665
No 245
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.70 E-value=0.077 Score=55.52 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 469999999999999999999 999999998853
No 246
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.68 E-value=0.11 Score=54.38 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=37.6
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCC-CceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 223 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 223 ~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~-g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
+.|++|++++.|++|..++++ ++ .|.+.+.. |+..++. ++.||+|+|..-...+|
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~~----~~-~v~~~~~~~~~~~~~~-----~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEKQDDG----KL-LVKYKNVETGEESEDV-----YDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HTTCCEEETEEEEEEEECTTS----CE-EEEEEETTTCCEEEEE-----ESEEEECSCEEECCGGG
T ss_pred hCCCEEEeCCEEEEEEEcCCC----cE-EEEEecCCCCceeEEE-----cCEEEECcccccCcCcC
Confidence 458889999999999876542 33 46666532 4444443 79999999976555554
No 247
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.63 E-value=0.097 Score=56.27 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 369999999999999999999 999999998753
No 248
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.53 E-value=0.13 Score=53.79 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=26.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|||+|..|+-+|..|++ |.+|.++|+.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 58999999999999999998 9999999875
No 249
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.48 E-value=0.085 Score=55.21 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=29.5
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 378999999999999999999 999999998853
No 250
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.38 E-value=0.24 Score=51.64 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 368999999999999999999 999999998753
No 251
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.19 E-value=0.12 Score=53.55 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLEN 181 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCc
Confidence 369999999999999999999 999999998853
No 252
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.00 E-value=0.15 Score=49.85 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=40.4
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe-CCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 224 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 224 ~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
.|+++++++.|++|..++ ...+|.+.+ .+|+..++. ++.||+|+|..-++.+|..++
T Consensus 202 ~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~~ 259 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEILE-----IDDLIVNYGFVSSLGPIKNWG 259 (332)
T ss_dssp SSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEEE-----CSEEEECCCEECCCGGGGGSS
T ss_pred CCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEEE-----CCEEEEeeccCCCchHHhhcC
Confidence 478899999999997643 345677775 344444553 799999999777666665554
No 253
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.94 E-value=0.085 Score=54.85 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 468999999999999999999 99999999875
No 254
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=93.14 E-value=0.5 Score=49.81 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=26.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 48999999999999999998 8999999874
No 255
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=92.99 E-value=0.43 Score=50.53 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|||+|..|+=+|.-++. |.+|.|+++.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 59999999999999999999 9999999875
No 256
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.94 E-value=0.31 Score=50.96 Aligned_cols=56 Identities=27% Similarity=0.379 Sum_probs=36.9
Q ss_pred CCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHH-H-HHhhc
Q 008281 222 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ-L-LMLSG 291 (571)
Q Consensus 222 ~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~-L-Ll~Sg 291 (571)
++.|++|++++.|++|..+++ ....|.+ .+|+ ++. ++.||+|+|..-... | |..+|
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~--~i~-----~D~vv~a~G~~p~~~~L~l~~~g 299 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNAD-----GTRHVVF--ESGA--EAD-----YDVVMLAIGRVPRSQTLQLEKAG 299 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTT-----SCEEEEE--TTSC--EEE-----ESEEEECSCEEESCTTSCGGGGT
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----CEEEEEE--CCCc--EEE-----cCEEEEccCCCcCccccCchhcC
Confidence 346899999999999987654 2234444 3564 332 699999999765544 3 34444
No 257
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.77 E-value=0.43 Score=49.95 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=39.9
Q ss_pred CCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 222 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 222 ~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
++.|+++++++.|++|..+++ ++ .|.+ .+|+. + .++.||+|+|..-++.++..+|
T Consensus 237 ~~~GV~v~~~~~V~~i~~~~~-----~~-~v~l--~dG~~--i-----~aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 237 RREGVKVMPNAIVQSVGVSSG-----KL-LIKL--KDGRK--V-----ETDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp HTTTCEEECSCCEEEEEEETT-----EE-EEEE--TTSCE--E-----EESEEEECCCEEECCTTHHHHT
T ss_pred HhcCCEEEeCCEEEEEEecCC-----eE-EEEE--CCCCE--E-----ECCEEEECCCCCccHHHHHHcC
Confidence 346899999999999986544 43 3444 36643 3 3699999999877777777776
No 258
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.76 E-value=0.36 Score=50.54 Aligned_cols=50 Identities=14% Similarity=0.324 Sum_probs=34.7
Q ss_pred CCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHH
Q 008281 222 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 285 (571)
Q Consensus 222 ~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~ 285 (571)
++.|+++++++.|++|..+++ ....|.+ .+|+ ++ .++.||+|+|..-+..
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~--~i-----~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTD-----GSKHVTF--ESGK--TL-----DVDVVMMAIGRIPRTN 295 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTT-----SCEEEEE--TTSC--EE-----EESEEEECSCEEECCG
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----ceEEEEE--CCCc--EE-----EcCEEEECCCCccccc
Confidence 346899999999999987654 2234544 3564 33 3699999999765554
No 259
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.37 E-value=0.45 Score=49.92 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=26.8
Q ss_pred cEEEECCCcchHHHHHhhcC-C--------------CeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N--------------ASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g--------------~~VlvlE~G~~ 79 (571)
.++|||+|+.|+-+|..|++ + .+|.|+|+++.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~ 265 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 265 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc
Confidence 59999999999999998875 2 57888888854
No 260
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.24 E-value=0.39 Score=54.70 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 69999999999999999999 99999999875
No 261
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=91.97 E-value=0.085 Score=54.58 Aligned_cols=35 Identities=17% Similarity=0.324 Sum_probs=32.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
...+++|||+|++|+-+|..|++ |.+|.|+|+++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 35789999999999999999999 999999999864
No 262
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=91.94 E-value=0.11 Score=50.75 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=30.6
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 69999999999999999999 9999999998653
No 263
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.34 E-value=0.16 Score=43.03 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=29.5
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.++|||.|..|..+|..|.+ |.+|+++|+..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 359999999999999999999 99999999864
No 264
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.01 E-value=0.12 Score=43.74 Aligned_cols=30 Identities=33% Similarity=0.649 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|+|+|..|..+|..|.+ |.+|+++|+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 59999999999999999999 9999999975
No 265
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=90.97 E-value=0.12 Score=52.34 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=30.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 69999999999999999999 9999999999754
No 266
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.91 E-value=0.13 Score=44.43 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=29.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.-.++|||+|..|..+|..|.+ |.+|+++++..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3469999999999999999999 99999999864
No 267
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.70 E-value=0.57 Score=53.77 Aligned_cols=31 Identities=29% Similarity=0.464 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
.|+|||+|..|+-+|..|.+ |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999999 85 899999874
No 268
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.53 E-value=0.15 Score=42.76 Aligned_cols=30 Identities=33% Similarity=0.513 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|||+|..|..+|..|.+ |.+|.++++.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 59999999999999999999 9999999975
No 269
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.06 E-value=0.16 Score=52.75 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 369999999999999999999 9999999998653
No 270
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=90.03 E-value=0.2 Score=48.64 Aligned_cols=33 Identities=27% Similarity=0.506 Sum_probs=30.4
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 469999999999999999999 999999998754
No 271
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.99 E-value=0.73 Score=50.45 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=29.3
Q ss_pred cEEEEC--CCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIG--GGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVG--sG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.++||| +|..|+-+|..|++ |.+|.++|+.+.
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 599999 99999999999999 999999998753
No 272
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.94 E-value=0.21 Score=43.00 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|+|+|..|..+|..|.+ |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 59999999999999999999 9999999985
No 273
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.35 E-value=0.17 Score=50.70 Aligned_cols=34 Identities=41% Similarity=0.561 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 469999999999999999999 9999999998643
No 274
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=87.55 E-value=0.32 Score=49.55 Aligned_cols=35 Identities=34% Similarity=0.431 Sum_probs=31.5
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 3479999999999999999999 9999999998653
No 275
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.44 E-value=0.31 Score=39.40 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhcC-C-CeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~ 78 (571)
.++|+|+|..|..+|..|.+ | .+|.++++..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 59999999999999999999 8 8999998853
No 276
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=87.10 E-value=0.37 Score=49.65 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=30.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCe-EEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NAS-VLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~-VlvlE~G~~ 79 (571)
-.|+|||+|.+|+-+|..|++ +.+ |.|++++..
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 469999999999999999999 888 999999853
No 277
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.92 E-value=0.29 Score=41.17 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|+|+|..|..+|..|.+ |.+|.++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 49999999999999999999 9999999875
No 278
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=86.83 E-value=0.36 Score=50.46 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 469999999999999999999 9999999998643
No 279
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=86.46 E-value=0.34 Score=48.22 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 69999999999999999999 999999999864
No 280
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=86.25 E-value=0.44 Score=49.39 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=30.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.|+|||+|.+|+-+|..|++ |.+|.|+++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 369999999999999999999 999999998754
No 281
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=86.16 E-value=0.43 Score=49.08 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=30.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.++|||+|..|+-+|..|++ |.+|.|+|++...
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 69999999999999999999 9999999998754
No 282
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=85.85 E-value=0.54 Score=49.80 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=31.4
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 3479999999999999999999 999999999975
No 283
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.72 E-value=0.51 Score=50.05 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=31.4
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+..
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 469999999999999999999 9999999999753
No 284
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=84.97 E-value=0.51 Score=48.61 Aligned_cols=33 Identities=30% Similarity=0.588 Sum_probs=30.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 79999999999999999999 9999999998753
No 285
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=84.89 E-value=0.62 Score=45.55 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=40.5
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeC-CCceeEEeeecCCCeeEEEecCCcCcHHHH
Q 008281 223 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLL 287 (571)
Q Consensus 223 ~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~a~~~VVLaAGai~tp~LL 287 (571)
+.|+++++++.|++|..++++ .++.+|.+.+. +|+..++. ++.||+|+|..-+..+|
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDLK-----VSGLFFAIGHEPATKFL 264 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEEe-----cCEEEEEeCCccchHHh
Confidence 458999999999999865431 25677888753 46545553 79999999976555544
No 286
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.75 E-value=0.39 Score=44.03 Aligned_cols=30 Identities=30% Similarity=0.490 Sum_probs=28.0
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++|||+|..|..+|..|.+ |.+|+++|+..
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999999 99999999753
No 287
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=84.38 E-value=0.68 Score=45.40 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=30.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.++|||+|..|+-+|..|++ |.+|.++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 469999999999999999999 999999998854
No 288
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.22 E-value=0.55 Score=47.73 Aligned_cols=34 Identities=38% Similarity=0.670 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 469999999999999999999 9999999998653
No 289
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=83.78 E-value=0.86 Score=46.99 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=43.5
Q ss_pred EcCCCceecHHHhhhhcCCCCcEEEcCcEEEEEEec--CCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCc
Q 008281 205 FDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFR--IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 281 (571)
Q Consensus 205 ~~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~--~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai 281 (571)
++..|...-...+...+++.|.+|+++++|++|..+ ++ ++++|.. +|+. +. ++.||+|+|..
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~---~g~~--~~-----ad~VV~a~~~~ 299 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT---KLGT--FK-----APLVIADPTYF 299 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT-----EEEEEEE---TTEE--EE-----CSCEEECGGGC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC-----eEEEEEE---CCeE--EE-----CCEEEECCCcc
Confidence 345554433333555556679999999999999987 44 8888865 3532 33 78899999975
No 290
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=83.74 E-value=0.61 Score=49.50 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 469999999999999999999 999999999975
No 291
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=83.35 E-value=0.64 Score=48.14 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=30.8
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 368999999999999999999 9999999998643
No 292
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.17 E-value=0.7 Score=45.03 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=28.6
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||+|..|+.+|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999999 99999998864
No 293
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.85 E-value=0.67 Score=47.93 Aligned_cols=31 Identities=32% Similarity=0.651 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+||+|+|-.|..+|..|++ |.+|+|||+..
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999998 99999999874
No 294
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.80 E-value=0.68 Score=45.31 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||+|..|+.+|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999 99999998864
No 295
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.14 E-value=0.93 Score=44.17 Aligned_cols=35 Identities=29% Similarity=0.494 Sum_probs=31.4
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.-.++|||+|..|+-+|..|++ |.+|.+++++...
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 3469999999999999999999 9999999998653
No 296
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=81.63 E-value=0.9 Score=43.97 Aligned_cols=31 Identities=26% Similarity=0.519 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+.|||+|..|..+|..|++ |.+|+++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999998763
No 297
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=81.58 E-value=0.81 Score=47.38 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 369999999999999999999 9999999998653
No 298
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=81.52 E-value=0.73 Score=44.98 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-|.|||+|..|.-.|..++. |++|+|+|..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 49999999999999999999 9999999865
No 299
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.44 E-value=0.75 Score=49.37 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.++|||+|..|+-+|..|++ |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 69999999999999999999 9999999987
No 300
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.37 E-value=0.88 Score=46.24 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=31.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 469999999999999999999 9999999998754
No 301
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=81.21 E-value=0.93 Score=38.35 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 49999999999999999999 98899998753
No 302
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=81.18 E-value=1.9 Score=46.27 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=45.3
Q ss_pred EEEcCCCceecHHHhhhhcCCCCcEEEcCcEEEEEEecCC-CCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCC
Q 008281 203 TIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIK-GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 280 (571)
Q Consensus 203 ~~~~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~-~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGa 280 (571)
..++..|....+..+.+.+...|.+|++++.|.+|+.+++ + +++||.. .+|+. +. ++.||..+..
T Consensus 370 ~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g----~v~gV~~--~~Ge~--i~-----A~~VVs~~~~ 435 (650)
T 1vg0_A 370 FLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR----KCKAVID--QFGQR--II-----SKHFIIEDSY 435 (650)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC----CEEEEEE--TTSCE--EE-----CSEEEEEGGG
T ss_pred eEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC----eEEEEEe--CCCCE--EE-----cCEEEEChhh
Confidence 3445566544444466666778999999999999999763 3 8999873 46754 33 6778876553
No 303
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=80.91 E-value=0.89 Score=46.03 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 369999999999999999999 9999999998654
No 304
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.48 E-value=1.3 Score=42.17 Aligned_cols=33 Identities=12% Similarity=0.047 Sum_probs=29.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.-.++|||+|..|+-+|..|++ | +|.+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 3479999999999999999999 9 9999998854
No 305
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=80.45 E-value=0.81 Score=43.54 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=28.9
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.--++|||+|-.|...|..|.+ |.+|.|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3459999999999999999999 9999999864
No 306
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.14 E-value=1.1 Score=41.19 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=28.3
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
.--++|||+|..|...|..|.+ |.+|.|+..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 4569999999999999999999 999999975
No 307
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.81 E-value=1 Score=39.80 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=28.5
Q ss_pred ccEEEECCCcchHHHHHhhcC--CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~ 78 (571)
-.++|||.|..|..+|..|.+ |.+|+++|+..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 369999999999999999986 89999999863
No 308
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=79.74 E-value=0.78 Score=44.27 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||+|..|+.+|..|++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999999 99999999873
No 309
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=79.47 E-value=0.93 Score=46.43 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=43.1
Q ss_pred EcCCCceecHHHhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCc
Q 008281 205 FDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 281 (571)
Q Consensus 205 ~~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai 281 (571)
++..|...-...+...+++.|.+|+++++|++|..+++ ++++|.. +|+. +. ++.||+|+|..
T Consensus 228 ~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~~--~~-----ad~VV~a~~~~ 289 (433)
T 1d5t_A 228 YPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGEV--AR-----CKQLICDPSYV 289 (433)
T ss_dssp EETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTEE--EE-----CSEEEECGGGC
T ss_pred EeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCeE--EE-----CCEEEECCCCC
Confidence 44556333333344555567899999999999998765 8888763 4542 33 78999999975
No 310
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=79.31 E-value=1 Score=47.49 Aligned_cols=34 Identities=32% Similarity=0.389 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 379999999999999999999 9999999998653
No 311
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=79.07 E-value=2.2 Score=39.27 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=35.1
Q ss_pred hcCC-CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcC
Q 008281 220 YANP-SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 282 (571)
Q Consensus 220 ~~~~-~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~ 282 (571)
.+++ .|++++ +++|++|..+++ ++.+|.+. +|. ++. ++.||+|+|.+.
T Consensus 77 ~~~~~~gv~i~-~~~v~~i~~~~~-----~v~~v~~~--~g~--~i~-----a~~VV~A~G~~s 125 (232)
T 2cul_A 77 LLEGLRPLHLF-QATATGLLLEGN-----RVVGVRTW--EGP--PAR-----GEKVVLAVGSFL 125 (232)
T ss_dssp HHHTCTTEEEE-ECCEEEEEEETT-----EEEEEEET--TSC--CEE-----CSEEEECCTTCS
T ss_pred HHHcCCCcEEE-EeEEEEEEEeCC-----EEEEEEEC--CCC--EEE-----CCEEEECCCCCh
Confidence 4444 499999 679999998765 77777653 564 233 799999999853
No 312
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=78.88 E-value=1.1 Score=42.10 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=29.8
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (571)
...|+|||+|..|+.+|..|+. |. +|.|+++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4569999999999999999999 85 8999987653
No 313
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.52 E-value=1 Score=44.36 Aligned_cols=30 Identities=33% Similarity=0.554 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||+|..|+.+|..|++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999 9999999875
No 314
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=78.41 E-value=1.3 Score=40.15 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=29.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
..+.|||+|..|..+|..|++ |.+|.++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 359999999999999999999 99999998764
No 315
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=78.16 E-value=1.2 Score=42.43 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=28.0
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
+.|||+|..|..+|..|++ |.+|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 7899999999999999999 99999998864
No 316
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.96 E-value=1.3 Score=42.72 Aligned_cols=35 Identities=29% Similarity=0.344 Sum_probs=31.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
.-.++|||+|..|+-+|..|++ |.+|.+++++...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 3479999999999999999999 9999999998754
No 317
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=77.84 E-value=1.4 Score=42.14 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+.|||+|..|..+|..|+. |.+|.+.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 48999999999999999999 99999998763
No 318
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=77.61 E-value=1.2 Score=45.36 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=29.4
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.|||||.|-.|..+|..|.+ |.+|++||+..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 359999999999999999999 99999999874
No 319
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=76.20 E-value=2 Score=42.16 Aligned_cols=36 Identities=22% Similarity=0.562 Sum_probs=31.1
Q ss_pred CccEEEECCCcchHHHHHhhcC-C-CeEEEEecCCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPY 81 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~~ 81 (571)
..-|+|||+|..|+.+|..|+. | .++.|++......
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~ 71 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 71 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEecc
Confidence 5679999999999999999999 8 4899998876543
No 320
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=75.76 E-value=1.8 Score=41.62 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=30.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.++|||+|..|+-+|..|++ +.+|.+++++...
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 469999999999999999999 9999999998653
No 321
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=75.67 E-value=1.9 Score=42.17 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.++|||+|..|+-+|..|++ + +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 479999999999999999999 7 799999884
No 322
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=75.48 E-value=1.5 Score=42.45 Aligned_cols=30 Identities=30% Similarity=0.455 Sum_probs=27.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 48999999999999999999 9999999875
No 323
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=75.28 E-value=1.3 Score=41.01 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.++|+|.|..|..+|..|.+ |. |+++|+..
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 359999999999999999999 99 99999763
No 324
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=75.20 E-value=1.7 Score=42.39 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC--eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (571)
.-+.|||+|..|..+|..|++ |. +|.++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 359999999999999999999 87 999998863
No 325
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=75.08 E-value=1.6 Score=43.22 Aligned_cols=31 Identities=32% Similarity=0.462 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-.+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 359999999999999999999 9999999875
No 326
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=74.90 E-value=1.7 Score=43.37 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=31.0
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (571)
.+--|||+|+|.+|..+|.-|.. |. +|.++++.+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI 223 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 35679999999999999999999 97 9999998763
No 327
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=74.76 E-value=1.6 Score=42.65 Aligned_cols=28 Identities=29% Similarity=0.644 Sum_probs=26.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEE
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLL 74 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~Vlvl 74 (571)
..+.|||+|..|+.+|..|++ |.+|.++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 358999999999999999999 9999998
No 328
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=73.73 E-value=2.1 Score=41.69 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=28.8
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
.-+.|||+|..|..+|..|+. |. +|.++++..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 359999999999999999999 87 999998864
No 329
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=73.56 E-value=2.3 Score=38.48 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=27.0
Q ss_pred EEEEC-CCcchHHHHHhhcC-CCeEEEEecC
Q 008281 49 YIIIG-GGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 49 vIIVG-sG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
+.||| +|..|..+|..|++ |.+|.++++.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999 99999999999999 9999999875
No 330
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=72.74 E-value=1.9 Score=42.18 Aligned_cols=28 Identities=25% Similarity=0.433 Sum_probs=26.7
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
+.|||+|..|..+|..|++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999999 999999987
No 331
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=72.74 E-value=2.3 Score=43.94 Aligned_cols=53 Identities=23% Similarity=0.228 Sum_probs=36.2
Q ss_pred CCCcEEEcCcEEEEEEecCCCCCCC-eEEEEEEEeC-------------CCceeEEeeecCCCeeEEEecCCcCcH
Q 008281 223 PSGLTLLLHASVHKVLFRIKGKARP-VAHGVVFRDA-------------TGAKHRAYLKNGPKNEIIVSAGALGSP 284 (571)
Q Consensus 223 ~~g~~i~~~~~V~~i~~~~~~~~~~-~~~gV~~~~~-------------~g~~~~~~~~~~a~~~VVLaAGai~tp 284 (571)
+.|+++++++.+++|.-+++ . ++.+|.+.+. +|+..++ .++.||+|+|.-.++
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~----~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i-----~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPD----GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDL-----PCGLVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTT----SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEE-----ECSEEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCC----CceEEEEEEEEEEEccccCCCcccCCCceEEE-----EcCEEEECCCCCCCC
Confidence 36899999999999976532 2 5667776521 2433444 378999999976555
No 332
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=72.64 E-value=2.1 Score=42.66 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=31.1
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 80 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~ 80 (571)
.+--++|+|+|.+|..+|..|.. |. +|.|+++-+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli 228 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGIL 228 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEEC
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 35669999999999999999999 87 89999987543
No 333
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=72.64 E-value=1.8 Score=44.83 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=29.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
..-+.|||.|..|+.+|..|++ |.+|+++++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3458999999999999999999 9999999875
No 334
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=72.41 E-value=2.5 Score=41.89 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-.+.|||+|.-|..+|..|++ |.+|.+..+.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 469999999999999999999 9999999875
No 335
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=71.88 E-value=2 Score=42.00 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+.|||+|..|..+|..|++ |.+|.+.++..
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998763
No 336
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=71.83 E-value=1.9 Score=44.42 Aligned_cols=33 Identities=27% Similarity=0.347 Sum_probs=29.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 79 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (571)
-.|+|||+|..|+-+|..|.+ |. +|.++++...
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 469999999999999999888 76 6999998864
No 337
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=71.82 E-value=2.1 Score=43.14 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=29.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.--|+|||+|..|..+|..|.. |.+|+++++..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4569999999999999999988 99999998775
No 338
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=71.48 E-value=2.6 Score=40.86 Aligned_cols=31 Identities=35% Similarity=0.383 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhcCCCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQNASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (571)
.+.|||+|..|+.+|..|+.|.+|.++.|..
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 4899999999999999999778999998874
No 339
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=71.35 E-value=2.4 Score=43.83 Aligned_cols=31 Identities=26% Similarity=0.369 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||+|..|..+|..|+. |.+|+++++..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999998763
No 340
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=71.08 E-value=2.2 Score=42.59 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=29.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.--|+|||+|..|..+|..|.. |.+|+++++..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4569999999999999999998 99999998774
No 341
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=71.06 E-value=2.4 Score=43.35 Aligned_cols=29 Identities=28% Similarity=0.303 Sum_probs=27.2
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
+.|||.|..|+.+|..|++ |.+|+++++.
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 7899999999999999999 9999999875
No 342
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=70.13 E-value=2.4 Score=40.21 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-++|+|+|..|..+|..|++ |.+|.+..|.
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 59999999999999999999 9999998765
No 343
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=70.06 E-value=2.5 Score=41.51 Aligned_cols=32 Identities=25% Similarity=0.497 Sum_probs=28.9
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
+..+.|||+|..|+.+|..|++ |.+|.++.|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4459999999999999999999 9999999875
No 344
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=69.89 E-value=2.4 Score=43.73 Aligned_cols=31 Identities=32% Similarity=0.335 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
--++|+|+|..|..+|.+|+. |.+|++.|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 348999999999999999999 9999999764
No 345
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=69.82 E-value=2.4 Score=46.63 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=29.8
Q ss_pred ccEEEEC--CCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIG--GGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVG--sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.|+||| +|..|+-+|..|++ |.+|.|+|+++
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 3699998 99999999999999 99999999986
No 346
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=69.79 E-value=2.6 Score=38.43 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 59999999999999999999 9999999875
No 347
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=69.79 E-value=5.3 Score=41.36 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=34.0
Q ss_pred hhhhcCCCC-cEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCC
Q 008281 217 LLEYANPSG-LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 280 (571)
Q Consensus 217 ~l~~~~~~g-~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGa 280 (571)
+...+...| ++|+++++|++|..+++ . |.+...+|+. +. ++.||+|+|.
T Consensus 261 l~~~l~~~g~~~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~~-----ad~vI~a~~~ 310 (495)
T 2vvm_A 261 FWEEAAGTGRLGYVFGCPVRSVVNERD-----A---ARVTARDGRE--FV-----AKRVVCTIPL 310 (495)
T ss_dssp HHHHHHTTTCEEEESSCCEEEEEECSS-----S---EEEEETTCCE--EE-----EEEEEECCCG
T ss_pred HHHHhhhcCceEEEeCCEEEEEEEcCC-----E---EEEEECCCCE--EE-----cCEEEECCCH
Confidence 444444556 99999999999987655 3 3344346643 32 6999999995
No 348
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=69.63 E-value=3.3 Score=40.60 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=28.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
.-+.|||+|..|..+|..|+. |. +|.|++.-.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 469999999999999999999 87 999998764
No 349
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=69.52 E-value=2.5 Score=40.90 Aligned_cols=29 Identities=24% Similarity=0.425 Sum_probs=26.8
Q ss_pred EEEECCCcchHHHHHhhcC-CC--eEEEEecC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 77 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (571)
+.|||+|..|..+|..|+. |. .|.+++..
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 7899999999999999999 87 89999875
No 350
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=69.30 E-value=3.6 Score=42.20 Aligned_cols=32 Identities=31% Similarity=0.476 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--+.|||+|..|..+|..|++ |.+|++.++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 359999999999999999999 99999998764
No 351
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=69.23 E-value=3.9 Score=43.21 Aligned_cols=35 Identities=20% Similarity=0.510 Sum_probs=30.3
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~ 80 (571)
...|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 4569999999999999999999 85 89999877543
No 352
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=68.93 E-value=4.4 Score=38.89 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=30.1
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
.-.+.|||.|..|..+|..|++ |.+|.+.++...
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3469999999999999999999 999999987653
No 353
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=68.88 E-value=2.7 Score=41.93 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--++|+|+|..|..+|..|.. |.+|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 459999999999999999998 99999998753
No 354
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=68.86 E-value=3.3 Score=38.77 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=29.5
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (571)
...|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4579999999999999999999 85 8889887653
No 355
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=68.64 E-value=2.6 Score=43.35 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=28.5
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||.|..|+.+|..|++ |.+|.++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48999999999999999999 99999998763
No 356
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=68.54 E-value=2.8 Score=40.22 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=30.4
Q ss_pred CCccEEEECCCcchHHHHHhhcC-C-CeEEEEecCCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGS 79 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~ 79 (571)
...-|+|||+|..|+.+|..|+. | .++.|++....
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 45689999999999999999999 8 58999987653
No 357
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=68.32 E-value=3.5 Score=42.39 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=29.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.+.|||.|.+|+.+|..|.+ |.+|.+.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 359999999999999999999 99999999875
No 358
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=68.27 E-value=3.7 Score=39.98 Aligned_cols=32 Identities=22% Similarity=0.423 Sum_probs=28.8
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999 99999987653
No 359
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=68.14 E-value=2.5 Score=42.08 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=27.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||+|..|..+|..|++ |.+|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 59999999999999999999 9999999875
No 360
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=67.87 E-value=4.5 Score=35.22 Aligned_cols=54 Identities=19% Similarity=0.090 Sum_probs=36.9
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHHHHhhc
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 291 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~LLl~Sg 291 (571)
..+++.|++++++ +|++|..+++ . +.+...+| ++. ++.||+|+|.. |.++...|
T Consensus 64 ~~~~~~gv~v~~~-~v~~i~~~~~-----~---~~v~~~~g---~i~-----ad~vI~A~G~~--~~~~~~~g 117 (180)
T 2ywl_A 64 AHARRYGAEVRPG-VVKGVRDMGG-----V---FEVETEEG---VEK-----AERLLLCTHKD--PTLPSLLG 117 (180)
T ss_dssp HHHHHTTCEEEEC-CCCEEEECSS-----S---EEEECSSC---EEE-----EEEEEECCTTC--CHHHHHHT
T ss_pred HHHHHcCCEEEeC-EEEEEEEcCC-----E---EEEEECCC---EEE-----ECEEEECCCCC--CCccccCC
Confidence 3455679999999 9999987654 2 33433355 333 79999999975 45655554
No 361
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=67.60 E-value=2.8 Score=42.33 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=29.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.--|+|||+|.+|..+|..|.. |.+|+++++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3469999999999999999988 99999998764
No 362
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=67.56 E-value=3.1 Score=38.68 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=29.6
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
...+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4568999999999999999999 99999998764
No 363
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=67.22 E-value=3.8 Score=38.81 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-++|.|+|..|..++.+|.+ |.+|.++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 39999999999999999999 99999998764
No 364
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=67.14 E-value=4.9 Score=42.55 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=30.5
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+-.+||||.|..|..+|..|.+ |.+|+++|...
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~ 160 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNY 160 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCH
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCH
Confidence 34579999999999999999999 99999999764
No 365
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=66.85 E-value=3.3 Score=43.65 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=30.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.|+|||+|..|+-+|..|++ +.+|.+++|.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 468999999999999999999 9999999998643
No 366
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=66.83 E-value=3.9 Score=39.71 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=28.8
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
.--+.|||+|..|..+|..|+. |. .|.+++.-
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3459999999999999999999 88 99999876
No 367
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=66.83 E-value=3 Score=40.79 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
-+.|||+|..|..+|..|+. |. +|.+++...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 59999999999999999999 87 999998763
No 368
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=66.45 E-value=3.2 Score=41.20 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--++|+|+|.+|..+|..|.. |.+|.++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999998 99999998763
No 369
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=66.39 E-value=3.7 Score=39.49 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=27.6
Q ss_pred cEEEEC-CCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIG-GGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVG-sG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-+.||| .|..|..+|..|++ |.+|.++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 499999 99999999999999 9999999765
No 370
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=66.34 E-value=1.9 Score=42.28 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.+||+|.|-.|..+|..|.+ |. |+++|+..
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 369999999999999999999 99 99999764
No 371
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=66.28 E-value=3.4 Score=39.17 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-++|.|+|..|..++.+|.+ |.+|.++.|...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 39999999999999999999 999999988743
No 372
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=66.17 E-value=3.3 Score=41.43 Aligned_cols=32 Identities=34% Similarity=0.458 Sum_probs=28.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.--++|||+|..|..+|..|.. |.+|+++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4469999999999999999998 9999999875
No 373
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=66.09 E-value=2.3 Score=43.81 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=40.7
Q ss_pred CCCceecHHHhhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHH
Q 008281 207 QNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 286 (571)
Q Consensus 207 ~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~L 286 (571)
.+|.......+...+.+.|++|+++++|++|..+++ ++..|.+ ++.. +. ++.||+|+++....+|
T Consensus 230 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~~---~~~~--~~-----ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 230 RGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVSL---RDSS--LE-----ADHVISAIPASVLSEL 294 (477)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGG-----GCEEEEC---SSCE--EE-----ESEEEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEEE---CCeE--EE-----cCEEEECCCHHHHHHh
Confidence 445333333344445556999999999999988765 3333432 3332 32 6899999987555444
No 374
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=65.96 E-value=3.2 Score=40.40 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=27.0
Q ss_pred EEEECCCcchHHHHHhhcC-CC--eEEEEecC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 77 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (571)
+.|||+|..|..+|..|+. |. +|.++++.
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 7899999999999999999 88 99999875
No 375
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=65.87 E-value=3.8 Score=39.99 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
.-+.|||+|..|..+|..|+. |. +|.|++.-.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 359999999999999999999 87 899998753
No 376
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=65.81 E-value=3.8 Score=39.16 Aligned_cols=29 Identities=28% Similarity=0.536 Sum_probs=26.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-++|+|+|..|..+|..|++ | +|.+..|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 49999999999999999999 9 99998764
No 377
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=65.57 E-value=3.9 Score=39.33 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 48999999999999999999 99999997753
No 378
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=65.32 E-value=4.4 Score=39.21 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.+.|||.|..|..+|..|++ |.+|.++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 459999999999999999999 99999988753
No 379
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=65.25 E-value=3.6 Score=38.97 Aligned_cols=32 Identities=28% Similarity=0.469 Sum_probs=28.8
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.++|+|+|-+|..+|..|++ |.+|.|..|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 459999999999999999999 99999997764
No 380
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=65.24 E-value=3.6 Score=39.46 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=28.8
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--+.|||.|..|..+|.+|.. |.+|++.++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999998 99999998763
No 381
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=65.23 E-value=3.7 Score=43.49 Aligned_cols=35 Identities=20% Similarity=0.504 Sum_probs=30.6
Q ss_pred CccEEEECCCcchHHHHHhhcC-C-CeEEEEecCCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSP 80 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~ 80 (571)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4579999999999999999999 8 489999887644
No 382
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=65.13 E-value=3.8 Score=39.09 Aligned_cols=31 Identities=32% Similarity=0.491 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 38899999999999999999 99999998764
No 383
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=64.75 E-value=4.4 Score=38.85 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=27.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
..+.|||.|..|..+|..|++ |.+|.++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 359999999999999999999 9999998765
No 384
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=64.60 E-value=4.2 Score=39.15 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=27.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
.++|||+|.+|..+|..|++ |. +|.|..|.
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred EEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 59999999999999999999 86 89998775
No 385
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=64.54 E-value=3.5 Score=41.35 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.-.|+|+|+|.+|..+|..|.. |.+|++.++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4569999999999999999888 99999998764
No 386
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=64.40 E-value=3.6 Score=40.84 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=27.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
--++|+|.|..|..+|.+|.+ |.+|++.++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 349999999999999999999 999998874
No 387
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=64.37 E-value=3.6 Score=39.62 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 359999999999999999999 99999997653
No 388
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=64.08 E-value=3.9 Score=39.37 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.--+.|||.|..|..+|.+|.. |.+|++.++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3459999999999999999999 99999998753
No 389
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=63.97 E-value=3.7 Score=39.72 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=29.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 459999999999999999999 99999998764
No 390
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=63.95 E-value=4.3 Score=36.49 Aligned_cols=30 Identities=27% Similarity=0.366 Sum_probs=27.1
Q ss_pred EEEECC-CcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++|.|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 789995 9999999999999 99999998863
No 391
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=63.93 E-value=3.8 Score=39.68 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=27.3
Q ss_pred cEEEECCCcchHHHHHhhcC-C--CeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G 77 (571)
-+.|||+|..|..+|..|++ | ..|.++++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 38899999999999999999 8 689999875
No 392
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=63.85 E-value=3.8 Score=39.10 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999 99999988764
No 393
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=63.82 E-value=7.2 Score=38.85 Aligned_cols=56 Identities=21% Similarity=0.153 Sum_probs=37.6
Q ss_pred hhhhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCc
Q 008281 217 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 283 (571)
Q Consensus 217 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~t 283 (571)
++..+.+.|++|+.+++|++|..++++ . ..|.+.+ +|+..++. ++.||.|.|....
T Consensus 109 L~~~~~~~g~~i~~~~~v~~i~~~~~~----~-~~v~~~~-~g~~~~~~-----a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 109 LMEAREACGATTVYQAAEVRLHDLQGE----R-PYVTFER-DGERLRLD-----CDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHTTCEEESSCEEEEEECTTSS----S-CEEEEEE-TTEEEEEE-----CSEEEECCCTTCS
T ss_pred HHHHHHhcCCeEEeceeEEEEEEecCC----c-eEEEEec-CCcEEEEE-----eCEEEECCCCCcH
Confidence 334444469999999999999876431 2 2355533 67544454 7999999997544
No 394
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=63.77 E-value=4.1 Score=40.28 Aligned_cols=33 Identities=18% Similarity=0.413 Sum_probs=29.3
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
..-|+|||+|..|+.+|..|+. |. ++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5579999999999999999999 84 899998764
No 395
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=63.74 E-value=3.4 Score=42.79 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+.|||+|..|..+|..|++ |.+|++.++..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 48999999999999999999 99999998763
No 396
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=63.72 E-value=3.9 Score=38.31 Aligned_cols=29 Identities=24% Similarity=0.528 Sum_probs=26.9
Q ss_pred EEEECCCcchHHHHHhhcC-C-CeEEEEecC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-N-ASVLLLERG 77 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g-~~VlvlE~G 77 (571)
+.|||.|..|..+|..|++ | .+|.+.++.
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 7899999999999999999 9 899998765
No 397
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=63.58 E-value=4.1 Score=36.80 Aligned_cols=29 Identities=28% Similarity=0.499 Sum_probs=26.9
Q ss_pred EEEECC-CcchHHHHHhhcC-CCeEEEEecC
Q 008281 49 YIIIGG-GTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G 77 (571)
++|.|+ |..|..++.+|.+ |.+|.++-|.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 889997 9999999999999 9999999876
No 398
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=63.31 E-value=3.9 Score=38.70 Aligned_cols=29 Identities=24% Similarity=0.358 Sum_probs=26.7
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
+.|||+|..|..+|..|.+ |.+|.++++.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7899999999999999999 9999998765
No 399
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=63.12 E-value=3 Score=39.54 Aligned_cols=31 Identities=26% Similarity=0.334 Sum_probs=28.1
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-++|+|+|.+|..+|..|++ |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999997763
No 400
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=62.79 E-value=4.9 Score=39.07 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=28.8
Q ss_pred cEEEECCCcchHHHHHhhcC-C-CeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~ 78 (571)
.+.|||.|..|..+|..|++ | .+|.+.++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 49999999999999999999 9 9999998874
No 401
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=62.75 E-value=4.7 Score=38.58 Aligned_cols=30 Identities=27% Similarity=0.420 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||.|..|..+|..|++ |.+|.++++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 49999999999999999999 9999998765
No 402
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=62.68 E-value=4.4 Score=42.97 Aligned_cols=34 Identities=38% Similarity=0.617 Sum_probs=31.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCCCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 80 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (571)
-.+||||.|-.|..+|..|.+ |.+|+++|+....
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 569999999999999999999 9999999988643
No 403
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=62.54 E-value=3.7 Score=42.01 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-+.|||.|.+|+.+|..|++ |.+|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 38999999999999999999 999999998754
No 404
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=62.35 E-value=4.3 Score=40.23 Aligned_cols=35 Identities=14% Similarity=0.222 Sum_probs=29.7
Q ss_pred CCCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 44 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.+.-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 344579999999999999999999 99999998753
No 405
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=62.21 E-value=5.4 Score=36.00 Aligned_cols=30 Identities=27% Similarity=0.354 Sum_probs=27.5
Q ss_pred EEEEC-CCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIG-GGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVG-sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++|.| +|..|..++.+|.+ |.+|.++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 78999 79999999999999 99999998874
No 406
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=62.17 E-value=5 Score=41.32 Aligned_cols=32 Identities=44% Similarity=0.619 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhcCCCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (571)
-.++|+|+|-.|..+|..|.++.+|-|+|+..
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred cEEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 36999999999999999997789999999875
No 407
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=62.17 E-value=5.8 Score=40.42 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=29.9
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
....+.|||.|..|+.+|..|++ |.+|+.++-..
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34579999999999999999999 99999998653
No 408
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=62.15 E-value=4.1 Score=38.20 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=26.6
Q ss_pred cEEEECC-C-cchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGG-G-TAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGs-G-~aG~~~A~~La~-g~~VlvlE~G 77 (571)
=++|.|+ | -.|..+|.+|++ |.+|+++.+.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 4899998 7 499999999999 9999999775
No 409
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=61.67 E-value=3.7 Score=40.94 Aligned_cols=32 Identities=16% Similarity=0.244 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhcC-C-------CeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N-------ASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-------~~VlvlE~G~~ 79 (571)
-+.|||+|..|..+|..|++ | .+|.++.+...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 49999999999999999999 8 89999987653
No 410
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=61.66 E-value=4.7 Score=36.93 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=28.1
Q ss_pred cEEEECC-CcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-++|.|+ |..|..+|.+|.+ |.+|.++.|..
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4899997 9999999999999 99999998864
No 411
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=61.51 E-value=5 Score=35.57 Aligned_cols=31 Identities=29% Similarity=0.362 Sum_probs=27.9
Q ss_pred cEEEECC-CcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-++|+|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 3899998 9999999999999 99999998864
No 412
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=61.47 E-value=4.5 Score=38.40 Aligned_cols=30 Identities=27% Similarity=0.468 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||+|..|..+|..|.+ |.+|.+..|.
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 59999999999999999999 8899999876
No 413
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=61.37 E-value=4.6 Score=38.54 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=27.6
Q ss_pred ccEEEEC-CCcchHHHHHhhcC-CCeEEEEecC
Q 008281 47 YDYIIIG-GGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 47 ~DvIIVG-sG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
--++|+| +|..|..+|..|++ |.+|.++.|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 3589999 99999999999999 9999998775
No 414
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=61.29 E-value=5.2 Score=40.37 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=27.3
Q ss_pred EEEECCCcchHHHHHhhcCCCeEEEEecCC
Q 008281 49 YIIIGGGTAGCPLAATLSQNASVLLLERGG 78 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (571)
+.|||.|..|+.+|..|++|.+|.++++..
T Consensus 3 I~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999988999998753
No 415
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=61.00 E-value=3.5 Score=40.69 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=28.9
Q ss_pred cEEEECCCcchHHHHHhhcC-C-------CeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N-------ASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-------~~VlvlE~G~~ 79 (571)
.+.|||+|..|..+|..|++ | .+|.++++...
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 59999999999999999999 8 89999987653
No 416
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=60.80 E-value=5.5 Score=38.02 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=27.2
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7899999999999999999 99999987753
No 417
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=60.55 E-value=4.8 Score=40.55 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=25.7
Q ss_pred cEEEECCCcchHHHHHhhcC--CCeEEEEe
Q 008281 48 DYIIIGGGTAGCPLAATLSQ--NASVLLLE 75 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~--g~~VlvlE 75 (571)
.+.|||+|..|..+|..|++ |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999976 88999997
No 418
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=60.48 E-value=4.6 Score=41.11 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=28.4
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
..-|||.|..|+.+|..|++ |.+|+++++..
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46799999999999999999 99999998864
No 419
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=60.44 E-value=4.7 Score=39.77 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=27.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
.--++|+|.|..|..+|.+|.+ |.+|++.+.
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3459999999999999999999 999998874
No 420
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=60.18 E-value=6 Score=37.71 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=28.3
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
.-.++|+|+|-+|..+|..|.+ |. +|.|+-|-.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3469999999999999999999 86 899987653
No 421
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=60.14 E-value=4.9 Score=38.91 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=27.1
Q ss_pred EEEECCCcchHHHHHhhcC---CCeEEEEecCC
Q 008281 49 YIIIGGGTAGCPLAATLSQ---NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~---g~~VlvlE~G~ 78 (571)
+.|||+|..|..+|..|+. +.+|.++++..
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 7899999999999999997 57999999864
No 422
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=60.13 E-value=3.7 Score=37.86 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=26.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
.+.|||.|..|..+|..|.+ |.+|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 58999999999999999999 999998766
No 423
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=60.03 E-value=4.8 Score=39.09 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=28.3
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC--eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (571)
--+.|||.|..|..+|..|.+ |. +|.+.++..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 359999999999999999999 88 999987753
No 424
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=60.01 E-value=4.9 Score=38.95 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=28.5
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
-.+.|||.|..|..+|..|++ |. +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 469999999999999999999 98 99999875
No 425
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=59.95 E-value=5.2 Score=38.81 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=27.6
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
--++|+|+|-+|..+|..|++ |. +|.|+-|-
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 359999999999999999999 87 89998776
No 426
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=59.89 E-value=4.8 Score=38.12 Aligned_cols=29 Identities=21% Similarity=0.337 Sum_probs=26.4
Q ss_pred EEEECCCcchHHHHHhhcC-CC--eEEEEecC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 77 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (571)
+.|||.|..|..+|..|++ |. +|++.++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 7899999999999999999 87 89998765
No 427
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=59.84 E-value=5.9 Score=38.65 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=27.4
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC--eEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (571)
--+.|||+|..|..+|..|+. |. .|.+++.-
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 359999999999999999999 75 89999863
No 428
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=59.73 E-value=6 Score=40.65 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=34.7
Q ss_pred CCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEe--------------CCCceeEEeeecCCCeeEEEecCCcCcH
Q 008281 224 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD--------------ATGAKHRAYLKNGPKNEIIVSAGALGSP 284 (571)
Q Consensus 224 ~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~--------------~~g~~~~~~~~~~a~~~VVLaAGai~tp 284 (571)
.|+++++++.+++|.-+ + ++.+|++.+ .+|+..++ .++.||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i-----~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R-----KVERIVLGRNELVSDGSGRVAAKDTGEREEL-----PAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEE-----ECSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-C-----cEeEEEEEEEEecCCCcccccccCCCceEEE-----EcCEEEEccccccCC
Confidence 58999999999999754 2 556666642 12433344 379999999976655
No 429
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=59.61 E-value=8.3 Score=38.90 Aligned_cols=45 Identities=16% Similarity=0.082 Sum_probs=31.7
Q ss_pred hcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCC
Q 008281 220 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 280 (571)
Q Consensus 220 ~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGa 280 (571)
.+++.+ +|+++++|++|..+++ + |.+...+|+. +. ++.||+|+|.
T Consensus 213 ~~~~~g-~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~~-----ad~vi~a~~~ 257 (431)
T 3k7m_X 213 MSQEIP-EIRLQTVVTGIDQSGD-----V---VNVTVKDGHA--FQ-----AHSVIVATPM 257 (431)
T ss_dssp HHTTCS-CEESSCCEEEEECSSS-----S---EEEEETTSCC--EE-----EEEEEECSCG
T ss_pred HHhhCC-ceEeCCEEEEEEEcCC-----e---EEEEECCCCE--EE-----eCEEEEecCc
Confidence 345567 9999999999987665 3 3343346653 32 6999999984
No 430
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=59.56 E-value=5.7 Score=40.40 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=28.9
Q ss_pred ccEEEECCCcchHHHHHhhcCCCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (571)
-.+.|||.|..|+.+|..|++|.+|+++++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 35999999999999999999999999998764
No 431
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=59.53 E-value=5 Score=40.58 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=28.8
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.--++|||.|..|..+|.+|.. |.+|++.|+.
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3469999999999999999998 9999999865
No 432
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=59.36 E-value=5 Score=38.19 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=27.6
Q ss_pred cEEEECC-CcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||+ |..|..+|..|++ |.+|.++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4999999 9999999999999 9999998765
No 433
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=58.94 E-value=5.1 Score=41.19 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
--++|||+|..|...|..|.+ |.+|.|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 359999999999999999999 9999999864
No 434
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=58.91 E-value=5.3 Score=38.10 Aligned_cols=31 Identities=16% Similarity=0.284 Sum_probs=27.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
--++|+|+|-+|..+|..|++ |. +|.|+.|.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 459999999999999999999 87 79998665
No 435
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=58.87 E-value=6.1 Score=40.42 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.6
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
...+-|||.|.-|+.+|..|++ |.+|+++++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4568899999999999999999 999999998753
No 436
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=58.66 E-value=8.2 Score=40.12 Aligned_cols=49 Identities=20% Similarity=0.232 Sum_probs=35.9
Q ss_pred hhcCCCCcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCc
Q 008281 219 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 281 (571)
Q Consensus 219 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai 281 (571)
..+.+.|++++.+ +|++|..++++ ++.+|.+. +|+ ++. ++.||.|+|+.
T Consensus 181 ~~a~~~gv~~~~~-~v~~i~~~~~~----~~~~v~~~--~g~--~~~-----ad~vV~A~G~~ 229 (511)
T 2weu_A 181 EYAIARGVRHVVD-DVQHVGQDERG----WISGVHTK--QHG--EIS-----GDLFVDCTGFR 229 (511)
T ss_dssp HHHHHTTCEEEEC-CEEEEEECTTS----CEEEEEES--SSC--EEE-----CSEEEECCGGG
T ss_pred HHHHHCCCEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EEE-----cCEEEECCCcc
Confidence 4455579999999 99999886543 66677664 564 343 79999999963
No 437
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=58.54 E-value=6 Score=40.93 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=29.1
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
+-++.|||.|..|..+|..|++ |.+|.+..|.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4569999999999999999999 9999998765
No 438
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=58.53 E-value=10 Score=38.58 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=32.7
Q ss_pred cEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCcCcHHH
Q 008281 226 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 286 (571)
Q Consensus 226 ~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai~tp~L 286 (571)
.+|+++++|++|..+++ + |.+...+|+. +. ++.||+|+......+|
T Consensus 248 ~~i~~~~~V~~i~~~~~-----~---~~v~~~~g~~--~~-----ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-----C---YSLELDNGVT--LD-----ADSVIVTAPHKAAAGM 293 (470)
T ss_dssp EEEECSCCEEEEEECSS-----S---EEEEESSSCE--EE-----ESEEEECSCHHHHHHH
T ss_pred CEEEeCCceEEEEEcCC-----e---EEEEECCCCE--EE-----CCEEEECCCHHHHHHH
Confidence 79999999999998765 3 3444446753 32 6899999986544444
No 439
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=58.43 E-value=5 Score=38.13 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=28.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
-.++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 359999999999999999999 87 899987764
No 440
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=58.24 E-value=5.4 Score=43.66 Aligned_cols=31 Identities=39% Similarity=0.515 Sum_probs=28.7
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+.|||+|..|..+|..|++ |.+|++.++..
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998764
No 441
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=58.01 E-value=5.5 Score=39.25 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=29.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (571)
...|+|||.|..|+.+|..|+. |. ++.|++-...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 5679999999999999999999 85 8999986643
No 442
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=57.94 E-value=5.5 Score=38.51 Aligned_cols=30 Identities=30% Similarity=0.403 Sum_probs=27.0
Q ss_pred cEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
-+.|||+|..|..+|..|+. |. +|.+++.-
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 48999999999999999998 75 89999875
No 443
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=57.71 E-value=7.1 Score=37.18 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=27.8
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
.--++|+|+|-+|..+|..|++ |. +|.|..|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 3458999999999999999999 95 99998775
No 444
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=57.64 E-value=2.9 Score=38.17 Aligned_cols=30 Identities=33% Similarity=0.661 Sum_probs=26.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEE-EecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLL-LERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~Vlv-lE~G 77 (571)
.+.|||+|..|..+|..|++ |.+|.+ .++.
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 59999999999999999999 999888 6654
No 445
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=57.59 E-value=5.8 Score=37.12 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=28.0
Q ss_pred cEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
-++|||+|-+|..++..|.+ |. +|.|..|-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 69999999999999999999 87 899998753
No 446
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=57.57 E-value=7.5 Score=39.81 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=27.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-++|+|+|..|..+|..|++ |.+|.++.|.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 38999999999999999999 9999998875
No 447
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=57.42 E-value=5.5 Score=41.25 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=28.6
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--++|||.|..|..+|..|.. |.+|++.|+..
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999988 99999998753
No 448
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=57.29 E-value=8.6 Score=36.18 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=26.6
Q ss_pred EEEECC---CcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIGG---GTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGs---G~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889997 5899999999999 99999998764
No 449
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=57.12 E-value=6.1 Score=40.22 Aligned_cols=34 Identities=21% Similarity=0.461 Sum_probs=29.7
Q ss_pred CCccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 45 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
....|+|||+|..|+.+|..|+. |. ++.|++...
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 35679999999999999999999 84 899998664
No 450
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=57.12 E-value=6.3 Score=35.59 Aligned_cols=30 Identities=30% Similarity=0.367 Sum_probs=26.8
Q ss_pred EEEEC-CCcchHHHHHhhc-C-CCeEEEEecCC
Q 008281 49 YIIIG-GGTAGCPLAATLS-Q-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVG-sG~aG~~~A~~La-~-g~~VlvlE~G~ 78 (571)
++|.| +|..|..+|.+|+ + |.+|.++.|..
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 5999999999999 6 99999998763
No 451
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=57.06 E-value=6.7 Score=36.15 Aligned_cols=30 Identities=27% Similarity=0.472 Sum_probs=26.5
Q ss_pred EEEECC-CcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788886 8999999999999 99999998764
No 452
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=56.29 E-value=7.7 Score=37.36 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-.+.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 459999999999999999999 99999987653
No 453
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=55.63 E-value=6.4 Score=39.99 Aligned_cols=31 Identities=26% Similarity=0.230 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
--++|||.|..|..+|.+|.. |.+|++.|+.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~d 279 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVD 279 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 359999999999999999988 9999999864
No 454
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=55.54 E-value=7.3 Score=35.67 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=27.6
Q ss_pred cEEEEC-CCcchHHHHHhhcC-C-CeEEEEecCC
Q 008281 48 DYIIIG-GGTAGCPLAATLSQ-N-ASVLLLERGG 78 (571)
Q Consensus 48 DvIIVG-sG~aG~~~A~~La~-g-~~VlvlE~G~ 78 (571)
-++|.| +|..|..+|.+|++ | .+|.++.|..
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 389999 69999999999999 8 8999998864
No 455
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=55.52 E-value=6.5 Score=37.73 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=26.9
Q ss_pred EEEECCCcchHHHHHhhcC-CC--eEEEEecCC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 78 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (571)
+.|||+|..|..+|..|+. +. .|.|+++-.
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999999 76 899998753
No 456
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=55.45 E-value=9 Score=37.12 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=28.2
Q ss_pred CCccEEEECCC-cchHHHHHhhcC-CCeEEEEecC
Q 008281 45 SYYDYIIIGGG-TAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 45 ~~~DvIIVGsG-~aG~~~A~~La~-g~~VlvlE~G 77 (571)
..-.++|||+| ..|..+|..|.. |.+|.++.|.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 35579999999 579999999999 9999988665
No 457
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=55.34 E-value=7.9 Score=40.80 Aligned_cols=49 Identities=18% Similarity=0.166 Sum_probs=35.3
Q ss_pred hhcCCC-CcEEEcCcEEEEEEecCCCCCCCeEEEEEEEeCCCceeEEeeecCCCeeEEEecCCc
Q 008281 219 EYANPS-GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 281 (571)
Q Consensus 219 ~~~~~~-g~~i~~~~~V~~i~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~a~~~VVLaAGai 281 (571)
..+.+. |++++.+ +|++|..++++ ++.+|.+. +|. ++. ++.||+|+|+.
T Consensus 202 ~~~~~~~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i~-----ad~vI~A~G~~ 251 (550)
T 2e4g_A 202 RFATEKLGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VFD-----ADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHSCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EEE-----CSEEEECCGGG
T ss_pred HHHHhcCCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EEE-----CCEEEECCCCc
Confidence 344455 9999999 99999886543 66677664 563 343 79999999963
No 458
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=55.19 E-value=6.8 Score=37.11 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=27.6
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
.--++|+|+|-+|..+|..|++ |. +|.|..|-
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3459999999999999999999 84 89998764
No 459
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=60.01 E-value=2.5 Score=38.06 Aligned_cols=31 Identities=29% Similarity=0.298 Sum_probs=27.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-+.|||.|..|..+|..|.+ |.+|.++++..
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 48899999999999999999 99999987764
No 460
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=54.99 E-value=7.1 Score=37.79 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=27.6
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
--++|+|+|-+|..+|..|++ |. +|.|.-|-
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 459999999999999999999 86 89998776
No 461
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=54.98 E-value=6.7 Score=36.62 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=27.5
Q ss_pred cEEEECCCcchHHHHHhhcC-C----CeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-N----ASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g----~~VlvlE~G~ 78 (571)
.+.|||.|..|..+|..|++ | .+|.+.++..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 49999999999999999999 8 6899987653
No 462
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=54.94 E-value=6.4 Score=36.92 Aligned_cols=30 Identities=27% Similarity=0.402 Sum_probs=27.1
Q ss_pred cEEEECCCcchHHHHHhhcC-CCe-EEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NAS-VLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~-VlvlE~G 77 (571)
.+.|||+|..|..+|..|++ |.+ |.+.++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 59999999999999999999 988 8888765
No 463
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=54.91 E-value=7.3 Score=37.85 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=28.5
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC--eEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (571)
...+.|||+|..|..+|..|+. +. .|.+++.-.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4579999999999999999998 65 899998753
No 464
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=54.83 E-value=6.2 Score=40.83 Aligned_cols=30 Identities=27% Similarity=0.441 Sum_probs=27.7
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||.|..|..+|..|++ |.+|.+.++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 58899999999999999999 9999999765
No 465
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=54.82 E-value=5.6 Score=37.25 Aligned_cols=28 Identities=25% Similarity=0.204 Sum_probs=25.3
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEec
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (571)
+.|||.|..|..+|..|++ |.+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7899999999999999999 999988654
No 466
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=54.81 E-value=6.4 Score=36.93 Aligned_cols=30 Identities=27% Similarity=0.459 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||+|..|..+|..|.+ |.+|.+..+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 69999999999999999998 8899998765
No 467
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=54.66 E-value=6.8 Score=38.22 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=28.0
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC--eEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (571)
.--+.|||+|..|..+|..|+. |. .|.++|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 3469999999999999999999 76 89999873
No 468
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=54.53 E-value=6.9 Score=37.74 Aligned_cols=32 Identities=22% Similarity=0.446 Sum_probs=27.9
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC--eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (571)
.-+.|||+|..|..+|..|+. |. .|.|+|.-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 459999999999999999998 87 899998764
No 469
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.51 E-value=6.4 Score=38.65 Aligned_cols=30 Identities=33% Similarity=0.375 Sum_probs=27.6
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
-+.|||.|..|..+|..|.+ |.+|.+.++.
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 38999999999999999999 9999998865
No 470
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=54.12 E-value=8.3 Score=36.93 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=27.7
Q ss_pred ccEEEECCCcchHHHHHhhcCCCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (571)
--+-|||.|..|..+|..|+.|.+|.+.++..
T Consensus 13 ~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIASKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHHcCCEEEEEECCH
Confidence 35899999999999999988778999998763
No 471
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=53.90 E-value=7.5 Score=42.53 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=29.1
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--|-|||+|..|.-+|..++. |.+|+|+|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 359999999999999999999 99999998663
No 472
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=53.80 E-value=7.2 Score=38.00 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=28.4
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
.-+.|||+|..|..+|..|+. |. .|.|++.-.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 359999999999999999998 77 999998754
No 473
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=53.75 E-value=8.1 Score=36.24 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=26.3
Q ss_pred EEEEC---CCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIG---GGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVG---sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++|.| +|..|..+|.+|++ |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 88999 47889999999999 99999997753
No 474
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=53.74 E-value=8.1 Score=37.79 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=28.7
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 359999999999999999999 99999998753
No 475
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=53.73 E-value=7 Score=37.44 Aligned_cols=32 Identities=31% Similarity=0.410 Sum_probs=28.9
Q ss_pred cEEEECC-CcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
-++|.|+ |..|..++.+|.+ |.+|.++.|...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3899998 9999999999999 999999988754
No 476
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=53.59 E-value=7.1 Score=37.92 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=28.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-C----CeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-N----ASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g----~~VlvlE~G~ 78 (571)
-.+.|||.|..|..+|..|++ | .+|.+.++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 359999999999999999999 8 7899987764
No 477
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=53.52 E-value=7.2 Score=41.65 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=29.9
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecCCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 79 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (571)
..-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~V 52 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTI 52 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBC
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEE
Confidence 4569999999999999999999 85 8999997754
No 478
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=53.30 E-value=7.4 Score=37.93 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=26.8
Q ss_pred cEEEECCCcchHHHHHhhcC-CC--eEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (571)
-+.|||+|..|..+|..|+. +. .+.|++.-
T Consensus 11 kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 11 KVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 59999999999999999998 75 89999873
No 479
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=53.28 E-value=6.9 Score=39.78 Aligned_cols=29 Identities=24% Similarity=0.442 Sum_probs=26.6
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC---eEEEEe
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA---SVLLLE 75 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~---~VlvlE 75 (571)
--++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 359999999999999999999 86 799998
No 480
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=53.07 E-value=9 Score=35.68 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=27.2
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.+.|||.|..|..+|..|.+ |.+|.+.++.
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 48999999999999999999 8899998765
No 481
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=53.03 E-value=8.7 Score=35.81 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=26.0
Q ss_pred EEEECC---CcchHHHHHhhcC-CCeEEEEecC
Q 008281 49 YIIIGG---GTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 49 vIIVGs---G~aG~~~A~~La~-g~~VlvlE~G 77 (571)
++|.|+ |..|..+|.+|++ |.+|+++.|.
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESC
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 899997 5889999999999 9999999765
No 482
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=52.96 E-value=7.4 Score=39.39 Aligned_cols=32 Identities=28% Similarity=0.219 Sum_probs=28.7
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (571)
.--++|||-|..|..+|.+|.. |.+|++.|+.
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3459999999999999999999 9999999874
No 483
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=52.77 E-value=8.9 Score=37.44 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=28.8
Q ss_pred ccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
--+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 359999999999999999999 99999998753
No 484
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=52.74 E-value=9.1 Score=39.46 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=29.0
Q ss_pred cEEEECCCcchHHHHHhhcC--CC-eEEEEecCCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ--NA-SVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~--g~-~VlvlE~G~~ 79 (571)
.+.|||.|..|+.+|..|++ |. +|+++++...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 59999999999999999997 68 9999998764
No 485
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=52.73 E-value=9.4 Score=35.64 Aligned_cols=29 Identities=17% Similarity=0.366 Sum_probs=24.9
Q ss_pred EEEECC-Cc--chHHHHHhhcC-CCeEEEEecC
Q 008281 49 YIIIGG-GT--AGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 49 vIIVGs-G~--aG~~~A~~La~-g~~VlvlE~G 77 (571)
++|.|+ |. .|..+|.+|++ |.+|+++.+.
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 788886 44 79999999999 9999999765
No 486
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=52.72 E-value=8.7 Score=37.90 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=27.5
Q ss_pred EEEECCCcchHHHHHhhcC-CCeEEEEecCCC
Q 008281 49 YIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (571)
++|+|||.-|..+|+.+.+ |.+|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 7999999999999998888 999999987543
No 487
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=52.71 E-value=9.2 Score=37.03 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=27.8
Q ss_pred cEEEECC-CcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
-++|.|+ |..|..+|.+|.+ |.+|.++.|..
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4899987 9999999999999 99999998853
No 488
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=52.62 E-value=7.4 Score=39.22 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=28.2
Q ss_pred CccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
.--++|||+|..|..+|..|.. |. +|++..+.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3459999999999999999998 97 89998765
No 489
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=52.54 E-value=9.4 Score=37.79 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=27.7
Q ss_pred CccEEEECCCcchHHHHHhhcCCCeEEEEecC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQNASVLLLERG 77 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G 77 (571)
+..|+|+|+|..|..+|..|++..+|.+..+.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~ 47 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVN 47 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESC
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcC
Confidence 44599999999999999999998888887654
No 490
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=52.47 E-value=9.2 Score=36.54 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=26.1
Q ss_pred cEEEECCC---cchHHHHHhhcC-CCeEEEEecC
Q 008281 48 DYIIIGGG---TAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 48 DvIIVGsG---~aG~~~A~~La~-g~~VlvlE~G 77 (571)
=++|.|++ ..|..+|.+|++ |.+|+++.+.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 38888985 789999999999 9999999775
No 491
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=52.41 E-value=10 Score=36.50 Aligned_cols=28 Identities=25% Similarity=0.217 Sum_probs=24.9
Q ss_pred EEEECC---CcchHHHHHhhcC-CCeEEEEec
Q 008281 49 YIIIGG---GTAGCPLAATLSQ-NASVLLLER 76 (571)
Q Consensus 49 vIIVGs---G~aG~~~A~~La~-g~~VlvlE~ 76 (571)
+||.|+ |-.|..+|.+|++ |.+|+++.+
T Consensus 12 ~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 12 AFVAGVADSHGYGWAIAKHLASAGARVALGTW 43 (315)
T ss_dssp EEEECCSSSSSHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEeCCCCCCChHHHHHHHHHHCCCEEEEEec
Confidence 889996 7789999999999 999999864
No 492
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=52.40 E-value=7.7 Score=40.16 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=28.3
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++.|||.|..|..+|..|++ |.+|.+.++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999999 99999998753
No 493
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=52.25 E-value=7.8 Score=37.67 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=28.0
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecCC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 78 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (571)
--+.|||+|..|..+|..|+. +. .|.|++.-.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 359999999999999999998 66 999998764
No 494
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=52.04 E-value=10 Score=36.95 Aligned_cols=32 Identities=25% Similarity=0.045 Sum_probs=27.6
Q ss_pred cEEEECCCcchHH-HHHhhcC-CCeEEEEecCCC
Q 008281 48 DYIIIGGGTAGCP-LAATLSQ-NASVLLLERGGS 79 (571)
Q Consensus 48 DvIIVGsG~aG~~-~A~~La~-g~~VlvlE~G~~ 79 (571)
.+.|||.|.+|+. +|..|.+ |.+|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4899999999996 7777888 999999998753
No 495
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=51.95 E-value=17 Score=37.26 Aligned_cols=43 Identities=9% Similarity=-0.096 Sum_probs=30.3
Q ss_pred cCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhcCCC
Q 008281 526 VDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASNDS 570 (571)
Q Consensus 526 ~~NL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~~~~~~ 570 (571)
+.|||.|+.++.|.-++. +--.+.=++|+|+.|++...+++|.
T Consensus 422 ~~~l~fAG~~t~~~~~g~--v~GA~~SG~~aA~~i~~~l~~~~~~ 464 (472)
T 1b37_A 422 VGRVYFTGEHTSEHYNGY--VHGAYLSGIDSAEILINCAQKKMCK 464 (472)
T ss_dssp BTTEEECSGGGCTTTTTS--HHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred CCcEEEeecccCCCCCCc--hhHHHHHHHHHHHHHHHHHHhCcCC
Confidence 469999999998853322 2233345789999999887777774
No 496
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=51.72 E-value=6.7 Score=37.32 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=26.0
Q ss_pred cEEEECCCcchHHHHHhhcC-CCeEEEEe
Q 008281 48 DYIIIGGGTAGCPLAATLSQ-NASVLLLE 75 (571)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE 75 (571)
.+.|||.|..|..+|..|++ |.+|.+++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 48999999999999999999 99999886
No 497
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=51.70 E-value=9.5 Score=37.29 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=28.9
Q ss_pred CccEEEECCCcchHHHHHhhcC-CCeEEEEecCC
Q 008281 46 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
.--+.|||.|..|..+|.+|.. |.+|++.++..
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 3359999999999999999999 99999988653
No 498
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=51.69 E-value=8.5 Score=35.26 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=25.6
Q ss_pred EEEECC-CcchHHHHHhhcC-CCeEEEEecC
Q 008281 49 YIIIGG-GTAGCPLAATLSQ-NASVLLLERG 77 (571)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G 77 (571)
++|.|+ |..|..+|.+|++ |.+|+++.|.
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 788887 7889999999999 9999999765
No 499
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=51.66 E-value=9 Score=36.66 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=25.5
Q ss_pred EEEECC-CcchHHHHHhhcC-CCeEEEEecCC
Q 008281 49 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 78 (571)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (571)
++|.|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred EEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 889997 9999999999999 99999998653
No 500
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=51.65 E-value=9 Score=36.24 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=27.2
Q ss_pred ccEEEECCCcchHHHHHhhcC-CC-eEEEEecC
Q 008281 47 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 77 (571)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (571)
-.++|||+|-+|..+|..|.+ |. +|.|.-|-
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 359999999999999999999 85 79998765
Done!