BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008282
(571 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578951|ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
gi|223530132|gb|EEF32044.1| signal recognition particle protein, putative [Ricinus communis]
Length = 572
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/575 (85%), Positives = 525/575 (91%), Gaps = 7/575 (1%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNS--RISAGKSAKFVSSWAASSDPARLSSTSRNLFTRE 58
MEAVQ STVASRH+S TS T N+ + KF SSW S S +SRNLFTRE
Sbjct: 1 MEAVQLSTVASRHFSTTSLTLANTTTNLKLSNCNKFRSSWTGCSGTVA-SLSSRNLFTRE 59
Query: 59 TWGLINSKS--VTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRD 116
W +N KS VT+RR+ V+AEMFGQLT+GLE+AW+KLKG ETLTKENI EPMRD
Sbjct: 60 IWRWVNCKSSVVTLRRDFHS--AVKAEMFGQLTTGLESAWSKLKGAETLTKENIAEPMRD 117
Query: 117 IRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSEL 176
+RRALLEADVSLPVVRRFVQ+V+++A+GVGLIRGV+PDQQLVKIV DELVKLMGGEVSEL
Sbjct: 118 MRRALLEADVSLPVVRRFVQSVTDEAIGVGLIRGVKPDQQLVKIVHDELVKLMGGEVSEL 177
Query: 177 VFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQ 236
VFAK PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQ
Sbjct: 178 VFAKYSPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQ 237
Query: 237 VGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNP 296
VGVPVYT GTEVKPS+IAK+GLEEAKKKN+DVVIVDTAGRLQIDK MMDELK+VKRVLNP
Sbjct: 238 VGVPVYTEGTEVKPSEIAKRGLEEAKKKNIDVVIVDTAGRLQIDKGMMDELKEVKRVLNP 297
Query: 297 TEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG 356
TEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG
Sbjct: 298 TEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG 357
Query: 357 RGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFL 416
RGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAE++QKKIMSA FDFNDFL
Sbjct: 358 RGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFL 417
Query: 417 KQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAE 476
KQTR VARMGSM+RVIGMIPGMGK+TPAQ+REAEKSLKIME+MIEAMTPEEREKPELLAE
Sbjct: 418 KQTRAVARMGSMTRVIGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEEREKPELLAE 477
Query: 477 SPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQK 536
SP RRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PALSNLEDALK+EQK
Sbjct: 478 SPTRRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEDALKAEQK 537
Query: 537 APPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 571
APPGTARRKRRSESRRQF D AS+RPSPRGFG G+
Sbjct: 538 APPGTARRKRRSESRRQFADSASSRPSPRGFGSGN 572
>gi|359481606|ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Vitis vinifera]
gi|297740127|emb|CBI30309.3| unnamed protein product [Vitis vinifera]
Length = 567
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/568 (87%), Positives = 524/568 (92%), Gaps = 4/568 (0%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETW 60
MEAV FSTVASR +S+TS + + + +S SW AS P LSS RN FTRE W
Sbjct: 1 MEAVPFSTVASRPFSSTSPSLSTPKSLSRRSTNTRCSWTASKLPLPLSS--RNPFTREVW 58
Query: 61 GLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRA 120
L+ SKSV++RR + ++RAEMFGQLTSGLEAAW KLKGEE LTKENIVEPMRDIRRA
Sbjct: 59 SLVKSKSVSVRR--QMPGVIRAEMFGQLTSGLEAAWTKLKGEEVLTKENIVEPMRDIRRA 116
Query: 121 LLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK 180
LLEADVSLPVVRRFVQAVSEQAVGVGLIRGV+PDQQLVKIV DELVKLMGGEVSELVFAK
Sbjct: 117 LLEADVSLPVVRRFVQAVSEQAVGVGLIRGVKPDQQLVKIVHDELVKLMGGEVSELVFAK 176
Query: 181 SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVP 240
S PTVILLAGLQGVGKTTV AKLA YLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV VP
Sbjct: 177 SGPTVILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVDVP 236
Query: 241 VYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVL 300
VYTAGTEVKPSQIAKQGLEEA+KKN+DVVIVDTAGRLQIDKAMMDELKDVKR +NPTEVL
Sbjct: 237 VYTAGTEVKPSQIAKQGLEEARKKNIDVVIVDTAGRLQIDKAMMDELKDVKRAINPTEVL 296
Query: 301 LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 360
LVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER
Sbjct: 297 LVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 356
Query: 361 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 420
MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKIMSA FDFNDFLKQTR
Sbjct: 357 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTR 416
Query: 421 TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 480
VARMGSM+RV+GMIPGMGK+TPAQ+REAEKSLK+ME MIEAMTPEEREKPELLAESPVR
Sbjct: 417 AVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKMMEGMIEAMTPEEREKPELLAESPVR 476
Query: 481 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 540
RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PALSNLE+ LKSEQKAPPG
Sbjct: 477 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEETLKSEQKAPPG 536
Query: 541 TARRKRRSESRRQFVDPASTRPSPRGFG 568
TARRKRRSESR+QF +PAS+RPSPRGFG
Sbjct: 537 TARRKRRSESRKQFAEPASSRPSPRGFG 564
>gi|224138482|ref|XP_002322825.1| predicted protein [Populus trichocarpa]
gi|222867455|gb|EEF04586.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/574 (82%), Positives = 513/574 (89%), Gaps = 7/574 (1%)
Query: 1 MEAVQFSTVASRHYSATS-----KTF-YNSRISAGKSAKFVSSWAASSDPARLSSTSRNL 54
MEAVQ STVASRH+S S KT Y S + F SSW SS+ S +SRN
Sbjct: 1 MEAVQLSTVASRHFSTPSLSKNNKTLSYYSSCPGCSTKSFCSSWTGSSNNV-TSLSSRNS 59
Query: 55 FTRETWGLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM 114
FT+E W + KSV R +V+AEMFGQLTSGLE+AWNKLKGEE LTKENIVEPM
Sbjct: 60 FTKEMWRWVTCKSVVTFRREMGGGVVKAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPM 119
Query: 115 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 174
RDIRRALLEADVSLPVVRRFVQ+VS+QAVGVGL+RGV+PDQQLVKIV DELVKLMGGEVS
Sbjct: 120 RDIRRALLEADVSLPVVRRFVQSVSDQAVGVGLVRGVKPDQQLVKIVHDELVKLMGGEVS 179
Query: 175 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILG 234
ELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCML+AGDVYRPAAIDQLVILG
Sbjct: 180 ELVFAKSAPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLIAGDVYRPAAIDQLVILG 239
Query: 235 EQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 294
EQVGVPVYT GT+VKPS+IA++GL EAKKKN+DVVIVDTAGRLQIDK MMDELKDVK +L
Sbjct: 240 EQVGVPVYTEGTDVKPSEIARKGLSEAKKKNIDVVIVDTAGRLQIDKGMMDELKDVKLIL 299
Query: 295 NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKL 354
NPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKL
Sbjct: 300 NPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKL 359
Query: 355 VGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFND 414
VGRGERMEDLEPFYP+RMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKIMSANFDFND
Sbjct: 360 VGRGERMEDLEPFYPNRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSANFDFND 419
Query: 415 FLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELL 474
FLKQTR VA+MGSM+RVIGMIPGM K+TP QVREAEK+LKIMEAMIE MTPEEREKPELL
Sbjct: 420 FLKQTRAVAKMGSMTRVIGMIPGMAKVTPGQVREAEKNLKIMEAMIEVMTPEEREKPELL 479
Query: 475 AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSE 534
AESP RRKRVAQ SGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P+LSNLEDALK++
Sbjct: 480 AESPERRKRVAQASGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPSLSNLEDALKTK 539
Query: 535 QKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 568
QKAPPGTARR+R++ES ++FVD S+RP P GFG
Sbjct: 540 QKAPPGTARRRRKTESSKRFVDSVSSRPGPHGFG 573
>gi|449451269|ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
gi|449482550|ref|XP_004156318.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
Length = 572
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/575 (84%), Positives = 527/575 (91%), Gaps = 7/575 (1%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNSR-ISAGKSA--KFVSSWAASSDPARLSS-TSRNLFT 56
ME +Q STVASRH ++ S++ SR + G + K S ++ + L S +SRNLFT
Sbjct: 1 MEGLQISTVASRHLTSNSQSHCASRGLCHGSNCARKTSSISSSWLGSSNLKSLSSRNLFT 60
Query: 57 RETWGLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRD 116
RE WG +++K+V RR+ R +VRAEMFGQLTSGLEAAWNKLKGEE L+KENIVEPMRD
Sbjct: 61 REIWGWLHAKTVNTRRD--MRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRD 118
Query: 117 IRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSEL 176
IRRALLEADVSLPVVRRFVQAVS+QAVGVG+IRGVRPDQQLVKIV DELVKLMGGEVSEL
Sbjct: 119 IRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSEL 178
Query: 177 VFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQ 236
VF+KS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQ
Sbjct: 179 VFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQ 238
Query: 237 VGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNP 296
VGVPVYTAGTEVKPS IAKQGL+EA+K VDVVIVDTAGRLQID+AMMDELK+VKRV+NP
Sbjct: 239 VGVPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELKEVKRVINP 298
Query: 297 TEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG 356
TEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG
Sbjct: 299 TEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG 358
Query: 357 RGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFL 416
RGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA FDFNDFL
Sbjct: 359 RGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFL 418
Query: 417 KQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAE 476
KQTR VARMGSM+RVIGMIPGMGK+TPAQVREAEKSLKIME+MIEAMTPEEREKPELLAE
Sbjct: 419 KQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAE 478
Query: 477 SPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQK 536
SP RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PAL+NLE+ALK+EQK
Sbjct: 479 SPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQK 538
Query: 537 APPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 571
APPGTARRKRRSESR+QF + + TR SPRGFG G+
Sbjct: 539 APPGTARRKRRSESRKQFAN-SETRSSPRGFGSGN 572
>gi|356572574|ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/573 (82%), Positives = 510/573 (89%), Gaps = 16/573 (2%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNS---RISAGKSAKFVSSWAASSDPARLSSTSRNLFTR 57
MEAV SRH+S +F + R S+ KS K S W +S TS N F +
Sbjct: 1 MEAV----AGSRHFSTLPLSFSQNKTLRSSSAKSIKLSSPWTNAS------LTSPNCFAK 50
Query: 58 ETWGLINSKS--VTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMR 115
E WG +NS S V +RR+ R ++VRAEMFGQLTSGLE AWNKLKGEE L+KENIVEPMR
Sbjct: 51 EVWGWVNSNSKGVAVRRD-TRGVVVRAEMFGQLTSGLETAWNKLKGEEVLSKENIVEPMR 109
Query: 116 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE 175
DIRRALLEADVSLPVVRRFVQ+VS+QAVGVG+IRGVRPDQQLVKIV DELV+LMGGEVSE
Sbjct: 110 DIRRALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVRPDQQLVKIVHDELVRLMGGEVSE 169
Query: 176 LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 235
LVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQL ILG+
Sbjct: 170 LVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAILGK 229
Query: 236 QVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN 295
QV VPVYTAGT+VKPS+IAKQGLEEAKKK +DVVIVDTAGRLQIDK MMDELK+VK+ LN
Sbjct: 230 QVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELKEVKKALN 289
Query: 296 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 355
PTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV
Sbjct: 290 PTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 349
Query: 356 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDF 415
GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+QKKIMSA FDFNDF
Sbjct: 350 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSAKFDFNDF 409
Query: 416 LKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLA 475
LKQTRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L+ MEAMIEAMTPEEREKPELLA
Sbjct: 410 LKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLQNMEAMIEAMTPEEREKPELLA 469
Query: 476 ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQ 535
ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP LSNLE+ALK+E+
Sbjct: 470 ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLEEALKAEE 529
Query: 536 KAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 568
KAPPGTARR++RSESR F D RPSPRGFG
Sbjct: 530 KAPPGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|297810481|ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
gi|297318961|gb|EFH49383.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
Length = 562
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/571 (80%), Positives = 510/571 (89%), Gaps = 9/571 (1%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETW 60
MEA+QFS+ H+S + Y I + A F S++ +S+ A LSS RN TRE W
Sbjct: 1 MEALQFSS----HFSVSRVPNYTLGIRRSR-ATFSSAFTGTSNSASLSS--RNPSTREIW 53
Query: 61 GLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRA 120
+ SK+V R RR VRAEMFGQLT GLEAAW+KLKGEE LTKENI EPMRDIRRA
Sbjct: 54 SWVKSKTVGQGRY--RRSYVRAEMFGQLTGGLEAAWSKLKGEEVLTKENIAEPMRDIRRA 111
Query: 121 LLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK 180
LLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEVSEL FAK
Sbjct: 112 LLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAK 171
Query: 181 SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVP 240
S PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVILGEQVGVP
Sbjct: 172 SGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVP 231
Query: 241 VYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVL 300
VYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELKDVK+ LNPTEVL
Sbjct: 232 VYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVL 291
Query: 301 LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 360
LVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER
Sbjct: 292 LVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 351
Query: 361 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 420
MEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFNDFLKQTR
Sbjct: 352 MEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTR 411
Query: 421 TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 480
VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PELLAESP R
Sbjct: 412 AVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPELLAESPER 471
Query: 481 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 540
RKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LEDALK+EQKAPPG
Sbjct: 472 RKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPPG 531
Query: 541 TARRKRRSESRRQFVDPASTRPSPRGFGGGS 571
TARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 532 TARRKRKADSRKKFVESASSKPGPRGFGSGN 562
>gi|15237580|ref|NP_196014.1| signal recognition particle subunit [Arabidopsis thaliana]
gi|586038|sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein,
chloroplastic; Short=54 chloroplast protein; Short=54CP;
Short=SRP54; Short=cpSRP54; AltName: Full=FFC; Flags:
Precursor
gi|396701|emb|CAA79981.1| 54CP [Arabidopsis thaliana]
gi|7406404|emb|CAB85514.1| signal recognition particle 54CP protein precursor [Arabidopsis
thaliana]
gi|15293131|gb|AAK93676.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|24030445|gb|AAN41376.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|332003291|gb|AED90674.1| signal recognition particle subunit [Arabidopsis thaliana]
Length = 564
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/572 (80%), Positives = 510/572 (89%), Gaps = 9/572 (1%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETW 60
MEA+QFS+V T N RI A S+ F + + A LSS SRNL TRE W
Sbjct: 1 MEALQFSSV--NRVPCTLSCTGNRRIKAAFSSAFT---GGTINSASLSS-SRNLSTREIW 54
Query: 61 GLINSKSVTIRRNGR-RRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRR 119
+ SK+V +GR RR VRAEMFGQLT GLEAAW+KLKGEE LTK+NI EPMRDIRR
Sbjct: 55 SWVKSKTVV--GHGRYRRSQVRAEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRR 112
Query: 120 ALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA 179
ALLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEVSEL FA
Sbjct: 113 ALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFA 172
Query: 180 KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV 239
KS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVILGEQVGV
Sbjct: 173 KSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGV 232
Query: 240 PVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEV 299
PVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELKDVK+ LNPTEV
Sbjct: 233 PVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEV 292
Query: 300 LLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE 359
LLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE
Sbjct: 293 LLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE 352
Query: 360 RMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQT 419
RMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFNDFLKQT
Sbjct: 353 RMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQT 412
Query: 420 RTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV 479
R VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PELLAESP
Sbjct: 413 RAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPELLAESPE 472
Query: 480 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPP 539
RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LEDALK+EQKAPP
Sbjct: 473 RRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPP 532
Query: 540 GTARRKRRSESRRQFVDPASTRPSPRGFGGGS 571
GTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 533 GTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|440583671|emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
angustifolius]
Length = 731
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/587 (80%), Positives = 522/587 (88%), Gaps = 24/587 (4%)
Query: 1 MEAVQFSTVASRHYS---ATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTR 57
MEA+ FSTVASRH+S + ++TF +S S K K SSW SS SS+ NLFT
Sbjct: 1 MEALHFSTVASRHFSISLSHNRTFSSSAYSTHKPTKLSSSWTGSS----FSSSRNNLFTN 56
Query: 58 ETWGLINSKSVTIRRNGRRRL--IVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMR 115
E WG +NSKSV++RR R L +VRAEMFGQLTSGLEAAW+K+KGEE LTKENIVEPMR
Sbjct: 57 EIWGWVNSKSVSLRR-CRDILPGMVRAEMFGQLTSGLEAAWSKVKGEELLTKENIVEPMR 115
Query: 116 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE 175
DIRRALLEADVSLPVVRRFVQAV++QAVG+G+IRGVRPDQQLVKIV DELVKLMGGE SE
Sbjct: 116 DIRRALLEADVSLPVVRRFVQAVTDQAVGLGVIRGVRPDQQLVKIVHDELVKLMGGEFSE 175
Query: 176 LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 235
LVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQL ILG+
Sbjct: 176 LVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAILGK 235
Query: 236 QVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN 295
QV VPVYTAGT+VKPS+IA+QGLEEAKKKN+DVV+VDTAGRLQI+K+MMDELK+VK+VLN
Sbjct: 236 QVDVPVYTAGTDVKPSEIARQGLEEAKKKNIDVVVVDTAGRLQINKSMMDELKEVKQVLN 295
Query: 296 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 355
PTE+LLVVDAMTGQEAAALVTTFN+EIGITGAIL+KLDGDSRGGAALSVKEVSGKPIKLV
Sbjct: 296 PTEILLVVDAMTGQEAAALVTTFNLEIGITGAILSKLDGDSRGGAALSVKEVSGKPIKLV 355
Query: 356 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDF 415
GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEK++EVMQQEDAEE+QKKIMSA FDFNDF
Sbjct: 356 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKSKEVMQQEDAEELQKKIMSAKFDFNDF 415
Query: 416 LKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLA 475
LKQTR+VARMGS+SRVIGMIPGM K+TPAQ+R+AEK+L+I EAMIEAMTPEEREKPELLA
Sbjct: 416 LKQTRSVARMGSVSRVIGMIPGMAKVTPAQIRDAEKNLQITEAMIEAMTPEEREKPELLA 475
Query: 476 ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQ 535
ESP RRKRVAQDSGKTEQQVSQLVAQ+FQMRVRMKNL+GVMEGGS+PALSNLE++LK+E+
Sbjct: 476 ESPERRKRVAQDSGKTEQQVSQLVAQIFQMRVRMKNLLGVMEGGSMPALSNLEESLKTEE 535
Query: 536 K--------------APPGTARRKRRSESRRQFVDPASTRPSPRGFG 568
K APPGTARR+RR ESR+QF + S RP RGF
Sbjct: 536 KIQNLDAYLFLHSCQAPPGTARRRRRPESRKQFANSTSARPDARGFA 582
>gi|3746964|gb|AAC64139.1| signal recognition particle 54 kDa subunit precursor [Arabidopsis
thaliana]
Length = 564
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/572 (80%), Positives = 509/572 (88%), Gaps = 9/572 (1%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETW 60
MEA+QFS+V T N RI A S+ F + + A LSS SRNL TRE W
Sbjct: 1 MEALQFSSV--NRVPCTLSCTGNRRIKAAFSSAFT---GGTINSASLSS-SRNLSTREIW 54
Query: 61 GLINSKSVTIRRNGR-RRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRR 119
+ SK+V +GR RR VRA MFGQLT GLEAAW+KLKGEE LTK+NI EPMRDIRR
Sbjct: 55 SWVKSKTVV--GHGRYRRSQVRAVMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRR 112
Query: 120 ALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA 179
ALLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEVSEL FA
Sbjct: 113 ALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFA 172
Query: 180 KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV 239
KS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVILGEQVGV
Sbjct: 173 KSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGV 232
Query: 240 PVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEV 299
PVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELKDVK+ LNPTEV
Sbjct: 233 PVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEV 292
Query: 300 LLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE 359
LLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE
Sbjct: 293 LLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE 352
Query: 360 RMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQT 419
RMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFNDFLKQT
Sbjct: 353 RMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQT 412
Query: 420 RTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV 479
R VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PELLAESP
Sbjct: 413 RAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPELLAESPE 472
Query: 480 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPP 539
RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LEDALK+EQKAPP
Sbjct: 473 RRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPP 532
Query: 540 GTARRKRRSESRRQFVDPASTRPSPRGFGGGS 571
GTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 533 GTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|356505382|ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/570 (82%), Positives = 508/570 (89%), Gaps = 10/570 (1%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETW 60
MEAV S H+S S +F +++ SAK S SS S +SRN F +E W
Sbjct: 1 MEAV----TGSHHFSTLSLSFSHNKTLRSSSAK---SIRLSSPSTNASLSSRNWFAKEVW 53
Query: 61 GLINSKS--VTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIR 118
G +NS S V +RR R ++VRAEMFGQLTSGLE AWNKLKGEE L+KENIVEPMRDIR
Sbjct: 54 GWVNSNSKGVAVRRY-TRGVVVRAEMFGQLTSGLETAWNKLKGEEVLSKENIVEPMRDIR 112
Query: 119 RALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVF 178
RALLEADVSLPVVRRFVQ+VS+QAVGVG+IRGVRPDQQLVKIV +ELV+LMGGEVSELVF
Sbjct: 113 RALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVRPDQQLVKIVHEELVQLMGGEVSELVF 172
Query: 179 AKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 238
AKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQL ILG+QV
Sbjct: 173 AKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAILGKQVD 232
Query: 239 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 298
VPVYTAGT+VKPS+IAKQGLEEAKKK +DVVIVDTAGRLQIDK MMDELK+VK+ LNPTE
Sbjct: 233 VPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELKEVKKALNPTE 292
Query: 299 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 358
VLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 293 VLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 352
Query: 359 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 418
ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+QKKIMSA FDFNDFLKQ
Sbjct: 353 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSAKFDFNDFLKQ 412
Query: 419 TRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESP 478
TRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L MEAMIEAMTPEEREKPELLAESP
Sbjct: 413 TRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLLNMEAMIEAMTPEEREKPELLAESP 472
Query: 479 VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAP 538
VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP LSNLE+ALK+E+KAP
Sbjct: 473 VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLEEALKAEEKAP 532
Query: 539 PGTARRKRRSESRRQFVDPASTRPSPRGFG 568
PGTARR++RSESR F D RPSPRGFG
Sbjct: 533 PGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|357511109|ref|XP_003625843.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355500858|gb|AES82061.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 553
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/518 (85%), Positives = 486/518 (93%), Gaps = 2/518 (0%)
Query: 52 RNLFTRETWGLINSKSVTIRR-NGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENI 110
RN F +E WG + SKSVT+RR + R ++VRAEMFGQLT+GLE+AWNKLKGEE LTK+NI
Sbjct: 34 RNSFAKEIWGFVQSKSVTMRRMDMIRPVVVRAEMFGQLTTGLESAWNKLKGEEVLTKDNI 93
Query: 111 VEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMG 170
VEPMRDIRRALLEADVSLPVVRRFVQ+V++QAVGVG+ RGV+PDQQLVKIV DELV+LMG
Sbjct: 94 VEPMRDIRRALLEADVSLPVVRRFVQSVTDQAVGVGVTRGVKPDQQLVKIVHDELVQLMG 153
Query: 171 GEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 230
GEVSEL FAK+ PTVILLAGLQGVGKTTV AKLANY KKQGKSCMLVAGDVYRPAAIDQL
Sbjct: 154 GEVSELTFAKTGPTVILLAGLQGVGKTTVCAKLANYFKKQGKSCMLVAGDVYRPAAIDQL 213
Query: 231 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 290
ILG+QV VPVYTAGT+VKPS IAKQG EEAKKK +DVVIVDTAGRLQIDKAMMDELKDV
Sbjct: 214 TILGKQVDVPVYTAGTDVKPSDIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELKDV 273
Query: 291 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 350
KRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGK
Sbjct: 274 KRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGK 333
Query: 351 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 410
PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSA F
Sbjct: 334 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSAKF 393
Query: 411 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREK 470
DFNDFLKQTR VA+MGS+SRVIGMIPGM K+TPAQ+REAE++L+IME +I+AMTPEEREK
Sbjct: 394 DFNDFLKQTRAVAQMGSVSRVIGMIPGMAKVTPAQIREAERNLEIMEVIIKAMTPEEREK 453
Query: 471 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDA 530
PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P LSNLE+A
Sbjct: 454 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLEEA 513
Query: 531 LKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 568
LK+E+KAPPGTARR++++ESRR F D ++ R PRGFG
Sbjct: 514 LKTEEKAPPGTARRRKKAESRRLFAD-STLRQPPRGFG 550
>gi|224088549|ref|XP_002308469.1| predicted protein [Populus trichocarpa]
gi|222854445|gb|EEE91992.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/541 (83%), Positives = 483/541 (89%), Gaps = 5/541 (0%)
Query: 1 MEAVQFSTVASRHYSATS-----KTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLF 55
MEAVQFSTVASRH+S S K+F + SA+ S S S +SRN F
Sbjct: 1 MEAVQFSTVASRHFSTPSFARNNKSFSYYSSCSRNSARSSCSSWTGSSNNVTSLSSRNSF 60
Query: 56 TRETWGLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMR 115
TRE W +N KSV +++AEMFGQLTSGLE+AWNKLKGEE LTKENI EPMR
Sbjct: 61 TREIWRWVNCKSVVTLGREMGGGVIKAEMFGQLTSGLESAWNKLKGEEVLTKENIAEPMR 120
Query: 116 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE 175
DIRRALLEADVSLPVVRRFVQ+V +QAVGVGLIRGV+PDQQ VKIVRDELVKLMGGEVSE
Sbjct: 121 DIRRALLEADVSLPVVRRFVQSVGDQAVGVGLIRGVKPDQQFVKIVRDELVKLMGGEVSE 180
Query: 176 LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 235
LVFAKS PTVILLAGLQGVGKTT+ AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE
Sbjct: 181 LVFAKSGPTVILLAGLQGVGKTTICAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 240
Query: 236 QVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN 295
QVGV VYT GT+VKPS+IA++GL EAKKKN+DVVIVDTAGRLQIDKAMMDELKDVKRVLN
Sbjct: 241 QVGVSVYTEGTDVKPSEIARKGLAEAKKKNIDVVIVDTAGRLQIDKAMMDELKDVKRVLN 300
Query: 296 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 355
PTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKE+SGKPIKLV
Sbjct: 301 PTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEISGKPIKLV 360
Query: 356 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDF 415
GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSANFDFNDF
Sbjct: 361 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSANFDFNDF 420
Query: 416 LKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLA 475
LKQTR VA+MGSM+RV+GMIPGM K+TPAQ+REAEKSLKIME MIEAMTPEEREKPELLA
Sbjct: 421 LKQTRAVAKMGSMTRVLGMIPGMAKVTPAQIREAEKSLKIMEGMIEAMTPEEREKPELLA 480
Query: 476 ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQ 535
ESP RRKR+AQ SGKTEQQVSQLVAQLFQMRVRMKNLMG M+GGS+P+LSNLEDALK+EQ
Sbjct: 481 ESPQRRKRIAQASGKTEQQVSQLVAQLFQMRVRMKNLMGAMDGGSIPSLSNLEDALKTEQ 540
Query: 536 K 536
K
Sbjct: 541 K 541
>gi|3746903|gb|AAC64109.1| signal recognition particle 54 kDa subunit precursor [Pisum
sativum]
Length = 525
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/521 (82%), Positives = 468/521 (89%), Gaps = 5/521 (0%)
Query: 51 SRNLFTRETWGLINSKSVTIRRNGR-RRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKEN 109
+RN F RE WGL+ SKS+T RR R ++VRAEMFGQLTSGLE+AWNKLK EE LTKEN
Sbjct: 4 TRNSFAREIWGLVQSKSLTSRRTDMIRPVVVRAEMFGQLTSGLESAWNKLKREEVLTKEN 63
Query: 110 IVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLM 169
IVEPMRDIRRA ADVSLPVVRRFVQ+V+++AVGVG+ RGV+PDQQLVKIV DELV+LM
Sbjct: 64 IVEPMRDIRRA--RADVSLPVVRRFVQSVTDKAVGVGVTRGVKPDQQLVKIVHDELVQLM 121
Query: 170 GGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 229
GGEVSEL FA S PTVILLAGLQGVGKTTV AKLA Y KKQGKSCMLVAGDVYRPAAID
Sbjct: 122 GGEVSELTFANSGPTVILLAGLQGVGKTTVCAKLATYFKKQGKSCMLVAGDVYRPAAIDX 181
Query: 230 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 289
L ILG+QV VPVY AGT+VKPS IAKQG EEAKKK +DVVIVDTAG LQIDKAMMDELK+
Sbjct: 182 LTILGKQVDVPVYAAGTDVKPSVIAKQGFEEAKKKKIDVVIVDTAGSLQIDKAMMDELKE 241
Query: 290 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 349
VK+VLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSG
Sbjct: 242 VKQVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSG 301
Query: 350 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 409
KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM +EDAE+MQKKIMSA
Sbjct: 302 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMLEEDAEDMQKKIMSAK 361
Query: 410 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 469
FDFND LKQTRTVA+MGS+SRV+GMIPGM K+TPAQ+REAEK+L+ ME +IEAMTPEER
Sbjct: 362 FDFNDLLKQTRTVAKMGSVSRVLGMIPGMAKVTPAQIREAEKNLQFMEVIIEAMTPEERG 421
Query: 470 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLED 529
KPELLAE PVRRK VAQ+SGKTEQQVSQLVAQLFQMRVRMK LMGVMEGGS+P LSNLE+
Sbjct: 422 KPELLAEFPVRRKSVAQESGKTEQQVSQLVAQLFQMRVRMKKLMGVMEGGSMPTLSNLEE 481
Query: 530 ALKSEQKAPPGTARRKRRSESRRQFVDPAS--TRPSPRGFG 568
ALK+ +KAPPGTARRK++ +R F +S + P+PRGFG
Sbjct: 482 ALKANKKAPPGTARRKKKGGLKRLFKGRSSKISLPAPRGFG 522
>gi|148906612|gb|ABR16458.1| unknown [Picea sitchensis]
Length = 573
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/574 (68%), Positives = 464/574 (80%), Gaps = 27/574 (4%)
Query: 6 FSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRET------ 59
F T S H+ N IS F W S+ SS+S LF +E
Sbjct: 13 FPTQFSYHHHGAC----NFNISNPNPNSF---WRGSTLSVGFSSSS--LFQKEKCLELIH 63
Query: 60 ----WGLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMR 115
WGL+N RR +VRAEMFGQLT+ LEAAW+KL ++ LT+EN+ EPMR
Sbjct: 64 CQTKWGLVN------RRIRHGSDLVRAEMFGQLTTSLEAAWSKLSKQDVLTRENMAEPMR 117
Query: 116 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE 175
DIRRALLEADVSLPVVRRFV+ V+EQA+GVG++ GVR DQQLVK+V DELVKLMGGEV+E
Sbjct: 118 DIRRALLEADVSLPVVRRFVKVVTEQAIGVGVVPGVRSDQQLVKVVNDELVKLMGGEVAE 177
Query: 176 LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 235
L FAK+ PTVIL+AGLQGVGKTT AKLA YLKK+GK+CMLVA DVYRPAAIDQLVILG+
Sbjct: 178 LDFAKTGPTVILMAGLQGVGKTTACAKLALYLKKKGKNCMLVAADVYRPAAIDQLVILGK 237
Query: 236 QVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN 295
QV VPVY AGT+V P +IAKQGLEEAKKK++DVVIVDTAGRLQ+DK+MMDELK VK+ +N
Sbjct: 238 QVEVPVYEAGTKVTPMEIAKQGLEEAKKKDMDVVIVDTAGRLQVDKSMMDELKQVKQAMN 297
Query: 296 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 355
PTEVLLVVDAMTGQEAAALV FN+EIGITGAILTKLDGDSRGGAALSV+EVSGKPIK V
Sbjct: 298 PTEVLLVVDAMTGQEAAALVAAFNLEIGITGAILTKLDGDSRGGAALSVREVSGKPIKFV 357
Query: 356 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDF 415
G+GERMEDLEPFYPDRMA RILGMGDVLSFVEKAQ+VM++E+AEE+QKKIM + FDFNDF
Sbjct: 358 GQGERMEDLEPFYPDRMASRILGMGDVLSFVEKAQQVMKEEEAEELQKKIMESKFDFNDF 417
Query: 416 LKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLA 475
LKQTR +ARMGSM+RVIGMIPGMGK++ AQ+R+AEKSL+I+E+MI AMT EER PELLA
Sbjct: 418 LKQTRVIARMGSMNRVIGMIPGMGKVSSAQIRDAEKSLRIVESMINAMTEEERANPELLA 477
Query: 476 ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQ 535
+SP RR+++A DSG++EQQVSQL+AQLFQMR MKN+MG M+GG+ P + NLE+ALK Q
Sbjct: 478 QSPARRRKIAVDSGRSEQQVSQLIAQLFQMRAGMKNMMGAMQGGT-PGIDNLEEALKVSQ 536
Query: 536 KAPPGTA-RRKRRSESRRQFVDPASTRPSPRGFG 568
K PPG A RRK R+ ++Q + AS + +PRGFG
Sbjct: 537 KVPPGMAKRRKNRTNLKKQLTNTASLQDTPRGFG 570
>gi|222615533|gb|EEE51665.1| hypothetical protein OsJ_33001 [Oryza sativa Japonica Group]
Length = 550
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/477 (80%), Positives = 429/477 (89%), Gaps = 1/477 (0%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G + LTKENIVEPMRDIRRALLEADVSLPVVRRFV +
Sbjct: 65 LVVRAEMFGQLTTGLESAWNKLRGVDVLTKENIVEPMRDIRRALLEADVSLPVVRRFVSS 124
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
+SE+A+G LIRGVRP+QQLVKIV DELVKLMGGEVS+LVFAKS PTVILLAGLQGVGKT
Sbjct: 125 ISEKALGSDLIRGVRPEQQLVKIVHDELVKLMGGEVSDLVFAKSGPTVILLAGLQGVGKT 184
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
TV AKLA YLKK GKSCMLVA DVYRPAAIDQL ILGEQVGVPVY+ GTE KP+QI K
Sbjct: 185 TVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTILGEQVGVPVYSEGTEAKPAQITKNA 244
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
+EEAK+KN+D +++DTAGRLQIDK+MM ELK+VK+ +NPTEVLLVVDAMTGQEAAALVTT
Sbjct: 245 VEEAKRKNIDAIVMDTAGRLQIDKSMMVELKEVKKAVNPTEVLLVVDAMTGQEAAALVTT 304
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK VGRGERMEDLE FYPDRMA R+L
Sbjct: 305 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVL 364
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEKAQEVM+QEDA E+QKKIMSA FDFNDFLKQ++ VA+MGSMSRV+GMIPG
Sbjct: 365 GMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMIPG 424
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M K+TPAQ+REAEK L +E+MI AMT EEREKPELLAES RR RVA++SGK+EQ+VSQ
Sbjct: 425 MNKVTPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRDRRIRVAEESGKSEQEVSQ 484
Query: 498 LVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 553
LVAQLFQMR +M+ LMGVM G +LP + NL ++L +++KAPPGTARRKRR RQ
Sbjct: 485 LVAQLFQMRAQMQKLMGVMTGQEALPGMGNLMESLNADEKAPPGTARRKRRHSKTRQ 541
>gi|218185264|gb|EEC67691.1| hypothetical protein OsI_35150 [Oryza sativa Indica Group]
Length = 550
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/477 (79%), Positives = 427/477 (89%), Gaps = 1/477 (0%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G + LTKENIVEPMRDIRRALLEADVSLPVVRRFV +
Sbjct: 65 LVVRAEMFGQLTTGLESAWNKLRGVDVLTKENIVEPMRDIRRALLEADVSLPVVRRFVSS 124
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
+SE+A+G LIRGVRP+QQLVKIV DELV+LMGGEVS+LVFAKS PTVILLAGLQGVGKT
Sbjct: 125 ISEKALGSDLIRGVRPEQQLVKIVHDELVQLMGGEVSDLVFAKSGPTVILLAGLQGVGKT 184
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
TV AKLA YLKK GKSCMLVA DVYRPAAIDQL ILGEQVGVPVY+ TE KP+QI K
Sbjct: 185 TVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTILGEQVGVPVYSERTEAKPAQITKNA 244
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
+EEAK+KN+D +++DTAGRLQIDK+MM ELK+VK+ +NPTEVLLVVDAMTGQEAAALVTT
Sbjct: 245 VEEAKRKNIDAIVMDTAGRLQIDKSMMVELKEVKKAVNPTEVLLVVDAMTGQEAAALVTT 304
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK VGRGERMEDLE FYPDRMA R+L
Sbjct: 305 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVL 364
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEKAQEVM+QEDA E+QKKIMSA FDFNDFLKQ++ VA+MGSMSRV+GMIPG
Sbjct: 365 GMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMIPG 424
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M K+TPAQ+REAEK L +E+MI AMT EEREKPELLAES RR RVA++SGK+E +VSQ
Sbjct: 425 MNKVTPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRDRRIRVAEESGKSEHEVSQ 484
Query: 498 LVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 553
LVAQLFQMR +M+ LMGVM G +LP + NL ++L +++KAPPGTARRKRR RQ
Sbjct: 485 LVAQLFQMRAQMQKLMGVMTGQEALPGMGNLMESLNADEKAPPGTARRKRRHSKTRQ 541
>gi|413924904|gb|AFW64836.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 545
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/477 (78%), Positives = 428/477 (89%), Gaps = 1/477 (0%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G LTKENI EPMRDIRRALLEADVSLPVVRRFV +
Sbjct: 61 LVVRAEMFGQLTTGLESAWNKLRGVGVLTKENIAEPMRDIRRALLEADVSLPVVRRFVSS 120
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
VS++A+G IRGVRPDQQLVKIV DELV+LMGGEVS++VFAKS PTVILLAGLQGVGKT
Sbjct: 121 VSDKALGANAIRGVRPDQQLVKIVHDELVQLMGGEVSDIVFAKSGPTVILLAGLQGVGKT 180
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
TV AKLA YLKK GKSCMLVA D+YRPAAIDQL ILG+QVGVPVY+ GTE KP+QI K
Sbjct: 181 TVCAKLAFYLKKLGKSCMLVAADIYRPAAIDQLTILGKQVGVPVYSEGTEAKPTQITKNA 240
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
+EEAK KN+D ++VDTAGRLQID++MMDELK+VK+ +NPTEVLLVVDAMTGQEAAALVTT
Sbjct: 241 MEEAKSKNIDAIVVDTAGRLQIDRSMMDELKEVKKAVNPTEVLLVVDAMTGQEAAALVTT 300
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FNIEIGITGAILTKLDGDSRGGAALSVKEVSG+PIK VGRGER+EDLE FYPDRMA R+L
Sbjct: 301 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKFVGRGERLEDLELFYPDRMAQRVL 360
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEK QEVM+QE+A E+QKKIMSA FDFNDFLKQ++ VA+MGSMSR+IGM+PG
Sbjct: 361 GMGDVLSFVEKTQEVMRQEEAIELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRIIGMMPG 420
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M KITPAQ+REAEK L +E+MI AMT EEREKPELLAES RR RVA++SGKTEQ+VSQ
Sbjct: 421 MNKITPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRERRIRVAEESGKTEQEVSQ 480
Query: 498 LVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 553
LVAQLFQMR +M+ LMG+++G ++ + +L D+LKSE+KAPPGTARRKRR+ + +Q
Sbjct: 481 LVAQLFQMRAQMQKLMGMVQGQEAIAGMGDLMDSLKSEEKAPPGTARRKRRNNTSKQ 537
>gi|242084798|ref|XP_002442824.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
gi|241943517|gb|EES16662.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
Length = 559
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/476 (77%), Positives = 426/476 (89%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G + LTKENI EPMRDIRRALLEADVSLPVVRRF+++
Sbjct: 72 LVVRAEMFGQLTTGLESAWNKLRGVDILTKENIAEPMRDIRRALLEADVSLPVVRRFIES 131
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
VSE+AVG +IRGVRPDQQLVK+V DELV+LMGGEVS+LVFAKS PT+ILLAGLQGVGKT
Sbjct: 132 VSEKAVGTDVIRGVRPDQQLVKVVNDELVQLMGGEVSDLVFAKSGPTIILLAGLQGVGKT 191
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
TV AKLA YLKK GKSCMLVA DVYRPAAIDQL ILG++VGVPVY+ GTE KPSQIAK G
Sbjct: 192 TVCAKLAFYLKKMGKSCMLVAADVYRPAAIDQLTILGKKVGVPVYSEGTEAKPSQIAKNG 251
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
L+EAK DV+IVDTAGRLQ+DK+MM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++
Sbjct: 252 LKEAKVNKADVIIVDTAGRLQVDKSMMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSS 311
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FN EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK VG+GER+EDLEPFYPDRMA RIL
Sbjct: 312 FNDEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRIL 371
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPG
Sbjct: 372 GMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQMIAQMGSFSRLIGMIPG 431
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M K+TPAQ+REAEK+LK ME+MI MTPEERE+PELLAES RRKRVA+DSGKTEQQV Q
Sbjct: 432 MNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRKRVAKDSGKTEQQVGQ 491
Query: 498 LVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 553
LVAQLFQMR +M+ +MG ++G P + L +++K+E++A GT RR+R+ + RQ
Sbjct: 492 LVAQLFQMRAKMQKMMGAIQGKESPDMDELMESMKAEEQAAAGTGRRRRKYGNLRQ 547
>gi|226501792|ref|NP_001142003.1| uncharacterized protein LOC100274153 [Zea mays]
gi|194706754|gb|ACF87461.1| unknown [Zea mays]
gi|413916134|gb|AFW56066.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 556
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/476 (77%), Positives = 425/476 (89%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G + LTKENI EPMRDIRRALLEADVSLPVVRRF+++
Sbjct: 69 LVVRAEMFGQLTTGLESAWNKLRGVDVLTKENIAEPMRDIRRALLEADVSLPVVRRFIES 128
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
VSE+AVG +IRGVRPDQQLVK+V DELV+LMGGEVS+LVFAKS PT+ILLAGLQGVGKT
Sbjct: 129 VSEKAVGTDVIRGVRPDQQLVKVVSDELVQLMGGEVSDLVFAKSGPTIILLAGLQGVGKT 188
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
TV AKLA YLKK GKSCMLVA DVYRPAAIDQL ILG++VGVPVY+ GTE KPSQIAK G
Sbjct: 189 TVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTILGKKVGVPVYSEGTEAKPSQIAKNG 248
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
L+EAK DV+IVDTAGRLQ+DKAMM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++
Sbjct: 249 LKEAKVNKADVIIVDTAGRLQVDKAMMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSS 308
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FN EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK VG+GER+EDLEPFYPDRMA RIL
Sbjct: 309 FNDEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRIL 368
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEKAQEVM+QEDA+E+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPG
Sbjct: 369 GMGDVLSFVEKAQEVMRQEDADELQKKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMIPG 428
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M K+TPAQ+REAEK+LK ME+MI MT EERE+PELLAES RRKRVA+DSGKTEQQVSQ
Sbjct: 429 MNKVTPAQIREAEKNLKFMESMINVMTLEERERPELLAESRERRKRVAKDSGKTEQQVSQ 488
Query: 498 LVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 553
LVAQLFQMR +M+ +MG M+G P + L ++K+E+++ GT RR+R+ + RQ
Sbjct: 489 LVAQLFQMRAKMQKMMGAMQGKESPDMDELMGSMKAEEQSAAGTGRRRRKYGNLRQ 544
>gi|218185265|gb|EEC67692.1| hypothetical protein OsI_35151 [Oryza sativa Indica Group]
Length = 557
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/480 (76%), Positives = 429/480 (89%), Gaps = 1/480 (0%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G + LTK+NI EPMRDIRRALLEADVSLPVVR F+++
Sbjct: 70 LVVRAEMFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALLEADVSLPVVRSFIES 129
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
V+E+AVG +IRGV+P+QQLVK+V DELV+LMGGEVS+LVFAK+ PTVILLAGLQGVGKT
Sbjct: 130 VTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEVSDLVFAKTAPTVILLAGLQGVGKT 189
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
TV AKLA YLKK GKSCML+A DVYRPAAIDQL ILG+QVGVPVY+ GTE KPSQIAK G
Sbjct: 190 TVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPSQIAKNG 249
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
++EAK K DV+IVDTAGRLQ+DKAMM ELK+VKR +NPTEVLLVVDAMTGQEAA+LV+T
Sbjct: 250 IKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVST 309
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FN+EIGITGAILTKLDGDSRGGAALS+KEVSGKPIK VGRGERMEDLEPFYPDRMA RIL
Sbjct: 310 FNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRIL 369
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPG
Sbjct: 370 GMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPG 429
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M K+TPAQ+REAEK+LK ME+MI MTPEERE+PELLAES RR RVA++SGK E+QVSQ
Sbjct: 430 MNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKESGKNERQVSQ 489
Query: 498 LVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSES-RRQFVD 556
LVAQLF+MR +M+ +MG M+G P + L D++K+E++A GT +R+R+ + RR+ +D
Sbjct: 490 LVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKAEEQAAAGTGKRRRKYGNLRRRDLD 549
>gi|115484239|ref|NP_001065781.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|62701662|gb|AAX92735.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
gi|108864005|gb|ABG22368.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113644485|dbj|BAF27626.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|215765043|dbj|BAG86740.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615534|gb|EEE51666.1| hypothetical protein OsJ_33002 [Oryza sativa Japonica Group]
Length = 557
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/480 (76%), Positives = 429/480 (89%), Gaps = 1/480 (0%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G + LTK+NI EPMRDIRRALLEADVSLPVVR F+++
Sbjct: 70 LVVRAEMFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALLEADVSLPVVRSFIES 129
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
V+E+AVG +IRGV+P+QQLVK+V DELV+LMGGEVS+LVFAK+ PTVILLAGLQGVGKT
Sbjct: 130 VTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEVSDLVFAKTAPTVILLAGLQGVGKT 189
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
TV AKLA YLKK GKSCML+A DVYRPAAIDQL ILG+QVGVPVY+ GTE KPSQIAK G
Sbjct: 190 TVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPSQIAKNG 249
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
++EAK K DV+IVDTAGRLQ+DKAMM ELK+VKR +NPTEVLLVVDAMTGQEAA+LV+T
Sbjct: 250 IKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVST 309
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FN+EIGITGAILTKLDGDSRGGAALS+KEVSGKPIK VGRGERMEDLEPFYPDRMA RIL
Sbjct: 310 FNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRIL 369
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPG
Sbjct: 370 GMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPG 429
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M K+TPAQ+REAEK+LK ME+MI MTPEERE+PELLAES RR RVA++SGK E+QVSQ
Sbjct: 430 MNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKESGKNERQVSQ 489
Query: 498 LVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSES-RRQFVD 556
LVAQLF+MR +M+ +MG M+G P + L D++K+E++A GT +R+R+ + RR+ +D
Sbjct: 490 LVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKAEEQAAAGTGKRRRKYGNLRRRDLD 549
>gi|413924903|gb|AFW64835.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 486
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/478 (76%), Positives = 422/478 (88%), Gaps = 8/478 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVS-------LPVVRRFVQ 136
MFGQLT+GLE+AWNKL+G LTKENI EPMRDIRRALLEADVS LPVVRRFV
Sbjct: 1 MFGQLTTGLESAWNKLRGVGVLTKENIAEPMRDIRRALLEADVSSLHFQVSLPVVRRFVS 60
Query: 137 AVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGK 196
+VS++A+G IRGVRPDQQLVKIV DELV+LMGGEVS++VFAKS PTVILLAGLQGVGK
Sbjct: 61 SVSDKALGANAIRGVRPDQQLVKIVHDELVQLMGGEVSDIVFAKSGPTVILLAGLQGVGK 120
Query: 197 TTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQ 256
TTV AKLA YLKK GKSCMLVA D+YRPAAIDQL ILG+QVGVPVY+ GTE KP+QI K
Sbjct: 121 TTVCAKLAFYLKKLGKSCMLVAADIYRPAAIDQLTILGKQVGVPVYSEGTEAKPTQITKN 180
Query: 257 GLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVT 316
+EEAK KN+D ++VDTAGRLQID++MMDELK+VK+ +NPTEVLLVVDAMTGQEAAALVT
Sbjct: 181 AMEEAKSKNIDAIVVDTAGRLQIDRSMMDELKEVKKAVNPTEVLLVVDAMTGQEAAALVT 240
Query: 317 TFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRI 376
TFNIEIGITGAILTKLDGDSRGGAALSVKEVSG+PIK VGRGER+EDLE FYPDRMA R+
Sbjct: 241 TFNIEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKFVGRGERLEDLELFYPDRMAQRV 300
Query: 377 LGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP 436
LGMGDVLSFVEK QEVM+QE+A E+QKKIMSA FDFNDFLKQ++ VA+MGSMSR+IGM+P
Sbjct: 301 LGMGDVLSFVEKTQEVMRQEEAIELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRIIGMMP 360
Query: 437 GMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVS 496
GM KITPAQ+REAEK L +E+MI AMT EEREKPELLAES RR RVA++SGKTEQ+VS
Sbjct: 361 GMNKITPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRERRIRVAEESGKTEQEVS 420
Query: 497 QLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 553
QLVAQLFQMR +M+ LMG+++G ++ + +L D+LKSE+KAPPGTARRKRR+ + +Q
Sbjct: 421 QLVAQLFQMRAQMQKLMGMVQGQEAIAGMGDLMDSLKSEEKAPPGTARRKRRNNTSKQ 478
>gi|108864006|gb|ABG22369.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
Length = 482
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/485 (74%), Positives = 427/485 (88%), Gaps = 7/485 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MFGQLT+GLE+AWNKL+G + LTK+NI EPMRDIRRALLEADVSLPVVR F+++V+E+AV
Sbjct: 1 MFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALLEADVSLPVVRSFIESVTEKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV+P+QQLVK+V DELV+LMGGEVS+LVFAK+ PTVILLAGLQGVGKTTV AKL
Sbjct: 61 GTDVIRGVKPEQQLVKVVNDELVQLMGGEVSDLVFAKTAPTVILLAGLQGVGKTTVCAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YLKK GKSCML+A DVYRPAAIDQL ILG+QVGVPVY+ GTE KPSQIAK G++EAK
Sbjct: 121 AYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPSQIAKNGIKEAKS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K DV+IVDTAGRLQ+DKAMM ELK+VKR +NPTEVLLVVDAMTGQEAA+LV+TFN+EIG
Sbjct: 181 KKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALS+KEVSGKPIK VGRGERMEDLEPFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
SFVEKAQEVM+QEDAEE+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TP
Sbjct: 301 SFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTP 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
AQ+REAEK+LK ME+MI MTPEERE+PELLAES RR RVA++SGK E+QVSQLVAQLF
Sbjct: 361 AQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKESGKNERQVSQLVAQLF 420
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSES-RRQFVDPASTRP 562
+MR +M+ +MG M+G P + L D++K+E++A GT +R+R+ + RR+ +D
Sbjct: 421 RMRAQMQKMMGAMQGQDTPDMEGLMDSIKAEEQAAAGTGKRRRKYGNLRRRDLD------ 474
Query: 563 SPRGF 567
+ RGF
Sbjct: 475 AMRGF 479
>gi|357153012|ref|XP_003576310.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 554
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/474 (75%), Positives = 416/474 (87%), Gaps = 1/474 (0%)
Query: 65 SKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEA 124
+ S+ RR L+VRAE FGQLT+GLE+AWNKL+G + LTK+++ EPMRDIRRALLEA
Sbjct: 52 ASSLGWRRRRGSALVVRAETFGQLTTGLESAWNKLRGVDVLTKDSVAEPMRDIRRALLEA 111
Query: 125 DVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPT 184
DVSLPVVRRFV +VSE+A+G G+IRG+RPDQQLVKIV DELV+LMGGEVS+LVFAK+ PT
Sbjct: 112 DVSLPVVRRFVSSVSEKALGSGVIRGIRPDQQLVKIVHDELVQLMGGEVSDLVFAKTGPT 171
Query: 185 VILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTA 244
VILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL +LGEQVGVPVY+
Sbjct: 172 VILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTVLGEQVGVPVYSE 231
Query: 245 GTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVD 304
GT KP+QI K +EEAK+K +D ++VDTAGRLQIDK MMDELK+VK+ +NPTE+LLVVD
Sbjct: 232 GTGAKPAQITKNAVEEAKRKKIDAIVVDTAGRLQIDKTMMDELKEVKKAVNPTEILLVVD 291
Query: 305 AMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDL 364
AMTGQEAAALVTTFNIEIGI+GAILTKLDGDSRGGAALSVKEVSGKPIK VGRGERMEDL
Sbjct: 292 AMTGQEAAALVTTFNIEIGISGAILTKLDGDSRGGAALSVKEVSGKPIKFVGRGERMEDL 351
Query: 365 EPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVAR 424
E FYPDRMA R+LGMGDVLSFVEKAQEV++QED E+QKKIMSA FDFNDFLKQT+ VA+
Sbjct: 352 ELFYPDRMAQRVLGMGDVLSFVEKAQEVVRQEDTIELQKKIMSAKFDFNDFLKQTQNVAK 411
Query: 425 MGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRV 484
MGSMSRVIGMIPGM K+TPAQ+REAEK L +E+MI AMT EEREKPELLAES RR RV
Sbjct: 412 MGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRERRIRV 471
Query: 485 AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALKSEQKA 537
A++S KTEQ+V QLVAQLFQMR +M+ LMG+M+G ++ + +L D+L +++KA
Sbjct: 472 AEESEKTEQEVGQLVAQLFQMRAQMQKLMGMMQGQEAITGMGDLMDSLNADEKA 525
>gi|326487934|dbj|BAJ89806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495310|dbj|BAJ85751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 554
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/467 (77%), Positives = 413/467 (88%), Gaps = 4/467 (0%)
Query: 75 RRR---LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVV 131
RRR L+VRAE FGQLT+GLE+AWNKL+G + LTKE IVEPMRDIRRALLEADVSLPVV
Sbjct: 59 RRRGSGLVVRAETFGQLTTGLESAWNKLRGVDVLTKETIVEPMRDIRRALLEADVSLPVV 118
Query: 132 RRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGL 191
RRFV +VSE+A+G +IRG+RP+QQLVKIV DELV+LMGGEVS+LVFAK+ PTVILLAGL
Sbjct: 119 RRFVSSVSEKALGSDVIRGIRPEQQLVKIVHDELVQLMGGEVSDLVFAKTGPTVILLAGL 178
Query: 192 QGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPS 251
QGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL +LGEQVGVPVY+ GT KP+
Sbjct: 179 QGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTVLGEQVGVPVYSEGTTAKPA 238
Query: 252 QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEA 311
+I K +EEAK+ N+D ++VDTAGRLQIDK MM ELK+VK+ +NPTE+LLVVDAMTGQEA
Sbjct: 239 EITKNAMEEAKRNNIDAIVVDTAGRLQIDKTMMVELKEVKKSVNPTEILLVVDAMTGQEA 298
Query: 312 AALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDR 371
AALVTTFNIEIGI+GAILTKLDGDSRGGAALSVKEVSGKPIK VGRGERMEDLE FYPDR
Sbjct: 299 AALVTTFNIEIGISGAILTKLDGDSRGGAALSVKEVSGKPIKFVGRGERMEDLELFYPDR 358
Query: 372 MAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRV 431
MA R+LGMGDVLSFVEKAQEV++QED E+QKKIMSA FDFNDFLKQT+ VA+MGSMSRV
Sbjct: 359 MAQRVLGMGDVLSFVEKAQEVVRQEDTTELQKKIMSAKFDFNDFLKQTQNVAKMGSMSRV 418
Query: 432 IGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKT 491
IGMIPGM K+TPAQ+REAEK L +E+MI AMT EE+EKPELLAES RR RVA++S KT
Sbjct: 419 IGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEKEKPELLAESRERRIRVAEESEKT 478
Query: 492 EQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALKSEQKA 537
EQ+VSQLVAQLFQMR +MK LMG+M+G ++ + +L D+L +++KA
Sbjct: 479 EQEVSQLVAQLFQMRAQMKKLMGMMQGQEAIAGMGDLMDSLNADEKA 525
>gi|357157550|ref|XP_003577835.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 548
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/487 (72%), Positives = 427/487 (87%), Gaps = 4/487 (0%)
Query: 71 RRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPV 130
RR+G ++VRAEMFGQLT+GLE+AWNKL+G + LTK+NI EPMRDIRRALLEADVS+PV
Sbjct: 58 RRSG---MVVRAEMFGQLTTGLESAWNKLRGVDRLTKDNIAEPMRDIRRALLEADVSVPV 114
Query: 131 VRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAG 190
R F+++V+E+A+G +I GV+P+QQLVK+V DELV+LMGG+VSELVFAKS PTVILLAG
Sbjct: 115 ARSFIESVTEKAIGTDVIPGVQPEQQLVKVVNDELVQLMGGDVSELVFAKSGPTVILLAG 174
Query: 191 LQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKP 250
LQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL ILG++VGVPVY+ GT+ KP
Sbjct: 175 LQGVGKTTVCAKLAFYLKKMGKSCMLVAADVYRPAAIDQLTILGKKVGVPVYSEGTDAKP 234
Query: 251 SQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQE 310
S IAK GL+EAK K DV+IVDTAGRLQ+DKAMM+ELK+VK+ + PTEVLLVVDAMTGQE
Sbjct: 235 SDIAKNGLKEAKSKKTDVIIVDTAGRLQVDKAMMNELKEVKKAVKPTEVLLVVDAMTGQE 294
Query: 311 AAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPD 370
AA+LV FN E+GITGAILTKLDGDSRGGAALS+KEVSGKPIK VGRGER+EDLEPFYPD
Sbjct: 295 AASLVGAFNGEVGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERVEDLEPFYPD 354
Query: 371 RMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSR 430
RMA RILGMGDVLSFVE+AQ+VM+QE+AEE+Q KIMSA F+FNDFLKQT+ +++MGS SR
Sbjct: 355 RMAQRILGMGDVLSFVEQAQQVMRQEEAEELQNKIMSAKFNFNDFLKQTKAISQMGSFSR 414
Query: 431 VIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGK 490
+IGMIPGM K+TPAQ+REAEK++K ME+MI M+ +ERE+PELLA S RR+RVA+DSGK
Sbjct: 415 IIGMIPGMNKVTPAQIREAEKNVKFMESMINVMSADERERPELLAGSRERRRRVAKDSGK 474
Query: 491 TEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSES 550
TEQQVSQLV+QLF+MR RM+ +MG M+G P + NL +++K+E++A GT +R+R+ +
Sbjct: 475 TEQQVSQLVSQLFKMRARMQKMMGAMQGKDTPDMDNLMESIKAEEQAATGTGQRRRKYGN 534
Query: 551 -RRQFVD 556
RR+ +D
Sbjct: 535 LRRRDLD 541
>gi|242070027|ref|XP_002450290.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
gi|241936133|gb|EES09278.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
Length = 539
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/483 (74%), Positives = 416/483 (86%), Gaps = 16/483 (3%)
Query: 75 RRR---LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVV 131
RRR L+VRAEMFGQLT+GLE+AWNKL+G + LTKENI EPMRDIRRALLEADVSLPVV
Sbjct: 61 RRRGSGLVVRAEMFGQLTTGLESAWNKLRGVDVLTKENIAEPMRDIRRALLEADVSLPVV 120
Query: 132 RRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGL 191
RRFV +VS++A+G IRGVRPDQQLVKIV DELV+LMGGEVS+LVF+KS PTVILLA
Sbjct: 121 RRFVSSVSDKALGANAIRGVRPDQQLVKIVHDELVQLMGGEVSDLVFSKSGPTVILLA-- 178
Query: 192 QGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPS 251
T +L QGKSCMLVA DVYRPAAIDQL ILG+QVGVPVY+ GTE KP+
Sbjct: 179 ----DTYTRVRL------QGKSCMLVAADVYRPAAIDQLTILGKQVGVPVYSEGTEAKPT 228
Query: 252 QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEA 311
QI K +EEAK KN+D ++VDTAGRLQIDK+MMDELK+VK+ +NPTEVLLVVDAMTGQEA
Sbjct: 229 QITKNAMEEAKSKNIDAIVVDTAGRLQIDKSMMDELKEVKKAVNPTEVLLVVDAMTGQEA 288
Query: 312 AALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDR 371
AALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK VGRGER+EDLE FYPDR
Sbjct: 289 AALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVGRGERLEDLELFYPDR 348
Query: 372 MAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRV 431
MA R+LGMGDVLSFVEK QEVM+QE+A E+QKKIMSA FDFNDFLKQ++ VA+MGSMSR+
Sbjct: 349 MAQRVLGMGDVLSFVEKTQEVMRQEEAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRI 408
Query: 432 IGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKT 491
IGM+PGM KITPAQ+REAEK L +E+MI AMT EEREKPELLAES RR RVA++SGKT
Sbjct: 409 IGMMPGMNKITPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRERRIRVAEESGKT 468
Query: 492 EQQVSQLVAQLFQMRVRMKNLMGVMEG-GSLPALSNLEDALKSEQKAPPGTARRKRRSES 550
EQ+VSQLVAQLFQMR +M+ LM +++G ++ + +L D+LK+E+KAPPGTARR+RR+
Sbjct: 469 EQEVSQLVAQLFQMRAQMQKLMSMVQGQDAIAGMGDLMDSLKAEEKAPPGTARRRRRNSK 528
Query: 551 RRQ 553
+Q
Sbjct: 529 PKQ 531
>gi|168001070|ref|XP_001753238.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695524|gb|EDQ81867.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 617
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/523 (67%), Positives = 425/523 (81%), Gaps = 5/523 (0%)
Query: 51 SRNLFTRETWGLINSKSVTI----RRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLT 106
SRN F + ++ I RR R L+VRA +F QLT LEAAW+KLK E+ LT
Sbjct: 89 SRNEFFARHEAFFLASNIGILHEARRENGRGLVVRAAVFDQLTDSLEAAWSKLKKEDVLT 148
Query: 107 KENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELV 166
K+NI EPM+DIRRALLEADVSLPVVRRFV++VSE+A+G+G++RGVRPDQQLVK+V DELV
Sbjct: 149 KDNIKEPMKDIRRALLEADVSLPVVRRFVKSVSEKAIGMGVVRGVRPDQQLVKVVNDELV 208
Query: 167 KLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 226
LMGGE+ + FAKS PTVIL+AGLQGVGKTT KLA + KK+GKS M+VA DVYRPAA
Sbjct: 209 GLMGGEMVGIEFAKSGPTVILMAGLQGVGKTTACGKLALFCKKKGKSVMMVATDVYRPAA 268
Query: 227 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 286
IDQLV LG+QV VPV+ AG +++P++IAK+GL E KK+ +DV+IVDTAGRLQ+D+ MMDE
Sbjct: 269 IDQLVTLGKQVEVPVFEAGNQLRPAEIAKRGLAEGKKQGIDVIIVDTAGRLQVDRGMMDE 328
Query: 287 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 346
LK +K+V+NPTEVLLVVDAMTGQEAA LV +FN+EIGITGAILTKLDGDSRGGAALSVKE
Sbjct: 329 LKQIKQVVNPTEVLLVVDAMTGQEAAGLVASFNLEIGITGAILTKLDGDSRGGAALSVKE 388
Query: 347 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 406
VS KPIK VG GE M LEPFYPDRMA RILGMGDVL+FVEKAQEVM +EDAE MQK+IM
Sbjct: 389 VSNKPIKFVGEGEGMTALEPFYPDRMASRILGMGDVLTFVEKAQEVMVKEDAELMQKRIM 448
Query: 407 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 466
A FDFNDFL QTR +ARMGSMS ++ +PGM K++P Q+REAEKSLKIME+MI +MTP+
Sbjct: 449 EAKFDFNDFLAQTRNLARMGSMSNIMKFLPGMNKVSPQQIREAEKSLKIMESMINSMTPK 508
Query: 467 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 526
ER P+LLA+SP RR+RVA SG++++QVS LVAQLFQMRVRMK+L +M+GGS+P +
Sbjct: 509 ERADPDLLAKSPSRRRRVANGSGRSQEQVSALVAQLFQMRVRMKSLATMMQGGSIPGMEG 568
Query: 527 LEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGG 569
LE+ +K +KA PGTA+RKR Q + + + SP+G GG
Sbjct: 569 LEEGMKGGRKAAPGTAKRKRSRGFASQLAE-SGAKSSPKGSGG 610
>gi|302761974|ref|XP_002964409.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
gi|300168138|gb|EFJ34742.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
Length = 494
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/492 (67%), Positives = 407/492 (82%), Gaps = 2/492 (0%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L +RA +F QL++ LE W KL+GEETLT EN+ EP++DIRRALLEADVSLPVVR+ V +
Sbjct: 1 LAIRAAVFDQLSTSLEKVWTKLQGEETLTSENMKEPLQDIRRALLEADVSLPVVRKLVGS 60
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
++E+AVG G+IRGVRPDQQLVK+V DEL+ LMGG+ + + F+ + PTVIL+AGLQGVGKT
Sbjct: 61 IAEKAVGTGVIRGVRPDQQLVKVVYDELISLMGGQAAHIEFSGTPPTVILMAGLQGVGKT 120
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
T KLA Y+KK+GKSCMLVA D+YRPAAI+QL+ LG+QV VPV+ AGTE+ P +IAK+G
Sbjct: 121 TACGKLALYMKKKGKSCMLVATDIYRPAAIEQLITLGKQVEVPVFEAGTELSPVEIAKRG 180
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
L+EAK+K DV+IVDTAGRLQ+D MMDELK +K+VLNP EVLLVVDAMTGQEAAALV+
Sbjct: 181 LKEAKEKGTDVLIVDTAGRLQVDATMMDELKQMKKVLNPNEVLLVVDAMTGQEAAALVSA 240
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FN+E+GITGAI+TK+DGDSRGGAALSV+EVSGKPIK VG GE M LE FYPDRMA RIL
Sbjct: 241 FNLEVGITGAIMTKVDGDSRGGAALSVREVSGKPIKFVGEGEGMNALELFYPDRMASRIL 300
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVLSFVEKAQE M +EDAE+MQKKIM A +DFND+LKQ +ARMGSM V+ +IPG
Sbjct: 301 GMGDVLSFVEKAQESMVKEDAEDMQKKIMEAKYDFNDYLKQLNALARMGSMGGVLKLIPG 360
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
M K+TP Q+REAE+SL I EAMI AMTPEERE PELLA+SPVRRKRVA +SG+TE QV Q
Sbjct: 361 MNKVTPQQIREAERSLSIAEAMINAMTPEEREDPELLAKSPVRRKRVATESGRTEAQVGQ 420
Query: 498 LVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKR-RSESRRQFVD 556
L++QL+QMR +MKNL M+ G +P L +LE+ L K PPGTARRK+ +SE ++Q
Sbjct: 421 LISQLYQMRAQMKNLAAKMQDGKMPGLEDLEE-LSKGAKLPPGTARRKKGKSELQKQLSA 479
Query: 557 PASTRPSPRGFG 568
+ + +P+GFG
Sbjct: 480 IGNKQSAPKGFG 491
>gi|62733121|gb|AAX95238.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
Length = 1072
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/489 (71%), Positives = 398/489 (81%), Gaps = 49/489 (10%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L+VRAEMFGQLT+GLE+AWNKL+G + LTKENIVEPMRDIRRALLEADVSLPVVRRFV +
Sbjct: 65 LVVRAEMFGQLTTGLESAWNKLRGVDVLTKENIVEPMRDIRRALLEADVSLPVVRRFVSS 124
Query: 138 VSEQAVGVGLIRGVRPDQQLVK-----------------IVRDELVKLMGGEVSELVFAK 180
+SE+A+G LIRGVRP+QQLVK IV DELVKLMGGEVS+LVFAK
Sbjct: 125 ISEKALGSDLIRGVRPEQQLVKTNLCAFSTGQITYSVVQIVHDELVKLMGGEVSDLVFAK 184
Query: 181 SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVP 240
S PTVILLAGLQ DVYRPAAIDQL ILGEQVGVP
Sbjct: 185 SGPTVILLAGLQ---------------------------DVYRPAAIDQLTILGEQVGVP 217
Query: 241 VYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVL 300
VY+ GTE KP+QI K +EEAK+KN+D +++DTAGRLQIDK+MM ELK+VK+ +NPTEVL
Sbjct: 218 VYSEGTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQIDKSMMVELKEVKKAVNPTEVL 277
Query: 301 LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 360
LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK VGRGER
Sbjct: 278 LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVGRGER 337
Query: 361 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 420
MEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+QKKIMSA FDFNDFLKQ++
Sbjct: 338 MEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFNDFLKQSQ 397
Query: 421 TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 480
VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI AMT EEREKPELLAES R
Sbjct: 398 NVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRDR 457
Query: 481 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALKSEQKAPP 539
R RVA++SGK+EQ+VSQLVAQLFQMR +M+ LMGVM G +LP + NL ++L +++K
Sbjct: 458 RIRVAEESGKSEQEVSQLVAQLFQMRAQMQKLMGVMTGQEALPGMGNLMESLNADEKG-- 515
Query: 540 GTARRKRRS 548
RRKR S
Sbjct: 516 --WRRKRGS 522
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 311/490 (63%), Positives = 364/490 (74%), Gaps = 75/490 (15%)
Query: 63 INSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALL 122
+N+ RR L+VRAEMFGQLT+GLE+AWNKL+G + LTK+NI EPMRDIRRALL
Sbjct: 509 LNADEKGWRRKRGSGLVVRAEMFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALL 568
Query: 123 EADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR 182
EADVSLPVVR F+++V+E+AVG +IRGV+P+QQLVK
Sbjct: 569 EADVSLPVVRSFIESVTEKAVGTDVIRGVKPEQQLVK----------------------- 605
Query: 183 PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 242
L+ QGKSCML+A DVYRPAAIDQL ILG+QVGVPVY
Sbjct: 606 ----------------------TSLRLQGKSCMLIAADVYRPAAIDQLTILGKQVGVPVY 643
Query: 243 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 302
+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK+VKR +NPTEVLLV
Sbjct: 644 SEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLV 703
Query: 303 VDAMTGQEAA--------------ALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 348
VDAMTGQEAA ALV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVS
Sbjct: 704 VDAMTGQEAAFALRLTRISFLIWPALVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVS 763
Query: 349 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA 408
GKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA
Sbjct: 764 GKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 823
Query: 409 NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEER 468
F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEER
Sbjct: 824 KFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEER 883
Query: 469 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 528
E+PELLAES RR RVA++SGK E+Q +MG M+G P + L
Sbjct: 884 ERPELLAESRERRIRVAKESGKNERQ----------------KMMGAMQGQDTPDMEGLM 927
Query: 529 DALKSEQKAP 538
D++K+E++AP
Sbjct: 928 DSIKAEEQAP 937
>gi|302768411|ref|XP_002967625.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
gi|300164363|gb|EFJ30972.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
Length = 462
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/458 (68%), Positives = 382/458 (83%), Gaps = 2/458 (0%)
Query: 112 EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGG 171
EP++DIRRALLEADVSLPVVR+ V +++E+AVG G+IRGVRPDQQLVK+V DEL+ LMGG
Sbjct: 3 EPLQDIRRALLEADVSLPVVRKLVGSIAEKAVGTGVIRGVRPDQQLVKVVYDELISLMGG 62
Query: 172 EVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 231
+ + + F+ + PTVIL+AGLQGVGKTT KLA Y+KK+GKSCMLVA D+YRPAAI+QL+
Sbjct: 63 QAAHIEFSGTPPTVILMAGLQGVGKTTACGKLALYMKKKGKSCMLVATDIYRPAAIEQLI 122
Query: 232 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 291
LG+QV VPV+ AGTE+ P +IAK+GL+EAK+K DV+IVDTAGRLQ+D MMDELK +K
Sbjct: 123 TLGKQVEVPVFEAGTELSPVEIAKRGLKEAKEKGTDVLIVDTAGRLQVDATMMDELKQMK 182
Query: 292 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 351
+VLNP EVLLVVDAMTGQEAAALV+ FN+E+GITGAI+TK+DGDSRGGAALSV+EVSGKP
Sbjct: 183 KVLNPNEVLLVVDAMTGQEAAALVSAFNLEVGITGAIMTKVDGDSRGGAALSVQEVSGKP 242
Query: 352 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 411
IK VG GE M LE FYPDRMA RILGMGDVLSFVEKAQE M +EDAE+MQKKIM A +D
Sbjct: 243 IKFVGEGEGMNALELFYPDRMASRILGMGDVLSFVEKAQESMMKEDAEDMQKKIMEAKYD 302
Query: 412 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 471
FND+LKQ +ARMGSM V+ +IPGM K+TP Q+REAE+SL I EAMI AMTPEERE P
Sbjct: 303 FNDYLKQLNALARMGSMGGVLKLIPGMNKVTPQQIREAERSLSIAEAMINAMTPEEREDP 362
Query: 472 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDAL 531
ELLA+SPVRRKRVA +SG+TE QV QL++QL+QMR +MKNL M+ G +P L +LE+ L
Sbjct: 363 ELLAKSPVRRKRVATESGRTEAQVGQLISQLYQMRAQMKNLAARMQDGKMPGLEDLEE-L 421
Query: 532 KSEQKAPPGTARRKR-RSESRRQFVDPASTRPSPRGFG 568
K PPGTARRK+ +SE ++Q + + +P+GFG
Sbjct: 422 SKGAKLPPGTARRKKGKSELQKQLSAIGNKQSAPKGFG 459
>gi|238009706|gb|ACR35888.1| unknown [Zea mays]
gi|413916133|gb|AFW56065.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 351
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/339 (75%), Positives = 298/339 (87%)
Query: 215 MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTA 274
MLVA DVYRPAAIDQL ILG++VGVPVY+ GTE KPSQIAK GL+EAK DV+IVDTA
Sbjct: 1 MLVAADVYRPAAIDQLTILGKKVGVPVYSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTA 60
Query: 275 GRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 334
GRLQ+DKAMM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDG
Sbjct: 61 GRLQVDKAMMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDG 120
Query: 335 DSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQ 394
DSRGGAALSVKEVSGKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+
Sbjct: 121 DSRGGAALSVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMR 180
Query: 395 QEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLK 454
QEDA+E+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK
Sbjct: 181 QEDADELQKKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLK 240
Query: 455 IMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 514
ME+MI MT EERE+PELLAES RRKRVA+DSGKTEQQVSQLVAQLFQMR +M+ +MG
Sbjct: 241 FMESMINVMTLEERERPELLAESRERRKRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMG 300
Query: 515 VMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 553
M+G P + L ++K+E+++ GT RR+R+ + RQ
Sbjct: 301 AMQGKESPDMDELMGSMKAEEQSAAGTGRRRRKYGNLRQ 339
>gi|124359738|gb|ABN06080.1| GTP-binding signal recognition particle SRP54, G-domain [Medicago
truncatula]
Length = 341
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/296 (86%), Positives = 275/296 (92%), Gaps = 1/296 (0%)
Query: 52 RNLFTRETWGLINSKSVTIRR-NGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENI 110
RN F +E WG + SKSVT+RR + R ++VRAEMFGQLT+GLE+AWNKLKGEE LTK+NI
Sbjct: 34 RNSFAKEIWGFVQSKSVTMRRMDMIRPVVVRAEMFGQLTTGLESAWNKLKGEEVLTKDNI 93
Query: 111 VEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMG 170
VEPMRDIRRALLEADVSLPVVRRFVQ+V++QAVGVG+ RGV+PDQQLVKIV DELV+LMG
Sbjct: 94 VEPMRDIRRALLEADVSLPVVRRFVQSVTDQAVGVGVTRGVKPDQQLVKIVHDELVQLMG 153
Query: 171 GEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 230
GEVSEL FAK+ PTVILLAGLQGVGKTTV AKLANY KKQGKSCMLVAGDVYRPAAIDQL
Sbjct: 154 GEVSELTFAKTGPTVILLAGLQGVGKTTVCAKLANYFKKQGKSCMLVAGDVYRPAAIDQL 213
Query: 231 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 290
ILG+QV VPVYTAGT+VKPS IAKQG EEAKKK +DVVIVDTAGRLQIDKAMMDELKDV
Sbjct: 214 TILGKQVDVPVYTAGTDVKPSDIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELKDV 273
Query: 291 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 346
KRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKE
Sbjct: 274 KRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKE 329
>gi|443656730|ref|ZP_21131781.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
gi|159027605|emb|CAO86977.1| ffh [Microcystis aeruginosa PCC 7806]
gi|443333355|gb|ELS47919.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
Length = 478
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/429 (58%), Positives = 326/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGQQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++NP + LLVVDAMTGQEAA+L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+A
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRTMMQQM 429
>gi|440756742|ref|ZP_20935942.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
gi|440172771|gb|ELP52255.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
Length = 478
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/429 (58%), Positives = 325/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++NP + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVNPDDTLLVVDAMTGQEAANLTHTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +VS+L+A
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRTMMQQM 429
>gi|425447198|ref|ZP_18827189.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
gi|389732320|emb|CCI03740.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
Length = 478
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/429 (58%), Positives = 326/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++NP + LLVVDAMTGQEAA+L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+A
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRTMMQQM 429
>gi|425437780|ref|ZP_18818194.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|425462607|ref|ZP_18842080.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
gi|389677199|emb|CCH93837.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|389824313|emb|CCI26812.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
Length = 478
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/429 (58%), Positives = 325/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++NP + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVNPDDTLLVVDAMTGQEAANLTHTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +VS+L+A
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRTMMQQM 429
>gi|158337260|ref|YP_001518435.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
gi|158307501|gb|ABW29118.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
Length = 476
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/423 (59%), Positives = 325/423 (76%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW L+G++ +++ NI + +R++RRALLEADV+L VV+ F++ V E A+
Sbjct: 1 MFEALSDRLESAWKTLRGQDKISESNIQDALREVRRALLEADVNLQVVKDFIEEVRESAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV+PDQQ +KIV D+LV++MG L + PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVITGVQPDQQFIKIVHDQLVEIMGATNEPLAESNKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ ++ +LVA D+YRPAAIDQLV LGEQ+ VPV+ GT+ P +IA+QGL A++
Sbjct: 121 ALHLRKQEQTSLLVATDIYRPAAIDQLVTLGEQIDVPVFQLGTDANPVEIARQGLAAARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+NVD VIVDTAGRLQID MM EL D+K+ + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 QNVDTVIVDTAGRLQIDPEMMSELADIKKAIKPDETLLVVDAMTGQEAANLTQTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALS++++SGKPIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDTRGGAALSIRQISGKPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQKKIM A FDF DFLKQ R + MGS+ V+ +IPGM KI+
Sbjct: 301 TLVEKAQEEFDIADAEKMQKKIMEAQFDFTDFLKQMRLLKNMGSLGGVMKLIPGMNKISN 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+Q++E E LK EAMI +MT EER+ P+LL+ SP RR+R+A+ SG T+ V +LV +
Sbjct: 361 SQLQEGETKLKQTEAMINSMTKEERKNPQLLSNSPSRRRRIAKGSGYTQNDVGKLVTEFQ 420
Query: 504 QMR 506
+MR
Sbjct: 421 RMR 423
>gi|425454517|ref|ZP_18834254.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
gi|389804798|emb|CCI15909.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
Length = 478
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/429 (58%), Positives = 326/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++NP + LLVVDAMTGQEAA+L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELGQIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+A
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|359457209|ref|ZP_09245772.1| signal recognition particle protein [Acaryochloris sp. CCMEE 5410]
Length = 476
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/423 (59%), Positives = 325/423 (76%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW L+G+ +++ NI + ++++RRALLEADV+L VV+ FV+ V E A+
Sbjct: 1 MFEALSDRLESAWKTLRGQTKISESNIQDALKEVRRALLEADVNLQVVKDFVEDVRESAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV+PDQQ +KIV D+LV++MG L + PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVITGVQPDQQFIKIVHDQLVEIMGATNEPLAESNKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ ++ +LVA D+YRPAAIDQLV LGEQ+ VPV+ GT+ P +IA+QGL A++
Sbjct: 121 ALHLRKQEQTSLLVATDIYRPAAIDQLVTLGEQIDVPVFQLGTDANPVEIARQGLAAARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+NVD VIVDTAGRLQID MM EL D+K+ + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 QNVDTVIVDTAGRLQIDPEMMSELADIKKAIKPDETLLVVDAMTGQEAANLTQTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALS++++SGKPIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDTRGGAALSIRQISGKPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQKKIM A FDF DFLKQ R + MGS+ V+ +IPGMGKI+
Sbjct: 301 TLVEKAQEEFDIADAEKMQKKIMEAQFDFTDFLKQMRLLKNMGSLGGVMKLIPGMGKISN 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+Q++E E L+ EAMI +MT EER+ P+LL+ SP RR+R+A+ SG T+ V +LV +
Sbjct: 361 SQLQEGETKLQQTEAMINSMTKEERKNPQLLSNSPSRRRRIAKGSGYTQNDVGKLVTEFQ 420
Query: 504 QMR 506
+MR
Sbjct: 421 RMR 423
>gi|422301683|ref|ZP_16389048.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
gi|425440580|ref|ZP_18820878.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389718934|emb|CCH97164.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389789195|emb|CCI14703.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
Length = 478
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/429 (58%), Positives = 325/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++ P + LLVVDAMTGQEAA+L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+A
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|425451260|ref|ZP_18831082.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
gi|389767641|emb|CCI07099.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
Length = 478
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/429 (58%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++ P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVKPDDTLLVVDAMTGQEAANLTHTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +VS+L+A
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|425470966|ref|ZP_18849826.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
gi|389883283|emb|CCI36344.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
Length = 478
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/429 (58%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++ P + LLVVDAMTGQEAA+L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|427709147|ref|YP_007051524.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
gi|427361652|gb|AFY44374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
Length = 491
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/429 (58%), Positives = 327/429 (76%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALADRLESAWKKLRGQDKISESNIQDALREVRRALLEADVNLQVVKDFISEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L A+ +PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVRPDQQFIKIVYDELVQVMGEENIPLAEAEQKPTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA D+YRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QGLE AK
Sbjct: 121 ALHLRKLDRSCLLVATDIYRPAAIDQLITLGKQIDVPVFDLGSDADPVEIARQGLERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V+ VI+DTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGVNTVIIDTAGRLQIDEDMMAELARIKATVQPHETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGIGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEEIDLADAEQMQEKILSAKFDFTDFLKQLRLLKNMGSLGGILKMIPGMGKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER+ P+LLA SP RR+RVA SG E +S+LV+
Sbjct: 361 DQLKQGETQLKRCEAMINSMTKQERQDPDLLASSPSRRRRVASGSGYKEADISKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|425464792|ref|ZP_18844102.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
gi|389833087|emb|CCI22684.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
Length = 478
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/429 (58%), Positives = 323/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++ P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVKPDDTLLVVDAMTGQEAANLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLITNFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|332705584|ref|ZP_08425660.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
gi|332355376|gb|EGJ34840.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
Length = 479
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/440 (57%), Positives = 329/440 (74%), Gaps = 4/440 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI + ++++RRALL ADV+L VV+ FV V +A
Sbjct: 1 MFDALAERLEDAWKKLRGQDKISSSNIQDALKEVRRALLSADVNLQVVKDFVAEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + GVRPDQQ +KIV DELV++MG L A + PTV+L+AGLQG GKTT SAKL
Sbjct: 61 GSEVTSGVRPDQQFIKIVYDELVQVMGETNVPLAQADTPPTVVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ +SC+LVA DVYRPAAIDQLV LG+Q+ VPV+ GTE P +IA+QG+E AK
Sbjct: 121 ALHLRKQERSCLLVATDVYRPAAIDQLVTLGQQIDVPVFELGTEADPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D VI+DTAGRLQID+ MM EL +K + P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 MAIDTVIIDTAGRLQIDQEMMGELSRIKETVQPHDTLLVVDAMTGQEAATLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAIL+KLDGDSRGGAALSV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILSKLDGDSRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+K++ A FDF+DFLKQ R + MGS+ ++ ++PGMGK++
Sbjct: 301 TLVEKAQEEIDIADAEQMQQKMLEAKFDFSDFLKQMRLLKNMGSLGGLMKLVPGMGKLSS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+Q+++ E LK EAMI +MT EER P+LLA SP RR+R+AQ SG TE+ V LV++
Sbjct: 361 SQLQQGETKLKQSEAMISSMTSEERRNPDLLASSPSRRRRIAQGSGHTEKDVRGLVSEF- 419
Query: 504 QMRVRMKNLMGVMEGGSLPA 523
RM++LM M G +PA
Sbjct: 420 ---TRMRSLMQQMGQGQMPA 436
>gi|390437797|ref|ZP_10226315.1| Signal recognition particle protein [Microcystis sp. T1-4]
gi|389838790|emb|CCI30439.1| Signal recognition particle protein [Microcystis sp. T1-4]
Length = 478
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/429 (57%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI E ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM +L +K+++ P + LLVVDAMTGQEAA+L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGQLAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|166368109|ref|YP_001660382.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
gi|166090482|dbj|BAG05190.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
Length = 478
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/429 (57%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++ NI + ++++RRALLEADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISSANIQDTLKEVRRALLEADVNLQVVKGFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ KSC++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P IA+QG+E+AK+
Sbjct: 121 ALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K+++ P + LLVVDAMTGQEAA+L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDTQMMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + EDA +MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++
Sbjct: 301 TLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E +V++L+
Sbjct: 361 TDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLITNFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|254414856|ref|ZP_05028620.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178345|gb|EDX73345.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 486
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/429 (57%), Positives = 325/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +++ NI + ++++RRALL ADV+L VV++FV V A+
Sbjct: 1 MFDALAERLEDAWKKLRGQDKISQANIQDALKEVRRALLSADVNLQVVKKFVADVETTAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG L A + PT++L+AGLQG GKTT +AKL
Sbjct: 61 GADVIAGVRPDQQFIKIVYDELVQVMGESNVPLAKADTSPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L K+ +SC++VA DVYRPAAIDQLV LGEQ+ +PV+ GT+ P +IA QG+ AK+
Sbjct: 121 ALHLGKENRSCLMVATDVYRPAAIDQLVTLGEQINIPVFEMGTDTNPVEIACQGVAHAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K + P EVLLVVDAMTGQEAA L TFN +IG
Sbjct: 181 TGVDTVIIDTAGRLQIDAEMMAELAQIKDNVKPDEVLLVVDAMTGQEAATLTHTFNQQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV++VSG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DA +MQ+K+++A FDF+DFLKQ R + MGS+ ++ ++PGMGK++
Sbjct: 301 TLVEKAQEEIDMADAAQMQEKMLNAQFDFSDFLKQMRLLKNMGSLGGLMKLMPGMGKLSS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + E LK EAMI +MT EER P+LLA SP RR+R+A+ SG +E++VS L+++
Sbjct: 361 DQLEKGEGKLKQTEAMINSMTAEERRNPDLLAGSPSRRRRIARGSGHSEREVSSLISEFT 420
Query: 504 QMRVRMKNL 512
+MR MK +
Sbjct: 421 KMRSLMKQM 429
>gi|428773330|ref|YP_007165118.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
gi|428687609|gb|AFZ47469.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
Length = 483
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/429 (57%), Positives = 322/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE W KL+G+ +++ NI + ++++RRALLEADV+ VV+ FV V + A+
Sbjct: 1 MFDALAERLEDTWKKLRGQGKISQSNIQDALQEVRRALLEADVNFQVVKSFVAEVEKNAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A+ PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPQQQFIKIVYDELVKVMGESNVPLAKAEKAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +SC++VA DVYRPAAIDQL+ LGEQ+ +PV+ G++ P +IA+QG+ A++
Sbjct: 121 ALYLQKQKRSCLMVATDVYRPAAIDQLITLGEQIKIPVFELGSDANPVEIARQGVVSAQE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +D VI+DTAGRLQID+ MM EL +K +NP EVLLVVDAMTGQEAA L TF+ EIG
Sbjct: 181 QGIDTVIIDTAGRLQIDQEMMGELSQIKSTVNPDEVLLVVDAMTGQEAANLTRTFHEEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+ +SGKPIK +G GE++E LEPFYPDRMA RIL MGD++
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRTISGKPIKFIGVGEKVEALEPFYPDRMASRILNMGDIV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + D E+MQ+K+M A FDFNDFLKQ R + MGS + V+ +IPGM KI
Sbjct: 301 SLVEKAQEELDIGDVEKMQRKMMEAKFDFNDFLKQMRLLKNMGSFAGVMKLIPGMNKIGA 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + E LKI E++I +MT +ERE PELLA+SP RR+R+AQ SG E++VS+L++
Sbjct: 361 GALEKGESQLKITESIINSMTKQERENPELLAKSPSRRRRIAQGSGHQEKEVSRLISDFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSMMQQM 429
>gi|384245021|gb|EIE18517.1| signal recognition particle protein [Coccomyxa subellipsoidea
C-169]
Length = 489
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/447 (57%), Positives = 341/447 (76%), Gaps = 1/447 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE W+ ++ + LT +NI PMR+IRRALLEADVSLPVVR+FV++V E A+
Sbjct: 1 MFDNLSQRLEGVWDTVRKDGKLTADNIKTPMREIRRALLEADVSLPVVRQFVKSVEETAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++GVRPDQQLVK+V D+LV+LMGG+ +L K P VIL+AGLQGVGKTT KL
Sbjct: 61 GTKVLKGVRPDQQLVKVVNDQLVELMGGQQQDLNDPKDGPQVILMAGLQGVGKTTACGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L+K+ K ++VA DVYRPAAIDQLV LGE++ VPV+ GT+ KP++IA++GL +A+
Sbjct: 121 ALALQKRNKRVLMVATDVYRPAAIDQLVSLGERINVPVFEMGTDAKPAEIARRGLAKARA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D +IVDTAGRLQID MM EL++V+ + P++ LLVVDAMTGQEAA LV FN
Sbjct: 181 EDFDAIIVDTAGRLQIDANMMSELREVQATVQPSDTLLVVDAMTGQEAAGLVKAFNEAAE 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSVK VSGKPIK VG GE++E LEPFYPDR+A RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVKAVSGKPIKFVGTGEKLEALEPFYPDRIASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKA+ +++EDA E+ K+++SA FDFNDFLKQ + V+ MGSM +++ M+PGM +IT
Sbjct: 301 TLVEKAEASIKEEDAAEITKRMLSAKFDFNDFLKQYKMVSGMGSMGQIMKMLPGMNQITE 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ EAEK K+ EA+I +MTPEER P+LLA++ RR+R+A+ +G+ E V+ ++
Sbjct: 361 KQLNEAEKQFKMFEALINSMTPEERTNPDLLAKTASRRRRIARGAGRIEVDVTNMIGTFG 420
Query: 504 QMRVRMKNLMGVME-GGSLPALSNLED 529
MR +M++L +M+ GG P + L D
Sbjct: 421 GMRAKMQSLSKMMKMGGGAPGMPQLSD 447
>gi|119510257|ref|ZP_01629394.1| signal recognition particle protein [Nodularia spumigena CCY9414]
gi|119465106|gb|EAW46006.1| signal recognition particle protein [Nodularia spumigena CCY9414]
Length = 490
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/440 (57%), Positives = 331/440 (75%), Gaps = 4/440 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFISEVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV++MG E L + +PT++L+AGLQG GKTT +AKL
Sbjct: 61 GADVVAGVRPDQQFIKIVHDELVRVMGAENVPLAETEEKPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQLV LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKLERSCLLVATDVYRPAAIDQLVTLGKQIDVPVFELGSDADPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ + VI+DTAGRLQID+ MM EL +K + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 EGFNTVIIDTAGRLQIDEDMMGELARIKATVQPHETLLVVDSMTGQEAANLTRTFHDKIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE DAE+MQ KI+SA FDFNDF+KQ R + MGS+ ++ +IPGM KI+
Sbjct: 301 SLVEKAQEEFDLADAEKMQDKILSAKFDFNDFVKQLRMLKNMGSLGGIMKLIPGMNKISD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK E+MI +MT +ER+ P+LLA SP RR+R+A+ SG E VS+LVA F
Sbjct: 361 EQLKQGETQLKRCESMINSMTRQERQDPDLLASSPSRRRRIAKGSGYREPDVSKLVAD-F 419
Query: 504 QMRVRMKNLMGVMEGGSLPA 523
Q +M+ LM M G +PA
Sbjct: 420 Q---KMRTLMQQMGQGQMPA 436
>gi|428301996|ref|YP_007140302.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
gi|428238540|gb|AFZ04330.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
Length = 487
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/429 (57%), Positives = 325/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFINEVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I G++P+QQ +KIV DELVK+MG E L A + PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGIKPEQQFIKIVHDELVKVMGEENVPLAQASTSPTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K ++C++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+ + K
Sbjct: 121 ALHLRKLNRTCLMVATDVYRPAAIDQLITLGKQIEVPVFQLGSDADPVEIARQGIAQGKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID+ MM EL +K + P E+LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 DGVDTVIIDTAGRLQIDQDMMAELAQIKATVQPHEILLVVDSMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ +I MIPGM K+T
Sbjct: 301 TLVEKAQEEIDLADAEKMQEKILSAKFDFTDFLKQLRLLKNMGSLGGIIKMIPGMNKLTD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LLA SP RR+RVA SG E VS+LV+
Sbjct: 361 DQLKQGETQLKRCEAMINSMTQQERRDPDLLASSPSRRRRVAGGSGYKENDVSKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRGMMQQM 429
>gi|434392620|ref|YP_007127567.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
gi|428264461|gb|AFZ30407.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
Length = 484
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/429 (58%), Positives = 322/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW KL+G++ +T+ NI E +R++RRALLEADV+L VV+ F+ V A
Sbjct: 1 MFDALADRLESAWKKLRGQDKITQSNIQEALREVRRALLEADVNLQVVKDFIAEVESHAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV +ELV++MG L A+ PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGVRPDQQFIKIVYEELVQVMGETNVPLAQAEQPPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SCM+VA DVYRPAAIDQLV LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKLERSCMMVATDVYRPAAIDQLVTLGKQIEVPVFEMGSDANPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VD VI+DTAGRLQID+ MM EL +K + P EVLLVVDAMTGQEAA L TF+ EIG
Sbjct: 181 EGVDTVIIDTAGRLQIDQDMMAELAQIKETVQPHEVLLVVDAMTGQEAANLTRTFHDEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DA +MQ+KIM+A FDF DFLKQ R + MGS+ ++ +IPGM K++
Sbjct: 301 TLVEKAQEEIDLADAAKMQEKIMAAKFDFTDFLKQMRLLKNMGSLGGIMKLIPGMNKLSE 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LLA SP RRKR+A SG E V++LV
Sbjct: 361 DQLKQGETQLKRAEAMINSMTAQERRDPDLLASSPSRRKRIANGSGYKEADVNKLVGDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|254421926|ref|ZP_05035644.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
gi|196189415|gb|EDX84379.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
Length = 491
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/439 (58%), Positives = 334/439 (76%), Gaps = 5/439 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ E+AW KL+G++ ++ NI E +R++RRALLEAD +L VV+ FV V E+A
Sbjct: 1 MFEALSEQFESAWKKLRGQDKISDANITEALREVRRALLEADANLDVVKGFVADVKEKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV+ MG L ++++PTV+L+AGLQG GKTT SAKL
Sbjct: 61 GADVVSGVRPDQQFIKIVYDELVETMGDTNVPLADSENKPTVVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ +S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G + P +IA+QGL++AK
Sbjct: 121 ALHLRKQERSALLVATDVYRPAAIDQLLTLGKQIDVPVFEIGADANPVEIARQGLKKAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D VI+DTAGRLQID MM EL VK V P EVLLVVDAMTGQEAA L TF+ EIG
Sbjct: 181 DGIDTVIIDTAGRLQIDTDMMAELAQVKEVAQPDEVLLVVDAMTGQEAATLTRTFHDEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+ +SG+PIK +G GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRRISGQPIKFIGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KIT 442
+ VEKAQE + DAE++Q+KI+SA FDFNDFLKQTR + MGS++ ++ MIPGMG K++
Sbjct: 301 TLVEKAQEEVDIADAEKLQEKILSAKFDFNDFLKQTRLMKNMGSLAGIMKMIPGMGNKLS 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q+++ E+ LK EAMI +MT EER+ PE+L+ SP RR+RVA+ +G E+ V +LV+
Sbjct: 361 SDQLQQGEQQLKRCEAMINSMTMEERQNPEVLSGSPSRRRRVAKGAGYAEKDVGKLVSD- 419
Query: 503 FQMRVRMKNLMGVMEGGSL 521
FQ RM+ LM M G++
Sbjct: 420 FQ---RMRGLMQQMGQGNM 435
>gi|427730772|ref|YP_007077009.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
gi|427366691|gb|AFY49412.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
Length = 489
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/429 (57%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW L+G++ +T NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALADRLESAWKTLRGQDKITDSNIQDALREVRRALLEADVNLQVVKDFISEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+GVRPDQQ +KIV DELV++MG E L + +PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVIKGVRPDQQFIKIVYDELVQVMGEENVPLTETEQKPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKLERSCLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDADPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V+ VI+DTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGVNTVIIDTAGRLQIDEDMMAELARIKATVQPDETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEEIDLADAEQMQEKILSAKFDFTDFLKQLRLLKNMGSLGGILKMIPGMGKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK E+MI +MT +ER P+LLA SP RR+R+A SG E V++LVA
Sbjct: 361 DQLKQGETQLKRCESMINSMTAQERRDPDLLASSPNRRRRIANGSGYKEADVNKLVADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|282898237|ref|ZP_06306228.1| Signal recognition particle protein [Raphidiopsis brookii D9]
gi|281196768|gb|EFA71673.1| Signal recognition particle protein [Raphidiopsis brookii D9]
Length = 480
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/439 (58%), Positives = 332/439 (75%), Gaps = 4/439 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEAAW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLEAAWKKLRGQDKISQTNIQDALREVRRALLEADVNLQVVKDFIVDVENKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L A+ + TVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVRPDQQFIKIVYDELVQVMGEENVPLAQAQDKTTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQLV LG+QV VPV+ G++ P +IA+QG+E A+
Sbjct: 121 ALHLRKTNRSCLLVATDVYRPAAIDQLVTLGKQVDVPVFEMGSDADPVEIARQGVERARN 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++ VIVDTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGINTVIVDTAGRLQIDQDMMAELSRIKSTIEPDETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK +G GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGAPIKFIGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ ++ +IPGM KI+
Sbjct: 301 TLVEKAQEEIDLADAEKMQEKILSAKFDFTDFLKQLRLMKNMGSLGGMMKLIPGMNKISD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK E+MI +MT +ER+ P+LLA SP RRKR+A SG E VS+LV+ F
Sbjct: 361 EQLKKGETQLKRCESMINSMTKKERKDPDLLASSPSRRKRIASGSGYKESDVSKLVSD-F 419
Query: 504 QMRVRMKNLMGVMEGGSLP 522
Q +M++LM M G+ P
Sbjct: 420 Q---KMRSLMQQMGQGNFP 435
>gi|428781665|ref|YP_007173451.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
gi|428695944|gb|AFZ52094.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
Length = 484
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/427 (58%), Positives = 323/427 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +T NI +++IRR+LL ADV+L VV+ F+ V + A
Sbjct: 1 MFDALSESLESAWKKLRGQDKITSSNIKPALQEIRRSLLSADVNLQVVKTFIADVEKAAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELVK+MG L A++ PT+IL+AGLQG GKTT +AKL
Sbjct: 61 GADVISGVRPDQQFIKIVNDELVKVMGESNVPLAQAETPPTIILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ +S ++V DVYRPAAIDQL LGEQ+ VPV+ GTE P ++AKQG+E+AK
Sbjct: 121 ALHLRKQNRSALMVGTDVYRPAAIDQLKTLGEQIDVPVFEMGTEANPVEVAKQGVEKAKT 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D VI+DTAGRLQID+ MM EL VK+ ++P EVLLVVDAMTGQEAA+L TF+ ++G
Sbjct: 181 DGIDTVIIDTAGRLQIDQNMMGELIAVKKAISPHEVLLVVDAMTGQEAASLTDTFHQQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTKLDGD+RGGAALSV++VSG+PIK +G GE++E L+PFYP+RMA RILGMGDV+
Sbjct: 241 VTGAILTKLDGDTRGGAALSVRQVSGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + DAE MQ K++ A FDFNDFLKQ R + MGS ++ MIPGM K++
Sbjct: 301 SLVEKAQEEIDMADAEAMQAKMLEARFDFNDFLKQMRLLKNMGSFGSIMKMIPGMNKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + + E LK EAMI +MT +ERE+PELLA+SP RR+RV + SG E+ VS+LV
Sbjct: 361 SDIEKGETQLKRTEAMINSMTKQEREEPELLAKSPGRRRRVGKGSGHQEKDVSKLVEDFR 420
Query: 504 QMRVRMK 510
+MR M+
Sbjct: 421 KMRSMMQ 427
>gi|427418338|ref|ZP_18908521.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
gi|425761051|gb|EKV01904.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
Length = 493
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/428 (58%), Positives = 325/428 (75%), Gaps = 1/428 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ E+AW L+G++ ++ NI E +R++RRALLEADVS VV+ FV V E+A
Sbjct: 1 MFEALSERFESAWKTLRGQDKISDSNIKEALREVRRALLEADVSFNVVKDFVVDVQEKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GV PDQQ +KIV DELV LMG L +S+PTV+L+AGLQG GKTT SAKL
Sbjct: 61 GAEVVSGVAPDQQFIKIVYDELVALMGDANEPLADVESKPTVVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ +S MLVA DVYRPAA+DQL+ LG+Q+ VPV+ GT+ P IAK G+ +A++
Sbjct: 121 ALHLRKQERSAMLVATDVYRPAAVDQLITLGKQIKVPVFEMGTDANPVDIAKAGIAKAQE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VIVDTAGRLQID+ MM EL+ +K ++P EVLLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 DGVDTVIVDTAGRLQIDQDMMAELEQIKTAISPDEVLLVVDAMTGQEAATLTQTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALS++++SGKPIK +G GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSIRQISGKPIKFIGIGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ VEKAQE + DAE++Q KI+ A FDFNDFLKQTR + MGS++ ++ +IPGM K++
Sbjct: 301 TLVEKAQEEVDIADAEKLQAKILEARFDFNDFLKQTRLMKNMGSLTGIMKLIPGMSNKLS 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q+++ E L+ EAMI +MT +ERE P+LLA SP RR+R+A+ SG ++ VS+LV+
Sbjct: 361 ADQLQQGETQLRRCEAMINSMTKQEREDPDLLANSPGRRRRIAKGSGYNDKDVSKLVSDF 420
Query: 503 FQMRVRMK 510
+MR MK
Sbjct: 421 QKMRSMMK 428
>gi|427716938|ref|YP_007064932.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
gi|427349374|gb|AFY32098.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
Length = 485
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/429 (57%), Positives = 322/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFISTVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELVK+MG E L A T++L+AGLQG GKTT +AKL
Sbjct: 61 GADVLAGVRPDQQFIKIVHDELVKVMGEENVPLAEAAGETTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKLERSCLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++ VI+DTAGRLQID+ MM EL +K + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 EGINTVIIDTAGRLQIDEDMMAELARIKETVQPHETLLVVDSMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+SA FDF DFLKQ R + MGS+ +I MIPGM K++
Sbjct: 301 TLVEKAQEEFDLADAEKMQEKILSAKFDFTDFLKQLRMLKNMGSLGGLIKMIPGMNKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LLA SP RR+R+A SG E VS+LVA
Sbjct: 361 DQLKQGETQLKRCEAMINSMTRQERHDPDLLASSPSRRRRIASGSGYRESDVSKLVADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|282899599|ref|ZP_06307563.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195478|gb|EFA70411.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
Length = 480
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/439 (57%), Positives = 333/439 (75%), Gaps = 4/439 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEAAW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLEAAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFIADVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L A+++ TV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVRPDQQFIKIVYDELVQVMGEENVPLAEAQNQTTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA D+YRPAAIDQLV LG+Q+ VPV+ G++ P +IA+QG+E A+
Sbjct: 121 ALHLRKTNRSCLLVATDIYRPAAIDQLVTLGKQIDVPVFEMGSDADPVEIARQGVERARN 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++ VIVDTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGINTVIVDTAGRLQIDQDMMAELSRIKSTIEPDETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK +G GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGAPIKFIGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ V+ +IPGM KI+
Sbjct: 301 TLVEKAQEEIDLADAEKMQEKILSARFDFTDFLKQLRLMKNMGSLGGVMKLIPGMNKISD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK E+MI +MT +ER+ P+LLA SP RR+R+A SG E V++LV+ F
Sbjct: 361 EQLKQGETQLKRCESMISSMTKQERKDPDLLASSPSRRRRIASGSGYKESDVTKLVSD-F 419
Query: 504 QMRVRMKNLMGVMEGGSLP 522
Q +M++LM M G+ P
Sbjct: 420 Q---KMRSLMQQMGQGNFP 435
>gi|113476149|ref|YP_722210.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
gi|110167197|gb|ABG51737.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
Length = 483
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/462 (55%), Positives = 337/462 (72%), Gaps = 9/462 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +T NI + + ++RRALLEADV+L VV+ F+ VS +A
Sbjct: 1 MFEALADRLEVAWKKLRGQDKITDSNIQQALGEVRRALLEADVNLQVVKGFIAEVSSKAK 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DEL ++MG + L A PT++L+AGLQG GKTT SAKL
Sbjct: 61 GADVLTGVRPDQQFIKIVHDELAQIMGESNAPLAKADQPPTIVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ +S +LVA DVYRPAAIDQLV LG+Q+ VPV+ GT++ P +IA++GLE+AK
Sbjct: 121 ALHLRKENRSALLVATDVYRPAAIDQLVTLGKQIDVPVFELGTDIDPVEIAQKGLEKAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D+VI+DTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TFN +IG
Sbjct: 181 DGIDIVIIDTAGRLQIDQDMMAELARIKAAVKPQETLLVVDAMTGQEAATLTRTFNDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+ +SG+PIK +G GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDTRGGAALSVRRISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+SA FDF DFLKQTR + MGS+ ++ +IPGM KI+
Sbjct: 301 TLVEKAQEEFDIADAEKMQEKILSAKFDFTDFLKQTRLMKNMGSLGGIMKLIPGMNKISD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++++ E LK E+MI +MT +ER+ PELLA+SP RR+R+A SG E+ VS+LV+ F
Sbjct: 361 DKLQQGETQLKRCESMINSMTRQERQNPELLAKSPSRRRRIAGGSGYAEKDVSKLVSD-F 419
Query: 504 QMRVRMKNLMGVMEGGSLP-----ALSNLEDALKSEQKAPPG 540
Q RM++LM M G L + + KAPPG
Sbjct: 420 Q---RMRSLMQKMGQGDLSGMGMPGMPGMGMPGMLGGKAPPG 458
>gi|284928857|ref|YP_003421379.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
gi|284809316|gb|ADB95021.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
Length = 494
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/429 (56%), Positives = 319/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE AW KL+G+ +T NI E ++++RRALLEADV+L VV+ F+ + + A+
Sbjct: 1 MFDALTDRLEEAWKKLRGQNIITHANIQETLKEVRRALLEADVNLQVVKDFIADIEKSAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
GV +I+GV P QQ +K+V +ELVK+MG S L A+S PTVIL+ GLQG GKTT +AKL
Sbjct: 61 GVKVIQGVNPGQQFIKVVYEELVKVMGESNSPLAKAESDPTVILMVGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A+YLKKQ +SC++VA D+YRPAAIDQL LG+Q+ VPV+ G + P IA QG+ +AK+
Sbjct: 121 AHYLKKQKQSCLMVAADIYRPAAIDQLKTLGQQIEVPVFELGNQENPVNIALQGVNKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRLQID+ MM EL +K +NP + LLVVDAMTGQEAA L TF+ +I
Sbjct: 181 IEADVVIIDTAGRLQIDQGMMLELTQIKESINPHDTLLVVDAMTGQEAANLAQTFHEKIK 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV++VSG+PIK VG GE++E L+PFYPDRMA RIL MGD+L
Sbjct: 241 ITGTILTKMDGDTRGGAALSVRKVSGQPIKFVGVGEKIEALQPFYPDRMASRILNMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E++Q KI+ A FDFNDFLKQTR + MGS S ++ M+PG+ KI
Sbjct: 301 TLVEKAQEEIDFSDMEQLQSKILDAKFDFNDFLKQTRLMKSMGSFSNILKMVPGLNKINT 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + E LK EAMI +MT EER+ P+LLA+SP RR R+A+ SG +E ++S+L+
Sbjct: 361 KDIEKGENELKRTEAMIGSMTLEERKDPDLLAKSPSRRYRIAKGSGYSETEISKLIKNFT 420
Query: 504 QMRVRMKNL 512
+MR M+ L
Sbjct: 421 RMRTMMQQL 429
>gi|443312631|ref|ZP_21042247.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
gi|442777350|gb|ELR87627.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
Length = 482
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/474 (53%), Positives = 338/474 (71%), Gaps = 9/474 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +T NI E ++++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLESAWKKLRGQDKITSANIQEALKEVRRALLEADVNLQVVKDFIAGVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DEL+++MG L A PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVSGVRPDQQFIKIVYDELLEVMGETNVPLAKADQAPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKK +SC+LVA D+YRPAAIDQLV LG+Q+ VPV+ G++ P +IAK+G+E+AK+
Sbjct: 121 ALHLKKINRSCLLVATDIYRPAAIDQLVTLGKQIQVPVFEMGSDADPVEIAKRGVEQAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VD VI+DTAGRLQID MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 QGVDTVIIDTAGRLQIDVDMMGELARIKAAVQPQETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV++VSG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+K++SA FDF DFLKQ R + MGS+ ++ MIPGM K+
Sbjct: 301 TLVEKAQEEIDLADAEQMQQKMLSAKFDFTDFLKQMRLLKNMGSLGGLMKMIPGMNKLNS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI++MT +ER+ P++LA SP RR+R+A SG E V++LV+
Sbjct: 361 DQLKQGETQLKRCEAMIKSMTTKERKDPDILASSPSRRRRIAGGSGYKESDVAKLVSDFQ 420
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDP 557
+MR M+ M G P + + +++ P + R + DP
Sbjct: 421 KMRTMMQQ----MTQGGFPGMPGMFGGMEN-----PAAVGNRPAQAGWRGYSDP 465
>gi|186683137|ref|YP_001866333.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
gi|186465589|gb|ACC81390.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
Length = 488
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/429 (57%), Positives = 323/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEAAW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLEAAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFISEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV++MG E + A+ +PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVTGVRPDQQFIKIVHDELVEVMGEENVPIAEAQEKPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E A+
Sbjct: 121 ALHLRKLDRSCLLVATDVYRPAAIDQLLTLGKQIDVPVFELGSDADPVEIARQGVERARA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V+ VI+DTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGVNTVIIDTAGRLQIDEDMMAELARIKATVQPHETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRKISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+SA FDF DFLKQ R + MGS+ I MIPGM K++
Sbjct: 301 TLVEKAQEEFDLADAEKMQEKILSAKFDFTDFLKQLRMLKNMGSLGGFIKMIPGMNKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LLA SP RR+R+A SG E V++LV
Sbjct: 361 DQLKQGETQLKRCEAMINSMTRQERHDPDLLASSPSRRRRIAAGSGYRESDVTKLVGDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|334117488|ref|ZP_08491579.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
gi|333460597|gb|EGK89205.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
Length = 482
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/429 (56%), Positives = 322/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+ W KL+G+ +++ NI + ++++RRALLEADV+L VV+ F+ V+ +A
Sbjct: 1 MFEALADRLESTWKKLRGQNKISESNIQDALKEVRRALLEADVNLQVVKNFIGEVAAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV++MG L A S PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVVSGVRPDQQFIKIVHDELVRVMGETNVPLATADSGPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ ++ +LVA D+YRPAAIDQL+ LG+Q+ VPV+ G ++ P +IA+QG+E K+
Sbjct: 121 ALHLRKQNRTALLVATDIYRPAAIDQLLTLGKQIDVPVFELGKDIDPVEIARQGIEHGKQ 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D +IVDTAGRLQID+ MM EL +K+ + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 IGIDTIIVDTAGRLQIDQDMMAELGRIKQTVQPHETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+K+++A FDF DFLKQTR + MGS+ ++ MIPGM K++
Sbjct: 301 TLVEKAQEEFDIADAEKMQEKMLTAKFDFTDFLKQTRLLKNMGSLGGIMKMIPGMNKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+R+ E LK EAMI +MT EER PELLA SP RR+R+ + +G E V++LV+
Sbjct: 361 EQMRQGEVQLKRTEAMINSMTVEERRNPELLASSPSRRRRIGKGAGYAENDVTKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRTMMQQM 429
>gi|428317311|ref|YP_007115193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
gi|428240991|gb|AFZ06777.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
Length = 482
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/429 (56%), Positives = 323/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+ W KL+G+ +++ NI + ++++RRALLEADV+L VV+ F+ V+ +A
Sbjct: 1 MFEALADRLESTWKKLRGQNKISESNIQDALKEVRRALLEADVNLQVVKNFIGEVAAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV++MG L A+S PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVSGVRPDQQFIKIVHDELVRVMGETNVPLATAESGPTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ ++ +LVA D+YRPAAIDQL+ LG+Q+ VPV+ G ++ P +IA+QG+E K+
Sbjct: 121 ALHLRKQNRTALLVATDIYRPAAIDQLLTLGKQIDVPVFELGKDIDPVEIARQGIEHGKQ 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D +IVDTAGRLQID+ MM EL +K+ + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 IGIDTIIVDTAGRLQIDQDMMAELGRIKQTVQPHETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+K+++A FDF DFLKQTR + MGS+ ++ MIPGM K++
Sbjct: 301 TLVEKAQEEFDIADAEKMQQKMLTAKFDFTDFLKQTRLLKNMGSLGGIMKMIPGMNKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+R+ E LK EAMI +MT EER PELLA SP RR+R+ + +G E V++LV+
Sbjct: 361 EQMRQGEVQLKRTEAMINSMTVEERRNPELLASSPSRRRRIGKGAGYAENDVTKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRTMMQQM 429
>gi|443478735|ref|ZP_21068451.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
gi|443015940|gb|ELS30714.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
Length = 477
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/439 (57%), Positives = 333/439 (75%), Gaps = 5/439 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF ++ EAAW KL+G++ +++ NI +R++RRALLEADV+L VV+ FV+ +S+QA
Sbjct: 1 MFDEIADKFEAAWKKLRGQDKISESNIQGAIREVRRALLEADVNLQVVKEFVEEISKQAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV+ MG L A + PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GADVIAGVRPDQQFIKIVYDELVRTMGEANVPLAEANNAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K ++ +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G + P +IA+QGL +AK+
Sbjct: 121 ALHLRKLDRTALLVATDVYRPAAIDQLITLGKQINVPVFEMGADADPVEIARQGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
V+ VI+DTAGRLQID+ MMDELK VK + P EVLLVVDAMTGQEAA L TF+ EIG
Sbjct: 181 LGVNTVIIDTAGRLQIDRDMMDELKRVKDTIKPDEVLLVVDAMTGQEAATLTRTFHDEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+++SG+PIK +G GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DA +Q+KI+ A FDF+DFLK TR + MGS ++ M+PGM KI
Sbjct: 301 TLVEKAQEEIDFTDAANLQEKILKAQFDFDDFLKNTRMMKNMGSFGGMLKMLPGM-KIND 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
AQ++EAEK LK E+MI +MT +ER+ P+L+A+SP R++R+A +G Q V++LVA F
Sbjct: 360 AQIQEAEKQLKRCESMISSMTKQERKDPDLIAKSPSRKQRIANGAGYKLQDVTKLVAD-F 418
Query: 504 QMRVRMKNLMGVMEGGSLP 522
Q +M++LM M G +P
Sbjct: 419 Q---KMRSLMQQMGQGKMP 434
>gi|443321269|ref|ZP_21050328.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
gi|442789014|gb|ELR98688.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
Length = 481
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/441 (56%), Positives = 323/441 (73%), Gaps = 4/441 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE +W KL+G+ +++ NI + ++D++RAL+ ADV+L VV+ FV V +A+
Sbjct: 1 MFDALAERLEESWKKLRGQNKISQANIQDALKDVKRALIAADVNLEVVKTFVNEVESKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV+PDQQ VKIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVKPDQQFVKIVHDELVKVMGESNVPLAQATQSPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +SC++VA D+YRPAAI QL+ LG+Q+ +PV+ GT+V P +IA+QG+ +AK+
Sbjct: 121 ALYLQKQKRSCLMVATDIYRPAAIAQLLTLGKQIDIPVFELGTQVNPVEIARQGVAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +KR P + LLVVDAMTGQEAA L TFN EIG
Sbjct: 181 MGVDTVIIDTAGRLQIDPEMMAELSQIKRATQPHDTLLVVDAMTGQEAANLTRTFNDEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGD+L
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+M KI A FDFNDFLKQ R + MGS+ ++ +IPGM K++
Sbjct: 301 TLVEKAQEELDIADLEKMHAKITEAKFDFNDFLKQMRLLKNMGSLGGILKLIPGMNKLSN 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + + E LK EAMI +MT EER P+LL++SP RR+R+A+ SG E+ +S+LV
Sbjct: 361 SDLAKGESQLKQTEAMINSMTKEERSNPDLLSKSPGRRRRIAKGSGFQEKDISKLVTDF- 419
Query: 504 QMRVRMKNLMGVMEGGSLPAL 524
RM+++M M G +PAL
Sbjct: 420 ---TRMRSMMQQMSSGGMPAL 437
>gi|427713289|ref|YP_007061913.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
gi|427377418|gb|AFY61370.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
Length = 480
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/423 (57%), Positives = 323/423 (76%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW L+G++ +++ NI + +R++RRALLEADV+L VV+ F++ V ++A+
Sbjct: 1 MFDALADRLESAWKSLRGQDKISETNIQDALREVRRALLEADVNLQVVKTFIEEVRQRAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV +MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVVAGVRPDQQFIKIVYDELVTVMGESNVPLAQASQAPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ ++ +LVA D+YRPAAIDQL+ LG+Q+ VPV+ GTEV P +IA+QG+ + ++
Sbjct: 121 ALHLRKENRTTLLVATDIYRPAAIDQLLTLGKQINVPVFELGTEVNPVEIARQGIAKGRE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VIVDTAGRLQID MM EL D+K+ + P EVLLVVDAMTGQEAA L F+ +IG
Sbjct: 181 LGVDTVIVDTAGRLQIDADMMAELGDIKKTVTPDEVLLVVDAMTGQEAANLTQAFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+++SG+PIK +G GE++E L+PFYPDR+A RILGMGDVL
Sbjct: 241 ITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE M +KI+ A FDFNDFLKQTR + MGS+ ++ +IPGMGKI+
Sbjct: 301 TLVEKAQEEVDLADAENMTRKILEAQFDFNDFLKQTRLLKNMGSLGGIMKLIPGMGKISN 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + E LK E+MI +MT +ERE P+LLA SP R+KRVAQ SG + V++LV+
Sbjct: 361 EQLEQGESQLKRAESMINSMTRQERENPQLLANSPSRKKRVAQGSGHKLEDVAKLVSDFQ 420
Query: 504 QMR 506
+MR
Sbjct: 421 RMR 423
>gi|17229444|ref|NP_485992.1| signal recognition particle protein [Nostoc sp. PCC 7120]
gi|17131042|dbj|BAB73651.1| signal recognition particle protein [Nostoc sp. PCC 7120]
Length = 490
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/429 (57%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALADRLESAWKKLRGQDKISESNIQDALREVRRALLEADVNLQVVKDFISEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L + +PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVRPDQQFIKIVYDELVQVMGEENVPLAEVEQKPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKLERSCLLVATDVYRPAAIDQLLTLGKQIDVPVFELGSDADPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V+ VI+DTAGRLQID+ MM EL +K + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 EGVNTVIIDTAGRLQIDEDMMAELARIKETVQPHETLLVVDSMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+SA FDF DF+KQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEEFDLADAEKMQEKILSAKFDFTDFVKQLRMLKNMGSLGGLLKMIPGMGKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LLA SP RR+R+A SG E V++LVA
Sbjct: 361 DQLKQGETQLKRCEAMINSMTMQERRDPDLLASSPNRRRRIASGSGYKEADVNKLVADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|119488999|ref|ZP_01621934.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
gi|119454955|gb|EAW36098.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
Length = 480
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/429 (57%), Positives = 321/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L++AW KL+G++ +T+ NI + ++D+RRALLEADV+L VV+ FV V EQA
Sbjct: 1 MFDALAERLDSAWKKLRGQDKITESNIQDALKDVRRALLEADVNLQVVKEFVAEVGEQAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + GVRP +Q VKIV DELVK+MG L A S PT++L+AGLQG GKTT +AKL
Sbjct: 61 GSQVFSGVRPGEQFVKIVHDELVKVMGESNVPLATADSPPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ ++ ++VA DVYRPAAIDQL LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKENRTALMVATDVYRPAAIDQLKTLGQQIEVPVFELGSDADPVEIARQGVEYAKT 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VD VI+DTAGRLQID+ MM EL +K V+ P + LLVVDAMTGQEAA L TFN +IG
Sbjct: 181 QGVDTVIIDTAGRLQIDQDMMAELARIKAVVQPHDTLLVVDAMTGQEAATLTQTFNEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+GAILTKLDGDSRGGAALS++ +SG PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ISGAILTKLDGDSRGGAALSIRRISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KIM A FDF DFLKQTR + MGS+ + +IPGM KI+
Sbjct: 301 TLVEKAQEEFDLADAEKMQQKIMEAKFDFTDFLKQTRLMKNMGSLGGLAKLIPGMNKISK 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + E+ LK EAMI +MT EER+ PE+LA SP RR+R+A+ SG +E+ V +LV
Sbjct: 361 EQLEQGEQQLKRSEAMINSMTTEERKNPEVLASSPSRRRRIAKGSGHSEKDVMRLVGDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGMMQQM 429
>gi|428776938|ref|YP_007168725.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
gi|428691217|gb|AFZ44511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
Length = 483
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/423 (58%), Positives = 319/423 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +T NI ++++RRALL ADV+L VV+ F+ V + A
Sbjct: 1 MFDALSESLESAWKKLRGQDKITSNNIKPALQEVRRALLSADVNLQVVKGFIADVEKAAE 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ VKIV DELVK+MG L A++ PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVLSGVRPDQQFVKIVNDELVKVMGESNVPLAEAETAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ +S ++V DVYRPAAIDQL LGEQ+ VPV+ GTE P +AKQG+E+AK
Sbjct: 121 ALHLRKQNRSALMVGTDVYRPAAIDQLKTLGEQIDVPVFEMGTEANPVDVAKQGIEKAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +D V+VDTAGRLQID+ MM EL +K ++P EVLLVVDAMTGQEAA+L TF+ ++G
Sbjct: 181 EGIDTVLVDTAGRLQIDQDMMQELIAIKNEISPHEVLLVVDAMTGQEAASLTDTFHQQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTKLDGD+RGGAALSV++VSG+PIK +G GE++E L+PFYP+RMA RILGMGDV+
Sbjct: 241 VTGAILTKLDGDTRGGAALSVRQVSGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + DAE MQ K++ A FDFNDFLKQ R + MGS V+ MIPGM K++
Sbjct: 301 SLVEKAQEEIDMADAEAMQAKMLEARFDFNDFLKQMRLLKNMGSFGSVMKMIPGMNKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + + E LK EAMI +MT +ERE+PELLA+SP RR+RV + SG E+ V +LV
Sbjct: 361 SDIEKGETQLKRTEAMINSMTKQEREEPELLAKSPSRRRRVGKGSGHQEKDVVKLVNDFT 420
Query: 504 QMR 506
+MR
Sbjct: 421 KMR 423
>gi|75910555|ref|YP_324851.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
gi|75704280|gb|ABA23956.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
Length = 490
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/429 (57%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALADRLESAWKKLRGQDKISESNIQDALREVRRALLEADVNLQVVKDFISEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L + +PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVRPDQQFIKIVYDELVQVMGEENVPLAEVEQKPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKLERSCLLVATDVYRPAAIDQLLTLGKQIDVPVFELGSDADPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V+ VI+DTAGRLQID+ MM EL +K + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 EGVNTVIIDTAGRLQIDEDMMAELARIKETVQPHETLLVVDSMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+SA FDF DF+KQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEEFDLADAEKMQEKILSAKFDFTDFVKQLRMLKNMGSLGGLLKMIPGMGKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LLA SP RR+R+A SG E V++LVA
Sbjct: 361 DQLKQGETQLKRCEAMINSMTIQERRDPDLLASSPNRRRRIASGSGYKEADVNKLVADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|434398063|ref|YP_007132067.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
gi|428269160|gb|AFZ35101.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
Length = 485
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/429 (57%), Positives = 320/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ ++K NI + ++++RRALLEADV+L VV+ F+ V ++A
Sbjct: 1 MFDALAERLEDAWKKLRGQDKISKSNIQDALKEVRRALLEADVNLQVVKNFIAEVEKEAN 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PT+IL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKVMGESNVPLAQADKAPTIILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ ++C++VA DVYRPAAI+QL+ LG+Q+ VPV+ GT+ P +IA+QG+E+AK+
Sbjct: 121 ALYLQKQQQTCLMVATDVYRPAAINQLLTLGKQINVPVFEMGTDANPVEIARQGIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD V++DTAGRLQID+ MM EL +K + P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVLIDTAGRLQIDQDMMAELAQIKETVQPHDTLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV++VSG+PIK VG GE++E LEPFYPDR+A RIL MGD+L
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQVSGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E MQ KI+ A FDFNDFLKQ R + MGS+ V+ +IPGM KI+
Sbjct: 301 TLVEKAQEEIDLADMENMQSKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGMNKISG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
A +++ E LK EAMI +MT EE+ PELLA+SP RR+RVA+ SG E VS+L+
Sbjct: 361 ADLQKGETQLKRTEAMINSMTKEEKSNPELLAQSPSRRRRVAKGSGFEETDVSKLIKDFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSLMQQM 429
>gi|428212117|ref|YP_007085261.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
gi|428000498|gb|AFY81341.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
Length = 476
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/416 (59%), Positives = 316/416 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +++ NI E +RD+RRALLEADV+L VV+ F+ V E+A+
Sbjct: 1 MFDALAERLEGAWKKLRGQDKISESNIQEALRDVRRALLEADVNLQVVKAFIADVEEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV++MG L A++ PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVSGVRPDQQFIKIVYDELVEVMGESNVPLAQAETAPTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ ++ +LVA D+YRPAAIDQL+ LG+Q+ VPV+ GT+ P +IA+QG++ A
Sbjct: 121 ALHLRKQNRTTLLVATDIYRPAAIDQLLTLGKQIDVPVFELGTDADPVEIARQGIQHAVA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VIVDTAGRLQID MM EL +K + P E LLVVDAMTGQEAA L TFN EIG
Sbjct: 181 IGVDTVIVDTAGRLQIDADMMAELAQIKETIQPHETLLVVDAMTGQEAANLTRTFNDEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQLSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VE+A E + DAE+MQ+KI+ A FDFNDFLKQ R + MGS+ ++ MIPG+GKI+
Sbjct: 301 TLVERAAEQVDLADAEKMQQKILQAQFDFNDFLKQMRLMKNMGSLGGLLKMIPGVGKISD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
Q+ + E LK EAMI +MT +ER P+LLA SP RRKRVA+ SG + V++LV
Sbjct: 361 DQLSKGESQLKSAEAMINSMTAQERVNPDLLAGSPSRRKRVARGSGHDDAAVTKLV 416
>gi|428223265|ref|YP_007107435.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
gi|427996605|gb|AFY75300.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
Length = 470
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/427 (57%), Positives = 327/427 (76%), Gaps = 1/427 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +++ E AW KL+G++ +T NI +R++RRALLEAD +L VV+ F ++++A
Sbjct: 1 MFDEISDKFEQAWKKLRGQDKITTSNIQGAIREVRRALLEADANLQVVKDFSDRLTQKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E + L A++ PTVIL+AGLQG GKTT SAKL
Sbjct: 61 GADVIAGVRPDQQFIKIVYDELVQVMGSENAPLAEAETAPTVILMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K ++ +LVA D+YRPAAIDQL+ LG Q+ VPV+ GT+ P +IA+QG+ AK
Sbjct: 121 ALHLRKLNRTTLLVATDIYRPAAIDQLITLGNQIDVPVFQLGTDANPVEIARQGVAHAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++ VIVDTAGRLQID+ MM EL +K+ + P EVLLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGINTVIVDTAGRLQIDETMMAELVQIKQAIAPHEVLLVVDAMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+E+SG+PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVREISGQPIKFVGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE++Q+KI+SA FDF+DFLK TR + MGS ++ M+PGM KI
Sbjct: 301 TLVEKAQEEINIADAEKLQEKILSAKFDFDDFLKNTRMMKSMGSFGGLLKMLPGM-KIND 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
AQ++EAE LK EAMI +MT +ER+ P+LLA+SP R++R+A+ SG Q V++LV+
Sbjct: 360 AQIKEAENQLKRCEAMISSMTKQERQDPDLLAKSPSRKQRIAKGSGYQLQDVTKLVSDFQ 419
Query: 504 QMRVRMK 510
+MR M+
Sbjct: 420 RMRTMMQ 426
>gi|411120536|ref|ZP_11392908.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
gi|410709205|gb|EKQ66720.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
Length = 487
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/438 (56%), Positives = 331/438 (75%), Gaps = 4/438 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW L+G++ +++ NI E +R++RRALLEADV+L VV+ FV V +A
Sbjct: 1 MFEALSERLESAWKTLRGQDKISESNIKEAVREVRRALLEADVNLQVVKDFVAGVERKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+GVRPDQQ V+IV ELV++MG S L + PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVIKGVRPDQQFVEIVYTELVQVMGETNSPLAEVEPAPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ +S MLVA DVYRPAAIDQL+ LG+Q+ VPV+ G + P +IA+QG+E+AK
Sbjct: 121 ALHLRKENRSTMLVATDVYRPAAIDQLITLGKQIDVPVFELGKDANPVEIARQGVEKAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ VI+DTAGRLQID+ MM EL +K + P EVLLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 DGINTVIIDTAGRLQIDQDMMAELAQIKEAVQPHEVLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+++SG+PIK +G GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDTRGGAALSVRQISGQPIKFIGTGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKA+E + +AE+MQ+KI+SA FDF DFLKQTR + MGS+ ++ +IPGM KI+
Sbjct: 301 TLVEKAREEVDLVEAEKMQEKILSAKFDFTDFLKQTRLLKTMGSLGGIMKLIPGMNKISS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + E LK E+MI +MTPEER+ P+LLA SP RR+R+A+ SG E VS LV + F
Sbjct: 361 DQLEKGESELKKAESMINSMTPEERKNPDLLASSPSRRRRIARGSGYREADVSDLVNK-F 419
Query: 504 QMRVRMKNLMGVMEGGSL 521
Q +M+N+M +M G
Sbjct: 420 Q---KMRNMMQMMGKGQF 434
>gi|257058483|ref|YP_003136371.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
gi|256588649|gb|ACU99535.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
Length = 492
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/423 (56%), Positives = 317/423 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +T+ NI + + ++RRALL ADV+L VV+ F+ V + A+
Sbjct: 1 MFDALAERLEDAWKKLRGQDKITENNIQDALTEVRRALLAADVNLQVVKNFIADVEKAAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L + PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKVMGESNVPLATTATAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +SC++VA D+YRPAAIDQL+ LG+Q+ VPV+ G+E P IA+QG+E+AK+
Sbjct: 121 ALYLRKQKRSCLMVATDIYRPAAIDQLITLGQQIEVPVFELGSEANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD V++DTAGRLQID++MM EL +K + P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVLIDTAGRLQIDESMMVELARIKEAVKPDDTLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+++SG+PIK +G GE++E L+PFYPDRMA RIL MGD+L
Sbjct: 241 ITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRMASRILNMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + D E+MQ KI+ A FDFNDFLKQ R + MGS+ ++ MIPG+ K++
Sbjct: 301 SLVEKAQEEIDIADVEKMQSKILEAKFDFNDFLKQMRLMKNMGSLGGLLKMIPGLNKLSS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER+ P+LLA+SP RR+R+A+ SG E +VS+LV
Sbjct: 361 TDIEKGEKELKRTEAMINSMTVEERKNPDLLAKSPSRRRRIAKGSGHAESEVSKLVTNFT 420
Query: 504 QMR 506
+MR
Sbjct: 421 RMR 423
>gi|307151061|ref|YP_003886445.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
gi|306981289|gb|ADN13170.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
Length = 487
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/429 (55%), Positives = 321/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +++ NI + ++++RRAL+ ADV+L VV+ F+ V +QA+
Sbjct: 1 MFDALAERLEDAWKKLRGQDKISQSNIQDALKEVRRALISADVNLQVVKNFIAEVEKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV D+LVK+MG L A + PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDQLVKVMGESNVPLAQASTPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ +SC++VA DVYRPAAIDQL+ LG+Q+ VPV+ GTE P +IA+QG+++AK+
Sbjct: 121 ALFLRKENRSCLMVATDVYRPAAIDQLITLGQQIDVPVFELGTEADPVEIARQGVQKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID+ MM EL +K + P + LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDEDMMAELARIKATVKPHDTLLVVDSMTGQEAATLTHTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV++VSG+PIK VG GE++E L+PFYPDRMA RIL MGD++
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILNMGDII 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+MQ KI+ A FDFNDFLKQ + + MGS+ ++ +IPGMGK++
Sbjct: 301 TLVEKAQEELDLSDVEKMQSKILQAQFDFNDFLKQMKLLKNMGSLGGILKLIPGMGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
A + + E LK E+MI +MT EER P+LLA SP RR+R+A+ SG +E VS L+
Sbjct: 361 ADIAKGETELKRTESMINSMTAEERTNPDLLASSPSRRRRIAKGSGHSESDVSALIKNFS 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRGMMQQM 429
>gi|218245446|ref|YP_002370817.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
gi|218165924|gb|ACK64661.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
Length = 492
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/423 (56%), Positives = 317/423 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +T+ NI + + ++RRALL ADV+L VV+ F+ V + A+
Sbjct: 1 MFDALAERLEDAWKKLRGQDKITENNIQDALTEVRRALLAADVNLQVVKNFIADVEKAAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L + PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKVMGESNVPLATTATAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +SC++VA D+YRPAAIDQL+ LG+Q+ VPV+ G+E P IA+QG+E+AK+
Sbjct: 121 ALYLRKQKRSCLMVATDIYRPAAIDQLITLGQQIEVPVFELGSEANPVDIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD V++DTAGRLQID++MM EL +K + P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVLIDTAGRLQIDESMMVELARIKEAVKPDDTLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+++SG+PIK +G GE++E L+PFYPDRMA RIL MGD+L
Sbjct: 241 ITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRMASRILNMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + D E+MQ KI+ A FDFNDFLKQ R + MGS+ ++ MIPG+ K++
Sbjct: 301 SLVEKAQEEIDIADVEKMQSKILEAKFDFNDFLKQMRLMKNMGSLGGLLKMIPGLNKLSS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER+ P+LLA+SP RR+R+A+ SG E +VS+LV
Sbjct: 361 TDIEKGEKELKRTEAMINSMTVEERKNPDLLAKSPSRRRRIAKGSGHAESEVSKLVTNFT 420
Query: 504 QMR 506
+MR
Sbjct: 421 RMR 423
>gi|428219543|ref|YP_007104008.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
gi|427991325|gb|AFY71580.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
Length = 472
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/437 (56%), Positives = 334/437 (76%), Gaps = 5/437 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+ ++AW KL+G + ++ N+ + +RD+RRALLEADV+L VV+ V + E+A+
Sbjct: 1 MFDELSEKFDSAWKKLRGHDKISDTNVQDAIRDVRRALLEADVNLQVVKEVVDRIGEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +++V +ELV+LMG + L +++ PT+IL+AGLQG GKTT SAKL
Sbjct: 61 GTDVIAGVRPDQQFIQVVYNELVELMGTDNQPLAQSENSPTIILMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L+KQ +S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ GT+ P +IAKQG+ +A+
Sbjct: 121 ALQLRKQERSALLVATDVYRPAAIDQLITLGKQINVPVFQLGTDANPVEIAKQGVAQAQA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +D VIVDTAGRLQID+ MM EL +K ++P EVLLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGIDTVIVDTAGRLQIDQDMMAELSQIKGAIDPDEVLLVVDAMTGQEAANLTQTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+E+SG+PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVREISGQPIKFVGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE++Q+KI+ A FDF+DFLKQTR + MGS ++ +IPGM KI+
Sbjct: 301 TLVEKAQEEIDIADAEKLQEKILEARFDFDDFLKQTRMMKNMGSFGGIMKLIPGM-KISD 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ +AE LK +E+MI +MT +ER+ P+LLA SP R++RVA+ +G Q V++LV+ F
Sbjct: 360 DQLNQAETQLKRVESMISSMTKQERKDPDLLARSPGRKQRVAKGAGYKTQDVTKLVSD-F 418
Query: 504 QMRVRMKNLMGVMEGGS 520
Q RM+ LM M G+
Sbjct: 419 Q---RMRGLMQQMGQGN 432
>gi|428226672|ref|YP_007110769.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
gi|427986573|gb|AFY67717.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
Length = 482
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/429 (55%), Positives = 323/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW KL+G++ +T+ N+ +R++RRALLEADV+L VV+ FV V E+A+
Sbjct: 1 MFEALADRLESAWTKLRGQDKITESNVEAAIREVRRALLEADVNLQVVKDFVAEVQEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+G+RPDQ VK+V D+LV++MG + L + P V+L+AGLQG GKTT +AKL
Sbjct: 61 GADVIKGLRPDQVFVKVVHDQLVEVMGSANAPLASPDTPPAVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+K+ + ++VA DVYRPAA+DQL+ LG+Q+ VPV+ GT+ P +IA++G+E ++
Sbjct: 121 ALYLRKENRKALMVATDVYRPAAVDQLITLGKQIDVPVFEMGTQANPVEIARRGVERGRE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VDVV++DTAGRLQID++MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDVVLIDTAGRLQIDQSMMAELAQIKETVQPHETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+ +SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDARGGAALSVRRISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+ A FDFNDFLKQ R + MGS+ VI +IPG+ KI+
Sbjct: 301 TLVEKAQEEFDLADAEKMQEKILEAKFDFNDFLKQMRFLKNMGSLGSVIKLIPGLNKISS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + E LK E+MI +MT ER P+LL+ SP RR+RVA+ SG +E+ VS+LV+
Sbjct: 361 EQLEQGESQLKRAESMISSMTKAERRNPDLLSSSPSRRQRVAKGSGHSERDVSKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRAMMQQM 429
>gi|298490416|ref|YP_003720593.1| signal recognition particle protein ['Nostoc azollae' 0708]
gi|298232334|gb|ADI63470.1| signal recognition particle protein ['Nostoc azollae' 0708]
Length = 485
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/429 (56%), Positives = 324/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFISEVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L + + T++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVITGVRPDQQFIKIVYDELVQVMGEENIPLAEVEGKTTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAI+QL+ LG+Q+ VPV+ G++ P +IA+QG+E A+
Sbjct: 121 ALHLRKLNRSCLLVATDVYRPAAIEQLLTLGKQIDVPVFELGSDADPVEIARQGVEHARA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++ VIVDTAGRLQID+ MM EL +K + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 EGINTVIVDTAGRLQIDQDMMAELSRIKSTIEPDETLLVVDSMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ ++ +IPGMGK++
Sbjct: 301 TLVEKAQEEIDLADAEQMQEKILSAKFDFTDFLKQLRLMKNMGSLGGIMKLIPGMGKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LLA SP RR+R+A +G E VS+LV
Sbjct: 361 DQLKQGETQLKRCEAMINSMTKQERRNPDLLASSPSRRRRIASGAGYRESDVSKLVGDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|423062554|ref|ZP_17051344.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
gi|406715889|gb|EKD11041.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
Length = 471
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/429 (57%), Positives = 319/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +T+ NI E ++++RRALLEADV+L VV+ F++ V QA
Sbjct: 1 MFDALSERLESAWKKLRGQDKITESNIQEALKEVRRALLEADVNLMVVKDFIKEVGVQAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GV+P QQ +KIV DELVK+MG L A+ PT++L+AGLQG GKTT SAKL
Sbjct: 61 GSQVVSGVKPGQQFIKIVHDELVKVMGESNVPLAEAQQPPTIVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ +S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G + P +IA+QG+E K
Sbjct: 121 ALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDADPVEIARQGIEYGKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +D +I+DTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TFN IG
Sbjct: 181 QGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALS++ VSG PIK VG GE++E L+PFYP+RMA RILGMGD+L
Sbjct: 241 ITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+ A FDF DFLKQTR + MGS+ ++ +IPGM KI+
Sbjct: 301 TLVEKAQEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQ 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ E LK EAMI +MT EER+ PELL+ SP RRKRVA+ +G E+ V +LV+
Sbjct: 361 EQLDAGESQLKRSEAMINSMTIEERKNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSLMQQM 429
>gi|354565512|ref|ZP_08984687.1| signal recognition particle protein [Fischerella sp. JSC-11]
gi|353549471|gb|EHC18913.1| signal recognition particle protein [Fischerella sp. JSC-11]
Length = 486
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/429 (57%), Positives = 321/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LEAAW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALADRLEAAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKEFISEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG LV A++ PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGVRPDQQFIKIVYDELVQVMGETNVPLVQAQNPPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K ++C++VA DVYRPAAI+QLV LG+Q+ VPV+ G++ P +IA+ G+E +
Sbjct: 121 ALHLRKIDRTCLMVATDVYRPAAIEQLVTLGKQIDVPVFEMGSDADPVEIARLGVERGRA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID MM EL +K V+ P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EKFDTVIIDTAGRLQIDADMMAELARIKEVVQPHETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+ +SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRRISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI++A FDF DFLKQ R + MGS+ ++ +IPGM K++
Sbjct: 301 TLVEKAQEEFDLADAEKMQEKILAAKFDFTDFLKQLRLLKNMGSLGGILKLIPGMNKLSS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT EER+ P+LLA SP RR+R+A SG E VS+LV+
Sbjct: 361 DQLQQGETQLKRCEAMINSMTQEERKNPDLLASSPSRRRRIAGGSGYKEADVSKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|16330898|ref|NP_441626.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|383322640|ref|YP_005383493.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325809|ref|YP_005386662.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491693|ref|YP_005409369.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436960|ref|YP_005651684.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|451815056|ref|YP_007451508.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|2500885|sp|P74214.1|SRP54_SYNY3 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1653392|dbj|BAA18306.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|339273992|dbj|BAK50479.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|359271959|dbj|BAL29478.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275129|dbj|BAL32647.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278299|dbj|BAL35816.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961740|dbj|BAM54980.1| signal recognition particle protein [Bacillus subtilis BEST7613]
gi|451781025|gb|AGF51994.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
Length = 482
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/423 (56%), Positives = 320/423 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +++ NI E ++++RRALL ADV+L VV+ F++ V ++A+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKISESNIKEALQEVRRALLAADVNLQVVKGFIKDVEQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELV LMG L A+ PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GADVISGVNPGQQFIKIVYDELVNLMGESNVPLAQAEQAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +S ++VA DVYRPAAIDQL LG+Q+ VPV+ G++ P +IA+QG+E+AK+
Sbjct: 121 ALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD V++DTAGRLQID MM EL ++K+V+ P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVLIDTAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E L+PFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E++Q KI+ A FDF+DF+KQ R + MGS+ ++ MIPGM K++
Sbjct: 301 TLVEKAQEAIDVGDVEKLQNKILEATFDFDDFIKQMRFMKNMGSLGGLLKMIPGMNKLSS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + EK LK EAMI +MT EER+ P+LLA+SP RR+R+AQ SG +E VS+L+
Sbjct: 361 GDIEKGEKELKRTEAMISSMTTEERKNPDLLAKSPSRRRRIAQGSGHSETDVSKLITNFT 420
Query: 504 QMR 506
+MR
Sbjct: 421 KMR 423
>gi|443324440|ref|ZP_21053193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
gi|442795959|gb|ELS05293.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
Length = 489
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/427 (57%), Positives = 315/427 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ AW KL+G++ ++ NI + ++++RRALL ADV+L VV+ F+ + E+AV
Sbjct: 1 MFDALADKLDDAWKKLRGQDKISSSNIQDALKEVRRALLSADVNLQVVKNFIARIEEKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GV P QQ +KIV DELV +MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVLSGVNPGQQFIKIVYDELVAVMGESNVPLAEADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +SC++V DVYRPAAIDQL+ LG+Q+ VPV+ GT+ P +IA+QGL +A++
Sbjct: 121 ALYLRKQQRSCLMVGTDVYRPAAIDQLLTLGKQIDVPVFEMGTDADPVEIARQGLAKARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VD VIVDTAGRLQID MM EL +K + P +VLLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 MSVDTVIVDTAGRLQIDSDMMGELAQIKETIQPDDVLLVVDSMTGQEAANLTHTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV++VSG+PIK VG GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQVSGQPIKFVGTGEKVEALEPFYPDRIASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DA +MQ KIM A FDFNDFLKQ R + MGS+ V+ +IPGM K++
Sbjct: 301 TLVEKAQEEFDLADAAQMQAKIMEARFDFNDFLKQMRLLKNMGSLGGVMKLIPGMNKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
A + + E LK EAMI +MT ER +PELLA+SP RR+RVA SG E+ VS+L+
Sbjct: 361 ADLEKGETQLKRTEAMINSMTKAERAEPELLAQSPSRRRRVASGSGFLERDVSKLIKDFT 420
Query: 504 QMRVRMK 510
+MR M+
Sbjct: 421 RMRSLMQ 427
>gi|291567513|dbj|BAI89785.1| signal recognition particle protein [Arthrospira platensis NIES-39]
Length = 470
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/429 (56%), Positives = 319/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +T+ NI E ++++RRALLEADV+L VV+ F++ V QA
Sbjct: 1 MFDALSERLESAWKKLRGQDKITESNIQEALKEVRRALLEADVNLMVVKDFIKEVGVQAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GV+P QQ +KIV DELVK+MG L A+ PT++L+AGLQG GKTT SAKL
Sbjct: 61 GSQVVSGVKPGQQFIKIVHDELVKVMGESNVPLAEAQQPPTIVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ +S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G + P +IA+QG+E K
Sbjct: 121 ALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDADPVEIARQGIEYGKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +D +I+DTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TFN IG
Sbjct: 181 QGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALS++ VSG PIK VG GE++E L+PFYP+RMA RILGMGD+L
Sbjct: 241 ITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKA+E DAE+MQ+KI+ A FDF DFLKQTR + MGS+ ++ +IPGM KI+
Sbjct: 301 TLVEKAEEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQ 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ E LK EAMI +MT EER+ PELL+ SP RRKRVA+ +G E+ V +LV+
Sbjct: 361 EQLDAGESQLKRSEAMINSMTIEERKNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSLMQQM 429
>gi|218441087|ref|YP_002379416.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
gi|218173815|gb|ACK72548.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
Length = 488
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/429 (56%), Positives = 320/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +++ NI E ++++RRAL+ ADV+L VV+ FV V ++A+
Sbjct: 1 MFDALAERLEDAWKKLRGQDKISQSNIQEALKEVRRALISADVNLQVVKGFVAEVEKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A + PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKVMGESNIPLAKASTPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ ++C++VA DVYRPAAIDQL+ LG+Q+ VPV+ GT+ P +IA+ G+E+AK+
Sbjct: 121 ALFLRKEKRTCLMVATDVYRPAAIDQLITLGQQIEVPVFEMGTDADPVEIARLGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID+ MM EL +K + P + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVIIDTAGRLQIDQDMMGELARIKATVKPDDTLLVVDAMTGQEAATLTHTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV++VSG+PIK VG GE++E L+PFYP+RMA RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQVSGQPIKFVGVGEKVEALQPFYPERMASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+MQ KI+ A FDFNDFLKQ R + MGS+ ++ +IPGMGK++
Sbjct: 301 TLVEKAQEELDLSDVEKMQSKILQAQFDFNDFLKQMRLLKNMGSLGGLLKLIPGMGKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + + E LK E+MI +MT EER P+LLA SP RR+R+A+ SG +E VS L+
Sbjct: 361 SDIAKGETELKRTESMINSMTKEERANPDLLASSPGRRRRIAKGSGHSESDVSNLIKNFT 420
Query: 504 QMRVRMKNL 512
+MR MK +
Sbjct: 421 RMRAMMKQM 429
>gi|126658775|ref|ZP_01729919.1| signal recognition particle protein [Cyanothece sp. CCY0110]
gi|126619873|gb|EAZ90598.1| signal recognition particle protein [Cyanothece sp. CCY0110]
Length = 488
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/416 (57%), Positives = 315/416 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +T+ N+ + ++++RRALLEADV+L VV+ F+ V + A+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKITEANMQDALKEVRRALLEADVNLQVVKTFIADVEKAAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQL+KIV DELVK+MG L A++ PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGVNPGQQLIKIVYDELVKVMGESNVPLAQAENAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +S ++VA D+YRPAAIDQL+ LGEQ+ VPV+ G + P IA QG+E+AK+
Sbjct: 121 ALYLRKQQRSALMVATDIYRPAAIDQLITLGEQIDVPVFELGNQANPVDIATQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D VI+DTAGRLQID+ MM EL VK+ +NP + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 MGIDTVIIDTAGRLQIDEEMMLELSRVKKAVNPDDTLLVVDAMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTK+DGD+RGGAALSV+++SG+PIK VG GE++E L+PFYPDRMA RIL MGDVL
Sbjct: 241 VTGAILTKMDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+MQ KI+ A FDFNDFLKQ R + MGS ++ MIPGM K++
Sbjct: 301 TLVEKAQEEIDLSDVEQMQSKILEAKFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLST 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + E LK EAMI +MT EER+ P+LLA+SP RR+R+A+ SG E +VS+L+
Sbjct: 361 KDIEKGEGELKRTEAMISSMTLEERKNPDLLAKSPNRRRRIAKGSGHPETEVSKLI 416
>gi|220909384|ref|YP_002484695.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
gi|219865995|gb|ACL46334.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
Length = 489
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/429 (57%), Positives = 330/429 (76%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEAAW KL+G++ +++ NI E +R++RRALLEADV+L VV+ F++ V +A+
Sbjct: 1 MFDALSERLEAAWKKLRGQDKISETNIQEALREVRRALLEADVNLQVVKDFIEEVRVKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I G+RPDQQ +KIV DELV++MG + L A++ PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGIRPDQQFIKIVYDELVQVMGETNAPLAEAETAPTIVLMAGLQGTGKTTAAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ +S +LVA D+YRPAAIDQLV LG+Q+ VPV+ GTEV P +IA+QG+E +
Sbjct: 121 ALHLRKQNRSALLVATDIYRPAAIDQLVTLGKQIDVPVFQLGTEVNPVEIARQGVEHGRS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
NVD VIVDTAGRLQID MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LNVDTVIVDTAGRLQIDPEMMAELAQIKTTIAPQETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+++SG+PIK +G GE++E L+PFYPDR+A R+LGMGDVL
Sbjct: 241 ITGAILTKMDGDTRGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRLASRVLGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE++ +KI+ A FDF DFLKQTR + MGS+ ++ +IPGM KI+
Sbjct: 301 TLVEKAQEEVDLADAEKLSRKILEAKFDFTDFLKQTRLLKNMGSLGGIMKLIPGMNKISA 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK E+MI +MTP+ER PELL+ SP RR+R+A+ SG + + VS+LV+
Sbjct: 361 DQLQKGEDQLKRAESMINSMTPDERRNPELLSSSPSRRRRIAKGSGHSLEDVSKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|428200946|ref|YP_007079535.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
gi|427978378|gb|AFY75978.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
Length = 486
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/429 (56%), Positives = 318/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G+ +++ NI + ++++RRALLEADV+L VV+ FV V ++A+
Sbjct: 1 MFDALAERLEDAWKKLRGQNKISQSNIQDALQEVRRALLEADVNLQVVKTFVAEVEKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKVMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ ++C++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+ G+E AK+
Sbjct: 121 ALYLRKQNQTCLMVATDVYRPAAIDQLITLGQQIDVPVFEMGSDADPVEIARAGVERAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D V++DTAGRLQID+ MM EL +K +NP + LLVVDAMTGQEAA L TF +IG
Sbjct: 181 MGIDTVLIDTAGRLQIDRDMMAELARIKATVNPHDTLLVVDAMTGQEAANLTRTFQEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV++VSG+PIK VG GE++E L+PFYPDRMA RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+MQ KI+ A FDFNDFLKQ R + MGS+ ++ MIPG K++
Sbjct: 301 TLVEKAQEQIDIADVEKMQSKILEAKFDFNDFLKQMRLLKNMGSLGGLLKMIPGFNKLSG 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + + E LK EAMI +MT EER P+LLA+SP RR+R+A+ SG E V++LV+
Sbjct: 361 SDIEKGETELKRTEAMINSMTTEERANPDLLAKSPNRRRRIARGSGYEESDVTKLVSNFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRNMMQQM 429
>gi|172038385|ref|YP_001804886.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|354554267|ref|ZP_08973572.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
gi|171699839|gb|ACB52820.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|353553946|gb|EHC23337.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
Length = 489
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/416 (57%), Positives = 315/416 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +T+ N+ + ++++RRALLEADV+L VV+ F+ V + A+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKITEANMQDALKEVRRALLEADVNLQVVKTFIADVEKAAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQL+KIV DELVK+MG L A++ PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGVNPGQQLIKIVYDELVKVMGESNVPLAQAENAPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ ++ ++VA D+YRPAAIDQLV LGEQ+ VPV+ G + P IA QG+E+AK+
Sbjct: 121 ALYLRKQQRTALMVATDIYRPAAIDQLVTLGEQIEVPVFELGNQANPVDIATQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D VI+DTAGRLQID+ MM EL VK+ +NP + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 MGIDTVIIDTAGRLQIDEEMMLELARVKKAVNPDDTLLVVDAMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTK+DGD+RGGAALSV+++SG+PIK VG GE++E L+PFYPDRMA RIL MGDVL
Sbjct: 241 VTGAILTKMDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+MQ KI+ A FDFNDFLKQ R + MGS ++ MIPGM K++
Sbjct: 301 TLVEKAQEEIDLSDVEQMQSKILEAKFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLST 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + E LK EAMI +MT EER+ P++LA+SP RR+R+AQ SG E +VS+L+
Sbjct: 361 KDIEKGEGELKRTEAMISSMTLEERKNPDILAKSPSRRRRIAQGSGHPEAEVSKLI 416
>gi|67924644|ref|ZP_00518055.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|416379090|ref|ZP_11683820.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
gi|67853517|gb|EAM48865.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|357265970|gb|EHJ14666.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
Length = 488
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/416 (57%), Positives = 314/416 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +T+ N+ + ++++RRALLEADV+L VV+ F+ V + A+
Sbjct: 1 MFDALADRLEDAWKKLRGQDKITEANMQDALKEVRRALLEADVNLQVVKTFIAEVEKAAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQL+KIV DELVK+MG L A+ PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGVNPGQQLIKIVYDELVKVMGESNVPLAQAEKSPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ YL+KQ ++C++VA D+YRPAAIDQL LGEQ+ VPV+ GT+ P IA QG+ +AK+
Sbjct: 121 SLYLRKQERTCLMVATDIYRPAAIDQLKTLGEQIEVPVFELGTQANPVDIATQGVAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D VI+DTAGRLQID+ MM EL VK+ +NP + LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 MGIDTVIIDTAGRLQIDEEMMLELARVKKAVNPDDTLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTK+DGD+RGGAALSV+++SG+PIK VG GE++E L+PFYPDRMA RIL MGDVL
Sbjct: 241 VTGAILTKMDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+MQ KI+ A FDFNDFLKQ R + MGS ++ MIPGM K++
Sbjct: 301 TLVEKAQEEIDLSDVEQMQSKILEAKFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLSS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + E LK EAMI +MT EER+ P+LLA+SP RR+R+A+ SG E +VS+L+
Sbjct: 361 TDIEKGEGELKRTEAMISSMTLEERKNPDLLAKSPNRRRRIAKGSGHPEAEVSKLI 416
>gi|22299516|ref|NP_682763.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
gi|22295699|dbj|BAC09525.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
Length = 469
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/429 (57%), Positives = 326/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW L+G++ +T+ NI E +R++RRALLEADV+L V + F++ V ++A+
Sbjct: 1 MFDALAERLESAWKTLRGQDKITENNIQEALREVRRALLEADVNLQVAKDFIENVRQRAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV D LV++MG S L + PT+IL+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGVRPDQQFIKIVYDALVEVMGESHSPLAHVEPPPTIILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+G+S +LVA DVYRPAAIDQL+ LG+Q+GVPV+ GTEV P +IA+QG+ +AK+
Sbjct: 121 ALHLRKEGRSTLLVATDVYRPAAIDQLMTLGKQIGVPVFEMGTEVSPVEIARQGVAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID MM EL +K + P E LLVVDAMTGQEAA L F+ ++G
Sbjct: 181 LGVDTVIIDTAGRLQIDAEMMAELAAIKEGVQPHETLLVVDAMTGQEAANLTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV++VSG+PIK +G GE++E L+PFYPDR+A RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQVSGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+M +KI+ A FDF+DFLKQ R + MGS++ +I +IPGM KI+
Sbjct: 301 TLVEKAQEEVDLADAEKMSRKILEAQFDFDDFLKQLRLLKNMGSLAGIIKLIPGMNKIST 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E+ LK EAMI +MT EER PELLA SP RR+RVA+ SG V++LV+
Sbjct: 361 EQLQQGEQQLKRAEAMINSMTREERRNPELLASSPSRRERVAKGSGYQVADVTKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 RMRSLMQQM 429
>gi|81300580|ref|YP_400788.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
gi|2126515|pir||S68160 probable RNA binding protein ffh - Synechococcus sp. (strain PCC
7942)
gi|81169461|gb|ABB57801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
Length = 496
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/413 (58%), Positives = 319/413 (77%), Gaps = 1/413 (0%)
Query: 81 RAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSE 140
R+ MF L LE AW KL+G++ +++ N+ E ++++RRALLEADV+L VV+ F+ V E
Sbjct: 9 RSFMFDALAERLEQAWTKLRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQE 68
Query: 141 QAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVS 200
+AVG +I G+RPDQQ +K+V DELV++MG L A PTVIL+AGLQG GKTT +
Sbjct: 69 KAVGTQVISGIRPDQQFIKVVYDELVQVMGETHVPLAQAAKAPTVILMAGLQGAGKTTAT 128
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
AKLA +L+K+G+S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E+
Sbjct: 129 AKLALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEK 188
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
A+++ +D VIVDTAGRLQID MM+EL VK + P EVLLVVD+M GQEAA+L +F+
Sbjct: 189 ARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHE 248
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
IGITGAILTKLDGDSRGGAALS++ VSG+PIK VG GE++E L+PF+P+RMA RILGMG
Sbjct: 249 RIGITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRILGMG 308
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-G 439
DVL+ VEKAQE + D E+MQ+KI++A FDF DFLKQ R + MGS++ I +IPG+ G
Sbjct: 309 DVLTLVEKAQEEIDLADVEKMQEKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGG 368
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTE 492
KI Q+R+ E+ LK +EAMI +MTP+ER P+LL+ SP RR R+A+ G+TE
Sbjct: 369 KINDEQLRQGERQLKRVEAMINSMTPQERRDPDLLSNSPSRRHRIAKGCGQTE 421
>gi|443316813|ref|ZP_21046243.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
gi|442783601|gb|ELR93511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
Length = 494
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/430 (58%), Positives = 329/430 (76%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE AW KL+G++ ++ NI + +R++RRALLEADV+L VV+ F+ V QA+
Sbjct: 1 MFEALSERLEGAWKKLRGQDKISATNIEDALREVRRALLEADVNLQVVKTFIAEVQNQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I G+ P QQ +KIV DELVKLMG S L A S PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVITGINPGQQFIKIVNDELVKLMGESNSPLAQADSGPTVVLMAGLQGTGKTTAAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ ++ +LVA DVYRPAA+DQL+ LG+Q+ VPV+ GT+ P IA+QGLE+A++
Sbjct: 121 ALHLRKEKRTTLLVATDVYRPAAVDQLITLGKQIDVPVFDLGTDANPVDIARQGLEKARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VD VIVDTAGRLQID AMM EL +K V+ P EVLLVVDAMTGQEAA L TF+ EIG
Sbjct: 181 LDVDTVIVDTAGRLQIDPAMMAELAQIKAVIQPHEVLLVVDAMTGQEAANLTRTFHEEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGD+RGGAALSV+++SG+PIK +G GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDARGGAALSVRQISGQPIKFIGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ VEKAQE + D E++QKKI+ A FDFNDF+KQ R + MGS ++ +IPGM GKI+
Sbjct: 301 TLVEKAQEAVDIADVEKLQKKIIEAKFDFNDFIKQMRLMKTMGSFGGILKLIPGMAGKIS 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q+++ E LK +EAMI +MT ER++PELL+ SP RR+R+AQ SG E+ VS+LV+
Sbjct: 361 DEQLQQGEVQLKRVEAMIGSMTKSERQQPELLSSSPSRRRRIAQGSGYQEKDVSKLVSDF 420
Query: 503 FQMRVRMKNL 512
+MR M+ +
Sbjct: 421 QKMRSMMQQM 430
>gi|2500884|sp|Q55311.1|SRP54_SYNE7 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1279743|emb|CAA63054.1| signal sequence binding protein [Synechococcus elongatus PCC 7942]
Length = 485
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/410 (58%), Positives = 317/410 (77%), Gaps = 1/410 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +++ N+ E ++++RRALLEADV+L VV+ F+ V E+AV
Sbjct: 1 MFDALAERLEQAWTKLRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I G+RPDQQ +K+V DELV++MG L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GTQVISGIRPDQQFIKVVYDELVQVMGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+G+S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E+A++
Sbjct: 121 ALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEKARQ 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +D VIVDTAGRLQID MM+EL VK + P EVLLVVD+M GQEAA+L +F+ IG
Sbjct: 181 EGIDTVIVDTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALS++ VSG+PIK VG GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ VEKAQE + D E+MQ+KI++A FDF DFLKQ R + MGS++ I +IPG+ GKI
Sbjct: 301 TLVEKAQEEIDLADVEKMQEKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKIN 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTE 492
Q+R+ E+ LK +EAMI +MTP+ER P+LL+ SP RR R+A+ G+TE
Sbjct: 361 DEQLRQGERQLKRVEAMINSMTPQERRDPDLLSNSPSRRHRIAKGCGQTE 410
>gi|412993787|emb|CCO14298.1| signal recognition particle protein [Bathycoccus prasinos]
Length = 571
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/503 (53%), Positives = 351/503 (69%), Gaps = 17/503 (3%)
Query: 71 RRNGR-RRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLP 129
++N R +++RA+ F L++ L+ AW K+KG L+ ENI P++D+RRALLEADVSLP
Sbjct: 56 KKNDRASSIVIRADAFNNLSATLDEAWAKMKGVADLSPENIKAPLKDVRRALLEADVSLP 115
Query: 130 VVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR---PTVI 186
VVRRF++ V E+A GV + +GV P Q+LVK+V DEL LMGG ++ + + PTVI
Sbjct: 116 VVRRFIKKVEERAPGVKVTKGVEPSQELVKLVADELCTLMGGVGADGINFREEGNGPTVI 175
Query: 187 LLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGT 246
L+AGLQGVGKTT KLA LKKQ K+C+LVA DVYRPAAIDQL LG + VPVY G
Sbjct: 176 LMAGLQGVGKTTACGKLALSLKKQNKTCLLVATDVYRPAAIDQLKKLGSDLNVPVYDEGA 235
Query: 247 EVKPSQIAKQGLEEAKKK-NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDA 305
P IA G+ EAKK+ ++DVVIVDTAGRL ID+A+M+EL K E LLVVDA
Sbjct: 236 NASPPSIAANGVAEAKKRGDIDVVIVDTAGRLNIDEALMNELIATKMSTQADETLLVVDA 295
Query: 306 MTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLE 365
MTGQEAA L +F I ITGAILTKLDGD+RGGAALSV+EVSGKPIK G GE+M+ L+
Sbjct: 296 MTGQEAATLTKSFADAIDITGAILTKLDGDTRGGAALSVREVSGKPIKFTGVGEKMDALD 355
Query: 366 PFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARM 425
PFYP+RM RILGMGDV+SFVEKAQE ++Q DAE+M++KIM A FDF+DFLK + M
Sbjct: 356 PFYPERMTSRILGMGDVVSFVEKAQEAVKQADAEQMKEKIMKATFDFDDFLKNMDMMGDM 415
Query: 426 GSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV---RRK 482
GSMS+++ MIPG K++ ++EAEKS KI +++I +MTPEER+ P++L S RR
Sbjct: 416 GSMSQLMKMIPGANKLSDKDMQEAEKSFKIAKSLIMSMTPEERKYPDMLVASSTAESRRN 475
Query: 483 RVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSL---PALSNLE-DALKSE-- 534
R+ + +GKTE+ +++L+ MRV+M+ + M E L P LS+ E L SE
Sbjct: 476 RIVKGAGKTEEDLAELIVMFGGMRVKMQQMSAAMGSEAAKLGLQPQLSSDEMTKLASEKV 535
Query: 535 -QKAPPGTARRKRRSESRRQFVD 556
++ PG RR + + + V+
Sbjct: 536 RKRIKPGHVRRNKAKKVPKSLVE 558
>gi|170078230|ref|YP_001734868.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
gi|169885899|gb|ACA99612.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
Length = 478
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/424 (57%), Positives = 320/424 (75%), Gaps = 1/424 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW L+G++ +++ NI E ++++RRALLEADV+L VV+ F+ V + AV
Sbjct: 1 MFDALAERLEDAWKSLRGQDKISESNIKEALKEVRRALLEADVNLQVVKGFISDVEKAAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG L A+++P+VIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAEAENKPSVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ YL+KQ K+ ++VA DVYRPAAIDQL LGEQ+ VPV+ G++ P IAKQG+E+AK+
Sbjct: 121 SLYLRKQNKTALMVATDVYRPAAIDQLKTLGEQIDVPVFDLGSDANPVDIAKQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VDVV+VDTAGRLQID MM ELK +K +NP + LLVVD+MTGQEAA+L TF+ EIG
Sbjct: 181 LGVDVVLVDTAGRLQIDADMMAELKQIKESINPDDTLLVVDSMTGQEAASLTRTFHEEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTK+DGD+RGGAALSV+ +SG+PIK +G GE++E LEPFYPDR+A RIL MGDVL
Sbjct: 241 VTGAILTKMDGDTRGGAALSVRMISGQPIKFIGVGEKVEALEPFYPDRLASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KIT 442
+ VEKAQE + D EEMQ K++ A FDF+DFLKQ R + MGS+ ++ +IPGMG KI
Sbjct: 301 TLVEKAQEAVDLSDVEEMQAKLLEARFDFDDFLKQMRLLKNMGSLGGMLKLIPGMGNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + E LK +E MI +MT EER+ P++LA++P RR R+A+ SG +E+ VS+L+A
Sbjct: 361 KNMLEQGEVQLKRVETMINSMTKEERKNPDVLAQTPKRRTRIAKGSGLSEKDVSKLIADF 420
Query: 503 FQMR 506
+MR
Sbjct: 421 TRMR 424
>gi|56752330|ref|YP_173031.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
gi|56687289|dbj|BAD80511.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
Length = 496
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/413 (57%), Positives = 317/413 (76%), Gaps = 1/413 (0%)
Query: 81 RAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSE 140
R+ MF L LE AW KL+G++ +++ N+ E ++++RRALLEADV+L VV+ F+ V E
Sbjct: 9 RSFMFDALAERLEQAWTKLRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQE 68
Query: 141 QAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVS 200
+AVG +I G+RPDQQ +K+V DELV++MG L A PTVIL+AGLQG GKTT +
Sbjct: 69 KAVGTQVISGIRPDQQFIKVVYDELVQVMGETHVPLAQAAKAPTVILMAGLQGAGKTTAT 128
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
AKLA +L+K+G+S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E+
Sbjct: 129 AKLALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEK 188
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
A+++ +D VIVDTAGRLQID MM+EL VK + P EVLLVVD+M GQEA +L +F+
Sbjct: 189 ARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAPSLTRSFHE 248
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
IGITGAILTKLDGDSRGGAALS++ VSG PIK VG GE++E L+PF+P+RMA RILGMG
Sbjct: 249 RIGITGAILTKLDGDSRGGAALSIRRVSGHPIKFVGLGEKVEALQPFHPERMASRILGMG 308
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-G 439
DVL+ VEKAQE + D E+MQ+KI++A FDF DFLKQ R + MGS++ I +IPG+ G
Sbjct: 309 DVLTLVEKAQEEIDLADVEKMQEKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGG 368
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTE 492
KI Q+R+ E+ LK +EAMI +MTP+ER P+LL+ SP RR R+A+ G+TE
Sbjct: 369 KINDEQLRQGERQLKRVEAMINSMTPQERRDPDLLSNSPSRRHRIAKGCGQTE 421
>gi|434407141|ref|YP_007150026.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
gi|428261396|gb|AFZ27346.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
Length = 484
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/429 (57%), Positives = 325/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEAAW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLEAAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFITQVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L + + TV+L+AGLQG GKTT SAKL
Sbjct: 61 GAEVISGVRPDQQFIKIVYDELVQVMGEENVPLAETEGQTTVVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E A+
Sbjct: 121 ALHLRKLNRSCLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDADPVEIARQGVERARA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V+ VI+DTAGRLQID+ MM EL +K + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 EGVNTVIIDTAGRLQIDEDMMAELARIKATVQPDETLLVVDSMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEEIDLADAEQMQEKILSAKFDFTDFLKQMRLLKNMGSLGGIMKMIPGMGKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LL+ SP RR+R+A +G E VS+LVA
Sbjct: 361 DQLKQGETQLKRCEAMINSMTKQERRDPDLLSSSPSRRRRIANGAGYRESDVSKLVADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|428770653|ref|YP_007162443.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
gi|428684932|gb|AFZ54399.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
Length = 480
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/419 (57%), Positives = 308/419 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE W KL+G+ +++ NI E ++++R+ALLEADV+ VV+ FV V + A+
Sbjct: 1 MFDALAERLEDTWKKLRGQGKISQSNIQEALQEVRKALLEADVNFQVVKSFVAEVEKNAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DELVK+MG + L A P V+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVISGVNPQQQFIKIVYDELVKVMGESNAPLAEADKPPRVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQ +SC++VA DVYRPAAI QL+ LG Q+ VPV+ GT P IA+QGLEEAK
Sbjct: 121 ALYLQKQKRSCLMVATDVYRPAAIQQLITLGTQISVPVFELGTGANPVDIARQGLEEAKN 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K +D VI+DTAGRLQID+ MM EL VK +NP EVLLVVD+MTGQEAA + +F+ EIG
Sbjct: 181 KGIDTVIIDTAGRLQIDQEMMAELAQVKDAVNPDEVLLVVDSMTGQEAANVTRSFHEEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALS++ +SG+PIK +G GE++E LEPFYPDRMA RIL MGD++
Sbjct: 241 ITGAILTKMDGDSRGGAALSIRTISGQPIKFIGVGEKVEALEPFYPDRMASRILNMGDIV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + D E+MQKK+M A FDFNDFLKQ R + MGS + V+ +IPGM K+
Sbjct: 301 TLVEKAQEELDIADVEKMQKKMMEAKFDFNDFLKQMRLLKNMGSFAGVMKLIPGMNKLGA 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + E LK E MI +MT EER P+LLA+SP RR+RVA+ SG E+ VS+LV+
Sbjct: 361 GALEQGEVQLKRTETMINSMTKEERANPQLLAQSPSRRRRVAKGSGHQEKDVSRLVSDF 419
>gi|427733956|ref|YP_007053500.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
gi|427368997|gb|AFY52953.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
Length = 481
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/429 (55%), Positives = 318/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+ W KL+G+ +++ NI E +R++RR+LLEADV+L V++ F+ V +A
Sbjct: 1 MFDALADRLESTWKKLRGQGKISESNIQEALREVRRSLLEADVNLQVIKEFISEVEAKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRP +Q +KIV DELV +MG LV A+ PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVLNGVRPGEQFIKIVHDELVNVMGETNVPLVQAEESPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K ++C++VA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E AK
Sbjct: 121 ALHLRKLERNCLMVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVERAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +D VI+DTAGRLQID+ MM EL VK + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGIDTVIIDTAGRLQIDEDMMAELASVKETVQPHETLLVVDAMTGQEAANLTRTFHEKIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+GAILTKLDGDSRGGAALSV+ +SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ISGAILTKLDGDSRGGAALSVRRISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+M +K++SA FDF DFLKQ R + MGS+ ++ MIPGM KI+
Sbjct: 301 TLVEKAQEEFDLADAEKMTEKMLSAKFDFTDFLKQLRLLKNMGSLGGIMKMIPGMNKISN 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + + L+ EAMI++MT +ER P+LLA SP RR+R+A SG E+ VS+L++
Sbjct: 361 EQLEQGQSQLQRCEAMIKSMTKQERTDPDLLASSPSRRRRIASGSGYKEKDVSKLISDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRNMMQQM 429
>gi|303273580|ref|XP_003056150.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226462234|gb|EEH59526.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 559
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/539 (49%), Positives = 365/539 (67%), Gaps = 17/539 (3%)
Query: 27 SAGKSAKFVSSWAASSDPARLSSTSRNLFTRETWGLINSKSVTIRRNGRRRLIVRAEMFG 86
S K V + + +L TSR R L+ + +R + LI RA+ FG
Sbjct: 21 SHAKKPALVCASKHTKSAVKLQCTSRGSSNRTIQLLLFQQFRPAKRG--KLLITRADSFG 78
Query: 87 QLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVG 146
L+ L +AW+ LK E+ L+ ENI P++DIRRALLEADVSLPVVRRF+++V E+++GV
Sbjct: 79 TLSERLNSAWSALKDEDDLSVENISLPLKDIRRALLEADVSLPVVRRFIKSVEEKSIGVK 138
Query: 147 LIRGVRPDQQLVKIVRDELVKLMGGEVSE-LVFAKSR--PTVILLAGLQGVGKTTVSAKL 203
+ +GV QQL K+V DEL +LMGG + L+F K PTVIL+AGLQGVGKTT KL
Sbjct: 139 VTKGVSASQQLTKVVADELCELMGGFGGDKLIFRKEGEGPTVILMAGLQGVGKTTACGKL 198
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LK QGK +LVA DVYRPAAIDQL LGEQ+ VPV+ GT+ P IA+ G+E+AK
Sbjct: 199 ALFLKAQGKQSLLVATDVYRPAAIDQLKKLGEQIDVPVFELGTDFSPPDIARSGVEKAKL 258
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+N DVVIVDTAGRLQ+D+ +M EL K E LLVVDAMTGQEAA+L FN +G
Sbjct: 259 ENFDVVIVDTAGRLQVDEMLMAELLATKAATRADETLLVVDAMTGQEAASLTAAFNDAVG 318
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTK+DGD+RGGAALSV+EVSGKPIK +G GE+++ LEPF+P+RM RILGMGDV+
Sbjct: 319 ITGAVLTKMDGDTRGGAALSVREVSGKPIKFIGSGEKLDALEPFFPERMTTRILGMGDVV 378
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ +++E A M+ KI+SA FDFNDFL Q + +MG M + M+PGM ++
Sbjct: 379 SLVERAQVAVKEEQANLMRDKILSATFDFNDFLSQLEMMGKMGGMGGLTKMMPGMNTMSD 438
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELL---AESPVRRKRVAQDSGKTEQQVSQLVA 500
++++AEKSL + +++I +MTP ER+ P+LL + + RR RV + SG++++ ++ L+
Sbjct: 439 KELQDAEKSLSVAKSLIMSMTPRERQFPDLLVAGSSAASRRGRVVEGSGRSDKDLANLIV 498
Query: 501 QLFQMRVRMKNLMGVMEG-----GSLPALSNLE-DALKSE---QKAPPGTARRKRRSES 550
MRV+M++L M G G +P LS ++ + L E ++ PG RR++ + S
Sbjct: 499 MFGSMRVKMQSLSAQMNGTAKEVGLVPQLSEVDLNKLAFEGVGKRVSPGMVRRRKLNAS 557
>gi|434384585|ref|YP_007095196.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
gi|428015575|gb|AFY91669.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
Length = 466
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/419 (56%), Positives = 314/419 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF QL LE+AW KL+G++ + NI + ++++RRALL ADV++ VV FV+ V +A
Sbjct: 1 MFDQLAESLESAWVKLRGKDKIKSSNIQDALKEVRRALLSADVNVQVVTNFVKEVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELVK MG S L A ++PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GANVVSGVRPDQQFIKIVYDELVKTMGETNSPLANASTKPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+ ++ ++VA DVYRPAAIDQL+ LG+Q+ VPV+ GT+ P +IA+QG+ +A++
Sbjct: 121 ALHLRKENRTALMVATDVYRPAAIDQLITLGKQIDVPVFDMGTDANPVEIARQGIAKARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VIVDTAGRLQID MM EL DVK + P E+LLVVD+ GQEAA + TF+ IG
Sbjct: 181 LGVDTVIVDTAGRLQIDDRMMTELADVKAAIQPDEILLVVDSAIGQEAANVTMTFHDRIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+ +SG+PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRAISGQPIKFVGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DA ++ +KI+ A FDFNDF+KQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEDFDIADAAKLTEKIIEARFDFNDFIKQMRLLKNMGSLGGLLKMIPGMGKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q+++ E LK EAMI++MT EER P+LLA +P RR+R+A+ G E VS+L+++
Sbjct: 361 GQLKQGEDQLKKAEAMIQSMTKEERGNPDLLASTPSRRRRIAKGCGYNESDVSKLISEF 419
>gi|300867755|ref|ZP_07112400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
gi|300334338|emb|CBN57572.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
Length = 483
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/429 (57%), Positives = 322/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW KL+G++ ++ NI E +R++RRALLEADV+L VV+ F+ V+ +A
Sbjct: 1 MFDALADRLESAWKKLRGQDKISDANIQEALREVRRALLEADVNLQVVKDFIAEVAVKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG S L A S PT++L+AGLQG GKTT SAKL
Sbjct: 61 GAEVISGVRPDQQFIKIVYDELVRVMGETNSPLAIADSAPTIVLMAGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L+KQ +S +LVA D+YRPAAIDQL+ LG+Q+ VPV+ G + P +IA+QG++ A++
Sbjct: 121 ALQLRKQNRSTLLVATDIYRPAAIDQLITLGKQIDVPVFELGKDTDPVEIARQGIDRARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VIVDTAGRLQID+ MM EL +K + P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 LGVDTVIVDTAGRLQIDQDMMAELARIKETIQPHETLLVVDAMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI++A FDF DFLKQ R + MGS+ ++ MIPG+ K++
Sbjct: 301 TLVEKAQEEIDITDAEQMQEKILTAKFDFTDFLKQMRLLKNMGSLGGILKMIPGLNKMSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+R+ E L+ EAMI +MT EER PELL+ SP RR+R+A+ SG E V++LV+
Sbjct: 361 DDMRKGEVQLRRTEAMINSMTTEERRNPELLSSSPSRRRRIAKGSGFVEADVAKLVSDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ L
Sbjct: 421 KMRNMMQQL 429
>gi|428312529|ref|YP_007123506.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
gi|428254141|gb|AFZ20100.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
Length = 481
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/429 (56%), Positives = 325/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ +++ NI E ++++RRALL ADV+L VV+ FV V +A
Sbjct: 1 MFDALAERLEDAWKKLRGQDKISQSNIQEALKEVRRALLSADVNLQVVKDFVADVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +KIV DELV++MG L + PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVLSGVRPDQQFIKIVYDELVQVMGETNIPLAQVDTAPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ ++C+LVA DVYRPAAIDQLV LG+Q+ VPV+ G + P +IA+QG+ AK+
Sbjct: 121 ALHLQKQNRTCLLVATDVYRPAAIDQLVTLGQQINVPVFELGADADPVEIARQGVARAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID+ MM EL +K+ + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 TGVDTVIIDTAGRLQIDQDMMGELARIKQTVQPHETLLVVDSMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+ VSG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRRVSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+K+++A FDF+DFLKQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEEIDLADAEKMQEKMLTAKFDFSDFLKQMRLLKNMGSLGGLMKMIPGMGKLSA 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EA+I +MT EER P+LLA SP RR+R+A+ +G TE+ V+ LV++
Sbjct: 361 DQLQQGETKLKQSEALINSMTAEERRNPDLLASSPSRRRRIARGAGYTERDVTNLVSEFT 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRNLMQQM 429
>gi|414078759|ref|YP_006998077.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|280987222|gb|ADA00385.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|413972175|gb|AFW96264.1| signal recognition particle protein SRP [Anabaena sp. 90]
Length = 482
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/427 (57%), Positives = 322/427 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFISEVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L + TV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVIAGVRPDQQFIKIVYDELVQVMGEENVPLAEVAGKTTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ +SC+LVA D+YRPAAIDQL+ LG+Q+ VPV+ G P +IA+QG+E A+
Sbjct: 121 ALHLRKQDRSCLLVATDIYRPAAIDQLITLGKQIDVPVFELGIAADPVEIARQGVERARA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++ VI+DTAGRLQID+ MM EL +K V+ P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 EGINTVIIDTAGRLQIDEDMMAELARIKEVVQPDETLLVVDAMTGQEAANLTRTFHNQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTK+DGDSRGGAALSV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKMDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ+KI+SA FDF DFLKQ R + MGS+ ++ MIPGM K++
Sbjct: 301 TLVEKAQEEIDLADAEQMQEKILSAKFDFTDFLKQMRLLKNMGSLGGIMKMIPGMNKLSE 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LL+ SP RR+R+A SG E VS+LVA
Sbjct: 361 DQLKQGETQLKRCEAMINSMTGKERRDPDLLSSSPSRRRRIASGSGYREADVSKLVADFQ 420
Query: 504 QMRVRMK 510
+MR M+
Sbjct: 421 KMRSLMQ 427
>gi|428305921|ref|YP_007142746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
gi|428247456|gb|AFZ13236.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
Length = 482
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/441 (57%), Positives = 328/441 (74%), Gaps = 4/441 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW KL+G++ + + NI E +R++RRALL ADV+L VV+ FV V +A+
Sbjct: 1 MFDALAESLEDAWKKLRGQDKIRESNIQEALREVRRALLGADVNLQVVKDFVAEVETKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV D+LV++MG L A++ PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GADVIAGVRPDQQFIKIVYDQLVEVMGETNVPLAKAETSPTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K + +LVA DVYRPAAIDQLV LG+Q+ VPV+ GT+ P +IA+QG+E+AK+
Sbjct: 121 ALHLQKLERRALLVATDVYRPAAIDQLVTLGQQINVPVFAMGTDADPVEIARQGVEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VI+DTAGRLQID+ MM EL +K ++ P E LLVVDAMTGQEAA L TF+ +IG
Sbjct: 181 MGVDTVIIDTAGRLQIDENMMGELARIKEIVQPHETLLVVDAMTGQEAANLTRTFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALSV+ +SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRRISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DA +MQ+K+MSA FDF DFLKQ R + MGS+ ++ MIPGMGK++
Sbjct: 301 TLVEKAQEEIDLVDAAKMQEKMMSAKFDFTDFLKQMRLLKNMGSLGGMLKMIPGMGKLSN 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + E LK E+MI +MT EER P+LL+ SP RR+RVA+ G E VS+LV+
Sbjct: 361 EQLSQGETQLKRAESMINSMTKEERGNPDLLSSSPSRRRRVARGCGYGESDVSKLVSDFT 420
Query: 504 QMRVRMKNLMGVMEGGSLPAL 524
+MR +LM M G++P++
Sbjct: 421 KMR----SLMQQMSQGAMPSM 437
>gi|159903874|ref|YP_001551218.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
gi|159889050|gb|ABX09264.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
Length = 485
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/429 (54%), Positives = 319/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L++ E A L+GE +++ENI ++ +RRALLEADVSL VV+ FV V ++A+
Sbjct: 1 MFDDLSASFEDAIKGLRGENKISEENIGPALKQVRRALLEADVSLSVVKEFVAEVGQKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV+P Q+ V++V+ ELV++MGGE + L +PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVKPGQKFVEVVKQELVEVMGGENAPLANVSEKPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LK QG+ ++VA DVYRPAAI+QL LG Q+ + V++ G+ +KP QIA GLE+A+
Sbjct: 121 ALHLKDQGRKALMVAADVYRPAAIEQLTTLGSQIDIDVFSLGSNLKPEQIAASGLEKARN 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MMDE+ ++ +NP EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDSEMMDEMVRIRSAVNPDEVLLVVDSMIGQEAAELTRAFHEKVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+K++SGKPIK +G GE++E LEPF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIKKISGKPIKFIGTGEKVEALEPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ DAE+MQKK A+FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVEIADAEQMQKKFQEASFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ E+ LK +EAMI +MTP ER +PELLA P RR+RVA SG T + +++A
Sbjct: 361 GMIKSGEEQLKRIEAMIGSMTPAERTQPELLAAQPSRRRRVALGSGHTPADMDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR MK +
Sbjct: 421 KMRGFMKQM 429
>gi|428206885|ref|YP_007091238.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
gi|428008806|gb|AFY87369.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
Length = 487
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/493 (52%), Positives = 341/493 (69%), Gaps = 28/493 (5%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+AW KL+G++ ++ NI E +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALADRLESAWKKLRGQDKISHANIQEALREVRRALLEADVNLQVVKDFIADVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ GVRPDQQ +K+V DELV++MG L A + PT++L+AGLQG GKTT +AKL
Sbjct: 61 GAEVLSGVRPDQQFIKVVYDELVEVMGETNVPLAQADAAPTIVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+KQ SC++VA DVYRPAAIDQLV LG+Q+ VPV+ G+ P +IA++G+E+AK
Sbjct: 121 ALHLRKQDLSCLMVATDVYRPAAIDQLVTLGKQIDVPVFEMGSNADPVEIAREGVEQAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VD VI+DTAGRLQID+ MM EL VK + P E LLVVDAMTGQEAA L TF+ ++G
Sbjct: 181 QGVDTVIIDTAGRLQIDQDMMAELIRVKEAVQPHETLLVVDAMTGQEAANLTRTFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+ +SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRRISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE DAE+MQ+KI+SA FDF DFLKQ R + MGS+ ++ +IPGM K++
Sbjct: 301 TLVEKAQEEFDLADAEKMQEKILSAKFDFTDFLKQMRLLKNMGSLGGIMKLIPGMNKMSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER+ P+LL+ SP RR+R+A+ SG E VS+LV+
Sbjct: 361 DQLKQGETQLKRCEAMINSMTKQERKDPDLLSSSPSRRRRIARGSGYKESDVSKLVSDFQ 420
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDP--ASTR 561
+MR M+ + P + NL DP A +R
Sbjct: 421 RMRAMMQQMGQGG---GFPGMPNL--------------------FGGGGGMGDPYAAGSR 457
Query: 562 PSP---RGFGGGS 571
P+P RG+ GG+
Sbjct: 458 PTPPGWRGYAGGA 470
>gi|86607761|ref|YP_476523.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556303|gb|ABD01260.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 487
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/423 (56%), Positives = 320/423 (75%), Gaps = 1/423 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE AW KL+G++ +T+ NI E +R++RRALL+ADV+L VV++F++ V E A+
Sbjct: 1 MFDALSEKLELAWRKLRGQDKITETNIQEALREVRRALLDADVNLQVVKQFIEDVREAAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV PDQQ +KIV DELVK+MG + A+ PT++L+AGLQG GKTT AKL
Sbjct: 61 GSEVILGVTPDQQFIKIVHDELVKVMGEANVPIAQAEQPPTIVLMAGLQGSGKTTTCAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQGK ++VAGD+YRPAAIDQL LG+Q+ +PV+ G + P +IA+QG+E A++
Sbjct: 121 ALYLRKQGKKSLMVAGDIYRPAAIDQLKTLGQQIQIPVFDLG-KADPVEIARQGVETARQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID MM EL+ +K + P E+LLVVDAM GQEAA+L F+ +G
Sbjct: 180 QGYDYVILDTAGRLQIDLEMMAELERIKAAVQPHEILLVVDAMIGQEAASLTRAFHERLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGD+RGGAALS+++VSG+PIK +G GE++E L+PFYPDRMA RILGMGD+L
Sbjct: 240 ITGAILTKLDGDTRGGAALSIRQVSGQPIKFIGVGEKVEALDPFYPDRMASRILGMGDIL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + DA M +K+M+A FDF DFLKQ R + RMGS++ ++ ++PGMGKI+
Sbjct: 300 SLVEKAQEEIDLGDAASMAEKMMTAQFDFTDFLKQMRLIKRMGSLAGLLRLMPGMGKISE 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ + L EAMI +MTPEER P+LLA S R++RVA+ SG + VS+LV+
Sbjct: 360 EQLQKGQDQLARAEAMINSMTPEERRNPDLLARSVSRKRRVARGSGHKLEDVSRLVSDFQ 419
Query: 504 QMR 506
+MR
Sbjct: 420 RMR 422
>gi|427725123|ref|YP_007072400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
gi|427356843|gb|AFY39566.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
Length = 481
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/424 (54%), Positives = 317/424 (74%), Gaps = 1/424 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE AW L+G++ +++ N+ + ++++RRALLEADV+L VV+ F+ V + A+
Sbjct: 1 MFDALAERLEDAWKSLRGQDKISESNVKDALKEVRRALLEADVNLQVVKGFIGDVEKAAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ +KIV DEL+K+MG + L A+++PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GADVISGVNPGQQFIKIVNDELIKIMGESNAPLAEAENKPTVILMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ +L+KQ K+ ++VA DVYRPAAIDQL LG Q+ VPV+ G++ P +IA+QG+E+ K+
Sbjct: 121 SLFLRKQEKTTLMVATDVYRPAAIDQLKTLGAQIDVPVFDLGSDANPVEIARQGIEKGKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VD VIVDTAGRLQID MM ELK +K + P + LLVVDAMTGQEAA+L TF+ EIG
Sbjct: 181 LGVDYVIVDTAGRLQIDADMMGELKQIKDTIQPDDTLLVVDAMTGQEAASLTRTFHTEIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTK+DGD+RGGAALSV+ +SG+PIK +G GE++E L+PFYPDRMA RIL MGDVL
Sbjct: 241 VTGAILTKMDGDTRGGAALSVRTISGQPIKFIGVGEKVEALDPFYPDRMASRILNMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KIT 442
+ VEKAQE + D EEMQ K++ A FDF+DF+KQ R + MGS+ ++ +IPGMG K+
Sbjct: 301 TLVEKAQEAIDLSDVEEMQSKLLEARFDFDDFVKQMRLLKNMGSLGGLMKLIPGMGSKLD 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + E LK +E MI +MT EER+ P+LLA++P RR R+A+ SG +++ VS+L+
Sbjct: 361 SGMLEQGEAQLKRVEIMINSMTKEERKNPDLLAQTPKRRTRIAKGSGMSDKDVSKLITDF 420
Query: 503 FQMR 506
+MR
Sbjct: 421 TRMR 424
>gi|440681861|ref|YP_007156656.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
gi|428678980|gb|AFZ57746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
Length = 482
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/429 (56%), Positives = 323/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+AW KL+G++ +++ NI + +R++RRALLEADV+L VV+ F+ V +A
Sbjct: 1 MFDALSDRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFIAEVETKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GVRPDQQ +KIV DELV++MG E L + + TV+L+AGLQG GKTT +AKL
Sbjct: 61 GSEVISGVRPDQQFIKIVYDELVQVMGEENVPLAEVEGKTTVVLMAGLQGTGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K +SC+LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +IA+QG+E A+
Sbjct: 121 ALHLRKLNRSCLLVATDVYRPAAIDQLLTLGKQIDVPVFELGSDADPVEIARQGVERARA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++ VIVDTAGRLQID+ MM EL +K + P E LLVVD+MTGQEAA L TF+ +IG
Sbjct: 181 EGINTVIVDTAGRLQIDQEMMAELARIKSTIEPDETLLVVDSMTGQEAANLTRTFHDQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGAILTKLDGDSRGGAALSV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE + DAE+MQ KI+SA FDF DFLKQ R + MGS+ ++ MIPGM K++
Sbjct: 301 TLVEKAQEEIDLADAEQMQAKILSAKFDFTDFLKQMRLLKNMGSLGGIMKMIPGMNKLSD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ E LK EAMI +MT +ER P+LL+ SP RR+R+A +G E VS+LVA
Sbjct: 361 DQLKQGETQLKRCEAMINSMTRQERLDPDLLSSSPSRRRRIASGAGYREADVSKLVADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRSLMQQM 429
>gi|255070283|ref|XP_002507223.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226522498|gb|ACO68481.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 568
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/492 (52%), Positives = 348/492 (70%), Gaps = 18/492 (3%)
Query: 73 NGRRR---LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLP 129
G RR ++ RA FG LT L + W LK E+ L+ ENI P++DIRRALLEADVSLP
Sbjct: 70 GGSRRGETMLRRASAFGSLTERLNSVWATLKDEDDLSLENIKGPLKDIRRALLEADVSLP 129
Query: 130 VVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE-LVFAKSR--PTVI 186
VVRRF++ + ++A+G + +GV QQL K+V DEL +LMGG + L F PTVI
Sbjct: 130 VVRRFIKNIEQKAIGTRVTKGVNAGQQLTKVVADELCELMGGFGGDSLAFKDPSMGPTVI 189
Query: 187 LLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGT 246
L+AGLQGVGKTT KLA YLKKQGK +LVA DVYRPAAI+QL LGEQV PV+ G
Sbjct: 190 LMAGLQGVGKTTACGKLALYLKKQGKDSLLVATDVYRPAAIEQLKRLGEQVKTPVFDMGV 249
Query: 247 EVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAM 306
V P ++A+ GLE+A+ + +DVVI+DTAGRLQ+D +M+EL+ K E+LLVVDAM
Sbjct: 250 RVDPPEVARLGLEKARAEGIDVVIIDTAGRLQVDVHLMEELRATKIATAADEILLVVDAM 309
Query: 307 TGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEP 366
TGQEAAAL F+ +GITGA+LTK+DGD+RGGAALSV+EVSGKPIK G GE+ME LEP
Sbjct: 310 TGQEAAALTAAFDEAVGITGAVLTKMDGDTRGGAALSVREVSGKPIKFTGVGEKMEALEP 369
Query: 367 FYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMG 426
FYP+RMA RILGMGDV++ VE+AQ+V++ E+AE+M+ KI+SA FDFNDF+KQ + +MG
Sbjct: 370 FYPERMASRILGMGDVVTLVERAQQVVKNEEAEQMRDKILSATFDFNDFIKQMEMMGQMG 429
Query: 427 SMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELL---AESPVRRKR 483
M + ++PGM ++ +++EA+KSLK+ +++I +MT +ER+ P++L A + RRKR
Sbjct: 430 GMDGFMKLLPGMSGMSEREMQEADKSLKVAKSLILSMTSKERQFPDILVAGASAKSRRKR 489
Query: 484 VAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS-----LPALSNLE-DALKSE--- 534
+ + +G++E+ +SQL+ MRV+M+ + + G S P LS + + L +E
Sbjct: 490 IIEGAGRSEKDLSQLIVLFGSMRVKMQKMTAEITGASAEVGLTPQLSEEDMNTLANEGLR 549
Query: 535 QKAPPGTARRKR 546
+ PG RR R
Sbjct: 550 KNVSPGMVRRLR 561
>gi|145341290|ref|XP_001415746.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144575969|gb|ABO94038.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 498
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/482 (51%), Positives = 337/482 (69%), Gaps = 14/482 (2%)
Query: 79 IVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 138
+ RA+ F ++ L+ AW +L+GE+ L +N+ P++D+RRALLEADVSLPVVRRF+
Sbjct: 1 MTRADAFAGMSDKLDKAWARLQGEKDLNADNVKAPLKDVRRALLEADVSLPVVRRFIARC 60
Query: 139 SEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKS--RPTVILLAGLQGVGK 196
E+AVG+ + +GV P Q LVK V DEL +LMGG +E + + PTV+L+AGLQGVGK
Sbjct: 61 EEKAVGMKVTKGVEPGQMLVKCVADELCELMGGVGAEGIKFRDDGEPTVVLMAGLQGVGK 120
Query: 197 TTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQ 256
TT KL+ L+KQGKS +LVA DVYRPAAIDQL LG+Q+GVPV+ G + P +IA +
Sbjct: 121 TTACGKLSLALRKQGKSVLLVATDVYRPAAIDQLKTLGKQIGVPVFDMGVDGNPPEIAAR 180
Query: 257 GLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVT 316
G+ +AK +++DVVIVDTAGRL ID+ +M ELK K + E LLVVDAMTGQEAA L
Sbjct: 181 GVRKAKDEDIDVVIVDTAGRLNIDEKLMGELKATKEATSADETLLVVDAMTGQEAATLTA 240
Query: 317 TFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRI 376
+FN + ITGAILTK+DGD+RGGAALSV+EVSGKPIK G GE+M+ LEPFYP+RM RI
Sbjct: 241 SFNEAVEITGAILTKMDGDTRGGAALSVREVSGKPIKFTGVGEKMDALEPFYPERMTSRI 300
Query: 377 LGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP 436
LGMGD++S VEK Q +++E+AE++++KIMSA FDFNDF+ Q + MG M +++ M+P
Sbjct: 301 LGMGDIVSLVEKVQAGVKEEEAEKIKQKIMSATFDFNDFVGQLEMMNNMGGMKQIMQMMP 360
Query: 437 GMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV---RRKRVAQDSGKTEQ 493
G K++ A + A KS+ I +++I +MT EER+ P++L S RR+R+ + SG+TE
Sbjct: 361 GTAKLSEADMEAAGKSMTIAKSLINSMTKEERQYPDMLVASTTADSRRQRIVKGSGRTEA 420
Query: 494 QVSQLVAQLFQMRVRMKNLMGVMEG-----GSLPALSNLEDAL----KSEQKAPPGTARR 544
++QL+ MR +M+ + G + G G P LS E + K + PG RR
Sbjct: 421 DLAQLIMMFGGMRTQMQKMSGQLGGQAGDVGLQPQLSEAELSKLAMNKIRKTVKPGMVRR 480
Query: 545 KR 546
++
Sbjct: 481 QK 482
>gi|86605764|ref|YP_474527.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
gi|86554306|gb|ABC99264.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
Length = 483
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/443 (54%), Positives = 324/443 (73%), Gaps = 5/443 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE AW KL+G++ +T+ NI E +R++RRALL+ADV+L VV++F++ V + A+
Sbjct: 1 MFDALSEKLELAWRKLRGQDKITETNIQEALREVRRALLDADVNLQVVKQFIEDVRQAAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV PDQQ +KIV DELVK+MG + A+ PT++++ GLQG GKTT AKL
Sbjct: 61 GAEVILGVTPDQQFIKIVHDELVKVMGEANVPIAQAEQPPTIVVMVGLQGSGKTTTCAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+KQGK +LVAGD+YRPAAIDQL LG+Q+ +PV+ G + P +IA+QG+ A++
Sbjct: 121 ALYLRKQGKRPLLVAGDIYRPAAIDQLKTLGQQIQIPVFDLG-KTDPVEIARQGVAAARE 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID MM EL+ +K + P E+LLVVDAM GQEAA L F+ +G
Sbjct: 180 QGYDYVILDTAGRLQIDLEMMAELERIKAAVQPHEILLVVDAMIGQEAANLTQAFHERLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGDSRGGAALS+++VSG+PIK VG GE++E L+PFYPDRMA RILGMGD+L
Sbjct: 240 LTGTILTKLDGDSRGGAALSIRQVSGQPIKFVGVGEKVEALDPFYPDRMASRILGMGDIL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + DA M +K+M+A FDF DFLKQ R + RMGS++ ++ ++PGMGKI+
Sbjct: 300 SLVEKAQEEIDLGDAARMAEKMMTAQFDFTDFLKQMRLIKRMGSLAGLLRLMPGMGKISE 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+++ + L EAMI +MTPEER P+LLA S R++RVA SG + VS+LV+
Sbjct: 360 EQLQKGQDQLARAEAMINSMTPEERRNPDLLARSVSRKRRVALGSGHKLEDVSRLVSDFQ 419
Query: 504 QMRVRMKNL----MGVMEGGSLP 522
+MR M+++ + M GG P
Sbjct: 420 RMRDMMRSMSLGGLAGMPGGRGP 442
>gi|87125498|ref|ZP_01081343.1| Signal recognition particle protein [Synechococcus sp. RS9917]
gi|86166798|gb|EAQ68060.1| Signal recognition particle protein [Synechococcus sp. RS9917]
Length = 492
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/429 (52%), Positives = 322/429 (75%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++ +++ N+ ++++RRALLEADVSLPVV+ FV V ++AV
Sbjct: 1 MFDELSARFEDAVKGLRGQDKISETNVEGALKEVRRALLEADVSLPVVKDFVAEVRQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RG+ PDQ+ +++V D+LV++MGG + L A+ PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GADVVRGISPDQKFIQVVHDQLVEVMGGGNAPLARAEQAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YLK QG+ ++V DVYRPAAIDQL LGEQ+GV V++ G E KP IA GL +A++
Sbjct: 121 GLYLKDQGRRALMVGADVYRPAAIDQLRTLGEQIGVEVFSLGAEAKPEDIASAGLAKARQ 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID++MMDE+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDQSMMDEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM K+
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKLDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT ER++PELLA P RR+R+A SG + V +++A
Sbjct: 361 GMLKQGEQQLKKIEAMIGSMTVAERQQPELLAAQPSRRRRIASGSGHSPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|148242807|ref|YP_001227964.1| Signal recognition particle protein [Synechococcus sp. RCC307]
gi|147851117|emb|CAK28611.1| Signal recognition particle protein [Synechococcus sp. RCC307]
Length = 493
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/431 (52%), Positives = 321/431 (74%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQ 141
A MF +L+ E A LKGE ++++ N+ ++D+RRALL+ADVSLPVV+ F+ V E+
Sbjct: 3 ALMFEELSQRFEDAVRGLKGEASISEGNVDSALKDVRRALLDADVSLPVVKSFIAEVREK 62
Query: 142 AVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSA 201
A+G ++RGV PDQQ +K+V +ELV++MGG + L A+ PTV+L+AGLQG GKTT +A
Sbjct: 63 ALGADVVRGVSPDQQFIKLVHEELVEVMGGANAPLAKAEQSPTVVLMAGLQGAGKTTATA 122
Query: 202 KLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
KL +LK+QG+ +LVA D YRPAAIDQL LG+Q+ V V++ G + KP IA+ GL +
Sbjct: 123 KLGLHLKEQGRRALLVAADTYRPAAIDQLQTLGQQIDVEVFSLGADAKPEAIAEAGLAKG 182
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
+++ D VIVDTAGRLQID +MM+E+ ++ + P EVLLVVD+M GQEAA L +F+ +
Sbjct: 183 REEGFDTVIVDTAGRLQIDTSMMEEMVRIRSAVAPDEVLLVVDSMIGQEAADLTRSFHEQ 242
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+GITGA+LTK+DGDSRGGAALS+++VSG PIK +G GE++E L+PF+P+RMA RILGMGD
Sbjct: 243 VGITGAVLTKMDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGD 302
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VL+ VEKAQ+ ++ D E+MQ+K+ A+FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 303 VLTLVEKAQKEVEIADVEKMQRKLQEASFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKI 362
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+++ E LK +EAMI +MT +ERE P+LLA P RR+R+A+ SG +V +++A
Sbjct: 363 DDGMLKQGEAQLKRIEAMIGSMTVQERENPDLLASQPSRRRRIAKGSGHQPAEVDKMLAD 422
Query: 502 LFQMRVRMKNL 512
+MR M+ +
Sbjct: 423 FQKMRGFMQQM 433
>gi|124026411|ref|YP_001015526.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
gi|123961479|gb|ABM76262.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
Length = 487
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/429 (54%), Positives = 313/429 (72%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT+ E A KGE +++EN+ E ++ +RRALL+ADVSL VV+ F+ V +AV
Sbjct: 1 MFDALTNQFEDAVKAFKGEAKISEENVDEALKQVRRALLDADVSLSVVKEFIDEVRVKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RG+ P Q+ +++V +ELV +MGGE L ++ +PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GTEVVRGIDPGQKFIQVVHEELVNVMGGENDPLANSEEQPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK++ K +LVA D YRPAAIDQLV LG+Q+ V V+ + +KP +IAK+GLE+AKK
Sbjct: 121 GLLLKEKNKKPLLVAADTYRPAAIDQLVTLGKQIDVEVFNLSSNLKPEEIAKKGLEKAKK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V+VDTAGRLQID MM E+ +K + P EVLLVVD+M GQEAA + +F+ ++G
Sbjct: 181 EGFDTVLVDTAGRLQIDTDMMGEMVRIKEAVQPDEVLLVVDSMIGQEAADITRSFHEKVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKISGKPIKFIGTGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ DAE MQKK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVEIADAEIMQKKLQEATFDFSDFVKQMRMIKRMGSLGGLLKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ E LK +EAMI +M+ EER KPELLA P RR+RVA SG V +++A
Sbjct: 361 GMIKSGEDQLKKIEAMIGSMSVEERNKPELLAAQPSRRRRVASGSGHKPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR MK +
Sbjct: 421 RMRGLMKQM 429
>gi|33866152|ref|NP_897711.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
gi|33639127|emb|CAE08133.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
Length = 487
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/429 (52%), Positives = 319/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A LKG++ ++ N+ ++D+RRALLEADVSLPVV+ FV V E+AV
Sbjct: 1 MFDELSARFEDAVKGLKGQDKISDTNVEVALKDVRRALLEADVSLPVVKDFVADVREKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV++MGG+ + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQKFIQVVHEQLVEVMGGDNAPLAKAAEAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+GV V++ GTE KP +IA GL +AK+
Sbjct: 121 GLHLKDQGRRALMVGADVYRPAAIEQLKTLGGQIGVEVFSLGTEAKPEEIAAAGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDTEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A FDF+DF++Q R + RMGS+ ++ MIPGM K+
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEATFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKLDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MTP+ERE P+LLA P RR+R+A SG V +++A
Sbjct: 361 GILKQGEQQLKRIEAMIGSMTPKERENPDLLAGQPSRRRRIAAGSGHQPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|72382692|ref|YP_292047.1| signal recognition particle protein [Prochlorococcus marinus str.
NATL2A]
gi|72002542|gb|AAZ58344.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. NATL2A]
Length = 487
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/429 (54%), Positives = 313/429 (72%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +LT+ E A KGE +++EN+ E ++ +RRALL+ADVSL VV+ F+ V +AV
Sbjct: 1 MFEELTNQFEDAVKAFKGEAKISEENVDEALKQVRRALLDADVSLSVVKEFIDEVRVKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RG+ P Q+ +++V +ELV +MGGE L ++ +PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GTEVVRGIDPGQKFIQVVHEELVNVMGGENDPLANSEEQPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK++ K +LVA D YRPAAIDQLV LG+Q+ V V+ + +KP +IAK+GLE+AK
Sbjct: 121 GLLLKEKNKKPLLVAADTYRPAAIDQLVTLGKQIDVEVFNLSSNLKPEEIAKKGLEKAKN 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V+VDTAGRLQID MM E+ +K + P EVLLVVD+M GQEAA + +F+ ++G
Sbjct: 181 EGFDTVLVDTAGRLQIDTDMMGEMVRIKEAVQPDEVLLVVDSMIGQEAADITRSFHEKVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PFYP+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKISGKPIKFIGTGEKVEALQPFYPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ DAE MQKK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVEIADAEIMQKKLQEATFDFSDFVKQMRMIKRMGSLGGLLKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ E LK +EAMI +M+ EER KPELLA P RR+RVA SG V +++A
Sbjct: 361 GMIKSGEDQLKKIEAMIGSMSVEERNKPELLAAQPSRRRRVASGSGHKPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR MK +
Sbjct: 421 RMRGLMKQM 429
>gi|78212426|ref|YP_381205.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9605]
gi|78196885|gb|ABB34650.1| signal recognition particle protein [Synechococcus sp. CC9605]
Length = 492
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/429 (52%), Positives = 317/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++++++ N+ ++D+RRALLEADVSLPVV+ FV V ++AV
Sbjct: 1 MFDELSARFEDAVKGLRGQDSISETNVDGALKDVRRALLEADVSLPVVKEFVADVRDKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV++MGG+ + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQKFIQVVHEQLVEVMGGDNAPLAKAADAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+ V V++ G E KP IA GL +AK+
Sbjct: 121 GLHLKDQGRRALMVGADVYRPAAIEQLKTLGAQIDVEVFSLGAEAKPEDIAAAGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDTEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEATFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT +ERE P+LLA P RR+R+A SG V +++A
Sbjct: 361 GMLKQGEQQLKRIEAMIGSMTQQERENPDLLASQPSRRRRIASGSGHQAADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|124023656|ref|YP_001017963.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
gi|123963942|gb|ABM78698.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
Length = 494
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/429 (52%), Positives = 321/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G+ ++ N+ + ++ +RRALL ADVSL VVR FV V ++AV
Sbjct: 1 MFEELSARFEDAVKGLRGQAKISDTNVEDALKQVRRALLGADVSLEVVREFVDEVRQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ V++V +LV++MGG+ + + AK PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVTPDQKFVQVVHQQLVEVMGGDNAPMAEAKDSPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++VA DVYRPAAIDQL LGEQ+GV V++ G +VKP +IA GL +A++
Sbjct: 121 GLHLKDQGQRPLMVAADVYRPAAIDQLRTLGEQIGVDVFSLGDDVKPEEIAAAGLAKARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDTEMMEEMVRIRSAVEPDEVLLVVDSMIGQEAAELTRAFHDKVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG++LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGSVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A+FDF+DFL+QTR + RMGS+ +I M+PGM K+
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEASFDFSDFLQQTRLIKRMGSLGGLIKMMPGMNKLDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT +ER++PELLA P RR+R+A SG + V +++A
Sbjct: 361 GMLKQGEQQLKRIEAMIGSMTADERKQPELLASQPSRRRRIAGGSGHSPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|260435394|ref|ZP_05789364.1| signal recognition particle protein [Synechococcus sp. WH 8109]
gi|260413268|gb|EEX06564.1| signal recognition particle protein [Synechococcus sp. WH 8109]
Length = 486
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/429 (51%), Positives = 316/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ + A L+G+++++ N+ ++D+RRALLEADVSLPVV+ FV V ++AV
Sbjct: 1 MFDELSARFDDAVKGLRGQDSISDTNVDGALKDVRRALLEADVSLPVVKEFVAEVRDKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV++MGG+ + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQKFIQVVHEQLVEVMGGDNAPLAKAAEAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+ V V++ G E KP IA GL +AK+
Sbjct: 121 GLHLKDQGRRALMVGADVYRPAAIEQLKTLGAQIDVEVFSLGAEAKPEDIAAAGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDTEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEATFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT +ERE P+LLA P RR+R+A SG V +++A
Sbjct: 361 GMLKQGEQQLKRIEAMIGSMTQQERENPDLLASQPSRRRRIASGSGHQAADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|33240809|ref|NP_875751.1| signal recognition particle protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238338|gb|AAQ00404.1| Signal recognition particle GTPase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 485
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/429 (53%), Positives = 319/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+GE ++++N+ ++ +RRALLEADVSL VV++FVQ V ++A+
Sbjct: 1 MFDELSARFEDAVKGLRGENKISEDNVDIALKQVRRALLEADVSLSVVKQFVQEVRDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V ELV++MGG S L + +P+VIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVNPGQKFIEVVHQELVEVMGGANSPLADSTKKPSVILMAGLQGAGKTTAAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YLK +G ++VA DVYRPAAIDQL LG+Q+ V V++ G E KP IA GL++A++
Sbjct: 121 GLYLKDKGLKPLMVAADVYRPAAIDQLNTLGKQINVEVFSLGKESKPEDIAASGLKKAQE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D +IVDTAGRLQID+ MM+E+ ++ ++P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EDFDTLIVDTAGRLQIDEEMMNEMVRIRSAVDPDEVLLVVDSMIGQEAADLTRAFHEKVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMAGRILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMAGRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ DAE+MQ+K A FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVEIADAEQMQRKFQEATFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ E LK +EAMI +MT E+ +PELLA P RRKRVA SG T +V +++A
Sbjct: 361 GMLKSGEDQLKRIEAMIGSMTNAEQTQPELLAAQPSRRKRVAFGSGHTPVEVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR MK +
Sbjct: 421 KMRGLMKQM 429
>gi|113955128|ref|YP_729980.1| signal recognition particle protein [Synechococcus sp. CC9311]
gi|113882479|gb|ABI47437.1| signal recognition particle protein [Synechococcus sp. CC9311]
Length = 493
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/429 (52%), Positives = 314/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++T++ N+ ++++RRALLEADVSLPVV+ FV V E+AV
Sbjct: 1 MFDELSARFEDAVKGLRGQDTISDTNVEGALKEVRRALLEADVSLPVVKDFVSEVREKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV +MGG + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVTPDQKFIQVVHEQLVDVMGGGNAPLAQADQAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+GV V++ G E KP IA GL +AK+
Sbjct: 121 GLHLKDQGRKALMVGADVYRPAAIEQLKTLGGQIGVDVFSLGIEAKPEDIAAAGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGYDTLLVDTAGRLQIDSEMMEEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHDQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT ER +PELLA P RR+R+A G V +++A
Sbjct: 361 GMLKQGEQQLKKIEAMIGSMTAAERTQPELLAAQPSRRRRIASGCGYQAADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|87301099|ref|ZP_01083940.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
gi|87284067|gb|EAQ76020.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
Length = 492
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/429 (52%), Positives = 313/429 (72%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+ E A LKG++ +T+ N+ ++ +RRALLEADVSL VV+ F++ V QAV
Sbjct: 1 MFDELSQRFEDAVKSLKGQDRITESNVEGALKQVRRALLEADVSLEVVKGFIEEVRTQAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQQ +++V LV++MGGE + L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQQFIQLVHQALVEVMGGENAPLAVADQAPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK+QGK ++VA DVYRPAAIDQL LG+Q+GV V++ G + +P IA G+ AK+
Sbjct: 121 GLHLKEQGKRALMVAADVYRPAAIDQLQTLGQQIGVEVFSLGADARPEDIAAAGIARAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V+VDTAGRLQID AMM+E+ +++ P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTVLVDTAGRLQIDTAMMEEMVRIRQAAAPDEVLLVVDSMIGQEAAELTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGA+LTKLDGDSRGGAALS+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 LTGAVLTKLDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKA + ++ D +MQ+K+ A+FDF+DFL+Q R + RMGS+ ++ +IPGM KI
Sbjct: 301 TLVEKASKEVELADVAKMQQKLQEASFDFSDFLQQMRMIKRMGSLGGLMKLIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ L +EAMI +MT ERE+P+LLA P RR+R+A SG + V +++A
Sbjct: 361 GMLKQGEEQLGKIEAMIGSMTAAEREQPQLLAAQPSRRRRIAAGSGHSPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|159478459|ref|XP_001697320.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
gi|158274478|gb|EDP00260.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
Length = 549
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/500 (49%), Positives = 337/500 (67%), Gaps = 17/500 (3%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L++R+ MF L+ +E A + TLT EN+ EP++++RRALLEADVSLPVVRRF++
Sbjct: 60 LVIRSAMFDSLSRSIEKAQRLIGKSGTLTAENMKEPLKEVRRALLEADVSLPVVRRFIKK 119
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
V E+A+G + G + +V L +G + + G +GVGKT
Sbjct: 120 VEERALGTKVREGRAMGTKWKSVVNCPLQDGLGNRGVGRARTEVGHRAACVHGARGVGKT 179
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
T + KLA YLKK KSC+LVA DVYRPAAIDQLV LG + VPV+ GT+V P +IAK+G
Sbjct: 180 TAAGKLALYLKKAKKSCLLVATDVYRPAAIDQLVKLGAAIDVPVFEMGTDVSPVEIAKKG 239
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
+EEA++ VD VI+DTAGRLQ+D+ MM EL+DVK + P++ LLVVDAMTGQEAA LV +
Sbjct: 240 VEEARRLGVDAVIIDTAGRLQVDEGMMAELRDVKSAVRPSDTLLVVDAMTGQEAANLVRS 299
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FN + I+GAILTK+DGDSRGGAALSV+EVSGKPIK VG GE+ME LEPFYP+RMA RIL
Sbjct: 300 FNEAVDISGAILTKMDGDSRGGAALSVREVSGKPIKFVGVGEKMEALEPFYPERMASRIL 359
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVL+ EKA+ +++EDA++ +++M FDFNDFL Q + + MG + +++ M+PG
Sbjct: 360 GMGDVLTLYEKAEAAIKEEDAQKTMERLMEEKFDFNDFLNQWKAMNNMGGL-QMLKMMPG 418
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
KI+ Q+ EAEK + EA+I AM EER PE+L ++ RR+RVAQDSGK+E +V++
Sbjct: 419 FNKISEKQLYEAEKQFGVYEAIIGAMDEEERSNPEVLIKNLARRRRVAQDSGKSEAEVTK 478
Query: 498 LVAQLFQMRVR---MKNLMGVMEGGSLPALSN--LEDALKSE-QKAPPGTARRKRRSESR 551
L+A M+ + M L+ + + G+ P +N L++ + S +K PG RRK+ E
Sbjct: 479 LMAAYTSMKAQVGGMSKLLKLQKAGADPQKANSLLQELVASAGKKVAPGKVRRKKEKE-- 536
Query: 552 RQFVDPASTRPSPRGFGGGS 571
P S RGFG S
Sbjct: 537 -----PLS---KARGFGSSS 548
>gi|194476608|ref|YP_002048787.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
gi|171191615|gb|ACB42577.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
Length = 481
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/429 (51%), Positives = 312/429 (72%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A LKG +T+ N+ ++ +RRAL+EADVSL VV+ F++ V +++
Sbjct: 1 MFDELSARFEEAVKSLKGLSAITENNVENALKQVRRALIEADVSLVVVKEFMEEVRSKSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++RG++PDQ+ +++V ++L+++MG + L TV+L+AGLQG GKTT +AKL
Sbjct: 61 GIEVVRGIKPDQKFIQVVYEQLIEIMGANNTPLHKQSHTVTVVLMAGLQGAGKTTAAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YLK QG+ ++VA DVYRPAAIDQL +LG+Q+ V V+T E P IA GL++A +
Sbjct: 121 ALYLKNQGEKVLMVAADVYRPAAIDQLFVLGKQIDVEVFTLNPESIPEDIAAAGLQKAIR 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D +IVDTAGRLQID AMM E+ ++ +NP E+LLVVD+M GQEAA L F+ +IG
Sbjct: 181 EGFDYLIVDTAGRLQIDTAMMQEMVRIRSAVNPNEILLVVDSMIGQEAAELTRAFHEQIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGD+RGGAALS+++VSG PIK +G GE++E L+PF+P+RMA RILGMGD++
Sbjct: 241 ITGAVLTKLDGDARGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDIV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQE ++ D E+MQ+K+ A+FDF+DFL+Q R V RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQEEVELADVEKMQRKLQEASFDFSDFLQQMRLVKRMGSLGGLMKMIPGMNKIDS 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+RE E LK +E+MI +MTP EREKPELLA P RR R+A+ SG V +++
Sbjct: 361 TMLREGEAQLKRIESMIGSMTPTEREKPELLASQPSRRGRIAKGSGHKIADVDKMLVDFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|116073373|ref|ZP_01470635.1| signal recognition particle protein [Synechococcus sp. RS9916]
gi|116068678|gb|EAU74430.1| signal recognition particle protein [Synechococcus sp. RS9916]
Length = 499
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/429 (52%), Positives = 316/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A LKG++ +++ N+ ++++RRALLEADVSLPVV+ FV V E+AV
Sbjct: 1 MFDELSARFEDAVKGLKGQDKISETNVDGALKEVRRALLEADVSLPVVKDFVAEVREKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV++MGG + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQKFIQVVHEQLVEVMGGGNAPLAKADQAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LGEQ+ V V++ G E KP IA GL +AK+
Sbjct: 121 GLHLKDQGRRALMVGADVYRPAAIEQLRTLGEQIDVEVFSLGAEAKPEDIAAAGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID +MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDTSMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFMGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM K+
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKLDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT ER +PELLA P RR+R+A G V +++A
Sbjct: 361 GMLKQGEQQLKKIEAMIGSMTAAERTQPELLAAQPSRRRRIAAGCGYQPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|427702484|ref|YP_007045706.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
gi|427345652|gb|AFY28365.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
Length = 496
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/429 (52%), Positives = 309/429 (72%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+ E A L+G+ +++ N+ +RD+RRALLEADVSLPVV+ F++ V +AV
Sbjct: 1 MFDELSQRFEDAVKGLRGQAAISETNVDGALRDVRRALLEADVSLPVVKEFIEEVRRKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQQ +++V +LV+ MGG + L A PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQQFIQLVHAQLVETMGGANAPLARAAEGPTVILMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK+QG+ +LVA DVYRPAAIDQL LG Q+GV V++ G+E P IA G+ ++
Sbjct: 121 GLHLKEQGRRPLLVAADVYRPAAIDQLQTLGRQIGVEVFSLGSEASPEAIAAAGVARGRE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V+VDTAGRLQID AMM E+ ++ P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTVLVDTAGRLQIDTAMMGEMVRIREAAAPDEVLLVVDSMIGQEAADLTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKA + ++ D E+MQ+K+ A+FDF+DF++Q R + RMGS+ ++ +IPGM KI
Sbjct: 301 TLVEKATKEVELADVEKMQRKLQEASFDFSDFVQQMRLIKRMGSLGGLMKLIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+R+ E LK +EAMI +MT ER +PELLA P RR+R+A SG T V +++A
Sbjct: 361 GMLRQGESQLKRIEAMIGSMTEAERRQPELLAAQPSRRRRIAAGSGHTPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|352096234|ref|ZP_08957114.1| signal recognition particle protein [Synechococcus sp. WH 8016]
gi|351676928|gb|EHA60079.1| signal recognition particle protein [Synechococcus sp. WH 8016]
Length = 496
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/429 (51%), Positives = 315/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++++++ N+ ++++RRALL+ADVSLPVV+ FV V E+AV
Sbjct: 1 MFDELSARFEDAVKGLRGQDSISETNVEGALKEVRRALLDADVSLPVVKDFVSEVREKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV +MGG + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVTPDQKFIQVVHEQLVDVMGGGNAPLAKADQAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+GV V++ G E KP IA GL +AK+
Sbjct: 121 GLHLKDQGRKALMVGADVYRPAAIEQLKTLGGQIGVDVFSLGIEAKPEDIAAAGLAKAKQ 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGYDTLLVDTAGRLQIDSEMMEEMVRIRGAVQPDEVLLVVDSMIGQEAAELTRAFHDQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A+FDF+DF++Q R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEASFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT ER +PELLA P RR+R+A G V +++A
Sbjct: 361 GMLKQGEQQLKKIEAMIGSMTEAERTQPELLAAQPSRRRRIASGCGYQAADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGVMQQM 429
>gi|126696809|ref|YP_001091695.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
gi|126543852|gb|ABO18094.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
Length = 492
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/430 (52%), Positives = 316/430 (73%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+S E A L+GE +++ NI + +++++RALL+ADVSL VV+ F+ V ++A+
Sbjct: 1 MFDELSSRFEDAVKGLRGEAKISENNINDALKEVKRALLDADVSLSVVKEFITDVKDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V EL+K+MG E S L ++ PTVIL+AGLQG GKTT + KL
Sbjct: 61 GEEVVRGVNPGQKFIEVVNKELIKIMGNENSPLNENENSPTVILMAGLQGAGKTTATGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAK 262
YLK++ K +LVA D+YRPAA++QL LG Q + V++A + KP +IAK+ L A
Sbjct: 121 GLYLKEKDKKVLLVAADIYRPAAVEQLKTLGSQYELEVFSAKEKNSKPEEIAKEALNFAN 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ + + +I+DTAGRLQID +MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++
Sbjct: 181 ENDFNSIIIDTAGRLQIDDSMMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GITGAILTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDV
Sbjct: 241 GITGAILTKLDGDSRGGAALSIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ VEKAQ+ ++ DAE MQKK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI
Sbjct: 301 LTLVEKAQKEVELADAEAMQKKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+++ E LK +E+MI +MT EE++KPE+LA P RR+R+AQ SG + V +++A
Sbjct: 361 DGMIKDGEDQLKKIESMISSMTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADF 420
Query: 503 FQMRVRMKNL 512
+MR MK +
Sbjct: 421 QRMRGFMKQM 430
>gi|78779766|ref|YP_397878.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9312]
gi|78713265|gb|ABB50442.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. MIT 9312]
Length = 489
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/430 (51%), Positives = 313/430 (72%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+S E A L+GE +++ NI + +++++RALL+ADVSL VV+ F+ V ++A+
Sbjct: 1 MFDELSSRFEDAVKGLRGEAKISENNINDALKEVKRALLDADVSLSVVKEFISDVKDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V EL+ +MG E S L +S PTVIL+AGLQG GKTT + KL
Sbjct: 61 GEEVVRGVNPGQKFIEVVNKELINIMGNENSPLNENQSSPTVILMAGLQGAGKTTATGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAK 262
YLK++ K +LVA D+YRPAA++QL LG Q + V++A + KP +I K L A
Sbjct: 121 GLYLKEKDKKVLLVAADIYRPAAVEQLKTLGSQYDLEVFSAKEKNSKPEEITKDALNYAN 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ N + +I+DTAGRLQID +MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++
Sbjct: 181 ENNFNSIIIDTAGRLQIDDSMMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GI+GAILTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDV
Sbjct: 241 GISGAILTKLDGDSRGGAALSIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ VEKAQ+ ++ DAE MQKK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI
Sbjct: 301 LTLVEKAQKEVELADAEVMQKKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+++ E LK +E+MI +MT EE++KPE+LA P RR+R+AQ SG + V +++A
Sbjct: 361 DGMIKDGEYQLKKIESMISSMTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADF 420
Query: 503 FQMRVRMKNL 512
+MR MK +
Sbjct: 421 QRMRGFMKQM 430
>gi|318042117|ref|ZP_07974073.1| signal recognition particle protein [Synechococcus sp. CB0101]
Length = 487
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/431 (51%), Positives = 314/431 (72%), Gaps = 2/431 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+ E A L+G+ ++++ N+ ++++RRALLEADVSLPVV+ FV V ++A+
Sbjct: 1 MFDELSQRFEDAVKNLRGQGSISESNVDGALKEVRRALLEADVSLPVVKDFVDEVRKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA--KSRPTVILLAGLQGVGKTTVSA 201
G ++RG+ PDQ+ +++V ++LV MGGE + L P+V+L+AGLQG GKTT +A
Sbjct: 61 GAEVVRGISPDQKFIQVVHEQLVDTMGGENAPLAAGGKPGEPSVVLMAGLQGAGKTTATA 120
Query: 202 KLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
KL +LK+QG+ +LV DVYRPAAIDQL LG Q+GV V++ GT+ KP IA G+E+A
Sbjct: 121 KLGLHLKEQGRKALLVGADVYRPAAIDQLKTLGGQIGVEVFSLGTDAKPEAIAAAGIEKA 180
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
K + D V+VDTAGRLQID++MM+E+ ++ +P EVLLVVD+M GQEAA L F+ +
Sbjct: 181 KAEGFDTVLVDTAGRLQIDESMMEEMVRIREACSPDEVLLVVDSMIGQEAAELTRAFHDQ 240
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+GITGA+LTKLDGDSRGGAALS+++VSG PIK +G GE++E L+PF+P+RMA RILGMGD
Sbjct: 241 VGITGAVLTKLDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VL+ VEKAQ+ ++ D +MQ+K+ A FDF+DF++Q R + RMGS+ ++ +IPGM KI
Sbjct: 301 VLTLVEKAQKEVELADVAKMQQKLQEATFDFSDFVQQMRLIKRMGSLGGLMKLIPGMNKI 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+++ E+ LK +EAMI +MT ER P+LLA +P RR+R+A SG T V +++
Sbjct: 361 DDGMLKQGEEQLKKIEAMISSMTEAERRDPDLLAANPSRRRRIASGSGHTSADVDKVLQN 420
Query: 502 LFQMRVRMKNL 512
QMR M+ +
Sbjct: 421 FQQMRGFMQQM 431
>gi|123969017|ref|YP_001009875.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
gi|123199127|gb|ABM70768.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
Length = 498
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/430 (51%), Positives = 314/430 (73%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+S E A L+GE +++ NI + +++++RALL+ADVSL VV+ F+ V ++A+
Sbjct: 1 MFDELSSRFEDAVKGLRGEAKISENNINDALKEVKRALLDADVSLSVVKEFISDVKDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V EL+ +MG E S L + PTVIL+AGLQG GKTT + KL
Sbjct: 61 GEEVVRGVNPGQKFIEVVNKELINIMGNENSPLNENEKSPTVILMAGLQGAGKTTATGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAK 262
YLK++ K +LVA D+YRPAA++QL LG Q + V++A + KP +IAK+ L A
Sbjct: 121 GLYLKEKDKKVLLVAADIYRPAAVEQLKTLGSQYELEVFSAKEKNSKPEEIAKEALNFAN 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ + + +I+DTAGRLQID +MM E+ +K V NP E+LLVVD+M GQEAA L +F+ ++
Sbjct: 181 ENDFNSIIIDTAGRLQIDDSMMSEMVRIKEVSNPDEILLVVDSMIGQEAADLTKSFHEKV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GITGAILTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDV
Sbjct: 241 GITGAILTKLDGDSRGGAALSIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ VEKAQ+ ++ DAE MQKK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI
Sbjct: 301 LTLVEKAQKEVELADAEAMQKKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+++ E LK +E+MI +MT EE++KPE+LA P RR+R+AQ SG + V +++A
Sbjct: 361 DGMIKDGEDQLKKIESMISSMTLEEKQKPEVLAAHPSRRQRIAQGSGYEAKDVDKVLADF 420
Query: 503 FQMRVRMKNL 512
+MR MK +
Sbjct: 421 QRMRGFMKQM 430
>gi|123966680|ref|YP_001011761.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
gi|123201046|gb|ABM72654.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
Length = 492
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/430 (52%), Positives = 314/430 (73%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+S E A L+GE +++ NI + ++ +++ALL+ADVSL VV+ FV V ++A+
Sbjct: 1 MFDELSSRFEDAVKGLRGEAKISENNIDDALKQVKKALLDADVSLSVVKEFVSDVKDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V EL+ +MG E S L ++ PTVIL+AGLQG GKTT + KL
Sbjct: 61 GEDVVRGVNPGQKFIEVVNKELINVMGNENSPLFEKETPPTVILMAGLQGAGKTTATGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAG-TEVKPSQIAKQGLEEAK 262
YLK++ K +LVA D+YRPAA++QL +G Q + V++A + KP +IAK L A
Sbjct: 121 GLYLKEKEKKVLLVAADIYRPAAVEQLKTIGNQYDLEVFSAKEKDSKPEEIAKDALIYAN 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ NVD +IVDTAGRLQID+ MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++
Sbjct: 181 ENNVDTLIVDTAGRLQIDELMMSEMVRIKEVTNPDEVLLVVDSMIGQEAADLTKSFHEKV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GI+GAILTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDV
Sbjct: 241 GISGAILTKLDGDSRGGAALSIRKISGKPIKFIGTGEKIEALQPFHPERMASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ VEKAQ+ ++ DAE MQKK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI
Sbjct: 301 LTLVEKAQKEVELADAEVMQKKLQEATFDFNDFVKQMRLMKRMGSLGGLIKLIPGMNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ E+ LK +E+MI +MT EE++KPE+LA P RR+R+AQ SG + V +++A
Sbjct: 361 DGMIKNGEEQLKKIESMISSMTLEEKQKPEVLAAQPSRRQRIAQGSGYQAKDVDKVLADF 420
Query: 503 FQMRVRMKNL 512
+MR MK +
Sbjct: 421 QRMRGFMKQM 430
>gi|157413847|ref|YP_001484713.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9215]
gi|157388422|gb|ABV51127.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9215]
Length = 492
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/430 (51%), Positives = 312/430 (72%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+S E A L+GE +++ NI + + ++RALL+ADVSL VV+ F+ V E+A+
Sbjct: 1 MFDELSSRFEDAVKGLRGEAKISENNINDALNQVKRALLDADVSLSVVKDFISEVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V EL+ +MG E S L K+ PTVIL+AGLQG GKTT + KL
Sbjct: 61 GEEVVRGVNPGQKFIEVVNKELINIMGNENSPLNENKNSPTVILMAGLQGAGKTTATGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAK 262
YLK++ K +LVA D+YRPAA++QL LG Q + V++A + KP IAK L A+
Sbjct: 121 GLYLKEKDKKVLLVAADIYRPAAVEQLKTLGSQYDLEVFSAKEKNCKPEVIAKDALNFAR 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ + + +I+DTAGRLQID +MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++
Sbjct: 181 ENDFNSIIIDTAGRLQIDDSMMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GI+GAILTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDV
Sbjct: 241 GISGAILTKLDGDSRGGAALSIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ VEKAQ+ ++ DAE MQ+K+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI
Sbjct: 301 LTLVEKAQKEVELADAEAMQRKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+++ E LK +E+MI +MT EE++KPE+LA P RR+R+AQ SG + V +++A
Sbjct: 361 DGMIKDGEDQLKKIESMISSMTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADF 420
Query: 503 FQMRVRMKNL 512
+MR MK +
Sbjct: 421 QRMRGFMKQM 430
>gi|254432051|ref|ZP_05045754.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
gi|197626504|gb|EDY39063.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
Length = 494
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/431 (51%), Positives = 314/431 (72%), Gaps = 2/431 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+ E A L+G+ +++ N+ ++D+RRALLEADVSLPVV+ FV V +AV
Sbjct: 1 MFDELSQRFEDAVKNLRGQGAISESNVEGALKDVRRALLEADVSLPVVKDFVDEVRRKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA--KSRPTVILLAGLQGVGKTTVSA 201
G ++RG+ PDQ+ +++V ++LV MGGE + L P+V+L+AGLQG GKTT +A
Sbjct: 61 GAEVVRGISPDQKFIQVVHEQLVDTMGGENAPLAAGGKPGEPSVVLMAGLQGAGKTTATA 120
Query: 202 KLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
KL +LK+QG+ +LV DVYRPAAI+QL LG Q+GV V++ GTE +P IA G+E+A
Sbjct: 121 KLGLHLKEQGRRALLVGADVYRPAAIEQLRTLGGQIGVEVFSLGTEARPEDIAAAGVEKA 180
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
+++ D V+VDTAGRLQID +MM+E+ ++ + P EVLLVVD+M GQEAA L F+ +
Sbjct: 181 REEGFDTVLVDTAGRLQIDTSMMEEMVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHEQ 240
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+GITGA+LTKLDGDSRGGAALS+++VSG PIK +G GE++E L+PF+P+RMA RILGMGD
Sbjct: 241 VGITGAVLTKLDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VL+ VEKAQ+ ++ D MQ+K+ A+FDF+DF++Q R + RMGS+ ++ MIPGM KI
Sbjct: 301 VLTLVEKAQKEVELADVARMQQKLQEASFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKI 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+++ E+ L +E+MI +MT ERE P+LLA P RR+R+A+ SG T +V +++A
Sbjct: 361 DDGMLKQGEQQLGKIESMISSMTAAERENPDLLALMPSRRRRIAKGSGHTPAEVDKVLAD 420
Query: 502 LFQMRVRMKNL 512
+MR M+ +
Sbjct: 421 FQRMRGFMQQM 431
>gi|148240067|ref|YP_001225454.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
gi|147848606|emb|CAK24157.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
Length = 523
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/429 (52%), Positives = 318/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++ ++ N+ ++D+RRALLEADVSLPVV+ FV V E+AV
Sbjct: 30 MFDELSARFEDAVKGLRGQDKISDTNVEGALKDVRRALLEADVSLPVVKAFVADVREKAV 89
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV++MGG + L A++ PTV+L+AGLQG GKTT +AKL
Sbjct: 90 GSDVVRGVSPDQKFIQVVHEQLVEVMGGGNAPLAQAETAPTVVLMAGLQGAGKTTATAKL 149
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+GV V++ G + KP IA GL +AK+
Sbjct: 150 GLHLKDQGRRALMVGADVYRPAAIEQLKTLGGQIGVEVFSLGADAKPEAIAAAGLAKAKE 209
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 210 EGFDTLLVDTAGRLQIDSEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVG 269
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 270 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 329
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A FDF+DF++Q R + RMGS+ ++ MIPGM KI
Sbjct: 330 TLVEKAQKEVELADVEKMQKKLQEATFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDD 389
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT +ERE P+LLA P RR+R+A+ SG V +++A
Sbjct: 390 GMLKQGEQQLKKIEAMIGSMTQQERENPDLLAGQPSRRRRIARGSGHQPADVDKVLADFQ 449
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 450 KMRGFMQQM 458
>gi|317969124|ref|ZP_07970514.1| signal recognition particle protein [Synechococcus sp. CB0205]
Length = 488
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/431 (51%), Positives = 314/431 (72%), Gaps = 2/431 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+ E A L+G+ + + NI ++D+RRALLEADVSLPVV+ FV+ V ++A+
Sbjct: 1 MFDELSQRFEDAVKNLRGQGAINEGNIDGALKDVRRALLEADVSLPVVKDFVEEVRKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA--KSRPTVILLAGLQGVGKTTVSA 201
G ++RG+ PDQ+ +++V ++LV+ MGGE + L A + P V+L+AGLQG GKTT +A
Sbjct: 61 GEEVVRGISPDQKFIQVVHEQLVETMGGENAPLAPAGKEGAPAVVLMAGLQGAGKTTATA 120
Query: 202 KLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
KL +LK++G+ +LV DVYRPAAI+QL LG Q+GV V++ GT+ KP IA G+E+A
Sbjct: 121 KLGLHLKEKGRRALLVGADVYRPAAIEQLKTLGGQIGVEVFSLGTDAKPEAIAAAGIEKA 180
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
K + D V+VDTAGRLQID +MM+E+ ++ + P EVLLVVD+M GQEAA L F+ +
Sbjct: 181 KAEGFDTVLVDTAGRLQIDTSMMEEMVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHDQ 240
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+GITGA+LTKLDGDSRGGAALS+++VSG PIK +G GE++E L+PF+P+RMA RILGMGD
Sbjct: 241 VGITGAVLTKLDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VL+ VEKAQ+ ++ D +MQ+K+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI
Sbjct: 301 VLTLVEKAQKEVELADVAKMQQKLQEATFDFSDFIKQMRLIKRMGSLGGLMKMIPGMNKI 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+++ E+ LK +EAM+ +MT ER P+LLA +P RR+R+A SG T V +++
Sbjct: 361 DDGMLKQGEEQLKKIEAMVGSMTEAERCDPDLLAANPSRRRRIASGSGHTPADVDKVLQN 420
Query: 502 LFQMRVRMKNL 512
QMR M+ +
Sbjct: 421 FQQMRGFMQQM 431
>gi|33861842|ref|NP_893403.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33640210|emb|CAE19745.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 498
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/430 (51%), Positives = 314/430 (73%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+S E A L+GE +++ NI + ++ +++ALL+ADVSL VV+ FV V ++A+
Sbjct: 1 MFDELSSRFEDAVKGLRGEAKISENNIDDALKQVKKALLDADVSLSVVKEFVSDVKDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V EL+ +MG E S L ++ PTVIL+AGLQG GKTT + KL
Sbjct: 61 GEEVVRGVNPGQKFIEVVNKELINIMGNENSPLNKKETTPTVILMAGLQGAGKTTATGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAK 262
YLK++ + +LVA D+YRPAA++QL +G Q + V++A + KP +IA+ L A
Sbjct: 121 GLYLKEKEEKVLLVAADIYRPAAVEQLKTIGNQYDLEVFSAKEKNSKPEEIARDALSYAN 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
N+D +IVDTAGRLQID++MM E+ +K+V P EVLLVVD+M GQEAA L +F+ ++
Sbjct: 181 ANNIDTLIVDTAGRLQIDESMMGEMVRIKQVTKPDEVLLVVDSMIGQEAADLTKSFHEKV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GITGAILTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDV
Sbjct: 241 GITGAILTKLDGDSRGGAALSIRKISGKPIKFIGTGEKIEALQPFHPERMASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ VEKAQ+ ++ DAE MQKK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI
Sbjct: 301 LTLVEKAQKEVELADAEVMQKKLQEATFDFNDFVKQMRLMKRMGSLGGLIKLIPGMNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ E+ LK +E+MI +MT EE++KPE+LA P RR+R+AQ SG + V +++A
Sbjct: 361 DGMIKNGEEQLKKIESMISSMTLEEKQKPEVLAAQPSRRQRIAQGSGYQAKDVDKVLADF 420
Query: 503 FQMRVRMKNL 512
+MR MK +
Sbjct: 421 QRMRGFMKQM 430
>gi|254525556|ref|ZP_05137608.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
gi|221536980|gb|EEE39433.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
Length = 486
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/430 (51%), Positives = 311/430 (72%), Gaps = 1/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+S E A L+GE +++ NI + + ++RALL+ADVSL VV+ F+ V E+A+
Sbjct: 1 MFDELSSRFEDAVKGLRGEAKISENNINDALNQVKRALLDADVSLSVVKDFISEVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV P Q+ +++V EL+ +MG E S L ++ PTVIL+AGLQG GKTT + KL
Sbjct: 61 GEEVVRGVNPGQKFIEVVNKELINIMGNENSPLNENENSPTVILMAGLQGAGKTTATGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTE-VKPSQIAKQGLEEAK 262
YLK + K +LVA D+YRPAA++QL LG Q + V++A + KP IAK L A+
Sbjct: 121 GLYLKAKDKKVLLVAADIYRPAAVEQLKTLGSQYDLEVFSAKEKNCKPEVIAKDALNFAR 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ + + +I+DTAGRLQID +MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++
Sbjct: 181 ENDFNSIIIDTAGRLQIDDSMMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GI+GAILTKLDGDSRGGAALS++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDV
Sbjct: 241 GISGAILTKLDGDSRGGAALSIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ VEKAQ+ ++ DAE MQ+K+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI
Sbjct: 301 LTLVEKAQKEVELADAEAMQRKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKID 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+++ E LK +E+MI +MT EE++KPE+LA P RR+R+AQ SG + V +++A
Sbjct: 361 DGMIKDGEDQLKKIESMISSMTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADF 420
Query: 503 FQMRVRMKNL 512
+MR MK +
Sbjct: 421 QRMRGFMKQM 430
>gi|88809131|ref|ZP_01124640.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
gi|88787073|gb|EAR18231.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
Length = 489
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/429 (52%), Positives = 317/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++ ++ N+ ++D+RRALLEADVSLPVV+ FV V E+AV
Sbjct: 1 MFDELSARFEDAVKGLRGQDKISDTNVEGALKDVRRALLEADVSLPVVKDFVADVREKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V ++LV++MGG + L A+ PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GSDVVRGVSPDQKFIQVVHEQLVEVMGGGNAPLAQAEEAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+GV V++ G + KP IA GL +AK+
Sbjct: 121 GLHLKDQGRRALMVGADVYRPAAIEQLKTLGGQIGVEVFSLGADAKPEAIAAAGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDTEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A FDF+DF++Q R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEATFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT +ERE P+LLA P RR+R+A+ SG V +++A
Sbjct: 361 GMLKQGEQQLKKIEAMIGSMTQQERENPDLLAGQPSRRRRIARGSGHQPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|13123461|gb|AAK12834.1|AF238499_1 chloroplast SRP54 precursor [Chlamydomonas reinhardtii]
Length = 549
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/493 (48%), Positives = 343/493 (69%), Gaps = 15/493 (3%)
Query: 78 LIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQA 137
L++R+ MF L+ +E A + TLT EN+ EP++++RRALLEADVSLPVVRRF++
Sbjct: 60 LVIRSAMFDSLSRSIEKAQRLIGKSGTLTAENMKEPLKEVRRALLEADVSLPVVRRFIKK 119
Query: 138 VSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKT 197
V E+A+G ++ GV PD Q +K V +EL+ LMGG ++++ +IL+AGLQGVG+
Sbjct: 120 VEERALGTKVLEGVTPDVQFIKTVSNELIDLMGGGNRGKTWSRASRKIILMAGLQGVGRH 179
Query: 198 TVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQG 257
+ KLA YL+ + +L+ DVY AA QL G + VPV+ GT+V P +IAK+G
Sbjct: 180 C-AGKLALYLRARE---LLLLHDVY--AAHRQLSA-GAAIDVPVFEDGTDVSPVRIAKKG 232
Query: 258 LEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
+EEA++ VD VI+DTAGRLQ+D+ MM EL+DVK + P++ LLVVDAMTGQEAA LV +
Sbjct: 233 VEEARRLGVDAVIIDTAGRLQVDEGMMAELRDVKSAVRPSDTLLVVDAMTGQEAANLVRS 292
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
FN + I+GAILTK+DGDSRGGAALSV+EVSGKPIK VG GE+ME LEPFYP+RMA RIL
Sbjct: 293 FNEAVDISGAILTKMDGDSRGGAALSVREVSGKPIKFVGVGEKMEALEPFYPERMASRIL 352
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
GMGDVL+ EKA+ +++EDA++ +++M FDFNDFL Q + + MG + +++ M+PG
Sbjct: 353 GMGDVLTLYEKAEAAIKEEDAQKTMERLMEEKFDFNDFLNQWKAMNNMGGL-QMLKMMPG 411
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAES-PVRRKRVAQDSGKTEQQVS 496
KI+ + EAEK + EA+I AM EER PE+L ++ +RR+RVAQDSGK+E +V+
Sbjct: 412 FNKISEKHLYEAEKQFGVYEAIIGAMDEEERSNPEVLIKNLALRRRRVAQDSGKSEAEVT 471
Query: 497 QLVAQLFQMRVR---MKNLMGVMEGGSLPALSN--LEDALKSE-QKAPPGTARRKRRSES 550
+L+A M+ + M L+ + + G+ P +N L++ + S +K PG RRK+ ++
Sbjct: 472 KLMAAYTSMKAQVGGMSKLLKLQKAGADPQKANSLLQELVASAGKKVAPGKVRRKKEKDA 531
Query: 551 RRQFVDPASTRPS 563
Q ++ RP+
Sbjct: 532 LSQGSRASAHRPN 544
>gi|116072341|ref|ZP_01469608.1| Signal recognition particle protein [Synechococcus sp. BL107]
gi|116064863|gb|EAU70622.1| Signal recognition particle protein [Synechococcus sp. BL107]
Length = 486
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/429 (52%), Positives = 314/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++ +++ N+ ++++RRALLEADVSLPVV+ FV V +AV
Sbjct: 1 MFDELSARFEDAVKGLRGQDKISETNVDGALKEVRRALLEADVSLPVVKDFVSEVRGKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V D+LV +MGG+ + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQKFIQVVHDQLVDVMGGDNAPLARASETPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+GV V++ GT+ KP +IA GL +AK
Sbjct: 121 GLHLKDQGRRSLMVGADVYRPAAIEQLKTLGGQIGVDVFSLGTDAKPEEIAAAGLAKAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGYDTLLVDTAGRLQIDTEMMGEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E LK +EAMI +MT ER +PELL+ P RR+R+A SG V +++A
Sbjct: 361 GMLKQGEDQLKRVEAMIGSMTESERCQPELLSSQPSRRRRIAAGSGHQPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|78185084|ref|YP_377519.1| Signal recognition particle protein [Synechococcus sp. CC9902]
gi|78169378|gb|ABB26475.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9902]
Length = 492
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/429 (52%), Positives = 314/429 (73%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G++ +++ N+ ++++RRALLEADVSLPVV+ FV V +AV
Sbjct: 1 MFDELSARFEDAVKGLRGQDKISETNVDGALKEVRRALLEADVSLPVVKDFVSEVRGKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ +++V D+LV +MGG+ + L A PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVSPDQKFIQVVHDQLVDVMGGDNAPLARASEAPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++V DVYRPAAI+QL LG Q+GV V++ GT+ KP +IA GL +AK
Sbjct: 121 GLHLKDQGRRSLMVGADVYRPAAIEQLKTLGGQIGVDVFSLGTDAKPEEIAAAGLAKAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGYDTLLVDTAGRLQIDTEMMGEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITGA+LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VE+AQ+ ++ D E+MQKK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM KI
Sbjct: 301 TLVERAQKEVELADVEKMQKKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E LK +EAMI +MT ER +PELLA P RR+R+A SG V +++A
Sbjct: 361 GMLKQGEDQLKRVEAMIGSMTESERCQPELLASQPSRRRRIATGSGHQPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|37522208|ref|NP_925585.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
gi|35213208|dbj|BAC90580.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
Length = 497
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/418 (54%), Positives = 301/418 (72%), Gaps = 4/418 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE AW KL+G++ +T+ NI E +R++RRALLEADV+ V + FV V + A+
Sbjct: 1 MFESLSEKLEGAWRKLRGQDRITEGNIDEALREVRRALLEADVNFQVAKEFVADVRDDAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELV--FAKSRPTVILLAGLQGVGKTTVSA 201
G ++ GV PDQQ +KIV D+LV LMG + L AK RP V+L+AGLQG GKTT SA
Sbjct: 61 GAEVVSGVTPDQQFIKIVHDQLVALMGEQNVPLAEPRAKGRPAVVLMAGLQGTGKTTASA 120
Query: 202 KLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
KLA YL+K G+ +L A DVYRPAAIDQL LG Q+ VPV+T G E P IA+ LE A
Sbjct: 121 KLALYLQKNGQKPLLAAADVYRPAAIDQLQTLGGQIQVPVFTLGKEADPVDIARASLERA 180
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
DV+IVDTAGRL ID AMM EL+ +K ++P E+LLVVDAMTGQEAA L F+
Sbjct: 181 IADRHDVLIVDTAGRLSIDDAMMAELERIKAAIDPEEILLVVDAMTGQEAANLTRAFHDR 240
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+GITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E L+PFYP+RMA RILGMGD
Sbjct: 241 LGITGAILTKLDGDTRGGAALSVRKISGQPIKFVGVGEKVEALQPFYPERMASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VL+ VEKAQE + DA +M++++++ FDF F+KQ R + MG + V+ MIPGM KI
Sbjct: 301 VLTLVEKAQEEIDFADAAKMEQQLLTGQFDFESFIKQMRMIKNMGPLGGVLKMIPGMNKI 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ Q+R+ E LK EAMI +MT +ER P+L+ S R++R+++ SG + + V +L+
Sbjct: 361 SDDQIRQGEVQLKKAEAMIGSMTTQERRNPDLINLS--RKRRISKGSGVSLEDVGKLL 416
>gi|33862622|ref|NP_894182.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
gi|33634538|emb|CAE20524.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
Length = 497
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/429 (51%), Positives = 320/429 (74%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L++ E A L+G+ ++ N+ + ++ +RRALL ADVSL VVR FV+ V ++AV
Sbjct: 1 MFEELSARFEDAVKGLRGQAKISDTNVEDALKQVRRALLGADVSLEVVREFVEEVRQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++RGV PDQ+ V++V +LV++MGG+ + + A+ PTV+L+AGLQG GKTT +AKL
Sbjct: 61 GAEVVRGVTPDQKFVQVVHQQLVEVMGGDNAPMAEAEDSPTVVLMAGLQGAGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LK QG+ ++VA DVYRPAAIDQL LGEQ+GV V++ G +VKP +IA GL +A++
Sbjct: 121 GLHLKDQGQRPLMVAADVYRPAAIDQLRTLGEQIGVDVFSLGDDVKPEEIAAAGLAKARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D ++VDTAGRLQID MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++G
Sbjct: 181 EGFDTLLVDTAGRLQIDTEMMEEMVRIRSAVEPDEVLLVVDSMIGQEAAELTRAFHDKVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG++LTKLDGDSRGGAALS+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGSVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ ++ D E+MQKK+ A+FDF+DFL+Q R + RMGS+ +I M+PGM K+
Sbjct: 301 TLVEKAQKEVELADVEKMQKKLQEASFDFSDFLQQMRLIKRMGSLGGLIKMMPGMNKLDD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+++ E+ LK +EAMI +MT +ER +PELLA P RR+R+A SG + V +++A
Sbjct: 361 GMLKQGEQQLKRIEAMIGSMTADERNQPELLASQPSRRRRIAGGSGHSPADVDKVLADFQ 420
Query: 504 QMRVRMKNL 512
+MR M+ +
Sbjct: 421 KMRGFMQQM 429
>gi|387219191|gb|AFJ69304.1| signal recognition particle subunit SRP54, partial [Nannochloropsis
gaditana CCMP526]
Length = 604
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/465 (49%), Positives = 323/465 (69%), Gaps = 11/465 (2%)
Query: 58 ETWGLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDI 117
++W +++ + +GR + + A M G +T+GL A L G++T+++ NI +RD+
Sbjct: 62 KSWHKGPMTTISTQSSGRSKGVAYAMMDG-ITNGLIGALKSLAGQKTISEANIDGALRDV 120
Query: 118 RRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELV 177
+RALL+ADV+L V ++AV E+A+G+ + +GV PDQ+ VKI+ DELV LMG E +EL
Sbjct: 121 KRALLDADVNLKVTNALLEAVKEKALGMDVTKGVTPDQEFVKIMYDELVDLMGAEQAELA 180
Query: 178 FAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC------MLVAGDVYRPAAIDQLV 231
A PTVILLAGLQG GKTT +AKLA Y + + + ++VA DVYRPAAIDQL
Sbjct: 181 QASKPPTVILLAGLQGAGKTTAAAKLALYCQSRAEKAEAFEKILMVAADVYRPAAIDQLR 240
Query: 232 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 291
LGE++ V V++ GT+ P IA++ LE+AK + VIVDTAGR ID+ +M E+K VK
Sbjct: 241 TLGERIDVEVFSMGTDEDPIVIARKALEKAKAQGFTTVIVDTAGRQVIDEKLMKEIKGVK 300
Query: 292 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 351
+ P EVLLVVDAMTGQEAA + FN EIG+TGAILTKLDGD+RGGAALSV+ VSGKP
Sbjct: 301 TAVKPDEVLLVVDAMTGQEAATVTARFNDEIGLTGAILTKLDGDTRGGAALSVRGVSGKP 360
Query: 352 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 411
IK +G GE +E LEPFYPDRMA RILGMGDV+S VEKAQ+ + Q+DA + KK+M+ FD
Sbjct: 361 IKFIGVGETLEKLEPFYPDRMASRILGMGDVVSLVEKAQDEINQDDAMAIFKKMMTGTFD 420
Query: 412 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREK 470
F+DF+ QTR +++MGS+S ++ MIPGM + P + E EK L + MI M PEER+
Sbjct: 421 FDDFMTQTRMISKMGSLSGMMKMIPGMAGVLPGDAMYEGEKKLFAYQEMINVMEPEERKD 480
Query: 471 PELLAESP---VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 512
P++L ++P +R KR+ ++SG++ ++ + +R+ M +
Sbjct: 481 PKMLLDNPGADLRWKRIVEESGRSMEEAKNFQREFSNLRLMMTRM 525
>gi|78042676|ref|YP_360266.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994791|gb|ABB13690.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 446
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/432 (52%), Positives = 311/432 (71%), Gaps = 3/432 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L++ L+ + KLKG+ LT+E++ +R++R ALLEADV+ VV+ F+ V E+AV
Sbjct: 2 VFENLSNKLQEVFKKLKGKGRLTEEDVNLALREVRIALLEADVNFQVVKDFIAKVKEKAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL+ LMG ++L A S PT+I+L GLQG GKTT +AKL
Sbjct: 62 GHEVLESLTPGQQVIKIVHEELINLMGKTNAKLNDAGSPPTIIMLVGLQGAGKTTTAAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK +LVA DVYRPAAI QL +LG+ + VPV+T G E P IAK + AK
Sbjct: 122 AYLLKKQGKKPLLVAADVYRPAAIKQLQVLGDTIDVPVFTMG-EQSPVDIAKASINFAKS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VI+DTAGRL I++ +MDELK +K V++P E+LLVVDAMTGQ+A + +FN E+G
Sbjct: 181 NLKNYVIIDTAGRLHINEELMDELKKIKDVVHPHEILLVVDAMTGQDAVNVAKSFNDELG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD++GGAALSVK V+G PIK G GE++E+LEPFYPDRMA RILGMGDVL
Sbjct: 241 LTGVILTKLDGDTKGGAALSVKAVTGCPIKFAGMGEKIENLEPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA+E + E A++MQ+K+ S FD DFL + + +MG + +++GMIPGMGK+
Sbjct: 301 TLIEKAKEALDAEKAQKMQEKLKSREFDLEDFLDSMQQIKKMGPLEQLLGMIPGMGKVKD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MTPEER KPE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 361 IAGMVDEKELKHIEAIIYSMTPEERRKPEIIDGS--RKKRIAKGSGTSIQEVNRLLKQFE 418
Query: 504 QMRVRMKNLMGV 515
QM+ MK G+
Sbjct: 419 QMKKLMKQFGGM 430
>gi|414083599|ref|YP_006992307.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
gi|412997183|emb|CCO10992.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
Length = 494
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 318/445 (71%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+AA NK++ + +++ ++ E MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSERLQAAMNKMRRKGKISEADVKEMMREVRLALLEADVNFKVVKEFVKTVSDRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL LMGGE S + A PTVI++ GLQG GKTT + KLA
Sbjct: 63 SEVLESLSPAQQIVKIVDEELTALMGGEQSTIQSAPKSPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KKQ + +LVA D+YRPAAI QL LGEQ+ +PV++ G +V P +IAK G+E+AK+
Sbjct: 123 NFLRKKQNRRPLLVAADIYRPAAIQQLETLGEQLDIPVFSMGDQVSPVEIAKMGIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M EL D+K V NPTE+ LVVDAMTGQ+A + +FN ++
Sbjct: 183 EHLDFVIIDTAGRLHIDETLMTELTDIKAVTNPTEIFLVVDAMTGQDAVNVAESFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK G+GE++EDLEPFYPDRMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRSVTGKPIKFTGQGEKLEDLEPFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEEM +K+ +FDFNDF++Q + MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDFDEKKAEEMTQKMQDNSFDFNDFIEQMDQLNNMGPIEDILKMIPGMNNVPG 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K M+A++ +MTP+ERE P+LL++S RR+R+A+ SG+ +V++++ Q
Sbjct: 363 LDKMQIDPKDTARMKAIVLSMTPQERENPDLLSQS--RRRRIARGSGRPIAEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
+ K +M M G+ + +
Sbjct: 421 NE----SKKMMSQMSKGNFNGMDGM 441
>gi|392529142|ref|ZP_10276279.1| signal recognition particle protein [Carnobacterium maltaromaticum
ATCC 35586]
Length = 474
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 318/445 (71%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+AA NK++ + +++ ++ E MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSERLQAAMNKMRRKGKISEADVKEMMREVRLALLEADVNFKVVKEFVKTVSDRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL LMGGE S + A PTVI++ GLQG GKTT + KLA
Sbjct: 63 SEVLESLSPAQQIVKIVDEELTALMGGEQSTIQSAPKSPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KKQ + +LVA D+YRPAAI QL LGEQ+ +PV++ G +V P +IAK G+E+AK+
Sbjct: 123 NFLRKKQNRRPLLVAADIYRPAAIQQLETLGEQLDIPVFSMGDQVSPVEIAKMGIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M EL D+K V NPTE+ LVVDAMTGQ+A + +FN ++
Sbjct: 183 EHLDFVIIDTAGRLHIDETLMTELTDIKAVTNPTEIFLVVDAMTGQDAVNVAESFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK G+GE++EDLEPFYPDRMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRSVTGKPIKFTGQGEKLEDLEPFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEEM +K+ +FDFNDF++Q + MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDFDEKKAEEMTQKMQDNSFDFNDFIEQMDQLNNMGPIEDILKMIPGMNNVPG 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K M+A++ +MTP+ERE P+LL++S RR+R+A+ SG+ +V++++ Q
Sbjct: 363 LDKMQIDPKDTARMKAIVLSMTPQERENPDLLSQS--RRRRIARGSGRPIAEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
+ K +M M G+ + +
Sbjct: 421 NE----SKKMMSQMSKGNFNGMDGM 441
>gi|374296102|ref|YP_005046293.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
gi|359825596|gb|AEV68369.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
Length = 450
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/429 (51%), Positives = 308/429 (71%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L++ L+ A KLKG+ +T++++ E MR+I+ ALLEADV+ VV+ F+ VSE+AV
Sbjct: 2 VFEGLSNKLQEAVRKLKGKGRVTEKDVKEMMREIKLALLEADVNFKVVKDFIAKVSERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL+ LMG S+LVFA PTV ++ GLQG GKTT S KL
Sbjct: 62 GQDVLESLTPGQQVIKIVHEELINLMGPGQSKLVFAPKPPTVYMMVGLQGSGKTTTSGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQGK +LVA DVYRPAAI QL ++G Q+GV V++ G + P IAK +E AK
Sbjct: 122 ANLLRKQGKKPLLVACDVYRPAAIKQLQVVGGQLGVDVFSMGDKTNPIDIAKAAIEHAKS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D+VI+DTAGRL ID+A+MDELK++K + PTE+LLVVD+MTGQ+A + TFN ++G
Sbjct: 182 KQYDLVIIDTAGRLHIDEALMDELKNIKESVRPTEILLVVDSMTGQDAVNVSETFNEKLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALSVK V+GKPIK +G GE++ DLEPF+PDRMA RILGMGDVL
Sbjct: 242 IDGVILTKLDGDTRGGAALSVKTVTGKPIKFIGMGEKLNDLEPFFPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KI 441
S +EKAQE ++ A E+++K+ + F DFL+Q + + +MG +++++GMIPG+ +
Sbjct: 302 SLIEKAQEAFDEKKALELERKMRTQQFTLEDFLEQMQQIKKMGPLNKILGMIPGINAEAL 361
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
++EK L EA+I++MT +ER P ++ S RRKR+A SG Q V++++
Sbjct: 362 NAINTADSEKELARFEAIIKSMTKQERNDPSIINGS--RRKRIAAGSGTKVQDVNKVLKS 419
Query: 502 LFQMRVRMK 510
+M+ MK
Sbjct: 420 FEEMKKMMK 428
>gi|269124183|ref|YP_003306760.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
gi|268315509|gb|ACZ01883.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
Length = 443
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/444 (47%), Positives = 306/444 (68%), Gaps = 5/444 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + KL G+ +T+ NI E +R++R ALLEADV+ VV+ FV+ + E+A
Sbjct: 1 MFKGLSDKLQETFKKLSGQSKITESNITEALREVRLALLEADVNYSVVKNFVKRIKEKAQ 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+GV P QQ +KI+ DEL++++GG+ + L + S+PT+I+L GLQG GKTT + KL
Sbjct: 61 GQEVIKGVNPRQQFIKIINDELIEVLGGQNTSLNKSTSKPTIIMLVGLQGAGKTTFAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKK+ L+ DVYRPAA QL++L Q+GVP ++ +I GL EAKK
Sbjct: 121 AKFLKKEKSKAFLIGADVYRPAAKKQLMVLANQIGVPFFSIEDSNNVLEIVNNGLLEAKK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL +D+A+M EL+DVK +NPTE+LLVVD MTGQ+A + TFN +
Sbjct: 181 EDADYVLIDTAGRLHVDEALMQELQDVKSSVNPTEILLVVDGMTGQDAVNVAKTFNDVLD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS+KE+SGKPIK + GE+++D+ F+P+R+A RILGMGDV+
Sbjct: 241 ITGVVVTKLDGDTRGGAALSIKEISGKPIKYISEGEKLDDIAVFHPERLASRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKA+E + +++A EM+ K FDF DFLKQ + + RMGS+ ++ M+PGMG +
Sbjct: 301 SLVEKAKEAIDEKEAREMEAKFRKNQFDFEDFLKQFKMIKRMGSLGGILKMLPGMGALGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I +MT EER P LL S R+ R+A+ SG QV++L+ Q
Sbjct: 361 IDLTGAEKEMKKVEAIIYSMTVEERRNPNLLKVSS-RKIRIAKGSGTDVTQVNKLLKQFE 419
Query: 504 QMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M + G++P +
Sbjct: 420 Q----MKQMMKMFNSGNIPGFGQI 439
>gi|312134783|ref|YP_004002121.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
gi|311774834|gb|ADQ04321.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
Length = 443
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/429 (50%), Positives = 302/429 (70%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + KL+G+ LT+++I E M++++ ALLEADV+ VV+ F+ V+++AV
Sbjct: 1 MFSSLSEKLQDVFKKLRGKGKLTEKDIKEAMKEVKLALLEADVNYKVVKDFINNVTQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DE+V L+GG ++L F+ S ++ ++ GLQG GKTT + KL
Sbjct: 61 GEEVLESLTPAQQVIKIVYDEMVNLLGGSDAKLTFSPSGFSIYMMVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK+ +LVA D+YRPAAI QL ++ ++VGV Y T +IAK G+E AK
Sbjct: 121 AGLLKKQGKNPLLVACDIYRPAAIKQLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +MDELK++K + PTE+LLVVDAMTGQ+A + FN ++G
Sbjct: 181 NRSDVVIIDTAGRLHINQELMDELKNIKNAVKPTEILLVVDAMTGQDAVNVAEAFNAQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK ++GKPIK G GE+MEDLEPFYPDRMA RILGMGD+L
Sbjct: 241 IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGVGEKMEDLEPFYPDRMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + Q+ AEE++KK+ S F DFL Q + + +MG +S++I MIPG+
Sbjct: 301 TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MT EER+ P ++ S R++R+A SG T Q V++L+ Q
Sbjct: 361 VDFDAGEKELKKIEAIINSMTREERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFE 418
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 419 DMKRMMKQF 427
>gi|326791391|ref|YP_004309212.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
gi|326542155|gb|ADZ84014.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
Length = 446
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/434 (49%), Positives = 315/434 (72%), Gaps = 4/434 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F QL++ L+ + +LKG+ L+ +++ +R+++ ALLEADV+ VV++F++ + E+AVG
Sbjct: 3 FDQLSTKLQDVFKQLKGKGKLSDKDVKLALREVKLALLEADVNFKVVKQFIKTIEERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL+ LMG S++ FA TVI++ GLQG GKTT SAKL+
Sbjct: 63 HEVMESLTPGQQVIKIVNEELINLMGSTQSKINFAPRGITVIMMVGLQGAGKTTTSAKLS 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+++K QGK +LVA DVYRPAAIDQL +G+QV VPV++ G++ P IA+ G+ AK+
Sbjct: 123 SHIKSQGKRPLLVACDVYRPAAIDQLTKVGKQVNVPVFSMGSDKNPVDIAQAGVNYAKEN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N+DVVI+DTAGRL ID+ +MDELK++K ++ P E+LLVVDAMTGQ+A + +F+ +G+
Sbjct: 183 NLDVVIIDTAGRLHIDEVLMDELKNIKALVKPQEILLVVDAMTGQDAVNVAESFDQTLGL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ++TKLDGDSRGGAALSVK V+ KPIK VG GE++ DLEPF+P+R+A RILGMGDVL+
Sbjct: 243 DGVVMTKLDGDSRGGAALSVKAVTNKPIKFVGMGEKLNDLEPFHPERIASRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM--GKIT 442
+EKAQ+ + ++ A+E++ K A F+F DFL+Q + + MG +S+++GMIPGM K+
Sbjct: 303 LIEKAQQNIDEKKAKELEAKFRKAEFNFEDFLEQMQQIKNMGPISQLLGMIPGMNAAKLN 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q + EK + +EA+I +MT ER P LL S R+KR+AQ SG+ Q+V++L+ Q
Sbjct: 363 EIQGQVDEKQMAHIEAIILSMTKAERLNPSLLNMS--RKKRIAQGSGRDLQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVM 516
QM+ MK G M
Sbjct: 421 EQMQGMMKQFSGAM 434
>gi|255529983|ref|YP_003090355.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
gi|255342967|gb|ACU02293.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
Length = 446
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/429 (51%), Positives = 296/429 (68%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ LKG+ ++T+ N+ E M++IR+ALL+ADV+ + F V E+A+
Sbjct: 1 MFENLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKSFTDEVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q L KI+ DEL LMGGEV+EL K+ PT+IL+AGL G GKTT + KL
Sbjct: 61 GANVLTAVSPGQLLTKIMNDELAALMGGEVTELDL-KTNPTIILIAGLNGAGKTTFTGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN+LK +GK +LVAGDVYRPAA+DQL ILGEQ+GVPVY P IA +G+ E KK
Sbjct: 120 ANFLKNKGKKPLLVAGDVYRPAAVDQLQILGEQIGVPVYANTASKDPVGIALEGIAEGKK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +V+I+DTAGRL ID+ MMDE+ VK P E+L VVDAMTGQ+A FN +
Sbjct: 180 QQNNVIIIDTAGRLAIDEQMMDEIAAVKESTKPHEILFVVDAMTGQDAVNTAKAFNDRLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+ME L+ FYP+RMA RILGMGDV+
Sbjct: 240 FTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPERMASRILGMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +++A E+QKKI FDFNDF Q + + +MG+M ++GMIPG+GK+
Sbjct: 300 SLVERAQQQFDEKEAAELQKKIRKNKFDFNDFYNQIQQIKKMGNMKDLMGMIPGVGKMMK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V + + K +EA+I++MT ERE P+ + +S RR R+A+ SG ++V++L+ Q
Sbjct: 360 -NVDIEDDAFKNVEAIIQSMTKYERENPDSIQQS--RRLRIAKGSGNKIEEVTKLIKQFE 416
Query: 504 QMRVRMKNL 512
MR MK
Sbjct: 417 DMRKVMKQF 425
>gi|403667650|ref|ZP_10932950.1| signal recognition particle-like (SRP) component [Kurthia sp. JC8E]
Length = 453
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/433 (49%), Positives = 316/433 (72%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++ K+KG+ +T++++ MR++R AL+EADV+L V+++FV++VSE+AVG
Sbjct: 3 FEGLSERLQSTIAKIKGKGKVTEQDVKVMMREVRFALIEADVNLKVIKKFVKSVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL LMGGE S + F+ PTVI++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQIIKIVQDELTNLMGGEQSPVKFSTRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK K +LVA DVYRPAA+ QL LG Q+ +PV+ GT+V P +IA++ +E AK+
Sbjct: 123 NVLRKKYNKKPLLVAADVYRPAAVKQLQTLGNQLSIPVFEKGTDVSPVEIAREAIEFAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ DVVI+DTAGRL ID+ +M ELKD++ + P EV LVVDAMTGQ+A + +FN +G
Sbjct: 183 EHHDVVIIDTAGRLHIDETLMQELKDIRAIKEPDEVFLVVDAMTGQDAVNVAESFNEAVG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTEKPIKFVGMGEKMDALEPFHPERMAQRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + QE A+E+++K + +F F+DFL Q V +MG + +I MIPGM K+
Sbjct: 303 TLIEKAQATVDQEKAKELEEKFKTQSFTFDDFLDQMSQVKKMGPLEDIIKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K + +EA+I++MT ER PE++ S RRKR+++ SG++ Q+V++L+ Q
Sbjct: 363 LDKMNFDDKQINHIEAIIQSMTVAERTNPEIINAS--RRKRISKGSGRSVQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGV 515
+M+ MK + G+
Sbjct: 421 DEMKKMMKQMTGL 433
>gi|167040350|ref|YP_001663335.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750717|ref|ZP_05491602.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914434|ref|ZP_07131750.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307724330|ref|YP_003904081.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
gi|166854590|gb|ABY92999.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750300|gb|EEU63319.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889369|gb|EFK84515.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307581391|gb|ADN54790.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
Length = 446
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/431 (49%), Positives = 304/431 (70%), Gaps = 2/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ LT+++I E MR+++ ALLEADV+ VV+ F+ +V+E+A+G
Sbjct: 3 FESLSERLQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL+ LMG S L P VI++ GLQG GKTT KLA
Sbjct: 63 QEVMESLTPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
N LKKQGK+ +LVA DV RPAAI QL ++G V VPV+T G +V P IAK ++ AK
Sbjct: 123 NLLKKQGKNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYAKSH 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N DV+I+DTAGRL +D+ +M+EL ++K+ + P E+LLVVDAMTGQ+A + ++FN + I
Sbjct: 183 NSDVIIIDTAGRLHVDEELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNARLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS+K V+ KPIK +G GE++ DLEPFYPDRMA RILGMGDVL+
Sbjct: 243 TGVILTKLDGDTRGGAALSIKAVTQKPIKYIGTGEKLTDLEPFYPDRMASRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A+E+ +K+++ F DFL+Q +++ MG + +++ MIPGM K
Sbjct: 303 LIEKAQAAIDEKKAQELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V +EK LK +EA+I++MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q +
Sbjct: 363 NVDFSEKDLKRIEAIIQSMTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEE 420
Query: 505 MRVRMKNLMGV 515
+ MK +
Sbjct: 421 TKKMMKKFADI 431
>gi|373497899|ref|ZP_09588415.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404367833|ref|ZP_10973195.1| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
gi|371962421|gb|EHO80022.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404288644|gb|EFS25760.2| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
Length = 446
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 309/445 (69%), Gaps = 8/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L S + + K++G L++ NI E ++++R +LLEADV+ VV+ F + E++V
Sbjct: 1 MLDNLGSRFQEIFKKVRGHGKLSESNIKEALKEVRMSLLEADVNYKVVKDFTNKILEKSV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++G+ P QQ +K+V DELV+L+GG S L PTV++L+GLQG GKTT +AKL
Sbjct: 61 GTDVLKGINPGQQFIKVVNDELVELLGGTNSRLTKGVRNPTVLMLSGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYLKKQG+S ++V DVYRPAAI QL +LGEQV VPVY I + GL +AK+
Sbjct: 121 ANYLKKQGESVLMVGADVYRPAAIKQLQVLGEQVDVPVYAEEDNKDAVAICEHGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +I+DTAGRL ID+ +MDEL+++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 LNSTYMIIDTAGRLHIDEKLMDELRNIKKAVRPQEILLVVDAMIGQDAVNLAESFNNVLS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V GKPIK VG GER++D+E F+P+R+ RILGMGDV+
Sbjct: 241 IDGIVLTKLDGDTRGGAALSIKSVVGKPIKFVGVGERIDDIELFHPERLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ + +EDA+ +++KI + FD NDFLKQ + + ++GS+ ++ MIPGMG++
Sbjct: 301 SLVEKAQSAIDEEDAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKMIPGMGQV-- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L + R+KR+A SG +++L+ Q
Sbjct: 359 GDLAPAEKEMKKVEAIIQSMTKEERKKPDILKAN--RKKRIALGSGTEVADINRLLKQFE 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLE 528
Q MK +M + GG +P ++
Sbjct: 417 Q----MKGMMKMFSGGKMPQFPGMK 437
>gi|167037689|ref|YP_001665267.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116104|ref|YP_004186263.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389503|ref|ZP_08211070.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392940886|ref|ZP_10306530.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
gi|166856523|gb|ABY94931.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929195|gb|ADV79880.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994508|gb|EGD52933.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392292636|gb|EIW01080.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
Length = 446
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/431 (49%), Positives = 304/431 (70%), Gaps = 2/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ LT+++I E MR+++ ALLEADV+ VV+ F+ +V+E+A+G
Sbjct: 3 FESLSERLQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL+ LMG S L P VI++ GLQG GKTT KLA
Sbjct: 63 QEVMESLTPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
N LKKQGK+ +LVA DV RPAAI QL ++G V VPV+T G +V P IAK ++ A+
Sbjct: 123 NLLKKQGKNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYARSH 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N DV+I+DTAGRL ID+ +M+EL ++K+ + P E+LLVVDAMTGQ+A + ++FN + I
Sbjct: 183 NSDVIIIDTAGRLHIDEELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS+K V+ KPIK VG GE++ DLEPFYPDRMA RILGMGDVL+
Sbjct: 243 TGVILTKLDGDTRGGAALSIKAVTQKPIKYVGTGEKLTDLEPFYPDRMASRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A+E+ +K+++ F DFL+Q +++ MG + +++ MIPGM K
Sbjct: 303 LIEKAQAAIDEKKAQELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V +EK LK +EA+I++MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q +
Sbjct: 363 NVDISEKDLKRIEAIIQSMTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEE 420
Query: 505 MRVRMKNLMGV 515
+ MK +
Sbjct: 421 TKKMMKKFADI 431
>gi|345017770|ref|YP_004820123.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033113|gb|AEM78839.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 446
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/431 (49%), Positives = 304/431 (70%), Gaps = 2/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ LT+++I E MR+++ ALLEADV+ VV+ F+ +V+E+A+G
Sbjct: 3 FESLSERLQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL+ LMG S L P VI++ GLQG GKTT KLA
Sbjct: 63 QEVMESLTPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
N LKKQGK+ +LVA DV RPAAI QL ++G V VPV+T G +V P IAK ++ A+
Sbjct: 123 NLLKKQGKNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYARSH 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N DV+I+DTAGRL ID+ +M+EL ++K+ + P E+LLVVDAMTGQ+A + ++FN + I
Sbjct: 183 NSDVIIIDTAGRLHIDEELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS+K V+ KPIK VG GE++ DLEPFYPDRMA RILGMGDVL+
Sbjct: 243 TGVILTKLDGDTRGGAALSIKAVTQKPIKYVGAGEKLTDLEPFYPDRMASRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A+E+ +K+++ F DFL+Q +++ MG + +++ MIPGM K
Sbjct: 303 LIEKAQAAIDEKKAQELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V +EK LK +EA+I++MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q +
Sbjct: 363 NVDISEKDLKRIEAIIQSMTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEE 420
Query: 505 MRVRMKNLMGV 515
+ MK +
Sbjct: 421 TKKMMKKFADI 431
>gi|149280108|ref|ZP_01886232.1| signal recognition particle protein [Pedobacter sp. BAL39]
gi|149229122|gb|EDM34517.1| signal recognition particle protein [Pedobacter sp. BAL39]
Length = 446
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/429 (50%), Positives = 296/429 (68%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ LKG+ ++T+ N+ E M++IR+ALL+ADV+ + F V E+A+
Sbjct: 1 MFENLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKSFTDDVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V P Q L K++ DEL LMGGEV+E+ K+ PT+IL+AGL G GKTT + KL
Sbjct: 61 GLNVLTAVSPGQLLTKVMNDELTALMGGEVTEIDL-KNNPTIILIAGLNGAGKTTFTGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYLK +GK +LVAGDVYRPAA+DQL ILGEQ+GVPVY P IA +G+ E KK
Sbjct: 120 ANYLKSKGKKPLLVAGDVYRPAAVDQLQILGEQIGVPVYANIESKDPVGIALEGIAEGKK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ +V+I+DTAGRL ID+ MMDE+ VK P E+L VVDAMTGQ+A FN +
Sbjct: 180 QHNNVIIIDTAGRLAIDEQMMDEIAAVKENTKPHEILFVVDAMTGQDAVNTAKAFNDRLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+ME L+ FYP+RMA RILGMGDV+
Sbjct: 240 FTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPERMASRILGMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +++A E+QKKI FDFNDF Q + + +MG+M ++GMIPG+ K+
Sbjct: 300 SLVERAQQQFDEKEAAELQKKIRKNKFDFNDFYSQIQQIKKMGNMKDLMGMIPGVSKMMK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V + + K +EA+I++MT ERE P+ + +S RR R+A+ SG + V++L+ Q
Sbjct: 360 -NVEIEDDAFKNVEAIIQSMTKYERENPDSIQQS--RRARIAKGSGNKVEDVTKLIKQFE 416
Query: 504 QMRVRMKNL 512
MR MK
Sbjct: 417 DMRKVMKQF 425
>gi|158320496|ref|YP_001513003.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
gi|158140695|gb|ABW19007.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
Length = 448
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/429 (49%), Positives = 299/429 (69%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KLK + LT++++ E MR++R ALLEADV+ VV+ F+ V E+AV
Sbjct: 2 VFEGLAEKLQDTFKKLKNKGKLTEKDVAEAMREVRLALLEADVNFKVVKDFINKVKERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ + P QQ++KIV +EL +LMG S++ F+ PT+I+L GLQG GKTT + KL
Sbjct: 62 GIEVLESLTPGQQVIKIVNEELTELMGTSQSKINFSSKPPTIIMLVGLQGAGKTTTTGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK +L+A D+YRPAAI QL ++GE+VGVPV+T G + P I+K G++
Sbjct: 122 AGMLKKQGKRPLLIACDIYRPAAIKQLQVVGEKVGVPVFTMGDKQSPVDISKAGIDHGMS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DV+++DTAGRL +D+ +MDELKD+K + P E+LLVVD+MTGQ+A + FN ++G
Sbjct: 182 HGNDVILIDTAGRLHVDEELMDELKDIKNDVKPHEILLVVDSMTGQDAVNVAEHFNEKLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALSV+ V+ KPIK G GE+++DLEPFYPDRMA RILGMGD+L
Sbjct: 242 IDGVILTKLDGDTRGGAALSVRAVTNKPIKFTGLGEKLDDLEPFYPDRMASRILGMGDML 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + A+E++ KI + F F+DFL Q V +MGS+S+++ MIPGMG
Sbjct: 302 SLIEKAQANFDAKKAKELENKIKTQQFTFDDFLDQLEQVQKMGSLSQILEMIPGMGGKQL 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK L ++A+I++MT ER P ++ S RRKR+A SG + QQV++L+ Q
Sbjct: 362 KGMDVDEKELVYVKAIIQSMTKNERHDPSIINGS--RRKRIASGSGTSVQQVNKLLKQFE 419
Query: 504 QMRVRMKNL 512
Q R MK
Sbjct: 420 QTRKMMKQF 428
>gi|150390508|ref|YP_001320557.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
gi|149950370|gb|ABR48898.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
Length = 447
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/429 (50%), Positives = 297/429 (69%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ KLKG+ LT+ ++ E MR+++ ALLEADV+ VV+ FV+ V E+A
Sbjct: 2 IFEGLADKLQNTLQKLKGKGKLTENDVAEAMREVKLALLEADVNFKVVKDFVKIVKERAT 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + P QQ++KIV +EL +LMG S++ F+ PTVI+L GLQG GKTT S KL
Sbjct: 62 GSEVFESLTPGQQVIKIVNEELTELMGTTQSKITFSSKPPTVIMLVGLQGAGKTTTSGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YLKKQGK +LVAGD+YRPAAI QL ++G QV VPV+T G ++ P IAK G+E K
Sbjct: 122 AGYLKKQGKRPLLVAGDIYRPAAIKQLEVVGSQVDVPVFTLGDQISPVDIAKAGVEHGIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVV++DTAGRL ID +MDELKD+K + P E+LLVVD+MTGQ+A + F+ ++G
Sbjct: 182 HGNDVVLIDTAGRLHIDDTLMDELKDIKTTVKPQEILLVVDSMTGQDAVNVAEHFDTKLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSV+ V+ KPIK VG GE++ DLEPF+PDRMA RILGMGDVL
Sbjct: 242 VDGIILTKLDGDTRGGAALSVRAVTRKPIKFVGLGEKLNDLEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ ++ A+E++ KI + F F DFL+Q + V MG +S+++ MIPG G
Sbjct: 302 SLIEKAQVSFDEKKAKELENKIKTQQFTFEDFLEQLQQVQSMGPISQLLEMIPGAGGKQM 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK L ++A+I++MT ER+ P ++ S RRKR+A+ SG + QV++L+ Q
Sbjct: 362 KNLEVDEKELVHIQAIIQSMTTGERKTPTIINGS--RRKRIAKGSGTSVAQVNRLIKQFD 419
Query: 504 QMRVRMKNL 512
Q + MK
Sbjct: 420 QTKKMMKQF 428
>gi|335040129|ref|ZP_08533265.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
gi|334179954|gb|EGL82583.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
Length = 449
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/429 (50%), Positives = 309/429 (72%), Gaps = 3/429 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +T+ ++ E MR++R ALLEADV+ VVR FV V E+AVG
Sbjct: 3 FEGLADRLQETLRKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVRDFVNRVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V +EL LMGGE ++L ++ PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVLKSLTPGQQVIKVVNEELTALMGGENAKLAVSQRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
YL+KQ ++ +LVA D+YRPAAI QL +LGEQ+ VPV++ G + P IAK+ +E+AK++
Sbjct: 123 KYLQKQNRNPLLVAADIYRPAAIKQLQVLGEQINVPVFSLGDKESPVVIAKKAIEQAKEQ 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+ D V++DTAGRL ID+ +M+EL +K + P E+LLVVDAMTGQ+A + +FN ++ I
Sbjct: 183 HNDYVLIDTAGRLHIDETLMNELNQIKEEVRPDEILLVVDAMTGQDAVNVAQSFNEQLNI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALSVK V+G+PIK VG GE+++ LEPF+PDRMA RILGMGDVL+
Sbjct: 243 TGVILTKLDGDTRGGAALSVKAVTGQPIKFVGMGEKLDALEPFHPDRMASRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + QE A+E+++KI F F+DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 LIEKAQREVDQEKAKELERKIRKMEFTFDDFLEQLEQVRNMGPLDELLSMLPGAGKMKGL 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK LK +EA+I +MT EE++ PE++ S RRKR+AQ SG + Q V++L+ Q
Sbjct: 363 KDLKVDEKKLKQVEAIIRSMTKEEKQNPEIINAS--RRKRIAQGSGTSVQDVNRLLKQFQ 420
Query: 504 QMRVRMKNL 512
M+ MK +
Sbjct: 421 DMKKMMKQM 429
>gi|261880314|ref|ZP_06006741.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
gi|270333004|gb|EFA43790.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
Length = 451
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/432 (51%), Positives = 300/432 (69%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLTDRLERSFKILKGEGKITEVNVAETLKDVRRALLDADVNFKVAKNFTNTVKDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q LVKIV DEL KLMGGE SEL + +P V+L++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPSQLLVKIVHDELAKLMGGEASELHLS-GKPAVVLMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+GK+ +LVA DVYRPAAI+QL ++GEQVGVPVYT ++IA ++EAK
Sbjct: 120 ANLLKNKRGKNPLLVACDVYRPAAIEQLKVVGEQVGVPVYTEEGNKNVNEIALHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM+E+ +K ++P E L VVD+MTGQ+A FN I
Sbjct: 180 AKGNDVVIVDTAGRLAVDEDMMNEIASLKEAISPDETLFVVDSMTGQDAVNTAKEFNDRI 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME L+ F+PDRMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEALDVFHPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIQKNKFDFNDFLNQIEQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + +EA+I++MTP ER PE+L +S RR R+A+ SG + Q+V++LV Q
Sbjct: 360 K-DIDIDDNAFVGIEAIIKSMTPRERTNPEVLNQS--RRLRIAKGSGTSIQEVNRLVKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|399047100|ref|ZP_10739232.1| signal recognition particle protein [Brevibacillus sp. CF112]
gi|398054933|gb|EJL47031.1| signal recognition particle protein [Brevibacillus sp. CF112]
Length = 471
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/431 (50%), Positives = 303/431 (70%), Gaps = 3/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L + L+ A++KL+G + + + E MR++R ALLEADV+ VV+ FV V E+AVG
Sbjct: 3 FESLANRLQNAFDKLRGRGKIDETVVNEAMREVRLALLEADVNFKVVKDFVARVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q ++KIV +ELV LMGG V++L A PTVI++AGLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQMVIKIVNEELVALMGGSVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
YL+KQ K +LVA D+YRPAAI QL +LGEQ+ VPV+T G +V P IA+Q +E AK
Sbjct: 123 KYLQKQNKKPLLVAADIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVDIARQAIEHAKAN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++DVVI+DTAGRL ID+A+MDELK ++ V P E+LLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HLDVVILDTAGRLHIDEALMDELKQIREVAKPDEILLVVDAMTGQDAVNVAESFNSQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + +E A +M++++ F F+ FL + + +G ++GM+PGM K+
Sbjct: 303 LIEKAQASVDEEKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-G 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
++ EK + +EA+ ++MT ER P+LL S RRKR+A SG + Q+V++ + Q +
Sbjct: 362 KMNVDEKQIARVEAIAKSMTKAERANPDLLNAS--RRKRIASGSGTSIQEVNRFIKQFEE 419
Query: 505 MRVRMKNLMGV 515
M+ MK GV
Sbjct: 420 MKKMMKQFTGV 430
>gi|433546093|ref|ZP_20502431.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
gi|432182709|gb|ELK40272.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
Length = 471
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/431 (50%), Positives = 303/431 (70%), Gaps = 3/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L + L+ A++KL+G + + + E MR++R ALLEADV+ VV+ FV V E+AVG
Sbjct: 3 FESLANRLQNAFDKLRGRGKIDETVVNEAMREVRLALLEADVNFKVVKDFVARVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q ++KIV +ELV LMGG V++L A PTVI++AGLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQMVIKIVNEELVALMGGSVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
YL+KQ K +LVA D+YRPAAI QL +LGEQ+ VPV+T G +V P IA+Q +E AK
Sbjct: 123 KYLQKQNKKPLLVAADIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVDIARQAIEHAKAN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++DVVI+DTAGRL ID+A+MDELK ++ V P E+LLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HLDVVILDTAGRLHIDEALMDELKQIREVAKPDEILLVVDAMTGQDAVNVAESFNSQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + +E A +M++++ F F+ FL + + +G ++GM+PGM K+
Sbjct: 303 LIEKAQASVDEEKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-G 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
++ EK + +EA+ ++MT ER P+LL S RRKR+A SG + Q+V++ + Q +
Sbjct: 362 KMNVDEKQIARVEAIAKSMTKAERANPDLLNAS--RRKRIASGSGTSIQEVNRFIKQFEE 419
Query: 505 MRVRMKNLMGV 515
M+ MK GV
Sbjct: 420 MKKMMKQFSGV 430
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/446 (49%), Positives = 309/446 (69%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A+ L+G+ +++ ++ E MR+IR ALLEADV+ VVR+FV+ V E+A G
Sbjct: 3 FEGLTDRLQKAFKNLRGKGKISESDLRETMREIRLALLEADVNFKVVRQFVKTVQEKAKG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL +MG + LV + PTVI++ GLQG GKTT + KLA
Sbjct: 63 ADVLEGLNPAQQIVKIVNDELTNMMGKSATPLVKSDKIPTVIMMVGLQGAGKTTSAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + +++A DVYRPAAI+QL +GEQVGVPV+ GT+V P QI + GL+EA K
Sbjct: 123 KKLKTDDHARPLMIAADVYRPAAIEQLEKVGEQVGVPVFQEGTDVDPVQIVQDGLKEADK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N D V++DTAGRLQID+ +MDELK++K+V NP ++LLVVDAMTGQ A FN +
Sbjct: 183 NNNDYVLIDTAGRLQIDENLMDELKNIKKVANPNDILLVVDAMTGQNAVDTAVGFNDALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+ KPI VG+GE+++DL+ F+PDRMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTDKPIMFVGQGEKLDDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
SF+EK Q+ + A+E+ +KI +FDF+DF+ Q + +MG + ++ MIPGM P
Sbjct: 303 SFIEKTQKEYDENQAKELTEKIKENSFDFDDFIDQLEQIQKMGPIQDLVKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K L ++A+I +MT EER P++L +P RR+R+A+ S + QQV++L+ Q
Sbjct: 362 ALKNLNVNPKDLDHIKAIIYSMTSEERSNPDVL--NPSRRRRIARGSAQPIQQVNRLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M + G++ LSN+
Sbjct: 420 FDQ----MKKMMNKVSNGNMSGLSNM 441
>gi|226313205|ref|YP_002773099.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
gi|226096153|dbj|BAH44595.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
Length = 470
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 305/430 (70%), Gaps = 3/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L + L+ A++KL+G + + + E MR++R ALLEADV+ VV+ FV V E+AVG
Sbjct: 3 FESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q ++KIV +ELV LMGG V++L A PTVI++AGLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
YL+KQ + +LVAGD+YRPAAI QL +LGEQ+ VPV+T G +V P +IA+Q +E AK
Sbjct: 123 KYLQKQNRKPLLVAGDIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVEIARQAIEHAKTN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++DVV++DTAGRL ID+A+MDELK ++ V P E+LLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HLDVVLIDTAGRLHIDEALMDELKQIREVTKPDEILLVVDAMTGQDAVNVAESFNSQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A +M++++ F F+ FL + + +G ++GM+PGM K+
Sbjct: 303 LIEKAQASVDEDKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-G 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
++ EK + +EA+ ++MT +ER P+LL S RRKR+A SG + Q+V++ + Q +
Sbjct: 362 KMNVDEKQIARVEAIAKSMTKQERANPDLLNAS--RRKRIASGSGTSIQEVNRFLKQFEE 419
Query: 505 MRVRMKNLMG 514
M+ MK G
Sbjct: 420 MKKMMKQFSG 429
>gi|387793034|ref|YP_006258099.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
gi|379655867|gb|AFD08923.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
Length = 444
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/428 (50%), Positives = 295/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A+ LKG ++T+ N+ E ++++R+ALL+ADV+ + F V E+A+
Sbjct: 1 MFDNLSDKLDRAFKVLKGHGSITEINVAETVKEVRKALLDADVNYKTAKAFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V P Q +VK+V DELV+LMGG VSEL K P++IL+AGL G GKTT + KL
Sbjct: 61 GMNVLTSVSPGQLMVKVVNDELVELMGGNVSELDI-KQNPSIILIAGLNGAGKTTFTGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK Q GK LVA DVYRPAAIDQL +L EQ+GVPVYT P +IA+ G+ +AK
Sbjct: 120 ANYLKTQKGKKPFLVAADVYRPAAIDQLKVLSEQIGVPVYTDYESKDPVKIAEAGIAKAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
VVI+DTAGRL ID+ MM+E+ DVK P E+L VVD+MTGQ+A FN +
Sbjct: 180 ADGNTVVIIDTAGRLAIDEQMMNEIADVKAATKPHEILFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+M+ ++ FYPDRMA RILGMGDV
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMDAIDVFYPDRMASRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ ++ A E+QKKI FDFNDFL Q + +MG++ ++GMIPG+GK
Sbjct: 300 VSLVERAQQQFDEKQAAELQKKIRKNKFDFNDFLSQLNQIKKMGNIKDLMGMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP ERE PEL+ + RR+R+A SG + +V++L+ Q
Sbjct: 360 K-DVDIDDDAFKHIEAIIQSMTPTERENPELINGN--RRQRIANGSGTSIAEVNKLLKQF 416
Query: 503 FQMRVRMK 510
MR MK
Sbjct: 417 EDMRKMMK 424
>gi|297544730|ref|YP_003677032.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842505|gb|ADH61021.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 446
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/431 (49%), Positives = 303/431 (70%), Gaps = 2/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ LT+++I E MR+++ ALLEADV+ VV+ F+ +V+E+A+G
Sbjct: 3 FESLSERLQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL+ LMG S L P VI++ GLQG GKTT KLA
Sbjct: 63 QEVMESLTPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
N LKKQGK+ +LVA DV RPAAI QL ++G V VPV+T G + P IAK ++ A+
Sbjct: 123 NLLKKQGKNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSH 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N DV+I+DTAGRL ID+ +M+EL ++KR + P E+LLVVDAMTGQ+A + ++FN + I
Sbjct: 183 NSDVIIIDTAGRLHIDEELMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS+K V+ KPIK VG GE++ DLEPFYP+RMA RILGMGDVL+
Sbjct: 243 TGVILTKLDGDTRGGAALSIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A+E+ +K+++ F DFL+Q +++ MG + +++ MIPGM K
Sbjct: 303 LIEKAQAAIDEKKAQELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V +EK LK +EA+I++MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q +
Sbjct: 363 NVDISEKDLKRIEAIIQSMTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEE 420
Query: 505 MRVRMKNLMGV 515
+ MK +
Sbjct: 421 TKKMMKKFADI 431
>gi|28210935|ref|NP_781879.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
gi|28203374|gb|AAO35816.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
Length = 451
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/433 (47%), Positives = 312/433 (72%), Gaps = 2/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ + KL+G+ L++++I E MR++R ALLEADV+ +V+ FV++VSE+ G
Sbjct: 3 FDGLASKLQETFKKLRGKGKLSEKDIKEAMREVRLALLEADVNYKIVKDFVKSVSEKCNG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV DEL++LMG + SE+ F ++PTVI+L GLQG GKTT++ KLA
Sbjct: 63 KEVLESLTPGQQVVKIVNDELIELMGSKESEINFEANKPTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K+ K +LVA D+YRPAAI QL ++G Q+ VPV+T G + P I+K ++ AK+
Sbjct: 123 LQLRKKNKKPLLVACDIYRPAAIKQLQVVGSQIDVPVFTLGDKTNPVDISKAAIKHAKEN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N++ +I+DTAGRL ID+ +MDELK +K + P EVLLVVD+MTGQ+A + +FN ++ I
Sbjct: 183 NLNTIIIDTAGRLHIDENLMDELKSIKENIEPNEVLLVVDSMTGQDAINVAESFNEKLNI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++GKPIK +G GE+M DLE FYP+RMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKAMTGKPIKFIGIGEKMNDLEVFYPERMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKA++ + +++AE++ +IM+ F+ DFL + + ++G +++++ M+PG ++
Sbjct: 303 LIEKAEQEIDKDEAEKIGSRIMNQEFNLEDFLSAMQQMKKLGPLNKLVEMLPGANSKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ EK LK +E++I +MT +ER+ P L++ SP R+KR+A SG T QQV++++
Sbjct: 363 GIDFDKGEKDLKRIESIISSMTIKERKNPSLVSGSPTRKKRIANGSGTTVQQVNKILKDF 422
Query: 503 FQMRVRMKNLMGV 515
MR MK + G+
Sbjct: 423 ENMRKMMKQMNGI 435
>gi|325955366|ref|YP_004239026.1| signal recognition particle protein [Weeksella virosa DSM 16922]
gi|323437984|gb|ADX68448.1| signal recognition particle protein [Weeksella virosa DSM 16922]
Length = 458
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/428 (50%), Positives = 298/428 (69%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A + LKG+ +T+ N+ E ++++RRAL++ADVS V + F V + A+
Sbjct: 1 MFQNLQDKLDKALHTLKGKGQITEINVAETVKEVRRALVDADVSYKVAKEFTDTVRKNAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q +VKIV DELVKLMGGE SEL + + PT+IL+AGLQG GKTT S KL
Sbjct: 61 GENVLTSLNPSQLMVKIVHDELVKLMGGEHSELTIS-ANPTIILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVAGDVYRPAAI+QL +LGEQ+GV VY P +IA++ + AK
Sbjct: 120 ANYLKTKKNKKPLLVAGDVYRPAAINQLKVLGEQIGVEVYAEEENKNPVEIAEKAIAYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +V+I+DTAGRL +D+ MMDE++ V NPTE L VVD+MTGQ+A FN +
Sbjct: 180 QNGNNVIILDTAGRLAVDQEMMDEIRRVHAATNPTETLFVVDSMTGQDAVNTARAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+G +LTKLDGD+RGGAAL++K V KPIK + GE+ME L+ FYP RMA RILGMGDV
Sbjct: 240 DYSGVVLTKLDGDTRGGAALTIKTVVDKPIKFISTGEKMEALDLFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI NFDF+DFLKQ + + RMG+M ++GMIPG GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIAKNNFDFDDFLKQIQQIKRMGNMKDLVGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP+ER+ P+++ S R+ R+A+ SG + Q+V+QL+ Q
Sbjct: 360 -KDVEINDDAFKGVEAIIHSMTPQERKNPKIIDNS--RKNRIAKGSGTSIQEVNQLLKQF 416
Query: 503 FQMRVRMK 510
+M MK
Sbjct: 417 SEMGKMMK 424
>gi|294783942|ref|ZP_06749264.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
gi|294479754|gb|EFG27533.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
Length = 444
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L+ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSDSNIKDALREVKMSLLEADVNYKVVKDFTNRISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++KR + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMNELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTIEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK NL G+ +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNLGGMGKGGKFP 443
>gi|340758049|ref|ZP_08694641.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
gi|251836338|gb|EES64875.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
Length = 446
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 306/445 (68%), Gaps = 8/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L S + + K++G L++ NI E ++++R +LLEADV+ VV+ F + E++V
Sbjct: 1 MLDNLGSRFQEIFKKVRGHGKLSESNIKEALKEVRMSLLEADVNYKVVKDFTNKILEKSV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++G+ P QQ +K+V DELV+L+GG S L PTV++L+GLQG GKTT + KL
Sbjct: 61 GTDVLKGINPGQQFIKVVNDELVELLGGTNSRLTKGVRNPTVLMLSGLQGAGKTTFAVKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYLKKQG+S ++V DVYRPAAI QL +LGEQ+ VPVY I + GL +AK+
Sbjct: 121 ANYLKKQGESVLMVGADVYRPAAIKQLQVLGEQINVPVYAEEDNKDTVAICEHGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +I+DTAGRL ID+ +M+EL+ +K+ + P E+LLVVDAM GQ+A L FN +
Sbjct: 181 LNSTYMIIDTAGRLHIDEKLMEELRSIKKAVRPQEILLVVDAMIGQDAVNLAEAFNNVLS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V GKPIK VG GER++D+E F+P+R+ RILGMGDV+
Sbjct: 241 IDGIVLTKLDGDTRGGAALSIKSVVGKPIKFVGVGERIDDIELFHPERLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ + ++DA+ +++KI + FD NDFLKQ + + ++GS+ ++ MIPGMG+I
Sbjct: 301 SLVEKAQSAIDEDDAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKMIPGMGQI-- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+KR+A SG V++L+ Q
Sbjct: 359 GDIAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKKRIALGSGTEVADVNRLLKQFE 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLE 528
Q MK +M + GG +P ++
Sbjct: 417 Q----MKGMMKMFSGGKMPQFPGMK 437
>gi|302872185|ref|YP_003840821.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575044|gb|ADL42835.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 443
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/429 (49%), Positives = 300/429 (69%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + KL+G+ LT+++I E M++++ ALLEADV+ VV+ F+ V+++AV
Sbjct: 1 MFSSLSEKLQDVFKKLRGKGKLTEKDIKEAMKEVKLALLEADVNYKVVKDFINTVTQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DE+V L+GG ++L F+ S ++ ++ GLQG GKTT + KL
Sbjct: 61 GEEVLESLTPAQQVIKIVYDEMVNLLGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK+ LVA D+YRPAAI QL ++ ++VGV Y T +IAK G+E AK
Sbjct: 121 AGLLKKQGKNPSLVACDIYRPAAIKQLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +MDELK++K + PTE+LLVVDAMTGQ+A + FN ++G
Sbjct: 181 NRSDVVIIDTAGRLHINQELMDELKNIKNAVKPTEILLVVDAMTGQDAVNVAEAFNDQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGDVL
Sbjct: 241 IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGVGEKMEDLEVFHPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + Q+ AEE++KK+ S F DFL Q + + +MG +S++I MIPG+
Sbjct: 301 TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MT EER+ P ++ S R++R+A SG T Q V++L+ Q
Sbjct: 361 VDFDAGEKELKKIEAIINSMTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFE 418
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 419 DMKRMMKQF 427
>gi|373954810|ref|ZP_09614770.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
gi|373891410|gb|EHQ27307.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
Length = 442
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/430 (50%), Positives = 298/430 (69%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A+ LKG+ T+T+ N+ E M++IR+ALL+ADV+ + F V ++A+
Sbjct: 1 MFENLSDKLDRAFKVLKGQGTITEINVAETMKEIRKALLDADVNYKTAKAFTDDVRQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q L KI+ DEL +LMGG +EL F + PT+IL+AGL G GKTT + KL
Sbjct: 61 GQNVLTSISPGQLLTKIMNDELTQLMGGSTAELNFPAT-PTIILIAGLNGAGKTTFTGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK Q GK +LVAGDVYRPAAI+QL +LGEQ+GVPVY P IA++G+ AK
Sbjct: 120 ANFLKTQKGKKPLLVAGDVYRPAAIEQLKVLGEQIGVPVYANLESKDPIAIAREGVALAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVIVDTAGRL ID+AMM E++ VK LNP E+L VVD+MTGQ+A FN +
Sbjct: 180 QNGNNVVIVDTAGRLSIDEAMMVEIEQVKAALNPHEILFVVDSMTGQDAVNTAKVFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+ME L+ F+PDRMA RILGMGDV
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFHPDRMASRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ ++ A E+QKKI FDFNDF Q + + +MG+M ++GMIPG+GK
Sbjct: 300 VSLVERAQQQFDEKQAAELQKKIRKNKFDFNDFYGQIQQIKKMGNMKDLMGMIPGVGKAM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP E+E P+ + +S RR R+A SG Q+V++L+ Q
Sbjct: 360 -KDVEIDDNAFKAIEAIIQSMTPFEKENPDSINQS--RRNRIANGSGTNLQEVNRLIKQF 416
Query: 503 FQMRVRMKNL 512
MR MK +
Sbjct: 417 DDMRKVMKQM 426
>gi|289578454|ref|YP_003477081.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
gi|289528167|gb|ADD02519.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
Length = 446
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/431 (49%), Positives = 303/431 (70%), Gaps = 2/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ LT+++I E MR+++ ALLEADV+ VV+ F+ +V+E+A+G
Sbjct: 3 FESLSERLQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL+ LMG S L P VI++ GLQG GKTT KLA
Sbjct: 63 QEVMESLTPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
N LKKQGK+ +LVA DV RPAAI QL ++G V VPV+T G + P IAK ++ A+
Sbjct: 123 NLLKKQGKNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSH 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N DV+I+DTAGRL ID+ +M+EL ++KR + P E+LLVVDAMTGQ+A + ++FN + I
Sbjct: 183 NSDVIIIDTAGRLHIDEELMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALS+K V+ KPIK VG GE++ DLEPFYP+RMA RILGMGDVL+
Sbjct: 243 TGVVLTKLDGDTRGGAALSIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A+E+ +K+++ F DFL+Q +++ MG + +++ MIPGM K
Sbjct: 303 LIEKAQAAIDEKKAQELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V +EK LK +EA+I++MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q +
Sbjct: 363 NVDISEKDLKRIEAIIQSMTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEE 420
Query: 505 MRVRMKNLMGV 515
+ MK +
Sbjct: 421 TKKMMKKFADI 431
>gi|336400339|ref|ZP_08581118.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
gi|336162527|gb|EGN65491.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
Length = 443
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/446 (48%), Positives = 311/446 (69%), Gaps = 11/446 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEENNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E FYPDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFYPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK ++ +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMRKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFD 416
Query: 504 QMRVRMKNL------MGVM-EGGSLP 522
QM+ MK MG+M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|262065932|ref|ZP_06025544.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
gi|291380412|gb|EFE87930.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
Length = 444
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L+ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSDSNIKDALREVKMSLLEADVNYKVVKDFTNRISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL ID+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHIDETLMNELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTIEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK NL G+ +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNLGGMGKGGKFP 443
>gi|270290355|ref|ZP_06196580.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|418069039|ref|ZP_12706319.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|427441885|ref|ZP_18925463.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
gi|270281136|gb|EFA26969.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|357537772|gb|EHJ21795.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|425786911|dbj|GAC46251.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
Length = 477
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 305/441 (69%), Gaps = 10/441 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ +N L+ + +T+ ++ + MR+IR ALLEADV+ VV++FV+ V EQA+G
Sbjct: 3 FEGLTERLQKTFNNLRKKGKVTEADLRDTMREIRLALLEADVNFTVVKKFVKTVREQALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VK+V DELVK+MG E S L A PTVI++AGLQG GKTT + KLA
Sbjct: 63 SDILEGLNPAQQIVKLVNDELVKMMGTEASPLNQAPKIPTVIMMAGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + K+ +L+A DVYRPAAIDQLV +GEQ+ VPVY GT+V P +I + GLE+A +
Sbjct: 123 LKLKNEKKARPLLIAADVYRPAAIDQLVQVGEQIDVPVYQEGTDVSPVEIVRHGLEQAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M EL D+K + +P E+LLVVDAMTGQ A FN ++
Sbjct: 183 NKNDYVFIDTAGRLQIDEKLMQELADIKDLAHPDEILLVVDAMTGQNAVNTAEGFNDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L
Sbjct: 243 VTGVILTKLDGDTRGGAALSIRAVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EK Q+ ++ A EM +KI FDFNDFL Q V MG + ++ MIPGM P
Sbjct: 303 TLIEKTQKEFDEKQAAEMSQKIRENTFDFNDFLDQMNQVQSMGPIEDIVKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++ +A++ +MT +ERE P++L +P RR+R+A SG+ +V++++ Q
Sbjct: 362 ALKNINVDPKDIEHTKAIVYSMTKQERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQ 419
Query: 502 LFQMRVRMKNL----MGVMEG 518
QM+ M + G MEG
Sbjct: 420 FNQMKKMMNQMSKGNFGPMEG 440
>gi|304384767|ref|ZP_07367113.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
gi|304328961|gb|EFL96181.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
Length = 487
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 305/441 (69%), Gaps = 10/441 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ +N L+ + +T+ ++ + MR+IR ALLEADV+ VV++FV+ V EQA+G
Sbjct: 13 FEGLTERLQKTFNNLRKKGKVTEADLRDTMREIRLALLEADVNFTVVKKFVKTVREQALG 72
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VK+V DELVK+MG E S L A PTVI++AGLQG GKTT + KLA
Sbjct: 73 SDILEGLNPAQQIVKLVNDELVKMMGTEASPLNQAPKIPTVIMMAGLQGAGKTTTTGKLA 132
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + K+ +L+A DVYRPAAIDQLV +GEQ+ VPVY GT+V P +I + GLE+A +
Sbjct: 133 LKLKNEKKARPLLIAADVYRPAAIDQLVQVGEQIDVPVYQEGTDVSPVEIVRHGLEQAAE 192
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M EL D+K + +P E+LLVVDAMTGQ A FN ++
Sbjct: 193 NKNDYVFIDTAGRLQIDEKLMQELADIKDLAHPDEILLVVDAMTGQNAVNTAEGFNDKLD 252
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L
Sbjct: 253 VTGVILTKLDGDTRGGAALSIRAVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDML 312
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EK Q+ ++ A EM +KI FDFNDFL Q V MG + ++ MIPGM P
Sbjct: 313 TLIEKTQKEFDEKQAAEMSQKIRENTFDFNDFLDQMNQVQSMGPIEDIVKMIPGMAN-NP 371
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++ +A++ +MT +ERE P++L +P RR+R+A SG+ +V++++ Q
Sbjct: 372 ALKNINVDPKDIEHTKAIVYSMTKQERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQ 429
Query: 502 LFQMRVRMKNL----MGVMEG 518
QM+ M + G MEG
Sbjct: 430 FNQMKKMMNQMSKGNFGPMEG 450
>gi|340749889|ref|ZP_08686736.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
gi|229419531|gb|EEO34578.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
Length = 449
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/441 (47%), Positives = 308/441 (69%), Gaps = 8/441 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L S + + K++G L++ NI + +++++ +LLEADV+ VV+ F + E+A+
Sbjct: 1 MLDNLGSRFQEIFKKVRGHGKLSESNIKDALKEVKMSLLEADVNYKVVKDFTAKIQEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++G+ P QQ +KIV DELV+L+GG + L PTV++LAGLQG GKTT +AKL
Sbjct: 61 GTDVLKGINPGQQFIKIVNDELVELLGGTNARLTKGVRNPTVLMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYLKKQG+ ++V DVYRPAAI QL +LGEQ G+ VY+ I ++GL +AK+
Sbjct: 121 GNYLKKQGEKVLMVGADVYRPAAIKQLQVLGEQTGIEVYSEENHQDAVGICERGLAKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+I+DTAGRL ID+ +MDELK++KR+ P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 LGSTYMIIDTAGRLHIDEKLMDELKEIKRLTRPQEILLVVDAMIGQDAVNLAESFNNVLN 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V GKPIK VG GE+++D+E F+P+R+ RILGMGDV+
Sbjct: 241 IDGVVLTKLDGDTRGGAALSIKAVVGKPIKFVGVGEKIDDIELFHPERLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ + +EDA+ +++KI + FD +DFLKQ + + ++GS+ ++ MIPGMG+I
Sbjct: 301 SLVEKAQSAIDEEDAKSLEEKIRTQKFDLDDFLKQLQNIKKLGSLGSILKMIPGMGQI-- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KPE+L S R++R+A+ SG +++L+ Q
Sbjct: 359 GDLAPAEKEMKKVEAIIQSMTKEERKKPEILKAS--RKQRIAKGSGTEVADINRLLKQFE 416
Query: 504 QMRVRMKNLMGVMEGGSLPAL 524
QM+ MK + GG +P+L
Sbjct: 417 QMKAMMK----MFSGGKIPSL 433
>gi|340754117|ref|ZP_08690884.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|358465943|ref|ZP_09175824.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|422317421|ref|ZP_16398777.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
gi|229423656|gb|EEO38703.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|357069550|gb|EHI79447.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|404589799|gb|EKA92378.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
Length = 444
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L+ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSDSNIKDALREVKMSLLEADVNYKVVKDFTNRISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMNELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTIEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK NL G+ +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNLGGMGKGGKFP 443
>gi|421527575|ref|ZP_15974173.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
gi|402256254|gb|EJU06738.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
Length = 444
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/447 (48%), Positives = 311/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSESNIKDALREVKMSLLEADVNYKVVKDFTNRISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGKQIGVDVYSEEDNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+V+ P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMEELKELKKVIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMKNL-------MGVM-EGGSLP 522
QM+ MK MG M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|409196181|ref|ZP_11224844.1| signal recognition particle protein [Marinilabilia salmonicolor JCM
21150]
Length = 443
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/428 (50%), Positives = 300/428 (70%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKG+ T+T+ N+ E ++DIRRALL+ADV+ + F + V ++A+
Sbjct: 1 MFENLSERLERSFKILKGQGTITEVNVAETLKDIRRALLDADVNFKTAKSFTETVKDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGG +++ K P VIL++GLQG GKTT + KL
Sbjct: 61 GQNVLNAVKPQQMMVKIVHDELADLMGGSSTDIEL-KGNPAVILISGLQGSGKTTFTGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN +K K+GK +LVAGDVYRPAAI+QL +LGEQ+GVPVYT P ++AK G++EAK
Sbjct: 120 ANLIKSKRGKQPLLVAGDVYRPAAINQLQVLGEQIGVPVYTEEGNTDPVKLAKDGIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL ID+ MM+E+ +K+ +NP E L VVD+MTGQ+A FN +
Sbjct: 180 SKGHDVVIIDTAGRLAIDEEMMNEISAIKKAVNPHETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KPIK VG GE+M+ L+ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAAISIRSVVDKPIKFVGMGEKMDALDVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE E+A+++QKKI F+F+DFL Q + + +MG++ + MIPGMGK+
Sbjct: 300 VSLVEKAQEQYDSEEAQKLQKKIAKNQFNFDDFLSQIKQIKKMGNLKDLAAMIPGMGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTPEER++P L+ S RRKR+A SG + Q+V++L+ Q
Sbjct: 360 K-NVDIDDDAFKGVEAIISSMTPEERQQPTLINGS--RRKRIATGSGTSIQEVNRLMKQF 416
Query: 503 FQMRVRMK 510
R M+
Sbjct: 417 EDTRKAMR 424
>gi|260495487|ref|ZP_05815613.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
gi|260197024|gb|EEW94545.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
Length = 443
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/446 (48%), Positives = 311/446 (69%), Gaps = 11/446 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFD 416
Query: 504 QMRVRMKNL------MGVM-EGGSLP 522
QM+ MK MG+M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|385840301|ref|YP_005863625.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|417810407|ref|ZP_12457086.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
gi|300214422|gb|ADJ78838.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|335349203|gb|EGM50703.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
Length = 479
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 304/431 (70%), Gaps = 6/431 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +A+G
Sbjct: 3 FEGLTERLQNAIGKLRRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKTVRSRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +ELVK+MG E + L + PT+I++ GLQG GKTT ++KLA
Sbjct: 63 AEVLESLTPAQQIVKIVNEELVKVMGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + ++A DVYRPAAIDQL ILG+ + VPV++ G +V P +I +QGLEEAK
Sbjct: 123 NKLKKEKNARPFMIAADVYRPAAIDQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRLQID+ +M EL +K + P E+LL VDAMTGQ A + FN ++
Sbjct: 183 KKNDYVIIDTAGRLQIDEKLMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ +K+ NFDFNDFL Q V MG M +I MIPGM P
Sbjct: 303 TLIEKAQQEYDQKQAEELAEKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ K ++ +A++ +MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q
Sbjct: 362 ALKNLKVDPKDIEHTKAIVYSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNL 512
QM+ MK +
Sbjct: 420 FKQMQDMMKKM 430
>gi|172057910|ref|YP_001814370.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
gi|171990431|gb|ACB61353.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
Length = 450
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/436 (49%), Positives = 310/436 (71%), Gaps = 6/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A+ K++G+ +++ ++ E MR++R ALLEADV+ VV++FV V E+AVG
Sbjct: 3 FEGLSERLQASLAKMRGKGKISEADVKEMMREVRLALLEADVNFKVVKQFVNDVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV DEL KLMG EVS L + PTVI++ GLQG GKTT KLA
Sbjct: 63 QDVMTSLTPGQQVVKIVHDELTKLMGSEVSPLTLSNRPPTVIMMTGLQGAGKTTTVGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KKQ +S +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +I L+ AK+
Sbjct: 123 NHLRKKQNRSPLLVAADIYRPAAIKQLETLGKQLELPVFSMGDQVSPQEIVTNALDYAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+V++DTAGRL ID+ +M EL DVK + P E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 HHHDIVLIDTAGRLHIDEDLMQELVDVKEIAKPNEIFLVVDSMTGQDAVNVAQSFNEKLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+G PIK VG GE+++ +EPFYP+RMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIKAVTGAPIKFVGLGEKLDAIEPFYPERMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA+ M A+E++ K+ A+F F+DF++Q + V +MG + ++GMIPG GK
Sbjct: 303 TLIEKAESQMDATRAKELEGKMRDASFTFDDFIEQLQQVKQMGPLDELLGMIPGAGKGKM 362
Query: 444 AQVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
++ A EK L +EA+I++MT ER +PE+L S RRKR+A+ SG++ Q+V++L+
Sbjct: 363 KGLKNAQIDEKQLVYVEAIIQSMTKRERTEPEILNAS--RRKRIARGSGRSIQEVNRLIK 420
Query: 501 QLFQMRVRMKNLMGVM 516
Q MR MK G M
Sbjct: 421 QFEDMRKMMKQFSGQM 436
>gi|317133004|ref|YP_004092318.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
gi|315470983|gb|ADU27587.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
Length = 443
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 306/431 (70%), Gaps = 4/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L AA+ +L+ + LT+ ++ + MR++R ALLEADV+ + ++FV V+E+A+G
Sbjct: 3 FEGLSEKLSAAFKRLRSKGKLTEADVRQAMREVRLALLEADVNYKIAKQFVNDVTERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMGGE S + +A PTVILL GLQG GKTT +AKLA
Sbjct: 63 SAVLESLTPAQQVIKIVNEELTALMGGEQSRIRYASKPPTVILLCGLQGSGKTTHAAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+KKQGK +L A DVYRPAAI QL ++GE+ GVPV+ G + P +IAK L AK
Sbjct: 123 LSMKKQGKRPLLAACDVYRPAAIKQLQVVGEKAGVPVFEQG-QGDPVKIAKAALHHAKDH 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
DV+I+DTAGRL +D+A+MDELK +K + P E+LLVVDAMTGQ+A + ++FN +GI
Sbjct: 182 GSDVLILDTAGRLHVDEALMDELKRIKAAVEPDEILLVVDAMTGQDAVNVASSFNEVLGI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALSV+ V+GKPIK G GE+++DLEPF+P+RMA RILGMGD+L+
Sbjct: 242 DGVILTKLDGDTRGGAALSVRAVTGKPIKFAGTGEKLDDLEPFHPERMASRILGMGDMLT 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITP 443
+EKA++ + Q+ A EM KK+ DFNDFL+ R + +MGS+S V+ M+PG+ GK++
Sbjct: 302 LIEKAEQEVDQKKAAEMAKKLKHNAIDFNDFLESIRQMKKMGSLSSVMNMLPGVRGKVSE 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q+ + E +K EA+I +MT ERE+PE + +P R++R+A SG + V++L+
Sbjct: 362 EQMDKGEIEMKRTEAIITSMTAYERERPESI--NPSRKRRIASGSGTKVEDVNRLLRNFE 419
Query: 504 QMRVRMKNLMG 514
Q R MK + G
Sbjct: 420 QTRKMMKQMGG 430
>gi|315917604|ref|ZP_07913844.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|313691479|gb|EFS28314.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 449
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 314/444 (70%), Gaps = 8/444 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L S + + K++G L++ NI + +++++ +LLEADV+ VV+ F++++ E+A+
Sbjct: 1 MLDNLGSRFQDIFKKVRGHGKLSESNIKDALKEVKMSLLEADVNYKVVKDFIESIREKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++G+ P QQ +K+V DELV+L+GG + L A PTV++L+GLQG GKTT + KL
Sbjct: 61 GTEVLKGINPGQQFIKLVNDELVQLLGGTNARLTKAPKNPTVLMLSGLQGAGKTTFAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LVA DVYRPAAI QL +LG+QV V VY I ++ LE+AK+
Sbjct: 121 AKFLKKQNEKVLLVAADVYRPAAIKQLQVLGQQVDVAVYAEEGHQDVLGICERALEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ +I+DTAGRL ID+A+M+EL+++KR+ P E+LLVVD+M GQ+A L +FN +
Sbjct: 181 EHATYMIIDTAGRLHIDEALMEELRNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNESLS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+
Sbjct: 241 IDGVVLTKLDGDTRGGAALSIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ +++EDA+ +++KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I
Sbjct: 301 SLVEKAQSAIEEEDAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI-- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT +ER+KPE+L S R++R+A+ SG +++L+ Q
Sbjct: 359 GDLAPAEKEMKKVEAIIQSMTKQERKKPEILKAS--RKQRIAKGSGTDVADINRLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNL 527
QM+ MK + GG +P NL
Sbjct: 417 QMKTMMK----MFAGGKMPNFPNL 436
>gi|90961606|ref|YP_535522.1| signal recognition particle protein [Lactobacillus salivarius
UCC118]
gi|90820800|gb|ABD99439.1| Signal recognition particle protein [Lactobacillus salivarius
UCC118]
Length = 482
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 304/431 (70%), Gaps = 6/431 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +A+G
Sbjct: 6 FEGLTERLQNAIGKLRRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKTVRSRAIG 65
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +ELVK+MG E + L + PT+I++ GLQG GKTT ++KLA
Sbjct: 66 AEVLESLTPAQQIVKIVNEELVKVMGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLA 125
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + ++A DVYRPAAIDQL ILG+ + VPV++ G +V P +I +QGLEEAK
Sbjct: 126 NKLKKEKNARPFMIAADVYRPAAIDQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKD 185
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRLQID+ +M EL +K + P E+LL VDAMTGQ A + FN ++
Sbjct: 186 KKNDYVIIDTAGRLQIDEKLMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLD 245
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L
Sbjct: 246 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDML 305
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ +K+ NFDFNDFL Q V MG M +I MIPGM P
Sbjct: 306 TLIEKAQQEYDQKQAEELAEKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NP 364
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ K ++ +A++ +MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q
Sbjct: 365 ALKNLKVDPKDIEHTKAIVYSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQ 422
Query: 502 LFQMRVRMKNL 512
QM+ MK +
Sbjct: 423 FKQMQDMMKKM 433
>gi|19704725|ref|NP_604287.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296328503|ref|ZP_06871023.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19715045|gb|AAL95586.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296154409|gb|EFG95207.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 444
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/441 (48%), Positives = 309/441 (70%), Gaps = 8/441 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNRISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +MDELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMDELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSLPAL 524
Q MK++M + G +P +
Sbjct: 417 Q----MKSMMKMFSSGKMPNI 433
>gi|452995947|emb|CCQ92348.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/429 (49%), Positives = 313/429 (72%), Gaps = 5/429 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A+ +L+G+ +T+ ++ E MR++R ALLEADV+ VV+ + V E+AVG
Sbjct: 3 FESLTNRLQEAFRRLRGKGKVTEADVNEAMREVRLALLEADVNFKVVKDLIARVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ +++ + P QQ++K+V +EL LMGGE + L K P VI++ GLQG GKTT + KLA
Sbjct: 63 IEVLKTLNPAQQVIKVVNEELTALMGGEAARLELGKKPPAVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LKKQ GK +LVA DVYRPAAI QL +LGE +G+PV++ GTEV P +IA+QGLE+A++
Sbjct: 123 LHLKKQQGKRSLLVACDVYRPAAIKQLQVLGESIGLPVFSMGTEVSPVEIARQGLEKARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++DVVI+DTAGRL +D+ +M ELK++K ++P E+LLVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDVVIIDTAGRLHVDERLMVELKEIKAQVHPQEILLVVDAMTGQDAVTVAESFHQQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALSVK V+G PIK GE++E LEPFYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSVKAVTGCPIKFAAMGEKLEALEPFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + E A+E+++K+ A F DFL+Q V ++G + ++ MIPGM ++
Sbjct: 303 TLIEKAQAEVDAEKAKELERKLRKAEFTLEDFLEQMEQVRKLGPLEDLLAMIPGMNRLKD 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ EK + +EA+I++MT +E++ P+++ S RRKR+AQ SG + +V++L+ Q
Sbjct: 363 LKI--DEKQIAHVEAIIKSMTRQEKQNPQIINYS--RRKRIAQGSGTSLTEVNRLLKQFE 418
Query: 504 QMRVRMKNL 512
+ + MK L
Sbjct: 419 ETKKMMKQL 427
>gi|407477591|ref|YP_006791468.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
gi|407061670|gb|AFS70860.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
Length = 450
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 311/436 (71%), Gaps = 6/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A+ K++G+ +++ ++ E MR++R ALLEADV+ VV++FV V E+AVG
Sbjct: 3 FEGLSERLQASLAKMRGKGKISEADVKEMMREVRLALLEADVNFKVVKQFVNDVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV DEL KLMG EVS L + PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMTSLTPGQQVVKIVHDELTKLMGSEVSPLTLSNRPPTVIMMTGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KKQ +S +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +I L+ AK+
Sbjct: 123 NHLRKKQNRSPLLVAADIYRPAAIKQLETLGKQLELPVFSMGDQVSPQEIVTGALDYAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+V++DTAGRL ID+ +M EL DVK + P E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 HHHDIVLIDTAGRLHIDEDLMQELVDVKEIAKPNEIFLVVDSMTGQDAVNVAESFNEKLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS+K V+G PIK VG GE+++ +EPFYP+RMA RILGMGD+L
Sbjct: 243 VTGVILTKLDGDTRGGAALSIKAVTGAPIKFVGLGEKLDAIEPFYPERMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA+ M A+E++ K+ A+F F+DF++Q + V +MG + ++GMIPG GK
Sbjct: 303 TLIEKAEFQMDATRAKELEGKMRDASFTFDDFIEQLQQVKQMGPLDELLGMIPGAGKGKM 362
Query: 444 AQVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
++ A EK L +EA+I++MT ER +PE+L S RRKR+A+ SG++ Q+V++L+
Sbjct: 363 KGLKNAQIDEKQLVYVEAIIQSMTKRERTEPEILNAS--RRKRIARGSGRSIQEVNRLIK 420
Query: 501 QLFQMRVRMKNLMGVM 516
Q MR MK G M
Sbjct: 421 QFEDMRKMMKQFSGQM 436
>gi|317059129|ref|ZP_07923614.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
gi|313684805|gb|EFS21640.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
Length = 449
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 314/444 (70%), Gaps = 8/444 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L S + + K++G L++ NI + +++++ +LLEADV+ VV+ F++++ E+A+
Sbjct: 1 MLDNLGSRFQDIFKKVRGHGKLSESNIKDALKEVKMSLLEADVNYKVVKDFIESIREKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++G+ P QQ +K+V DELV+L+GG + L A PTV++L+GLQG GKTT + KL
Sbjct: 61 GTEVLKGINPGQQFIKLVNDELVQLLGGTNARLTKAPKNPTVLMLSGLQGAGKTTFAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LVA DVYRPAAI QL +LG+QV V VY I ++ LE+AK+
Sbjct: 121 AKFLKKQNEKVLLVAADVYRPAAIKQLQVLGQQVDVAVYAEEGHQDVLGICERALEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ +I+DTAGRL ID+A+M+EL+++KR+ P E+LLVVD+M GQ+A L +FN +
Sbjct: 181 EHATYMIIDTAGRLHIDEALMEELRNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNESLS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+
Sbjct: 241 IDGVVLTKLDGDTRGGAALSIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ +++EDA+ +++KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I
Sbjct: 301 SLVEKAQSAIEEEDAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI-- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT +ER+KPE+L S R++R+A+ SG +++L+ Q
Sbjct: 359 GDLAPAEKEMKKVEAIIQSMTKQERKKPEILKAS--RKQRIARGSGTDVADINRLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNL 527
QM+ MK + GG +P NL
Sbjct: 417 QMKTMMK----MFAGGKMPNFPNL 436
>gi|289764649|ref|ZP_06524027.1| signal recognition particle [Fusobacterium sp. D11]
gi|289716204|gb|EFD80216.1| signal recognition particle [Fusobacterium sp. D11]
Length = 444
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFD 416
Query: 504 QMRVRMKNL-------MGVM-EGGSLP 522
QM+ MK MG M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|402308286|ref|ZP_10827295.1| signal recognition particle protein [Prevotella sp. MSX73]
gi|400375730|gb|EJP28625.1| signal recognition particle protein [Prevotella sp. MSX73]
Length = 447
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/432 (50%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E M+D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETMKDVRRALLDADVNFKVAKNFTNTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VK+V DEL +LMGGE + LV K+RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKLVHDELAELMGGEDAPLVL-KNRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGVPVY IA L+EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVPVYAEPDNKDVIAIAANALKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
KN DVVI+DTAGRL +D+ MM E+ ++K+ +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKNYDVVIIDTAGRLAVDEQMMTEISNLKQAVNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +E++I++MTP+ER PE+L S RR+R+A+ SG Q V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIESIIKSMTPKERSNPEILNSS--RRQRIAKGSGTNIQDVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|422340385|ref|ZP_16421333.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355369069|gb|EHG16473.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 444
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSESNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLEVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMKNL-------MGVM-EGGSLP 522
QM+ MK MG M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|328957317|ref|YP_004374703.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
gi|328673641|gb|AEB29687.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
Length = 475
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 316/445 (71%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A K++ + +++ ++ E MR++R ALLEADV+ VV+ FV+ VS +AVG
Sbjct: 3 FEGLTERLQNAMTKMRRKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKTVSARAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL +LMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SEVLDSLSPGQQVIKIVNEELTELMGGEQATIQTSPKAPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+YL+K Q K +L+A D+YRPAAI QL +G+Q+ VPV++ G +V P +IA+QG+E+AK
Sbjct: 123 SYLRKNQNKRPLLIAADIYRPAAIQQLETIGKQLDVPVFSMGDQVSPVEIARQGIEKAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D V++DTAGRLQID+ +M EL D+K PTE+ LVVDAMTGQEAA + ++FN ++
Sbjct: 183 EHLDFVLIDTAGRLQIDETLMQELSDIKETSQPTEIFLVVDAMTGQEAANVASSFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK G GE+++ LEPFYP+RMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTGKPIKFTGSGEKLDALEPFYPERMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE ++ +EEM K+ +FDFNDF++Q V+ MG M ++ MIPGM +
Sbjct: 303 TLIEKAQEDFDEKKSEEMMTKLRENSFDFNDFIEQMDQVSNMGPMEDILKMIPGMSNVPG 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K M+A++ +MTP+ERE P+LL++S RR+R+A+ S + +V++L+ Q
Sbjct: 363 LDKLQIDPKDTARMKAIVLSMTPQERENPDLLSQS--RRRRIARGSARPIAEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
+ K +M M G++ + NL
Sbjct: 421 NE----SKKMMSQMSKGNMNGMENL 441
>gi|227890693|ref|ZP_04008498.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
gi|227867631|gb|EEJ75052.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
Length = 482
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/446 (49%), Positives = 309/446 (69%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +A+G
Sbjct: 6 FEGLTERLQNAIGKLRRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKTVRSRAIG 65
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +ELVK+MG E + L + PT+I++ GLQG GKTT ++KLA
Sbjct: 66 AEVLESLTPAQQIVKIVNEELVKVMGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLA 125
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + ++A DVYRPAAIDQL ILG+ + VPV++ G +V P +I +QGLEEAK
Sbjct: 126 NKLKKEKNARPFMIAADVYRPAAIDQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKD 185
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRLQID+ +M EL +K + P E+LL VDAMTGQ A + FN ++
Sbjct: 186 KKNDYVIIDTAGRLQIDEKLMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLD 245
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L
Sbjct: 246 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDML 305
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ +K+ NFDFNDFL Q V MG M +I MIPGM P
Sbjct: 306 TLIEKAQQEYDQKQAEELAEKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NP 364
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ K ++ +A++ +MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q
Sbjct: 365 ALKNLKVDPKDIEHTKAIVYSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQ 422
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q M+++M M G+ + L
Sbjct: 423 FKQ----MQDMMKKMSNGNFSGMEGL 444
>gi|417788149|ref|ZP_12435832.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
gi|334308326|gb|EGL99312.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
Length = 479
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 304/431 (70%), Gaps = 6/431 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +A+G
Sbjct: 3 FEGLTERLQNAIGKLRRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKTVRSRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +ELVK+MG E + L + PT+I++ GLQG GKTT ++KLA
Sbjct: 63 AEVLESLTPAQQIVKIVNEELVKVMGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + ++A DVYRPAAIDQL ILG+ + VPV++ G +V P +I +QGLEEAK
Sbjct: 123 NKLKKEKNARPFMIAADVYRPAAIDQLKILGKDIDVPVFSLGVDVDPVEIVRQGLEEAKD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRLQID+ +M EL +K + P E+LL VDAMTGQ A + FN ++
Sbjct: 183 KKNDYVIIDTAGRLQIDEKLMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ +K+ NFDFNDFL Q V MG M +I MIPGM P
Sbjct: 303 TLIEKAQQEYDQKQAEELAEKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ K ++ +A++ +MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q
Sbjct: 362 ALKNLKVDPKDIEHTKAIVYSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNL 512
QM+ MK +
Sbjct: 420 FKQMQDMMKKM 430
>gi|398814569|ref|ZP_10573250.1| signal recognition particle protein [Brevibacillus sp. BC25]
gi|398036838|gb|EJL30047.1| signal recognition particle protein [Brevibacillus sp. BC25]
Length = 470
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/430 (48%), Positives = 305/430 (70%), Gaps = 3/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L + L+ A++KL+G + + + E MR++R ALLEADV+ VV+ FV V E+AVG
Sbjct: 3 FESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q ++KIV +ELV LMGG V++L A PTVI++AGLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
YL+KQ + +LVAGD+YRPAAI QL +LG+Q+ VPV+T G +V P +IA+Q +E AK
Sbjct: 123 KYLQKQNRKPLLVAGDIYRPAAIKQLQVLGDQLNVPVFTLGDQVSPVEIARQAIEHAKTN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++DVV++DTAGRL ID+A+MDELK ++ V P E+LLVVD+MTGQ+A + +FN ++ +
Sbjct: 183 HLDVVLIDTAGRLHIDEALMDELKQIREVTKPDEILLVVDSMTGQDAVNVAESFNSQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A +M++++ F F+ FL + + +G ++GM+PGM K+
Sbjct: 303 LIEKAQASVDEDKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-G 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
++ EK + +EA+ ++MT +ER P+LL + RRKR+A SG + Q+V++ + Q +
Sbjct: 362 KMNVDEKQIARVEAIAKSMTKQERANPDLLNAN--RRKRIASGSGTSIQEVNRFLKQFEE 419
Query: 505 MRVRMKNLMG 514
M+ MK G
Sbjct: 420 MKKMMKQFSG 429
>gi|315607956|ref|ZP_07882949.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
gi|315250425|gb|EFU30421.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
Length = 447
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/432 (50%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E M+D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETMKDVRRALLDADVNFKVAKNFTNTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VK+V DEL +LMGGE + LV K+RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKLVHDELAELMGGEDAPLVL-KNRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGVPVY IA L+EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVPVYAEPDNKDVIAIAANALKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
KN DVVI+DTAGRL +D+ MM E+ ++K+ +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKNYDVVIIDTAGRLAVDEQMMTEISNLKQAVNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +E++I++MTP+ER PE+L S RR+R+A+ SG Q V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIESIIKSMTPKERSNPEILNSS--RRQRIAKGSGMNIQDVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|336419495|ref|ZP_08599757.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
gi|336163626|gb|EGN66544.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
Length = 443
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 311/446 (69%), Gaps = 11/446 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +++ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVNETLMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFD 416
Query: 504 QMRVRMKNL------MGVM-EGGSLP 522
QM+ MK MG+M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|423138302|ref|ZP_17125945.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371958340|gb|EHO76059.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 443
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 311/446 (69%), Gaps = 11/446 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFD 416
Query: 504 QMRVRMKNL------MGVM-EGGSLP 522
QM+ MK MG+M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|254304380|ref|ZP_04971738.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324572|gb|EDK89822.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 444
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSESNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLEVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDETLMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK N+ + +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|229918605|ref|YP_002887251.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
gi|229470034|gb|ACQ71806.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
Length = 446
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/436 (48%), Positives = 312/436 (71%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++ +K++G+ +++ ++ E MR++R ALLEADV+ VV++FV V E+AVG
Sbjct: 3 FEGLSERLQSTLSKMRGKGKISETDVKEMMREVRLALLEADVNFKVVKQFVNDVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV +EL LMG +V + F++ PTV+++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVVKIVHEELSNLMGSDVVPITFSQKPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N + KK +S +LVA D+YRPAAI QL LG+Q+ +PV++ G +VKP +I + LE AK
Sbjct: 123 NLIRKKHNRSPLLVAADIYRPAAIKQLETLGKQLDLPVFSLGDQVKPEEIVTKALEYAKT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +M EL++VK + P E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 NHHDFVLIDTAGRLHIDETLMGELENVKTIAKPNEIFLVVDSMTGQDAVNVADSFNEKLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS+K V+G PIK VG GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIKAVTGAPIKFVGLGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+ M Q+ A+E++ KI A+F F+DF++Q V MG + ++ M+PG GK+
Sbjct: 303 SLIEKAETQMDQDAAKELESKIRDASFTFDDFIEQLAQVKNMGPIDELLSMLPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I +MT ER PE+L S RRKR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LKNVQIDEKQLDHVEAIIRSMTKHERANPEVLNAS--RRKRIAKGSGRSIQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
M+ MK + G M+G
Sbjct: 421 DDMKKMMKQMSGQMKG 436
>gi|403234825|ref|ZP_10913411.1| signal recognition particle protein [Bacillus sp. 10403023]
Length = 446
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/436 (48%), Positives = 315/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQGTLQKIRGKGKVSESDVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVQEELTALMGGEQSKIAVAKRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAIDQL LG+Q+ +PV++ G ++ P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPLLVAADIYRPAAIDQLQTLGKQLNMPVFSLGDKISPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +MDELK VK V P E+ LVVDAMTGQ+A + +FN +G
Sbjct: 183 EHHDYVLIDTAGRLHIDEELMDELKQVKEVAQPDEIFLVVDAMTGQDAVNVAQSFNDLLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALSVK V+ PIK VG GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSVKAVTNTPIKFVGLGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + ++ A+E++KK S +F F+DFL+Q V +MG + ++GM+PG K+
Sbjct: 303 SLIEKAQASVDEDKAKELEKKFKSMSFTFDDFLEQLAQVRKMGPLDEILGMLPGANKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ +K + +EA+I +MT ERE+PE++ S R+KR+A+ SG+T Q+V++L+ Q
Sbjct: 363 LKNVQVDDKQIGHVEAIIRSMTKAEREQPEIINSS--RKKRIAKGSGRTVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
M+ MK + + +G
Sbjct: 421 EDMKKMMKQMTNMTKG 436
>gi|392989044|ref|YP_006487637.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
gi|392336464|gb|AFM70746.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
Length = 472
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/430 (50%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KL+ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+A+G
Sbjct: 3 FENLTERLQQAMSKLRKKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL +G E EL + PTVI++AGLQG GKTT + KLA
Sbjct: 63 VEVLESLTPAQQIVKIVDEELTITLGAETVELNKSPKIPTVIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYLKK + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+V P +I +QG+E AK+
Sbjct: 123 NYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTDVSPVEIVRQGMELAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+ +MDELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDETLMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ KK+ +FDFNDF++Q V MG + +I MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAKKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K ++ +AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVERKKAMVYSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KESRKMMQQM 430
>gi|422933064|ref|ZP_16965988.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339891771|gb|EGQ80711.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 443
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 311/446 (69%), Gaps = 11/446 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEENSEDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDEILMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFD 416
Query: 504 QMRVRMKNL------MGVM-EGGSLP 522
QM+ MK MG+M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|237745294|ref|ZP_04575775.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
gi|229432523|gb|EEO42735.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
Length = 444
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/447 (48%), Positives = 309/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRGV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEENSKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL +D+ +M+ELK++K+ + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHVDEILMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+ GGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTHGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFD 416
Query: 504 QMRVRMKNL-------MGVM-EGGSLP 522
QM+ MK MG M +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|418961237|ref|ZP_13513124.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
gi|380344904|gb|EIA33250.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
Length = 479
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/446 (48%), Positives = 309/446 (69%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +A+G
Sbjct: 3 FEGLTERLQNAIGKLRRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKTVRSRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +ELV++MG E + L + PT+I++ GLQG GKTT ++KLA
Sbjct: 63 AEVLESLTPAQQIVKIVNEELVRVMGEEAAPLNKSAKIPTIIMMVGLQGAGKTTTASKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + ++A DVYRPAAIDQL ILG+ + VPV++ G +V P +I +QGLEEAK
Sbjct: 123 NKLKKEKNARPFMIAADVYRPAAIDQLKILGKDIDVPVFSLGIDVDPVEIVRQGLEEAKD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRLQID+ +M EL +K + P E+LL VDAMTGQ A + FN ++
Sbjct: 183 KKNDYVIIDTAGRLQIDEKLMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ +K+ NFDFNDFL Q V MG M +I MIPGM P
Sbjct: 303 TLIEKAQQEYDQKQAEELAEKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ K ++ +A++ +MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q
Sbjct: 362 ALKNLKVDPKDIEHTKAIVYSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q M+++M M G+ + L
Sbjct: 420 FKQ----MQDMMKKMSNGNFSGMEGL 441
>gi|237741085|ref|ZP_04571566.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256846224|ref|ZP_05551681.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
gi|229430617|gb|EEO40829.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256717993|gb|EEU31549.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
Length = 444
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGRLSESNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRG+ P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGINPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL ID+ +M+ELK++KR + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHIDETLMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK N+ + +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|323141933|ref|ZP_08076793.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413600|gb|EFY04459.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
Length = 448
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/434 (49%), Positives = 305/434 (70%), Gaps = 6/434 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A +G LT+E++ PMR++R ALLEADV+ VV+ FV V E+AVG
Sbjct: 3 FESLSERLQNALKMFRGNGKLTEEDLKAPMREVRMALLEADVNFKVVKDFVAKVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ G+ P QQ++KIV +EL++L+GG S+L A PTVI+L GLQG GKTT + KLA
Sbjct: 63 EAIGEGLNPHQQIIKIVNEELIELLGGTQSKLTVAPKPPTVIMLVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYLK++ K +LVAGDVYRPAAI QL +LGEQ+ VPV+T G +V P +IA++ +E+A
Sbjct: 123 NYLKRKHKKPLLVAGDVYRPAAITQLQVLGEQLNVPVFTLGDKVSPVEIAQKAMEKAHSL 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL I++ +M+EL+++K ++P E+LLVVDAMTGQ+A + +F+ E+GI
Sbjct: 183 ACDTVIIDTAGRLHINEELMEELRNIKGAVHPQEILLVVDAMTGQDAVTVAESFDKELGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G I+TKLDGD+RGGA LSVK V+GKP+KL+G GE+++ LEPF+PDRMA RILGMGD+L+
Sbjct: 243 DGLIVTKLDGDARGGAVLSVKAVTGKPVKLIGLGEKLDALEPFHPDRMASRILGMGDILT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
VEK Q A EM+KK+ F FL Q + V ++GS+ ++G+IPGMG I+
Sbjct: 303 LVEKIQSTTDLAKALEMEKKLRKDEFTLEQFLDQMQQVKKLGSLETILGLIPGMGGIS-Q 361
Query: 445 QVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+++EA EK +EA+I +MT +ER+KPE++ S RRKR+A G Q V++L+
Sbjct: 362 KLKEANVDEKEFDRIEAIIRSMTKKERQKPEIINGS--RRKRIAAGCGMRVQDVNKLLKN 419
Query: 502 LFQMRVRMKNLMGV 515
+ + MK + G+
Sbjct: 420 FEESKKMMKRMQGM 433
>gi|304316926|ref|YP_003852071.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778428|gb|ADL68987.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 446
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/428 (48%), Positives = 301/428 (70%), Gaps = 2/428 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + KL+G+ L+++++ E M++++ ALLEADV+ VV+ F+ V+E+++G
Sbjct: 3 FESLTGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P Q ++KIV DEL LMG + S++ F+ PT+I++ GLQG GKTT S KLA
Sbjct: 63 QEVMESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTIIMMVGLQGSGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYLK +GK+ +LVA D+YRPAAI QL ++G + VPV++ G + P IAK ++ AK
Sbjct: 123 NYLKSKGKNPVLVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTTPVDIAKGAVDFAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N +VVI+DTAGRL ID+ +MDELK++K +NP E+LLVVDAMTGQ+ + +FN ++ I
Sbjct: 183 NYNVVIIDTAGRLHIDEELMDELKNIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALSVK V+ KPIK + GE++ D+E F+PDRMA RILGMGDVLS
Sbjct: 243 DGVILTKLDGDTRGGAALSVKAVTHKPIKFIASGEKLTDIEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A E+QKKI+ F F+DFL+Q + + MG + ++ MIPG+
Sbjct: 303 LIEKAQSQIDEKKALELQKKILEQQFSFDDFLEQLQGLKNMGPIDQLFSMIPGVNMSKLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V ++K++K +EA+I++MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q
Sbjct: 363 GVNVSDKAIKRIEAIIQSMTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLIKQFEQ 420
Query: 505 MRVRMKNL 512
R MK
Sbjct: 421 TRKMMKQF 428
>gi|288800175|ref|ZP_06405634.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
gi|288333423|gb|EFC71902.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
Length = 446
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/450 (48%), Positives = 308/450 (68%), Gaps = 13/450 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNFKVAKNFTDTVKQKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE +E+ P++IL++GLQG GKTT + KL
Sbjct: 61 GMNVLTAVKPSQLMVKIVHDELAELMGGETAEVKLT-GHPSIILMSGLQGSGKTTFTGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K +LVA DVYRPAAI+QL+++GEQ+GVPVY+ +IA+ G++EAK
Sbjct: 120 ANLLKTKQNKKPLLVACDVYRPAAIEQLMVVGEQIGVPVYSEIENKNVVEIAQHGIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVV++DTAGRL ID+ MM+E+ +K + PTE L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVLIDTAGRLAIDEEMMNEISKLKESVQPTETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEAIDLFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFLKQ + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I++MTP+ER PE++ S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DLDIDDNAFKGVEAIIKSMTPKERTNPEIINTS--RRQRIAKGSGTDIQEVNRLMKQF 416
Query: 503 FQMRVRMK--------NLMGVMEGGSLPAL 524
Q R MK N+M M+G +P +
Sbjct: 417 DQTRKMMKMVTGNGMANMMSRMKGMKMPGM 446
>gi|300728157|ref|ZP_07061528.1| signal recognition particle protein [Prevotella bryantii B14]
gi|299774583|gb|EFI71204.1| signal recognition particle protein [Prevotella bryantii B14]
Length = 449
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/453 (49%), Positives = 304/453 (67%), Gaps = 19/453 (4%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E M+DIRRALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETMKDIRRALLDADVNFKVAKDFTNRVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q LVK+V DEL +LMGGE + + RP +IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVSPGQMLVKLVHDELAELMGGESVPMKL-EGRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K+ +LVA DVYRPAAIDQL ++GE VGVPVY IA L+EAK
Sbjct: 120 ANLLKAKQHKNPLLVACDVYRPAAIDQLKVVGESVGVPVYCEPENKDVLSIADHALQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K+ DVVI+DTAGRL ID+ MM E+ ++K ++P E L VVD+MTGQ+A FN +
Sbjct: 180 AKSHDVVIIDTAGRLAIDEQMMTEISNLKNHVHPDETLFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME L+ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVDKPIKFIGTGEKMEALDVFHPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+++QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKKLQKKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGK-- 357
Query: 443 PAQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+R+ E + K +EA+I++MTPEER PE+L S RRKR+A+ SG Q+V++L+
Sbjct: 358 --AIRDVEIDDNAFKGIEAIIKSMTPEERSHPEILNSS--RRKRIAKGSGTDIQEVNRLI 413
Query: 500 AQLFQMRVRMK--------NLMGVMEGGSLPAL 524
Q Q R MK ++M M+G ++P +
Sbjct: 414 KQFDQTRKMMKMVTGNKMASMMARMKGMNIPGM 446
>gi|433655070|ref|YP_007298778.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293259|gb|AGB19081.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 446
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/428 (48%), Positives = 300/428 (70%), Gaps = 2/428 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + KL+G+ L+++++ E M++++ ALLEADV+ VV+ F+ V+E+++G
Sbjct: 3 FESLTGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P Q ++KIV DEL LMG + S++ F+ PT+I++ GLQG GKTT S KLA
Sbjct: 63 QEVMESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTIIMMVGLQGSGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYLK +GK+ +LVA D+YRPAAI QL ++G + VPV++ G + P IAK ++ AK
Sbjct: 123 NYLKSKGKNPILVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTTPVDIAKGAVDFAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N +VVI+DTAGRL ID+ +MDELK++K +NP E+LLVVDAMTGQ+ + +FN ++ I
Sbjct: 183 NYNVVIIDTAGRLHIDEELMDELKNIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALSVK V+ KPIK + GE++ D+E F+PDRMA RILGMGDVLS
Sbjct: 243 DGVILTKLDGDTRGGAALSVKAVTHKPIKFIASGEKLTDIEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A E+QKKI+ F F+DFL+Q + + MG + ++ MIPG+
Sbjct: 303 LIEKAQSQIDEKKALELQKKILEQQFSFDDFLEQLQGLKNMGPIDQLFSMIPGVNMSKLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V ++K +K +EA+I++MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q
Sbjct: 363 GVNVSDKDIKRIEAIIQSMTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLIKQFEQ 420
Query: 505 MRVRMKNL 512
R MK
Sbjct: 421 TRKMMKQF 428
>gi|354584950|ref|ZP_09003841.1| signal recognition particle protein [Paenibacillus lactis 154]
gi|353191067|gb|EHB56576.1| signal recognition particle protein [Paenibacillus lactis 154]
Length = 459
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 313/447 (70%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L+ ++KL+G+ +++E++ MR++R ALLEADV+ VV+ FV V E+A+G
Sbjct: 3 FEGLTSRLQNVFSKLRGKGKVSEEDVTAAMREVRLALLEADVNFKVVKDFVAKVKEKAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG S+L + PTVI++AGLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGTQSKLAKSSKPPTVIMMAGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL +LGEQ+ VPV++ G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNSRPLLVAGDIYRPAAIKQLQVLGEQIKVPVFSLGDKTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+ELK + +NP EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 GHDYVIIDTAGRLHVDEELMEELKQIHSAVNPDEVLLVVDAMTGQDAVNVAESFNQQLTL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + E A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ A
Sbjct: 303 LIEKAQSNIDAEKAKEMERKMRNAEFTFEDFLEQMEQVKKLGPLDQLMDMIPGMGKMKQA 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK + +EA++ +MT EE+++P+++ + RRKR+A SG + +V++L+ Q
Sbjct: 363 KDLKVDEKQMGRIEAIVHSMTTEEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG AL L+
Sbjct: 421 EMRRVMKQFSDMMGPKGGKNKALKQLK 447
>gi|393201748|ref|YP_006463590.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|406664625|ref|ZP_11072400.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
gi|327441079|dbj|BAK17444.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|405387473|gb|EKB46897.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
Length = 452
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/433 (50%), Positives = 318/433 (73%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K+KG+ +T++++ E MR++R AL+EADV+L VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQGTIQKIKGKGKVTEQDVKEMMREVRFALIEADVNLKVVKEFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V +++ + P QQ++KIV+DEL LMGGE S + F+ PTVI++ GLQG GKTT + KLA
Sbjct: 63 VDVMKSLTPGQQVIKIVQDELKNLMGGEQSPIKFSNRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK K +LVA D+YRPAA++QL LG+Q+ +PV++ GT+V P +IA+Q +E AK+
Sbjct: 123 NVLRKKYNKKPLLVAADIYRPAAVEQLQTLGKQLSLPVFSLGTDVSPVEIARQAIEHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++DVV++DTAGRL ID+ +M ELKD++ + P EV LVVDAMTGQ+A + +FN +G
Sbjct: 183 EHLDVVLIDTAGRLHIDEELMQELKDIRGLKEPDEVFLVVDAMTGQDAVNVAQSFNETVG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTEKPIKFVGMGEKMDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E A+E+++K M+ +F F+DF++Q + V +MG + ++ MIPG K+
Sbjct: 303 SLIEKAQANVDMEKAKELEEKFMTQSFTFDDFIEQLQAVKKMGPLDELLKMIPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V+ EK + +EA+I +MTP E+ PE+++ S R+KR+A SG T Q+V++L+ Q
Sbjct: 363 LDNVKVDEKQMGRIEAIIYSMTPNEKTNPEIISAS--RKKRIATGSGTTIQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGV 515
+M+ MK + G+
Sbjct: 421 EEMKKMMKQMTGM 433
>gi|381183946|ref|ZP_09892631.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
gi|380316157|gb|EIA19591.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
Length = 452
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 315/430 (73%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ ++++++ E MR++R ALLEADV+ VV+ F++ VSE++VG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKNFIKTVSERSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ ++ PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTNLMGGEESKIAVSEKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KKQ + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKQNRKPLLVAADIYRPAAIKQLETLGKQLNIPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M ELK+VK V NP E+LLVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHLDYVIIDTAGRLHIDEELMGELKEVKEVTNPAEILLVVDSMTGQDAVNVAESFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK VG GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGMGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + QE EM++K+ + +DFL+Q V +MG + ++ M+PG GK+
Sbjct: 303 SLIEKAQVDVDQEKMREMERKMKENSMTLDDFLEQLGQVKQMGPLDELLKMLPGAGKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q+V++L+ Q
Sbjct: 363 LDNMQVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPIQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 NEMKKMMKQM 430
>gi|288924926|ref|ZP_06418862.1| signal recognition particle protein [Prevotella buccae D17]
gi|288338116|gb|EFC76466.1| signal recognition particle protein [Prevotella buccae D17]
Length = 447
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/432 (50%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E M+D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETMKDVRRALLDADVNFKVAKNFTNTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VK+V DEL +LMGGE + LV K+RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKLVHDELAELMGGEDAPLVL-KNRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGVPVY IA L+EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVPVYAEPDNKDVIAIAANALKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
KN DVVI+DTAGRL +D+ MM E+ ++K+ ++P E L VVD+MTGQ+A FN +
Sbjct: 180 AKNYDVVIIDTAGRLAVDEQMMTEISNLKQAVSPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +E++I++MTP+ER PE+L S RR+R+A+ SG Q V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIESIIKSMTPKERSNPEILNSS--RRQRIAKGSGTNIQDVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|374603417|ref|ZP_09676397.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
gi|374391013|gb|EHQ62355.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
Length = 457
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/433 (48%), Positives = 305/433 (70%), Gaps = 3/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L+ + KL+G+ +T++++ E MR++R ALLEADV+ VV+ F+ V E+AVG
Sbjct: 3 FEGLTSRLQNVFGKLRGKGKVTEDDVNEAMREVRLALLEADVNFKVVKEFINKVKEKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P +V IV EL +LMGG ++L A PTVI++AGLQG GKTT S KLA
Sbjct: 63 QEVMKSFTPGMVIVDIVNKELTELMGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVA D+YRPAAI QL +LG Q+ VPV++ G +V P +IA+Q +E A+
Sbjct: 123 KLLQKQNHKPLLVAADIYRPAAIKQLEVLGAQINVPVFSLGDQVSPVEIARQAMEHARAN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++D VIVDTAGRL ID+A+M+ELK + +NP EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HLDYVIVDTAGRLHIDEALMEELKQIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQLAL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-P 443
+EKAQ + + A+EM+ K+ +A F F+DFL+Q + V ++G + +++ MIPGM K+
Sbjct: 303 LIEKAQANIDADKAKEMEMKMRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGMNKMKQT 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
A ++ E+ + +EA++ +MT EER+ P+L+ S RRKR+A SG + V++L+ Q
Sbjct: 363 ANLKVDERQMGRIEAIVRSMTNEERQDPDLINHS--RRKRIAAGSGTSLADVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM 516
+MR MK +M
Sbjct: 421 EMRRMMKQFTEMM 433
>gi|323702674|ref|ZP_08114335.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333923302|ref|YP_004496882.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532337|gb|EGB22215.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333748863|gb|AEF93970.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 444
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/445 (49%), Positives = 310/445 (69%), Gaps = 8/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE + LKG+ LT++++ + MR++R ALLEADV+ VV+ FV V E+A+
Sbjct: 1 MFKGLGDRLEEIFKSLKGKGRLTEDDVNQAMREVRMALLEADVNFKVVKEFVAHVKERAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV+DEL +L+GG +++ + PT+I+L GLQG GKTT + KL
Sbjct: 61 GQDVLESLSPAQQVIKIVKDELTELLGGTQAKINLSPKPPTIIMLVGLQGAGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L KQG+ +LVAGD+YRPAAI QL +LGEQ+ +PV++ G E P +IAK +E+A
Sbjct: 121 AKLLSKQGRRPLLVAGDIYRPAAIKQLQVLGEQLNIPVFSLGQE-DPVKIAKAAVEQANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +MDEL ++K + P E+LLVVDAMTGQEA + TFN ++G
Sbjct: 180 TGRDVVIIDTAGRLHINEELMDELANIKASVKPHEILLVVDAMTGQEAVNVADTFNQKLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALSV++V+G PIK G GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 240 LDGIIMTKLDGDARGGAALSVRKVTGCPIKFAGMGEKLDALEPFHPDRMADRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ E A ++ +KI A F+ DFL+Q + V +MG + +V+ MIPGM K+T
Sbjct: 300 TLIEKAQANFDAEQAAKLNRKIRQAEFNLEDFLEQMQQVKKMGPLEQVLSMIPGMNKLT- 358
Query: 444 AQVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q+++ EK L +EA+I +MTP ER+ PE + S R+KR+A+ SG Q V+QL+
Sbjct: 359 KQLKDQQIDEKELAQVEAIIYSMTPWERQHPERIDGS--RKKRIARGSGTRVQDVNQLLK 416
Query: 501 QLFQMRVRMKNLMGVMEGG-SLPAL 524
Q Q R MK + + + G LP L
Sbjct: 417 QFEQTRKMMKQIASMTKSGRKLPKL 441
>gi|265751175|ref|ZP_06087238.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|423228545|ref|ZP_17214951.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|423243810|ref|ZP_17224886.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
gi|263238071|gb|EEZ23521.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|392635952|gb|EIY29840.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|392644176|gb|EIY37919.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
Length = 440
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/442 (49%), Positives = 301/442 (68%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGGE +ELV +SRP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTALMGGETAELVL-ESRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +LGEQ+ VPVY+ P QIA + EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLGEQIEVPVYSELDSKNPVQIALNAIHEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL ID+ MM+E++ +K+ +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAIDEQMMNEIEAIKKAINPDETLFVVDSMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PE+L + RR R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPQERTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|392394728|ref|YP_006431330.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525806|gb|AFM01537.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 453
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/429 (49%), Positives = 304/429 (70%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LK + LT+ ++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSEKLQETFKRLKSKGKLTEADVNEAMREVRMALLEADVNFKVVKDFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +E+V LMGG S++ + PT+I+L GLQG GKTT AKL
Sbjct: 61 GQEVLESLSPGQQVIKIVNEEMVALMGGVSSKINISSKPPTIIMLVGLQGAGKTTHGAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LGEQ+ VPV++ G E P +IA L+ A
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLQVLGEQIKVPVFSLGQE-NPVEIAAASLQHANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +DVVI+DTAGRL I++ +M EL+D+K + P E+LLVVDAMTGQ+A + +F+ E+G
Sbjct: 180 QGLDVVIIDTAGRLHINEELMGELRDIKASVKPHEILLVVDAMTGQDAVNVAESFHNELG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSVK V+G PIK G GE+M+ +EPF+P+RMA RILGMGDVL
Sbjct: 240 VDGIILTKLDGDTRGGAALSVKAVTGCPIKFAGIGEKMDAIEPFFPERMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE ++ A EM++K+ F +DFL Q + + +MG ++ ++ MIPG+GK
Sbjct: 300 TLIEKAQEAFDEKQAREMEQKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QM 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ EK + +EA+I +MTPEER KP L+ +S R++R+A+ SG + Q+V +L+ Q
Sbjct: 359 KDVQVDEKDMAHVEAIIHSMTPEERRKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|294786046|ref|ZP_06751331.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
gi|294486268|gb|EFG33633.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
Length = 444
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGRLSESNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+GV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIKGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL ID+ +M+ELK++KR + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHIDETLMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK N+ + +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|421146007|ref|ZP_15605809.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487592|gb|EJG08545.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 444
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 310/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGRLSESNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+GV P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIKGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL ID+ +M+ELK++KR + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHIDETLMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+
Sbjct: 241 VDGVILTKLDGDARGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK N+ + +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|392957499|ref|ZP_10323022.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
gi|391876462|gb|EIT85059.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
Length = 447
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 313/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L++ +++G+ +T+ ++ E MR++R ALLEADV+ VV+ F++ V+E+AVG
Sbjct: 3 FEGLADRLQSTLQRIRGKGKVTEADVKEMMREVRLALLEADVNFRVVKDFIKKVTERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VK+V DEL L+GGE S+L PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVLKSLTPGQQVVKVVHDELTTLLGGEQSKLAVGTKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L+K+ + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IA + LE+AK
Sbjct: 123 NHLRKKLNRQPLLVAADIYRPAAIQQLETLGKQLSLPVFSMGDQVSPVEIATKALEKAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID+ +M+EL+ VK + NP E+LLVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVIIDTAGRLHIDEVLMEELQQVKEIANPHEILLVVDSMTGQDAVNVAESFNEKLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+M+ LEPF+PDRM+ RILGMGDVL
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIKAVTNLPIKFAGMGEKMDALEPFHPDRMSSRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+QKK+ +F F+DFL+Q V +G + +++GM+PG GK+
Sbjct: 303 TLIEKAQTTVDEEKAKELQKKMRDMSFTFDDFLEQMGQVRNLGPLDQLLGMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V EK + +EA+I++MT ERE+PE+++ S R++R+A SG+T Q+V++L+ Q
Sbjct: 363 LKNVSIDEKQISHVEAIIKSMTKLEREQPEIISAS--RKRRIANGSGRTVQEVNRLIKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK +
Sbjct: 421 EDMKKMMKQM 430
>gi|20807909|ref|NP_623080.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
gi|20516476|gb|AAM24684.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
Length = 447
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/426 (50%), Positives = 299/426 (70%), Gaps = 2/426 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ LT+++I E MR+++ ALLEADV+ VV+ F+ +V+E+A+G
Sbjct: 4 FESLSERLQGVFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALG 63
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL+KLMG S L P VI++ GLQG GKTT KLA
Sbjct: 64 QEVMESLTPAQQVIKIVHEELIKLMGSVESRLNLGSKVPAVIMMVGLQGSGKTTACGKLA 123
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
N LKKQGK+ +LVA D RPAAI QL +LG + VPV+T G +V + IAK ++ AK
Sbjct: 124 NLLKKQGKNPLLVACDTVRPAAIKQLQVLGANINVPVFTMGDKVDTADIAKASIDYAKSH 183
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
NVDVVI+DTAGRL ID +M+EL +K ++P E+LLV DAMTGQ+A + ++FN + I
Sbjct: 184 NVDVVIIDTAGRLHIDDELMEELVRIKEAVHPDEILLVADAMTGQDAVNVASSFNERLDI 243
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS+K V+ KPIK VG GE++ D+EPFYPDRMA RILGMGDVL+
Sbjct: 244 TGVILTKLDGDTRGGAALSIKAVTQKPIKYVGIGEKLGDIEPFYPDRMASRILGMGDVLT 303
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A EM +KI+S F DFL+Q R++ MG + +++ MIPG+ K
Sbjct: 304 LIEKAQAAIDEKKALEMGQKILSKQFTLEDFLEQLRSLKNMGPLDQLLAMIPGVNKSVLK 363
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V +EK LK +EA+I +MT EER+ P ++ S R++R+A+ SG T Q+V+ L+ Q +
Sbjct: 364 NVEVSEKDLKRIEAIILSMTKEERQNPSIINGS--RKRRIARGSGTTIQEVNNLLKQFEE 421
Query: 505 MRVRMK 510
+ MK
Sbjct: 422 TKKMMK 427
>gi|323484786|ref|ZP_08090143.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323691859|ref|ZP_08106113.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|355627802|ref|ZP_09049433.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
gi|323401892|gb|EGA94233.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323504066|gb|EGB19874.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|354820127|gb|EHF04553.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
Length = 454
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/429 (49%), Positives = 301/429 (70%), Gaps = 3/429 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + L G+ L++ ++ +++++ ALLEADVS VV++F+ +V EQAVG
Sbjct: 3 FESLADKLQNVFKNLTGKGRLSEADVKAGLKEVKMALLEADVSFKVVKQFINSVQEQAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKL 203
++ G+ P Q ++KIV DELVKLMG E++E+ S TVI++AGLQG GKTT +AK+
Sbjct: 63 TDVLNGLHPGQMVIKIVNDELVKLMGSEMTEIALKPSNEITVIMMAGLQGAGKTTTTAKI 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK +G++ +L A DVYRPAA++QL GE+ GVPV++ GT KP IAK +E A K
Sbjct: 123 AGKLKAKGRNPLLAACDVYRPAAVEQLQKNGEKQGVPVFSMGTGHKPVNIAKAAIEHASK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VVI+DTAGRL ID+ MM+EL ++K ++ + LLVVDAMTGQ+A + FN +IG
Sbjct: 183 NGHNVVIIDTAGRLHIDEDMMNELVEIKENVDVYQTLLVVDAMTGQDAVNVAGMFNDKIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTK+DGD+RGGAALS+K V+GKPI VG GE++ DLE FYPDRMA RILGMGDVL
Sbjct: 243 IDGVILTKMDGDTRGGAALSIKAVTGKPIIYVGMGEKLSDLEQFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S ++KA VM +E A+E+ KKI A FD+NDFL Q R + +MG MS ++ M+PGM ++
Sbjct: 303 SIIDKAAAVMDEEKAKELSKKIKKAEFDYNDFLDQMRQIKQMGGMSSILTMMPGMNQLKG 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK++ +EA+I +MT EER P+L+ +P R+KR+A +G +V+++V Q
Sbjct: 363 VDLDGNEKAMDRVEAIILSMTDEERRNPDLI--NPSRKKRIANGAGVDIAEVNRMVKQFG 420
Query: 504 QMRVRMKNL 512
+M+ MK L
Sbjct: 421 EMKKMMKQL 429
>gi|312793157|ref|YP_004026080.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344996632|ref|YP_004798975.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180297|gb|ADQ40467.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343964851|gb|AEM73998.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 443
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 299/429 (69%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LKG+ LT+++I + M++++ ALLEADV+ VV+ F+ V+++AV
Sbjct: 1 MFSSLSEKLQDVFKRLKGKGKLTEKDIKDAMKEVKLALLEADVNYKVVKDFINTVTQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DE+V L+GG ++L F+ S ++ ++ GLQG GKTT + KL
Sbjct: 61 GEEVLESLTPAQQVIKIVYDEMVNLLGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK+ +LVA D+YRPAAI QL ++ ++VGV + +IAK+G+E AK
Sbjct: 121 AGLLKKQGKNPLLVACDIYRPAAIKQLEVVAQKVGVKCFADYNSKDAVKIAKEGIEFAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DV IVDTAGRL I++ +MDEL +K + PTE+LLV+DAMTGQ+A + T FN ++G
Sbjct: 181 NRCDVAIVDTAGRLHINQELMDELVSIKNAIKPTEILLVLDAMTGQDAVNVATAFNEQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L
Sbjct: 241 IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + Q+ AEE++KK+ S F DFL Q + + +MG +S++I MIPG+
Sbjct: 301 TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MT EER+ P ++ S R++R+A SG T Q V++L+ Q
Sbjct: 361 VDFDAGEKELKKIEAIINSMTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFE 418
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 419 DMKKMMKQF 427
>gi|359404602|ref|ZP_09197435.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
gi|357560144|gb|EHJ41545.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
Length = 450
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/432 (50%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE +EL RP++IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPSQLMVKIVHDELAELMGGEAAELNL-NGRPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K+ +LVA DVYRPAAI+QL ++GEQ+GVPVY+ IA + EAK
Sbjct: 120 ANMLKNKQHKNPLLVACDVYRPAAIEQLKVVGEQIGVPVYSEPESKDVVSIANNAIREAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K+ DVVIVDTAGRL +D+ MM+E++ +K +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKSYDVVIVDTAGRLAVDEEMMNEIETLKNAINPNETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEAIDVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIQKNKFDFNDFLGQIEQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L +S RR R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDVDIDDNAFKGIEAIIKSMTPKERTNPEILNQS--RRMRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|323344206|ref|ZP_08084432.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
gi|323094935|gb|EFZ37510.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
Length = 449
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/453 (49%), Positives = 306/453 (67%), Gaps = 13/453 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKNFTDTVKKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE +EL + RP ++L++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPSQLMVKIVHDELAELMGGEAAELKLS-GRPAIVLMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ ++ +LVA DVYRPAAIDQL ++GEQVGVPVY+ +IA ++EAK
Sbjct: 120 ANMLKSKQKRNPLLVACDVYRPAAIDQLKVVGEQVGVPVYSEPDSKNVIEIATHAVKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL ID+ MM E+ ++K LNP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIVDTAGRLAIDEEMMTEISELKNALNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEAIDVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI FDFNDFL Q + +MG++ + GMIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARKLQKKIQKNKFDFNDFLNQIEQIKKMGNLKDLAGMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDIDIDDDAFKGVEAIIRSMTPKERSNPEMLNTS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMK--------NLMGVMEGGSLPALSNL 527
Q R MK +M M+G +P + +
Sbjct: 417 DQTRKMMKMVTGNQMAGMMSRMKGMKMPGMPKM 449
>gi|371777551|ref|ZP_09483873.1| signal recognition particle protein [Anaerophaga sp. HS1]
Length = 444
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/444 (49%), Positives = 303/444 (68%), Gaps = 8/444 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKG+ +T+ N+ E ++DIRRALL+ADV+ + F + V E+A+
Sbjct: 1 MFENLSERLERSFKILKGQGRITEINVAETLKDIRRALLDADVNYKTAKTFTETVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGG +++ K P VIL+AGLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPQQMMVKIVHDELAQLMGGTSTDINL-KGNPAVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN +K K+GK +LVAGDVYRPAAI+QL +LGEQ+GVPVYT P +IAK G++EAK
Sbjct: 120 ANLIKSKRGKHPVLVAGDVYRPAAINQLQVLGEQIGVPVYTEEGNTDPVKIAKAGIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL ID+ MM+E+ +K + P E L VVDAMTGQ+A FN +
Sbjct: 180 AKGHDVVIIDTAGRLAIDEEMMNEISAIKEAVKPHETLFVVDAMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KPIK VG GE+M+ L+ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAAISIRSVVDKPIKFVGMGEKMDALDVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE E+A ++QKKI F+F+DFL Q R + +MG++ + MIPGMGK+
Sbjct: 300 VSLVEKAQEQYDAEEARKLQKKIAKNQFNFDDFLGQIRQIKKMGNLKDLAAMIPGMGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP+ER+ P ++ S RRKR+A SG + Q+V++L+ Q
Sbjct: 360 K-NVDIDDDAFKGVEAIISSMTPQERQNPSIINGS--RRKRIAAGSGTSIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSN 526
R M+ + +G +L + N
Sbjct: 417 EDTRKAMRMM---TQGKNLSKMMN 437
>gi|366162322|ref|ZP_09462077.1| signal recognition particle protein [Acetivibrio cellulolyticus
CD2]
Length = 450
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/418 (50%), Positives = 299/418 (71%), Gaps = 4/418 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L++ L+ KLKG+ + ++++ E MR+I+ ALLEADV+ VV+ F+ VSE+AV
Sbjct: 2 VFEGLSNKLQETIKKLKGKGRVNEKDVKEMMREIKLALLEADVNFKVVKDFIAKVSERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL+ LMG S++VFA PTV ++ GLQG GKTT S KL
Sbjct: 62 GQDVLESLTPGQQIIKIVHEELINLMGPGQSKVVFAPKPPTVYMMVGLQGSGKTTTSGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQGK+ +LVA DVYRPAAI QL ++G Q+GV V++ G + P IAK +E AK
Sbjct: 122 ANLLRKQGKNPLLVACDVYRPAAIKQLQVVGGQLGVDVFSMGDQTNPVDIAKAAVEHAKI 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D+VI+DTAGRL ID+ +MDELK++K + P E+LLVVD+MTGQ+A + TFN ++G
Sbjct: 182 KQYDLVIIDTAGRLHIDEKLMDELKNIKDTVRPHEILLVVDSMTGQDAVNVSETFNEKLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSVK V+GKPIK +G GE++ DLEPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVILTKLDGDTRGGAALSVKTVTGKPIKFIGMGEKLSDLEPFFPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE ++ A EM++K+ + F DFL Q + + +MG +++++GM+PG+
Sbjct: 302 SLIEKAQEAFDEKAALEMERKMRTQQFTLEDFLDQMQQIKKMGPLNKIVGMLPGVNADAL 361
Query: 444 AQVREA--EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
++ A +K L EA+I +MT +ER P ++ S RRKR+A SG T Q V++++
Sbjct: 362 KEINSADSDKELGRFEAIIRSMTKKERNDPSIINGS--RRKRIAAGSGTTVQDVNKVL 417
>gi|227536075|ref|ZP_03966124.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|227243972|gb|EEI93987.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
Length = 445
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/430 (51%), Positives = 295/430 (68%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ LKG+ +T+ N+ E M++IR+ALL+ADV+ + F V ++A+
Sbjct: 1 MFQNLQDKLDRAFKVLKGQGNITEINVAETMKEIRKALLDADVNYKTAKSFTDDVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q L KI+ DEL +LMGG V+EL +K+ PTVIL+AGL G GKTT S KL
Sbjct: 61 GQNVLTSISPGQLLTKIMNDELTELMGGAVTELDISKN-PTVILIAGLNGAGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+GK +LVAGDVYRPAAIDQL +LG QVGVPV+ P IA+ G+EEAK
Sbjct: 120 ANYLKDKKGKKPLLVAGDVYRPAAIDQLEVLGGQVGVPVFVNRESNDPIAIAQAGVEEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL ID+A+M E+ VK P E+L VVD+MTGQ+A FN +
Sbjct: 180 RNGHNVVIIDTAGRLAIDEALMVEITAVKEATKPQEILFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+ME L+ FYPDRMA RILGMGDV
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ ++ A E+QKKI FDFNDF Q + + +MG+M ++GMIPG+GK
Sbjct: 300 VSLVERAQQQFDEKQAAELQKKIRKNKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP ERE P+ + + RR R+A+ SG +V++L+ Q
Sbjct: 360 -KDVEVDDNAFKPIEAIIDSMTPFERENPDAIDQK--RRIRIAKGSGTDINEVNKLMKQF 416
Query: 503 FQMRVRMKNL 512
MR MK +
Sbjct: 417 GDMRKVMKQM 426
>gi|269836377|ref|YP_003318605.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
gi|269785640|gb|ACZ37783.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
Length = 504
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 305/430 (70%), Gaps = 3/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L A + ++ + LT++++ E MR++RRALLEADV+ VVR FV AV E+AV
Sbjct: 1 MFETLSDRLTAVFQRIGNKGRLTEQDVDEAMREVRRALLEADVNYKVVRDFVSAVRERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ++ IVRDEL+K++G E L A+ PT++++ GLQG GKTT AK+
Sbjct: 61 GEEVLKALTPAQQVISIVRDELIKILGEERVPLQLAQVPPTIVMVVGLQGSGKTTHVAKI 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKK+G+ ++VA DVYRPAAIDQL LG Q+ VPVY+ GT+ P IAK ++ A+
Sbjct: 121 ANLLKKEGRRPLMVAADVYRPAAIDQLQTLGGQIDVPVYSEGTKANPVDIAKNAVKLARD 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VV++DTAGRLQID+ MM E++ + + P E+LLV DAMTGQEA + F+ +
Sbjct: 181 RGYTVVLIDTAGRLQIDEPMMQEVERIAEAVKPHEILLVADAMTGQEAVNVAQEFHRRLA 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTK+DGD+RGGAALS++ V G PIK +G GER++ +EPFYPDR+A RILGMGDVL
Sbjct: 241 LTGLVLTKMDGDARGGAALSIRSVVGVPIKYIGTGERIDAVEPFYPDRLASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-IT 442
+ +E+AQ + +E++ +++K+++ F+F DFL Q + + RMG +++++ MIPG+G+ +
Sbjct: 301 TLIERAQAEITEEESRALEEKVLAGQFNFEDFLNQLQQIKRMGPLTQLLEMIPGIGQALR 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
QV+ ++ K +EAMI +MTPEER P++L P RRKR+A SG + QV+QLV Q
Sbjct: 361 QQQVQISDDEFKHIEAMIFSMTPEERRNPDIL--KPSRRKRIAAGSGTSVAQVNQLVNQF 418
Query: 503 FQMRVRMKNL 512
QM+ M
Sbjct: 419 KQMQKMMAQF 428
>gi|289423976|ref|ZP_06425768.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429728356|ref|ZP_19263082.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
gi|289155612|gb|EFD04285.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429149855|gb|EKX92817.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
Length = 452
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/452 (48%), Positives = 312/452 (69%), Gaps = 11/452 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A+ KL+ + LT+E++ MR+++ ALLEADV+ VV+ F++ V E+ +
Sbjct: 2 IFEGLSEKLQNAFGKLRSKGKLTEEDVKLAMREVKMALLEADVNFKVVKDFIKVVQERCI 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q +VKIV +EL LMG S++ F+ PTVI++ GLQG GKTT S KL
Sbjct: 62 GEDVMKSLTPGQMVVKIVNEELTALMGDVQSKISFSSKSPTVIMMVGLQGAGKTTTSGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YLK QGK+ +LVAGDVYRPAAI QL ++GE++ + V+T G +V P IAK LE A K
Sbjct: 122 AGYLKGQGKNPLLVAGDVYRPAAIKQLQVVGEKLDIEVFTLGDKVSPVDIAKAALEHANK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL +D+ +M ELKD+K V P E+LLVVDAMTGQ+A + +F+ +G
Sbjct: 182 NKNDLVIIDTAGRLHVDEVLMQELKDIKSVARPQEILLVVDAMTGQDAVNVAESFDTALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTK+DGD+RGGAALS++ V+ KPIK VG GE+++++EPFYPDRMA RILGMGDVL
Sbjct: 242 IDGVVLTKMDGDTRGGAALSIRAVTKKPIKFVGMGEKLDNIEPFYPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + E A+E++ K+ DF DFL Q + ++GS+ +++ MIPGMG +
Sbjct: 302 TLIEKAQSSLDMEKAKELEAKMRKNEMDFEDFLNQLEQIQKIGSIDKIMDMIPGMGGMK- 360
Query: 444 AQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQ+ + E K LK +A+I++MT +ER P +L S R+KR+A+ S T V++L+
Sbjct: 361 AQMGDMEKGKKELKKTKAIIQSMTVKERRNPSILNAS--RKKRIARGSATTVADVNRLIK 418
Query: 501 QLFQMRVRMK-----NLMGVMEGGSLPALSNL 527
Q +M+ MK N+MG M+ G P L L
Sbjct: 419 QFNEMKKMMKMFQSGNMMGKMKKGGFPKLPKL 450
>gi|163790804|ref|ZP_02185229.1| signal recognition particle protein [Carnobacterium sp. AT7]
gi|159873872|gb|EDP67951.1| signal recognition particle protein [Carnobacterium sp. AT7]
Length = 437
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 313/439 (71%), Gaps = 8/439 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L++A K++ + +T+ ++ E MR++R ALLEADV+ VV+ FV+ VS +AVG
Sbjct: 3 FEGLTERLQSAMTKMRRKGKVTEADVKEMMREVRLALLEADVNFKVVKDFVKTVSARAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 AEVLESLSPGQQIIKIVSEELTELMGGEQATIQTAAKAPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+YL+K Q K +LVA D+YRPAAI QL +G+Q+ VPV++ G +V P +IA+QG+E+AK
Sbjct: 123 SYLRKNQNKRPLLVAADIYRPAAIQQLETIGKQLDVPVFSMGDQVSPVEIARQGIEKAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D V++DTAGRLQID+ +M EL D+K PTE+ LVVDAMTGQEAA + +F+ ++
Sbjct: 183 EHLDFVLIDTAGRLQIDETLMQELSDIKETTQPTEIFLVVDAMTGQEAANVAASFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK G GE+++ LEPFYPDRMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTGKPIKFTGSGEKLDALEPFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ +EEM K+ +FDFNDF++Q V+ MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDFDEKKSEEMITKLRENSFDFNDFIEQMDQVSNMGPIEDILKMIPGMNNVPG 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K M+A++ +MTP+ERE P++L++S RR+R+A+ S + +V++++ Q
Sbjct: 363 LDKLQIDPKDTARMKAIVLSMTPQERENPDILSQS--RRRRIARGSARPIAEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSL 521
+ K +M M G++
Sbjct: 421 NE----SKKMMSQMSKGNM 435
>gi|431771034|ref|ZP_19559423.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|431772480|ref|ZP_19560819.1| signal recognition particle protein [Enterococcus faecium E2369]
gi|430634058|gb|ELB70199.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|430637931|gb|ELB73923.1| signal recognition particle protein [Enterococcus faecium E2369]
Length = 472
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTERLQQAMGKIRKKGKVSEADVKEMMREIRLALLEADVNLQVVKNFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +G E +EL + PTVI++AGLQG GKTT + KLA
Sbjct: 63 AEVLESLSPAQQIVKIVDEELTITLGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYLKK + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GTEV P +I +QG+E AK+
Sbjct: 123 NYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+ +MDELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDETLMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + +I MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMRENSFDFNDFIEQLDQVVGMGPLEDLIKMIPGMNQVPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K ++ +AM+ +MTP ER P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVERKKAMVYSMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KESRKMMQQM 430
>gi|397904685|ref|ZP_10505586.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
gi|397162281|emb|CCJ32920.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
Length = 459
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 301/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + KL+G+ L+++++ + MR+++ ALLEADV+ VV+ F+ V+E+A+G
Sbjct: 3 FEGLTHKLQETFKKLRGKGKLSEKDVKDAMREVKLALLEADVNYKVVKDFINVVTERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +E++KLMG S++ + PTVI+L GLQG GKTT++AKLA
Sbjct: 63 QEVMESLTPAQQVIKIVHEEMIKLMGSTESKINISPKPPTVIMLVGLQGAGKTTMAAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K K +LVA D+YRPAAI QL ILG Q+ +PV+T G +V P IAK LE AKK
Sbjct: 123 LHLRKNNKHPLLVAADIYRPAAIKQLQILGGQIDIPVFTLGDKVNPVDIAKASLEYAKKN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D+VI+DTAGRL ID+ +M EL+ +K+ +NP E+LLVVDAMTGQ+A + +FN ++ I
Sbjct: 183 AKDIVIIDTAGRLHIDEELMLELEGIKKEVNPDEILLVVDAMTGQDAVNVAQSFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALSVK V+GKPIK G GE++ DLE FYPDRMA RILGMGD+LS
Sbjct: 243 TGVILTKLDGDTRGGAALSVKAVTGKPIKYAGVGEKLSDLEIFYPDRMASRILGMGDILS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM--GKIT 442
+EKAQ+ + ++ A EMQ+K+ F DFL Q + + ++G + +I MIPG+ K+
Sbjct: 303 LIEKAQQAIDEKKALEMQQKLERQEFTLEDFLDQMQQMKKLGPLKDLIKMIPGLDTSKLD 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
E EK + +EA+I++MT EER P ++ S R+KR+A+ SG T Q V++L+
Sbjct: 363 DIDFEENEKEMAKIEAIIKSMTKEERRNPSIINSS--RKKRIAKGSGTTIQDVNKLLNNF 420
Query: 503 FQMRVRMKNL 512
Q R MK
Sbjct: 421 EQARKMMKQF 430
>gi|393779012|ref|ZP_10367268.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|420150558|ref|ZP_14657715.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429746642|ref|ZP_19279981.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429756689|ref|ZP_19289274.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
gi|392611092|gb|EIW93845.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|394751650|gb|EJF35395.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429165764|gb|EKY07800.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429170816|gb|EKY12477.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
Length = 443
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/420 (50%), Positives = 297/420 (70%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNNVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ + + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GQQVLTTLQPGQLMVKIVKDELTQLMGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAIDQL I+GEQVGVPV++ P IAK+G++ AK
Sbjct: 120 ANYLKNKRNKKPLLVACDVYRPAAIDQLHIVGEQVGVPVFSDKGNNNPVDIAKKGVQYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +++VVIVDTAGRL +D+ MM E+ ++ + LNP E L VVDAMTGQ+A FN +
Sbjct: 180 ENHLNVVIVDTAGRLAVDEQMMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+++K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL+Q + + RMGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 360 K-DLDIKDDAFKHIEAIIHSMTPKERNTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|294622904|ref|ZP_06701817.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|425030604|ref|ZP_18435770.1| signal recognition particle protein [Enterococcus faecium 515]
gi|431301266|ref|ZP_19507585.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|431775548|ref|ZP_19563820.1| signal recognition particle protein [Enterococcus faecium E2560]
gi|291597676|gb|EFF28829.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|403017277|gb|EJY30044.1| signal recognition particle protein [Enterococcus faecium 515]
gi|430580456|gb|ELB18923.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|430642817|gb|ELB78583.1| signal recognition particle protein [Enterococcus faecium E2560]
Length = 472
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTERLQQAMGKIRKKGKVSEADVKEMMREIRLALLEADVNLQVVKNFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +G E +EL + PTVI++AGLQG GKTT + KLA
Sbjct: 63 AEVLESLSPAQQIVKIVDEELTITLGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYLKK + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GTEV P +I +QG+E AK+
Sbjct: 123 NYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+ +MDELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDETLMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + +I MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K ++ +AM+ +MTP ER P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVERKKAMVYSMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KESRKMMQQM 430
>gi|256820615|ref|YP_003141894.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|315223725|ref|ZP_07865575.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|420158534|ref|ZP_14665351.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
gi|256582198|gb|ACU93333.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|314946300|gb|EFS98299.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|394763650|gb|EJF45731.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
Length = 442
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/420 (50%), Positives = 297/420 (70%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNNVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ + + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GQQVLTTLQPGQLMVKIVKDELTQLMGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAIDQL I+GEQVGVPV++ P IAK+G++ AK
Sbjct: 120 ANYLKNKRNKKPLLVACDVYRPAAIDQLHIVGEQVGVPVFSDKGNNNPVDIAKKGVQYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +++VVIVDTAGRL +D+ MM E+ ++ + LNP E L VVDAMTGQ+A FN +
Sbjct: 180 ENHLNVVIVDTAGRLAVDEQMMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+++K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL+Q + + RMGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 360 K-DLDIKDDAFKHIEAIIHSMTPKERNTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|212693973|ref|ZP_03302101.1| hypothetical protein BACDOR_03497 [Bacteroides dorei DSM 17855]
gi|237710361|ref|ZP_04540842.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|345516836|ref|ZP_08796322.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|423239666|ref|ZP_17220782.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
gi|212663505|gb|EEB24079.1| signal recognition particle protein [Bacteroides dorei DSM 17855]
gi|229437723|gb|EEO47800.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|229455823|gb|EEO61544.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392645706|gb|EIY39429.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
Length = 440
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/442 (49%), Positives = 300/442 (67%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGGE +ELV + RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTALMGGETAELVL-EGRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +LGEQ+ VPVY+ P QIA + EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLGEQIEVPVYSELDSKNPVQIALNAIHEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL ID+ MM+E++ +K+ +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAIDEQMMNEIEAIKKAINPDETLFVVDSMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PE+L + RR R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPQERTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|387818670|ref|YP_005679017.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
gi|322806714|emb|CBZ04283.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
Length = 449
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/422 (48%), Positives = 307/422 (72%), Gaps = 3/422 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A KL+G+ L++++I E MR+++ ALLEADV+ VV+ F+++V+E+ +G
Sbjct: 3 FDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKCMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV +EL +LMG S L + S TVI+L GLQG GKTT++ KLA
Sbjct: 63 NEVLQSLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA DVYRPAAI QL ++G+Q+ +PV+T G ++ P I+K +E AK
Sbjct: 123 LHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + +E A+E+ +++++ F+F DFL+ + + ++G +++++ MIPGM ++
Sbjct: 303 LIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +EK +K EA+I +MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 363 NIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLKD- 421
Query: 503 FQ 504
FQ
Sbjct: 422 FQ 423
>gi|312127973|ref|YP_003992847.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777992|gb|ADQ07478.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 443
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 300/429 (69%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +L+G+ LT+++I + M++++ ALLEADV+ VV+ F+ V+++AV
Sbjct: 1 MFSSLSEKLQDVFKRLRGKGKLTEKDIKDAMKEVKLALLEADVNYKVVKDFINTVTQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DE+V+L+GG ++L F+ S ++ ++ GLQG GKTT + KL
Sbjct: 61 GEEVLESLTPAQQVIKIVYDEMVRLLGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK+ +LVA D+YRPAAI QL ++ ++VGV + +IAK+G+E AK
Sbjct: 121 AGLLKKQGKNPLLVACDIYRPAAIKQLEVVAQKVGVKCFADYNSKDAVKIAKEGIEFAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DV IVDTAGRL I++ +MDEL +K + PTE+LLV+DAMTGQ+A + T FN ++G
Sbjct: 181 SRCDVAIVDTAGRLHINQELMDELVSIKNAIKPTEILLVLDAMTGQDAVNVATAFNEQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L
Sbjct: 241 IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + Q+ AEE++KK+ S F DFL Q + + +MG +S++I MIPG+
Sbjct: 301 TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MT EER+ P ++ S R++R+A SG T Q V++L+ Q
Sbjct: 361 VDFDAGEKELKKIEAIINSMTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFE 418
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 419 DMKRMMKQF 427
>gi|260437024|ref|ZP_05790840.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
gi|292810333|gb|EFF69538.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
Length = 448
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/440 (49%), Positives = 310/440 (70%), Gaps = 12/440 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ L+ +++ M++++ ALLEADV+ VV++FV VSE+AVG
Sbjct: 3 FDSLSEKLQNIFKKLRGKGRLSADDVKTAMKEVKMALLEADVNFKVVKQFVNTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK-SRPTVILLAGLQGVGKTTVSAKL 203
++ + P Q ++KIV +E+V LMG E +E+ F + PTVI++AGLQG GKTT +AK+
Sbjct: 63 QDVMSSLTPGQMVIKIVNEEMVALMGSETTEISFVPGAAPTVIMMAGLQGAGKTTTTAKI 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK++GK +LVA DVYRPAAI QL I GE+ GVPV+ G KP IAK L A+K
Sbjct: 123 AGKLKEKGKRPLLVACDVYRPAAIKQLQINGEKQGVPVFEMGDNNKPVDIAKAALAHAQK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +VVI+DTAGRL +D+ MM+ELK++K +N + +LVVDAMTGQ+A + +TFN +IG
Sbjct: 183 NNNNVVILDTAGRLHVDEDMMNELKEIKEAVNVHQTILVVDAMTGQDAVNVASTFNEQIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V+GKPI +G GE++ DLE FYPDRMA RILGMGDVL
Sbjct: 243 IDGVVLTKLDGDTRGGAALSIKAVTGKPILYIGMGEKLSDLEQFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EK Q +E A+EM++K+ + FDFND+L+ + V ++G + +++ M+PGM
Sbjct: 303 TLIEKVQADFDEEKAKEMERKLKKSEFDFNDYLESFKQVKKLGGIGKMLNMMPGMN---- 358
Query: 444 AQVREA-----EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQL 498
+Q++ A EK + +EA+I +MTP ER P+LL +P R+ R+A+ +G +V++L
Sbjct: 359 SQMKNAADNVDEKQIARVEAIIYSMTPAERANPKLL--NPSRKNRIARGAGVDIAEVNRL 416
Query: 499 VAQLFQMRVRMKNLMGVMEG 518
V Q QM+ MK L G+M G
Sbjct: 417 VKQQEQMKKMMKQLPGMMGG 436
>gi|148380407|ref|YP_001254948.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|153933476|ref|YP_001384624.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|153935337|ref|YP_001388141.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|168180670|ref|ZP_02615334.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|168184655|ref|ZP_02619319.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226949802|ref|YP_002804893.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|237795885|ref|YP_002863437.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|421837788|ref|ZP_16271860.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
gi|148289891|emb|CAL83999.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|152929520|gb|ABS35020.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|152931251|gb|ABS36750.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|182668381|gb|EDT80360.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|182672287|gb|EDT84248.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226841461|gb|ACO84127.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|229263878|gb|ACQ54911.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|409739977|gb|EKN40451.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
Length = 449
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/422 (48%), Positives = 306/422 (72%), Gaps = 3/422 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A KL+G+ L++++I E MR+++ ALLEADV+ VV+ F+++V+E+ +G
Sbjct: 3 FDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKCMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL +LMG S L + S TVI+L GLQG GKTT++ KLA
Sbjct: 63 NEVLESLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA DVYRPAAI QL ++G+Q+ +PV+T G ++ P I+K +E AK
Sbjct: 123 LHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + +E A+E+ +++++ F+F DFL+ + + ++G +++++ MIPGM ++
Sbjct: 303 LIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +EK +K EA+I +MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 363 NIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLKD- 421
Query: 503 FQ 504
FQ
Sbjct: 422 FQ 423
>gi|34763935|ref|ZP_00144833.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27886292|gb|EAA23570.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 444
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/447 (48%), Positives = 309/447 (69%), Gaps = 12/447 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L + + + K++G L++ NI + +R+++ +LLEADV+ VV+ F +SE+A+
Sbjct: 1 MLENLGNRFQDIFKKIRGHGRLSESNIKDALREVKMSLLEADVNYKVVKDFTNKISEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IRG+ P QQ +K+V DELV+L+GG S+L PT+I+LAGLQG GKTT +AKL
Sbjct: 61 GTEVIRGINPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LV DVYRPAAI QL +LG+Q+GV VY+ IA + +E+AK+
Sbjct: 121 AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDTKDVVGIATRAIEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +IVDTAGRL ID+ +M+ELK++KR + P E+LLVVDAM GQ+A L +FN +
Sbjct: 181 INATYMIVDTAGRLHIDETLMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V GKPIK +G GE++ D+E F+PDR+ ILGMGDV+
Sbjct: 241 VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSGILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQEV+ + +A+ +++KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI
Sbjct: 301 SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID- 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT EER+KP++L S R+ R+A+ SG V++L+ Q
Sbjct: 360 -DLAPAEKEMKKVEAIIQSMTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFE 416
Query: 504 QMRVRMK--------NLMGVMEGGSLP 522
QM+ MK N+ + +GG P
Sbjct: 417 QMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|442804649|ref|YP_007372798.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442740499|gb|AGC68188.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 447
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 303/427 (70%), Gaps = 2/427 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ K++ +T++++ E MR++R ALLEADV+ VV+ F+ VSE+AV
Sbjct: 2 VFEGLSEKLQNVMKKIRSAGRVTEKDVKEMMREVRMALLEADVNYKVVKDFIAKVSERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL++LMGG V++L + S PTV ++ GLQG GKTTV KL
Sbjct: 62 GQEVLESLTPGQQVIKIVHEELIQLMGGAVAKLTVSPSPPTVYMMVGLQGAGKTTVCGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYL+KQGK +LVA DVYRPAA+ QL +LG+Q+ +PV+ GT P +IAK+ ++ A+
Sbjct: 122 ANYLRKQGKRPLLVACDVYRPAAVKQLQVLGKQIDIPVFEMGTGTSPVEIAKKSVDYARS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D VI+DTAGRL ID+ +M EL+++K + P E+LLVVD+MTGQ+A + +FN +
Sbjct: 182 MQFDTVIIDTAGRLHIDEELMHELENIKLSVKPHEILLVVDSMTGQDAVNVAESFNNRLD 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALS K V+GKP+K VG GE++ D EPFYPDRMA RILGMGDVL
Sbjct: 242 IDGIILTKLDGDTRGGAALSTKAVTGKPVKFVGIGEKLSDFEPFYPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ ++ A E++KK+ + F +DFL+Q + + MG +S+ +GM+PG+
Sbjct: 302 TLIEKAQASFDEKKALELEKKLRTQQFTLDDFLEQLQQIKNMGPISQFLGMLPGVNSKVL 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ EK + +EA+I++MT +ERE P ++ S R++R+A+ SG + QQV+Q++ Q
Sbjct: 362 KDIQIDEKQMVYVEAIIQSMTKKERENPSIINSS--RKRRIAEGSGTSIQQVNQVLKQFE 419
Query: 504 QMRVRMK 510
Q++ MK
Sbjct: 420 QVKKMMK 426
>gi|404329162|ref|ZP_10969610.1| signal recognition particle protein [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 447
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 305/432 (70%), Gaps = 4/432 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++A K++G+ +++ ++ + R+IR ALLEADV+ VV+ FV+ V E+A+G
Sbjct: 3 FESLSDRLQSAMRKIRGKGKVSEADVKQMTREIRLALLEADVNFKVVKTFVKRVQERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V+DEL +LMGGE ++L FA PTVIL GLQG GKTT +AKLA
Sbjct: 63 QEVLKSLTPGQQIIKVVQDELTELMGGEQTKLNFALKPPTVILFVGLQGAGKTTSAAKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NY++K K +++A D+YRPAAI QL LG Q+ +PV++ G +V P I +QGLE+A+
Sbjct: 123 NYIRKAHNKKPLMIAADIYRPAAIKQLQTLGRQLDIPVFSLGDQVNPVDIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+V++DTAGRL +D A+M+EL+ +K V +P E+ LVVDAMTGQ+A + FN +
Sbjct: 183 DHNDLVMIDTAGRLHVDDALMEELEQIKSVSHPDEIFLVVDAMTGQDAVNVAGAFNDRLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG I+TKLDGD+RGGAALS++ V+GKPIK VG GE+M+ LEPF+PDRMA RILGMGDVL
Sbjct: 243 ITGVIMTKLDGDTRGGAALSIRSVTGKPIKFVGMGEKMDALEPFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + +E A EM KK+ + +F +DFL+Q + +MG + ++ M+PG K
Sbjct: 303 SLIEKAQNTVDEEKAREMAKKLQTVSFTLDDFLEQIGQIRKMGPLQDLLAMMPGANKFKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK + +EAMI +MTP E+ P+++ S RRKR+A SG + V++L+ Q
Sbjct: 363 MKNMQIDEKKIDQVEAMIRSMTPLEKNDPDIINAS--RRKRIALGSGTSIADVNRLLKQF 420
Query: 503 FQMRVRMKNLMG 514
M+ MK MG
Sbjct: 421 KDMKKMMKQFMG 432
>gi|150004753|ref|YP_001299497.1| signal recognition protein [Bacteroides vulgatus ATCC 8482]
gi|294775183|ref|ZP_06740709.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|319641812|ref|ZP_07996491.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|345518550|ref|ZP_08797997.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|423312329|ref|ZP_17290266.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
gi|149933177|gb|ABR39875.1| putative signal recognition protein [Bacteroides vulgatus ATCC
8482]
gi|254835935|gb|EET16244.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|294450995|gb|EFG19469.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|317386568|gb|EFV67468.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|392688813|gb|EIY82097.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
Length = 440
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/442 (49%), Positives = 300/442 (67%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGGE +ELV + RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTALMGGETAELVL-EGRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +LGEQ+ VPVY+ P QIA + EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLGEQIEVPVYSELDSKNPVQIALNAIHEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL ID+ MM+E++ +K+ +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAIDEQMMNEIEAIKKAVNPDETLFVVDSMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PE+L + RR R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPQERTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|260591562|ref|ZP_05857020.1| signal recognition particle protein [Prevotella veroralis F0319]
gi|260536593|gb|EEX19210.1| signal recognition particle protein [Prevotella veroralis F0319]
Length = 451
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 299/432 (69%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L +RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGEAVGLNLT-NRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGVPVY+ ++IA L EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVPVYSELENKNVNEIADHALAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E++ +K +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGCDVVIIDTAGRLAVDEEMMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG + Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEVLNNS--RRQRIAKGSGTSLQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|69248474|ref|ZP_00604748.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257878620|ref|ZP_05658273.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257883120|ref|ZP_05662773.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257891867|ref|ZP_05671520.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257894437|ref|ZP_05674090.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260559333|ref|ZP_05831515.1| signal recognition particle protein [Enterococcus faecium C68]
gi|261208009|ref|ZP_05922687.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289566895|ref|ZP_06447302.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|293556478|ref|ZP_06675052.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|293563841|ref|ZP_06678274.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|293567270|ref|ZP_06678624.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|294615586|ref|ZP_06695442.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|294619810|ref|ZP_06699200.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|314938080|ref|ZP_07845388.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|314943602|ref|ZP_07850359.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|314949239|ref|ZP_07852588.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|314952611|ref|ZP_07855603.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|314992459|ref|ZP_07857881.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|314997379|ref|ZP_07862334.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|383329196|ref|YP_005355080.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|389869023|ref|YP_006376446.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|406581072|ref|ZP_11056251.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|406583326|ref|ZP_11058408.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|406585675|ref|ZP_11060654.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|406591244|ref|ZP_11065537.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410936498|ref|ZP_11368363.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|415894168|ref|ZP_11550289.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|416142609|ref|ZP_11599613.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|424780120|ref|ZP_18207001.1| signal recognition particle protein [Enterococcus faecium V689]
gi|424802491|ref|ZP_18228004.1| signal recognition particle protein [Enterococcus faecium S447]
gi|424850064|ref|ZP_18274479.1| signal recognition particle protein [Enterococcus faecium R501]
gi|424857588|ref|ZP_18281718.1| signal recognition particle protein [Enterococcus faecium R499]
gi|424907911|ref|ZP_18331345.1| signal recognition particle protein [Enterococcus faecium R497]
gi|424951324|ref|ZP_18366439.1| signal recognition particle protein [Enterococcus faecium R496]
gi|424953399|ref|ZP_18368365.1| signal recognition particle protein [Enterococcus faecium R494]
gi|424958870|ref|ZP_18373490.1| signal recognition particle protein [Enterococcus faecium R446]
gi|424962238|ref|ZP_18376608.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|424962648|ref|ZP_18376966.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|424968649|ref|ZP_18382259.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|424972691|ref|ZP_18386013.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|424975462|ref|ZP_18388619.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|424978927|ref|ZP_18391807.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|424980489|ref|ZP_18393283.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|424985230|ref|ZP_18397718.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|424988719|ref|ZP_18401022.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|424992574|ref|ZP_18404627.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|424996450|ref|ZP_18408257.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|424999108|ref|ZP_18410749.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|424999881|ref|ZP_18411474.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|425006151|ref|ZP_18417344.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|425009463|ref|ZP_18420482.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|425012624|ref|ZP_18423426.1| signal recognition particle protein [Enterococcus faecium E422]
gi|425015748|ref|ZP_18426339.1| signal recognition particle protein [Enterococcus faecium E417]
gi|425019469|ref|ZP_18429832.1| signal recognition particle protein [Enterococcus faecium C621]
gi|425020205|ref|ZP_18430524.1| signal recognition particle protein [Enterococcus faecium C497]
gi|425023133|ref|ZP_18433270.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|425035379|ref|ZP_18440220.1| signal recognition particle protein [Enterococcus faecium 514]
gi|425040142|ref|ZP_18444628.1| signal recognition particle protein [Enterococcus faecium 513]
gi|425043894|ref|ZP_18448093.1| signal recognition particle protein [Enterococcus faecium 511]
gi|425045035|ref|ZP_18449158.1| signal recognition particle protein [Enterococcus faecium 510]
gi|425050560|ref|ZP_18454293.1| signal recognition particle protein [Enterococcus faecium 509]
gi|425051000|ref|ZP_18454694.1| signal recognition particle protein [Enterococcus faecium 506]
gi|425055763|ref|ZP_18459232.1| signal recognition particle protein [Enterococcus faecium 505]
gi|425058389|ref|ZP_18461771.1| signal recognition particle protein [Enterococcus faecium 504]
gi|425062030|ref|ZP_18465213.1| signal recognition particle protein [Enterococcus faecium 503]
gi|427396388|ref|ZP_18889147.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430819711|ref|ZP_19438357.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430822757|ref|ZP_19441332.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430825710|ref|ZP_19443912.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430827813|ref|ZP_19445944.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430830914|ref|ZP_19448970.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430832888|ref|ZP_19450904.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430837718|ref|ZP_19455678.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430838321|ref|ZP_19456268.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430843828|ref|ZP_19461727.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430848123|ref|ZP_19465953.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430849397|ref|ZP_19467177.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430857923|ref|ZP_19475554.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430860428|ref|ZP_19478028.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430865375|ref|ZP_19481073.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430876823|ref|ZP_19483925.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430948278|ref|ZP_19485867.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|431003805|ref|ZP_19488903.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|431147517|ref|ZP_19499227.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|431230043|ref|ZP_19502246.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|431252112|ref|ZP_19504170.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|431373172|ref|ZP_19510081.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|431413391|ref|ZP_19512150.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|431497436|ref|ZP_19514590.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|431542316|ref|ZP_19518344.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|431730890|ref|ZP_19525566.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|431742899|ref|ZP_19531782.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|431746433|ref|ZP_19535259.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|431750302|ref|ZP_19539022.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|431755033|ref|ZP_19543691.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|431759542|ref|ZP_19548154.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|431764354|ref|ZP_19552897.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|431767459|ref|ZP_19555911.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|431780833|ref|ZP_19568998.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|431781698|ref|ZP_19569842.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|431785919|ref|ZP_19573940.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|447912364|ref|YP_007393776.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
gi|68194411|gb|EAN08916.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257812848|gb|EEV41606.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257818778|gb|EEV46106.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257828227|gb|EEV54853.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257830816|gb|EEV57423.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260074693|gb|EEW63013.1| signal recognition particle protein [Enterococcus faecium C68]
gi|260077767|gb|EEW65480.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289161301|gb|EFD09194.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|291590019|gb|EFF21813.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|291591529|gb|EFF23182.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|291593943|gb|EFF25427.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|291601357|gb|EFF31635.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|291604211|gb|EFF33712.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|313588547|gb|EFR67392.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|313593001|gb|EFR71846.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|313595279|gb|EFR74124.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|313597720|gb|EFR76565.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|313642569|gb|EFS07149.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|313644380|gb|EFS08960.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|364089611|gb|EHM32283.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|364092330|gb|EHM34712.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|378938890|gb|AFC63962.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|388534272|gb|AFK59464.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|402916210|gb|EJX37106.1| signal recognition particle protein [Enterococcus faecium R501]
gi|402919953|gb|EJX40511.1| signal recognition particle protein [Enterococcus faecium S447]
gi|402924607|gb|EJX44804.1| signal recognition particle protein [Enterococcus faecium V689]
gi|402928616|gb|EJX48462.1| signal recognition particle protein [Enterococcus faecium R499]
gi|402929375|gb|EJX49141.1| signal recognition particle protein [Enterococcus faecium R497]
gi|402930680|gb|EJX50312.1| signal recognition particle protein [Enterococcus faecium R496]
gi|402938666|gb|EJX57652.1| signal recognition particle protein [Enterococcus faecium R446]
gi|402939172|gb|EJX58110.1| signal recognition particle protein [Enterococcus faecium R494]
gi|402941446|gb|EJX60175.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|402951133|gb|EJX69084.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|402951484|gb|EJX69407.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|402952859|gb|EJX70629.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|402953431|gb|EJX71149.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|402959911|gb|EJX77113.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|402966338|gb|EJX82977.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|402966421|gb|EJX83049.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|402971075|gb|EJX87376.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|402972744|gb|EJX88923.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|402973572|gb|EJX89685.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|402980395|gb|EJX96006.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|402984170|gb|EJX99494.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|402989128|gb|EJY04080.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|402990604|gb|EJY05473.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|402992577|gb|EJY07267.1| signal recognition particle protein [Enterococcus faecium E422]
gi|402994145|gb|EJY08702.1| signal recognition particle protein [Enterococcus faecium E417]
gi|402997904|gb|EJY12200.1| signal recognition particle protein [Enterococcus faecium C621]
gi|403009720|gb|EJY23146.1| signal recognition particle protein [Enterococcus faecium C497]
gi|403010704|gb|EJY24057.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|403013586|gb|EJY26670.1| signal recognition particle protein [Enterococcus faecium 513]
gi|403017560|gb|EJY30299.1| signal recognition particle protein [Enterococcus faecium 511]
gi|403018194|gb|EJY30891.1| signal recognition particle protein [Enterococcus faecium 514]
gi|403023055|gb|EJY35348.1| signal recognition particle protein [Enterococcus faecium 509]
gi|403028037|gb|EJY39881.1| signal recognition particle protein [Enterococcus faecium 510]
gi|403033144|gb|EJY44663.1| signal recognition particle protein [Enterococcus faecium 505]
gi|403038537|gb|EJY49749.1| signal recognition particle protein [Enterococcus faecium 504]
gi|403039030|gb|EJY50209.1| signal recognition particle protein [Enterococcus faecium 506]
gi|403039670|gb|EJY50804.1| signal recognition particle protein [Enterococcus faecium 503]
gi|404453120|gb|EKA00214.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|404456877|gb|EKA03486.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|404462274|gb|EKA08055.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|404468030|gb|EKA13066.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410735141|gb|EKQ77057.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|425723058|gb|EKU85949.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430440303|gb|ELA50571.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430442686|gb|ELA52707.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430445868|gb|ELA55581.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430482503|gb|ELA59621.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430484159|gb|ELA61189.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430486938|gb|ELA63767.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430487045|gb|ELA63824.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430491916|gb|ELA68365.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430497687|gb|ELA73724.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430535954|gb|ELA76342.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430537855|gb|ELA78169.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430546403|gb|ELA86362.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430552087|gb|ELA91833.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430553028|gb|ELA92741.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430557495|gb|ELA96952.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430558051|gb|ELA97483.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|430561894|gb|ELB01148.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|430574029|gb|ELB12807.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|430575641|gb|ELB14346.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|430578538|gb|ELB17090.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|430583317|gb|ELB21701.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|430588371|gb|ELB26563.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|430589299|gb|ELB27437.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|430592880|gb|ELB30881.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|430595449|gb|ELB33352.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|430607562|gb|ELB44874.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|430608667|gb|ELB45906.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|430609840|gb|ELB47013.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|430618019|gb|ELB54876.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|430625942|gb|ELB62541.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|430630973|gb|ELB67311.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|430631539|gb|ELB67861.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|430638743|gb|ELB74653.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|430646636|gb|ELB82107.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|430648916|gb|ELB84305.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|445188073|gb|AGE29715.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
Length = 472
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTERLQQAMGKIRKKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +G E +EL + PTVI++AGLQG GKTT + KLA
Sbjct: 63 AEVLESLSPAQQIVKIVDEELTITLGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYLKK + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GTEV P +I +QG+E AK+
Sbjct: 123 NYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+ +MDELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDETLMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + +I MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K ++ +AM+ +MTP ER P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVERKKAMVYSMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KESRKMMQQM 430
>gi|431794557|ref|YP_007221462.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784783|gb|AGA70066.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 453
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 304/432 (70%), Gaps = 6/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LK + LT+ ++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSEKLQETFKRLKSKGKLTEADVNEAMREVRMALLEADVNFKVVKDFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +E+V LMGG S++ + PTVI+L GLQG GKTT AKL
Sbjct: 61 GQEVLESLSPGQQVIKIVNEEMVALMGGVSSKINISSKPPTVIMLVGLQGAGKTTHGAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LG+Q+ VPV++ G E P +IA LE A
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLEVLGDQIKVPVFSLGQE-NPVKIALASLEHALS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +DVVI+DTAGRL I++ +M ELKD+K + P E+LLVVDAMTGQ+A + +F+ ++G
Sbjct: 180 QGLDVVIIDTAGRLHINEELMGELKDIKAAVKPHEILLVVDAMTGQDAVNVAESFHGDLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK V+G PIK G GE+++ +EPF+PDRMA RILGMGDVL
Sbjct: 240 IDGIIMTKLDGDTRGGAALSVKAVTGCPIKFAGIGEKLDAIEPFFPDRMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-IT 442
+ +EKAQE ++ A EM++K+ F +DFL Q + + +MG + ++ MIPG GK +
Sbjct: 300 TLIEKAQEAFDEKQAREMEQKLRKQEFTLDDFLDQMQQIKKMGPLGSLLEMIPGAGKQLK 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
AQ+ EK + +EA+I +MT EER KP L+ +S R++R+A+ SG + Q+V +L+ Q
Sbjct: 360 DAQID--EKDMSHVEAIIHSMTQEERRKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQF 415
Query: 503 FQMRVRMKNLMG 514
QM+ MK G
Sbjct: 416 EQMQKMMKQFAG 427
>gi|153940237|ref|YP_001391747.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|170754416|ref|YP_001781992.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|384462755|ref|YP_005675350.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|429243872|ref|ZP_19207356.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
gi|152936133|gb|ABS41631.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|169119628|gb|ACA43464.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|295319772|gb|ADG00150.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|428759078|gb|EKX81467.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
Length = 449
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/422 (48%), Positives = 306/422 (72%), Gaps = 3/422 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A KL+G+ L++++I E MR+++ ALLEADV+ VV+ F+++V+E+ +G
Sbjct: 3 FDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKCMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL +LMG S L + S TVI+L GLQG GKTT++ KLA
Sbjct: 63 NEVLESLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA DVYRPAAI QL ++G+Q+ +PV+T G ++ P I+K +E AK
Sbjct: 123 LHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + +E A+E+ +++++ F+F DFL+ + + ++G +++++ MIPGM ++
Sbjct: 303 LIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +EK +K EA+I +MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 363 NIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLLKD- 421
Query: 503 FQ 504
FQ
Sbjct: 422 FQ 423
>gi|312622773|ref|YP_004024386.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203240|gb|ADQ46567.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 443
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 298/429 (69%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + KL+G+ LT+++I E M++++ ALLEADV+ VV+ F+ V+++AV
Sbjct: 1 MFSSLSEKLQDVFKKLRGKGKLTEKDIKEAMKEVKLALLEADVNYKVVKDFINTVTQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DE+V L+GG ++L F+ S ++ +L GLQG GKTT + KL
Sbjct: 61 GEEVLESLTPAQQVIKIVYDEMVNLLGGSDTKLAFSPSGFSIYMLVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK+QGK+ +LVA D+YRPAAI QL I+ ++VGV + +IAK+G+E AK
Sbjct: 121 AGLLKRQGKNPLLVACDIYRPAAIKQLEIVAQKVGVKCFADYNSKDAVKIAKEGIEFAKA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DV IVDTAGRL I++ +MDEL +K + PTE+LLV+DAMTGQ+A + FN ++G
Sbjct: 181 SRCDVAIVDTAGRLHINQELMDELVAIKNAIKPTEILLVLDAMTGQDAVNVAAAFNEQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L
Sbjct: 241 IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + Q+ AEE++KK+ S F DFL Q + + +MG +S++I MIPG+
Sbjct: 301 TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGVKLKGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MT EER+ P ++ S R++R+A SG T Q V++L+ Q
Sbjct: 361 VDFDAGEKELKKIEAIINSMTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLRQFE 418
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 419 DMKRMMKQF 427
>gi|383812645|ref|ZP_09968078.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
gi|383354702|gb|EID32253.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
Length = 451
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/432 (50%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L SRP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGESVGLNLT-SRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGVPVY+ ++IA L EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVPVYSEPESKNVNEIADHALAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E++ +K +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVIIDTAGRLAVDEEMMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP ER PE+L S RR+R+A+ SG + Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPRERTNPEVLNNS--RRQRIAKGSGTSLQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|227551902|ref|ZP_03981951.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257884147|ref|ZP_05663800.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257886935|ref|ZP_05666588.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257895507|ref|ZP_05675160.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257898122|ref|ZP_05677775.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|293378372|ref|ZP_06624541.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|293571524|ref|ZP_06682547.1| signal recognition particle protein [Enterococcus faecium E980]
gi|424766376|ref|ZP_18193729.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430841665|ref|ZP_19459584.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430851902|ref|ZP_19469637.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430855109|ref|ZP_19472820.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|431033237|ref|ZP_19491083.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|431076960|ref|ZP_19494996.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|431108321|ref|ZP_19497472.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|431586239|ref|ZP_19520754.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|431737188|ref|ZP_19526142.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|431739675|ref|ZP_19528595.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|431752200|ref|ZP_19540884.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|431757047|ref|ZP_19545678.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|431762305|ref|ZP_19550867.1| signal recognition particle protein [Enterococcus faecium E3548]
gi|227178974|gb|EEI59946.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257819985|gb|EEV47133.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257822989|gb|EEV49921.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257832072|gb|EEV58493.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257836034|gb|EEV61108.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|291608390|gb|EFF37689.1| signal recognition particle protein [Enterococcus faecium E980]
gi|292643236|gb|EFF61377.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|402410897|gb|EJV43285.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430494441|gb|ELA70691.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430542484|gb|ELA82592.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430547647|gb|ELA87570.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|430564338|gb|ELB03522.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|430566415|gb|ELB05528.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|430569445|gb|ELB08449.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|430593417|gb|ELB31403.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|430598845|gb|ELB36561.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|430604291|gb|ELB41782.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|430614124|gb|ELB51117.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|430619336|gb|ELB56163.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|430624997|gb|ELB61647.1| signal recognition particle protein [Enterococcus faecium E3548]
Length = 472
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTERLQQAMGKLRKKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +G E +EL + PTVI++AGLQG GKTT + KLA
Sbjct: 63 AEVLESLSPAQQIVKIVDEELTITLGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYLKK + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GTEV P +I +QG+E A++
Sbjct: 123 NYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+ +MDELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDETLMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + +I MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K ++ +AM+ +MTP ER P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVERKKAMVYSMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KESRKMMQQM 430
>gi|325105803|ref|YP_004275457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
gi|324974651|gb|ADY53635.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
Length = 448
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 291/430 (67%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE A+ LKG+ ++T+ N+ E M++IR+ALL+ADV+ + F V ++A+
Sbjct: 1 MFDNLQEKLEGAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKSFTDEVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q L K++ DEL LMGG V+EL K PT+IL+AGL G GKTT + KL
Sbjct: 61 GQNVLTAISPGQLLTKVMNDELTLLMGGSVTELDL-KQNPTIILIAGLNGAGKTTFTGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK Q K +LVAGDVYRPAAIDQL +L QVG VYT P IA +G+ K
Sbjct: 120 ANFLKTQKNKKPLLVAGDVYRPAAIDQLEVLAGQVGAEVYTNRESKDPVAIALEGIAHGK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +V+I+DTAGRL +D A+MDE+ +VK+ NP E+L VVDAMTGQ+A FN +
Sbjct: 180 QNGNNVIIIDTAGRLTLDDALMDEIAEVKKATNPQEILFVVDAMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS+K V KPIK VG GE+M+ L+ FYPDRMA RILGMGDV
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFVGTGEKMDALDVFYPDRMASRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ ++ A E+QKKI FDFNDFL Q + + +MG++ ++GMIPG+GK+
Sbjct: 300 VSLVERAQQQFDEKKAAELQKKIRKNKFDFNDFLGQIQQIKKMGNIKDLMGMIPGVGKMM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ERE P+ + +P RR+R+A+ SG +V++L+ Q
Sbjct: 360 K-NIEVDDNAFKGIEAIIHSMTPYERENPDTI--NPSRRQRIAKGSGTDIAEVNKLIKQF 416
Query: 503 FQMRVRMKNL 512
MR MK
Sbjct: 417 EDMRKVMKQF 426
>gi|332981635|ref|YP_004463076.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
gi|332699313|gb|AEE96254.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
Length = 438
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 308/432 (71%), Gaps = 3/432 (0%)
Query: 88 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGL 147
+T L++A+ KL G+ L++ ++ E MRD+R ALLEADV+ VV+ FV V+E+A+G G+
Sbjct: 1 MTEKLQSAFKKLTGKGKLSESDVKEAMRDVRMALLEADVNYAVVKEFVNKVTEKAIGQGV 60
Query: 148 IRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL 207
+ + P QQ++KIV ++L++LMG S++ +A + PTVI++ GLQG GKTT SAKLA YL
Sbjct: 61 LESLTPGQQVIKIVNEQLIELMGSSQSKIKWASAPPTVIMMVGLQGSGKTTTSAKLAGYL 120
Query: 208 KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVD 267
KQGK+ +LVA D+YRPAA+ QL I+G++V +PV++ P I++Q LE AKK + D
Sbjct: 121 AKQGKNPLLVACDIYRPAAVKQLQIVGQKVNIPVFSL-EGANPVAISQQALEYAKKHSND 179
Query: 268 VVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGA 327
VVI+DTAGRL ID MM EL+D+K ++P E+LLVVDAMTGQ+A + FN + I G
Sbjct: 180 VVILDTAGRLHIDDEMMQELEDIKSSVHPDEILLVVDAMTGQDAVNVAKNFNERLAIDGV 239
Query: 328 ILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVE 387
+LTKLDGD+RGGAALSVK V+GKPIK VG GE+++DLEPF+PDR+A RILGMGDVL+ +E
Sbjct: 240 VLTKLDGDTRGGAALSVKAVTGKPIKFVGMGEKLDDLEPFHPDRIASRILGMGDVLTLIE 299
Query: 388 KAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVR 447
KAQ + ++ A E++ K+ + F DFL Q + +MG +S+++ M+PG+ +++
Sbjct: 300 KAQAAVDEKKAMELENKLRNQQFTLEDFLDQLHEIKKMGPLSQIMDMLPGINAKKMGKIQ 359
Query: 448 EAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV 507
+K L +EA+I +MT +ER +P ++ S RR+R+A+ SG T Q+V++L+ Q + +
Sbjct: 360 VDDKELGRIEAIINSMTKQERREPAIINGS--RRRRIAKGSGTTIQEVNRLLKQFEETKR 417
Query: 508 RMKNLMGVMEGG 519
M+ + + G
Sbjct: 418 LMRQFTSMEKSG 429
>gi|410584603|ref|ZP_11321705.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
gi|410504189|gb|EKP93701.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
Length = 445
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/429 (49%), Positives = 305/429 (71%), Gaps = 5/429 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+A + +L+G+ LT+ ++ +R++R ALLEADV+ VV+ F+ V E+AVG
Sbjct: 3 FEGLAEKLQAVFKRLRGKGKLTEADVEAALREVRLALLEADVNFKVVKDFIARVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL +LMGG+ + L P V++L GLQG GKTT +AKLA
Sbjct: 63 QEVLESLTPAQQVIKIVHDELTQLMGGQHARLDLGGELPAVVMLVGLQGSGKTTTAAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L +QG+ +LVA DVYRPAA++QLV LG+QV VPVY GT+ P IA++G+ EA+++
Sbjct: 123 RLLTRQGRQPLLVAADVYRPAAVEQLVTLGQQVQVPVYAPGTDRDPVDIAREGVAEARRR 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
DVV++DTAGRL ID A+M+EL+ +++ + P E+LLVVDAMTGQ+A + TF+ +GI
Sbjct: 183 GRDVVLIDTAGRLHIDDALMEELERIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALSV+ V+G+PIK G GER++ LEPF+P+RMA RILGMGDVLS
Sbjct: 243 DGVILTKLDGDARGGAALSVRAVTGRPIKFAGLGERVDQLEPFHPERMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITP 443
+EKAQ V + A+ +++K+ FD DFL+Q R V +MG + +++ MIPG+ G++
Sbjct: 303 LIEKAQAVFDAQQAQRLERKLREQAFDLEDFLEQLRQVRKMGPLDQLLAMIPGLGGRLKD 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V E E L+ +EA+I++MTPEER +PE++ S RR+R+A SG Q V++L+ Q
Sbjct: 363 VTVDERE--LRRIEAIIQSMTPEERRRPEIINAS--RRRRIAMGSGTRVQDVNRLLKQFA 418
Query: 504 QMRVRMKNL 512
+ + MK +
Sbjct: 419 ETQRLMKQV 427
>gi|325680130|ref|ZP_08159696.1| signal recognition particle protein [Ruminococcus albus 8]
gi|324108205|gb|EGC02455.1| signal recognition particle protein [Ruminococcus albus 8]
Length = 457
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/437 (48%), Positives = 305/437 (69%), Gaps = 6/437 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L + + KLKG LT+ ++ E M++++ ALLEADVS VV+ FV V+E++VG
Sbjct: 3 FEGLSEKLGSVFKKLKGRGKLTEADVREAMKEVKMALLEADVSYKVVKDFVANVTERSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV DELVKLMG S++ F P VI++ GLQG GKTT +AKLA
Sbjct: 63 EDVLKSLTPGQQVIKIVNDELVKLMGEANSKINFPSKPPCVIMMCGLQGSGKTTHAAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
K+QG +L+A DVYRPAAIDQL I+ E+ VPV+ G ++ P +I KQGL++AK
Sbjct: 123 KMFKRQGNRPLLIAADVYRPAAIDQLKIVAEKADVPVFEMG-QIDPRKIVKQGLKQAKDY 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D+VI+DTAGRL ID+ +MDELKD+K++ P+E++LVVDAM GQ+A + ++F+ +GI
Sbjct: 182 GNDLVIIDTAGRLHIDEELMDELKDIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALGI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
ILTKLD D+RGGAALSV V+GKPIK VG GE++++ EPF+P+RMA RILGMGD+L+
Sbjct: 242 DSVILTKLDSDTRGGAALSVLAVTGKPIKFVGMGEKLDEFEPFHPERMASRILGMGDMLT 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+E+A + + +E+AE++ KK+ S FD ND L Q + + +MGS+ +I M+PG KIT
Sbjct: 302 LIERATQTVDEEEAEKLAKKLQSEGFDLNDLLDQMKQIQKMGSVKSIIQMLPGANKITDE 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
+ E +L+ EAMI +MT ER +P+++ P R++R+A SG V+QL+ Q
Sbjct: 362 DLESGEAALRKTEAMINSMTKAERARPQII--DPKRKRRIAAGSGTQVSDVNQLLKQYDA 419
Query: 505 MRVRMKNLMGVMEGGSL 521
M+ MK MG+ GG +
Sbjct: 420 MKKMMKE-MGI--GGGM 433
>gi|261408023|ref|YP_003244264.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
gi|261284486|gb|ACX66457.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
Length = 460
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/447 (47%), Positives = 312/447 (69%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L+ ++KL+G+ +++E++ MR++R ALLEADV+ VV+ FV V E+A+G
Sbjct: 3 FEGLTSRLQNVFSKLRGKGKVSEEDVTAAMREVRLALLEADVNFKVVKDFVSKVKEKAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L + PTVI++AGLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKSNKPPTVIMMAGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL +LG Q+ VPV++ G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNSKPLLVAGDIYRPAAIKQLEVLGNQINVPVFSLGDKTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+ELK + V+NP EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 GHDYVIIDTAGRLHVDEELMEELKQIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ A
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQA 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK + +EA++ +MT E+++P+++ + RRKR+A SG + +V++L+ Q
Sbjct: 363 KDLKVDEKQMGRIEAIVHSMTTAEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG AL L+
Sbjct: 421 EMRRVMKQFSDMMGPKGGKNKALKQLK 447
>gi|300772045|ref|ZP_07081915.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760348|gb|EFK57174.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 445
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/430 (50%), Positives = 295/430 (68%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ LKG+ +T+ N+ E M++IR+ALL+ADV+ + F V ++A+
Sbjct: 1 MFQNLQDKLDRAFKVLKGQGNITEINVAETMKEIRKALLDADVNYKTAKSFTDDVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q L KI+ DEL +LMGG V+EL +K+ PTVIL+AGL G GKTT S KL
Sbjct: 61 GQNVLTSISPGQLLTKIMNDELTELMGGAVTELDTSKN-PTVILIAGLNGAGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+GK +LVAGDVYRPAAIDQL +LG QVGVPV+ P I++ G+EEAK
Sbjct: 120 ANYLKDKKGKKPLLVAGDVYRPAAIDQLEVLGGQVGVPVFVNRESNDPIAISQAGVEEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL ID+A+M E+ VK P E+L VVD+MTGQ+A FN +
Sbjct: 180 RNGHNVVIIDTAGRLAIDEALMVEITAVKEATKPQEILFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+ME L+ FYPDRMA RILGMGDV
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ ++ A E+QKKI FDFNDF Q + + +MG+M ++GMIPG+GK
Sbjct: 300 VSLVERAQQQFDEKQAAELQKKIRKNKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP ERE P+ + + RR R+A+ SG +V++L+ Q
Sbjct: 360 -KDVEVDDNAFKPIEAIIDSMTPFERENPDAIDQK--RRIRIAKGSGTDINEVNKLMKQF 416
Query: 503 FQMRVRMKNL 512
MR MK +
Sbjct: 417 GDMRKVMKQM 426
>gi|224024147|ref|ZP_03642513.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
gi|224017369|gb|EEF75381.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
Length = 443
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 297/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL KLMGG+ +E+ K+RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTKLMGGDTAEIEL-KNRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +LG+QV VPVY+ P QIA ++EAK
Sbjct: 120 ARMLKMKKNRKPLLVACDVYRPAAIEQLKVLGQQVEVPVYSEPESKNPVQIALNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL ID+ MM+E++ +K +NP E L VVDAMTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAIDEQMMNEIEAIKNAINPDETLFVVDAMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLDAVDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIQKNQFDFNDFLTQIQQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PE+L S RR R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPQERTHPEILNGS--RRTRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|89895345|ref|YP_518832.1| hypothetical protein DSY2599 [Desulfitobacterium hafniense Y51]
gi|89334793|dbj|BAE84388.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 457
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/433 (49%), Positives = 306/433 (70%), Gaps = 4/433 (0%)
Query: 80 VRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVS 139
+RA MF L+ L+ + +LK + LT+ ++ E MR++R ALLEADV+ VV+ FV V
Sbjct: 1 MRAGMFQGLSEKLQETFKRLKSKGKLTEADVNEAMREVRMALLEADVNFKVVKDFVAKVK 60
Query: 140 EQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
E+++G ++ + P QQ++KIV +E+V LMGG S++ + PTVI+L GLQG GKTT
Sbjct: 61 ERSIGQEVLESLSPGQQVIKIVNEEMVALMGGVSSKINISSKPPTVIMLVGLQGAGKTTH 120
Query: 200 SAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLE 259
AKLAN LKKQGK +LVA D+YRPAAI QL +LGEQ+ VPV++ G E P +IA L+
Sbjct: 121 GAKLANMLKKQGKHPLLVACDIYRPAAIKQLEVLGEQIKVPVFSLGQE-NPVKIAAASLQ 179
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN 319
A + +DVVI+DTAGRL I++ +M EL+++K + P E+LLVVDAMTGQ+A + +F+
Sbjct: 180 HANSQGLDVVIIDTAGRLHINEELMGELREIKVSVKPHEILLVVDAMTGQDAVNVAESFH 239
Query: 320 IEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 379
E+G+ G ILTKLDGD+RGGAALSVK V+G PIK G GE+M+ +EPF+P+RMA RILGM
Sbjct: 240 NELGVDGIILTKLDGDTRGGAALSVKAVTGCPIKFAGVGEKMDAIEPFFPERMASRILGM 299
Query: 380 GDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG 439
GDVL+ +EKAQE ++ A EM++K+ F +DFL Q + + +MG ++ ++ MIPG+G
Sbjct: 300 GDVLTLIEKAQEAFDEKQAREMEQKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVG 359
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
K V+ EK + +EA+I +MT EER KP L+ +S R++R+A+ SG + Q+V +L+
Sbjct: 360 K-QMKDVQVDEKDMAHVEAIIHSMTAEERRKPALIKDS--RKRRIAKGSGTSIQEVGRLL 416
Query: 500 AQLFQMRVRMKNL 512
Q QM+ MK
Sbjct: 417 KQFEQMQKMMKQF 429
>gi|288928375|ref|ZP_06422222.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
gi|288331209|gb|EFC69793.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
Length = 450
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/458 (48%), Positives = 309/458 (67%), Gaps = 13/458 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ +KGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKIIKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL LMGGE L +RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAALMGGETVGLQLT-NRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K+ +LVA DVYRPAAI+QL ++ +QVGVPVY+ +IA + EAK
Sbjct: 120 ANLLKGKQHKNPLLVACDVYRPAAIEQLRVVAQQVGVPVYSEPDNKNVVEIANNAIREAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MMDE+ +K+ LNP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIVDTAGRLAVDEEMMDEIYRLKQALNPDETLFVVDSMTGQDAVNTAREFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
I G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD+
Sbjct: 240 DIDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEAIDVFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFLKQ + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDVDIDDNAFKGIEAIIKSMTPKERTNPEILNNS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 540
Q R MK +M G ++ ++ + S+ K PG
Sbjct: 417 DQTRKMMK----MMTGTNMAKMA----GMASKMKGMPG 446
>gi|187778958|ref|ZP_02995431.1| hypothetical protein CLOSPO_02553 [Clostridium sporogenes ATCC
15579]
gi|187772583|gb|EDU36385.1| signal recognition particle protein [Clostridium sporogenes ATCC
15579]
Length = 449
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/422 (48%), Positives = 306/422 (72%), Gaps = 3/422 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A KL+G+ L++++I E MR+++ ALLEADV+ VV+ F+++V+E+ +G
Sbjct: 3 FDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKCMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL +LMG S L + S TVI+L GLQG GKTT++ KLA
Sbjct: 63 NEVLGSLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA DVYRPAAI QL ++G+Q+ +PV+T G ++ P I+K +E AK
Sbjct: 123 LHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLSPVDISKAAIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +MDEL ++K +NPTE+LLVVDAMTGQ+A + FN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEELMDELHNIKEEVNPTEILLVVDAMTGQDAVNVANNFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + ++ A+E+ +++++ F+F DFL+ + + ++G +++++ MIPGM ++
Sbjct: 303 LIEKAQQSIDEDKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +EK +K EA+I +MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 363 NIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLKD- 421
Query: 503 FQ 504
FQ
Sbjct: 422 FQ 423
>gi|424827553|ref|ZP_18252340.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
gi|365979993|gb|EHN16034.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
Length = 449
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/422 (48%), Positives = 306/422 (72%), Gaps = 3/422 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A KL+G+ L++++I E MR+++ ALLEADV+ VV+ F+++V+E+ +G
Sbjct: 3 FDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKCMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL +LMG S L + S TVI+L GLQG GKTT++ KLA
Sbjct: 63 NEVLESLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA DVYRPAAI QL ++G+Q+ +PV+T G ++ P I+K +E AK
Sbjct: 123 LHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLSPVDISKAAIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +MDEL ++K +NPTE+LLVVD+MTGQ+A + FN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEELMDELHNIKEEVNPTEILLVVDSMTGQDAVNVANNFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + ++ A+E+ +++++ F+F DFL+ + + ++G +++++ MIPGM ++
Sbjct: 303 LIEKAQQSIDEDKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +EK +K EA+I +MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 363 NIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLKD- 421
Query: 503 FQ 504
FQ
Sbjct: 422 FQ 423
>gi|366053084|ref|ZP_09450806.1| signal recognition particle protein [Lactobacillus suebicus KCTC
3549]
Length = 480
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/449 (48%), Positives = 316/449 (70%), Gaps = 15/449 (3%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ KL+ + +T+ ++ E MRDIR ALLEADV+ VV+ FV+ V +A G
Sbjct: 3 FEGLTQRLQDTMAKLRRKPKVTEADLNETMRDIRLALLEADVNFKVVKDFVKQVRTRAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV +EL K+MG E +L ++ PT+I++AGLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNEELTKMMGEEAVDLNKSEKIPTIIMMAGLQGAGKTTTAGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK Q M +A D+YRPAAIDQL + E + VPV+ GT+V P +I +QGLE+A+
Sbjct: 123 LKLKNDQNARPMFIAADIYRPAAIDQLEQVAESIDVPVFQLGTDVDPVEIVRQGLEQARD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRLQID+ +MDEL ++K++ +P E+LLVVDAMTGQ A FN ++
Sbjct: 183 QHNDYVIIDTAGRLQIDEKLMDELANIKKLADPDEILLVVDAMTGQNAVETAQGFNDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK VG+GE+M+DL+ F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGQGEKMDDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A++ +K+ +FDFNDFL Q V +MGSM ++ MIPGM P
Sbjct: 303 TLIEKAQKDFDEEQAQKTVEKMRENSFDFNDFLDQMSQVQKMGSMEDIMKMIPGMAN-NP 361
Query: 444 AQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
A ++ A K ++ ++A++ +MTPEERE P++L +P RR+R+A +G+ +V++++
Sbjct: 362 A-LKNANIDPKDMEHIKAIVYSMTPEERENPDVL--NPSRRRRLAAGAGRPVVEVNRMIK 418
Query: 501 QLFQMRVRMK-----NLMGV--MEGGSLP 522
Q QM+ MK N+ G+ + GG++P
Sbjct: 419 QFNQMKKMMKQVSNGNMSGMENLMGGNMP 447
>gi|329929595|ref|ZP_08283302.1| signal recognition particle protein [Paenibacillus sp. HGF5]
gi|328936240|gb|EGG32692.1| signal recognition particle protein [Paenibacillus sp. HGF5]
Length = 460
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/447 (47%), Positives = 312/447 (69%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L+ ++KL+G+ +++E++ MR++R ALLEADV+ VV+ FV V E+A+G
Sbjct: 3 FEGLTSRLQNVFSKLRGKGKVSEEDVTAAMREVRLALLEADVNFKVVKDFVSKVKEKAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L + PTVI++AGLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKSNKPPTVIMMAGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL +LG Q+ VPV++ G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNSRPLLVAGDIYRPAAIKQLEVLGNQINVPVFSLGDKTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+ELK + V+NP EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 GHDYVIIDTAGRLHVDEELMEELKQIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ A
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQA 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK + +EA++ +MT E+++P+++ + RRKR+A SG + +V++L+ Q
Sbjct: 363 KDLKVDEKQMGRIEAIVHSMTTAEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG AL L+
Sbjct: 421 EMRRVMKQFSDMMGPKGGKNKALKQLK 447
>gi|315648170|ref|ZP_07901271.1| signal recognition particle protein [Paenibacillus vortex V453]
gi|315276816|gb|EFU40159.1| signal recognition particle protein [Paenibacillus vortex V453]
Length = 460
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/447 (47%), Positives = 313/447 (70%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L+ ++KL+G+ +++E++ MR++R ALLEADV+ VV+ FV V E+A+G
Sbjct: 3 FEGLTSRLQNVFSKLRGKGKVSEEDVTAAMREVRLALLEADVNFKVVKDFVSKVKEKAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV E+ +LMGG ++LV + PTVI++AGLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKEMTELMGGSQAKLVKSNKPPTVIMMAGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL +LGEQ+ VPV++ G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNSRPLLVAGDIYRPAAIKQLEVLGEQINVPVFSLGDKTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+ELK + V+NP EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 GHDYVIIDTAGRLHVDEELMEELKQIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMGK+
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQT 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK + +EA++ +MT E+++P+++ + RRKR+A SG + +V++L+ Q
Sbjct: 363 KDLKVDEKQMGRIEAIVHSMTTAEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG A+ L+
Sbjct: 421 EMRRVMKQFSDMMGPKGGKNKAMKQLK 447
>gi|210622533|ref|ZP_03293226.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
gi|210154168|gb|EEA85174.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
Length = 453
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 306/436 (70%), Gaps = 7/436 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ ++KL+ + LT++++ + MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQNTFSKLRSKGKLTEKDVKDAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PTVI++ GLQG GKTT + KL
Sbjct: 62 GQEVMKSLTPGQHVIKIVNEELTALMGDVQSKIMISSKPPTVIMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA DVYRPAAI QL ++GE++ +PV+ G + P IAK GL A+K
Sbjct: 122 GGYFKKQGKKPLLVACDVYRPAAIKQLQVVGEKLDIPVFAMGDKENPVNIAKAGLSHAQK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL +D+ +M+ELK++K + P E+LL VDAMTGQ+A + +FN +G
Sbjct: 182 NGNDMVIIDTAGRLHVDEVLMEELKNIKSEVRPHEILLTVDAMTGQDAVNVAESFNDALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS++ V+ KPIK +G GE++EDLEPF+PDRMA RILGMGDVL
Sbjct: 242 IDGVVLTKLDGDTRGGAALSIRAVTKKPIKFIGMGEKLEDLEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E++KK+ FDF D L Q + +MGSM +++GM+PGM +
Sbjct: 302 SLIEKAQEAVDIEKAKELEKKMRKQEFDFEDLLDQFEQLKKMGSMDKLLGMMPGMANMK- 360
Query: 444 AQVREAE----KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
Q+ + + K +K A+I++MT EER P +L S R+KR+A+ SG + Q+V++L+
Sbjct: 361 NQIGDVDLQNNKDMKRSMAIIQSMTVEERRNPSILNAS--RKKRIAKGSGTSVQEVNRLI 418
Query: 500 AQLFQMRVRMKNLMGV 515
QL +M+ MK G+
Sbjct: 419 KQLNEMKKMMKMFTGM 434
>gi|295397866|ref|ZP_06807929.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
gi|294973911|gb|EFG49675.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
Length = 484
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/452 (48%), Positives = 305/452 (67%), Gaps = 22/452 (4%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A + + +T+ ++ E MR++R ALLEADV+ VV+ FV+ V+E+A+
Sbjct: 3 FESLSDRLQGAVQTMGKKGKITEGDLKEMMREVRLALLEADVNFKVVKDFVKRVNERALN 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV DEL LMGGE ++ FA + PTVI++AGLQG GKTT KLA
Sbjct: 63 SEVLQSLSPAQQVVKIVNDELTDLMGGEHEDIQFATTPPTVIMMAGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LKK K +LVAGD+YRPAAI+QL +G+Q+ +PV+T G +V P +IA Q +E AK
Sbjct: 123 AFLKKNDHKKPLLVAGDIYRPAAINQLQTIGQQLDLPVFTLGDQVSPVEIATQAIEYAKM 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+V +DTAGRLQID+ +M ELKD+K + P E+LL VD+MTGQEAA + F+ E+
Sbjct: 183 NGHDLVFIDTAGRLQIDERLMTELKDIKAAVEPDEILLTVDSMTGQEAANVAKAFDEELD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS+ V+GKPIK G GE++ ++E FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIVSVTGKPIKFTGTGEKLNEIERFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--- 440
+ +EKAQ + +AE M K+ +DFNDF+K + +MGSM ++ MIPGM K
Sbjct: 303 TLIEKAQAEFDENEAEAMAAKMRENTYDFNDFIKNMDQMNKMGSMKDILKMIPGMNKLGN 362
Query: 441 -----ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQV 495
I P Q+ + +AMI++MTP ERE P+ + +S RR+R+A+ S T Q+V
Sbjct: 363 LDDLNIDPKQMAQT-------KAMIQSMTPYERENPDSINQS--RRRRIAKGSATTLQEV 413
Query: 496 SQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 527
++L+ Q + R LM M G++ AL N+
Sbjct: 414 NRLIKQFNESR----KLMSAMSNGNMGALQNM 441
>gi|188585994|ref|YP_001917539.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350681|gb|ACB84951.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 447
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/424 (50%), Positives = 306/424 (72%), Gaps = 7/424 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M +L+ L+ + KL G+ + ++++ E MR++R ALLEADV+ VV+ FV V E+AV
Sbjct: 1 MLQRLSEKLQDTFGKLTGKGKVNEKDVKEAMREVRLALLEADVNYKVVKEFVNNVKERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIVRDEL +LMGGEVSE+ F+ PTVI+L+GLQG GKTT SAKL
Sbjct: 61 GEEVLESLTPGQQVIKIVRDELTQLMGGEVSEVNFSDQPPTVIMLSGLQGTGKTTASAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A KK GK+ ++VA D RPAAI QL +LGEQ +PV++ G + P+ IAK +E AKK
Sbjct: 121 AKKFKKDGKNPLMVACDTQRPAAIKQLQVLGEQTDIPVFSMGDKQHPADIAKGAVEHAKK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+DVVI+DTAGRL ID+ +M EL++V+ + P E+LLVVDAMTGQ+A + F+ ++
Sbjct: 181 NQMDVVILDTAGRLHIDEDLMTELREVESSVEPHEILLVVDAMTGQDAVNVAERFDQDLD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G ++TKLDGD+RGGAALSVK+V+GKPIK +G GE++++LE F+PDR+A RILGMGDV+
Sbjct: 241 LSGIVMTKLDGDTRGGAALSVKKVTGKPIKFIGTGEKVDELEVFHPDRLASRILGMGDVM 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---K 440
S +EKA+ M Q+ A+E++KKI S +F F DFL+Q + + MG + +++ M+PGM K
Sbjct: 301 SLIEKAETSMDQKKAQELEKKIKSQSFTFEDFLEQLQQLKSMGPLDQIMDMMPGMAGNKK 360
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ V E E L +EA+I++MT EER KPE++ S R+KR+A+ SG Q V++L+
Sbjct: 361 MKNFSVDEQE--LVKIEAIIQSMTQEERVKPEVINSS--RKKRIAKGSGTRVQDVNKLLK 416
Query: 501 QLFQ 504
Q Q
Sbjct: 417 QFEQ 420
>gi|346226274|ref|ZP_08847416.1| signal recognition particle protein [Anaerophaga thermohalophila
DSM 12881]
Length = 443
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/428 (50%), Positives = 296/428 (69%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKG+ T+T+ N+ E ++DIRRALL+ADV+ + F + V E+A+
Sbjct: 1 MFENLSERLERSFKILKGQGTITEINVAETLKDIRRALLDADVNFKTAKNFTETVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMG +++ K P VIL+AGLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPQQMMVKIVHDELAELMGSSSTDINL-KGNPAVILVAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +K K+GK ML+AGDVYRPAAI+QL +LG Q+ VPVYT P +IAK G++EAK
Sbjct: 120 AYLIKNKRGKHPMLIAGDVYRPAAINQLQVLGGQISVPVYTEEGNTDPVKIAKAGIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL ID+ MMDE+ +K + P E L VVDAMTGQ+A FN +
Sbjct: 180 AKGHDVVIIDTAGRLAIDEQMMDEIAAIKDAVKPHETLFVVDAMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KPIK VG GE+M+ L+ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAAISIRSVVDKPIKFVGMGEKMDALDVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE E+A+++QKKI F+F+DF+ Q R + +MG++ + GMIPGMGK+
Sbjct: 300 VSLVEKAQEQYDAEEAKKLQKKIAKNQFNFDDFIGQIRQIKKMGNLKDLAGMIPGMGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTPEER++P ++ S RRKR+A SG + Q+V++L+ Q
Sbjct: 360 K-NVDIDDDAFKGVEAIISSMTPEERQQPSIINGS--RRKRIAAGSGTSIQEVNRLMKQF 416
Query: 503 FQMRVRMK 510
R M+
Sbjct: 417 EDTRKAMR 424
>gi|260912277|ref|ZP_05918828.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
gi|260633578|gb|EEX51717.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
Length = 450
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/458 (48%), Positives = 309/458 (67%), Gaps = 13/458 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ +KGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKIIKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL LMGGE L K+RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELATLMGGESVGLQL-KNRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K+ +LVA DVYRPAAI+QL ++ +QVGV VY+ +IA + EAK
Sbjct: 120 ANLLKSKQHKNPLLVACDVYRPAAIEQLKVVAQQVGVSVYSEPDNKNVVEIANNAIREAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MMDE+ +K+ LNP E L VVD+MTGQ+A FN +
Sbjct: 180 SKGNDVVIVDTAGRLAVDEEMMDEIYRLKQALNPDETLFVVDSMTGQDAVNTAREFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
I G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD+
Sbjct: 240 DIDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEAIDVFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFLKQ + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DVDIDDNAFKGIEAIIKSMTPKERTNPEILNNS--RRQRIAKGSGTNIQEVNKLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 540
Q R MK +M G ++ ++ + S+ K PG
Sbjct: 417 DQTRKMMK----MMTGTNMAKMA----GMASKMKGMPG 446
>gi|291542195|emb|CBL15305.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus
bromii L2-63]
Length = 469
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/428 (49%), Positives = 304/428 (71%), Gaps = 4/428 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L A+ KLK + L+++++ E MR++R ALLEADV+ V + F V+E+AVG
Sbjct: 3 FEGLADKLGNAFKKLKNKGKLSEKDVKEAMREVRLALLEADVNYKVAKDFTNKVTERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q +VKIV +EL LMGGE + + FA PTVI++ GLQG GKTT +AKLA
Sbjct: 63 QDVMQSLTPAQMVVKIVDEELTSLMGGEDARIEFASKPPTVIMMCGLQGSGKTTHTAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
LKKQG++ +L A DVYRPAAIDQL ++GE+ GVPV+ G + P +IAK+ ++ AK
Sbjct: 123 KMLKKQGRNPLLAACDVYRPAAIDQLKVVGEKAGVPVFEMG-KANPVKIAKEAIKRAKDY 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
DVVI+DTAGRL ID+A+MDELK++K+ + P E+LLV+D+MTGQ+A + +FN + I
Sbjct: 182 GNDVVILDTAGRLHIDEALMDELKNIKKEVEPNEILLVIDSMTGQDAVNVAKSFNELLDI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALSVK V+G+PIK G GE+++D+E F+PDRMA RILGMGDVL+
Sbjct: 242 TGVILTKLDGDTRGGAALSVKAVTGRPIKFAGTGEKLDDIEVFHPDRMASRILGMGDVLT 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+E AQ M E AEEM +K+MS FDFND Q V +MG + ++ IPG+GK
Sbjct: 302 LIEDAQNKMDAEKAEEMAQKMMSNKFDFNDLYDQFEQVKKMGPLKGILSKIPGVGKQLEG 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V ++ + ++A+I +MTPEER P ++ +P R++R+A SG++ ++V++L+ Q+ Q
Sbjct: 362 -VDIDDRQIDWVQAIILSMTPEERSHPHIM--NPSRKRRIAAGSGRSIEEVNRLIKQIDQ 418
Query: 505 MRVRMKNL 512
M+ M+ +
Sbjct: 419 MQKMMRQM 426
>gi|334135560|ref|ZP_08509044.1| signal recognition particle protein [Paenibacillus sp. HGF7]
gi|333606896|gb|EGL18226.1| signal recognition particle protein [Paenibacillus sp. HGF7]
Length = 453
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/449 (47%), Positives = 310/449 (69%), Gaps = 3/449 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ ++KL+G+ LT+E++ E +R++R ALLEADV+ VV+ F+ V E+AVG
Sbjct: 3 FEGLTGRLQGVFDKLRGKGKLTEEDVSEALREVRLALLEADVNFKVVKDFIAKVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P ++ IV EL LMGG ++L A PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSFTPGMVVIDIVNKELTDLMGGTHTKLAKANKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVA D+YRPAAI QL +LG+Q+ VPV++ G +V P +IAK GL+ AK
Sbjct: 123 KMLQKQNHKPLLVACDIYRPAAIKQLQVLGDQLKVPVFSMGDQVSPVEIAKNGLQFAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N D VIVDTAGRL ID+A+MDELK+V+ + P E LLVVDAMTGQ+A + +F+ ++ +
Sbjct: 183 NNDYVIVDTAGRLHIDEALMDELKNVREAVGPHETLLVVDAMTGQDAVNVAESFHKQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+M+ LEPFYP+RMA RILGMGD+L+
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAAMGEKMDALEPFYPERMASRILGMGDMLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F+DFL+Q V ++G + +++ M+PG GK+
Sbjct: 303 LIEKAQAGIDADKAKEMERKMRNAEFTFDDFLEQMEQVKKLGPLDQLLDMLPGAGKMKGM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ +K + +EA++++MT EE+ KPE++ + RRKR+A SG + Q V++L+ Q
Sbjct: 363 KDLKVDDKQMGRVEAIVKSMTKEEKRKPEIINAN--RRKRIALGSGNSVQDVNRLLKQFE 420
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLEDALK 532
MR MK G+M ++ + L K
Sbjct: 421 DMRKMMKQFSGMMNPKAMKNMKKLGKGFK 449
>gi|334340367|ref|YP_004545347.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
gi|334091721|gb|AEG60061.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
Length = 451
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/435 (49%), Positives = 306/435 (70%), Gaps = 7/435 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE + LKG+ LT E++ + MR+++ ALLEADV+ VV+ FV V E+A+
Sbjct: 1 MFQGLGDRLEVIFKSLKGKGRLTAEDVSQAMREVKMALLEADVNFKVVKEFVAQVKERAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV++EL +L+GG S++ A PT+I+L GLQG GKTT + KL
Sbjct: 61 GQDVLESLSPAQQVIKIVKEELTELLGGTQSKINIASKPPTIIMLVGLQGAGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L KQG+ +LVA D+YRPAAI QL +LGEQ+ +PV+T G E P +IA+ +E+A
Sbjct: 121 AKLLSKQGRRPLLVAADIYRPAAIKQLQVLGEQLKMPVFTLGQE-NPVKIAQAAVEDANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL I++ +MDEL ++K + P E+LLVVDAMTGQEA + +FN ++G
Sbjct: 180 TGRDLVIIDTAGRLHINEELMDELANIKGTVKPHEILLVVDAMTGQEAVNVADSFNQKLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALSV++V+G PIK G GE+++ LEPF+PDRMA RILGMGD+L
Sbjct: 240 LDGIIMTKLDGDARGGAALSVRKVTGCPIKFAGMGEKLDALEPFHPDRMADRILGMGDML 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ E A ++ +KI A+F+ DFL Q + V ++G + +V+GMIPGMGK+T
Sbjct: 300 TLIEKAQANFDAEQAAKLNQKIRKADFNLEDFLDQMQQVKKLGPLEQVLGMIPGMGKLT- 358
Query: 444 AQVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q+++ EK L +EA+I +MTP ER+ PE + S R+KR+A+ SG Q ++QL+
Sbjct: 359 KQLKDQQIDEKELGQVEAIIHSMTPWERQHPERIDGS--RKKRIARGSGNRVQDINQLLK 416
Query: 501 QLFQMRVRMKNLMGV 515
Q Q + MK L G+
Sbjct: 417 QFEQTKKMMKQLSGL 431
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/437 (48%), Positives = 309/437 (70%), Gaps = 4/437 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT L + ++ + LT+E++ E +R++RRALLEADV VVR F+ AV E+A+
Sbjct: 1 MFEALTDRLTQVFQRIGRKGRLTEEDVDEALREVRRALLEADVHYTVVRDFIAAVRERAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++R + P QQ++ IV ELV+++G E L++A PT+I+L GLQG GKTT AKL
Sbjct: 61 GEEVLRSLTPAQQVIAIVHQELVRVLGSERVPLLWASQPPTIIMLVGLQGSGKTTQVAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L+K+G+ +LVA D+YRPAA++QL LG+Q +PVY GT+V P + K ++ A+
Sbjct: 121 GYHLRKEGRRPLLVAADIYRPAAVEQLRTLGKQHDLPVYDEGTKVDPVETVKHAVKVARD 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ + VI+DTAGRLQID+ MM EL+ + + PTE+LLV DAMTGQEA + F+ +
Sbjct: 181 QGYNPVIIDTAGRLQIDEPMMQELERMAEAVRPTEILLVADAMTGQEAVNVAKEFHRRLS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V G PIK +G GER++ LEPFYPDR+A RILGMGDVL
Sbjct: 241 LTGLILTKLDGDARGGAALSIRAVVGVPIKFIGTGERVDALEPFYPDRLATRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT- 442
S +EKAQ+ + QE+ +++Q+K+++ FD DFL+Q + V +MG +++++ MIPGMG++
Sbjct: 301 SLIEKAQQQISQEEGKKLQEKLLAGTFDLEDFLRQLQQVKKMGPLTQLLEMIPGMGQLLR 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
QV+ ++ K +EA+I +MTPEER P+++ S RR+R+AQ SG T +VSQL+ Q
Sbjct: 361 QQQVQISDDEYKRIEAIILSMTPEERRNPDIINYS--RRRRIAQGSGTTIAEVSQLLTQF 418
Query: 503 FQMRVRMKNLMGVMEGG 519
QM+ RM +G + G
Sbjct: 419 KQMQ-RMMAELGQLAAG 434
>gi|160892009|ref|ZP_02073012.1| hypothetical protein BACUNI_04468 [Bacteroides uniformis ATCC 8492]
gi|270296343|ref|ZP_06202543.1| signal recognition particle protein [Bacteroides sp. D20]
gi|317480461|ref|ZP_07939556.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|423303310|ref|ZP_17281309.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|423307968|ref|ZP_17285958.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
gi|156858487|gb|EDO51918.1| signal recognition particle protein [Bacteroides uniformis ATCC
8492]
gi|270273747|gb|EFA19609.1| signal recognition particle protein [Bacteroides sp. D20]
gi|316903376|gb|EFV25235.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|392688540|gb|EIY81825.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|392688953|gb|EIY82236.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
Length = 440
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 299/442 (67%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE SE+ S+P +IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETSEINL-DSKPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EAK
Sbjct: 120 ARMLKSKKNKKPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEPDSKNPVAIAQNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEEMMNEIAAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDIDIDDNAFKSIEAIIYSMTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|390934862|ref|YP_006392367.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570363|gb|AFK86768.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 446
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/428 (47%), Positives = 298/428 (69%), Gaps = 2/428 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + KL+G+ L+++++ E M++++ ALLEADV+ VV+ F+ V+E+++G
Sbjct: 3 FESLTGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P Q ++KIV DEL LMG + S++ F+ PTVI++ GLQG GKTT S KLA
Sbjct: 63 QEVMESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTVIMMVGLQGSGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYLK +GKS +LVA D+YRPAAI QL ++G + VPV++ G + P IAK ++ AK
Sbjct: 123 NYLKSKGKSPVLVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTSPVDIAKASIDFAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N +VVI+DTAGRL +D+ +MDELK++K ++P E+LLVVDAMTGQ+ + +FN ++ +
Sbjct: 183 NYNVVIIDTAGRLHVDEELMDELKNIKDAVHPDEILLVVDAMTGQDVVNVAESFNEKLDV 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALSVK V+ KPIK + GE+ D+E F+PDRMA RILGMGDVLS
Sbjct: 243 DGVILTKLDGDTRGGAALSVKAVTHKPIKFIASGEKFTDIEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A E+QKKI+ F F+DFL Q + + MG + ++ MIPG+
Sbjct: 303 LIEKAQAQIDEKKALELQKKILEQQFSFDDFLDQLQGLKNMGPIDQLFSMIPGVNMSKLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
+ ++K +K +EA+I++MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q
Sbjct: 363 GINISDKDIKRIEAIIQSMTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLLKQFEQ 420
Query: 505 MRVRMKNL 512
+ MK
Sbjct: 421 TKKMMKQF 428
>gi|357042601|ref|ZP_09104305.1| signal recognition particle protein [Prevotella histicola F0411]
gi|355369252|gb|EHG16650.1| signal recognition particle protein [Prevotella histicola F0411]
Length = 447
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 299/432 (69%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L A +RP +IL++GLQG GKTT + KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGESVGLNLA-NRPAIILMSGLQGSGKTTFTGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A+ LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGVPVY+ ++IA L EAK
Sbjct: 120 AHLLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVPVYSEPDNKNVNEIADHALAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E++ +K +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIIDTAGRLAVDEEMMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|340355026|ref|ZP_08677720.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
gi|339622823|gb|EGQ27336.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
Length = 451
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 312/432 (72%), Gaps = 8/432 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK+ G+ + + ++ E MR++R AL+EADV+L VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQGTLNKITGKGKINEADVKEMMREVRFALIEADVNLKVVKSFVKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV+DEL LMGGE + + FA+ PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVVKIVKDELTNLMGGEQNPIQFARKSPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
L KK K+ +LVA D+YRPAAI QL LG+Q+ +PV++ GT+ P +IA++ +EEA+K
Sbjct: 123 TVLRKKHNKNPLLVAADIYRPAAIQQLETLGKQISIPVFSMGTDQSPVEIARRAMEEAEK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ DVVI+DTAGRL +D+ +M ELKD++ + P EV LVVDAMTGQ+A + +F+ IG
Sbjct: 183 EHNDVVIIDTAGRLHVDEKLMQELKDIRELTKPDEVFLVVDAMTGQDAVNVAKSFDEMIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDV+
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTEKPIKFVGMGEKMDALEPFHPERMASRILGMGDVM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
S +EKAQE + +E A+E+++K+ + +F +DFL Q + V +MG + ++ M+PG KI
Sbjct: 303 SLIEKAQENVDEEKAKELEQKLRTQSFTLDDFLDQLQQVKKMGPLDEILKMMPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
A+V E + + +EA+I +MT ERE P+++ S R+KR+A SG + Q+V++L+
Sbjct: 363 LDNAKVDEGQ--MGRVEAVIYSMTLAERESPDIINAS--RKKRIAVGSGTSIQEVNRLLK 418
Query: 501 QLFQMRVRMKNL 512
Q +M+ +K +
Sbjct: 419 QFEEMKKMVKQM 430
>gi|219849542|ref|YP_002463975.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
gi|219543801|gb|ACL25539.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
Length = 450
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/431 (49%), Positives = 305/431 (70%), Gaps = 4/431 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+A + KL + LT++++ E M+ +R ALLEADV+ VV+ FV V+E+A+
Sbjct: 1 MFESLSDRLQAVFQKLGSKGVLTEDDVREAMKQVRLALLEADVNFRVVKDFVAKVTEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P QQ++KIV EL+ L+G E L A+ PTVI+L GLQG GKTT++AKL
Sbjct: 61 GEEVTKSLTPHQQVIKIVHQELINLLGTEHVPLQEARPGPTVIMLVGLQGTGKTTLAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+GK +LVA DVYRPAAI QL LG Q+ +PVY+ GT+ P IA+ LE A+K
Sbjct: 121 ALHLRKKGKRVLLVAADVYRPAAITQLQALGRQLNIPVYSEGTQASPPDIAEHALEHARK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +VVI+DTAGRLQID+ +M EL+ ++ ++PTE LLVVDAMTGQEA + TFN +
Sbjct: 181 ELFNVVIIDTAGRLQIDEPLMQELEQIEARVHPTERLLVVDAMTGQEAVRVAETFNQRVK 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGD 381
+TG ++TK+DGD+RGGAALSV+ V+G PIK + GE+++ LE F+PDR+A RILGMGD
Sbjct: 241 LTGVVMTKMDGDARGGAALSVRAVTGVPIKFLSTGEKVDGNTLEIFHPDRLASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VLS +E+A+++ E A++MQK++ FDF DFL + ++G + ++I MIPG+ ++
Sbjct: 301 VLSLIERAEQLYDAEQAKKMQKRLSKGEFDFEDFLNSLHQMRKLGPLQQIIAMIPGLNQL 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ E+ +K +EA+I +MTPEER PE++ S RR+R+A+ SG + Q+VSQLV Q
Sbjct: 361 ARNEELLDERHVKRVEAIIYSMTPEERRHPEIIKGS--RRERIARGSGTSVQEVSQLVKQ 418
Query: 502 LFQMRVRMKNL 512
QM+ MK L
Sbjct: 419 FQQMQRMMKQL 429
>gi|163847609|ref|YP_001635653.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525465|ref|YP_002569936.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
gi|163668898|gb|ABY35264.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222449344|gb|ACM53610.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
Length = 450
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/431 (49%), Positives = 305/431 (70%), Gaps = 4/431 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+A + KL + LT++++ E M+ +R ALLEADV+ VV+ FV V+EQA+
Sbjct: 1 MFESLSDRLQAVFQKLGSKGRLTEDDVREAMKQVRLALLEADVNFRVVKEFVAKVTEQAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P QQ++KIV EL+ L+G E L A+ PTVI+L GLQG GKTT++AKL
Sbjct: 61 GEEVTKSLTPHQQVIKIVHQELINLLGTENVPLQEARPGPTVIMLVGLQGTGKTTLAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+GK +LVA DVYRPAAI QL LG Q+ +PVY+ GT+ P IA+ LE A+K
Sbjct: 121 ALHLRKKGKRVLLVAADVYRPAAITQLQALGRQLNIPVYSEGTQASPPDIAEHALEHARK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +VVI+DTAGRLQID+ +M EL+ ++ ++P E LLVVDAMTGQEA + TFN +
Sbjct: 181 ELFNVVIIDTAGRLQIDEPLMQELEQIENRVHPIERLLVVDAMTGQEAVRVAETFNQRVK 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGD 381
+TG ++TK+DGD+RGGAALSV+ V+G PIK + GE+++ LE F+PDR+A RILGMGD
Sbjct: 241 LTGVVMTKMDGDARGGAALSVRAVTGVPIKFLSTGEKVDGNTLEVFHPDRLASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VLS +E+A+++ E A++MQK++ FDF DFL + ++G + ++I MIPG+ ++
Sbjct: 301 VLSLIERAEQLYDAEQAKKMQKRLSKGEFDFEDFLNSLHQMRKLGPLQQIIAMIPGLNQL 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ E+ +K +EA+I +MTPEER +PE++ S RR+R+A+ SG + Q+VSQLV Q
Sbjct: 361 ARNEELLDERHVKRVEAIIYSMTPEERRRPEIIKGS--RRERIARGSGTSVQEVSQLVKQ 418
Query: 502 LFQMRVRMKNL 512
QM+ MK L
Sbjct: 419 FQQMQRMMKQL 429
>gi|219669778|ref|YP_002460213.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
gi|219540038|gb|ACL21777.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
Length = 453
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/429 (49%), Positives = 303/429 (70%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LK + LT+ ++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSEKLQETFKRLKSKGKLTEADVNEAMREVRMALLEADVNFKVVKDFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +E+V LMGG S++ + PTVI+L GLQG GKTT AKL
Sbjct: 61 GQEVLESLSPGQQVIKIVNEEMVALMGGVSSKINISSKPPTVIMLVGLQGAGKTTHGAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LGEQ+ VPV++ G E P +IA L+ A
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLEVLGEQIKVPVFSLGQE-NPVKIAAASLQHANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +DVVI+DTAGRL I++ +M EL+++K + P E+LLVVDAMTGQ+A + +F+ E+G
Sbjct: 180 QGLDVVIIDTAGRLHINEELMGELREIKTAVKPHEILLVVDAMTGQDAVNVAESFHNELG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSVK V+G PIK G GE+M+ +EPF+P+RMA RILGMGDVL
Sbjct: 240 VDGIILTKLDGDTRGGAALSVKAVTGCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE ++ A EM++K+ F +DFL Q + + +MG ++ ++ MIPG+GK
Sbjct: 300 TLIEKAQEAFDEKQAREMEQKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QM 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ EK + +EA+I +MT EER KP L+ +S R++R+A+ SG + Q+V +L+ Q
Sbjct: 359 KDVQVDEKDMAHVEAIIHSMTAEERRKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|110639137|ref|YP_679346.1| signal recognition particle subunit FFH/SRP54 [Cytophaga
hutchinsonii ATCC 33406]
gi|110281818|gb|ABG60004.1| signal recognition particle subunit FFH/SRP54 (srp54) [Cytophaga
hutchinsonii ATCC 33406]
Length = 443
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/449 (48%), Positives = 307/449 (68%), Gaps = 7/449 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A+ LKG+ +T+ N+ ++IR+AL++ADV+ V + + E A+
Sbjct: 1 MFDNLSQKLDKAFKTLKGQGRITEINVATTAKEIRKALIDADVNYKVAKSVTDDIKEIAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q LVKI +EL KLMGGE E+ K P+VIL+AGLQG GKTT S KL
Sbjct: 61 GREVLISVSPGQLLVKITHEELTKLMGGEKQEISL-KGDPSVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A Y+KKQ ++ +LVA DVYRPAAIDQL +LGEQVGV VYT KP +I+K +E AKK
Sbjct: 120 AAYIKKQNRNVLLVACDVYRPAAIDQLKVLGEQVGVEVYTEPDNKKPVEISKNAIEYAKK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N VVI+DTAGRL ID+ MM+E+ +VK+ + P+E L VVD+MTGQ+A FN I
Sbjct: 180 NNKKVVIIDTAGRLAIDEQMMNEIAEVKKAIQPSETLFVVDSMTGQDAVNTAKAFNDRIN 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGD+RGGAA+S++ V KPIK + GE+M+ L+ FYP+RMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDTRGGAAISIRAVVEKPIKFISTGEKMDALDVFYPERMASRILGMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+V +E+ +++ +K+ F+F DFL Q + + +MGS+ ++GMIPGMGK+
Sbjct: 300 SLVERAQQVFDEEETKKLNQKLRKNQFNFEDFLNQIQQIKKMGSIKDLVGMIPGMGKMM- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + + K +EA+I +MT EERE P+LL+ + RR R+A+ SG + QQV+ L+ Q
Sbjct: 359 KDLPIDDDAFKPIEAIIFSMTKEERENPDLLSGN--RRNRIAKGSGTSIQQVNNLLKQFE 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLEDALK 532
MR MK+ M M+G +P N+++ +K
Sbjct: 417 DMRKMMKS-MNKMQGKGIPP--NMKNLMK 442
>gi|392964046|ref|ZP_10329467.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
gi|387846941|emb|CCH51511.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
Length = 439
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 297/438 (67%), Gaps = 4/438 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L A+ LKG+ +T+ N+ ++++RRAL +ADV+ V + + ++A+
Sbjct: 1 MFENLQDKLNKAFKTLKGQGRITEINVAATVKEVRRALTDADVNYKVAKDITDRIRDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
++ V P Q VKIV++EL LMGGE ++ + K P V+L+AGLQG GKTT S KL
Sbjct: 61 DRKVLISVEPGQLFVKIVQEELTDLMGGE-AQSINIKGEPAVVLIAGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A+YLKKQG++ +LVA D+YRPAAIDQL +LGEQVGV VY QIA+ G+ +A+K
Sbjct: 120 ASYLKKQGRNVLLVAADIYRPAAIDQLKVLGEQVGVEVYAEPENKNAVQIAQNGIAQARK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VVIVDTAGRL +D+AMM E+++VKR ++PTE L VVD+MTGQ+A TFN +
Sbjct: 180 TGKKVVIVDTAGRLAVDEAMMQEIENVKRAISPTETLFVVDSMTGQDAVNTAKTFNDRLN 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGD+RGGAALS+K V KPIK + GE+ME L+ FYPDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDARGGAALSIKTVVNKPIKFISTGEKMEALDVFYPDRMASRILGMGDVI 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +++A+ + K+ FDFNDFL Q + + +MG++ ++GMIPGMGK+
Sbjct: 300 SLVERAQQAFDEDEAKRINAKMRKNQFDFNDFLSQLQQIKKMGNVKDLLGMIPGMGKMIK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ S K +EA+I +MTP+ERE+PEL+ S R+KR+A SG QQV+ L+ Q
Sbjct: 360 -DLDIDNDSFKPIEAIISSMTPKERERPELIDGS--RKKRIAAGSGTDIQQVNNLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSL 521
+MR MK + + G L
Sbjct: 417 EMRKMMKKMNTMQASGKL 434
>gi|333897182|ref|YP_004471056.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112447|gb|AEF17384.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 446
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/428 (47%), Positives = 298/428 (69%), Gaps = 2/428 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + KL+G+ L+++++ E M++++ ALLEADV+ VV+ F+ V+E+++G
Sbjct: 3 FESLTGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P Q ++KIV DEL LMG + S++ F+ PTVI++ GLQG GKTT S KLA
Sbjct: 63 QEVMESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTVIMMVGLQGSGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYL+ +GKS +LVA D+YRPAAI QL ++G + VPV++ G + P IAK ++ A+
Sbjct: 123 NYLRSKGKSPVLVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTSPVDIAKASIDFARNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N +VVI+DTAGRL +D+ +MDELK++K +NP E+LLVVDAMTGQ+ + +FN ++ I
Sbjct: 183 NYNVVIIDTAGRLHVDEELMDELKNIKDAVNPDEILLVVDAMTGQDVVNVAESFNEKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALSVK V+ KPIK + GE+ D+E F+PDRMA RILGMGDVLS
Sbjct: 243 DGVILTKLDGDTRGGAALSVKAVTRKPIKFIASGEKFTDIEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + ++ A E+QKKI+ F F+DFL Q + + MG + ++ MIPG+
Sbjct: 303 LIEKAQAQIDEKKALELQKKILEQQFSFDDFLDQLQGLKNMGPIDQLFSMIPGVNMSKLK 362
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V ++K +K +EA+I++MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q
Sbjct: 363 GVNISDKDIKRIEAIIQSMTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLLKQFEQ 420
Query: 505 MRVRMKNL 512
+ MK
Sbjct: 421 TKKMMKQF 428
>gi|435853372|ref|YP_007314691.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
gi|433669783|gb|AGB40598.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
Length = 447
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 305/446 (68%), Gaps = 5/446 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLKG+ L+++++ +R+++ ALLEADV+ VV+ F+ + E+AV
Sbjct: 2 IFEGLSEKLQNAFDKLKGKGKLSEDDVKAALREVKLALLEADVNYKVVKGFISKIEERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL LMGG S++ FA + PTVI++AGLQG GKTT KL
Sbjct: 62 GHEVLDSLTPAQQVIKIVNEELTDLMGGTQSKISFASNPPTVIMMAGLQGAGKTTTVGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK QGK+ +LVAGD+YRPAAI QL +LG+++ PV++ G + P IAK + A+
Sbjct: 122 AKQLKNQGKNPLLVAGDIYRPAAIKQLQVLGDRLDQPVFSMGDKQSPVDIAKAAINNAES 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL ID+ +MDELK +K + P E+LLVVDAMTGQ+A + F+ +G
Sbjct: 182 NGHDVVIIDTAGRLHIDEELMDELKQIKSEVIPHEILLVVDAMTGQDAVNVAEEFDDALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS+ V+GKPIK VG GE++++LEPF+PDRM+ RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDARGGAALSISSVTGKPIKFVGTGEKLDNLEPFHPDRMSSRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+E M +E A+E+++K+ F DFL Q V MG + ++GMIPG GK
Sbjct: 302 SLIEKAEEQMDEERAKELEQKLREKKFTLEDFLDQLEQVRNMGPLDEILGMIPGAGK-QL 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK L +EA+I +MT EER PE++ S RR+R+A SG + QQV++L+ Q
Sbjct: 361 KNLNMDEKQLDYIEAIINSMTIEERRNPEIINGS--RRRRIAAGSGTSVQQVNRLLKQFK 418
Query: 504 QMRVRMKNLMGVMEG--GSLPALSNL 527
Q + M L +G G L NL
Sbjct: 419 QTKKMMDQLGDAQKGMAGKLKGKMNL 444
>gi|332877610|ref|ZP_08445354.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332684459|gb|EGJ57312.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 442
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 295/420 (70%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNTVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ + + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GQQVLTTLQPGQLMVKIVKDELTQLMGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAIDQL I+GEQVGVPV++ P IA +GL AK
Sbjct: 120 ANYLKTKKNKKPLLVACDVYRPAAIDQLHIVGEQVGVPVFSDKGNNNPVDIALKGLAYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +++VVIVDTAGRL +D+ MM+E+ ++ + + P E L VVDAMTGQ+A FN +
Sbjct: 180 ENHLNVVIVDTAGRLAVDEQMMNEISNIHQAIKPHETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+++K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL+Q + + RMGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 360 K-DLDIKDDAFKHIEAIIHSMTPKERSNPAIIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|56419731|ref|YP_147049.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297530628|ref|YP_003671903.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|319766210|ref|YP_004131711.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|448237352|ref|YP_007401410.1| signal recognition particle protein [Geobacillus sp. GHH01]
gi|56379573|dbj|BAD75481.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297253880|gb|ADI27326.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|317111076|gb|ADU93568.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|445206194|gb|AGE21659.1| signal recognition particle protein [Geobacillus sp. GHH01]
Length = 446
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/420 (49%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ N+++G+ +T+ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLSERLQQVMNRIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFIRQVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ AK PTV+++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKIVKEELTALMGGEQSQIAVAKKPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+K + +LVA DVYRPAAI QL LG+Q+ +PV++ G P +IAKQ LE AK+
Sbjct: 123 NLLRKRHNRKPLLVAADVYRPAAIKQLETLGKQLDMPVFSLGEHANPVEIAKQALERAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+A+MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDEALMDELKQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+G PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A F +DFL+Q V ++G + +I M+PG KI
Sbjct: 303 TLIEKAQAAVDEEKAKELEQKMRTATFTLDDFLEQLGQVRKLGPLDELIKMLPGANKIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ EK + +EA+I +MT EE+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 363 LANIQVDEKQIARVEAIIRSMTKEEKTHPEIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|311030155|ref|ZP_07708245.1| signal recognition particle protein [Bacillus sp. m3-13]
Length = 448
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 313/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ V+E+AVG
Sbjct: 3 FEGLADRLQNTIQKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKRVNERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL LMGGE S++ + PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTALMGGEQSKIAVSSRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +++AK
Sbjct: 123 NLLRKKHNRKPLLVAADIYRPAAIKQLETLGKQLSMPVFSLGDQVSPVEIAKQAIQKAKD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL +D+ +MDELK VK + NP E+ LVVDAMTGQ+A + +FN ++G
Sbjct: 183 EHHDYVLIDTAGRLHVDENLMDELKQVKEISNPDEIFLVVDAMTGQDAVNVAQSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALSVK V+ PIK +G GE+++ +EPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSVKAVTNTPIKYIGMGEKLDAIEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ + NF F+DFL+Q V MG + ++GMIPG K+
Sbjct: 303 TLIEKAQSNVDEEKAKELEQKLRTMNFTFDDFLEQLGQVRNMGPLDEILGMIPGANKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK + +EA+I++MT E++ P+L+ S R+KR+A+ SG+ Q+V++L+ Q
Sbjct: 363 LKNVQVDEKQIGHVEAIIQSMTKAEKDNPDLINAS--RKKRIAKGSGRPIQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 EEMKKMMKQM 430
>gi|414154258|ref|ZP_11410577.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454049|emb|CCO08481.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 446
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/439 (49%), Positives = 308/439 (70%), Gaps = 7/439 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ + LKG+ LT+E++ + MR+++ ALLEADV+ VV+ FV V E+AV
Sbjct: 1 MFKGLGERLDEIFKSLKGKGRLTEEDVNQAMREVKMALLEADVNFKVVKEFVAQVKERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV+DEL +L+GG +++ A PT+I+L GLQG GKTT + KL
Sbjct: 61 GQDVLASLSPAQQVIKIVKDELTELLGGTQAKINMAAKPPTIIMLVGLQGAGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L KQG+ +LVA D+YRPAAI QL +LGEQ+ +PV++ G E P +IA+ +++A
Sbjct: 121 AKLLSKQGRRPLLVAADIYRPAAIKQLQVLGEQLQIPVFSLGQE-NPVKIAQAAVDQAGS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +M EL ++K + P E+LLVVDAMTGQEA + TFN ++G
Sbjct: 180 TGKDVVIIDTAGRLHINEELMGELAEIKTAVKPHEILLVVDAMTGQEAVNVADTFNRKLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALSV++V+G PIK G GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 240 LDGIIMTKLDGDARGGAALSVRKVTGTPIKFAGMGEKLDALEPFHPDRMADRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ E A ++ KKI A+F+ DFL+Q + V ++G + +++GMIPGM K+T
Sbjct: 300 TLIEKAQANFDAEQAAKLNKKIRQADFNLEDFLEQLQQVKKLGPLEQILGMIPGMNKLT- 358
Query: 444 AQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q+++ + K L +EA+I +MTP ER+ PE + S R+KR+A+ SG Q V+QL+
Sbjct: 359 KQLKDQQLDGKELAQVEAIIYSMTPWERQHPEKIDGS--RKKRIARGSGTRVQDVNQLLK 416
Query: 501 QLFQMRVRMKNLMGVMEGG 519
Q Q R MK L + +GG
Sbjct: 417 QFEQTRKMMKQLSNMTKGG 435
>gi|34540847|ref|NP_905326.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|334146894|ref|YP_004509823.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|419969944|ref|ZP_14485463.1| signal recognition particle protein [Porphyromonas gingivalis W50]
gi|34397161|gb|AAQ66225.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|333804050|dbj|BAK25257.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|392611883|gb|EIW94605.1| signal recognition particle protein [Porphyromonas gingivalis W50]
Length = 445
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/442 (49%), Positives = 299/442 (67%), Gaps = 6/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V ++F V E+A+
Sbjct: 1 MFENLSERLDRSFKLLKGEGRITEINVAETLKDVRRALLDADVNYVVAKQFTDLVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ VRP + +VKIV DEL LMGG ++ K P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTSVRPGELMVKIVHDELAALMGGHSVDINL-KGSPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQGK +LVA DVYRPAAI QL+ILGEQ+GVPVY+ KP +IA+ + EAK
Sbjct: 120 ANMLKSKQGKRPLLVACDVYRPAAIQQLMILGEQLGVPVYSEPDSKKPVEIARHAIAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL ID+ MM E++ +K + P EVL VVD+MTGQ+A FN +
Sbjct: 180 TKGNDVVIIDTAGRLAIDEEMMREIEAIKAAIQPNEVLFVVDSMTGQDAVNTAKEFNTRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE + +A ++++KI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEREARKLEEKIAKNQFDFNDFLAQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P +L + RRKR+A SG + Q V++L+ Q
Sbjct: 360 -KDIDIDDDAFKSIEAIIYSMTPHERTHPSIL--NGQRRKRIAMGSGTSIQDVNKLITQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G +GG +P +
Sbjct: 417 DQTRKMMKTIQG-FKGGKMPKM 437
>gi|421860554|ref|ZP_16292660.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410829740|dbj|GAC43097.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 457
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/433 (48%), Positives = 304/433 (70%), Gaps = 3/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + KL+G+ +T++++ E MR++R ALLEADV+ VV+ F+ V E+AVG
Sbjct: 3 FEGLTGRLQNVFGKLRGKGKVTEDDVNEAMREVRLALLEADVNFKVVKEFINKVKEKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P +V IV EL +LMGG ++L A PTVI++AGLQG GKTT S KLA
Sbjct: 63 QEVMKSFTPGMVIVDIVNKELTELMGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVA D+YRPAAI QL +LG Q+ VPV++ G +V P +IA+Q +E A+
Sbjct: 123 KLLQKQNHKPLLVAADIYRPAAIKQLEVLGAQINVPVFSLGDQVSPVEIARQAMEHARVN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++D VIVDTAGRL ID+A+M+ELK + +NP EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HLDYVIVDTAGRLHIDEALMEELKQIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQLAL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-P 443
+EKAQ + + A+EM+ K+ +A F F+DFL+Q + V ++G + +++ MIPGM K+
Sbjct: 303 LIEKAQANIDADKAKEMEMKMRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGMNKMKQT 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
A ++ E+ + +EA++ +MT +ER+ P+++ S RRKR+A SG + V++L+ Q
Sbjct: 363 ANLKVDERQMGRIEAIVRSMTNKERQDPDMINHS--RRKRIAAGSGTSLADVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM 516
+MR MK +M
Sbjct: 421 EMRRMMKQFTEMM 433
>gi|261419395|ref|YP_003253077.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
gi|261375852|gb|ACX78595.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
Length = 469
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/420 (49%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ N+++G+ +T+ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLSERLQQVMNRIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFIRQVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ AK PTV+++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKIVKEELTALMGGEQSQIAVAKKPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+K + +LVA DVYRPAAI QL LG+Q+ +PV++ G P +IAKQ LE AK+
Sbjct: 123 NLLRKRHNRKPLLVAADVYRPAAIKQLETLGKQLDMPVFSLGEHANPVEIAKQALERAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+A+MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDEALMDELKQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+G PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A F +DFL+Q V ++G + +I M+PG KI
Sbjct: 303 TLIEKAQAAVDEEKAKELEQKMRTATFTLDDFLEQLGQVRKLGPLDELIKMLPGANKIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ EK + +EA+I +MT EE+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 363 LANIQVDEKQIARVEAIIRSMTKEEKTHPEIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|332667956|ref|YP_004450744.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336770|gb|AEE53871.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 450
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/431 (51%), Positives = 290/431 (67%), Gaps = 6/431 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L+ LE A LKGE LT+ N+ +++IRRAL++ADVS + + F V E+A+
Sbjct: 1 MLESLSERLEGALKVLKGENKLTEINVAASIKEIRRALVDADVSYKIAKEFTDRVKEKAL 60
Query: 144 GV-GLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAK 202
G +++ V P Q ++KIV DEL LMGG+ + L A +PTVIL+AGLQG GKTT S K
Sbjct: 61 GSDNVLKAVSPGQLMIKIVMDELTDLMGGQAAGLNLA-GKPTVILIAGLQGSGKTTFSGK 119
Query: 203 LANYLKKQGK-SCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
LA++LK Q K S +LVA DVYRPAA+DQL +L EQVGVPVY P QIA + ++ A
Sbjct: 120 LAHWLKTQKKKSPLLVACDVYRPAAMDQLTVLAEQVGVPVYKEPESKNPVQIALKAIQYA 179
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
+ DVVIVDTAGRL ID+ MM E+K++K + P E L VVDAMTGQ+A FN
Sbjct: 180 IEHKCDVVIVDTAGRLAIDEEMMAEIKNIKEAILPQETLFVVDAMTGQDAVNTAQVFNET 239
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
I G +LTK+DGD+RGGAALSVK GKPIK GE+M+ LE FYPDRMA RILGMGD
Sbjct: 240 INFDGVVLTKMDGDTRGGAALSVKYTVGKPIKFASTGEKMDALELFYPDRMAQRILGMGD 299
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
++SFVEKAQE +E A++++KKI FDFNDF+ Q + +MG + ++GMIPGM K+
Sbjct: 300 IVSFVEKAQEQFDEELAKKLEKKIQKNKFDFNDFMAQINQIKKMGDLKSIMGMIPGMDKL 359
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
T V + K +EA+I++MTP+ER P+LL S R++R+A+ G+T V+ + Q
Sbjct: 360 T-RNVEIDNNAFKKVEAIIQSMTPKERTNPDLLNMS--RKQRIAKGCGRTLNDVNMFIKQ 416
Query: 502 LFQMRVRMKNL 512
QMR M N+
Sbjct: 417 FEQMRKMMHNM 427
>gi|452991209|emb|CCQ97464.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/427 (49%), Positives = 296/427 (69%), Gaps = 2/427 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A KL+G+ L+++++ MR++R ALLEADV+ VV+ FV+ V E+A+
Sbjct: 2 VFESLSEKLQNALGKLRGKGKLSEKDVDLAMREVRLALLEADVNFKVVKDFVKRVKERAI 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ+VKIV +EL KLMG + S+L FA + PTVIL+ GLQG GKTT + KL
Sbjct: 62 GSEVMESLTPGQQVVKIVNEELTKLMGEKESKLNFASTPPTVILMCGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LK Q K +LV DVYRPAAI QL ++GE+VGVPV+T G + P IAK +E K+
Sbjct: 122 ANNLKIQSKRPLLVVCDVYRPAAIKQLEVVGERVGVPVFTMGDKNNPVDIAKAAVEHGKR 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N D +I+DTAGRL ID +MDEL+ + +NP E+LLVVDAMTGQ+A + TFN +
Sbjct: 182 NNNDCIIIDTAGRLHIDDDLMDELEGIYNGVNPQEILLVVDAMTGQDAVNVAETFNERLE 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 242 ITGVVLTKLDGDARGGAALSIRAVTEKPIKFVGMGEKLDQLEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +E+AQ + ++ A E++KKI S F +DFL+Q + +G + ++GMIPG+
Sbjct: 302 SLIERAQSSIDEKKALELEKKIKSQQFTLDDFLEQIDQMKNLGPLDELLGMIPGVNSKAL 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK + ++A+I++MTP+ER P ++ RRKR+A SG T Q V++L+ Q
Sbjct: 362 KNLDVNEKDIIKIQAIIQSMTPQERNDPSIIDSK--RRKRIANGSGTTVQDVNKLLKQFR 419
Query: 504 QMRVRMK 510
+ MK
Sbjct: 420 DTKKMMK 426
>gi|193216162|ref|YP_001997361.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
gi|193089639|gb|ACF14914.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
Length = 449
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/437 (49%), Positives = 306/437 (70%), Gaps = 5/437 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A KL G+ + + NI MRDI+RALL+ADV+ V + FV+ V +QA+
Sbjct: 1 MFESLSDKLEHALKKLSGQAKINEINIGMAMRDIKRALLDADVNYKVTKNFVEQVRKQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAK 202
G +I+ V P Q +VKIV DELVK MGGE ++ SR P VI++AGLQG GKTT +AK
Sbjct: 61 GEEVIKSVSPAQMIVKIVHDELVKAMGGEQKDINLKTSRMPAVIMVAGLQGSGKTTFTAK 120
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LAN LKK+G++ +L+A DVYRPAAI+QL LG Q+GVPV++ E + AKQG+E AK
Sbjct: 121 LANLLKKKGRAPLLIAADVYRPAAIEQLKTLGAQIGVPVFSI-EEKDALKAAKQGIEFAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ + +V IVDTAGRLQID+ MM E + +KR L+P E+L VVD+M GQEA FN +
Sbjct: 180 QNSKNVAIVDTAGRLQIDEEMMAEAERLKRELSPEEILFVVDSMIGQEAVNTAKVFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTK+DGD+RGGAALS+K V KPIK + +GE+++DL+ FYP+RMA RILGMGD+
Sbjct: 240 DFDGVVLTKMDGDTRGGAALSIKTVVDKPIKFLSQGEKVDDLDIFYPERMAQRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+SFVEKAQE + E +++QK+++ F+ DF +Q + + +MGS+ +I MIPG+ K+
Sbjct: 300 VSFVEKAQETLDLEKTQKLQKRLIENEFNLEDFYEQLQELKKMGSLQNLIDMIPGLSKVV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
P Q + E +LK++EA+I +MT +ER+KP ++ S RR R+A+ SG Q V+ L+ Q
Sbjct: 360 PKQEID-ESNLKVIEAIINSMTKDERQKPGIINGS--RRSRIAKGSGTRVQDVNMLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGG 519
+M+ MK++ + + G
Sbjct: 417 MEMKKMMKSVTKMAKSG 433
>gi|402818507|ref|ZP_10868090.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
gi|402503973|gb|EJW14505.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
Length = 460
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/433 (48%), Positives = 304/433 (70%), Gaps = 3/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L+ ++KL+G+ ++++++ E MR++R ALLEADV+ VV+ F+ V E+AVG
Sbjct: 3 FEGLTSRLQNVFSKLRGKGKVSEDDVNEAMREVRLALLEADVNFKVVKEFIGKVKEKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P ++ IV EL +LMGG ++L A PTVI++ GLQG GKTT S KLA
Sbjct: 63 QEVMQSFTPGMVIIDIVNKELTELMGGTAAKLAKANKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVA D+YRPAAI QL ++GEQ+ VPV+ G +V P +IA++GLE AK+
Sbjct: 123 KMLQKQNHKPLLVAADIYRPAAIKQLQVVGEQIKVPVFALGDQVSPVEIARRGLEHAKEN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++D VI+DTAGRL ID+A+M+ELK V P EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HLDYVIIDTAGRLHIDEALMEELKQVHATAKPDEVLLVVDAMTGQDAVNVADSFNQQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+M+ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKMDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP- 443
+EKAQ + E A+EM+ K+ +A F F+DFL+Q + V ++G + +++ MIPGM K+
Sbjct: 303 LIEKAQANIDTEKAKEMEMKMRNAAFTFDDFLEQMQQVKKLGPIDQILDMIPGMNKMKQN 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
A ++ E+ + +EA++ +MT EER+ P+L+ S RRKR+A SG V++L+ Q
Sbjct: 363 ANLKVDERQMGRIEAIVRSMTNEERQDPDLINHS--RRKRIAAGSGTALADVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM 516
+MR MK +M
Sbjct: 421 EMRRMMKQFSDMM 433
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/448 (48%), Positives = 303/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + +Q+ VPV+ GT+V P +I ++G+E AKK
Sbjct: 123 LRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLN 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAA+S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ FD+NDFL Q V +MG + +I M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K + A++ +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNLNLDPKQFAHIRAIVLSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-------NLMGVMEGGSLP 522
QMR MK N M M GG +P
Sbjct: 420 FNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|125973288|ref|YP_001037198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Clostridium
thermocellum ATCC 27405]
gi|256003768|ref|ZP_05428756.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281417492|ref|ZP_06248512.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|385778800|ref|YP_005687965.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|419723183|ref|ZP_14250318.1| signal recognition particle protein [Clostridium thermocellum AD2]
gi|419724913|ref|ZP_14251968.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|125713513|gb|ABN52005.1| signal recognition particle protein [Clostridium thermocellum ATCC
27405]
gi|255992329|gb|EEU02423.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281408894|gb|EFB39152.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|316940480|gb|ADU74514.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|380771533|gb|EIC05398.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|380780950|gb|EIC10613.1| signal recognition particle protein [Clostridium thermocellum AD2]
Length = 446
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 298/416 (71%), Gaps = 2/416 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A KL+G+ +T++++ E MR+I+ ALLEADV+ VV+ F+ VSE+AV
Sbjct: 2 LFEGLSGKLQEAMKKLRGKGRVTEKDVKEMMREIKLALLEADVNFKVVKDFIGKVSERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL+ LMG S++ F+ PT+ ++ GLQG GKTT S KL
Sbjct: 62 GQEVLESLTPGQQVIKIVHEELINLMGSANSKVTFSSKPPTIYMMVGLQGSGKTTTSGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQGK +LVA DVYRPAAI QL ++G Q+G+ V++ G + P IAK +E AK
Sbjct: 122 ANLLRKQGKKPLLVACDVYRPAAIKQLQVVGSQLGIEVFSMGDKTNPVDIAKAAVEYAKS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+VI+DTAGRL I++ +M+EL+++K + P E+LLVVD+MTGQ+A + +FN ++G
Sbjct: 182 RQYDLVIIDTAGRLHINEELMEELQNIKEAVRPQEILLVVDSMTGQDAVNVAESFNEKLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSVK V+GKPIK +G GE++ D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGIILTKLDGDTRGGAALSVKAVTGKPIKFIGMGEKLNDIEPFFPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE ++ A E++KK+ + F DFL+Q + + +MG +++++ MIPG
Sbjct: 302 SLIEKAQEAFDEKKALELEKKMRTQQFTLEDFLEQMQQIKKMGPLNQLLAMIPGFNANVM 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ EK + +EA+I++MT EER P ++ S RRKR+A SG T Q+V++L+
Sbjct: 362 KDIELDEKKMARVEAIIKSMTKEERNNPSIINGS--RRKRIAAGSGTTVQEVNKLL 415
>gi|372324774|ref|ZP_09519363.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
gi|366983582|gb|EHN58981.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
Length = 501
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 310/493 (62%), Gaps = 28/493 (5%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS ++ A L G+ +++ ++ E +R+IR ALLEADV+L + R F+ V E+A+G
Sbjct: 3 FENLTSRIQTAMKNLSGKGKVSEGDLDETLREIRLALLEADVNLKIARSFIAQVREKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P +Q++KIV D+L +MG + L + PTVI++AGLQG GKTT AKLA
Sbjct: 63 AKVLEGLNPSEQIIKIVNDQLTDMMGAQAVPLNKSPKIPTVIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK + +L+A DVYRPAAI+QL LG Q+ +PV+ GT+V P QI K GL++A +
Sbjct: 123 NKLKNDNHARPLLIAADVYRPAAIEQLQTLGRQLSIPVFDQGTDVDPRQIVKDGLKQADQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V +DTAGRLQID+ +M ELKD++++ P E+LL VDAMTGQ A FN +G
Sbjct: 183 EKNDYVFIDTAGRLQIDELLMQELKDIEKIAKPDEILLTVDAMTGQNATETAQGFNDALG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDIL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ + + A +K+ +FDFNDFL Q + V MG M ++ MIPGM
Sbjct: 303 SLIEKTQKDVDAKQAAAQLQKLQENSFDFNDFLDQLKQVQNMGPMEDMLKMIPGMANNAA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
AQV+ K MEA++ +MTP ER PELL SP RR+R+A SG+ V++++ Q
Sbjct: 363 LAQVQVGPKDFAHMEAIVYSMTPAERLDPELL--SPARRRRIAAGSGRPVIDVNKMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPAS--- 559
QMR M G LPA +ED L + G DPA
Sbjct: 421 KQMRQMMYKFTN--GKGGLPA--GMEDMLSGVDPSALGA--------------DPAQMGG 462
Query: 560 ---TRPSPRGFGG 569
+ P+ GFGG
Sbjct: 463 MMPSFPNQGGFGG 475
>gi|189459673|ref|ZP_03008458.1| hypothetical protein BACCOP_00301 [Bacteroides coprocola DSM 17136]
gi|189433632|gb|EDV02617.1| signal recognition particle protein [Bacteroides coprocola DSM
17136]
Length = 441
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/432 (49%), Positives = 295/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL KLMGG+ +E+ K RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTKLMGGDTAEIEL-KGRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +LG+Q+ VPVY P QIA ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLKVLGQQIEVPVYCELDSKDPVQIALNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E++ +K +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIEAIKNAINPDETLFVVDSMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIQKNQFDFNDFLTQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER PE+L + RR R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERTHPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|188995069|ref|YP_001929321.1| signal recognition particle protein [Porphyromonas gingivalis ATCC
33277]
gi|188594749|dbj|BAG33724.1| signal recognition particle protein [Porphyromonas gingivalis ATCC
33277]
Length = 445
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/442 (49%), Positives = 299/442 (67%), Gaps = 6/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V ++F V E+A+
Sbjct: 1 MFENLSERLDRSFKLLKGEGRITEINVAETLKDVRRALLDADVNYVVAKQFTDLVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ VRP + +VKIV DEL LMGG ++ K P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTSVRPGELMVKIVHDELAALMGGHSVDINL-KGSPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQGK +LVA DVYRPAAI QL+ILGEQ+GVPVY+ KP +IA+ + EAK
Sbjct: 120 ANMLKSKQGKRPLLVACDVYRPAAIQQLMILGEQLGVPVYSEPDSKKPVEIARHAIAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL ID+ MM E++ +K + P EVL VVD+MTGQ+A FN +
Sbjct: 180 TKGNDVVIIDTAGRLAIDEEMMREIEAIKAAIQPNEVLFVVDSMTGQDAVNTAKEFNTRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ + KPIK VG GE+ME ++ F+P+RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRSIVNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE + +A ++++KI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEREARKLEEKIAKNQFDFNDFLAQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P +L + RRKR+A SG + Q V++L+ Q
Sbjct: 360 -KDIDIDDDAFKSIEAIIYSMTPHERTHPSIL--NGQRRKRIAMGSGTSIQDVNKLITQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G +GG +P +
Sbjct: 417 DQTRKMMKTIQG-FKGGKMPKM 437
>gi|423074815|ref|ZP_17063539.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
gi|361854318|gb|EHL06402.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
Length = 453
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/429 (49%), Positives = 303/429 (70%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LK + LT+ ++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSEKLQETFKRLKSKGKLTEADVNEAMREVRMALLEADVNFKVVKDFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +E+V LMGG S++ + PTVI+L GLQG GKTT AKL
Sbjct: 61 GQEVLESLSPGQQVIKIVNEEMVALMGGVSSKINISSKPPTVIMLVGLQGAGKTTHGAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LGEQ+ VPV++ G E P +IA L+ A
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLEVLGEQIKVPVFSLGQE-NPVKIAAASLQHANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +DVVI+DTAGRL I++ +M EL+++K + P E+LLVVDAMTGQ+A + +F+ E+G
Sbjct: 180 QGLDVVIIDTAGRLHINEELMGELREIKVSVKPHEILLVVDAMTGQDAVNVAESFHNELG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSVK V+G PIK G GE+M+ +EPF+P+RMA RILGMGDVL
Sbjct: 240 VDGIILTKLDGDTRGGAALSVKAVTGCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE ++ A EM++K+ F +DFL Q + + +MG ++ ++ MIPG+GK
Sbjct: 300 TLIEKAQEAFDEKQAREMEQKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QM 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ EK + +EA+I +MT EER KP L+ +S R++R+A+ SG + Q+V +L+ Q
Sbjct: 359 KDVQVDEKDMAHVEAIIHSMTAEERRKPALIKDS--RKRRIAKGSGTSIQEVGRLLKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|222528961|ref|YP_002572843.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222455808|gb|ACM60070.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
Length = 443
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/429 (48%), Positives = 298/429 (69%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +L+G+ LT+++I + M++++ ALLEADV+ VV+ F+ V+++AV
Sbjct: 1 MFSSLSEKLQDVFKRLRGKGKLTEKDIKDAMKEVKLALLEADVNYKVVKDFINTVTQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DE+V L+GG ++L F+ S + ++ GLQG GKTT + KL
Sbjct: 61 GEEVLESLTPAQQVIKIVYDEMVNLLGGSDTKLTFSPSGFSTYMMVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK+QGK+ +LVA D+YRPAAI QL ++ ++VGV + +IAK+G+E AK
Sbjct: 121 AGLLKRQGKNPLLVACDIYRPAAIKQLEVVAQKVGVKCFADYNSKDAVKIAKEGIEFAKV 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DV IVDTAGRL I++ +MDEL +K + PTE+LLV+DAMTGQ+A + FN ++G
Sbjct: 181 SRCDVAIVDTAGRLHINQELMDELVAIKNAIKPTEILLVLDAMTGQDAVNVAAAFNEQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L
Sbjct: 241 IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + Q+ AEE++KK+ S F DFL Q + + +MGS+S++I MIPG+
Sbjct: 301 TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGSLSQIISMIPGVKLKGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MT EER+ P ++ S R++R+A SG T Q V++L+ Q
Sbjct: 361 VDFDAGEKELKKIEAIINSMTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLRQFE 418
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 419 DMKRMMKQF 427
>gi|170758261|ref|YP_001787761.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169405250|gb|ACA53661.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 449
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/422 (48%), Positives = 306/422 (72%), Gaps = 3/422 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A KL+G+ L++++I E MR+++ ALLEADV+ VV+ F+++V+E+ +G
Sbjct: 3 FDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKCMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL +LMG S L + S TVI+L GLQG GKTT++ KLA
Sbjct: 63 NEVLGSLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA DVYRPAAI QL ++G+Q+ +PV+T G ++ P I+K +E AK
Sbjct: 123 LHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEELMDELHNIKGEVNPSEILLVVDAMTGQDAVNVANNFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + +E A+E+ +++++ F+F DFL+ + + ++G +++++ M+PGM ++
Sbjct: 303 LIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMMPGMNSKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +EK +K EA+I +MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 363 NIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLLKD- 421
Query: 503 FQ 504
FQ
Sbjct: 422 FQ 423
>gi|340346556|ref|ZP_08669679.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433651816|ref|YP_007278195.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|339611486|gb|EGQ16311.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433302349|gb|AGB28165.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
Length = 454
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLTDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNFKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DELVKLMGGE +EL RP V+L++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELVKLMGGEAAELNLT-GRPAVVLMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K +LVA DVYRPAAI+QL ++ Q+ VPVY+ + ++IA ++EAK
Sbjct: 120 ANMLKSKQNKKPLLVACDVYRPAAIEQLKVVAAQLDVPVYSEDGNKQVNEIALHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E+ +K ++P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIIDTAGRLAVDEEMMNEIASLKETVHPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS++ V KPIK +G GE+M+ ++ F+PDRMA RILGMGDV
Sbjct: 240 DFDGVILTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMDAIDVFHPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP+ER PE+L +S RR R+A+ SG + Q+V++L+ Q
Sbjct: 360 -KDVDIDDNAFKGIEAIIRSMTPKERVNPEILNQS--RRLRIAKGSGTSIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|283798055|ref|ZP_06347208.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|291074194|gb|EFE11558.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|295091808|emb|CBK77915.1| signal recognition particle protein [Clostridium cf.
saccharolyticum K10]
Length = 452
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 304/432 (70%), Gaps = 9/432 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + L G+ L++ ++ +R+++ ALLEADVS VV++F+ +V E+AVG
Sbjct: 3 FESLADKLQNVFKNLTGKGRLSEADVKAGLREVKMALLEADVSFKVVKQFINSVQERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP----TVILLAGLQGVGKTTVS 200
++ G+ P Q ++KIV +ELVKLMG E++E+ RP TVIL+AGLQG GKTT +
Sbjct: 63 QDVLNGLNPGQMVIKIVNEELVKLMGSEMTEIAL---RPANEITVILMAGLQGAGKTTTT 119
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
AK+A LK +G+S +L A D+YRPAAI+QL I GE+ GVPV++ GT KP IAK +E
Sbjct: 120 AKIAGKLKAKGRSPLLAACDIYRPAAIEQLKINGEKQGVPVFSMGTGHKPVNIAKAAIEH 179
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
A K +VVI+DTAGRL ID+ MM+EL ++K ++ + LL+VDAMTGQ+A + FN
Sbjct: 180 AAKNGNNVVILDTAGRLHIDEDMMNELVEIKENVSVDQTLLIVDAMTGQDAVNVAGMFND 239
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
+IGI G ILTK+DGD+RGGAALS+K V+GKPI VG GE++ DLE FYPDRMA RILGMG
Sbjct: 240 KIGIDGVILTKMDGDTRGGAALSIKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMG 299
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
D++S ++KA V+ +E A+E+ +K+ A FD+NDFL Q R + +MG M+ ++ M+PGM +
Sbjct: 300 DIMSIIDKATAVIDEEKAKELSQKLKKAEFDYNDFLDQMRQIKKMGGMASILNMMPGMNQ 359
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ + EK ++ +EA+I +MT EER P+L+ +P R+KR+A+ +G +V++LV
Sbjct: 360 LKDVDLDGNEKVMERVEAIILSMTKEERSNPDLI--NPSRKKRIARGAGVDIAEVNRLVK 417
Query: 501 QLFQMRVRMKNL 512
Q QM+ MK L
Sbjct: 418 QFEQMKKMMKQL 429
>gi|116492613|ref|YP_804348.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|421894393|ref|ZP_16324882.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
gi|116102763|gb|ABJ67906.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|385272697|emb|CCG90254.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
Length = 476
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 303/446 (67%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ ++ + MR+IR ALLEADV+ VV++FV+ V +QA+G
Sbjct: 3 FEGLTERLQKTFTNLRKKGKVTEADLRDTMREIRLALLEADVNFKVVKQFVKTVRDQAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VK+V DEL+K+MG E + L + PT+I+++GLQG GKTT + KLA
Sbjct: 63 SDILDGLNPAQQIVKLVNDELIKMMGTEDAPLNKSPKIPTIIMMSGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + K+ +L+A DVYRPAAIDQLV +G+Q+ VPVY GT+V P I + GLE+A +
Sbjct: 123 LKLKNEQKARPLLIAADVYRPAAIDQLVQVGQQIDVPVYQEGTDVNPVDIVRHGLEQAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M EL D+K + +P E+LLVVDAMTGQ A FN ++
Sbjct: 183 NKNDYVFIDTAGRLQIDEKLMQELADIKALAHPDEILLVVDAMTGQNAVNTAEGFNEKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRSVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EK Q+ Q+ A EM +KI FDFNDF+ Q V MG + ++ MIPGM P
Sbjct: 303 TLIEKTQKDFDQKQAAEMTQKIRENTFDFNDFVDQLNQVQNMGPIEDIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K L+ +A++ +MT ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 362 AMQNVNVDPKDLEHTKAIVYSMTKAERENPDLL--NPSRRRRIAAGSGRPVVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M M G+ + +
Sbjct: 420 FNQ----MKKMMNQMSKGNFNGMEGM 441
>gi|423222601|ref|ZP_17209071.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
gi|392641888|gb|EIY35661.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
Length = 439
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ + +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEIDL-EGKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+GVP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNKKPLLVACDVYRPAAIEQLCVLAEQIGVPIYSEPDSKNPVKIAENAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEEMMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P LL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|354559586|ref|ZP_08978833.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353541223|gb|EHC10692.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 465
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/429 (49%), Positives = 300/429 (69%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LKG+ LT+E++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSDKLQETFKRLKGKGKLTEEDVSEAMREVRMALLEADVNYKVVKEFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +E+V LMG S++ + PTVILL GLQG GKTT +AKL
Sbjct: 61 GQEVLESLSPAQHVIKIVNEEMVALMGSVSSKINISSKPPTVILLVGLQGAGKTTHAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK ++VA D+YRPAA+ QL +LGEQ+ VPV++ E P +IA++ + A
Sbjct: 121 ATLLKKQGKHPLMVACDIYRPAAVKQLQVLGEQIKVPVFSIDGE-NPVKIAQESIRHANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ DVVI+DTAGRL I++ +M EL+D+K + P E+LLVVDAMTGQ+A + +F+ E+G
Sbjct: 180 QGQDVVIIDTAGRLHINEELMGELRDIKATVRPHEILLVVDAMTGQDAVNVAESFHSELG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V+G PIK G GE+ME LEPFYP+RMA RILGMGDVL
Sbjct: 240 VDGIILTKLDGDTRGGAALSIKAVTGCPIKFAGIGEKMEALEPFYPERMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ ++ A EM++K+ F +DFL Q + + +MG +S ++ MIPG+GK
Sbjct: 300 TLIEKAQSAFDEKQAREMEQKLRKQEFTLDDFLDQMQQIKKMGPLSSILEMIPGVGK-QL 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ EK +EA+I +MT EER KP ++ +S R++R+A+ SG + Q+V +L+ Q
Sbjct: 359 KDVQIDEKDTAHVEAIIRSMTTEERRKPAIIKDS--RKRRIAKGSGTSIQEVGRLIKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|282859593|ref|ZP_06268697.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|424899550|ref|ZP_18323092.1| signal recognition particle protein [Prevotella bivia DSM 20514]
gi|282587644|gb|EFB92845.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|388591750|gb|EIM31989.1| signal recognition particle protein [Prevotella bivia DSM 20514]
Length = 453
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/447 (48%), Positives = 304/447 (68%), Gaps = 5/447 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V +A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKTKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VK+V DEL LMGGE L SRP +IL++GLQG GKTT + KL
Sbjct: 61 GMNVLTAVKPGQLMVKLVHDELADLMGGEAVGLKLT-SRPAIILMSGLQGSGKTTFTGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAI+QL ++GEQV VPVY+ ++IA + EAK
Sbjct: 120 ANMLKAKEHKTPLLVACDVYRPAAIEQLKVVGEQVNVPVYSEPENKNVNEIATHAIAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL ID+ MM+E++ +K +NP E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIIDTAGRLAIDEDMMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P+RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L + VR++R+A+ SG Q+V++LV Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEIL--NNVRKQRIAKGSGTNLQEVNRLVKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLED 529
Q R MK + G G + + +L++
Sbjct: 417 DQTRKMMKMVTGSKMAGMMSKMKDLKN 443
>gi|403383367|ref|ZP_10925424.1| signal recognition particle-like (SRP) component [Kurthia sp. JC30]
Length = 455
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/452 (49%), Positives = 322/452 (71%), Gaps = 11/452 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ K+KG+ +T++++ MR++R AL+EADV+L VV++FV++VSE+AVG
Sbjct: 3 FEGLSERLQNTIAKIKGKGKVTEQDVKIMMREVRFALIEADVNLKVVKKFVKSVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S + F+ PTVI++ GLQG GKTT + KLA
Sbjct: 63 ADVMQSLTPGQQVIKIVQEELTALMGGEQSPVKFSNRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK K +LVA DVYRPAA+ QL LG+Q+ +PV+ GTEV P IA+ +E AK+
Sbjct: 123 NVLRKKYNKKPLLVAADVYRPAAVKQLQTLGKQLSIPVFEKGTEVSPVDIARDAIEFAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ DVVI+DTAGRL ID+A+M ELKD++ + P EV LVVDAMTGQ+A + +FN +G
Sbjct: 183 EHHDVVIIDTAGRLHIDEALMQELKDIRALKEPDEVFLVVDAMTGQDAVNVAESFNDAVG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTEKPIKFVGMGEKMDALEPFHPERMAQRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++K + +F F+DFL Q V +MG + +I MIPGM K+
Sbjct: 303 SLIEKAQETVDAEKAKELEEKFKTQSFTFDDFLDQMSQVKKMGPLEDIIKMIPGMNKVKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K + +EA+I++MT ER PE++ S RRKR+A SG++ Q+V++L+ Q
Sbjct: 363 LDKMNFDDKQINHIEAIIQSMTIAERTNPEIITSS--RRKRIALGSGRSVQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVME--GG-----SLPALSNL 527
+M+ MK + G+M GG LP + +L
Sbjct: 421 DEMKKMMKQMSGMMNPAGGKKKKFKLPGMDSL 452
>gi|330996193|ref|ZP_08320083.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
gi|329573697|gb|EGG55288.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
Length = 451
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 294/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGGE +EL + P+VIL+AGL G GKTT+S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELATLMGGETAELNL-QGHPSVILMAGLNGAGKTTLSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K+ +L A D+YRPAAI+QL +LGEQ+G+PVY+ QIA+ ++EAK
Sbjct: 120 ALMLKSKKRKNPLLAACDIYRPAAIEQLKVLGEQIGIPVYSEPDNKDAVQIAQNAVKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM E+ +K +NP E L VVDAMTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEQMMQEIAAIKHGINPDETLFVVDAMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKMEAIDQFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE +E+A +QKKI FDFNDF+ Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVEKAQEQYDEEEARRLQKKIAKNQFDFNDFMSQIQQIKKMGNLKDLASMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDVEIDDNAFKSIEAIIQSMTPRERTNPEILNTS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|138894717|ref|YP_001125170.1| Signal recognition particle subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
gi|134266230|gb|ABO66425.1| Signal recognition particle, subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
Length = 455
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/425 (48%), Positives = 307/425 (72%), Gaps = 4/425 (0%)
Query: 80 VRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVS 139
V A F L+ L+ N+++G+ +T+ ++ E MR++R ALLEADV+ VV+ F++ VS
Sbjct: 7 VNAMAFEGLSERLQHVMNRIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFIKRVS 66
Query: 140 EQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
E+AVG +++ + P QQ++K+V++EL LMGGE S++ AK PTV+++ GLQG GKTT
Sbjct: 67 ERAVGQEVLKSLTPGQQVIKVVKEELTALMGGEQSKIAVAKKPPTVVMMVGLQGAGKTTT 126
Query: 200 SAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+ KLAN L+K + +LVA DVYRPAAI QL LG+Q+ +PV++ G P +IAKQ L
Sbjct: 127 TGKLANLLRKRHNRKPLLVAADVYRPAAIKQLETLGKQLNMPVFSLGEHANPVEIAKQAL 186
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E AK+++ D V++DTAGRL +D+A+MDELK ++ + P E+ LVVDAMTGQ+A + +F
Sbjct: 187 ERAKEEHHDYVLIDTAGRLHVDEALMDELKQMREAVKPDEIFLVVDAMTGQDAVNVAQSF 246
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
+ ++GITG ILTKLDGD+RGGAALS++ V+G PIK VG GE+++ LEPF+P+RMA RILG
Sbjct: 247 HEQLGITGVILTKLDGDTRGGAALSIRAVTGAPIKFVGMGEKLDALEPFHPERMASRILG 306
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGDVL+ +EKAQ + +E A+E+++K+ +A F F+DFL Q V ++G + ++ M+PG
Sbjct: 307 MGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTFDDFLDQLGQVRKLGPLDEILKMLPGA 366
Query: 439 GKITPA-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQ 497
KI ++ EK + +EA+I +MT EE+ PE++ S R+KR+A+ SG T Q+V++
Sbjct: 367 NKIKGLDNIQVDEKQIARVEAIIRSMTKEEKMHPEIINGS--RKKRIAKGSGTTVQEVNR 424
Query: 498 LVAQL 502
L+ Q
Sbjct: 425 LLKQF 429
>gi|352516955|ref|YP_004886272.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
gi|348601062|dbj|BAK94108.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
Length = 475
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/450 (47%), Positives = 314/450 (69%), Gaps = 10/450 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FENLTDRLQQAMKKLRKKGKISESDVKEMMREIRLALLEADVNLQVVKDFTKNVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL K +G E L A PTVI++AGLQG GKTT + KLA
Sbjct: 63 AEVLESLSPAQQIVKIVDEELTKTLGSEAVGLNKAPKIPTVIMMAGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L K + M++AGDVYRPAA+DQL +LG+Q+ VPV+ GTE P +I +QG+E A +
Sbjct: 123 NHLIKNENARPMMIAGDVYRPAAVDQLKVLGQQLDVPVFEMGTEESPVEIVRQGMELAHE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL +D+A+M+EL+D+K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHVDEALMEELQDIKDIAQPNEILLVVDAMTGQDAVNVAESFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G ++TKLDGD+RGGAALS++ V+G PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ISGVVITKLDGDTRGGAALSIRSVTGAPIKFTGIGEKLTDMEVFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEEM +K+ FDFNDF++Q ++ MGSM ++ MIPGM ++ P
Sbjct: 303 TLIEKAQQDYDEQRAEEMAEKMRENTFDFNDFIEQMDQLSNMGSMEDIMKMIPGMNQM-P 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V+ K ++ +AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 362 GIDNVQFDPKDMERKKAMVYSMTPAEREDPDLL--NPSRRRRIAAGSGNSVIEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNLEDAL 531
+ R +M M G++ ++ ++ L
Sbjct: 420 FKESR----KMMQQMSKGNMDSIPGMDQML 445
>gi|345884305|ref|ZP_08835714.1| signal recognition particle protein [Prevotella sp. C561]
gi|345042866|gb|EGW46957.1| signal recognition particle protein [Prevotella sp. C561]
Length = 515
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/451 (48%), Positives = 304/451 (67%), Gaps = 11/451 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 66 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 125
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L + RP++IL++GLQG GKTT S KL
Sbjct: 126 GMNVLTAVKPGQLMVKIVHDELAELMGGEAVGLNLS-GRPSIILMSGLQGSGKTTFSGKL 184
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGV VY+ ++IA L EAK
Sbjct: 185 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVAVYSEPENKNVNEIADHALAEAK 244
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E++ +K ++P E L VVD+MTGQ+A FN +
Sbjct: 245 AKGNDVVIIDTAGRLAVDEEMMNEIESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRL 304
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 305 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDV 364
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 365 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 424
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 425 -RDVDIDDNAFKGIEAIIQSMTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQF 481
Query: 503 FQMRVRMKNLMGVMEGG------SLPALSNL 527
Q R MK + G G +P + N+
Sbjct: 482 DQTRKMMKMVTGSKMAGMMSKMKGMPGMPNM 512
>gi|436835876|ref|YP_007321092.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
gi|384067289|emb|CCH00499.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
Length = 439
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/441 (48%), Positives = 299/441 (67%), Gaps = 4/441 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L S L+ A+ LKG+ +T+ N+ ++++RRAL +ADV+ V + V E+A+
Sbjct: 1 MFENLQSKLDKAFKTLKGQGRITEINVAATVKEVRRALTDADVNYKVAKDVTDRVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
++ V P Q VKIV++EL LMGGE ++ + K P V+L+AGLQG GKTT S KL
Sbjct: 61 DRKVLIAVEPGQLFVKIVQEELTDLMGGE-AQPINLKGDPAVVLIAGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A+Y+KKQG++ +LVA D+YRPAAIDQL +LGEQVGV VY+ QIA+ + AKK
Sbjct: 120 ASYIKKQGRNVLLVACDIYRPAAIDQLKVLGEQVGVEVYSEPDNKNAVQIAQNAISHAKK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N +VIVDTAGRL +D+AMM E++ VK+ +NP+E L VVD+MTGQ+A TFN +
Sbjct: 180 TNKKIVIVDTAGRLAVDEAMMQEIEQVKKAINPSETLFVVDSMTGQDAVNTAKTFNDRLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGD+RGGAALS++ V KPIK + GE+ME L+ FYPDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDARGGAALSIRAVVSKPIKFMSTGEKMEALDVFYPDRMASRILGMGDVI 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ ++A + K+ FDFNDFL Q + + +MG++ ++GMIPGMGK+
Sbjct: 300 SLVERAQQAFDDDEARRINAKMRKNQFDFNDFLSQLQQIKKMGNIKDLLGMIPGMGKMVK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ S +EA+I +MTP+ERE+P+++ +S R++R+A SG +EQQV+ L+ Q
Sbjct: 360 -DLDLDNASFAPIEAIISSMTPKERERPDMIDKS--RKRRIALGSGTSEQQVTNLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSLPAL 524
+MR MK + + G L +
Sbjct: 417 EMRKMMKKMNQMQASGKLAKM 437
>gi|302345690|ref|YP_003814043.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
gi|302150218|gb|ADK96480.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
Length = 450
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/451 (48%), Positives = 304/451 (67%), Gaps = 11/451 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L + RP++IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGEAVGLNLS-GRPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGV VY+ ++IA L EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVAVYSEPENKNVNEIADHALAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E++ +K ++P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGHDVVIIDTAGRLAVDEEMMNEIESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGG------SLPALSNL 527
Q R MK + G G +P + N+
Sbjct: 417 DQTRKMMKMVTGSKMAGMMSKMKGMPGMPNM 447
>gi|194466489|ref|ZP_03072476.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
gi|194453525|gb|EDX42422.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
Length = 481
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/448 (48%), Positives = 303/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + +Q+ VPV+ GT+V P +I ++G+E AKK
Sbjct: 123 LRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLN 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAA+S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ FD+NDFL Q V +MG + +I M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K + A++ +MTPEERE P+++ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNLNLDPKQFAHIRAIVLSMTPEERESPDIM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-------NLMGVMEGGSLP 522
QMR MK N M M GG +P
Sbjct: 420 FNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|347549198|ref|YP_004855526.1| putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982269|emb|CBW86263.1| Putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 450
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 311/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V +++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 VDVMKSLTPGQQVIKIVQEELTNLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++D VI+DTAGRL ID+ +MDELK VK + +PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 DHLDYVIIDTAGRLHIDETLMDELKQVKEIASPTEILLVVDSMTGQDAVNVAESFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG GK+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGAGKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMQVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 TEMKKMMKQM 430
>gi|298386283|ref|ZP_06995839.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
gi|298260660|gb|EFI03528.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
Length = 440
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 294/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E+ +SRP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVEINL-ESRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN+ +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEITAIKEAINPDEILFVVDSMTGQDAVNTAKEFNVRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|227544363|ref|ZP_03974412.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|338202518|ref|YP_004648663.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
gi|227185626|gb|EEI65697.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|336447758|gb|AEI56373.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
Length = 481
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/448 (48%), Positives = 303/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + +Q+ VPV+ GT+V P +I ++G+E AKK
Sbjct: 123 LRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ FD+NDFL Q V +MG + +I M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K + A++ +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNLNLDPKQFAHIRAIVLSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-------NLMGVMEGGSLP 522
QMR MK N M M GG +P
Sbjct: 420 FNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|357038757|ref|ZP_09100554.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355359549|gb|EHG07311.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 454
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/431 (47%), Positives = 305/431 (70%), Gaps = 3/431 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KL+G+ LT+E++ + ++++RRAL+ ADV+ VV+ F+ + E+AV
Sbjct: 2 VFSGLAEKLQETFKKLRGKGRLTEEDVDQALKEVRRALIGADVNFLVVKDFIARIRERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ +++ + P QQ++KIV DEL LMGG S++ A S PTV+++ GL G GKTT +AKL
Sbjct: 62 GIDVLQSLTPAQQVIKIVHDELTSLMGGTRSKIELAPSPPTVVMMVGLHGAGKTTTTAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN++++QG+ +LVA D+YRPAAI QL +LG Q+ VPV+ G V P IA+ +E+A++
Sbjct: 122 ANHMRRQGRRPLLVACDIYRPAAIKQLQVLGGQLDVPVFNMGDSVAPPDIARAAVEKARR 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+VI+DTAGRL ID+ +M EL ++ + P E+LLVVD+MTGQ+A + TFN +
Sbjct: 182 EGNDLVIIDTAGRLHIDEELMTELHNIVETVGPNEILLVVDSMTGQDAVNVAKTFNERLS 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALSVK V+G PIK VG GE+++ LE F+PDRMA RILGMGD+L
Sbjct: 242 LTGVVLTKLDGDTRGGAALSVKAVTGCPIKFVGMGEKLDALEDFHPDRMADRILGMGDML 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ QE E++ K+I S F +DF++Q V +MG + +++GMIPG+G +
Sbjct: 302 TLIEKAQANFDQEQVEKLNKRIRSMEFTLDDFVQQLNQVKKMGPIDQILGMIPGLGGVKK 361
Query: 444 AQVREA-EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ E +K L +EA+I +MTP ER+ P+ + S RR+R+A+ SG + Q+V++L+ Q
Sbjct: 362 LKDLEVDDKDLVFVEAIINSMTPWERQHPQEINGS--RRRRIARGSGTSVQEVNRLLKQF 419
Query: 503 FQMRVRMKNLM 513
Q R M+ LM
Sbjct: 420 EQTRKMMRQLM 430
>gi|288802708|ref|ZP_06408146.1| signal recognition particle protein [Prevotella melaninogenica D18]
gi|288334858|gb|EFC73295.1| signal recognition particle protein [Prevotella melaninogenica D18]
Length = 450
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/451 (48%), Positives = 304/451 (67%), Gaps = 11/451 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L + RP++IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGEAVGLNLS-GRPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAIDQL ++GEQVGV VY+ ++IA L EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAIDQLKVVGEQVGVAVYSEPENKNVNEIADHALAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VI+DTAGRL +D+ MM+E++ +K ++P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGHDIVIIDTAGRLAVDEEMMNEIESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGG------SLPALSNL 527
Q R MK + G G +P + N+
Sbjct: 417 DQTRKMMKMVTGSKMAGMMSKMKGMPGMPNM 447
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/433 (49%), Positives = 308/433 (71%), Gaps = 8/433 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L +++A K+ + + +E + + +R+I+ ALLEADV+ VV +F+ + E+A+
Sbjct: 1 MFDALAERVQSAIEKIGRKGRIDQETLNKGLREIKLALLEADVNYKVVSKFINDIKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++GV P QQLVKIV DELV+ +GGE ++L KS+P VILL GLQG GKTT +AKL
Sbjct: 61 GAEVVKGVNPAQQLVKIVYDELVEALGGEGAKLEL-KSKPAVILLIGLQGSGKTTTAAKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYLKKQGK +L + DVYRPAA+ QL LG+++GVPV+ E +IAK L++AK+
Sbjct: 120 ANYLKKQGKKVLLTSADVYRPAAMLQLKKLGDKIGVPVFLEEDEKDAVKIAKDALKKAKE 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+N DV+I+DTAGRL ID+ +++E K +K NP EVL V+DAMTGQE+ + FN +G
Sbjct: 180 ENYDVLIIDTAGRLHIDEELLEEAKRIKEETNPDEVLFVIDAMTGQESVNIAKAFNEAVG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTK+D D+RGG ALSVK V+GKPIK G GE++ED +PFYPDR+A RILGMGD++
Sbjct: 240 MTGIVLTKMDSDARGGVALSVKGVTGKPIKFAGVGEKIEDFQPFYPDRVASRILGMGDIV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KI 441
S VEKAQEV+ +++A MQ+K++S F DF KQ + + R+G + +VI MIPG+G KI
Sbjct: 300 SLVEKAQEVIDEKEALSMQEKLLSGEFTLEDFRKQLQMIQRLGPLQQVIRMIPGLGSQKI 359
Query: 442 TPAQVREA--EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
Q+ E +K LK +EA+I +MTPEER ++ S R++R+A+ SG + ++V L+
Sbjct: 360 LK-QLEEVIDDKKLKRIEAIINSMTPEERRNHAIINAS--RKRRIARGSGTSVKEVDALL 416
Query: 500 AQLFQMRVRMKNL 512
Q QM++ MK +
Sbjct: 417 KQFVQMKMAMKQM 429
>gi|317055139|ref|YP_004103606.1| signal recognition particle protein [Ruminococcus albus 7]
gi|315447408|gb|ADU20972.1| signal recognition particle protein [Ruminococcus albus 7]
Length = 458
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/428 (48%), Positives = 298/428 (69%), Gaps = 3/428 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L + KLKG LT+ ++ E M++++ ALLEADVS VV+ FV V+E++VG
Sbjct: 3 FEGLSEKLGGVFKKLKGRGKLTEADVKEAMKEVKMALLEADVSYKVVKDFVANVTERSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV +ELVKLMG S++ F P VI++ GLQG GKTT +AKLA
Sbjct: 63 EDVLKSLTPAQQVIKIVNEELVKLMGEANSKINFPSKPPCVIMMCGLQGSGKTTHAAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
K+QG +L+A DVYRPAAIDQL I+ E+ VPV+ G ++ P +I K+GL++AK
Sbjct: 123 KMFKRQGSRPLLIAADVYRPAAIDQLKIVAEKAQVPVFEMG-QIDPRKIVKEGLKQAKDY 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D+VI+DTAGRL ID+ +MDELKD+K++ P+E++LVVDAM GQ+A + ++F+ +GI
Sbjct: 182 GNDMVIIDTAGRLHIDEELMDELKDIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALGI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
ILTKLD D+RGGAALSV V+GKPIK VG GE++++ EPF+P+RMA RILGMGD+L+
Sbjct: 242 DSVILTKLDSDTRGGAALSVLAVTGKPIKFVGMGEKLDEFEPFHPERMASRILGMGDMLT 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKA + + +E+AE++ KK+ FD ND L+Q + + +MGS+ +I M+PG K++
Sbjct: 302 LIEKASQTVDEEEAEKLAKKMQEEGFDLNDLLEQMKQIHKMGSIKNIISMLPGANKVSDE 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
+ E +LK EAMI +MT ER+KP ++ P R++R+A SG V+QL+ Q
Sbjct: 362 DLEMGEAALKKTEAMIHSMTKAERKKPAII--DPKRKRRIAAGSGTQVSDVNQLLKQYED 419
Query: 505 MRVRMKNL 512
M+ MK
Sbjct: 420 MKKMMKQF 427
>gi|289435144|ref|YP_003465016.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289171388|emb|CBH27932.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 450
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 TDVMKSLTPGQQVIKIVQEELTNLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++D VI+DTAGRL ID+ +MDELK VK + NPTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 DHLDYVIIDTAGRLHIDETLMDELKQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK V GE+ME +E F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG GK+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMQVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 NEMKKMMKQM 430
>gi|260583609|ref|ZP_05851357.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
gi|260158235|gb|EEW93303.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
Length = 478
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 307/442 (69%), Gaps = 8/442 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A + + +T+ ++ + MR++R ALLEADV+ VV+ FV+ V+E+A+G
Sbjct: 3 FEGLSDRLQNAMGSVTKKGKITEADLKQMMREVRLALLEADVNFKVVKDFVRKVNERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +LMGGE S F+ PTV+++ GLQG GKTT + KLA
Sbjct: 63 SNVLEALSPAQQVVKIVNEELTELMGGEQSPFQFSPKPPTVVMMIGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
++L K + K +LVA DVYRPAAIDQL LG+Q+ PV++ GT+V P +IA+Q +E A
Sbjct: 123 SFLAKHENKRPLLVAADVYRPAAIDQLQTLGKQLNYPVFSLGTDVNPVEIARQAIERATI 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+VI+DTAGRL ID+A+M+EL+++K V NP E+LLVVD MTGQ+A + TFN +
Sbjct: 183 EGRDLVIIDTAGRLHIDEALMEELQNIKAVANPNEILLVVDVMTGQDAVNVAETFNERLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK GRGE++ED E FYP+RMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRSVTGKPIKFSGRGEKLEDFEIFYPERMASRILGMGDIM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ + A+EM KI + FDFNDF+ Q V +MG + ++ MIPG+ KI
Sbjct: 303 TLIEKAQQDFDEAKAQEMADKIKANTFDFNDFIDQLDQVNKMGPLEDILKMIPGLNKIPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ K M+A++ +MTP ERE P++L+++ RRKR+A S + +V++L+ Q
Sbjct: 363 LNDLKVDPKDTARMKAIVLSMTPAERENPDILSQA--RRKRIAAGSARPLAEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
+ K +M M G++ A+
Sbjct: 421 NE----SKKMMNQMSNGNMQAM 438
>gi|375088729|ref|ZP_09735067.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
gi|374561694|gb|EHR33033.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
Length = 512
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 312/443 (70%), Gaps = 14/443 (3%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L + L+ A++ LK + +T+++I E MR++R ALLEADV+ VVR F+++V E+A+G
Sbjct: 3 FEGLQNRLQDAFSVLKKKGKITEQDIKEAMREVRLALLEADVNYKVVREFIKSVREKAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP---TVILLAGLQGVGKTTVSA 201
++ V Q+VKIV DEL +LMGGE +++ A S P TV ++ GLQG GKTT +
Sbjct: 63 SEVLENVEGGHQVVKIVSDELTELMGGERQDIITA-SEPGEITVYMMVGLQGAGKTTTAG 121
Query: 202 KLANYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
KL+NYL+K + MLVA D+YRPAAIDQL +G+++ +PV++ G +V P +IA++G++E
Sbjct: 122 KLSNYLRKHENMKPMLVAADIYRPAAIDQLQQVGKELNIPVFSMGDDVSPVEIARRGVQE 181
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
AK +N +VVI+DTAGRL ID A+M EL D+K +NP E+ LVVDAMTGQ+A + TFN
Sbjct: 182 AKDENRNVVIIDTAGRLHIDDALMTELSDIKSEVNPHEIFLVVDAMTGQDAVNVSDTFNK 241
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
++ I+ ILTKLDGD+RGGAALS+ +V+ KPIK G GE+++ LEPFYP+RMA RILGMG
Sbjct: 242 QLDISSVILTKLDGDTRGGAALSISKVTNKPIKFTGTGEKLDALEPFYPERMANRILGMG 301
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
D+L+ VE+AQ+ M + AEE+ +K+ +DFNDF++Q + MG + +I MIPGM
Sbjct: 302 DILTLVERAQQEMDDKRAEELAQKMAEQTYDFNDFIEQMDQMRNMGPLEDLIKMIPGMSN 361
Query: 441 ITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQL 498
+ P Q EK L M+A++ +MTPEER+ P++L+++ RRKR+A +G+T V++L
Sbjct: 362 L-PGMDQFEVDEKDLDRMKAIVLSMTPEERKNPDILSQN--RRKRIADGAGRTLLDVNKL 418
Query: 499 VAQLFQMRVRMKNLMGVMEGGSL 521
+ Q Q K LMG M G +
Sbjct: 419 ITQFKQ----SKELMGDMSSGKM 437
>gi|332880672|ref|ZP_08448345.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357045958|ref|ZP_09107588.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
gi|332681306|gb|EGJ54230.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355530964|gb|EHH00367.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
Length = 450
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 294/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGGE +EL + P+VIL+AGL G GKTT+S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELATLMGGETAELNL-QGHPSVILMAGLNGAGKTTLSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K+ +L A D+YRPAAI+QL +LGEQ+G+PVY+ QIA+ ++EAK
Sbjct: 120 ALMLKTKKRKNPLLAACDIYRPAAIEQLKVLGEQIGIPVYSEPDNKDAVQIAQNAVKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM E+ +K +NP E L VVDAMTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEQMMQEIAAIKHGINPDETLFVVDAMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKMEAIDQFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE +E+A +QKKI FDFNDF+ Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVEKAQEQYDEEEARRLQKKIAKNQFDFNDFMSQIQQIKKMGNLKDLASMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDVEIDDNAFKGIEAIIQSMTPRERTNPEILNTS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|404418469|ref|ZP_11000236.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
gi|403489062|gb|EJY94640.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
Length = 454
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQDTMQKIRGKGKVTEADIKMMMREVRLALLEADVNFKVVKDFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE S + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQDELTQLMGGENSTITMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAIDQL +G+Q+ VPVY+ G +VKP +I + L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAIDQLQTVGKQLDVPVYSEGDQVKPQEIVENALQHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+MDEL+DVK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMDELQDVKTIAKPNEIMLVVDAMTGQDAVNVAQSFDEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + Q+ A+++++K+ S++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQDKAKDLEQKMRSSSFTLDDFLEQLDQVKSLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +EK + ++A+I++MTP ER P L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDNLNMSEKQIDHIKAIIQSMTPNERNDPNTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK
Sbjct: 421 NEMKKMMKQF 430
>gi|320354484|ref|YP_004195823.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
gi|320122986|gb|ADW18532.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
Length = 449
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/442 (49%), Positives = 307/442 (69%), Gaps = 10/442 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE+ + KL+G LT+ENI E M ++R ALLEADV+ VV+ F+ +V+E+A+
Sbjct: 1 MFENLTDRLESTFKKLRGHGRLTEENIQEAMGEVRTALLEADVNFGVVKEFIASVTEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ+VK+V DELV+L+G + L +P VI+LAGLQG GKTT +AKL
Sbjct: 61 GREVLTSLSPGQQVVKVVHDELVELLGSQAEPLKLDGRQPVVIMLAGLQGSGKTTTAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK++G++ LV DVYRPAAI+QL +LGEQVGVPVY + TE KP IA+Q + EA+
Sbjct: 121 AKQLKEKGRAPFLVPADVYRPAAIEQLHVLGEQVGVPVYASTTEQKPVDIARQAVAEART 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRL +D+A+M EL+++ R + EVL V DAMTGQ+A + FN ++
Sbjct: 181 GHYDTVIIDTAGRLHVDEALMAELQEISRTVPLAEVLFVADAMTGQDAVTVADKFNTDLE 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK++GD+RGGAALSVK+V+GKPIK VG GE +E LE F+PDR A RILGMGDVL
Sbjct: 241 ITGVVLTKMEGDARGGAALSVKKVTGKPIKFVGVGESVEALEVFHPDRAASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+ V+ Q++AE + KKI F DFL Q + + +MG++ +++GMIPG+ K+
Sbjct: 301 SLIEKAEAVVDQKNAERLAKKIQKNAFTLEDFLDQIQQIKKMGTLEQIMGMIPGINKLK- 359
Query: 444 AQVREA----EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
Q+++A +K L EA+I +MT +ER ++ S RR R+A SG + +V++++
Sbjct: 360 -QLKDAPKPDQKELVKTEAIIRSMTLKERRNHRIIDAS--RRVRIANGSGTSVAEVNRVL 416
Query: 500 AQLFQMRVRMKNL--MGVMEGG 519
M MKNL G++ GG
Sbjct: 417 KSYTMMLKMMKNLKGKGIVSGG 438
>gi|392426862|ref|YP_006467856.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
gi|391356825|gb|AFM42524.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
Length = 452
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/431 (51%), Positives = 303/431 (70%), Gaps = 4/431 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + KLKG+ L + ++ E MR++R ALLEADV+ VV+ FV V E+ +
Sbjct: 1 MFQGLSDKLQETFKKLKGKGILKEADVNEAMREVRVALLEADVNFKVVKDFVAKVKERCI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +E++ LMGG +++ A PTVILL GLQG GKTT +AKL
Sbjct: 61 GQDVLESLSPAQQVIKIVHEEMIDLMGGATGKILVAPKPPTVILLLGLQGAGKTTHAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LGEQ+ VPV++ G E P+ IA L+ A +
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLEVLGEQIKVPVFSMGQE-PPADIALASLKHAYQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +MDEL+ +K + P E+LLVVDAMTGQ+A + +F+ EIG
Sbjct: 180 NGQDVVIIDTAGRLHINEELMDELRAIKTTVKPHEILLVVDAMTGQDAVNVAESFHKEIG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V+G IK G GE+M+ LEPF+PDRMA RILGMGDVL
Sbjct: 240 LDGVILTKLDGDTRGGAALSIKAVTGCTIKFAGTGEKMDALEPFHPDRMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE Q+ A+EM++K+ F +DFL Q + + +MG +S ++ MIPG+GK
Sbjct: 300 TLIEKAQESFDQKKAKEMEQKLRKQEFTLDDFLDQMQQMKKMGPLSSLLEMIPGVGK-QL 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ EK +EA+I +MT EER KP L+ +S R+KR+A+ SG + Q+V +L+ Q
Sbjct: 359 KDVKIDEKDTAHIEAIIRSMTLEERRKPALIKDS--RKKRIAKGSGTSVQEVGRLLKQFE 416
Query: 504 QMRVRMKNLMG 514
QM+ MK L G
Sbjct: 417 QMQKMMKQLTG 427
>gi|313673954|ref|YP_004052065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
gi|312940710|gb|ADR19902.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
Length = 448
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 291/429 (67%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ + KL+GE LT+ENI E ++ +R ALLEADV+ VV++F+ V +A+
Sbjct: 1 MFAALNEKLQGVFRKLRGEVKLTEENIKEAIKQVRIALLEADVNYKVVKKFIDNVQSKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + PDQ +K+V DELV ++G S++ + PTVI+L GLQG GKTT + KL
Sbjct: 61 GEIVLKSLTPDQVFIKLVHDELVSILGSHTSKINLKPNPPTVIMLVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A Y +K G+S +LVA D+YRPAAIDQL++LG Q+ V+ ++IA +G+++AKK
Sbjct: 121 AKYFQKDGRSTLLVADDIYRPAAIDQLIVLGNQLKTDVFYDKESKNATEIAVRGVDQAKK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +M ELK +K +NP E+L V DAM GQ+A + FN IG
Sbjct: 181 SAKDIVIIDTAGRLHIDEDLMKELKSIKNAVNPDEILFVADAMIGQDAVNVAKQFNEAIG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG I TKLDGD+RGGAALS+ EV+G PIK VG GE+++ E F+PDRMA RILGMGDV+
Sbjct: 241 ITGVIFTKLDGDARGGAALSIMEVTGVPIKFVGIGEKLDAFELFHPDRMASRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VE AQE + E+A+EM K+ DFND L+Q R + +MGS+ ++ +IPG+ +
Sbjct: 301 TLVEMAQEAIDAEEAKEMATKVGKTGLDFNDLLQQFRMIKKMGSLESIMKLIPGLSAMPD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V +K K +EA+I +MTPEER+K ++ S R+KR+A+ SG T V++L+ QL
Sbjct: 361 LNVD--DKQFKRIEAIIYSMTPEERKKAHIINGS--RKKRIAKGSGTTVNDVNKLIMQLE 416
Query: 504 QMRVRMKNL 512
QM +K
Sbjct: 417 QMNKMLKKF 425
>gi|299536774|ref|ZP_07050082.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|424737018|ref|ZP_18165474.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
gi|298727786|gb|EFI68353.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|422948850|gb|EKU43226.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
Length = 452
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/450 (49%), Positives = 318/450 (70%), Gaps = 9/450 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K+KG+ ++++++ E MR++R AL+EADV+L VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQGTIQKIKGKGKVSEQDVKEMMREVRFALIEADVNLKVVKEFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V +++ + P QQ++KIV+DEL +LMGGE S + F PTVI++ GLQG GKTT + KLA
Sbjct: 63 VDVMQSLTPGQQVIKIVQDELTELMGGEQSPIKFNTKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA DVYRPAA+ QL LG+Q+ +PV+ GTEV P +IA+Q +E AK+
Sbjct: 123 NVLRKKYNRKPLLVAADVYRPAAVQQLQTLGKQLSLPVFALGTEVSPVEIARQAIELAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ DVVI+DTAGRL ID+ +M ELKD++ + P EV LVVDAMTGQ+A + +FN IG
Sbjct: 183 EHHDVVIIDTAGRLHIDEDLMQELKDIRSLKEPDEVFLVVDAMTGQDAVNVAESFNEAIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + + A+E+++K S F F+DF++Q + V +MG + ++ M+PG KI
Sbjct: 303 SLIEKAQANVDEAKAKELEEKFKSQTFTFDDFVEQLQQVKKMGPLDEILKMLPGANKIKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V+ +K + +EA+I +MTP E+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 363 LDNVKVDDKQMGRVEAIIYSMTPAEKTNPEIINGS--RKKRIAKGSGTSIQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGG-----SLPALSNL 527
+M+ MK + G+ G LP +L
Sbjct: 421 DEMKKMMKQMTGMASGKGKKKMKLPGFDSL 450
>gi|408492133|ref|YP_006868502.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
gi|408469408|gb|AFU69752.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
Length = 442
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/420 (49%), Positives = 294/420 (70%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ E ++++RRAL++ADV+ + + F V E+A+
Sbjct: 1 MFDSLSDKLDKAFHVLKGHGQITEVNVAETLKEVRRALVDADVNFKIAKDFTNLVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ ++P+Q +VKIV+DEL KLMGG+ E+ + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLKTLKPNQLMVKIVKDELTKLMGGDAEEVDLS-GNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAIDQL ++G+Q+GV V++ E P IA+ + AK
Sbjct: 120 ANYLKSKKSKQPLLVACDVYRPAAIDQLHVVGDQIGVEVFSNKEEKNPVLIAEAAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL +D+ MM+E+ D+ + + P E L VVDAMTGQ+A TFN +
Sbjct: 180 QNGHNVVILDTAGRLAVDQVMMNEISDIYKAVKPQETLFVVDAMTGQDAVNTAKTFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 DFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +++A ++QKKI F F+DFLKQ + V +MGSM ++GMIPG GK+
Sbjct: 300 VSLVERAQEQYDEDEARKIQKKIAKDKFGFDDFLKQIQQVKKMGSMKDLMGMIPGAGKMM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EAMI +MTP ERE P + S R+KR+ + SG + Q+V+QL+ Q
Sbjct: 360 K-NMDIDDDAFKHIEAMIHSMTPHERENPTSINAS--RKKRIGKGSGTSVQEVNQLLKQF 416
>gi|224539094|ref|ZP_03679633.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519284|gb|EEF88389.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
Length = 439
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ + +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEIDL-EGKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+GVP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNKKPLLVACDVYRPAAIEQLRVLAEQIGVPIYSEPDSKNPVKIAENAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEEMMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P LL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|374708674|ref|ZP_09713108.1| signal recognition particle protein [Sporolactobacillus inulinus
CASD]
Length = 447
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/436 (47%), Positives = 306/436 (70%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G +++ ++ + MR+IR ALLEADV+ VV+ F++ V E+AVG
Sbjct: 3 FESLSDRLQATMKKIRGRGKVSENDVKQMMREIRLALLEADVNFKVVKTFIKKVQERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE ++L F+ PTV+L GLQG GKTT +AKLA
Sbjct: 63 QEIMKSLTPGQQIIKVVQEELTELMGGEQTKLNFSLKPPTVLLFVGLQGAGKTTSAAKLA 122
Query: 205 NYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+++K K +++A D+YRPAAI QL LG Q+ +PV++ G +V P I +QG+++A+
Sbjct: 123 NHIRKNNNKKPLMIAADIYRPAAIKQLQTLGSQLNIPVFSLGDQVNPVDIVRQGMDQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+VI+DTAGRL ID+ +M+EL+ +K V +P EV LVVDAMTGQ+A + FN +
Sbjct: 183 DHNDLVIIDTAGRLHIDEGLMNELEQIKEVSHPDEVFLVVDAMTGQDAVNVARAFNDRLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG I+TKLDGD+RGGAALS++ V+GKPIK VG GE+M+ LEPF+PDRMA RILGMGDVL
Sbjct: 243 ITGVIMTKLDGDTRGGAALSIRSVTGKPIKFVGMGEKMDALEPFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + +E A +MQ+K++S +F +DFL+Q V MG + ++ M+PG K
Sbjct: 303 SLIEKAQATIDEEKARDMQQKLLSVSFTLDDFLEQIGQVRTMGPLEDLLAMMPGANKFKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK + EA+I +MT E+ +PE++ S R+KR+A SG + V++L+ Q
Sbjct: 363 MKNMQIDEKKIDQTEAIIRSMTSHEKTEPEIINAS--RKKRIALGSGTSVADVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
M+ MK MG +G
Sbjct: 421 KDMKKMMKQFMGKAKG 436
>gi|218130040|ref|ZP_03458844.1| hypothetical protein BACEGG_01625 [Bacteroides eggerthii DSM 20697]
gi|317476534|ref|ZP_07935781.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
gi|217987760|gb|EEC54087.1| signal recognition particle protein [Bacteroides eggerthii DSM
20697]
gi|316907277|gb|EFV28984.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
Length = 440
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 298/442 (67%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ S+P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSEPDSKNPVAIAQNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEEMMNEIAAIKAAINPNEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLNQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|422422505|ref|ZP_16499458.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
gi|313637361|gb|EFS02841.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
Length = 450
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTNLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++D VI+DTAGRL ID+ +MDELK VK + NPTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 DHLDYVIIDTAGRLHIDETLMDELKQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK V GE+ME +E F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG GK+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMQVDDKQLGHIEAIIKSMTKNEKDYPDIINAS--RRKRIARGSGRPIQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 TEMKKMMKQM 430
>gi|358051766|ref|ZP_09145874.1| signal recognition particle protein [Staphylococcus simiae CCM
7213]
gi|357258737|gb|EHJ08686.1| signal recognition particle protein [Staphylococcus simiae CCM
7213]
Length = 455
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKTMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV+DEL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVVKIVQDELTQLMGGENTSITMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAIDQL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAIDQLQTVGKQIDIPVYSEGDQVKPQQIVTNALQHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEIAQPNEIMLVVDAMTGQDAVNVAESFDNQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 ITGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K + ++A+I++MT EER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMNDKQIDHIKAIIQSMTKEERHNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|365853514|ref|ZP_09393781.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
gi|363712139|gb|EHL95838.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
Length = 478
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 311/446 (69%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+G+ +++ ++ MR+IR ALLEADV+ VVR+FV+ V ++A G
Sbjct: 3 FEGLTERLQNAMRKLRGKGKISEADLRATMREIRLALLEADVNFQVVRQFVKTVEDRAKG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV +EL K MG E L A PT+I+++GLQG GKTT KLA
Sbjct: 63 SKVLEGLNPSQQIVKIVDEELTKTMGEEAVGLNKAPKIPTIIMMSGLQGAGKTTTVGKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +L+A DVYRPAAI+QL +G+Q+ VPV+ GT+V P +IAKQGL++A++
Sbjct: 123 LKLKNEQNARPLLIADDVYRPAAIEQLQTVGQQIDVPVFEMGTDVDPVEIAKQGLKKAQE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDELK++K ++P E+LLV+DAMTGQ A A F+ +
Sbjct: 183 DHNDYVIIDTAGRLQIDEKLMDELKNIKEAVHPNEILLVIDAMTGQNAVATAEGFDKTLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGQGEKMTDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ ++ A+E+ +KI +FDFNDFL Q + +MG + ++ MIPGM P
Sbjct: 303 SLIEKTQKEYDEKQAQELSEKIKENSFDFNDFLDQLDQIQKMGPLDEIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K + ++A+I +MT +ER P+++ +P RR+R+A+ SG+ Q+V++++ Q
Sbjct: 362 AMKNVNMDPKDMDHLKAIIYSMTEQERTDPDIM--NPSRRRRIARGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M + G++ + N+
Sbjct: 420 FNQ----MKTMMNKVSKGNMSGMENM 441
>gi|169827098|ref|YP_001697256.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
gi|168991586|gb|ACA39126.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
Length = 452
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/450 (48%), Positives = 320/450 (71%), Gaps = 9/450 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K+KG+ ++++++ E MR++R AL+EADV+L VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQGTIQKIKGKGKVSEQDVKEMMREVRFALIEADVNLKVVKEFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V +++ + P QQ++KIV+DEL +LMGGE S + F PTVI++ GLQG GKTT + KLA
Sbjct: 63 VDVMQSLTPGQQVIKIVQDELTELMGGEQSPIKFNTKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA DVYRPAA+ QL LG+Q+ +PV++ GT++ P +IA+Q +E+AK+
Sbjct: 123 NVLRKKYNRKPLLVAADVYRPAAVQQLETLGKQLSLPVFSLGTDISPVKIARQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ DVVI+DTAGRL ID+ +M ELKD++ + P EV LVVDAMTGQ+A + +FN IG
Sbjct: 183 DHHDVVIIDTAGRLHIDEDLMQELKDIRALKEPDEVFLVVDAMTGQDAVNVAESFNEAIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + + A+E+++K + +F F+DF++Q + V +MG + ++ M+PG KI
Sbjct: 303 SLIEKAQANVDEAKAKELEEKFKTQSFTFDDFVEQLQQVKKMGPLDEILKMLPGANKIKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V+ +K + +EA+I +MTP E+ PEL+ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 363 LDNVKVDDKQMGRVEAIIYSMTPAEKTNPELINGS--RKKRIAKGSGTSIQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGG-----SLPALSNL 527
+M+ MK + G+ G LP +L
Sbjct: 421 DEMKKMMKQMTGMASGKGKKKMKLPGFDSL 450
>gi|331701481|ref|YP_004398440.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|406027042|ref|YP_006725874.1| signal recognition particle protein [Lactobacillus buchneri CD034]
gi|329128824|gb|AEB73377.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125531|gb|AFS00292.1| signal recognition particle protein [Lactobacillus buchneri CD034]
Length = 479
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/447 (47%), Positives = 308/447 (68%), Gaps = 12/447 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A L+G+ +++ ++ MR+IR ALLEADV+ VVR FV+ V E+A G
Sbjct: 3 FEGLTERLQNAMKTLRGKGKVSQSDLRATMREIRLALLEADVNFQVVRDFVKTVEERANG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV +EL K MG E L A+ PT+I+++GLQG GKTT + KLA
Sbjct: 63 AKVLEGLNPSQQIVKIVDEELTKTMGEEAVPLNKAEKIPTIIMMSGLQGAGKTTTAGKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +L+A D+YRPAAIDQL +G+Q+ VPV++ GT+V P +IAK+G+E+AK+
Sbjct: 123 LKLKNEQNARPLLIADDIYRPAAIDQLQTVGQQIDVPVFSLGTDVDPVEIAKRGVEQAKQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL +K + P E+LLV+DAMTGQ A A FN +
Sbjct: 183 DHNDYVIIDTAGRLQIDEKLMDELSHIKDAVEPNEILLVIDAMTGQNAVATAEGFNKTLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ KPIK VG+GE+M DL+ FYPDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTQKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ ++ A+E+ +KI FDFNDF+ Q + +MG + ++ MIPGM
Sbjct: 303 SLIEKTQKEYDEKQAQELSEKIQENTFDFNDFVDQLNQIQKMGPLDEIMKMIPGMA--NN 360
Query: 444 AQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q++ A K + ++A++ +MT +ER P++L +P RR+R+A+ SG+ Q+V++++
Sbjct: 361 PQLKNANMDPKDMDHLKAIVYSMTDQERTDPDVL--NPSRRRRIARGSGRPIQEVNRMIK 418
Query: 501 QLFQMRVRMKNLMGVMEGGSLPALSNL 527
Q Q MK +M + G++ + N+
Sbjct: 419 QFGQ----MKTMMNKVSKGNMSGMENM 441
>gi|377556838|ref|ZP_09786517.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
gi|376167268|gb|EHS86121.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
Length = 483
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/459 (47%), Positives = 309/459 (67%), Gaps = 10/459 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ KL+ + +T ++ E MR+IR ALLEADV+ VV+ FV+ V EQAVG
Sbjct: 3 FEGLTERLQKTMEKLRRKPKVTDADLRETMREIRLALLEADVNFTVVKNFVKTVQEQAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV +EL K+MG L + PTVI++ GLQG GKTT + KLA
Sbjct: 63 TEVLKGLNPAQQIVKIVNEELTKMMGETAVPLNKSDHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + K+ M +A D+YRPAAI QL + + + VPV+ GT+V P +I +QG+E AK+
Sbjct: 123 LRLKNEEKARPMFIAADIYRPAAITQLKQVADSIDVPVFDLGTDVDPVEIVRQGMEVAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+A+MDEL ++K + +P E+LLVVDAMTGQ A F+ ++
Sbjct: 183 HHNDYVIIDTAGRLQIDEALMDELANIKALAHPDEILLVVDAMTGQNAVNTAEGFDEKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+ME+L+ FYPDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMENLDVFYPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A E +K+ NFD+NDFL Q V++MG + +I M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAAETMRKMQENNFDYNDFLDQMDQVSKMGPLEDLIKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A+I++MTPEERE P+L+ +P RR+R+A SG+ +V++++ Q
Sbjct: 362 ALKNINIDPKQFLHIKAIIQSMTPEERENPDLM--NPSRRRRLAAGSGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 540
QMR MK + G+L + N+ L + P G
Sbjct: 420 FDQMRKMMKQV----TNGNLNGMENMMGGLGNMPGMPGG 454
>gi|260893271|ref|YP_003239368.1| signal recognition particle protein [Ammonifex degensii KC4]
gi|260865412|gb|ACX52518.1| signal recognition particle protein [Ammonifex degensii KC4]
Length = 445
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/433 (49%), Positives = 301/433 (69%), Gaps = 6/433 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F LT L+ + KL+ + LT+E++ +R+IR ALLEADV+ VV+ F+ + E+AV
Sbjct: 3 LFFGLTEKLQEVFKKLRNKGKLTEEDVNAALREIRLALLEADVNYKVVKDFIARIKERAV 62
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+ + P Q+VKIVRDELV LMGG+ + L A PTV++L GLQG GKTT +AKL
Sbjct: 63 GQEVIQSLSPAHQVVKIVRDELVSLMGGQSARLNLAPKPPTVVMLVGLQGSGKTTTAAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQG+ +LVA DVYRPAA+ QL +LGEQ+ VPV++ P +IA + EA
Sbjct: 123 ALSLKKQGRRPLLVAADVYRPAAVKQLQVLGEQIQVPVWSRPG--NPVEIAASAMHEANH 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K DVVI+DTAGRL I++ +M EL+++K + P EVLLVVDAMTGQ+A + TF+ +G
Sbjct: 181 KGYDVVIIDTAGRLHINEELMQELEEIKARVKPHEVLLVVDAMTGQDAVTVAETFHQRLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+G PIK VG GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 241 LDGVVLTKLDGDTRGGAALSIRAVTGCPIKFVGVGEKLDMLEPFHPDRMADRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KI 441
+ +EKAQ + E A MQK+++S +F+ DFL+ R +MG + ++ ++PG G K
Sbjct: 301 TLIEKAQSTIDAEQAAAMQKRLLSDDFNLEDFLEHLRQFRKMGPLEHILSLLPGFGGVKK 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+++ EK L +EA+I +MTPEER PE++ S R++R+A+ SG T Q V++L+ Q
Sbjct: 361 LKEELQFDEKELIRVEAIINSMTPEERRHPEIIDGS--RKRRIARGSGTTVQDVNRLLKQ 418
Query: 502 LFQMRVRMKNLMG 514
Q + ++ MG
Sbjct: 419 FEQTKKLIRQFMG 431
>gi|340352886|ref|ZP_08675720.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
gi|339612202|gb|EGQ17015.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
Length = 450
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/445 (48%), Positives = 302/445 (67%), Gaps = 5/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DELVKLMGGE L +++P +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELVKLMGGESVGLKL-ENKPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI QL ++GE V VPVY+ + IA+ ++EAK
Sbjct: 120 ANLLKTKEHKKPLLVACDVYRPAAIQQLKVVGESVDVPVYSEPDSKNVNAIAENAIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGRL +D MMDE++ +K+ +NP EVL VVD+MTGQ+A FN +
Sbjct: 180 SNGNDVVIIDTAGRLAVDAEMMDEIESLKKHVNPDEVLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+M+ L+ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMDALDVFHPARMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEILNNS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q R MK + G G + + N+
Sbjct: 417 EQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|146297160|ref|YP_001180931.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410736|gb|ABP67740.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 443
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 296/429 (68%), Gaps = 2/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + KL+G+ LT+++I + M++++ ALLEADV+ VV+ F+ V+++AV
Sbjct: 1 MFSSLSEKLQDVFKKLRGKGKLTEKDIKDAMKEVKLALLEADVNYKVVKDFINTVTQKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DE+V L+GG ++L F+ S ++ ++ GLQG GKTT + KL
Sbjct: 61 GEEVLESLTPAQQVIKIVYDEMVNLLGGNDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK +L+A D+YRPAAI QL ++ E+VGV Y + +IA +G+ AK
Sbjct: 121 AALLKKQGKKPLLIACDIYRPAAIKQLEVVAEKVGVSCYADYDKKDAVKIAVEGVNFAKS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+ IVDTAGRL I++ +M+EL +K + PTE+LLV+DAMTGQ+A + FN ++G
Sbjct: 181 NRFDIAIVDTAGRLHINEELMNELVAIKSAIKPTEILLVLDAMTGQDAVNVAEAFNNQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK ++GKPIK G GE+MEDLE FYPDRMA RILGMGD+L
Sbjct: 241 IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGMGEKMEDLEVFYPDRMASRILGMGDIL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + Q+ AEE++KK+ S F DFL Q + + +MG +S++I MIPG+
Sbjct: 301 TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
EK LK +EA+I +MT EER+ P ++ S R++R+A SG T Q V++L+ Q
Sbjct: 361 VDFDAGEKELKKIEAIINSMTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFE 418
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 419 DMKRMMKQF 427
>gi|402836125|ref|ZP_10884675.1| signal recognition particle protein [Mogibacterium sp. CM50]
gi|402272137|gb|EJU21360.1| signal recognition particle protein [Mogibacterium sp. CM50]
Length = 447
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 298/430 (69%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + L+G+ +++++I MR+++ ALLEADV+ VV++FV + ++A+G
Sbjct: 3 FEGLSEKLQETFRNLRGKGVVSEKDIDAAMREVKLALLEADVNFKVVKQFVATIKDKAMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++ELV +MGG S+L ++ S TV ++ GLQG GKTT KLA
Sbjct: 63 ADVLKSLTPGQQVLKIVKEELVDMMGGANSKLTYSPSGFTVYMMVGLQGTGKTTTCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+LK+ GK ML A DVYRPAAIDQL ++G+ V PV+T +P IAK +EEAK+K
Sbjct: 123 AWLKQNGKKPMLCACDVYRPAAIDQLEVVGKAVNTPVFTMRESNEPLAIAKAAVEEAKRK 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+V+IVDTAGRLQID+A+MDEL +K+ + P E+LL VDA+TGQ+A + FN +GI
Sbjct: 183 GCNVLIVDTAGRLQIDEALMDELVQLKKGIRPHEILLAVDALTGQDAVNIAAGFNETLGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G I+TK+DGDSRGGAALS K V+GKPIK +G GE+ LEPF+PDR+A RILGMGDV+S
Sbjct: 243 DGIIMTKMDGDSRGGAALSTKMVTGKPIKFMGTGEKYNALEPFHPDRIASRILGMGDVMS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+E+A+ +E+A M++K FD NDFL Q + RMG ++++I MIPG+
Sbjct: 303 LIEQAENAYSEEEAARMEEKFRKNQFDLNDFLNQMGQINRMGGIAKLIDMIPGISAADKK 362
Query: 445 QV--REAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q+ + +K L M+A+I++MT EERE P +L S RRKR+A SG+T Q ++QL+ Q
Sbjct: 363 QIDFEKGKKDLDRMKAIIQSMTNEERENPNILNAS--RRKRIAAGSGQTVQSINQLIKQF 420
Query: 503 FQMRVRMKNL 512
QM+ +K
Sbjct: 421 DQMKAMIKQF 430
>gi|148544379|ref|YP_001271749.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|184153743|ref|YP_001842084.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227363196|ref|ZP_03847330.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|325682699|ref|ZP_08162215.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
gi|148531413|gb|ABQ83412.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|183225087|dbj|BAG25604.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227071802|gb|EEI10091.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|324977049|gb|EGC14000.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
Length = 481
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/448 (48%), Positives = 303/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + +Q+ VPV+ GT+V P +I ++G+E A+K
Sbjct: 123 LRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAQK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAA+S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ FD+NDFL Q V +MG + +I M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K + A++ +MTPEERE P+++ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNLNLDPKQFAHIRAIVLSMTPEERENPDIM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-------NLMGVMEGGSLP 522
QMR MK N M M GG +P
Sbjct: 420 FNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|147678059|ref|YP_001212274.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
gi|146274156|dbj|BAF59905.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
Length = 450
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/456 (48%), Positives = 302/456 (66%), Gaps = 14/456 (3%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ + KL+G+ LT+ ++ E +R++R ALLEADV+ VV+ F+ + E+AV
Sbjct: 2 VFAGLSERLQETFRKLRGKGRLTEADVNEALREVRMALLEADVNFKVVKDFIARIKEKAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G LI + P Q +VK+V ELV LMGG S++ A PTVI++ GL G GKTT SAKL
Sbjct: 62 GQELIESLNPAQHVVKVVHGELVALMGGSNSKINMAPKPPTVIMMVGLNGAGKTTTSAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYL+KQG+ +LVA DVYRPAA+ QL +LGEQ+G+PV+ GT +P I E A
Sbjct: 122 ANYLRKQGRRPLLVAADVYRPAAVKQLQVLGEQLGIPVFADGTGKEPVSIGLAAAESAVT 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGR ++++ +M EL+ +K + P EVLLVVDAMTGQ A + TFN +G
Sbjct: 182 GGRDVVIIDTAGRQEVNEELMAELEAMKEAIRPHEVLLVVDAMTGQAAVGVAETFNSRLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSV+ V+GKPIK G GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 242 LDGVILTKLDGDTRGGAALSVRAVTGKPIKFAGLGEKLDALEPFHPDRMAERILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE E MQKKI S F DFL+Q V ++G + +++ MIPG+G I
Sbjct: 302 TLIEKAQENFNAEQMARMQKKIRSMEFTLEDFLEQLTQVKKLGPLEQILSMIPGLGGIKK 361
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I +MTPEER PE + R++R+A+ SG + Q+V++L+ Q
Sbjct: 362 LKDIQVDEKELVYVEAIIRSMTPEERRDPERVLNGS-RKRRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAP 538
Q + MK + ++E ALK K P
Sbjct: 421 EQTKKMMKQFV------------DMEKALKKSGKMP 444
>gi|336436408|ref|ZP_08616120.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
gi|336007273|gb|EGN37298.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
Length = 449
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/435 (48%), Positives = 302/435 (69%), Gaps = 5/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + LT+E++ +++++ ALLEADV+ VV+ F++ V E+AVG
Sbjct: 3 FDSLTEKLQNVFKNLRSKGRLTEEDVKTALKEVKMALLEADVNFKVVKNFIKDVQERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK-SRPTVILLAGLQGVGKTTVSAKL 203
++ G+ P Q ++KIV +ELV LMG E +E+ S TVI++AGLQG GKTT +AKL
Sbjct: 63 QDVMNGLNPGQMVIKIVNEELVALMGSETTEITLQPGSATTVIMMAGLQGAGKTTTTAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A K +GK +LVA DVYRPAAI QL I GE+ GV V++ G + KP+ IAK +E A K
Sbjct: 123 AGKFKLKGKKPLLVACDVYRPAAIKQLQINGEKQGVEVFSMGDKAKPADIAKAAMEHAAK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++VI+DTAGRL ID+ MM EL+++K +N + +LVVDAMTGQ+A + ++FN +IG
Sbjct: 183 NHNNLVILDTAGRLHIDEDMMAELQEIKEAVNVHQTILVVDAMTGQDAVNVASSFNEKIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALS+K V+G PI VG GE++ DLE FYPDRMA RILGMGDVL
Sbjct: 243 IDGVIVTKLDGDTRGGAALSIKAVTGCPILYVGMGEKLSDLEQFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KI 441
+ +EKA + +E A +M +K+ A FDF D+L+ + +MG +S ++GM+PG+G K+
Sbjct: 303 TLIEKAGAELDEEKARQMTQKLKKAQFDFEDYLESMSQMKKMGGLSSIMGMMPGIGGKKM 362
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
E EK + MEAMI +MTPEER P+LL +P R+ R+A+ +G +V+++V Q
Sbjct: 363 PDLDSEENEKKMAQMEAMIYSMTPEERRNPDLL--NPSRKHRIAKGAGVDIAEVNRMVKQ 420
Query: 502 LFQMRVRMKNLMGVM 516
+MR MK L G+M
Sbjct: 421 FNEMRKMMKKLPGLM 435
>gi|357014337|ref|ZP_09079336.1| Ffh [Paenibacillus elgii B69]
Length = 455
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/445 (47%), Positives = 309/445 (69%), Gaps = 3/445 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+S L++ ++KL+G+ LT++++ E +R++R ALLEADV+ VV+ F+ V EQA+G
Sbjct: 3 FEGLSSRLQSVFSKLRGKGKLTEDDVNEALREVRLALLEADVNFKVVKEFIAKVKEQAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P +V IV EL LMGG S+L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVLQSFTPAMVVVDIVNKELTALMGGTQSKLARANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L +Q +L AGD+YRPAAI QL +LGEQ+ VPV++ G +V P +IAKQ L+ AK
Sbjct: 123 KLLLQQNHRPLLAAGDIYRPAAIKQLQVLGEQLKVPVFSLGDKVSPVEIAKQALQHAKDH 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N D +IVDTAGRL ID+++M+ELK + ++P E+LLVVDAMTGQ+A + +F+ ++ +
Sbjct: 183 NNDYLIVDTAGRLHIDESLMEELKQIVEAVSPDEILLVVDAMTGQDAVNVAESFHKQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAA+SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+L+
Sbjct: 243 TGVVLTKLDGDTRGGAAISVKAVTGCPIKFAAMGEKLDALEPFHPERMASRILGMGDMLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F+DFL+Q V ++G + +++ M+PG GKI
Sbjct: 303 LIEKAQASIDADKAKEMERKLRTAEFTFDDFLEQMEQVKKLGPLDQLLDMLPGAGKIKGM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ V+ +K + + A++++MT EER+ P+LL+ S RRKR+A SG + Q V++ + Q
Sbjct: 363 KDVKVDDKQMSRVAAIVKSMTKEERQNPDLLSTS--RRKRLAAGSGNSVQDVNRFIKQFE 420
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLE 528
MR MK G+M L NL+
Sbjct: 421 DMRKMMKQFSGMMGPKGAKQLKNLK 445
>gi|380696278|ref|ZP_09861137.1| signal recognition particle protein [Bacteroides faecis MAJ27]
Length = 440
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 293/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E+ +SRP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVEINL-ESRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEITAIKEAINPDEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PELL S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPELLNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|255655263|ref|ZP_05400672.1| signal recognition particle protein [Clostridium difficile
QCD-23m63]
Length = 452
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 306/453 (67%), Gaps = 11/453 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT+ ++ MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEADVKNAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PT++++ GLQG GKTT + KL
Sbjct: 62 GQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA D+YRPAAI QL ++GE++ +PV+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +MDELK +K + P E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 NANDLVIIDTAGRLHIDEVLMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++KI DF DFL+Q + MG + +++GMIPGMG +
Sbjct: 302 SLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKD 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K +K +A+I++MT ER P +L S R+KR+A+ SG + Q V++L+ Q
Sbjct: 362 QLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNAS--RKKRIARGSGTSVQDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEG-------GSLPALSNL 527
L +M+ MK G + G LP L+ +
Sbjct: 420 LNEMKKMMKMFAGSQKSMKKRGGLGGLPFLNKI 452
>gi|377831263|ref|ZP_09814244.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
gi|377554941|gb|EHT16639.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
Length = 483
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 299/438 (68%), Gaps = 6/438 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFAVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV +EL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNEELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + +Q+GVPV+ GTE P I + G+E+AK+
Sbjct: 123 LRLKNEENARPMFIAADVYRPAAITQLQQVADQIGVPVFEEGTEKDPVDIVRDGMEQAKQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K + P E+LLVVDAMTGQ A FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELVNIKNLTQPNEILLVVDAMTGQNAVKTAQGFNDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ + FD+NDFL+Q V +MG + ++ M+PGM P
Sbjct: 303 TLIEKAQKNFDEEKAQETMDKMRANEFDYNDFLEQMDQVTKMGPLENILKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A+I +MTPEERE P+L+ +P RR+R+A SG+ +V++++ Q
Sbjct: 362 ALKNINIDPKQFAHIKAIILSMTPEERENPDLM--NPSRRRRLAAGSGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGG 519
QMR MK + GG
Sbjct: 420 FNQMRKMMKQVTNGNFGG 437
>gi|258514481|ref|YP_003190703.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778186|gb|ACV62080.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 449
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 304/446 (68%), Gaps = 7/446 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KL+ + +L + ++ E +R++R ALLEADV+ VV+ FV V E+A+
Sbjct: 2 VFSSLAERLQETFKKLRNKGSLKEADVSEALREVRVALLEADVNFKVVKDFVNKVKEKAI 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV EL+ LMGGE S++ A PTVI++ GL G GKTT SAKL
Sbjct: 62 GQDILSSLTPAQQVIKIVHQELMDLMGGEYSKINLAPKPPTVIMMVGLHGAGKTTTSAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN+L+KQG+ +LVAGD++RPAAI QL +LGEQ+ +PV+T G + P+ IA+ +E A
Sbjct: 122 ANFLRKQGRRPLLVAGDIHRPAAIKQLQVLGEQLDIPVFTMGDKQAPAVIARAAIENASN 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +MDEL+ VK + P E+LLVVDAMTGQ+A + FN +
Sbjct: 182 SGRDLVIIDTAGRLHIDEELMDELEAVKSEVKPNEILLVVDAMTGQDAVNVAEVFNRRMQ 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALSVK V+G PIK G GE+++ LE F+PDRMA RILGMGDVL
Sbjct: 242 LNGVIMTKLDGDTRGGAALSVKAVTGCPIKFAGIGEKLDALETFHPDRMADRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ E E+ KKI S F +DFL+Q + V ++G + +V+ M PGMG +
Sbjct: 302 TLIEKAQANFDAEKVAELNKKIRSMEFTLDDFLEQLQQVKKLGPLEQVLSMFPGMGGLKK 361
Query: 444 AQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ E EK L +EA+I++MT +EREKPE++ S R+R+A+ SG + Q+V++L+ Q
Sbjct: 362 IKNLEFDEKELVYVEAIIKSMTHKEREKPEIINGSC--RRRIAKGSGTSVQEVNRLLKQF 419
Query: 503 FQMRVRMKNLMG----VMEGGSLPAL 524
Q + MK + +GG +P +
Sbjct: 420 EQTKKMMKQFSDIDKTIKKGGKMPKI 445
>gi|379795602|ref|YP_005325600.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356872592|emb|CCE58931.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 455
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTETDIKTMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALQHAKD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDNQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|134299902|ref|YP_001113398.1| signal recognition particle protein [Desulfotomaculum reducens
MI-1]
gi|134052602|gb|ABO50573.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfotomaculum reducens MI-1]
Length = 446
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 303/432 (70%), Gaps = 7/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ + LKG+ LT++++ MR+++ ALLEADV+ VV+ FV V +AV
Sbjct: 1 MFKGLGERLDEIFKSLKGKGRLTEDDVNHAMREVKMALLEADVNFKVVKEFVAQVKGRAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIVRDEL +L+GG +++ + PT+I+L GLQG GKTT + KL
Sbjct: 61 GQDVLESLSPAQQVIKIVRDELTELLGGTQAKINLSPKPPTIIMLVGLQGAGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L KQG+ ++VAGD+YRPAAI QL +LG+Q+ +PV++ G E P +IA+ +E+A
Sbjct: 121 AKLLSKQGRRPLMVAGDIYRPAAIKQLQVLGDQLNIPVFSMGQE-NPVKIAQSAVEQANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL I++ +MDEL ++K + P E+LLVVDAMTGQEA + TFN ++G
Sbjct: 180 TGRDLVIIDTAGRLHINEELMDELANIKSTVRPHEILLVVDAMTGQEAVNVADTFNQKLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ++TKLDGD+RGGAALSV++V+G PIK G GE+++ LEPFYPDRMA RILGMGDVL
Sbjct: 240 LDGIVMTKLDGDARGGAALSVRKVTGTPIKFAGMGEKLDALEPFYPDRMADRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ E A ++ KKI A+F+ DFL+Q + V ++G + +V+GMIPGMGK+T
Sbjct: 300 TLIEKAQANFDAEQAAKLNKKIRQADFNLEDFLEQMQQVKKLGPLEQVLGMIPGMGKLT- 358
Query: 444 AQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q+++ + K L +EA+I +MT ER PE + S R+KR+A+ SG Q V+QL+
Sbjct: 359 KQLKDQQLDGKELAQVEAIIYSMTVWERHHPEKIDGS--RKKRIARGSGTRVQDVNQLLK 416
Query: 501 QLFQMRVRMKNL 512
Q Q R MK +
Sbjct: 417 QFEQTRKMMKQI 428
>gi|365118236|ref|ZP_09336957.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
gi|363649905|gb|EHL88998.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
Length = 440
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 303/440 (68%), Gaps = 5/440 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V ++F V +A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKQFTDTVKAKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL LMGG+ ++ S P VIL++GLQG GKTT S KL
Sbjct: 61 GMDVLTAVKPSQLMVKIVHDELALLMGGDSVDVNITGS-PAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+GK +LVA DVYRPAAI+QL +LGEQ+G+PVY+ P QIA+ +++A+
Sbjct: 120 AQLLKGKRGKKPLLVACDVYRPAAIEQLKVLGEQIGIPVYSEPDCKNPVQIAQNAIKQAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ D+VIVDTAGRL +D+ MM E+K +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 QDGQDLVIVDTAGRLAVDEEMMREIKAIKDAINPNEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS++ V KPIK VG GE+M+ L+ F+P RMA RILGMGD+
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKMDALDVFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF+ Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFISQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PELL S RR+R+A+ SG + Q+V++L+ Q
Sbjct: 360 -KDIDIDDNAFKSVEAIIYSMTPKERSNPELLNGS--RRQRIAKGSGTSIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLP 522
Q R MK + G G +P
Sbjct: 417 DQTRKMMKMVAGGKMGKMMP 436
>gi|167761983|ref|ZP_02434110.1| hypothetical protein BACSTE_00328 [Bacteroides stercoris ATCC
43183]
gi|167700215|gb|EDS16794.1| signal recognition particle protein [Bacteroides stercoris ATCC
43183]
Length = 440
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 298/442 (67%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKSFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ S+P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSEPDSKDPVSIAQNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEEMMNEIAAIKSAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDIDIDDNAFKSIEAIIYSMTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|255692684|ref|ZP_05416359.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
gi|260621568|gb|EEX44439.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
Length = 440
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 292/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ SRP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DSRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y P +IA+ ++EAK
Sbjct: 120 ARMLKSKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|373111972|ref|ZP_09526207.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419840623|ref|ZP_14364011.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|371656540|gb|EHO21865.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386907566|gb|EIJ72273.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 449
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 313/444 (70%), Gaps = 8/444 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L S + + K++G L++ NI + +++++ +LLEADV+ VV+ F++++ E+A+
Sbjct: 1 MLDNLGSRFQEIFKKVRGHGKLSESNIKDALKEVKMSLLEADVNYKVVKDFIESIREKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++G+ P QQ +K+V DELV+L+GG + L A PTV++L+GLQG GKTT + KL
Sbjct: 61 GTEVLKGINPGQQFIKLVNDELVELLGGTNARLTKASKNPTVLMLSGLQGAGKTTFAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LVA DVYRPAAI QL +LGEQV V VY I ++ LE+AK+
Sbjct: 121 AKFLKKQNERVLLVAADVYRPAAIKQLQVLGEQVEVSVYAEEGHQDVLGICERALEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ +I+DTAGRL ID+ +M+ELK++KR+ P E+LLVVD+M GQ+A L +FN +
Sbjct: 181 EHDTYMIIDTAGRLHIDETLMEELKNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNENLS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+
Sbjct: 241 IDGVVLTKLDGDTRGGAALSIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ +++E+A+ +++KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I
Sbjct: 301 SLVEKAQSAIEEEEAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI-- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT +ER+KPE+L S R++R+A+ SG +++L+ Q
Sbjct: 359 GDLAPAEKEMKKVEAIIQSMTKQERKKPEILKAS--RKQRIAKGSGTDVADINRLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNL 527
QM+ MK + GG +P NL
Sbjct: 417 QMKTMMK----MFAGGKMPNFPNL 436
>gi|198275694|ref|ZP_03208225.1| hypothetical protein BACPLE_01869 [Bacteroides plebeius DSM 17135]
gi|198271323|gb|EDY95593.1| signal recognition particle protein [Bacteroides plebeius DSM
17135]
Length = 443
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 295/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGG+ +E+ K RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTTLMGGDTAEIEL-KGRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +K K+ + +LVA DVYRPAAI+QL +LG+Q+ VPVY+ P QIA ++EAK
Sbjct: 120 ARMMKSKKNRKPLLVACDVYRPAAIEQLKVLGQQIEVPVYSELDSKDPVQIALNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL ID+ MM+E++ +K+ +NP L VVDAMTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAIDEQMMNEIEAIKKAINPDATLFVVDAMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS++ V KPI VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIRTVVNKPIMFVGTGEKLDAVDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIQKNQFDFNDFLTQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER PE+L + RR R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERTHPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|423302186|ref|ZP_17280209.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
gi|408471277|gb|EKJ89809.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
Length = 440
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 293/430 (68%), Gaps = 9/430 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ SRP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DSRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y P +IA+ ++EAK
Sbjct: 120 ARMLKSKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE++E ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFIGTGEKLEAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+G
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVG--- 356
Query: 443 PA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
PA + + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+
Sbjct: 357 PALKNIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLK 414
Query: 501 QLFQMRVRMK 510
Q Q R MK
Sbjct: 415 QFDQTRKMMK 424
>gi|304404220|ref|ZP_07385882.1| signal recognition particle protein [Paenibacillus curdlanolyticus
YK9]
gi|304347198|gb|EFM13030.1| signal recognition particle protein [Paenibacillus curdlanolyticus
YK9]
Length = 449
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 297/422 (70%), Gaps = 3/422 (0%)
Query: 96 WNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQ 155
+ KL+G+ L+++++ E MR++R ALLEADV+ VV+ FV V EQAVG+ + + P
Sbjct: 2 FGKLRGKGKLSEDDVNEAMREVRLALLEADVNFKVVKDFVAKVKEQAVGIEVQKSFTPGM 61
Query: 156 QLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCM 215
+V IV EL++LMGG +++ A PTVIL+AGLQG GKTT +AKLA L K +
Sbjct: 62 VVVDIVHKELIELMGGSATQIAKASKPPTVILMAGLQGAGKTTTTAKLAKMLMKNNHKPL 121
Query: 216 LVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAG 275
L+AGD+YRPAAI QL +LGEQ+G V+T G +V P +IA+QGL+ AK + D VIVDTAG
Sbjct: 122 LIAGDIYRPAAIKQLQVLGEQIGAQVFTLGNDVSPVEIARQGLQHAKANSFDYVIVDTAG 181
Query: 276 RLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGD 335
RLQID+A+MDE+K + V+ P EVLLVVDAMTGQEA + +F+ ++ +TG +LTKLDGD
Sbjct: 182 RLQIDEALMDEIKQIHAVVEPDEVLLVVDAMTGQEAVNVAQSFHEQLELTGVVLTKLDGD 241
Query: 336 SRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQ 395
+RGGAALSVK V+G PIK V GE++E LE F+P+RMA RILGMGD+LS +EKAQ +
Sbjct: 242 TRGGAALSVKAVTGCPIKFVATGEKIEPLEAFHPERMASRILGMGDMLSLIEKAQSNIDA 301
Query: 396 EDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLK 454
+ A EM++K+ +A F F DFL Q V ++G + +++ M+PGM K+ + ++ +K +
Sbjct: 302 DKAAEMERKMRNAEFTFEDFLDQMEQVRKLGPLDQLLDMLPGMNKVKGLKDMKVDDKQIG 361
Query: 455 IMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 514
+EA++ +MT +E+ P+LL S RR+R+A SG V++L+ Q +MR MK G
Sbjct: 362 RVEAIVRSMTTDEKRNPDLLNYS--RRRRIAAGSGTQIADVNRLIKQFDEMRKMMKQFSG 419
Query: 515 VM 516
+M
Sbjct: 420 MM 421
>gi|239636284|ref|ZP_04677286.1| signal recognition particle protein [Staphylococcus warneri L37603]
gi|417643578|ref|ZP_12293620.1| signal recognition particle protein [Staphylococcus warneri VCU121]
gi|445059843|ref|YP_007385247.1| signal recognition particle protein [Staphylococcus warneri SG1]
gi|239597639|gb|EEQ80134.1| signal recognition particle protein [Staphylococcus warneri L37603]
gi|330685685|gb|EGG97326.1| signal recognition particle protein [Staphylococcus epidermidis
VCU121]
gi|443425900|gb|AGC90803.1| signal recognition particle protein [Staphylococcus warneri SG1]
Length = 455
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A+ +++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VSE+A+G
Sbjct: 3 FEGLSDRLQASMQRMRGKGKVTEADIKAMMREVRLALLEADVNFKVVKDFVKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL LMGGE S + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTNLMGGENSTIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVAGD+YRPAAIDQL +G+Q+ VPVY+ G +VKP QI + L AK+
Sbjct: 123 LLMRKKYNKKPMLVAGDIYRPAAIDQLQTVGKQLDVPVYSEGDQVKPQQIVQNALAHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEIAKPDEIMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + Q+ A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQDKAKDLEKKMRDSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q+ ++K + ++A+I++MTP ER P +L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDQLNMSDKQIDHIKAIIQSMTPSERANPAMLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|427386247|ref|ZP_18882444.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
gi|425726287|gb|EKU89152.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
Length = 439
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E V + +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAE-VDLEGKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+GVP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNKKPLLVACDVYRPAAIEQLRVLAEQIGVPMYSEPDSKSPVKIAENAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEEMMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P LL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|315303701|ref|ZP_07874216.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
gi|313627928|gb|EFR96546.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
Length = 450
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTNLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 DHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAESFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG GK+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGAGKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMQVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 TEMKKMMKQM 430
>gi|322387559|ref|ZP_08061168.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|419843114|ref|ZP_14366438.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|321141426|gb|EFX36922.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|385703216|gb|EIG40342.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
Length = 521
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ +I E ++IR ALLEADV+LPVV+ F++ + E+AVG
Sbjct: 3 FENLTERLQNVFKNLRKKGKITESDIQEATKEIRLALLEADVALPVVKDFIKKIRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL +++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVNEELTEVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEDARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKTLAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 VTGIILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALQNMKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|160886334|ref|ZP_02067337.1| hypothetical protein BACOVA_04343 [Bacteroides ovatus ATCC 8483]
gi|299146818|ref|ZP_07039886.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|336414589|ref|ZP_08594935.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|423289502|ref|ZP_17268352.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
gi|423297356|ref|ZP_17275417.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|156108219|gb|EDO09964.1| signal recognition particle protein [Bacteroides ovatus ATCC 8483]
gi|298517309|gb|EFI41190.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|335933701|gb|EGM95703.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|392666997|gb|EIY60508.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|392667213|gb|EIY60723.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
Length = 440
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 293/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ +RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DARPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE++E ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|385260553|ref|ZP_10038697.1| signal recognition particle protein [Streptococcus sp. SK140]
gi|385191103|gb|EIF38527.1| signal recognition particle protein [Streptococcus sp. SK140]
Length = 521
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/437 (48%), Positives = 303/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ +I E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FENLTERLQNVFKNLRKKGKITESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL +++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVNEELTEVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEDARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIAAGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|302389629|ref|YP_003825450.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
gi|302200257|gb|ADL07827.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
Length = 446
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 298/428 (69%), Gaps = 3/428 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT LEA + KL+G+ L++ ++ + MR+++ ALLEADV+ VV+ F+Q V+E+AVG
Sbjct: 3 FEALTQKLEAVFKKLRGKGKLSEADVKQAMREVKLALLEADVNYKVVKDFIQKVTERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL KLMG + + L + S+ V+++ GLQG GKTT S KL
Sbjct: 63 QEVLESLTPAQQVIKIVNDELTKLMGPKEARLNISPSKVNVVMMVGLQGSGKTTTSGKLG 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
YL K+GK +LVA D+YRPAAI QL ++GE++G+PV+T G E P I+K +E A +
Sbjct: 123 LYLSKKGKRPLLVAADIYRPAAIKQLQVVGEKIGLPVFTMG-EQNPVNISKAAVEYASRH 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N DVVI+DTAGRL +D +M EL ++K +NP E+LLVVD+MTGQ+A + TF+ ++ +
Sbjct: 182 NNDVVIIDTAGRLHVDDELMQELINIKDAVNPDEILLVVDSMTGQDAVNVAETFHNKLQL 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS+K V+G PIK VG GE++ DLEPFYP+RMA RILGMGDVLS
Sbjct: 242 TGLILTKLDGDTRGGAALSIKAVTGCPIKFVGMGEKLTDLEPFYPERMASRILGMGDVLS 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKA + Q A E+++KI F +DFL+Q + V +MGS+ +++ MIPG+
Sbjct: 302 LIEKATAAIDQNKARELEEKIRKEEFTLDDFLEQLKQVRKMGSLDQILSMIPGLSPQKLQ 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
V EK L +EA+I +MT EER P ++ S RR+R+A SG + Q V++L+ Q Q
Sbjct: 362 GVEFNEKELVHIEAIINSMTKEERMNPSIINGS--RRRRIAMGSGTSVQDVNRLLKQFEQ 419
Query: 505 MRVRMKNL 512
+ +K L
Sbjct: 420 TKKMVKQL 427
>gi|336324196|ref|YP_004604163.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
gi|336107777|gb|AEI15595.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
Length = 449
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/426 (46%), Positives = 298/426 (69%), Gaps = 7/426 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L++ + K++GE +T++NI E +R ++ A+LEADV+ VV++F+ V E+A+
Sbjct: 1 MFNTLNEKLQSVFKKMRGEARITEDNIKEAIRQVKMAMLEADVNYKVVKKFISGVQEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGE---VSELVFAKSRPTVILLAGLQGVGKTTVS 200
G +++ + DQ +KIV DEL ++GGE S++ + + PT+I+L GLQG GKTT +
Sbjct: 61 GEEVLKSLSADQVFIKIVNDELTSILGGEDPSASKITLSSTPPTIIMLVGLQGSGKTTTA 120
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
KLA + +K K ++VA D+YRPAAIDQL +LG+Q+GV VY+ IA++ E
Sbjct: 121 GKLAKHFQKNDKRVLMVADDIYRPAAIDQLEVLGKQLGVDVYSDKDNKNAVDIAQKSYEY 180
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
AKK D+VI+DTAGRL ++ +MDEL ++K+ ++P E+L V DAMTGQ+A + T FN
Sbjct: 181 AKKSAKDIVIIDTAGRLHVNNELMDELFNIKKAVSPDEILFVADAMTGQDAVNVATKFNN 240
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
++ I+G ILTKLDGD+RGGAALS++EV+GKP+K VG GE+++ EPFYPDRMA RILGMG
Sbjct: 241 DLDISGVILTKLDGDARGGAALSIREVTGKPLKYVGVGEKLDAFEPFYPDRMASRILGMG 300
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
DV+S VE AQ+ +++++AE++ K+ DFND L Q + + +MGS ++ ++PGMG
Sbjct: 301 DVVSLVEMAQDAIEEDEAEKLADKVSKGGMDFNDMLSQFKMIRKMGSFESIMKLMPGMGN 360
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ A V E + +K +EA+I +MTP ER +LL S R+KR+A+ SG + V++L++
Sbjct: 361 MKKADVDEDQ--IKKIEAIINSMTPRERRYYKLLNGS--RKKRIARGSGTSVSDVNKLIS 416
Query: 501 QLFQMR 506
QL QM
Sbjct: 417 QLQQMN 422
>gi|329955639|ref|ZP_08296547.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
gi|328526042|gb|EGF53066.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
Length = 440
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 298/442 (67%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKSFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ S+P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSEPDSKDPVAIAQNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEEMMNEIAAIKAAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|189467237|ref|ZP_03016022.1| hypothetical protein BACINT_03622 [Bacteroides intestinalis DSM
17393]
gi|189435501|gb|EDV04486.1| signal recognition particle protein [Bacteroides intestinalis DSM
17393]
Length = 439
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ + +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEIDL-EGKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAA++QL +L EQ+GVP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNKKPLLVACDVYRPAAVEQLRVLAEQIGVPMYSEPDSKNPVKIAENAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEEMMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P LL S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|333979545|ref|YP_004517490.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823026|gb|AEG15689.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 456
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/433 (49%), Positives = 301/433 (69%), Gaps = 8/433 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KLK + LT+ ++ E M+++RRALL ADV+ VV+ FV V E+AV
Sbjct: 2 VFEGLAEKLQETFRKLKSKGRLTEADVDEAMKEVRRALLAADVNFQVVKSFVARVKERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIVRDEL LMGG S+L A PT++++ GL G GKTT +AKL
Sbjct: 62 GQDVLSSLTPAQQVIKIVRDELAGLMGGTQSKLNLAPKPPTIVMMVGLHGAGKTTTAAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN ++KQG+ MLVAGDVYRPAAI QL +LGEQ+G+PV++ G P IA+ +E A K
Sbjct: 122 ANLMRKQGRRPMLVAGDVYRPAAIKQLQVLGEQLGIPVFSMGDRHTPVDIARAAVEHAVK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+VI+DTAGRL+I++ MM EL+ +K + P E+LLVVDAMTGQ A + TFN +G
Sbjct: 182 QGRDLVIIDTAGRLEINEEMMAELETLKAAVRPHEILLVVDAMTGQVAVNIAETFNKRLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS+K V+G PIK VG GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 242 LDGVVLTKLDGDTRGGAALSIKAVTGCPIKFVGVGEKLDALEPFHPDRMADRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ E + KKI SA+F +DFL+Q + V ++G + ++I MIPG+G +
Sbjct: 302 TLIEKAQANFDAEQVARLNKKIRSADFTLDDFLEQLQEVKKLGPIQQIISMIPGLGNMK- 360
Query: 444 AQVREA----EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+++E ++ L +EA+I++MTP ER P + S RR+R+A+ SG T Q+V+ ++
Sbjct: 361 -KLKELGDIDDRELVYVEAIIKSMTPWERAHPHEINGS--RRRRIARGSGTTVQKVNSVL 417
Query: 500 AQLFQMRVRMKNL 512
Q Q R M+ L
Sbjct: 418 KQFEQTRKMMRQL 430
>gi|319901661|ref|YP_004161389.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
gi|319416692|gb|ADV43803.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
Length = 440
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 297/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ S+P+VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DSKPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EAK
Sbjct: 120 ARMLKAKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSEPDSKDPVTIAQNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+K D+VIVDTAGRL +D+ MM+E+ +K+ ++P E+L VVD+MTGQ+A FN +
Sbjct: 180 EKGYDLVIVDTAGRLAVDEEMMNEIAAIKKAIDPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVILTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLNQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIHSMTPAERSNPEILNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|375008167|ref|YP_004981800.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287016|gb|AEV18700.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 446
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 304/420 (72%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ N+++G+ +T+ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLSERLQQVMNRIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL LMGGE S++ AK PTV+++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTALMGGEQSKIAVAKKPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+K + +LVA DVYRPAAI QL LG+Q+ VPV++ G + P +IAKQ LE AK+
Sbjct: 123 NLLRKRHNRKPLLVAADVYRPAAIKQLETLGKQLNVPVFSLGEDANPVEIAKQALERAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+A+MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDEALMDELKQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+G PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A F +DFL Q V ++G + ++ M+PG KI
Sbjct: 303 TLIEKAQAAVDEEKAKELEQKMRTATFTLDDFLDQLGQVRKLGPLDEILKMLPGANKIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK + +EA+I +MT EE+ PE++ S R++R+A+ SG T Q V++L+ Q
Sbjct: 363 LSNIQVDEKQIARVEAIIRSMTKEEKMHPEIINAS--RKRRIAKGSGTTVQDVNRLLKQF 420
>gi|227530556|ref|ZP_03960605.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
gi|227349562|gb|EEJ39853.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
Length = 484
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 304/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFAVVKDFVKKVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL +LMG E L + PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTELMGEEAVPLNKSSHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + K+ + +A DVYRPAAI QL + +Q+ VPV+ GT+V P +I +QG+E AK+
Sbjct: 123 LRLKNEDKARPLFIAADVYRPAAITQLKQVADQIDVPVFEKGTDVDPVEIVRQGMEVAKQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K+++NP E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKQLVNPDEILLVIDSMTGQNAVNTAQGFDDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+ K+ FDFNDFL Q V +MG + +I M+PGM P
Sbjct: 303 TLIEKAQKDFDEEQAQATMDKMRENTFDFNDFLSQMDQVTKMGPLENIIKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K L + A+I +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNLNLDPKQLDHIRAIIYSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR MK + G+ + N+
Sbjct: 420 FNQMRKMMKQV----TNGNFNGMQNM 441
>gi|167769126|ref|ZP_02441179.1| hypothetical protein ANACOL_00449 [Anaerotruncus colihominis DSM
17241]
gi|167668766|gb|EDS12896.1| signal recognition particle protein [Anaerotruncus colihominis DSM
17241]
Length = 459
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/423 (50%), Positives = 299/423 (70%), Gaps = 4/423 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L A + K++ + L + +I E MR++R ALLEADV+ V + FV AV+E+AVG
Sbjct: 3 FEGLSGKLSAVFKKMRNKGKLKESDIKEAMREVRLALLEADVNYKVAKDFVAAVTEKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P Q +VKIV DEL LMG + L F+ PT++++ GLQG GKTT SAKLA
Sbjct: 63 DEVLESLTPAQMVVKIVNDELTNLMGETGARLNFSSRPPTIVMMCGLQGSGKTTHSAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+ ++QGK +LVA DVYRPAAI+QL ++GE+ GVPV+ G + P +IA++ + AK
Sbjct: 123 LHFREQGKRPLLVACDVYRPAAIEQLKVVGEKAGVPVFDMG-QGDPVEIARRAVMHAKDH 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D+VI+DTAGRL ID+A+MDELK ++ ++P E+LLVVDAM GQ+A + + F+ +GI
Sbjct: 182 GNDLVILDTAGRLHIDEALMDELKRIRDEVSPQEILLVVDAMVGQDAVNVASAFDEALGI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALSV+ V+GKP+K VG GE++ DLEPFYPDRMA RILGMGDVL+
Sbjct: 242 SGVILTKLDGDTRGGAALSVRAVTGKPVKFVGTGEKLGDLEPFYPDRMASRILGMGDVLT 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITP 443
+EKAQ + A EM +K+ F+FND L Q + + +MG +S VI M+PG+ GK+
Sbjct: 302 LIEKAQSDFDAKQAAEMAQKMRQNTFNFNDMLAQMQQLKKMGPLSSVINMLPGVAGKLDD 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q + E+ L+ EA+I++MTP EREKP L+ +P R++R+A SG + V++L+ Q
Sbjct: 362 EQAEQGERELRRTEAIIQSMTPAEREKPSLI--NPARKRRIAAGSGTRVEDVNRLLRQNE 419
Query: 504 QMR 506
QM+
Sbjct: 420 QMQ 422
>gi|406669313|ref|ZP_11076592.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
gi|405583826|gb|EKB57757.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
Length = 496
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/466 (45%), Positives = 315/466 (67%), Gaps = 22/466 (4%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A + L +T+ ++ + MR+IR ALLEADV+ VV+ FV+ V+E+A+G
Sbjct: 3 FEGLSERLQGAVSSLGAGGKITEADLKQMMREIRLALLEADVNFQVVKTFVKRVNERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL LMGGE + L +K PTVI++AGLQG GKTT KL
Sbjct: 63 SDVLESLSPAQQVVKIVNEELTDLMGGEQAPLNISKQPPTVIMMAGLQGAGKTTTVGKLT 122
Query: 205 NYLKK--QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
NYL K Q +LVA DVYRPAAIDQL +G+Q+G V+ GT+V P Q+A L AK
Sbjct: 123 NYLSKHHQLNRPLLVAADVYRPAAIDQLQTIGQQIGAEVFAQGTDVNPVQLATDALAHAK 182
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVI+DTAGRL +++ +M+EL+++K ++P E+LL VDAMTGQ+A + FN +
Sbjct: 183 LQGNDVVIIDTAGRLHVNEELMNELRNIKSAVHPDEILLTVDAMTGQDATNVAEAFNDAL 242
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
ITG I+TKLDGD+RGGAALS++ ++ KPIK G+GE+++ LEPF+PDRMAGRILGMGD+
Sbjct: 243 DITGVIITKLDGDTRGGAALSIRAITEKPIKFTGQGEQLDALEPFHPDRMAGRILGMGDM 302
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ +EKAQ+ + +AE M +KI A+FDFNDF++Q V +MG + ++ +IPG+ KI
Sbjct: 303 LTLIEKAQQDFDEAEAERMAEKIKDASFDFNDFIQQMDQVTKMGPLKDLMKLIPGVNKI- 361
Query: 443 PA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
P Q ++K + ++ ++ +MTPEERE P+++++S RR+R+A+ SG+ +V+QL+
Sbjct: 362 PGFDQFDVSDKDMARLKGIVMSMTPEERENPDIISQS--RRRRIARGSGRELNEVNQLIK 419
Query: 501 QLFQ---------------MRVRMKNLMGVMEGGSLPALSNLEDAL 531
Q Q MR MK + + +G +P + +L + +
Sbjct: 420 QFNQTRKMMSQMSQGKNGSMRKMMKQMKNLPKGQGMPDMGDLSNLM 465
>gi|386830772|ref|YP_006237426.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417797950|ref|ZP_12445136.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21310]
gi|334277072|gb|EGL95311.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21310]
gi|385196164|emb|CCG15785.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
Length = 455
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE S + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENSSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|340754763|ref|ZP_08691499.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|421499991|ref|ZP_15947014.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|313685772|gb|EFS22607.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|402269092|gb|EJU18438.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 449
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/444 (46%), Positives = 313/444 (70%), Gaps = 8/444 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L S + + K++G L++ NI + +++++ +LLEADV+ VV+ F++++ E+A+
Sbjct: 1 MLDNLGSRFQEIFKKVRGHGKLSESNIKDALKEVKMSLLEADVNYKVVKDFIESIREKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++G+ P QQ +K+V DEL++L+GG + L A PTV++L+GLQG GKTT + KL
Sbjct: 61 GTEVLKGINPGQQFIKLVNDELIELLGGTNARLTKASKNPTVLMLSGLQGAGKTTFAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKKQ + +LVA DVYRPAAI QL +LGEQV V VY I ++ LE+AK+
Sbjct: 121 AKFLKKQNERVLLVAADVYRPAAIKQLQVLGEQVEVSVYAEEGHQDVLGICERALEKAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ +I+DTAGRL ID+ +M+ELK++KR+ P E+LLVVD+M GQ+A L +FN +
Sbjct: 181 EHDTYMIIDTAGRLHIDETLMEELKNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNENLS 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+
Sbjct: 241 IDGVVLTKLDGDTRGGAALSIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ +++E+A+ +++KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I
Sbjct: 301 SLVEKAQSAIEEEEAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI-- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I++MT +ER+KPE+L S R++R+A+ SG +++L+ Q
Sbjct: 359 GDLAPAEKEMKKVEAIIQSMTKQERKKPEILKAS--RKQRIAKGSGTDVADINRLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNL 527
QM+ MK + GG +P NL
Sbjct: 417 QMKTMMK----MFAGGKMPNFPNL 436
>gi|126698849|ref|YP_001087746.1| signal recognition particle protein [Clostridium difficile 630]
gi|115250286|emb|CAJ68108.1| Signal recognition particle protein [Clostridium difficile 630]
Length = 450
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 299/433 (69%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT+ ++ MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PT++++ GLQG GKTT + KL
Sbjct: 62 GQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA D+YRPAAI QL ++GE++ +PV+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLNHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +MDELK +K + P E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 NANDLVIIDTAGRLHIDEVLMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++KI DF DFL+Q + MG + +++GMIPGMG +
Sbjct: 302 SLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKD 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K +K +A+I++MT ER P +L S R+KR+A+ SG + Q V++L+ Q
Sbjct: 362 QLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMG 514
L +M+ MK G
Sbjct: 420 LNEMKKMMKMFAG 432
>gi|374376095|ref|ZP_09633753.1| signal recognition particle protein [Niabella soli DSM 19437]
gi|373232935|gb|EHP52730.1| signal recognition particle protein [Niabella soli DSM 19437]
Length = 446
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 295/432 (68%), Gaps = 9/432 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L LE+A+ LKG+ +T+ N+ +++IRRAL++ADV+ + + F + E+A
Sbjct: 1 MFNNLQDKLESAFKNLKGQARITELNVASTIKEIRRALVDADVNYKIAKEFTDKIREKAT 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVF-AKSRPTVILLAGLQGVGKTTVSAK 202
G ++ + P Q +VKIV+DEL +LMGGE E VF AK P VIL+AGLQG GKTT S K
Sbjct: 61 GEKVLNAISPGQLMVKIVKDELTELMGGE--EAVFNAKGNPAVILIAGLQGSGKTTFSGK 118
Query: 203 LANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
LANYLK K+G S +LVA D+YRPAA++QL +LGEQ+GV VY IAK + E+
Sbjct: 119 LANYLKSKKGLSPLLVAADIYRPAAMEQLRVLGEQIGVEVYIEPENKDAVSIAKNAIAES 178
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
K +N +V+I+DTAGRL +D+ MM E+ D+K +NP E+L VVD+MTGQ+A FN
Sbjct: 179 KSRNKNVIIIDTAGRLAVDEQMMTEVADIKNAVNPQEILFVVDSMTGQDAVNTAKAFNER 238
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+ +G +LTKLDGD+RGGAALS+K KPIK V GE+M+ L+ FYP+RMA RILGMGD
Sbjct: 239 LDFSGVVLTKLDGDTRGGAALSIKYTVNKPIKFVSNGEKMDALDVFYPERMAQRILGMGD 298
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-K 440
+ + VE+AQ+ +E A++++ KI FDF DF Q + +MG+M ++GMIPG+G K
Sbjct: 299 ITTLVERAQQQFDEEQAKKLESKIRKNKFDFADFKAQLDQIKKMGNMKDLLGMIPGVGAK 358
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
I + +++S K +EAMI++MTPEER P+++ S RRKR+A SGK +V+ +
Sbjct: 359 IKDLDI--SDESFKGIEAMIDSMTPEERSNPDIINGS--RRKRIATGSGKDIAEVNAFMK 414
Query: 501 QLFQMRVRMKNL 512
Q QMR MKN+
Sbjct: 415 QFEQMRDMMKNM 426
>gi|373462521|ref|ZP_09554240.1| signal recognition particle protein [Prevotella maculosa OT 289]
gi|371948085|gb|EHO65975.1| signal recognition particle protein [Prevotella maculosa OT 289]
Length = 449
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/462 (47%), Positives = 305/462 (66%), Gaps = 14/462 (3%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F +V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGQITEINVAETLKDVRRALLDADVNFKVAKTFTDSVKQKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q LVK+V DEL LMGG+ +EL + RP VIL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLLVKVVHDELADLMGGDTAELKL-EGRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ + +LVA DVYRPAAI QL ++GEQ+GVPVY+ IA+ + EAK
Sbjct: 120 ANLLKNKKNRKPLLVACDVYRPAAIAQLKVVGEQIGVPVYSEPDSKDVVAIAEGAVREAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM E+ ++K L+P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEEMMIEISNLKNSLHPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEAIDVFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 K-DVDIDDNAFKGIEAIIKSMTPKERTSPEILNTS--RRQRIAKGSGTNIQEVNKLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTARR 544
Q R MK + G G + + + PG A+R
Sbjct: 417 DQTRKMMKTITGNQMAGMMSRMKGMN---------IPGMAKR 449
>gi|417903373|ref|ZP_12547220.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21269]
gi|341849994|gb|EGS91127.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21269]
Length = 455
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKAKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|29347011|ref|NP_810514.1| signal recognition protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383125386|ref|ZP_09946027.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
gi|29338909|gb|AAO76708.1| putative signal recognition protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837780|gb|EES65870.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
Length = 440
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 293/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E+ +SRP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVEINL-ESRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEITAIKEAINPDEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|335429766|ref|ZP_08556664.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
gi|334889776|gb|EGM28061.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
Length = 472
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/419 (47%), Positives = 299/419 (71%), Gaps = 4/419 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A K+ G+ L +++I MR++R +LLEADV+ VV++F V E+A+G
Sbjct: 3 FDSLSDRLQGALKKVTGKGKLNEKDIENMMREVRLSLLEADVNYKVVKQFTNEVKEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV +EL +LMG + + F TVI+L GLQG GKTT + KLA
Sbjct: 63 EKVLKSLSPGQQVVKIVHEELKQLMGEDAHGVAFKGHGTTVIMLVGLQGAGKTTHAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NY+ KK K ++VA D+YRPAAIDQL +G+Q+ VPV++ GT+V P +IAK+ L++A +
Sbjct: 123 NYMRKKHNKKPLMVAADIYRPAAIDQLETVGKQLNVPVFSMGTDVSPVEIAKKALQQATE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+A+MDEL+ VK + P E+LL VDAMTGQ+A + +F+ ++
Sbjct: 183 NKNDLVIIDTAGRLHIDEALMDELQQVKEIAKPDEILLTVDAMTGQDAVTVADSFHKQLN 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAILTKLDGD+RGGAALS+++V+G PIK +G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 VTGAILTKLDGDTRGGAALSIRKVTGVPIKFMGLGEQLDKIEVFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ + +E+A +M KK A FD+NDF KQ + + R+G++ ++ MIPGMGK
Sbjct: 303 TLIEKAQDAIDEEEAMDMAKKFKEATFDYNDFKKQIKQIKRLGNLKGIMKMIPGMGK-QL 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V +K +EA+I +MT EER P L++ S RR+R+A+ +G+ +V++++ Q
Sbjct: 362 NNVDIDDKQFNYIEAIINSMTKEERRNPNLMSSS--RRRRIAEGAGRNISEVNRIIKQF 418
>gi|303237098|ref|ZP_07323668.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
gi|302482485|gb|EFL45510.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
Length = 447
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 303/445 (68%), Gaps = 5/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLDRSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L +++P +IL++GLQG GKTT + KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGETVGLTL-ENKPAIILMSGLQGSGKTTFTGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI+QL ++GE VGVPVY+ + IA+ + EAK
Sbjct: 120 ANLLKTKEHKKPLLVACDVYRPAAIEQLKVVGESVGVPVYSEPESKDVNAIAEHAIREAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGRL +D MM+E++ +K +NP EVL VVD+MTGQ+A FN +
Sbjct: 180 ANGNDVVIIDTAGRLAVDTEMMNEIESLKNHVNPDEVLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME L+ F+P+RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEALDVFHPNRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+++QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKKLQKKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S R++R+A+ SG Q+V++LV Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEVLNNS--RKQRIAKGSGTNIQEVNRLVKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q R MK + G G + + N+
Sbjct: 417 DQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|347542415|ref|YP_004857052.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985451|dbj|BAK81126.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 454
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/435 (45%), Positives = 304/435 (69%), Gaps = 4/435 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ + KL+G+ L++++I MR+++ ALLE+DV+ VV+ F+ VSE+++G
Sbjct: 3 FDSLASKLQGVFKKLRGKGKLSEQDIKLAMREVKLALLESDVNYKVVKTFISRVSEKSLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL +MG + S+L + + TVI+L GLQG GKTT++AKL+
Sbjct: 63 KEVLESLTPAQQVIKIVNDELKSIMGNDQSKLNYNSNSTTVIMLVGLQGAGKTTMAAKLS 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
Y +K GKS +++A DVYRPAA+ QL +LG Q+ +PV++ P I ++GLE+A+
Sbjct: 123 LYCRKSGKSPLMIACDVYRPAAVKQLEVLGNQIDIPVFSIPDSKDPLNIVRKGLEKAESN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID +MDEL+++K + NP+E+L+V+D+M GQE+ + TFN ++ +
Sbjct: 183 MNNVVIIDTAGRLHIDDNLMDELREIKEISNPSEILMVIDSMIGQESVNIAETFNEKLDV 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGG ALS+KEV GK IK +G GE++ DLE F+PDRMA RILGMGDVLS
Sbjct: 243 TGFVLTKLDGDTRGGVALSIKEVIGKNIKFIGVGEKISDLEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----K 440
+EKAQE + QE+A+++ +++ + F+F DF + ++GS S+++ MIPG+G +
Sbjct: 303 LIEKAQESIDQEEAQKLSERMFANEFNFEDFKSAMHQMKKLGSFSKILQMIPGIGNAMKE 362
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ + ++EK L +EA+I +MT +ER+ P+LL S R+ R+A+ SG T QV++L+
Sbjct: 363 LKNINLDDSEKELSKIEAIINSMTAKERKNPKLLIGSASRKSRIAKGSGSTTAQVNKLIK 422
Query: 501 QLFQMRVRMKNLMGV 515
M MK G+
Sbjct: 423 DFENMSKMMKQFKGM 437
>gi|145219743|ref|YP_001130452.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeovibrioides DSM 265]
gi|145205907|gb|ABP36950.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeovibrioides DSM 265]
Length = 449
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/430 (51%), Positives = 294/430 (68%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A+ KL G+ T+ + NI MRDI+RALL ADV+ VV++ V+ V ++++
Sbjct: 1 MFESLSDKLEGAFKKLAGQATINEINIGIAMRDIKRALLGADVNYKVVKKLVEDVRQKSL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAK 202
G G+I+ V P Q +VKIV DEL +LMGGE L + SR P V+++AGLQG GKTT +AK
Sbjct: 61 GEGVIKSVSPAQMIVKIVSDELTELMGGEQKPLALSSSRLPAVVMVAGLQGSGKTTFAAK 120
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LA LKK G++ +LVA DVYRPAA+DQL LG +V VPV++ E ++A QGLE AK
Sbjct: 121 LAKRLKKSGRNPLLVAADVYRPAAVDQLKTLGAEVSVPVFSI-EEKDAMKVAMQGLEAAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DV+IVDTAGRLQID AMM E + +K L P E+L VVD+M GQEA FN +
Sbjct: 180 AGAHDVLIVDTAGRLQIDDAMMAEAEALKNALKPDELLFVVDSMMGQEAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGDSRGGAALS++ V KPIK + GE+++DL+ FYPDRMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDSRGGAALSIRHVVEKPIKFMSVGEKVDDLDQFYPDRMAQRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+SFVEKAQE + E +MQKK+M FD NDF Q + + +MGSM +I M+PG+ K+
Sbjct: 300 VSFVEKAQESLDMEATLQMQKKLMKNEFDLNDFFDQLQQLKKMGSMQSLIEMVPGLNKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
P Q E K +EA+I +MT EE+ +PE++ S RR+R+A SG Q V+ L+ Q
Sbjct: 360 PKQDLE-NLDFKPIEAIISSMTKEEKSRPEIINGS--RRQRIALGSGTRVQDVNMLLKQF 416
Query: 503 FQMRVRMKNL 512
+M+ M+++
Sbjct: 417 GEMKKMMRSV 426
>gi|418655398|ref|ZP_13217261.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|375037268|gb|EHS30313.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-105]
Length = 455
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE S + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENSSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNIS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|325860535|ref|ZP_08173639.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
gi|325481920|gb|EGC84949.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
Length = 456
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/432 (49%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKI+ DEL +LMGGE L +RPT+IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIMHDELAELMGGEAVGLNLV-NRPTIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI+QL ++GEQVGVPVY+ ++IA + EAK
Sbjct: 120 ANMLKTKEHKHPLLVACDVYRPAAIEQLKVVGEQVGVPVYSEPDNKTVNEIADHAIAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E++ +K+ + P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIIDTAGRLAVDEDMMNEIESLKKHVTPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|262409622|ref|ZP_06086162.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|294643466|ref|ZP_06721279.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294807908|ref|ZP_06766689.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|298484340|ref|ZP_07002501.1| signal recognition particle protein [Bacteroides sp. D22]
gi|336405957|ref|ZP_08586623.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|345509533|ref|ZP_08789129.1| signal recognition particle protein [Bacteroides sp. D1]
gi|383113535|ref|ZP_09934307.1| signal recognition particle protein [Bacteroides sp. D2]
gi|423216105|ref|ZP_17202631.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
gi|229447054|gb|EEO52845.1| signal recognition particle protein [Bacteroides sp. D1]
gi|262352475|gb|EEZ01575.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|292641185|gb|EFF59390.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294444906|gb|EFG13592.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|295087957|emb|CBK69480.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
xylanisolvens XB1A]
gi|298269494|gb|EFI11094.1| signal recognition particle protein [Bacteroides sp. D22]
gi|313695700|gb|EFS32535.1| signal recognition particle protein [Bacteroides sp. D2]
gi|335936211|gb|EGM98149.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|392691151|gb|EIY84401.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
Length = 440
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 292/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ +RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DARPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE++E ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|429741355|ref|ZP_19275017.1| signal recognition particle protein [Porphyromonas catoniae F0037]
gi|429159004|gb|EKY01528.1| signal recognition particle protein [Porphyromonas catoniae F0037]
Length = 447
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 301/445 (67%), Gaps = 6/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALLEADV+ V ++F + V E+A+
Sbjct: 1 MFENLSERLERSFKILKGEGKITELNVAETLKDVRRALLEADVNYNVAKKFTEEVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ VRP + +VKIV DEL +LMG + +E+ K P +IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVRPGELMVKIVHDELAQLMGSKATEINL-KGTPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A+ LK KQ K +LVA DVYRPAAI+QL +L EQ+ VPVY P IA++G+ EA
Sbjct: 120 AHLLKTKQSKKPLLVACDVYRPAAIEQLRVLAEQIAVPVYFDLESKDPVSIARRGVAEAM 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVI+DTAGRL ID+ MM E++ VK + P+E L VVD+MTGQ+A FN +
Sbjct: 180 TQGCDVVIIDTAGRLAIDEEMMHEIQAVKEAIRPSETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+M+ L+ F+P+RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVDKPIKFVGMGEKMDALDVFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ++ +++A ++++I FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQQLYDEQEARRLEERIAKDQFDFNDFLTQIHQIKKMGNIKDLAAMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER KP +L RRKR+A SG T Q V++L+ Q
Sbjct: 360 -KDIDINDDAFKSIEAIIYSMTPEERAKPHILDGH--RRKRIALGSGTTVQDVNKLLTQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q R MK L G +GG +P + ++
Sbjct: 417 TQTRKMMKTLQG-FKGGKMPKIPSM 440
>gi|322391775|ref|ZP_08065240.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
gi|321145255|gb|EFX40651.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
Length = 521
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FENLTERLQNVFKNLRKKGKITESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVNEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEDARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKAFEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALQNMKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|255100269|ref|ZP_05329246.1| signal recognition particle protein [Clostridium difficile
QCD-63q42]
gi|255306209|ref|ZP_05350381.1| signal recognition particle protein [Clostridium difficile ATCC
43255]
gi|423082359|ref|ZP_17070951.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
gi|423087751|ref|ZP_17076137.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357544065|gb|EHJ26071.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357548685|gb|EHJ30545.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
Length = 450
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 299/433 (69%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT+ ++ MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PT++++ GLQG GKTT + KL
Sbjct: 62 GQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA D+YRPAAI QL ++GE++ +PV+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +MDELK +K + P E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 NANDLVIIDTAGRLHIDEVLMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++KI DF DFL+Q + MG + +++GMIPGMG +
Sbjct: 302 SLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKD 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K +K +A+I++MT ER P +L S R+KR+A+ SG + Q V++L+ Q
Sbjct: 362 QLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMG 514
L +M+ MK G
Sbjct: 420 LNEMKKMMKMFAG 432
>gi|423090839|ref|ZP_17079125.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
gi|357555954|gb|EHJ37576.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
Length = 450
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 299/433 (69%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT+ ++ MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PT++++ GLQG GKTT + KL
Sbjct: 62 GQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA D+YRPAAI QL ++GE++ +PV+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPINIAKAGLSHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +MDELK +K + P E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 NANDLVIIDTAGRLHIDEVLMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++KI DF DFL+Q + MG + +++GMIPGMG +
Sbjct: 302 SLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKD 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K +K +A+I++MT ER P +L S R+KR+A+ SG + Q V++L+ Q
Sbjct: 362 QLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMG 514
L +M+ MK G
Sbjct: 420 LNEMKKMMKMFAG 432
>gi|419784925|ref|ZP_14310683.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
gi|383363526|gb|EID40858.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
Length = 447
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/442 (46%), Positives = 314/442 (71%), Gaps = 4/442 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R AL EADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALFEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
M+ MK G +G + A+
Sbjct: 421 NDMKKMMKQFTGGGKGKKVNAI 442
>gi|296451248|ref|ZP_06892988.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296880400|ref|ZP_06904363.1| signal recognition particle protein [Clostridium difficile NAP07]
gi|296259854|gb|EFH06709.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296428641|gb|EFH14525.1| signal recognition particle protein [Clostridium difficile NAP07]
Length = 450
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 299/433 (69%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT+ ++ MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEADVKNAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PT++++ GLQG GKTT + KL
Sbjct: 62 GQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA D+YRPAAI QL ++GE++ +PV+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +MDELK +K + P E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 NANDLVIIDTAGRLHIDEVLMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++KI DF DFL+Q + MG + +++GMIPGMG +
Sbjct: 302 SLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKD 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K +K +A+I++MT ER P +L S R+KR+A+ SG + Q V++L+ Q
Sbjct: 362 QLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNAS--RKKRIARGSGTSVQDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMG 514
L +M+ MK G
Sbjct: 420 LNEMKKMMKMFAG 432
>gi|430750342|ref|YP_007213250.1| signal recognition particle protein [Thermobacillus composti KWC4]
gi|430734307|gb|AGA58252.1| signal recognition particle protein [Thermobacillus composti KWC4]
Length = 464
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/429 (49%), Positives = 301/429 (70%), Gaps = 3/429 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L++ + KL+G+ +T++++ E MR++R ALLEADV+ VV+ F+ V E+A+G
Sbjct: 4 FESLTSRLQSVFGKLRGKGKVTEDDVNEAMREVRLALLEADVNFKVVKDFIARVKERAIG 63
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P ++ IV EL +LMGG ++L A PTVI++AGLQG GKTT SAKLA
Sbjct: 64 QEVVKSFTPGMVIIDIVNKELTELMGGTQAKLAKAAKPPTVIMMAGLQGAGKTTASAKLA 123
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K G +L A D+YRPAAI QL +LG Q+GVPV++ G +V P IA+Q L+ AK +
Sbjct: 124 LMLQKGGHKPLLAACDIYRPAAIKQLQVLGGQIGVPVFSLGDKVNPVDIARQALQHAKDE 183
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D +I+DTAGRL ID+A+M+EL+ + + P EVLLVVDAM GQEA + +F+ ++ +
Sbjct: 184 GRDYLIIDTAGRLHIDEALMEELRQIHEGVKPDEVLLVVDAMIGQEAVNVAQSFHEQLEL 243
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAA+SVK V+G PIK VG GE++E LEPF+PDRMA RILGMGD+LS
Sbjct: 244 TGIVLTKLDGDTRGGAAISVKAVTGCPIKFVGMGEKIEPLEPFHPDRMASRILGMGDMLS 303
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + E A EM++K+ +A F F DFL+Q V ++G + +++ M+PGMGK+
Sbjct: 304 LIEKAQAAIDAEKAAEMERKMRAAEFTFEDFLEQMAQVRKLGPLDQLLEMLPGMGKLKQL 363
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ E+ L +EA++++MT EE+ PE+L S RRKR+A SG T V++L+ Q
Sbjct: 364 KDIQIDERQLARVEAIVKSMTTEEKRNPEILNHS--RRKRIAAGSGTTVADVNRLIKQFD 421
Query: 504 QMRVRMKNL 512
MR MK
Sbjct: 422 DMRRMMKQF 430
>gi|259046590|ref|ZP_05736991.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
gi|259036755|gb|EEW38010.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
Length = 478
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/442 (47%), Positives = 307/442 (69%), Gaps = 8/442 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A + + +T+ ++ + MR++R ALLEADV+ VV+ FV+ V+E+A+G
Sbjct: 3 FEGLSDRLQNAMTSVSRKGKITEADLKQMMREVRLALLEADVNFKVVKDFVRKVNERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +LMGGE + F PTV+++ GLQG GKTT + KLA
Sbjct: 63 ANVLEALSPAQQVVKIVNEELTELMGGEQAPFRFEAKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+++ K + K +LVA DVYRPAAIDQL LG+Q+ PV++ G +V P +IAKQ +E+AK
Sbjct: 123 SFMAKHEKKRPLLVAADVYRPAAIDQLQTLGKQLNFPVFSLGNQVSPVEIAKQAIEKAKI 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +M+EL+++K V NP+E+LLVVD+MTGQ+A + TFN +
Sbjct: 183 DGRDLVIIDTAGRLHIDETLMEELQNIKAVANPSEILLVVDSMTGQDAVNVAQTFNERLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK GRGE++ED E FYP+RMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRSVTGKPIKFTGRGEKLEDFEIFYPERMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ + A+EM KI + FDFNDF+ Q V +MG + ++ MIPG+ K+
Sbjct: 303 TLIEKAQQDFDEAKAQEMADKIKANTFDFNDFIDQLDQVNKMGPLEDILKMIPGLNKMAG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ K M+A++ +MTP+ERE P++L+++ RRKR+A S + +V++L+ Q
Sbjct: 363 LNDLKVDPKDTARMKAIVLSMTPQERENPDILSQA--RRKRIAAGSARPLAEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
+ K +M M G++ L
Sbjct: 421 NE----SKKMMNQMSNGNMKGL 438
>gi|253573492|ref|ZP_04850835.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251847020|gb|EES75025.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 458
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/433 (48%), Positives = 302/433 (69%), Gaps = 3/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS L++ ++KL+G+ ++++++ E MR++R ALLEADV+ VV+ F+ V E+AVG
Sbjct: 3 FEGLTSRLQSVFSKLRGKGKVSEDDVNEAMREVRLALLEADVNFKVVKEFIAKVKEKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L + PTV+++AGLQG GKTT SAKLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLARSNRPPTVVMMAGLQGAGKTTTSAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L K+ +LVAGD+YRPAAI QL +LGEQ+ VPV+T P +IA+Q L+ AK
Sbjct: 123 KLLLKENHRPLLVAGDIYRPAAIKQLQVLGEQIKVPVFTLPEGNSPVEIARQALQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D V++DTAGRL +D+ +M+EL+ + V NP EVLLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 GNDYVLIDTAGRLHVDEELMEELRQIHEVTNPDEVLLVVDAMTGQDAVNVAESFNQQLTL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + E A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMGK+
Sbjct: 303 LIEKAQANIDAEKAKEMERKMRNAEFTFEDFLEQMEQVKKLGPLDQLMDMIPGMGKMKQM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
Q V+ EK + +EA++ +MT EE++ P+++ S RRKR+A SG T V++L+ Q
Sbjct: 363 QNVKVDEKQMSRVEAIVHSMTKEEKQNPDMINHS--RRKRIAAGSGTTLADVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM 516
+MR MK +M
Sbjct: 421 EMRRVMKQFSDMM 433
>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
Length = 448
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/434 (47%), Positives = 305/434 (70%), Gaps = 6/434 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L AA KL+G++T++++++ E +R++R ALLEADV+ VV+ F + E+A+G
Sbjct: 3 FEILTDKLTAAIQKLRGQKTVSEQDLKETLREVRLALLEADVNFKVVKEFTAKIRERAMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ + P Q +VKIV +EL++L+GG S+L A + PTVI+L GLQG GKTT KLA
Sbjct: 63 QQVDPNLTPGQYIVKIVHEELIELLGGTQSKLNVAANPPTVIMLVGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYL+K GK ++VAGDVYRPAAI QL ++G+Q+ +PV++ G +V P +IA++ L+ A
Sbjct: 123 NYLRKNGKKPLMVAGDVYRPAAITQLEVIGKQLDMPVFSMGDQVSPVEIARESLKRANAL 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D V++DTAGRL +D+ +M+ELKD+K +NP E+LLVVDAMTGQ+A + +FN +GI
Sbjct: 183 LCDTVLIDTAGRLHVDETLMNELKDMKTAVNPDEILLVVDAMTGQDAVTVADSFNKALGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG I+TKLDGD+RGGA LSVK V+ P+K VG GE+++ L+PFYPDRMA RILGMGDVLS
Sbjct: 243 TGLIVTKLDGDARGGAVLSVKAVTNCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQE + + A++M + + F + FL Q + V ++GS+ ++ MIPGMGK
Sbjct: 303 LIEKAQEAIDVDSAKKMAESLKKNEFTLDMFLDQMKQVKKLGSLESILSMIPGMGKFA-K 361
Query: 445 QVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
Q+ + K ++ +EA+I +MTP+ER+ P ++ S RRKR+A G+ Q V++L+ Q
Sbjct: 362 QLEGVDLDGKEVRRLEAIIYSMTPQERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQ 419
Query: 502 LFQMRVRMKNLMGV 515
+ + MK + G+
Sbjct: 420 FEESKKLMKTMQGM 433
>gi|418645795|ref|ZP_13207913.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|375022328|gb|EHS15811.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
Length = 447
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/442 (46%), Positives = 315/442 (71%), Gaps = 4/442 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
M+ MK G +G + A+
Sbjct: 421 NDMKKMMKQFTGGGKGKKVNAI 442
>gi|325297211|ref|YP_004257128.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
gi|324316764|gb|ADY34655.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
Length = 441
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/428 (50%), Positives = 291/428 (67%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKNFTDTVKEKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL KLMGG+ EL K RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELAKLMGGDTIELDL-KGRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A K K+ + +LVA DVYRPAAI+QL +LG QV VPVY+ P QIAK ++EAK
Sbjct: 120 ARMFKTKKNRKPLLVACDVYRPAAIEQLKVLGTQVEVPVYSEPESKDPVQIAKNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E++ +K + P L VVDAMTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIETIKNAITPDATLFVVDAMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS++ V KPI VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIRTVVNKPILFVGTGEKLDAVDLFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIQKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER +PE+L S RR R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERTRPEILNGS--RRNRIAKGSGTSIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|421872835|ref|ZP_16304452.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
gi|372458250|emb|CCF14001.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
Length = 480
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/452 (46%), Positives = 307/452 (67%), Gaps = 12/452 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A++KL+G + + + E MR++R ALLEADV+ VV++FV V E+AVG
Sbjct: 3 FESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q ++K+V +EL +LMGG VS+L + PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ + MLVA D+YRPAAI QL +LGEQ+ PV+ G +V P +IA + +E AK+
Sbjct: 123 KLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAKEN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+ D VI+DTAGRL ID+ +M+EL+ V+ V P E+LLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HYDYVILDTAGRLHIDETLMEELQQVREVAKPDEILLVVDAMTGQDAVNVAESFNNQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALSVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS
Sbjct: 243 TGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQE + + A+EM++++ F F+ FL + + ++G + ++GM+PGM K+
Sbjct: 303 LIEKAQESVDVDKAKEMERQMRQGEFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKMKGM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK + EA++++MT EER P+++ + RRKR+A SG T Q+V++ + Q
Sbjct: 363 KDLKVDEKQIARTEAIVKSMTKEERANPDIMNAN--RRKRIAAGSGTTIQEVNRFIKQFE 420
Query: 504 QMRVRMKNLMGVME---------GGSLPALSN 526
M+ MK G+ + GG P N
Sbjct: 421 DMKKMMKQFTGMTDKMKKKSKKKGGFFPFKGN 452
>gi|365904203|ref|ZP_09441962.1| signal recognition particle protein [Lactobacillus versmoldensis
KCTC 3814]
Length = 479
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 306/438 (69%), Gaps = 7/438 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L ++ L+G+ L++++I MR++R ALLEADV+ VV+ F++ V E+A+G
Sbjct: 3 FEGLSERLNKVFSSLRGKGKLSEDDIRTVMREVRMALLEADVNFDVVKSFIKQVRERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV DEL KLMG E L A PT+I++ GLQG GKTT + KLA
Sbjct: 63 AEVMESLTPSQQVVKIVDDELTKLMGTEAVPLNKAPHIPTIIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L + K+ + +AGDVYRPAAI+QL +GEQ+ VPVY GT+ P +I K GL +A +
Sbjct: 123 KHLMENDKARPLFIAGDVYRPAAIEQLKTIGEQLDVPVYDEGTDQDPVEIVKSGLAQAHE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRL+ID+ +MDELK +K + P E+L V D+MTGQ AA + F+ ++
Sbjct: 183 KKNDYVIIDTAGRLEIDEKLMDELKRIKELAQPNEILFVADSMTGQVAAKVAAGFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+++ L+ F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIGQGEKLDQLDVFHPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ A++M +KI +FDFNDF+ Q + +MG + ++ MIPGM P
Sbjct: 303 TLIEKAQQDYDQKQAQDMAQKIKENSFDFNDFIDQMDQIQKMGPLDEIMKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V EK + ++A++ +MTP+ERE P+LL +P RR+R+A SG++ Q+V++++ Q
Sbjct: 362 ALANVNIDEKDISHLKAIVYSMTPQEREDPKLL--NPSRRRRIASGSGRSVQEVNRMIKQ 419
Query: 502 LFQMRVRMKNL-MGVMEG 518
Q + MK + G M+G
Sbjct: 420 FKQSQDMMKQMSKGNMKG 437
>gi|423720622|ref|ZP_17694804.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|383365975|gb|EID43266.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 446
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 309/420 (73%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++ +K++G+ +T+ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLSERLQSVMSKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVLKSLTPGQQVIKVVKEELTELMGGEQSKIAVASRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+K+ ++ MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKRYNRNPMLVAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDETLMDELKQMKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A F +DFL+Q V ++G + ++ MIPG KI
Sbjct: 303 TLIEKAQAAVDEEKAKELEQKMRTATFTLDDFLEQLGQVRKLGPLDEILKMIPGFHKIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I +MT EE+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 363 LNNLQIEEKQISRVEAIIRSMTKEEKMHPEIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|421277208|ref|ZP_15728028.1| signal recognition particle protein [Streptococcus mitis SPAR10]
gi|395876489|gb|EJG87565.1| signal recognition particle protein [Streptococcus mitis SPAR10]
Length = 521
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FENLTERLQNVFKNLRKKGKITESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVNEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEDARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNDQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALQNMKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|404370917|ref|ZP_10976232.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
gi|226912962|gb|EEH98163.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
Length = 450
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/433 (47%), Positives = 308/433 (71%), Gaps = 9/433 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A+ KLKG+ LT+++I E MR+++ ALLEADV+ VV++F+ +VSE+ VG
Sbjct: 3 FEGLSDKLQEAFKKLKGKGKLTEKDIKEAMREVKLALLEADVNFKVVKKFISSVSEKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMGG S+L F PTVI++ GLQG GKTT+S KLA
Sbjct: 63 NEVLESLTPAQQVIKIVNEELTNLMGGSESKLNFNSVGPTVIMMVGLQGAGKTTMSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ K +LVA D+YRPAAI QL ++G+Q+ +PV+ G +V P IAK G+ A++
Sbjct: 123 LQLRKQNKKPLLVACDIYRPAAIKQLEVVGKQIDIPVFQMGDKVNPVDIAKAGIAHAREN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+V+I+DTAGRL ID+ +M+ELK +K +NP E+LLVVD+MTGQ+A + +FN + +
Sbjct: 183 GNNVIIIDTAGRLHIDENLMEELKSIKEEVNPQEILLVVDSMTGQDAVNVAESFNNSLDV 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS++ V+ KPIK +G GE+M D E FYPDRM+ RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIRSVTEKPIKFIGVGEKMSDFEVFYPDRMSSRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ+ ++A+E+ K++ +F + D+L + ++GS+S+++ M+PG+ P
Sbjct: 303 LIEKAQQAFDDKEAQELSSKMLENDFTYEDYLTAMEQMKKLGSLSKIMEMVPGI----PK 358
Query: 445 QVRE-----AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+V++ EK L ++A+I +MTP+ER P+L+A S R+KR+A+ SG + Q+V++L+
Sbjct: 359 EVKDIDFDAGEKQLGRVKAIIHSMTPKERRNPKLIAGSSSRKKRIAKGSGTSLQEVNKLI 418
Query: 500 AQLFQMRVRMKNL 512
MR +MK +
Sbjct: 419 KGFDMMRKQMKQM 431
>gi|70726678|ref|YP_253592.1| hypothetical protein SH1677 [Staphylococcus haemolyticus JCSC1435]
gi|68447402|dbj|BAE04986.1| ffh [Staphylococcus haemolyticus JCSC1435]
Length = 456
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 318/450 (70%), Gaps = 4/450 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A +++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQATIQRMRGKGKVTEADIKAMMREVRLALLEADVNFKVVKEFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE S + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENSTIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ VPVY+ G +VKP QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQLDVPVYSEGDQVKPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPNEIMLVVDAMTGQDAVNVAQSFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+M+ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKMDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A+++++K+ ++ F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEQKMRNSTFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + ++A+I++MTP ERE P +L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 MDKLNMDEKQIDHIKAIIQSMTPSERENPAVLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALK 532
M+ MK G G S +E+ LK
Sbjct: 421 NDMKKMMKQFSGAGRKGKKGKRSQMENMLK 450
>gi|384135024|ref|YP_005517738.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289109|gb|AEJ43219.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 479
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 305/435 (70%), Gaps = 10/435 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L++ L+A + +L+G LT+ ++ E MR+IRRALL ADV++ VVR FV V +AV
Sbjct: 1 MFESLSNNLQAVFQRLRGRGRLTEADVDEAMREIRRALLAADVNVKVVRDFVDRVRARAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VKIV +EL +LMGG + + A PT+++L GLQG GKTT +AKL
Sbjct: 61 GQDVLKSLTPGQQVVKIVYEELTELMGGSQARIRMASKPPTIVMLVGLQGAGKTTTAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYT---AGTEVKPSQIAKQGLEE 260
A ++Q +LVA DVYRPAA+DQL +LGEQ+ VPV++ AG +IA+ L +
Sbjct: 121 ALAFRQQSHRPLLVAADVYRPAAVDQLKVLGEQIDVPVFSFDGAGA----VEIAQAALRD 176
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
A+++ DVVIVDTAGRL ID A+M EL+ +K+VL P E+LLVVDAMTGQ+A + F+
Sbjct: 177 AERRGADVVIVDTAGRLHIDDALMGELEAMKKVLEPHEILLVVDAMTGQDAVHVAEAFHQ 236
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
+ +TG ILTKLDGD+RGGAAL+V+ +G PIK VG GE++E LEPF+P+RMA RILGMG
Sbjct: 237 RLEVTGVILTKLDGDARGGAALTVRAATGCPIKFVGMGEKIEPLEPFHPERMASRILGMG 296
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
DVLS +E+AQE + E A+EM+ ++ SANF +DF + R V +G + +++ M+PGM +
Sbjct: 297 DVLSLIERAQERIDLEKAKEMEARMRSANFTLDDFQEMFRQVRNLGPLDQILKMLPGMNR 356
Query: 441 ITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + + ++ + +EA+I +MTPEER P +L S RR+R+A SG T + V+QL+
Sbjct: 357 VKGLENLDLNDRRFRRLEAIISSMTPEERRDPGILNAS--RRRRIANGSGTTVRDVNQLI 414
Query: 500 AQLFQMRVRMKNLMG 514
Q Q+R MK+L G
Sbjct: 415 NQFEQVREMMKHLTG 429
>gi|326204801|ref|ZP_08194655.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
gi|325985013|gb|EGD45855.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
Length = 436
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/421 (48%), Positives = 297/421 (70%), Gaps = 2/421 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ K++G+ ++++++ + MR+I+ ALLEADV+ VV+ F+ VSE+AV
Sbjct: 3 VFEGLSGKLQETIKKIRGQGRVSEKDVKDMMREIKLALLEADVNFKVVKEFISKVSERAV 62
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ+VKIV +EL++L+G E S++ FA PT+ ++AGLQG GKTT + KL
Sbjct: 63 GSDVLESLTPGQQVVKIVHEELIELLGREQSKVTFASKPPTIFMMAGLQGAGKTTTAGKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQGK+ +LVA DVYRPAAI QL +LG Q+ +PV+T P QIAK+ + A+K
Sbjct: 123 ANLLRKQGKNPLLVACDVYRPAAIKQLQVLGNQLNIPVFTLEDNQNPVQIAKEAVSFAEK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D+VI+DTAGRL ID+ +MDEL ++K + P E+LLVVD+MTGQ+A + TFN ++G
Sbjct: 183 KQHDLVIIDTAGRLHIDEKLMDELLNIKNSVKPHEILLVVDSMTGQDAVNVSETFNKKLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALSVK V+GKPIK GE++ D+EPF+PDRMA RILGMGDVL
Sbjct: 243 IDGVVLTKLDGDTRGGAALSVKSVTGKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE ++ A E++KK+ + F DFL Q + + +MG + ++GM+PG+
Sbjct: 303 SLIEKAQEAYDEKKAIELEKKMRTMTFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKAL 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK + EA+I++MT +ER P ++ S RRKR++ SG T Q+V+ L+ Q
Sbjct: 363 KDIDIDEKQMGRTEAIIQSMTRKERLDPSIINGS--RRKRISAGSGTTIQEVNALLKQFE 420
Query: 504 Q 504
Q
Sbjct: 421 Q 421
>gi|312111704|ref|YP_003990020.1| signal recognition particle protein [Geobacillus sp. Y4.1MC1]
gi|336236079|ref|YP_004588695.1| signal recognition particle protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216805|gb|ADP75409.1| signal recognition particle protein [Geobacillus sp. Y4.1MC1]
gi|335362934|gb|AEH48614.1| signal recognition particle protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 446
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 309/420 (73%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++ +K++G+ +T+ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLSERLQSVMSKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVLKSLTPGQQVIKVVKEELTELMGGEQSKIAVASRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+K+ ++ MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKRYNRNPMLVAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDETLMDELKQMKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A F +DFL+Q V ++G + ++ MIPG KI
Sbjct: 303 TLIEKAQAAVDEEKAKELEQKMRTATFTLDDFLEQLGQVRKLGPLDEILKMIPGFHKIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I +MT EE+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 363 LNNLQIDEKQISRVEAIIRSMTKEEKMHPEIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|339009345|ref|ZP_08641917.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
gi|338773823|gb|EGP33354.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
Length = 480
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/452 (46%), Positives = 307/452 (67%), Gaps = 12/452 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ A++KL+G + + + E MR++R ALLEADV+ VV++FV + E+AVG
Sbjct: 3 FESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARIKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q ++K+V +EL +LMGG VS+L + PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ + MLVA D+YRPAAI QL +LGEQ+ PV+ G +V P +IA + +E AK+
Sbjct: 123 KLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAKEN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+ D VI+DTAGRL ID+ +M+EL+ V+ V P E+LLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 HYDYVILDTAGRLHIDETLMEELQQVREVAKPDEILLVVDAMTGQDAVNVAESFNNQLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALSVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS
Sbjct: 243 TGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQE + + A+EM++++ F F+ FL + + ++G + ++GM+PGM K+
Sbjct: 303 LIEKAQESVDVDKAKEMERQMRQGEFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKMKGM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK + EA++++MT EER P+++ + RRKR+A SG T Q+V++ + Q
Sbjct: 363 KDLKVDEKQIARTEAIVKSMTKEERANPDIMNAN--RRKRIAAGSGTTIQEVNRFIKQFE 420
Query: 504 QMRVRMKNLMGVME---------GGSLPALSN 526
M+ MK G+ + GG P N
Sbjct: 421 DMKKMMKQFTGMTDKMKKKSKKKGGFFPFKGN 452
>gi|312869933|ref|ZP_07730072.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
gi|311094518|gb|EFQ52823.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
Length = 480
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 304/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+AVG
Sbjct: 3 FEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFTVVKDFVKTVREKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAAHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + +Q+ VPV+ GT+V P +I ++G+E AK+
Sbjct: 123 LRLKNEDHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELVNPDEILLVIDSMTGQNAVNTAQGFDDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAA+S++ V+GKPIK VG GE+M DL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMADLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ FD+NDFL Q V +MG + ++ M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A++ +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNINIDPKQFAHIKAIVLSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR MK + G++ + NL
Sbjct: 420 FNQMRKMMKQV----TNGNMSGMQNL 441
>gi|237723193|ref|ZP_04553674.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293372708|ref|ZP_06619090.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
gi|229447715|gb|EEO53506.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292632517|gb|EFF51113.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
Length = 440
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 293/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKIFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ +RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DARPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYCELDSKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE++E ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|387780346|ref|YP_005755144.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177448|emb|CCC87916.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus LGA251]
Length = 455
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSIQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|304383803|ref|ZP_07366261.1| signal recognition particle protein [Prevotella marshii DSM 16973]
gi|304335059|gb|EFM01331.1| signal recognition particle protein [Prevotella marshii DSM 16973]
Length = 452
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/458 (46%), Positives = 308/458 (67%), Gaps = 9/458 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLEHSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGG+ +E V K+RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGQATE-VNLKNRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ + +LVA DVYRPAAI+QL ++G Q+GV VY+ +IA+ ++ AK
Sbjct: 120 ANLLKTKQHRHPLLVACDVYRPAAIEQLRVVGTQIGVEVYSEPDSKDVVEIAQHAIQHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K+ D V++DTAGRL +D+ MM E+ +K+ + P E L VVDAMTGQ+A FN +
Sbjct: 180 AKSYDTVVIDTAGRLAVDEEMMSEIATLKKAVTPDETLFVVDAMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+PDRMA RILGMGD+
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPDRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +Q+KI FDF DFL Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQRKIQKNKFDFEDFLNQIQQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PE+L S R++R+A+ SG Q++++L+ Q
Sbjct: 360 K-DIDIDDNAFKGIEAIIRSMTPKERTHPEILNTS--RKQRIAKGSGTDIQEINKLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 540
QMR MK +M GG+ + + A+K+ + PG
Sbjct: 417 EQMRKMMK----MMSGGAGSNMMRMAGAMKNMRGRMPG 450
>gi|49483400|ref|YP_040624.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|258423922|ref|ZP_05686807.1| signal recognition particle protein [Staphylococcus aureus A9635]
gi|282903791|ref|ZP_06311679.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C160]
gi|282905555|ref|ZP_06313410.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908530|ref|ZP_06316360.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910809|ref|ZP_06318612.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282916487|ref|ZP_06324249.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus D139]
gi|282918935|ref|ZP_06326670.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C427]
gi|283770299|ref|ZP_06343191.1| signal recognition particle subunit SRP54 [Staphylococcus aureus
subsp. aureus H19]
gi|283957979|ref|ZP_06375430.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295427723|ref|ZP_06820355.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297591318|ref|ZP_06949956.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MN8]
gi|379020946|ref|YP_005297608.1| Signal recognition particle subunit Ffh SRP54 [Staphylococcus
aureus subsp. aureus M013]
gi|384547481|ref|YP_005736734.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED133]
gi|384549992|ref|YP_005739244.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384867880|ref|YP_005748076.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|387602512|ref|YP_005734033.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ST398]
gi|404478577|ref|YP_006710007.1| signal recognition particle protein [Staphylococcus aureus
08BA02176]
gi|415683827|ref|ZP_11449029.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|416839281|ref|ZP_11902675.1| signal recognition particle protein [Staphylococcus aureus O11]
gi|416847445|ref|ZP_11907167.1| signal recognition particle protein [Staphylococcus aureus O46]
gi|417891836|ref|ZP_12535893.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21200]
gi|417896155|ref|ZP_12540122.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21235]
gi|417901448|ref|ZP_12545324.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21266]
gi|418283091|ref|ZP_12895848.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21202]
gi|418308706|ref|ZP_12920312.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21194]
gi|418309899|ref|ZP_12921450.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21331]
gi|418559164|ref|ZP_13123710.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21252]
gi|418561380|ref|ZP_13125871.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21262]
gi|418566688|ref|ZP_13131061.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21264]
gi|418582071|ref|ZP_13146149.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597679|ref|ZP_13161201.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21342]
gi|418599631|ref|ZP_13163111.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21343]
gi|418603153|ref|ZP_13166544.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21345]
gi|418889028|ref|ZP_13443164.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418891870|ref|ZP_13445985.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418897774|ref|ZP_13451844.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900644|ref|ZP_13454701.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418908948|ref|ZP_13462951.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917032|ref|ZP_13470991.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418922819|ref|ZP_13476736.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418950562|ref|ZP_13502726.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|418982150|ref|ZP_13529858.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418985818|ref|ZP_13533504.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418993856|ref|ZP_13541492.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG290]
gi|49241529|emb|CAG40215.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257845951|gb|EEV69980.1| signal recognition particle protein [Staphylococcus aureus A9635]
gi|282316745|gb|EFB47119.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C427]
gi|282319927|gb|EFB50275.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus D139]
gi|282325414|gb|EFB55723.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327592|gb|EFB57875.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282330847|gb|EFB60361.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595409|gb|EFC00373.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C160]
gi|283460446|gb|EFC07536.1| signal recognition particle subunit SRP54 [Staphylococcus aureus
subsp. aureus H19]
gi|283470450|emb|CAQ49661.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ST398]
gi|283790128|gb|EFC28945.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295128081|gb|EFG57715.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576204|gb|EFH94920.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MN8]
gi|298694530|gb|ADI97752.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED133]
gi|302332841|gb|ADL23034.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|312438385|gb|ADQ77456.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|315194125|gb|EFU24518.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|323441012|gb|EGA98719.1| signal recognition particle protein [Staphylococcus aureus O11]
gi|323442329|gb|EGA99959.1| signal recognition particle protein [Staphylococcus aureus O46]
gi|341841056|gb|EGS82528.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21235]
gi|341845287|gb|EGS86489.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21266]
gi|341851122|gb|EGS92051.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21200]
gi|359830255|gb|AEV78233.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus subsp. aureus M013]
gi|365168688|gb|EHM60026.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21202]
gi|365237732|gb|EHM78575.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21194]
gi|365238022|gb|EHM78861.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21331]
gi|371969958|gb|EHO87396.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21264]
gi|371975455|gb|EHO92749.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21252]
gi|371977591|gb|EHO94855.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21262]
gi|374393741|gb|EHQ65045.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21342]
gi|374393882|gb|EHQ65185.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21345]
gi|374396289|gb|EHQ67530.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21343]
gi|375376734|gb|EHS80253.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|377703112|gb|EHT27428.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704431|gb|EHT28740.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705636|gb|EHT29940.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710481|gb|EHT34719.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377731202|gb|EHT55259.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377736142|gb|EHT60172.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377745906|gb|EHT69881.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG290]
gi|377750206|gb|EHT74144.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377753986|gb|EHT77896.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG149]
gi|377754538|gb|EHT78447.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377760809|gb|EHT84685.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|404440066|gb|AFR73259.1| signal recognition particle protein [Staphylococcus aureus
08BA02176]
Length = 455
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|258511333|ref|YP_003184767.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478059|gb|ACV58378.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 479
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 304/435 (69%), Gaps = 10/435 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L++ L+A + +L+G LT+ ++ E MR+IRRALL ADV++ VVR FV V +AV
Sbjct: 1 MFESLSNNLQAVFQRLRGRGRLTEADVDEAMREIRRALLAADVNVKVVRDFVDRVRARAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VKIV +EL +LMGG + + A PTV++L GLQG GKTT +AKL
Sbjct: 61 GQDVLKSLTPGQQVVKIVYEELTELMGGSQARIRMAPKPPTVVMLVGLQGAGKTTTAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYT---AGTEVKPSQIAKQGLEE 260
A +Q +LVA DVYRPAA+DQL +LG Q+ VPV++ AG +IA+ GL +
Sbjct: 121 ALAFHQQNHRPLLVAADVYRPAAVDQLKVLGAQIDVPVFSLDGAGA----VEIAEAGLRD 176
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
A+++ DVVIVDTAGRL ID A+M EL+ +K++L P E+LLVVDAMTGQ+A + F+
Sbjct: 177 AERRGADVVIVDTAGRLHIDDALMAELESMKKILEPHEILLVVDAMTGQDAVHVAEAFHQ 236
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
+ +TG ILTKLDGD+RGGAAL+V+ +G PIK VG GE++E LEPF+P+RMA RILGMG
Sbjct: 237 RLEVTGVILTKLDGDARGGAALTVRAATGCPIKFVGMGEKIEPLEPFHPERMASRILGMG 296
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
DVLS +E+AQE + E A+EM+ ++ SANF +DF + R V +G + +++ M+PGM +
Sbjct: 297 DVLSLIERAQERIDLEKAKEMEARMRSANFTLDDFQEMFRQVRNLGPLDQILKMLPGMNR 356
Query: 441 ITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + + ++ + +EA+I +MTPEER P +L S RR+R+A SG T + V+QL+
Sbjct: 357 VKGLENLDLNDRRFRRLEAIISSMTPEERRDPSILNAS--RRRRIANGSGTTVRDVNQLI 414
Query: 500 AQLFQMRVRMKNLMG 514
Q Q+R MK+L G
Sbjct: 415 NQFEQVREMMKHLTG 429
>gi|404485667|ref|ZP_11020864.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
gi|404338355|gb|EJZ64802.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
Length = 440
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 297/428 (69%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V ++F V +A+
Sbjct: 1 MFENLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKQFTDTVKTKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGGE +E+ +++ P++IL++GLQG GKTT S KL
Sbjct: 61 GQDVLTAVKPGQLMVKIVHDELATLMGGETAEVNLSQN-PSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+GK +LVA DVYRPAAI+QL +LGEQ+ VPVYT P I+ ++ AK
Sbjct: 120 AKMLKSKKGKRPLLVACDVYRPAAIEQLKVLGEQIDVPVYTEEDSKDPVSISANAVKYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ + D+VIVDTAGRL ID+ MM+E++ +K+ +NPTE L VVD+MTGQ+A FN +
Sbjct: 180 ENHFDLVIVDTAGRLAIDEQMMNEIEAIKKKINPTETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE++E ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVDKPIKFVGTGEKLEAIDYFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIHQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PELL S RR+R+A SG + Q+V++L+ Q
Sbjct: 360 K-DMDIDDNAFKSIEAIIYSMTPKERSNPELLNGS--RRQRIAAGSGTSIQEVNRLIKQF 416
Query: 503 FQMRVRMK 510
Q R M+
Sbjct: 417 DQTRKMMR 424
>gi|374298883|ref|YP_005050522.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551819|gb|EGJ48863.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 508
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/434 (48%), Positives = 304/434 (70%), Gaps = 5/434 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE+ + + KG+ LT+ENI E +R++R ALLEADV+ VV++FV V E+A+
Sbjct: 1 MFESLSDRLESVFKRFKGQGRLTEENIQEGLREVRLALLEADVNFKVVKQFVDRVREKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + P QQ+VK+V DELV+L+GG+ S S+P +++ GLQG GKTT + KL
Sbjct: 61 GQDVQGSLTPGQQVVKVVHDELVELLGGKTSAFDVKGSKPLTVMMVGLQGSGKTTSAGKL 120
Query: 204 ANYLKKQGK-SCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A YL+++ K LV DVYRPAAIDQL LG Q+ VPVY + T++ P I + L+ AK
Sbjct: 121 ALYLRREHKMKPFLVPADVYRPAAIDQLTKLGAQIDVPVYPSSTDMNPVDICRDALQVAK 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+V+ DTAGRL ID+ +M+EL ++K ++P E+L V DAMTGQ+A + +F+ ++
Sbjct: 181 DKGYDLVLFDTAGRLHIDERLMEELANIKAAVSPREILFVADAMTGQDAVNVAQSFDAKL 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
I+G +LTK+DGD+RGGAALS+K V+GK +K VG GE++ ++E F+PDR+A RILGMGDV
Sbjct: 241 EISGVVLTKMDGDARGGAALSIKSVTGKSVKFVGMGEKLSEMEVFHPDRIASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
L+ +EKAQ +++A+E+ KK A+FDF DF Q R + ++GS+ ++ +IPGMGK+T
Sbjct: 301 LTLIEKAQGEFSEDEAQELGKKFQKASFDFEDFRTQMRRLKKLGSLEGLLKLIPGMGKLT 360
Query: 443 P--AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
++ EK +K +EA+I +MT EER KPE+L S RR+R+A SG + +QV+QLV
Sbjct: 361 KQLGEMSVHEKEMKRVEAIISSMTMEERRKPEVLNVS--RRRRIAAGSGTSLEQVNQLVK 418
Query: 501 QLFQMRVRMKNLMG 514
QMR M+ +MG
Sbjct: 419 NFDQMRKMMQQVMG 432
>gi|82750841|ref|YP_416582.1| signal recognition particle protein [Staphylococcus aureus RF122]
gi|82656372|emb|CAI80790.1| signal recognition particle protein [Staphylococcus aureus RF122]
Length = 455
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIILVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|126654295|ref|ZP_01726072.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
gi|126589259|gb|EAZ83420.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
Length = 438
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/436 (49%), Positives = 315/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K+KG+ ++++++ E MR++R AL+EADV+L VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQGTIQKIKGKGKVSEQDVKEMMREVRFALIEADVNLKVVKEFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V +++ + P QQ++KIV+DEL +LMGGE S + F PTVI++ GLQG GKTT S KLA
Sbjct: 63 VDVMQSLTPGQQVIKIVQDELTELMGGEQSPIKFNTKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA DVYRPAA+ QL LG+Q+ +PV++ GT++ P +IA+Q +E+AK+
Sbjct: 123 NVLRKKYNRKPLLVAADVYRPAAVQQLETLGKQLSLPVFSLGTDISPVEIARQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ DVVI+DTAGRL ID+ +M ELKD++ + P EV LVVDAMTGQ+A + +FN IG
Sbjct: 183 EHHDVVIIDTAGRLHIDEDLMQELKDIRALKEPDEVFLVVDAMTGQDAVNVAESFNEAIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + + A+E+++K + F +DF++Q + V +MG + ++ M+PG KI
Sbjct: 303 SLIEKAQANVDEAKAKELEEKFKTQTFTLDDFVEQLQQVKKMGPIDEILKMLPGANKIKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V+ +K + +EA+I +MTP E+ PEL+ S R+KR+++ SG + Q+V++L+ Q
Sbjct: 363 LDNVKVDDKQMGRVEAIIYSMTPAEKTNPELINGS--RKKRISKGSGTSIQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + G+ G
Sbjct: 421 DEMKKMMKQMTGMASG 436
>gi|386728920|ref|YP_006195303.1| Signal recognition particle, subunit FFH/SRP54 [Staphylococcus
aureus subsp. aureus 71193]
gi|418980058|ref|ZP_13527846.1| Signal recognition particle, subunit FFH/Srp54 [Staphylococcus
aureus subsp. aureus DR10]
gi|379992221|gb|EIA13678.1| Signal recognition particle, subunit FFH/Srp54 [Staphylococcus
aureus subsp. aureus DR10]
gi|384230213|gb|AFH69460.1| Signal recognition particle, subunit FFH/SRP54 [Staphylococcus
aureus subsp. aureus 71193]
Length = 461
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 9 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 68
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 69 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 128
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 129 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 188
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 189 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 248
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 249 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 308
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 309 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 368
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 369 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 426
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 427 NDMKKMMKQF 436
>gi|329962381|ref|ZP_08300385.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
gi|328530104|gb|EGF56989.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
Length = 440
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 298/442 (67%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V +A+
Sbjct: 1 MFDNLSERLERSFKILKGEGRITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKTKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE +E+ S+P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETAEINI-DSKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P +IA+ + EAK
Sbjct: 120 ARMLKSKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSEPDSKDPVRIAQNAILEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEEMMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDIDIDDNAFKSIEAIIYSMTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G G +P L
Sbjct: 417 DQTRKMMKMVTGSKMGKMMPKL 438
>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
Length = 448
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/433 (47%), Positives = 301/433 (69%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L AA K++G++T+T++++ E +RD+R ALLEADV+ VV+ F + E+ G
Sbjct: 3 FEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERVQG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ + Q +VK+V +EL+ L+GGE S+L F+ + PTVI+LAGLQG GKTT KLA
Sbjct: 63 QKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYL+K GK ++VAGDVYRPAAI QL ++G+++ +PV++ G+EV P IA++ ++ A
Sbjct: 123 NYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRANAL 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D V++DTAGRL ID+ +MDELK++K ++P E+LLVVDAMTGQ+A + FN +GI
Sbjct: 183 LCDTVLIDTAGRLHIDEKLMDELKNIKSAVHPDEILLVVDAMTGQDAVTVAEAFNKALGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG I+TKLDGD+RGGA LSVK V+ P+K VG GE+++ L+PFYPDRMA RILGMGDVLS
Sbjct: 243 TGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQE + + A+ + + + F + FL Q + V R+GS+ ++ MIPGMGK +
Sbjct: 303 LIEKAQEAIDVDSAKRLAESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFSKQ 362
Query: 445 --QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V K ++ +EA+I +MTP+ER+ P ++ S RRKR+A G+ Q V++L+ Q
Sbjct: 363 FEGVDLDGKEVRRLEAIITSMTPKERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQF 420
Query: 503 FQMRVRMKNLMGV 515
+ + MK + G+
Sbjct: 421 EESKKLMKTMQGM 433
>gi|160892788|ref|ZP_02073578.1| hypothetical protein CLOL250_00319 [Clostridium sp. L2-50]
gi|156865829|gb|EDO59260.1| signal recognition particle protein [Clostridium sp. L2-50]
Length = 448
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/435 (48%), Positives = 303/435 (69%), Gaps = 4/435 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+ + LT++++ E M++++RALLEADV+ VV+ F++AVS++AVG
Sbjct: 3 FDSLSDKLQNVFKKLRSKGVLTEDDVKEAMKEVKRALLEADVNFKVVKSFIKAVSDRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSEL-VFAKSRPTVILLAGLQGVGKTTVSAKL 203
+++G+ P ++KIV++E+ KLMG +V+EL + + TVI++ GLQG GKTT +AKL
Sbjct: 63 EEVLKGLNPGHMVIKIVKEEMDKLMGSDVTELKLLPSNEITVIMMCGLQGAGKTTTAAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A K +GK +LVA DVYRPAAI QL I GE+VGVPV+T G KP IAK + A+K
Sbjct: 123 AYQFKNKGKKPLLVACDVYRPAAIKQLQINGEKVGVPVFTMGDNHKPLDIAKAAILHAEK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++++V +DTAGRL +D+ MMDEL ++K +N T +L VDAMTGQ+A + TTFN +IG
Sbjct: 183 NHMNLVFIDTAGRLHVDEDMMDELAEIKENINVTYTVLTVDAMTGQDAVNVATTFNDKIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALS+K V+GKPI G GE++ DLEPFYP RMA RILGMGDV
Sbjct: 243 IDGVILTKLDGDTRGGAALSIKAVTGKPILYAGMGEKLTDLEPFYPSRMASRILGMGDVE 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E A+EM++K A+FDFNDF++Q + +MG + ++ M+PGM
Sbjct: 303 SLIEKAQNAIDDEKAKEMEQKFRKASFDFNDFMEQMDQLEKMGGIGDLLSMMPGMSS-QM 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ E + K +A+I++MTP ER + + SP R+KR+A +G +V++ + Q
Sbjct: 362 KNVQIDEDAGKKPKAIIQSMTPNERCLKDPI--SPSRKKRIADGAGVQIAEVNRFLKQFE 419
Query: 504 QMRVRMKNLMGVMEG 518
Q + MK + G+M G
Sbjct: 420 QSKKMMKQMSGMMGG 434
>gi|317129234|ref|YP_004095516.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
gi|315474182|gb|ADU30785.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
Length = 449
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 311/433 (71%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ +++ ++ E MR++R ALLEADV+ VV++F+ +V E+AVG
Sbjct: 3 FEGLAERLQGTLNKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKQFISSVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++K+V +EL LMGGE S++ A PTV+++ GLQG GKTT + KLA
Sbjct: 63 QEVLESLTPGQQVIKVVNEELTSLMGGEQSKIAVASKPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KK + ++VA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAK +E+AK+
Sbjct: 123 NHLRKKHNRKPLMVAADIYRPAAIKQLETLGKQLDMPVFSMGDQVSPVEIAKNAMEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL +D+ +M EL+++K + +P E+LLVVDAMTGQ+A + +FN +G
Sbjct: 183 EHHDYVLIDTAGRLHVDEELMGELEEIKALTSPDEILLVVDAMTGQDAVNVAESFNERLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTDTPIKFAGMGEKVDALEPFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A E++KK++S + F+DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQTNVDEKKARELEKKMLSNDITFDDFLEQLNQVKSMGPLDEILSMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ +K L +EA++++MT E+E P +L S RR+R+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDDKQLGHIEAIVQSMTKAEKEDPSILNAS--RRRRIAKGSGTSIQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGV 515
+M+ MK + G+
Sbjct: 421 GEMKKMMKQMAGM 433
>gi|390557792|ref|ZP_10243195.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
gi|390174633|emb|CCF82484.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
Length = 507
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 307/430 (71%), Gaps = 3/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L + ++ + TLT++++ + MR++RRALLEADV+ VV+ FV AV E+AV
Sbjct: 1 MFDTLSDRLNDVFQRIGKKGTLTEQDVDDAMREVRRALLEADVNFKVVKDFVAAVRERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ++ IVRDEL+ ++G E L A + PT+I+L GLQG GKTT AKL
Sbjct: 61 GEEVLKALTPAQQVISIVRDELINILGSERVPLQTATAPPTIIMLVGLQGSGKTTHIAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K GK +LVA DVYRPAAIDQL LG Q+ V VY+ G + P +IAK ++ A+
Sbjct: 121 AAHLRKDGKRPLLVAADVYRPAAIDQLETLGAQINVQVYSEGAKENPVKIAKNAIQYARS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V++DTAGRLQID+ MM EL+ + + PTE LLV DAMTGQEA + F+ +
Sbjct: 181 YGFNPVMIDTAGRLQIDEPMMLELEHLTEEVEPTETLLVADAMTGQEAVNVAQEFHRRLN 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALS++ V G PIK +G GER++ LEPFYPDR+A RILGMGDVL
Sbjct: 241 LTGLILTKMDGDARGGAALSIRSVVGVPIKFIGTGERIDALEPFYPDRLASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +E+AQ + +++++++++K+++ +F+ DFL+Q + + +MG +++++ MIPG+G+
Sbjct: 301 TLIERAQTEITEDESKKLEEKVLTGSFNLEDFLRQLQQIKKMGPLTQLLEMIPGIGQALR 360
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q V+ ++ K +EA+I +MTPEER +PE++ P RR+R+A SG ++ +V+QL+ Q
Sbjct: 361 QQDVQVSDDEYKHIEAIIYSMTPEERRRPEII--KPSRRRRIAMGSGTSQAEVNQLLTQF 418
Query: 503 FQMRVRMKNL 512
QM+ M +L
Sbjct: 419 KQMQKMMADL 428
>gi|352683795|ref|YP_004895779.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
gi|350278449|gb|AEQ21639.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
Length = 448
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/433 (47%), Positives = 301/433 (69%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L AA K++G++T+T++++ E +RD+R ALLEADV+ VV+ F + E+ G
Sbjct: 3 FEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERVQG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ + Q +VK+V +EL+ L+GGE S+L F+ + PTVI+LAGLQG GKTT KLA
Sbjct: 63 QKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
NYL+K GK ++VAGDVYRPAAI QL ++G+++ +PV++ G+EV P IA++ ++ A
Sbjct: 123 NYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRANAL 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D V++DTAGRL ID+ +MDELK++K ++P E+LLVVDAMTGQ+A + FN +GI
Sbjct: 183 LCDTVLIDTAGRLHIDEKLMDELKNIKTAVHPDEILLVVDAMTGQDAVTVAEAFNKALGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG I+TKLDGD+RGGA LSVK V+ P+K VG GE+++ L+PFYPDRMA RILGMGDVLS
Sbjct: 243 TGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQE + + A+ + + + F + FL Q + V R+GS+ ++ MIPGMGK +
Sbjct: 303 LIEKAQEAIDVDSAKRLAESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFSKQ 362
Query: 445 --QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V K ++ +EA+I +MTP+ER+ P ++ S RRKR+A G+ Q V++L+ Q
Sbjct: 363 FEGVDLDGKEVRRLEAIITSMTPKERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQF 420
Query: 503 FQMRVRMKNLMGV 515
+ + MK + G+
Sbjct: 421 EESKKLMKTMQGM 433
>gi|152976211|ref|YP_001375728.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
gi|152024963|gb|ABS22733.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
Length = 449
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/433 (47%), Positives = 310/433 (71%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTGLMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +MDEL VK V NP E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHHDYVLIDTAGRLHIDEELMDELAKVKEVANPDEIFLVVDAMTGQDAVNVAKSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +EPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + +K + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q
Sbjct: 363 LKNAKVDDKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLLKQF 420
Query: 503 FQMRVRMKNLMGV 515
M+ MK L G+
Sbjct: 421 EDMKKMMKTLTGM 433
>gi|393788846|ref|ZP_10376971.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
gi|392653680|gb|EIY47334.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
Length = 440
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 293/432 (67%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E + P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVE-IDTDGHPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVPMYSEPDSKNPVEIAQNAIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEEMMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIHSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|121533796|ref|ZP_01665623.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
gi|121307787|gb|EAX48702.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
Length = 444
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/423 (49%), Positives = 295/423 (69%), Gaps = 3/423 (0%)
Query: 98 KLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQL 157
+L+G LT+ ++ + +R++R ALLEADV+ V + F+ V E+AVG ++ + P Q +
Sbjct: 14 RLRGRGKLTESDVSDALREVRMALLEADVNFKVAKDFIARVKERAVGQEVMASLTPAQHV 73
Query: 158 VKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLV 217
+KIV +EL +LMGG S + + PTV++L GLQG GKTT + KLA+ LKKQ K +LV
Sbjct: 74 IKIVYEELTQLMGGTQSRITISSRPPTVVMLVGLQGAGKTTTAGKLAHLLKKQNKRPLLV 133
Query: 218 AGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRL 277
A DVYRPAAI QL +LGE++G+PV+T G + P +IA++ +E A D+VI+DTAGRL
Sbjct: 134 AADVYRPAAIKQLQVLGEKLGLPVFTLGDKESPVRIAQKAIEHALSHARDIVIIDTAGRL 193
Query: 278 QIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSR 337
I++ +MDELK +K + P E+LLVVDAMTGQ+A + FN ++GI G ILTKLDGD+R
Sbjct: 194 HINEQLMDELKAIKNTVKPHEILLVVDAMTGQDAVTVAEAFNEQLGIDGVILTKLDGDAR 253
Query: 338 GGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQED 397
GGAALSV+ V+G+PIK VG GE+++ LEPFYPDRMA RILGMGDVLS +EKA+E + E
Sbjct: 254 GGAALSVRAVTGRPIKYVGMGEKLDALEPFYPDRMASRILGMGDVLSLIEKAEEAINLEQ 313
Query: 398 AEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIM 456
A EM+KKI F +DFL Q + + ++G + +++ M+PGMG + Q ++ EK LK +
Sbjct: 314 AREMEKKIRKEEFTLDDFLDQLQQLKKLGPLDQLLSMLPGMGNLKKLQGLKFDEKELKHV 373
Query: 457 EAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 516
EA+I +MT +ER P ++ S RRKR+A SG Q V++L+ Q + + MK L +
Sbjct: 374 EAIIRSMTKKERRDPSIINGS--RRKRIAMGSGTKVQDVNRLLKQFAEAKKMMKRLQEMQ 431
Query: 517 EGG 519
+ G
Sbjct: 432 KTG 434
>gi|422692890|ref|ZP_16750905.1| signal recognition particle protein [Enterococcus faecalis TX0031]
gi|315152349|gb|EFT96365.1| signal recognition particle protein [Enterococcus faecalis TX0031]
Length = 472
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELTNPNEILLVVDAMTGQDAVNVAVSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KESKKMMQQM 430
>gi|313203704|ref|YP_004042361.1| signal recognition particle subunit ffh/srp54 (srp54) [Paludibacter
propionicigenes WB4]
gi|312443020|gb|ADQ79376.1| signal recognition particle subunit FFH/SRP54 (srp54) [Paludibacter
propionicigenes WB4]
Length = 439
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 296/439 (67%), Gaps = 7/439 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +++ N+ E ++D+R+ALL+ADV+ + + F V E+A+
Sbjct: 1 MFESLSERLERSFKILKGEGKISEINVAETLKDVRKALLDADVNFKIAKTFTDTVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P+Q +VKIV DEL +LMGG ++ K PTVIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTSLKPNQLMVKIVHDELAQLMGGASVDINL-KGSPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAAI+QL +LGEQ+GVPVY+ P IA+ ++ AK
Sbjct: 120 ANLLKTKRSKNPLLVACDVYRPAAIEQLKVLGEQLGVPVYSDLESKNPVSIAEAAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVIVDTAGRL +D+AMM+E+ +K+ +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 LHGNDVVIVDTAGRLAVDEAMMNEIAAIKKAINPQEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS++ V KPIK VG GE+M+ L+ FYP+RMA RILGMGD+
Sbjct: 240 DFDGVILTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKMDALDVFYPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +EDA +QK+I FDFNDF+ Q + + +MG++ + MIPGMGK
Sbjct: 300 VSLVERAQEQYDEEDARRLQKRIAKNQFDFNDFISQIQQIKKMGNIKDLAAMIPGMGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP ER P +L S R++R+A SG T V++L+ Q
Sbjct: 360 K-DVDIDDNAFKGIEAIIHSMTPLERANPAMLNGS--RKQRIAAGSGTTIVDVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSL 521
Q MK M M G L
Sbjct: 417 DQTSKMMK--MATMSQGKL 433
>gi|422731615|ref|ZP_16787973.1| signal recognition particle protein [Enterococcus faecalis TX0645]
gi|422739135|ref|ZP_16794318.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315144939|gb|EFT88955.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315162383|gb|EFU06400.1| signal recognition particle protein [Enterococcus faecalis TX0645]
Length = 472
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSSKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KESKKMMQQM 430
>gi|315282799|ref|ZP_07871124.1| signal recognition particle protein [Listeria marthii FSL S4-120]
gi|313613554|gb|EFR87373.1| signal recognition particle protein [Listeria marthii FSL S4-120]
Length = 450
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIAKPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|299821777|ref|ZP_07053665.1| signal recognition particle protein [Listeria grayi DSM 20601]
gi|299817442|gb|EFI84678.1| signal recognition particle protein [Listeria grayi DSM 20601]
Length = 453
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ +++ ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQEELTNLMGGEESKIAVADKPPTVLMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIQQLETLGKQLSMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++D VI+DTAGRL ID A+MDELK VK V +P E+ LVVD+MTGQ+A + +FN ++
Sbjct: 183 DHLDYVIIDTAGRLHIDDALMDELKQVKEVASPDEIFLVVDSMTGQDAVNVAESFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G ILTKLDGD+RGGAALS++ V+GKPIKLV GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 VSGVILTKLDGDTRGGAALSIRAVTGKPIKLVATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E A+EM++K+ + +DFL+Q + V +MG + ++ M+PG GK+
Sbjct: 303 SLIEKAQVDIDTEKAKEMEQKLKDNSMTLDDFLEQLQQVKQMGPLDELMKMLPGAGKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ RRKR+A+ SG+ Q+V++L+ Q
Sbjct: 363 MDNMQVDDKQLGHIEAIIKSMTKMEKDNPDIINAG--RRKRIARGSGRPIQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 NEMKKMMKQM 430
>gi|387133281|ref|YP_006299253.1| signal recognition particle protein [Prevotella intermedia 17]
gi|386376129|gb|AFJ09513.1| signal recognition particle protein [Prevotella intermedia 17]
Length = 450
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 301/445 (67%), Gaps = 5/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLDRSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGG+ + +++P +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGDAVGIKL-ENKPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI QL ++GE VGVPVY+ + IA+ +++AK
Sbjct: 120 ANLLKTKEHKKPLLVACDVYRPAAIQQLNVVGESVGVPVYSEPENKNVNAIAENAIKQAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGRL +D MMDE++ +K +NP EVL VVD+MTGQ+A FN +
Sbjct: 180 ANGNDVVIIDTAGRLAVDAEMMDEIESLKNHVNPDEVLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME L+ F+P RMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEALDVFHPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++LV Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEVLNNS--RRQRIAKGSGTNIQEVNRLVKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q R MK + G G + + N+
Sbjct: 417 EQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|375011584|ref|YP_004988572.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
gi|359347508|gb|AEV31927.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
Length = 449
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/423 (50%), Positives = 293/423 (69%), Gaps = 5/423 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A++ LKG +++ N+ E +++IRRAL++ADVS + + + E+A+
Sbjct: 1 MFDNLQDKLDKAFHVLKGHGQISEVNVAETVKEIRRALVDADVSYKIAKEVTGRIKEEAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q + KIVRDE+ +LMGG V+E+ KS P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQKVLTSLQPGQLMTKIVRDEIARLMGGSVAEMDL-KSSPSVILMAGLQGSGKTTHSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAI+QL ++GEQ+GV VY+ P IA + AK
Sbjct: 120 ANFLKRKKTKKPLLVACDVYRPAAINQLKVVGEQIGVEVYSEEGNNNPVSIATNAVAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL ID+AMM E++DV + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAIDQAMMTEIRDVHAAIKPDETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAAL+++ V KPIK +G GE+M+ L+ FYP+RMA RILGMGDV
Sbjct: 240 DYEGVILTKLDGDTRGGAALTIRTVVEKPIKFIGTGEKMDALDVFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +++A +QKKI S FDFNDFL Q + + +MG++ ++GMIPGMGK+
Sbjct: 300 VSLVERAQEQFDEDEARRVQKKIASNKFDFNDFLGQIKQIKKMGNVKDLMGMIPGMGKMM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ERE P+L+ S RR+R+A+ SGKT Q V+QL+ Q
Sbjct: 360 K-NIDIDDDAFKGVEAIIHSMTPAEREDPKLINGS--RRQRIAKGSGKTIQDVNQLLKQF 416
Query: 503 FQM 505
M
Sbjct: 417 ADM 419
>gi|228474956|ref|ZP_04059684.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|314936601|ref|ZP_07843948.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|418620446|ref|ZP_13183250.1| signal recognition particle protein [Staphylococcus hominis VCU122]
gi|228270941|gb|EEK12329.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|313655220|gb|EFS18965.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|374822576|gb|EHR86596.1| signal recognition particle protein [Staphylococcus hominis VCU122]
Length = 456
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 315/450 (70%), Gaps = 4/450 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKIRGKGKVTEADIKTMMREVRLALLEADVNFKVVKDFVKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ VPVY+ G +VKP QI L AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQLDVPVYSEGDQVKPQQIVDNALRYAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M+EL DVK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDETLMNELADVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+M+ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRAVTHKPIKFVGMSEKMDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP ER+ P +L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPNERQDPAILNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALK 532
M+ MK G G S +E+ LK
Sbjct: 421 NDMKKMMKQFTGNGRKGKKGKRSQMENMLK 450
>gi|307277934|ref|ZP_07559018.1| signal recognition particle protein [Enterococcus faecalis TX0860]
gi|306505331|gb|EFM74517.1| signal recognition particle protein [Enterococcus faecalis TX0860]
Length = 472
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKPVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KESKKMMQQM 430
>gi|229545688|ref|ZP_04434413.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255975716|ref|ZP_05426302.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256619193|ref|ZP_05476039.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256853255|ref|ZP_05558625.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|257082423|ref|ZP_05576784.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|257085055|ref|ZP_05579416.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|257090014|ref|ZP_05584375.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257416220|ref|ZP_05593214.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257422483|ref|ZP_05599473.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|300860172|ref|ZP_07106259.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|307275840|ref|ZP_07556979.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|307289238|ref|ZP_07569194.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|307291863|ref|ZP_07571734.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|312901896|ref|ZP_07761161.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|422685856|ref|ZP_16744069.1| signal recognition particle protein, partial [Enterococcus faecalis
TX4000]
gi|422689235|ref|ZP_16747347.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|422695111|ref|ZP_16753099.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|422699083|ref|ZP_16756956.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|422701890|ref|ZP_16759730.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|422704606|ref|ZP_16762416.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|422706535|ref|ZP_16764233.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|422720786|ref|ZP_16777395.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|422728773|ref|ZP_16785179.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|424761189|ref|ZP_18188771.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|428767136|ref|YP_007153247.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
gi|229309138|gb|EEN75125.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255968588|gb|EET99210.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256598720|gb|EEU17896.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256711714|gb|EEU26752.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|256990453|gb|EEU77755.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|256993085|gb|EEU80387.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|256998826|gb|EEU85346.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257158048|gb|EEU88008.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257164307|gb|EEU94267.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|295113085|emb|CBL31722.1| signal recognition particle subunit FFH/SRP54 (srp54) [Enterococcus
sp. 7L76]
gi|300849211|gb|EFK76961.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|306497129|gb|EFM66675.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|306499947|gb|EFM69308.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|306507532|gb|EFM76663.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|311291089|gb|EFQ69645.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|315029568|gb|EFT41500.1| signal recognition particle protein [Enterococcus faecalis TX4000]
gi|315032040|gb|EFT43972.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|315147394|gb|EFT91410.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|315150780|gb|EFT94796.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|315156150|gb|EFU00167.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|315163852|gb|EFU07869.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|315169591|gb|EFU13608.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|315172461|gb|EFU16478.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|315577856|gb|EFU90047.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|402402452|gb|EJV35168.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|427185309|emb|CCO72533.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
Length = 472
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KESKKMMQQM 430
>gi|15924227|ref|NP_371761.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926820|ref|NP_374353.1| hypothetical protein SA1080 [Staphylococcus aureus subsp. aureus
N315]
gi|148267728|ref|YP_001246671.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150393786|ref|YP_001316461.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156979558|ref|YP_001441817.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu3]
gi|253315595|ref|ZP_04838808.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|255006024|ref|ZP_05144625.2| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257795707|ref|ZP_05644686.1| signal recognition particle protein [Staphylococcus aureus A9781]
gi|258415931|ref|ZP_05682201.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9763]
gi|258419678|ref|ZP_05682645.1| signal recognition particle protein [Staphylococcus aureus A9719]
gi|258434849|ref|ZP_05688923.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9299]
gi|258444575|ref|ZP_05692904.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A8115]
gi|258447592|ref|ZP_05695736.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6300]
gi|258449434|ref|ZP_05697537.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6224]
gi|258454813|ref|ZP_05702777.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A5937]
gi|269202853|ref|YP_003282122.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282892724|ref|ZP_06300959.1| signal recognition particle protein [Staphylococcus aureus A8117]
gi|282927578|ref|ZP_06335194.1| signal recognition particle protein [Staphylococcus aureus A10102]
gi|295407176|ref|ZP_06816977.1| signal recognition particle protein [Staphylococcus aureus A8819]
gi|296274794|ref|ZP_06857301.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MR1]
gi|297245937|ref|ZP_06929796.1| signal recognition particle protein [Staphylococcus aureus A8796]
gi|384864464|ref|YP_005749823.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387150380|ref|YP_005741944.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus 04-02981]
gi|417651392|ref|ZP_12301155.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21172]
gi|417802688|ref|ZP_12449745.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21318]
gi|417892215|ref|ZP_12536269.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21201]
gi|418424377|ref|ZP_12997499.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427372|ref|ZP_13000384.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430213|ref|ZP_13003129.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433178|ref|ZP_13005955.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS4]
gi|418436849|ref|ZP_13008651.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439721|ref|ZP_13011428.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442773|ref|ZP_13014375.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS7]
gi|418445832|ref|ZP_13017308.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448776|ref|ZP_13020168.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451600|ref|ZP_13022934.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|418454656|ref|ZP_13025918.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457532|ref|ZP_13028735.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418569106|ref|ZP_13133446.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21272]
gi|418638085|ref|ZP_13200388.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|418654726|ref|ZP_13216622.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|418661552|ref|ZP_13223137.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878086|ref|ZP_13432321.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880914|ref|ZP_13435133.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418883843|ref|ZP_13438038.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886498|ref|ZP_13440646.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418894936|ref|ZP_13449031.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914335|ref|ZP_13468307.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920314|ref|ZP_13474247.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931307|ref|ZP_13485148.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991099|ref|ZP_13538760.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1096]
gi|424768079|ref|ZP_18195372.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CM05]
gi|443636824|ref|ZP_21120917.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21236]
gi|13701037|dbj|BAB42332.1| ffh [Staphylococcus aureus subsp. aureus N315]
gi|14247007|dbj|BAB57399.1| signal recognition particle homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|147740797|gb|ABQ49095.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylococcus aureus subsp. aureus JH9]
gi|149946238|gb|ABR52174.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156721693|dbj|BAF78110.1| signal recognition particle homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|257789679|gb|EEV28019.1| signal recognition particle protein [Staphylococcus aureus A9781]
gi|257839267|gb|EEV63741.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9763]
gi|257844263|gb|EEV68645.1| signal recognition particle protein [Staphylococcus aureus A9719]
gi|257849210|gb|EEV73192.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9299]
gi|257850068|gb|EEV74021.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A8115]
gi|257853783|gb|EEV76742.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6300]
gi|257857422|gb|EEV80320.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6224]
gi|257863196|gb|EEV85960.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A5937]
gi|262075143|gb|ACY11116.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282590581|gb|EFB95658.1| signal recognition particle protein [Staphylococcus aureus A10102]
gi|282764721|gb|EFC04846.1| signal recognition particle protein [Staphylococcus aureus A8117]
gi|285816919|gb|ADC37406.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus 04-02981]
gi|294968029|gb|EFG44057.1| signal recognition particle protein [Staphylococcus aureus A8819]
gi|297177101|gb|EFH36355.1| signal recognition particle protein [Staphylococcus aureus A8796]
gi|312829631|emb|CBX34473.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|329727576|gb|EGG64032.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21172]
gi|334274324|gb|EGL92646.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21318]
gi|341858182|gb|EGS98983.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21201]
gi|371978291|gb|EHO95541.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21272]
gi|375014551|gb|EHS08232.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023309|gb|EHS16772.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|375038734|gb|EHS31695.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694208|gb|EHT18573.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694742|gb|EHT19106.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377714589|gb|EHT38788.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714930|gb|EHT39128.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723221|gb|EHT47346.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725451|gb|EHT49564.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731807|gb|EHT55860.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757837|gb|EHT81725.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765673|gb|EHT89522.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC348]
gi|387718608|gb|EIK06566.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387718959|gb|EIK06915.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS2]
gi|387720284|gb|EIK08196.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS1]
gi|387725618|gb|EIK13222.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS4]
gi|387727953|gb|EIK15453.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|387730683|gb|EIK18044.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|387735760|gb|EIK22870.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|387737438|gb|EIK24504.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS7]
gi|387737992|gb|EIK25046.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|387744481|gb|EIK31245.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|387745771|gb|EIK32521.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387747264|gb|EIK33973.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402348716|gb|EJU83695.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CM05]
gi|408423431|emb|CCJ10842.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408425421|emb|CCJ12808.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408427409|emb|CCJ14772.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408429396|emb|CCJ26561.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408431384|emb|CCJ18699.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408433378|emb|CCJ20663.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408435369|emb|CCJ22629.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408437354|emb|CCJ24597.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|443406801|gb|ELS65371.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21236]
Length = 455
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R AL EADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALFEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|327313674|ref|YP_004329111.1| signal recognition particle protein [Prevotella denticola F0289]
gi|326946347|gb|AEA22232.1| signal recognition particle protein [Prevotella denticola F0289]
Length = 447
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 297/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKKKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKI+ DEL +LMGGE L +RP +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIMHDELAELMGGEAVGLNLV-NRPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI+QL ++GEQVGVPVY+ ++IA + EAK
Sbjct: 120 ANMLKTKEHKHPLLVACDVYRPAAIEQLKVVGEQVGVPVYSEPDNKTVNEIADHAIAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E++ +K+ + P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIIDTAGRLAVDEDMMNEIESLKKHVTPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|373464402|ref|ZP_09555941.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
gi|371762604|gb|EHO51133.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 303/429 (70%), Gaps = 10/429 (2%)
Query: 105 LTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDE 164
+++ ++ E MR+IR ALLEADV+ VVR+FV+ V ++A G ++ G+ P QQ+VKIV +E
Sbjct: 6 VSQADLRETMREIRLALLEADVNFQVVRQFVKTVEQRATGAKVLEGLNPSQQIVKIVDEE 65
Query: 165 LVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYR 223
L K+MG + L ++ PTVI+++GLQG GKTT KLA LK +Q +L+A DVYR
Sbjct: 66 LTKMMGEQAVPLNKSEKIPTVIMMSGLQGAGKTTTVGKLALKLKNEQDARPLLIADDVYR 125
Query: 224 PAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAM 283
PAAI+QL +G+Q+ VPV+ GT+V P +IAK+GL++A++ + D VI+DTAGRLQID+ +
Sbjct: 126 PAAIEQLQTVGQQIDVPVFQLGTDVDPVEIAKRGLQQAQENHNDYVIIDTAGRLQIDEKL 185
Query: 284 MDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALS 343
M ELK++K ++P E+LLV+DAMTGQ A A FN + +TG +LTKLDGD+RGGAALS
Sbjct: 186 MGELKNIKDAVHPDEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAALS 245
Query: 344 VKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQK 403
++ V+ KPIK VG+GE+M DL+ FYPDRMA RILGMGD+LS +EK Q+ Q+ AEE+Q+
Sbjct: 246 IRAVTDKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELQE 305
Query: 404 KIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIE 461
KI FDFNDFL Q + +MG M ++ MIPGM PA V K + ++A+I
Sbjct: 306 KIQENTFDFNDFLDQLSQIQKMGPMDEIMKMIPGMAN-NPALQNVNMDPKDMDHLKAIIY 364
Query: 462 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 521
+MT +ER P++L +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G++
Sbjct: 365 SMTEQERTDPDVL--NPSRRRRIAKGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNM 418
Query: 522 PALSNLEDA 530
+ N+ +A
Sbjct: 419 SGMENMMNA 427
>gi|229549880|ref|ZP_04438605.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255972664|ref|ZP_05423250.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256959109|ref|ZP_05563280.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|257079141|ref|ZP_05573502.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294781588|ref|ZP_06746924.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|307269511|ref|ZP_07550850.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|312951630|ref|ZP_07770525.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|384518726|ref|YP_005706031.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|397700009|ref|YP_006537797.1| signal recognition particle protein [Enterococcus faecalis D32]
gi|422708604|ref|ZP_16766132.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|422727183|ref|ZP_16783626.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|422734180|ref|ZP_16790474.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|422869223|ref|ZP_16915743.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|229304953|gb|EEN70949.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255963682|gb|EET96158.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256949605|gb|EEU66237.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|256987171|gb|EEU74473.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294451284|gb|EFG19750.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|306514131|gb|EFM82707.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|310630347|gb|EFQ13630.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|315037112|gb|EFT49044.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|315158208|gb|EFU02225.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|315168902|gb|EFU12919.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|323480859|gb|ADX80298.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|329571907|gb|EGG53585.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|397336648|gb|AFO44320.1| signal recognition particle protein [Enterococcus faecalis D32]
Length = 472
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELTNPNEILLVVDAMTGQDAVNVADSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KESKKMMQQM 430
>gi|153808568|ref|ZP_01961236.1| hypothetical protein BACCAC_02864 [Bacteroides caccae ATCC 43185]
gi|423219382|ref|ZP_17205878.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
gi|149128890|gb|EDM20107.1| signal recognition particle protein [Bacteroides caccae ATCC 43185]
gi|392625432|gb|EIY19498.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
Length = 440
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/428 (49%), Positives = 291/428 (67%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKNFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E V +RP VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVE-VDIDARPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y P +IA+ ++EAK
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIDVPMYCELESKNPVEIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|441499573|ref|ZP_20981753.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
gi|441436656|gb|ELR70020.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
Length = 458
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 293/445 (65%), Gaps = 7/445 (1%)
Query: 83 EMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQA 142
+MF L+ LE A+ LKG+ ++T+ N+ +++IRRAL++ADV+ V + + EQA
Sbjct: 15 DMFDNLSYKLEKAFQTLKGQGSITEVNVATTVKEIRRALIDADVNYKVAKEVTDEIKEQA 74
Query: 143 VGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAK 202
+G ++ V P Q L KI D+L +LMGG E + + P VIL++GLQG GKTT S K
Sbjct: 75 LGRDVLTAVSPGQLLTKITNDQLTELMGGR-HEDIDIEGNPAVILISGLQGSGKTTFSGK 133
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LANYLK QG+ +L A D+YRPAAIDQL +LGEQ+ V VY +IA ++ AK
Sbjct: 134 LANYLKGQGRQVLLTACDIYRPAAIDQLKVLGEQIKVDVYAEPENKDAVKIANNAIKYAK 193
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
N +VIVDTAGRL +D+ MMDE+ +K+ LNP+E L VVD+MTGQ+A FN +
Sbjct: 194 DNNKKIVIVDTAGRLAVDEEMMDEITRLKQALNPSETLFVVDSMTGQDAVNTAKAFNDRL 253
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KPIK + GE+M+ ++ F+PDRMA RILGMGDV
Sbjct: 254 NFDGVVLTKLDGDTRGGAAISIRRVVDKPIKFISTGEKMDAIDKFHPDRMANRILGMGDV 313
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQ+ +E+A + KKI FDFNDFL Q + +MG++ ++GMIPGMGK
Sbjct: 314 VSLVEKAQQTFDEEEARRLNKKIRKNQFDFNDFLSQLEQIKKMGNIKDLMGMIPGMGKAL 373
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + S K +EA+I +MT EERE+PEL+ S RRKR+A SG + Q+V+ L+ Q
Sbjct: 374 KG-IDVDDDSFKPIEAIIRSMTNEEREQPELINGS--RRKRIATGSGTSVQEVNNLLKQF 430
Query: 503 FQMRVRMKNLMGVMEGGS--LPALS 525
M+ MK M M GG L AL+
Sbjct: 431 NDMKKLMKT-MNKMGGGKKGLAALN 454
>gi|409098690|ref|ZP_11218714.1| signal recognition particle protein [Pedobacter agri PB92]
Length = 446
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 291/429 (67%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ LKG+ ++T+ N+ E M++IR+ALL+ADV+ + F V ++A+
Sbjct: 1 MFDNLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKSFTDEVRQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q L KI+ DEL LMGGEV+EL K+ PT+IL+AGL G GKTT + KL
Sbjct: 61 GQNVLTAVSPGQLLTKIMNDELAALMGGEVTELE-TKANPTIILIAGLNGAGKTTFAGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LK +GK +LVAGD+YRPAA+DQL +LG VGV VY P IA +G+ K+
Sbjct: 120 ALHLKGKGKKPLLVAGDMYRPAAVDQLEVLGTSVGVSVYANRESNDPVGIALEGIAHGKQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+V+I+DTAGRL ID+++M+E+ +VK P E+L VVD+MTGQ+A FN +
Sbjct: 180 NGNNVIIIDTAGRLAIDESLMNEISEVKAKTQPHEILFVVDSMTGQDAVNTAKVFNDRLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+ME L+ FYPDRMA RILGMGDV+
Sbjct: 240 FTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ +++A E+QKKI FDFNDF Q + + +MG+M ++GMIPG+GK+
Sbjct: 300 SLVERAQMQFDEKEAAELQKKIRKNKFDFNDFYSQIQQIKKMGNMKDLMGMIPGVGKMM- 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V + + K +EA+I +MTP E+E P+ + +S RR R+A+ SG ++V++L+ Q
Sbjct: 359 KNVDIQDDAFKSIEAIINSMTPFEKENPDAIQQS--RRLRIAKGSGSKVEEVTKLIKQFE 416
Query: 504 QMRVRMKNL 512
MR MK
Sbjct: 417 DMRKMMKQF 425
>gi|253731855|ref|ZP_04866020.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253724407|gb|EES93136.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 455
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|262037316|ref|ZP_06010787.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
gi|261748664|gb|EEY36032.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
Length = 445
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/449 (46%), Positives = 307/449 (68%), Gaps = 15/449 (3%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L + + K+ G+ LT+ NI E +R++R ALLEADV+ V + FV + ++A+
Sbjct: 1 MFNSLGDRFKDIFKKVSGQGKLTEANIKEALREVRLALLEADVNYGVAKNFVAKIRDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKS--RPTVILLAGLQGVGKTTVSA 201
G +I+GV P QQ +KIV DELV+++GG + ++ AKS PT+++L+GLQG GKTT +
Sbjct: 61 GEEVIKGVNPTQQFIKIVHDELVEVLGG--TNVLIAKSPKAPTIVMLSGLQGAGKTTFAG 118
Query: 202 KLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
KL+ +LK +G+S L+ DVYRPAA QL +L EQV VP +T +I K+G+EEA
Sbjct: 119 KLSKHLKSKGESPFLIGADVYRPAAKKQLKVLAEQVKVPSFTIDESTDVIEICKKGIEEA 178
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
K + VI+DTAGRL +D+ +M+EL+++K NP E+LLVVD MTGQ+A + TFN
Sbjct: 179 KNAHATYVIIDTAGRLHVDEQLMEELQNIKSTFNPHEILLVVDGMTGQDAVNVAKTFNDR 238
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+ ITG +LTKLDGD+RGGAALSVKEV+GKPIK + GE+++D+ PF+PDR+A RILGMGD
Sbjct: 239 LDITGVVLTKLDGDTRGGAALSVKEVAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGD 298
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM--G 439
V+S VEKAQE + + +A++M++K FDF DFLKQ + + +MGS++ ++ MIPG+ G
Sbjct: 299 VVSLVEKAQEAIDENEAKKMEEKFRKNQFDFEDFLKQFKMIRKMGSLAGIMKMIPGVDTG 358
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
I A AEK +K +E +I +MT +ER P++L S R+ R+A+ SG V++L+
Sbjct: 359 AIDMAM---AEKEMKRVEGIIFSMTVQERRDPKILNGS--RKIRIAKGSGVEVNDVNRLI 413
Query: 500 AQLFQMRVRMKNLMGVMEGGSLPALSNLE 528
Q Q MK +M + G++P L ++
Sbjct: 414 KQFEQ----MKQMMKMFNSGAIPGLGGMK 438
>gi|213962455|ref|ZP_03390717.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
gi|213954781|gb|EEB66101.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
Length = 442
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/420 (49%), Positives = 295/420 (70%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNNVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ + + + PT+IL++GLQG GKTT S KL
Sbjct: 61 GQQVLTSLQPGQLMVKIVKDELTQLMGGDAAGINLS-GNPTIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSC-MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK + +LVA DVYRPAAIDQL I+GEQVGVPV++ P IA++G++ AK
Sbjct: 120 ANYLKNKKNKKPLLVACDVYRPAAIDQLHIVGEQVGVPVFSDKGNSNPVDIAQKGVQYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +++VVIVDTAGRL +D+ MM E+ ++ + LNP E L VVDAMTGQ+A FN +
Sbjct: 180 ENHLNVVIVDTAGRLAVDEQMMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+++K V KPIK VG GE+M+ ++ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMDAIDVFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL+Q + + RMGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 360 K-DLDIKDDAFKHIEAIIHSMTPKERSTPAIIDLS--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|429765776|ref|ZP_19298056.1| signal recognition particle protein [Clostridium celatum DSM 1785]
gi|429185629|gb|EKY26603.1| signal recognition particle protein [Clostridium celatum DSM 1785]
Length = 449
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 306/430 (71%), Gaps = 2/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + KL+G+ L +++I E MR+++ ALLEADV+ VV+ FV+ VSE+ VG
Sbjct: 3 FEGLADKLQETFKKLRGKGKLGEKDIKEAMREVKLALLEADVNFKVVKTFVKNVSEKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMGG S++ F+ PTVI+L GLQG GKTT+ KLA
Sbjct: 63 SEVLESLTPAQQVIKIVNEELTDLMGGSESKINFSSVGPTVIMLVGLQGAGKTTMCGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
L+K + K +LVA D+YRPAAI QL ++G+Q+ +PV+ G ++ P QIAK+G++ A++
Sbjct: 123 LQLRKDKNKKPLLVACDIYRPAAIKQLEVVGKQIDIPVFQKGDKINPVQIAKEGIQYARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VVI+DTAGRL ID+ +M ELKDVK +NP+E+LLVVD+MTGQ+A + TFN +
Sbjct: 183 NGNNVVIIDTAGRLHIDEELMTELKDVKAEVNPSEILLVVDSMTGQDAVNVAETFNEALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G ILTKLDGD+RGGAALS++ ++ KP+K +G GE+M D E F+PDRM+ RILGMGDVL
Sbjct: 243 ISGVILTKLDGDTRGGAALSIRHMTQKPVKFIGVGEKMNDFEVFHPDRMSSRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-IT 442
S +EKAQE + +++A+E+ +K+M +F ++D+L + ++GS+S+++ MIPG+ K +
Sbjct: 303 SLIEKAQEAIDEKEAKELGQKMMENDFTYDDYLTAMDQMKKLGSISKLMEMIPGIPKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
EK L + ++I +MTP+ER P+L+ S R+KR+A+ SG T Q V++L+
Sbjct: 363 DVDFDAGEKELAKVRSIIYSMTPKERRNPKLIVGSSSRKKRIAKGSGTTLQDVNKLIKGH 422
Query: 503 FQMRVRMKNL 512
MR +MK +
Sbjct: 423 EVMRKQMKQM 432
>gi|417886283|ref|ZP_12530430.1| signal recognition particle protein [Lactobacillus oris F0423]
gi|341593781|gb|EGS36606.1| signal recognition particle protein [Lactobacillus oris F0423]
Length = 480
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/446 (47%), Positives = 303/446 (67%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFTVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAAHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + +Q+ VPV+ GT+V P +I ++G+E AK+
Sbjct: 123 LRLKNEDHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVAKQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELVNPDEILLVIDSMTGQNAVNTAQGFDDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAA+S++ V+GKPIK VG GE+M DL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMADLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ FD+NDFL Q V +MG + ++ M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A++ +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNINIDPKQFAHIKAIVLSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR MK + G++ + NL
Sbjct: 420 FNQMRKMMKQV----TNGNMSGMQNL 441
>gi|429738313|ref|ZP_19272125.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
gi|429160509|gb|EKY02970.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
Length = 450
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 294/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRAL++ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALIDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
GV ++ V+P Q +VK+V DEL +LMGG+ L KS+P +IL+AGLQG GKTT S KL
Sbjct: 61 GVNVLTAVKPGQLMVKLVHDELAELMGGDSVGLQL-KSKPAIILMAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K +LVA DVYRPAAI+QL ++ Q+GVPVY T +IA ++EAK
Sbjct: 120 ANLLKNKQNKKPLLVACDVYRPAAIEQLRVIAAQIGVPVYAEETNKNVIEIAGNAIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DV+++DTAGRL ID+ MMDE+ +K + P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGCDVILIDTAGRLAIDEQMMDEISRLKTFVQPDETLFVVDSMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
I G ILTKLDGD+RGGAALS++ V KPIK VG GE+ME L+ FYP RMA RILGMGD+
Sbjct: 240 DIDGVILTKLDGDTRGGAALSIRTVVDKPIKFVGTGEKMEALDVFYPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFL+Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIQKNKFDFNDFLQQIEQIKKMGNLKDLASMIPGVGK-A 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K +EA+I++MTP+ER P++L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 359 IKDADIDDDAFKGVEAIIKSMTPKERTNPDILNNS--RRQRIAKGSGTNIQEVNKLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|257427951|ref|ZP_05604349.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|293501045|ref|ZP_06666896.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|257274792|gb|EEV06279.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|291096050|gb|EFE26311.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 58-424]
Length = 455
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGG ALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGVALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKE 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|312903448|ref|ZP_07762628.1| signal recognition particle protein [Enterococcus faecalis TX0635]
gi|310633324|gb|EFQ16607.1| signal recognition particle protein [Enterococcus faecalis TX0635]
Length = 472
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KKSKKMMQQM 430
>gi|418642709|ref|ZP_13204895.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|375015822|gb|EHS09466.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-24]
Length = 455
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTSMNMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|21282849|ref|NP_645937.1| hypothetical protein MW1120 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486076|ref|YP_043297.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651806|ref|YP_186112.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus COL]
gi|87161356|ref|YP_493827.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194944|ref|YP_499744.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221359|ref|YP_001332181.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|221142027|ref|ZP_03566520.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253733525|ref|ZP_04867690.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|258452535|ref|ZP_05700541.1| signal recognition particle protein [Staphylococcus aureus A5948]
gi|262048135|ref|ZP_06021022.1| hypothetical protein SAD30_1911 [Staphylococcus aureus D30]
gi|262051866|ref|ZP_06024082.1| hypothetical protein SA930_1416 [Staphylococcus aureus 930918-3]
gi|284024161|ref|ZP_06378559.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 132]
gi|294848231|ref|ZP_06788978.1| signal recognition particle protein [Staphylococcus aureus A9754]
gi|297208119|ref|ZP_06924550.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912199|ref|ZP_07129642.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381199|ref|ZP_07363852.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014428|ref|YP_005290664.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VC40]
gi|384861831|ref|YP_005744551.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384869771|ref|YP_005752485.1| Signal recognition particle protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781465|ref|YP_005757636.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 11819-97]
gi|387142846|ref|YP_005731239.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TW20]
gi|415686426|ref|ZP_11450515.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|417650106|ref|ZP_12299883.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21189]
gi|417653191|ref|ZP_12302925.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21193]
gi|417797221|ref|ZP_12444419.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21305]
gi|417899954|ref|ZP_12543853.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21259]
gi|418281348|ref|ZP_12894159.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21178]
gi|418312566|ref|ZP_12924075.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21334]
gi|418316118|ref|ZP_12927562.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21340]
gi|418317672|ref|ZP_12929088.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21232]
gi|418321833|ref|ZP_12933172.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|418570822|ref|ZP_13135083.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21283]
gi|418572240|ref|ZP_13136452.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21333]
gi|418647521|ref|ZP_13209585.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649610|ref|ZP_13211638.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|418658938|ref|ZP_13220635.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|418873564|ref|ZP_13427859.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|418875172|ref|ZP_13429432.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418911844|ref|ZP_13465827.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG547]
gi|418934139|ref|ZP_13487962.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418946951|ref|ZP_13499350.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|418955426|ref|ZP_13507366.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|418988058|ref|ZP_13535731.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419774283|ref|ZP_14300253.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|421150123|ref|ZP_15609779.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742354|ref|ZP_16796360.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745532|ref|ZP_16799471.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785067|ref|ZP_18211870.1| SRP54 subunit [Staphylococcus aureus CN79]
gi|440705976|ref|ZP_20886725.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21282]
gi|440734683|ref|ZP_20914295.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443639581|ref|ZP_21123587.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21196]
gi|448742257|ref|ZP_21724207.1| signal recognition particle protein [Staphylococcus aureus
KT/314250]
gi|448744055|ref|ZP_21725959.1| signal recognition particle protein [Staphylococcus aureus KT/Y21]
gi|21204288|dbj|BAB94985.1| ffh [Staphylococcus aureus subsp. aureus MW2]
gi|49244519|emb|CAG42948.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285992|gb|AAW38086.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus COL]
gi|87127330|gb|ABD21844.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202502|gb|ABD30312.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374159|dbj|BAF67419.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|253728579|gb|EES97308.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|257859753|gb|EEV82595.1| signal recognition particle protein [Staphylococcus aureus A5948]
gi|259160267|gb|EEW45295.1| hypothetical protein SA930_1416 [Staphylococcus aureus 930918-3]
gi|259163701|gb|EEW48256.1| hypothetical protein SAD30_1911 [Staphylococcus aureus D30]
gi|269940729|emb|CBI49110.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TW20]
gi|294825031|gb|EFG41453.1| signal recognition particle protein [Staphylococcus aureus A9754]
gi|296887362|gb|EFH26264.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886445|gb|EFK81647.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751060|gb|ADL65237.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340182|gb|EFM06123.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315198476|gb|EFU28805.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140947|gb|EFW32794.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144338|gb|EFW36104.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329313906|gb|AEB88319.1| Signal recognition particle protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329724762|gb|EGG61267.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21189]
gi|329733573|gb|EGG69901.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21193]
gi|334267269|gb|EGL85733.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21305]
gi|341843562|gb|EGS84785.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21259]
gi|364522454|gb|AEW65204.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365165170|gb|EHM56998.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21178]
gi|365224448|gb|EHM65713.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|365238211|gb|EHM79048.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21334]
gi|365241789|gb|EHM82524.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21340]
gi|365244940|gb|EHM85592.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21232]
gi|371983002|gb|EHP00150.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21283]
gi|371984724|gb|EHP01833.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21333]
gi|374363125|gb|AEZ37230.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VC40]
gi|375029487|gb|EHS22814.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|375029983|gb|EHS23308.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|375037200|gb|EHS30252.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|375366101|gb|EHS70113.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370909|gb|EHS74701.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|375377148|gb|EHS80638.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|377719846|gb|EHT44016.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377725222|gb|EHT49337.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG547]
gi|377770232|gb|EHT93994.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377770882|gb|EHT94641.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383971809|gb|EID87871.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|394329513|gb|EJE55615.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|421956477|gb|EKU08806.1| SRP54 subunit [Staphylococcus aureus CN79]
gi|436431711|gb|ELP29064.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436507507|gb|ELP43187.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21282]
gi|443406788|gb|ELS65359.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21196]
gi|445546972|gb|ELY15248.1| signal recognition particle protein [Staphylococcus aureus
KT/314250]
gi|445562651|gb|ELY18818.1| signal recognition particle protein [Staphylococcus aureus KT/Y21]
Length = 455
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|323489558|ref|ZP_08094785.1| signal recognition particle-like (SRP) component [Planococcus
donghaensis MPA1U2]
gi|323396689|gb|EGA89508.1| signal recognition particle-like (SRP) component [Planococcus
donghaensis MPA1U2]
Length = 452
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 309/433 (71%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ K+KG+ + + ++ E MR++R AL+EADV+L VV+ FV+ +SE+A+G
Sbjct: 3 FEGLSERLQGTMTKIKGKGKVNEADVKEMMREVRFALIEADVNLKVVKEFVKKISERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV+DEL +LMGGE ++ F+ +PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMDSLTPGQQVVKIVKDELTELMGGEERKIEFSTKQPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+ K + +LVA DVYRPAAI QL +G+Q+ +PV++ GT++ P +IA+Q +E AK
Sbjct: 123 NLLRRKHNRKPLLVAADVYRPAAIQQLETIGKQLSLPVFSKGTDMSPVEIARQAIEHAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL +D+A+M ELKD++ + P E+ LVVD+MTGQ+A + F+ IG
Sbjct: 183 EHLDTVIIDTAGRLHVDEALMQELKDIRALKEPDEIFLVVDSMTGQDAVNVAQNFDEAIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+ KPIK VG GE+M+ LE F+P+RMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTQKPIKFVGMGEKMDALEAFHPERMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + + A+E+++K ++ F F+DFL+Q V +MG + ++ M+PG KI
Sbjct: 303 SLIEKAQSSVDEVKAKELEEKFRTSTFTFDDFLEQMSQVKQMGPLDEILKMLPGANKIKG 362
Query: 444 AQVREAEKS-LKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + ++S + +EA+I +MT +E+ PE++ S R+KR+A+ SG Q V++L+ Q
Sbjct: 363 LENAKVDESQMDRVEAIIYSMTKKEKTTPEIINAS--RKKRIAKGSGTNIQDVNRLLKQF 420
Query: 503 FQMRVRMKNLMGV 515
M+ MK + G+
Sbjct: 421 EDMKKMMKQMSGM 433
>gi|415691086|ref|ZP_11453325.1| hypothetical protein CGSSa03_05784 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315131030|gb|EFT87014.1| hypothetical protein CGSSa03_05784 [Staphylococcus aureus subsp.
aureus CGS03]
Length = 455
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R AL EADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALFEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRVSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|148655435|ref|YP_001275640.1| signal recognition particle protein [Roseiflexus sp. RS-1]
gi|148567545|gb|ABQ89690.1| signal recognition particle subunit FFH/SRP54 (srp54) [Roseiflexus
sp. RS-1]
Length = 444
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 309/441 (70%), Gaps = 7/441 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+A + KL G+ LT++++ E M+ +R ALLEADV+L VVR FV V+E+A+
Sbjct: 1 MFESLSDRLQAVFQKLGGKGKLTEDDVREAMKQVRIALLEADVNLKVVRDFVARVTEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P QQ++KIV EL+ L+G L A+ PTVI+L GLQG GKTT +AKL
Sbjct: 61 GEEVAKSLTPVQQVIKIVHQELIDLLGQANVPLAEARPGPTVIMLIGLQGSGKTTTAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+GK +LVA D+YRPAAI QL LG Q+G+PV+ GT+V P +IA+ L A+
Sbjct: 121 ALWLRKKGKRPLLVAADIYRPAAITQLESLGRQLGIPVHAEGTQVSPPEIARHALRRARD 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+N+ VI+DTAGRLQID+ +M EL+ + ++P E LLVVDAM GQEA + FN +G
Sbjct: 181 ENLTHVIIDTAGRLQIDEPLMAELEQINAAVDPVERLLVVDAMIGQEAVRVAEEFNRRVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGD 381
+TG I TK+DGD+RGGAALSV+ V+G PIK +G GE++E +EPF+PDR+A RILGMGD
Sbjct: 241 LTGVIFTKVDGDARGGAALSVRAVTGVPIKFLGSGEKVEASTIEPFHPDRLASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VLS +E+A+ + +E A +MQKK++ +FDF DFL + + ++G + +++GMIPG+ K+
Sbjct: 301 VLSLIERAEAIYDEEQARKMQKKLVKGSFDFEDFLVSMQQMRKLGPLQQILGMIPGLDKL 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
++ EK LK +EA+I +MT EER P+L+ R++R+A+ SG Q+V+QLV Q
Sbjct: 361 AREEII-TEKDLKKIEAIIFSMTKEERRNPDLIKGR--RKERIARGSGTQVQEVTQLVNQ 417
Query: 502 LFQMRVRMKNLMGVMEGGSLP 522
QM+ MK + G +GG P
Sbjct: 418 FRQMQRMMKRMGG--KGGIDP 436
>gi|429752041|ref|ZP_19284928.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429178225|gb|EKY19508.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 444
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/420 (49%), Positives = 296/420 (70%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNNVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ + + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GQQVLTTLQPGQLMVKIVKDELTQLMGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSC-MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK + +LVA DVYRPAAIDQL I+GEQVGVPV++ P IA++G++ AK
Sbjct: 120 ANYLKNKKNKKPLLVACDVYRPAAIDQLHIVGEQVGVPVFSDKDNNNPVDIAQKGVQYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +++VVI+DTAGRL +D+ MM+E+ ++ + LNP E L VVDAMTGQ+A FN +
Sbjct: 180 ENHLNVVIIDTAGRLAVDEQMMNEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+++K V KPIK VG GE+M+ ++ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMDAIDVFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL+Q + + RMGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 360 K-DLDIKDDAFKHIEAIIHSMTPKERSTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|417887086|ref|ZP_12531225.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21195]
gi|341858508|gb|EGS99298.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21195]
Length = 455
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A+ ++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKYLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|331269654|ref|YP_004396146.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
gi|329126204|gb|AEB76149.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
Length = 451
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/417 (48%), Positives = 297/417 (71%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ KL+G+ L++++I E MR+++ ALLEADV+ +VR FV+ E+ +G
Sbjct: 3 FEGLAEKLQDTLKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKIVRNFVKTTGEKCLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV DEL +LMG S++ F+ + TVI+L GLQG GKTT++ KLA
Sbjct: 63 EEVMKSLTPGQQVVKIVNDELKELMGSTESKIEFSSTGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA D+YRPAAI QL ++G Q+ +PV++ G +V P IAK +E AK
Sbjct: 123 LQLRKNNKKPLLVACDIYRPAAIKQLQVVGNQIDIPVFSMGDKVNPVDIAKASIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+A+MDEL+++K + P E+LLVVD+MTGQ+A + TFN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEALMDELENIKTSVEPNEILLVVDSMTGQDAVNVSETFNNKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQE + +E A+E+ K+++ F+ DF + + +MG ++++I M+PG+ ++
Sbjct: 303 LIEKAQEAIDEEKAKELGDKMLNLEFNLEDFKESMAQMKKMGPLTKLIEMMPGVNSKQLQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ EK L +EAMI++MT +ER+ P +++ SP R++R+A SG QQV++L+
Sbjct: 363 GLDLSNGEKELTKIEAMIDSMTLKERKDPSVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|325290414|ref|YP_004266595.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
gi|324965815|gb|ADY56594.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
Length = 461
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/439 (48%), Positives = 302/439 (68%), Gaps = 4/439 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+A + +LKG+ LT+ ++ E MR++R ALLEADV+ VV+ + + E+AV
Sbjct: 3 MFEGLSEKLQATFKRLKGKGKLTEADVNEAMREVRVALLEADVNFKVVKDLIAKIKERAV 62
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +E+V +MGG S+L + PTV++L GLQG GKTT AKL
Sbjct: 63 GQEVLESLTPGQHVIKIVNEEMVAMMGGSESKLAISSKPPTVVMLVGLQGAGKTTHGAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LGEQ+ VPV++ G E P +IA + L+ A K
Sbjct: 123 ANMLKKQGKHPLLVACDIYRPAAIKQLQVLGEQIKVPVFSLGQE-NPVKIAGESLDYAGK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D VI+DTAGRL I++ +M EL+D+K V+ P E+LLVVDAMTGQ+A + TFN ++
Sbjct: 182 NGHDTVIIDTAGRLHINEELMGELEDIKAVVQPHEILLVVDAMTGQDAVNVAETFNSKLA 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G IL+KLDGD+RGGAA+SV+ V+G PIK G GE+M+ LE FYPDRM RILGMGDVL
Sbjct: 242 LSGVILSKLDGDTRGGAAISVRSVTGCPIKYAGVGEKMDALEVFYPDRMVSRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + A+E+++KI +DFL Q + +MGS+S V+ MIPG+GK
Sbjct: 302 TLIEKAQNAFDDKKAKELEEKIRKQELTLDDFLDQINQLRKMGSLSSVLEMIPGIGK-QL 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ +K +EAMI++MT EER +P ++ +S R+KR+A+ SG + Q V +L+ Q
Sbjct: 361 KDVQIDDKEFARVEAMIQSMTVEERTRPAVIKDS--RKKRIARGSGTSVQDVGKLIKQYE 418
Query: 504 QMRVRMKNLMGVMEGGSLP 522
Q + MK + G+ G P
Sbjct: 419 QTKKMMKQMSGLPGMGGPP 437
>gi|333371175|ref|ZP_08463137.1| signal recognition particle protein [Desmospora sp. 8437]
gi|332976619|gb|EGK13460.1| signal recognition particle protein [Desmospora sp. 8437]
Length = 449
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 305/429 (71%), Gaps = 4/429 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++A KL+G+ +++ ++ MR++R ALLEADV+ VV+ FV V E+AVG
Sbjct: 3 FEGLSERLQSALAKLRGKGKVSEADVKVAMREVRLALLEADVNYKVVKDFVSKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V +EL LMGG +L S+P+VIL+ GLQG GKTT + KL
Sbjct: 63 QEVLKSLTPGQQVIKVVNEELSSLMGGTQEKLNLT-SKPSVILMVGLQGAGKTTTTGKLG 121
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+LKKQ + +LVAGDVYRPAAI QL +LG+QV +PV++ G + P +IA G+ +AK++
Sbjct: 122 RFLKKQNRHPLLVAGDVYRPAAIRQLEVLGDQVELPVFSMGDQESPVRIAVDGVAKAKEE 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D V++DTAGRL ID+ MM ELK ++ + P E+LLVVDAMTGQ+A + +FN E+G+
Sbjct: 182 GHDTVLIDTAGRLHIDETMMGELKAIREKVQPDEILLVVDAMTGQDAVNVAESFNRELGL 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALSVK V+ P+K VG GE+++ LEPF+P+RMA RILGMGDVL+
Sbjct: 242 TGVILTKLDGDTRGGAALSVKSVTDCPVKFVGMGEKVDALEPFHPERMASRILGMGDVLT 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + QE A+++++K+ + F F+DFL+Q V MG + ++GM+PGMG++
Sbjct: 302 LIEKAQASVDQEKAKDLERKLRTQQFTFDDFLEQMEQVRNMGPLDELLGMMPGMGQMKNM 361
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ EK L +EA+I +MT EE++ PE++ RR+R+A SG T Q V++L+ Q
Sbjct: 362 KNLQVDEKQLTKVEAIIRSMTREEKQNPEIINAG--RRRRIAAGSGTTVQDVNRLIKQFM 419
Query: 504 QMRVRMKNL 512
M+ MKN
Sbjct: 420 DMKKMMKNF 428
>gi|196247664|ref|ZP_03146366.1| signal recognition particle protein [Geobacillus sp. G11MC16]
gi|196212448|gb|EDY07205.1| signal recognition particle protein [Geobacillus sp. G11MC16]
Length = 433
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 300/409 (73%), Gaps = 4/409 (0%)
Query: 96 WNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQ 155
N+++G+ +T+ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P Q
Sbjct: 1 MNRIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVGQEVLKSLTPGQ 60
Query: 156 QLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSC 214
Q++K+V++EL LMGGE S++ AK PTV+++ GLQG GKTT + KLAN L+K +
Sbjct: 61 QVIKVVKEELTALMGGEQSKIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKP 120
Query: 215 MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTA 274
+LVA DVYRPAAI QL LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTA
Sbjct: 121 LLVAADVYRPAAIKQLETLGKQLNMPVFSLGEHANPVEIAKQALERAKEEHHDYVLIDTA 180
Query: 275 GRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 334
GRL +D+A+MDELK ++ + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDG
Sbjct: 181 GRLHVDEALMDELKQMREAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDG 240
Query: 335 DSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQ 394
D+RGGAALS++ V+G PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ +
Sbjct: 241 DTRGGAALSIRAVTGAPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVD 300
Query: 395 QEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSL 453
+E A+E+++K+ +A F F+DFL Q V ++G + ++ M+PG KI ++ EK +
Sbjct: 301 EEKAKELEQKMRTATFTFDDFLDQLGQVRKLGPLDEILKMLPGANKIKGLDNIQVDEKQI 360
Query: 454 KIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+EA+I +MT EE+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 361 ARVEAIIRSMTKEEKMHPEIINGS--RKKRIAKGSGTTVQEVNRLLKQF 407
>gi|212703525|ref|ZP_03311653.1| hypothetical protein DESPIG_01570 [Desulfovibrio piger ATCC 29098]
gi|212673025|gb|EEB33508.1| signal recognition particle protein [Desulfovibrio piger ATCC
29098]
Length = 502
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/435 (48%), Positives = 293/435 (67%), Gaps = 6/435 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L + G LT+ENI +R++R ALLEADV+ VV+ FV+ V ++ +
Sbjct: 1 MFESLSDRLSGVFRSFSGRGQLTEENIQAGLREVRLALLEADVNFKVVKDFVENVRQKCL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G LI+GV P QQ+VKIV +ELV L+GGE + L P VI+L GLQG GKTT + K+
Sbjct: 61 GQELIKGVSPAQQVVKIVHEELVGLLGGETAGLNLQGQEPAVIMLVGLQGSGKTTSAGKI 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQ LV DVYRPAAIDQL +L +Q+ +P + + ++ P IA+Q +E A++
Sbjct: 121 ANLLRKQKMRPYLVPADVYRPAAIDQLTVLAKQLDMPCFPSTVDMNPVDIARQAMEAARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VV++DTAGRL +D+ +M EL +K +NP E+L V DAMTGQ+A + +FN +G
Sbjct: 181 QQATVVLLDTAGRLHVDEPLMQELAAIKAAVNPQEILFVADAMTGQDAVTVAESFNERLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTK+DGD+RGGAALS++ V+G P+K VG GE++ ++E F+PDR+AGRILGMGDVL
Sbjct: 241 LTGVVLTKMDGDARGGAALSIRAVTGAPVKFVGMGEKLSEMEIFHPDRIAGRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---- 439
+ VEKAQ + ++AE + KK+ A+FD DF Q R + ++GS+ ++ MIPGMG
Sbjct: 301 TLVEKAQATIDADEAEALAKKMRKASFDLEDFRTQMRRIKKLGSLDSILKMIPGMGGLRE 360
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
K+ A EK + EA+I +MT ER P++L S RR R+A+ +G T QQV+QLV
Sbjct: 361 KLAEANGAMPEKEMARTEAIINSMTMAERRNPDILNGS--RRARIAKGAGVTVQQVNQLV 418
Query: 500 AQLFQMRVRMKNLMG 514
Q QMR MK +MG
Sbjct: 419 RQFEQMRQMMKGMMG 433
>gi|326803882|ref|YP_004321700.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650579|gb|AEA00762.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 491
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/473 (44%), Positives = 319/473 (67%), Gaps = 14/473 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A K+ + +++ ++ E MR++R ALLEADV+ VV+ FV+ V ++A+
Sbjct: 3 FESLSDRLQGAVEKVGKKGKISEGDLREMMREVRLALLEADVNFKVVKNFVRKVQDKALN 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +L+GGE + + ++ PT+I++AGLQG GKTT KLA
Sbjct: 63 SDVLESLSPTQQIVKIVDEELTELLGGEQVGINYNEAGPTIIMMAGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L+++ + +LVA DVYRPAAIDQL +G Q+ +PV+ G +V P IA++ + AK+
Sbjct: 123 NHLREEDHRKPLLVAADVYRPAAIDQLETIGRQLDLPVFQLGNQVSPVDIAQKAVAYAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N D + +DTAGRLQID+ +MDELK+++ ++P E+LL VDAM+GQEAA + TF+ E+
Sbjct: 183 NNYDTIFIDTAGRLQIDQTLMDELKNIQAAVHPDEILLTVDAMSGQEAANVAKTFDEELE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+ ++GKPIK G GE++ED+E FYPDRM+ RILGMGD++
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIASITGKPIKFTGVGEKLEDIETFYPDRMSNRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +++AEEM K+ + +DFNDF+KQ + +MGS +I MIPG+ KI P
Sbjct: 303 TLIEKAQKEFDEKEAEEMAAKMQANTYDFNDFVKQMDQMNKMGSFESIIKMIPGLNKILP 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ K + +A+I++MT ER P+ + +S RR+R+A+ S T QV+QL+ Q
Sbjct: 363 VDKLNIDPKDMVRTKAIIQSMTDYERTHPDEINQS--RRRRIAKGSATTVNQVNQLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPP------GTARRKRRSE 549
Q R +M M G + +LS+L + + P G R+K+R++
Sbjct: 421 NQSRT----MMSAMTNGDMSSLSSLMGGMPNGMGNMPNMPGMDGGRRKKQRAQ 469
>gi|313888484|ref|ZP_07822151.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845513|gb|EFR32907.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 445
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 294/429 (68%), Gaps = 3/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ L+G+ L++++I MR+++ ALLEADV+ VV+ FV+ V E+A+
Sbjct: 2 VFESLSDKLQNTLQNLRGKGKLSEKDIDAAMREVKLALLEADVNFRVVKDFVKTVKERAL 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL LMG ++ F+K +PTVI++ GLQG GKTT S KL
Sbjct: 62 GKEVLESLTPGQQVIKIVNEELTSLMGTSEVKIDFSK-KPTVIMMCGLQGAGKTTTSGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKK GK +LVA DVYRPAAI QL ++GE V PV+T G ++ P I+K LE AKK
Sbjct: 121 ANKLKKDGKRPLLVACDVYRPAAIKQLQVVGESVDTPVFTMGDKISPVDISKAALEHAKK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL ID+A+M EL+D+ L P+EVLLV+DAMTGQ+A + TF+ +
Sbjct: 181 NGNDVVIIDTAGRLHIDEALMKELQDIHEALEPSEVLLVLDAMTGQDAVNVADTFDDMLK 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+ PIK + GE+M+++E F+PDRMA RILGMGDVL
Sbjct: 241 LTGVILTKLDGDARGGAALSIRSVTDVPIKFIASGEKMDNIEVFHPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + + A+E+++K+ + F F DFL Q + + MG + +IGMIPGM
Sbjct: 301 SLIEKAQSAVDDKKAKELEEKLRKSTFTFEDFLDQMQQMKNMGPLEDIIGMIPGMNSKAL 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + +EA+I +MT +ER+KPE++ S RRKR+A+ SG + V++L+ Q
Sbjct: 361 KGISLPDNEFAKVEAIILSMTKKERQKPEIIDSS--RRKRIAKGSGTSPADVNKLIKQFK 418
Query: 504 QMRVRMKNL 512
MR MK
Sbjct: 419 DMRKMMKQF 427
>gi|312130725|ref|YP_003998065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Leadbetterella byssophila DSM 17132]
gi|311907271|gb|ADQ17712.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Leadbetterella byssophila DSM 17132]
Length = 438
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/436 (48%), Positives = 292/436 (66%), Gaps = 4/436 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L A+ LKG+ +T NI +++IRRAL++ADV+ V + V ++A+
Sbjct: 1 MFQSLQDKLNGAFKTLKGKGKITDINIASTVKEIRRALMDADVNYKVAKEVTDKVKQEAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
++ V P Q VKIV++EL LMGG+ +E V K P V+L+AGLQG GKTT S K
Sbjct: 61 DRKVMIAVEPGQLFVKIVQEELTALMGGK-AETVNLKGSPAVVLIAGLQGSGKTTFSGKF 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYLKKQGK MLVA DVYRPAAI QL +LGEQ+GV VY IA+ + EAK
Sbjct: 120 ANYLKKQGKQVMLVAADVYRPAAITQLQVLGEQIGVDVYAEPENKDAVNIARNAVAEAKS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K +VIVDTAGRL +D+ MM E++++K+ ++P+E+L VVD+MTGQ+A FN +
Sbjct: 180 KGKSIVIVDTAGRLAVDEVMMTEVENIKKAISPSEILFVVDSMTGQDAVNTAKAFNDRLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGDSRGGAALS++ V KP+K + GE+MEDL+ F+PDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDSRGGAALSIRAVVDKPVKFMSTGEKMEDLDIFHPDRMASRILGMGDVI 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +++A ++ KK+ NFD NDFL Q + +MG++ V+GMIPGMG
Sbjct: 300 SLVERAQQAFDEDEARKLNKKMRENNFDLNDFLGQLEQIKKMGNLKDVMGMIPGMGAAIK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V + S K +E++I++MTP+ER +P+++ S RRKR+A +G++ Q+V+ L+ Q
Sbjct: 360 -DVDISNDSFKPIESIIKSMTPKERSQPDIIDGS--RRKRIATGAGRSIQEVNNLLKQFE 416
Query: 504 QMRVRMKNLMGVMEGG 519
QM+ MK + GG
Sbjct: 417 QMKKMMKKFNAMTPGG 432
>gi|392390806|ref|YP_006427409.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
gi|390521884|gb|AFL97615.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
Length = 446
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 302/450 (67%), Gaps = 12/450 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A + LKG +++ N+ E +++IRRAL++ADVS V + F V ++A+
Sbjct: 1 MFQSLQDKLDNALHTLKGHGHISEINVAETIKEIRRALVDADVSYKVAKDFTNKVKDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q + KIV DE+ +LMGGE EL + + PT+IL+AGLQG GKTT S KL
Sbjct: 61 GQNVLTTLNPGQLMTKIVHDEMAELMGGETQELNVS-ANPTIILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSC-MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +LKK+ +LVAGDVYRPAAIDQL +LGEQ+ VPVYT P +IA+ L++A+
Sbjct: 120 AQFLKKKKSKKPLLVAGDVYRPAAIDQLKVLGEQIDVPVYTEEGNKNPVEIAQNALQQAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ N +V+IVDTAGRL ID+AMM E+++V + + PTE L VVD+MTGQ+A FN +
Sbjct: 180 QNNNNVIIVDTAGRLAIDEAMMQEIRNVHQAIKPTETLFVVDSMTGQDAVNTAKAFNEVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAAL+++ V KPIK + GE+++ L+ F+P RMA RILGMGDV
Sbjct: 240 DYDGVVLTKLDGDTRGGAALTIRTVVDKPIKFISTGEKLDKLDVFHPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFLKQ + + RMG+M ++GMIPG GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIAKNKFDFNDFLKQIKQIKRMGNMKDLLGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MT +ERE P ++ S R++R+A+ G++ Q V+QL+ Q
Sbjct: 360 KG-IEIDDDAFKHVEAIIYSMTNQERENPNIIDAS--RKRRIARGCGRSVQDVNQLLKQF 416
Query: 503 FQMRVRMKNL-------MGVMEGGSLPALS 525
QM MK + M M G +P ++
Sbjct: 417 SQMGKMMKFMQSSQGKAMMKMMGSKIPGMN 446
>gi|282920020|ref|ZP_06327749.1| signal recognition particle protein [Staphylococcus aureus A9765]
gi|418286466|ref|ZP_12899112.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21209]
gi|418579068|ref|ZP_13143163.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418903446|ref|ZP_13457487.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418925470|ref|ZP_13479372.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928494|ref|ZP_13482380.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1612]
gi|282594736|gb|EFB99720.1| signal recognition particle protein [Staphylococcus aureus A9765]
gi|365167174|gb|EHM58650.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21209]
gi|377697095|gb|EHT21450.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377738406|gb|EHT62415.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742461|gb|EHT66446.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744539|gb|EHT68516.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG2018]
Length = 455
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|257425291|ref|ZP_05601716.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257430584|ref|ZP_05606966.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433345|ref|ZP_05609703.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257436187|ref|ZP_05612234.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M876]
gi|282914013|ref|ZP_06321800.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M899]
gi|282924058|ref|ZP_06331734.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C101]
gi|293510006|ref|ZP_06668714.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M809]
gi|293526593|ref|ZP_06671278.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M1015]
gi|257271748|gb|EEV03886.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257278712|gb|EEV09331.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281438|gb|EEV11575.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284469|gb|EEV14589.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M876]
gi|282314030|gb|EFB44422.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C101]
gi|282322081|gb|EFB52405.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M899]
gi|290920665|gb|EFD97728.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M1015]
gi|291466950|gb|EFF09468.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M809]
Length = 455
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL KLMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGG ALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGVALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|325269145|ref|ZP_08135765.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
gi|324988532|gb|EGC20495.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
Length = 453
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L + RP VIL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGEAVGLNLS-GRPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K+ +LVA DVYRPAA++QL ++G QVG PVY+ ++IA + EAK
Sbjct: 120 ANMLKTKEHKNPLLVACDVYRPAAVEQLKVVGGQVGAPVYSEPGNKNVNEIADHAIAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVI+DTAGRL +D+ MMDE++ +K +NP E L VVD+MTGQ+A FN +
Sbjct: 180 ARGNDVVIIDTAGRLAVDEEMMDEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERSHPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|313205775|ref|YP_004044952.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485092|ref|YP_005394004.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386322241|ref|YP_006018403.1| hypothetical protein RIA_2012 [Riemerella anatipestifer RA-GD]
gi|407452570|ref|YP_006724295.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|416111226|ref|ZP_11592483.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|442315048|ref|YP_007356351.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
gi|312445091|gb|ADQ81446.1| signal recognition particle subunit FFH/SRP54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315022827|gb|EFT35851.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|325336784|gb|ADZ13058.1| Ffh [Riemerella anatipestifer RA-GD]
gi|380459777|gb|AFD55461.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|403313554|gb|AFR36395.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|441483971|gb|AGC40657.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
Length = 454
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 288/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A + L G +T+ N+ E +++IRRAL++ADV+ V + + V E+A+
Sbjct: 1 MFNSLQDKLDKALHNLSGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q + KIV DELV+LMGG E + +PTVIL+AGLQG GKTT S KL
Sbjct: 61 GQNVLTSLTPGQLMTKIVHDELVELMGGS-QEGINLSGKPTVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLKK+ K+ +LVA DVYRPAAIDQL +LG Q G+PVYT PS IA+ + AK
Sbjct: 120 ANYLKKKRAKNPLLVACDVYRPAAIDQLKVLGSQTGIPVYTEEENKNPSTIAENAVNFAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVIVDTAGRL ID+ MM+E+K V + PTE L VVD+MTGQ+A FN +
Sbjct: 180 ANKHDVVIVDTAGRLAIDEQMMNEIKSVHYFIKPTETLFVVDSMTGQDAVNTAKAFNDAL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAAL+++ V KPIK + GE+ME L+ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAALTIRSVVNKPIKFISTGEKMEALDLFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+++QKKI F F+DFLKQ + + +MG+M ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKKLQKKIAKNEFGFDDFLKQIQQIKKMGNMKDLLGMLPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + S K +EA+I +MTPEER +P ++ + R+KR+A+ SG+ ++V+QL+ Q
Sbjct: 360 -KDVDIDDNSFKHIEAIIHSMTPEERRRPSIIDVN--RKKRIAKGSGRKLEEVNQLMKQF 416
>gi|163814209|ref|ZP_02205601.1| hypothetical protein COPEUT_00363 [Coprococcus eutactus ATCC 27759]
gi|158450658|gb|EDP27653.1| signal recognition particle protein [Coprococcus eutactus ATCC
27759]
Length = 448
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 300/438 (68%), Gaps = 10/438 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+ + LT++++ E M++++RALLEADV+ VV+ FV++VS++AVG
Sbjct: 3 FDSLSDKLQNVFKKLRSKGVLTEDDVKEAMKEVKRALLEADVNFKVVKSFVKSVSDRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP----TVILLAGLQGVGKTTVS 200
+++G+ P ++KIV++E+ KLMG E++E+ K RP T+I++ GLQG GKTT +
Sbjct: 63 EEVLKGLNPGHMVIKIVKEEMDKLMGSEMTEI---KLRPSNEITIIMMCGLQGAGKTTTA 119
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
AKLA K +GK +LVA DVYRPAAI QL + GE+VGVPV+ G KP IAK ++
Sbjct: 120 AKLAYQFKNKGKKPLLVACDVYRPAAIKQLQVNGEKVGVPVFAMGDNNKPLDIAKAAIQH 179
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
A K N+++V +DTAGRL +D+ MMDEL ++K L+ +L VD+MTGQ+A + TTFN
Sbjct: 180 AAKNNINLVFLDTAGRLHVDEDMMDELAEIKANLDIAYTILTVDSMTGQDAVNVATTFND 239
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
+IGI G ILTKLDGD+RGGAALS+K V+GKPI G GE++ DLEPFYPDRMA RILGMG
Sbjct: 240 KIGIDGVILTKLDGDTRGGAALSIKAVTGKPILYSGMGEKLTDLEPFYPDRMASRILGMG 299
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
DV S +EKAQ + +E A+EM++K A+FDFNDFL Q + +MG M ++ M+PGM
Sbjct: 300 DVESLIEKAQSAIDEEKAKEMEQKFRKASFDFNDFLDQMAQLEQMGGMQEILSMMPGMAS 359
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
V E + K +A++ +MTP ER + + SP R+KR+A +G V++ +
Sbjct: 360 -QMKNVEIDENAAKTPKAIVLSMTPRERSLQDPI--SPSRKKRIADGAGVQIADVNRFLK 416
Query: 501 QLFQMRVRMKNLMGVMEG 518
Q Q + MK + G+M G
Sbjct: 417 QFEQSKKMMKQMSGMMGG 434
>gi|410460649|ref|ZP_11314323.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
gi|409926703|gb|EKN63857.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
Length = 447
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 311/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +++G+ +T++++ E MR++R ALLEADV+ VV+ F++ V E+AVG
Sbjct: 3 FEGLADRLQNTIQRIRGKGKVTEDDVNEMMREVRLALLEADVNFKVVKDFIKRVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGG S++ + PTV+++ GLQG GKTT + KL+
Sbjct: 63 QEVMKSLTPGQQVIKVVQEELTELMGGSQSKIAVSNRPPTVVMMVGLQGAGKTTTTGKLS 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLNIPVFSLGDQVSPVEIAKQAVEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDELK +K + P E+ LVVDAMTGQ+A + +FN ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDETLMDELKQIKELAKPDEIFLVVDAMTGQDAVNVAESFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS+K V+ PIK VG GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGTILTKLDGDTRGGAALSIKAVTNIPIKFVGMGEKLDQLEDFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + QE A+E+++K+ + +F F+DFL+Q V +MG + +IGM+PG KI
Sbjct: 303 TLIEKAQANVDQEKAKELEEKMRTMSFTFDDFLEQLAQVRKMGPLDDLIGMLPGANKIKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK +K +EA+I++MT +E+ PE++ S R+KR+A+ SG+T Q+V++L+ Q
Sbjct: 363 LKDLKVDEKQIKHVEAIIQSMTKKEKVNPEIINAS--RKKRIAKGSGRTVQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
M+ K +
Sbjct: 421 EDMKKMFKQM 430
>gi|418906172|ref|ZP_13460199.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377765472|gb|EHT89322.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC345D]
Length = 455
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ LT+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + + PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPVERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|375090633|ref|ZP_09736947.1| signal recognition particle protein [Facklamia languida CCUG 37842]
gi|374565394|gb|EHR36665.1| signal recognition particle protein [Facklamia languida CCUG 37842]
Length = 490
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/452 (46%), Positives = 312/452 (69%), Gaps = 8/452 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + +++ +T+ ++ + MR+IR ALLEADV+ VV+ FV+ V+E+A+G
Sbjct: 3 FEGLSQRLQDSISQVGKGGKITEADLKQMMREIRLALLEADVNFKVVKTFVKQVNERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV +EL +LMGGE L A PTVI++AGLQG GKTT KLA
Sbjct: 63 SEVLQSLSPAQQVVKIVDEELTELMGGEQVPLNLATQPPTVIMMAGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYLK+QG K +LVAGDVYRPAAIDQL +G Q+ V++ GT+V P +IA+Q LE A+
Sbjct: 123 NYLKEQGLKRPLLVAGDVYRPAAIDQLETIGRQLNFEVFSQGTDVSPVEIARQALERARI 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ DVV++DTAGRL +++ +M+ELK +K ++P E+LL VDAMTGQ+A + FN +
Sbjct: 183 QGNDVVLIDTAGRLHVNEELMNELKQIKAAVHPDEILLTVDAMTGQDAVNVAQAFNDALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG I+TKLDGD+RGGAALS++ + KPIK G+GE++ LEPF+PDRM+ RILGMGD++
Sbjct: 243 ITGVIITKLDGDTRGGAALSIRSIIDKPIKFTGQGEQLNALEPFHPDRMSSRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E+A +M KI A+FDFNDF+ Q V +MG + +I MIPG+ K+
Sbjct: 303 TLIEKAQQDFDEEEAAKMADKIKDASFDFNDFIDQMDQVRKMGPLKDLIKMIPGINKVPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q +K + + A++++MTP ER P+ +++S RR+R+A G+T +V+QL+ Q
Sbjct: 363 IQDFNIDDKDMNRIRAVVQSMTPYERTHPDEISQS--RRRRIASGCGQTLNEVNQLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNLEDALKSE 534
Q R N+M M G + ++ + + ++ +
Sbjct: 421 NQSR----NMMAQMSNGKMSGMNKMMNQMQQQ 448
>gi|365902815|ref|ZP_09440638.1| signal recognition particle protein [Lactobacillus malefermentans
KCTC 3548]
Length = 478
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/449 (47%), Positives = 307/449 (68%), Gaps = 13/449 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A K++G+ +T ++ E MR+IR ALLEADV+ VV+ FV+ V ++A G
Sbjct: 3 FEGLTERLQNAMKKIRGKGKVTDADLRETMREIRLALLEADVNFDVVKNFVKTVRDRASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV +EL K MG E L + PT+I+++GLQG GKTT KLA
Sbjct: 63 TKVLEGLNPAQQIVKIVDEELTKTMGEEAVPLNKSDKIPTIIMMSGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK K+ +++A D+YRPAAIDQLV +GEQ+ VPV+ GT+V P +I ++GLE+A +
Sbjct: 123 NKLKTDEKARPLMIAADIYRPAAIDQLVQVGEQIDVPVFEMGTDVNPVEIVRKGLEKAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V +DTAGRLQID+ +M EL D+K + +P E+LLV+DAMTGQ A A F+ ++
Sbjct: 183 DHNDYVFIDTAGRLQIDEQLMQELSDIKELAHPDEILLVIDAMTGQNAVATAEGFDKKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ +GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAATGKPIKFVGQGEKMADLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ + A+E+ +K+ FDFNDFL Q + MG M +I MIPGM P
Sbjct: 303 SLIEKTQKKFDDKQAQELTEKMRENTFDFNDFLDQMTQIQSMGPMEDLIKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ K ++ +A++ +MT ERE+PE+L +P RR+R+A SG+ +V++++ Q
Sbjct: 362 ALKNVQMDPKDIEHTKAVVYSMTTAERERPEIL--NPSRRRRIAAGSGRPIHEVNRMIKQ 419
Query: 502 LFQMRVRMK-----NLMGV--MEGGSLPA 523
+M+ M+ N+ G+ + GGS+P
Sbjct: 420 FGEMKKMMQQASNGNMSGMEGLMGGSMPG 448
>gi|254974797|ref|ZP_05271269.1| signal recognition particle protein [Clostridium difficile
QCD-66c26]
gi|255092185|ref|ZP_05321663.1| signal recognition particle protein [Clostridium difficile CIP
107932]
gi|260682859|ref|YP_003214144.1| signal recognition particle protein [Clostridium difficile CD196]
gi|260209022|emb|CBA62118.1| signal recognition particle protein [Clostridium difficile CD196]
Length = 452
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 305/453 (67%), Gaps = 11/453 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT+ ++ MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PT++++ GLQG GKTT + KL
Sbjct: 62 GQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA D+YRPAAI QL ++GE++ +PV+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +M ELK +K + P E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 NANDLVIIDTAGRLHIDEVLMAELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++KI DF DFL+Q + MG + +++GMIPGMG +
Sbjct: 302 SLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKD 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K +K +A+I++MT ER P +L S R+KR+A+ SG + Q V++L+ Q
Sbjct: 362 QLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEG-------GSLPALSNL 527
L +M+ MK G + G LP L+ +
Sbjct: 420 LNEMKKMMKMFAGSQKSMKKRGGLGGLPFLNKI 452
>gi|327404872|ref|YP_004345710.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
gi|327320380|gb|AEA44872.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
Length = 449
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 291/428 (67%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT E A+ LKG+ +T+ N+ E ++++RRALL+ADV+ + F V ++A+
Sbjct: 1 MFDNLTDKFERAFKVLKGQGQITEINVAETLKEVRRALLDADVNFKTAKDFTVRVKDKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KI +ELV+LMGG SE+ + P VIL++GLQG GKTT S KL
Sbjct: 61 GENVLTAISPSQLMIKICHEELVELMGGNESEIQI-QGTPGVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYL+ K+ K +LVA DVYRPAAIDQL +LGEQ+G+ VY+ E P +IA + A+
Sbjct: 120 ANYLQTKKNKKPLLVACDVYRPAAIDQLHVLGEQLGIEVYSNKEEKDPVKIATDAVIYAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K +VVIVDTAGRL +D+AMMDE+ VK+ +NPTE L VVD+MTGQ+A FN I
Sbjct: 180 SKGFNVVIVDTAGRLAVDEAMMDEIARVKKAINPTETLFVVDSMTGQDAVNTAKAFNDRI 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS+K + KPIK VG GE+M+ L+ FYP RMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIKSIVDKPIKFVGTGEKMDALDVFYPKRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QK+I FDFNDFL Q + + +MG++ ++GMIPGMGK
Sbjct: 300 VSLVERAQEQFNEEEARKLQKRIQKDQFDFNDFLGQIQQIKKMGNVKDLMGMIPGMGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP+ER P L+ + R+ R+A SG Q+V++L+ Q
Sbjct: 360 -KDVDIQDDAFKHIEAIIFSMTPKERANPSLM--NGTRKTRIANGSGTNIQEVNKLLKQF 416
Query: 503 FQMRVRMK 510
+ MK
Sbjct: 417 EDTKKMMK 424
>gi|383764739|ref|YP_005443721.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381385007|dbj|BAM01824.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 463
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/437 (49%), Positives = 310/437 (70%), Gaps = 11/437 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT L++ ++KL + L++ ++ MR++R ALLEADV+ VV+ FV+ V +AV
Sbjct: 1 MFESLTDKLQSIFDKLATKGKLSEADVNAAMREVRLALLEADVNYKVVKEFVERVKARAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VKIV +EL++L+G + + L + P VI+L GLQG GKTT++AKL
Sbjct: 61 GAEVMQSLTPAQQVVKIVHEELIELLG-KPAPLNTSGPPPHVIMLVGLQGAGKTTMAAKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKK G+ +LVA D+YRPAAI QL +LG Q+ VPVY+AGT+ S IAK L+ A++
Sbjct: 120 ALRLKKNGQRPLLVAADIYRPAAIKQLEVLGAQIEVPVYSAGTQTPASTIAKDALKLARE 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K +VVI+DTAGRLQID+A+M EL+ V+ V P+++LLVVDAMTGQEA + FN +
Sbjct: 180 KAYNVVIIDTAGRLQIDEALMQELEQVRLVTRPSDILLVVDAMTGQEAVNVAEGFNARVP 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG I+TK+DGD+RGGAALSV++V+G PIK +G GE++ DLEPF P+R+AGRILGMGDVL
Sbjct: 240 LTGLIMTKIDGDARGGAALSVRQVTGVPIKFLGTGEKLPDLEPFDPERLAGRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--- 440
+ +E+AQE + + A M+K+++ FDF DFL+Q + V R+G ++ ++ MIPG+ +
Sbjct: 300 TLIERAQENISADAAAAMEKRLVEGQFDFEDFLEQLKQVKRLGPLTEILSMIPGLNRFAK 359
Query: 441 -ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
I P A+ SLK EA+I +MT +ER P++L S RR+R+A SG T Q V+ LV
Sbjct: 360 EIDPTM---AQDSLKKTEAIINSMTIQERRNPDILNAS--RRRRIAAGSGTTVQDVNTLV 414
Query: 500 AQLFQMRVRMKNLMGVM 516
Q +M+ MK L GVM
Sbjct: 415 KQFREMQKMMKQL-GVM 430
>gi|15615047|ref|NP_243350.1| signal recognition particle [Bacillus halodurans C-125]
gi|10175104|dbj|BAB06203.1| signal recognition particle [Bacillus halodurans C-125]
Length = 451
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/432 (46%), Positives = 308/432 (71%), Gaps = 8/432 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ ++++++ E MR++R ALLEADV+ VV++F+ V E+A+G
Sbjct: 3 FESLAERLQDTLKKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKQFIANVKEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V +EL LMGGE S++ A PTV+++ GLQG GKTT +AKLA
Sbjct: 63 QEVMKSLTPGQQVIKVVNEELTALMGGEQSKIAVASKPPTVVMMVGLQGAGKTTTTAKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KK ++ +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E AK+
Sbjct: 123 NHLRKKHNRNPILVAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAKQAIERAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +MDEL+ VK V P E+LLVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHHDYVLIDTAGRLHIDEELMDELQQVKEVAKPDEILLVVDAMTGQDAVNVAESFHEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G +LTKLDGD+RGGAALSVK V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VSGVVLTKLDGDTRGGAALSVKAVTNTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--- 440
+ +EKAQ + +E A E++KK+ + +F F+DFL+Q V MG + ++GM+PGM K
Sbjct: 303 TLIEKAQSTVDEEKARELEKKMRTMDFTFDDFLEQLDQVRSMGPLDELLGMMPGMNKAKG 362
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ QV EK + +EA++ +MT +E++ P ++ S RR+R+A+ SG Q V++L+
Sbjct: 363 LKNLQVD--EKQISRVEAIVRSMTKQEKQDPSIINAS--RRRRIAKGSGTAIQDVNRLLK 418
Query: 501 QLFQMRVRMKNL 512
Q +M+ MK +
Sbjct: 419 QFEEMKKMMKQM 430
>gi|220928159|ref|YP_002505068.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
gi|219998487|gb|ACL75088.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
Length = 448
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 297/421 (70%), Gaps = 2/421 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ K++G+ ++++++ + MR+I+ ALLEADV+ VV+ F+ +SE+AV
Sbjct: 3 VFEGLSGKLQDTIKKIRGQGRVSEKDVKDMMREIKLALLEADVNFKVVKEFISKISERAV 62
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ+VKIV +EL++L+G E S++ FA PTV ++AGLQG GKTT + KL
Sbjct: 63 GADVLESLTPGQQVVKIVHEELIELLGREQSKVTFAPKPPTVFMMAGLQGAGKTTTAGKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQGK+ +LVA DVYRPAAI QL +LG Q+ +PV+T P QIAK+ ++ A+
Sbjct: 123 ANLLRKQGKNPLLVACDVYRPAAIKQLQVLGNQLNIPVFTLENNQNPVQIAKEAVKFAEM 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D+VI+DTAGRL ID+ +MDEL ++K + P E+LLVVD+MTGQ+A + TFN ++G
Sbjct: 183 KQNDLVILDTAGRLHIDEKLMDELLNIKNTVKPHEILLVVDSMTGQDAVNVSKTFNEKLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALSVK V+GKPIK GE++ D+EPF+PDRMA RILGMGDVL
Sbjct: 243 IDGVVLTKLDGDTRGGAALSVKSVTGKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE ++ A E++KK+ + F DFL Q + + +MG + ++GM+PG+
Sbjct: 303 SLIEKAQEAYDEKKAIELEKKMRTMTFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKAL 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK + EA+I++MT +ER P ++ S RRKR++ SG T Q+V+ L+ Q
Sbjct: 363 KDIDIDEKQMGRTEAIIQSMTRKERLDPSIINGS--RRKRISAGSGTTIQEVNALLKQFE 420
Query: 504 Q 504
Q
Sbjct: 421 Q 421
>gi|229495294|ref|ZP_04389029.1| signal recognition particle protein [Porphyromonas endodontalis
ATCC 35406]
gi|229317737|gb|EEN83635.1| signal recognition particle protein [Porphyromonas endodontalis
ATCC 35406]
Length = 442
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/440 (49%), Positives = 297/440 (67%), Gaps = 8/440 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V ++F V E A+
Sbjct: 1 MFENLSERLERSFKNLKGEGRITEINVAETLKDVRRALLDADVNYNVAKKFTDTVKETAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ VRP + +VKIV DEL +LMGGE EL S P V+L++GLQG GKTT S KL
Sbjct: 61 GRNVLTAVRPSEMMVKIVHDELARLMGGEAVELRLQGS-PAVVLMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK Q K+ +LVA DVYRPAAIDQL +LGEQ+ +PVY KP QIA++G+ A+
Sbjct: 120 AKLLKTQRHKNPLLVACDVYRPAAIDQLKVLGEQLNIPVYAEEDNKKPVQIAERGITYAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVIVDTAGRL +D+ MM E+ +K +NP EVL VVD+MTGQ+A FN +
Sbjct: 180 EHGHDVVIVDTAGRLAVDEEMMQEIAAIKAAINPDEVLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE M+ L+ F+P+RMA RILGMGD+
Sbjct: 240 DFGGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEGMDALDVFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ +++A ++++I FDFNDFLKQ + +MG++ ++ MIPG+GK
Sbjct: 300 VSLVERAQQQYDEQEARRLEQRIAKDQFDFNDFLKQIHQIKKMGNIRDLVSMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P LL + RRKR+A+ SG T Q V++L+ Q
Sbjct: 360 -KDIDIDDDAFKGIEAIIYSMTPEERAHPSLL--NGQRRKRIAKGSGTTVQDVNKLITQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLP 522
Q R MK + + GS P
Sbjct: 417 DQARKMMKTVQAM---GSNP 433
>gi|223043736|ref|ZP_03613779.1| signal recognition particle protein [Staphylococcus capitis SK14]
gi|417907136|ref|ZP_12550912.1| signal recognition particle protein [Staphylococcus capitis VCU116]
gi|222442833|gb|EEE48935.1| signal recognition particle protein [Staphylococcus capitis SK14]
gi|341596767|gb|EGS39358.1| signal recognition particle protein [Staphylococcus capitis VCU116]
Length = 455
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 311/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V+P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVQPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRDSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|289550983|ref|YP_003471887.1| signal recognition particle, subunit Ffh SRP54 [Staphylococcus
lugdunensis HKU09-01]
gi|315658478|ref|ZP_07911350.1| signal recognition particle protein [Staphylococcus lugdunensis
M23590]
gi|385784604|ref|YP_005760777.1| signal recognition particle protein [Staphylococcus lugdunensis
N920143]
gi|289180515|gb|ADC87760.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
lugdunensis HKU09-01]
gi|315496807|gb|EFU85130.1| signal recognition particle protein [Staphylococcus lugdunensis
M23590]
gi|339894860|emb|CCB54157.1| signal recognition particle protein [Staphylococcus lugdunensis
N920143]
Length = 455
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV++F+ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKQFINTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTTIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVAGD+YRPAAIDQL +G+Q+ VPVY+ G +VKP QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAGDIYRPAAIDQLQTVGKQLDVPVYSEGDQVKPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P EV+LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKAISKPDEVMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+M+ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKMDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F DFL Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRDSSFTLEDFLDQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K + ++A+I++MTP ER P L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 MNKLNMDDKQIDHIKAIIQSMTPMERANPATLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|373495378|ref|ZP_09585963.1| signal recognition particle protein [Eubacterium infirmum F0142]
gi|371964856|gb|EHO82360.1| signal recognition particle protein [Eubacterium infirmum F0142]
Length = 447
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 301/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++KLKG+ +T+ +I MR+++ ALLEADV+ VV+ FV V E+ +G
Sbjct: 3 FESLSDKLQNAFSKLKGKGVITESDINAAMREVKLALLEADVNFKVVKEFVAIVKEKCLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV EL+ LMGG S+L ++ S TV+++ GLQG GKTT KLA
Sbjct: 63 AEVLKSLTPAQQIIKIVNSELIDLMGGAGSKLTYSPSGFTVLMMVGLQGTGKTTTCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
++LK+ GK MLVA D+YRPAAIDQL ++G+ V PV+T QIA E+A++K
Sbjct: 123 SFLKQNGKKPMLVACDIYRPAAIDQLEVVGKAVNTPVFTMRESKDAVQIALAAKEDAERK 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
DV+I+DTAGRLQID+++M+EL +K + P E+LLVVDA+TGQ+A FN ++GI
Sbjct: 183 GFDVLIIDTAGRLQIDESLMEELASMKSAVRPHEILLVVDALTGQDAVNAADGFNRKLGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G I+TK+DGDSRGGAALS K+V+GKPIK +G GE+ + LEPF+P+R+A RILGMGD+LS
Sbjct: 243 DGIIMTKMDGDSRGGAALSAKKVTGKPIKFLGTGEKSDALEPFHPERLASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKA++ +E AE++++KI F DFL+Q V +MG +++++ M+PGMG KI+
Sbjct: 303 LIEKAEQAYDEEQAEKLERKIRKNQFTLEDFLEQMGQVRKMGGLAKIMDMLPGMGGAKIS 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A + + EK + MEA+I +MT ER+ P LL S RRKR+A SG+T V++++++
Sbjct: 363 EADIEKGEKEFRTMEAIIRSMTVAERKNPGLLNAS--RRKRIAAGSGQTVNSVNKVISKY 420
Query: 503 FQMRVRMKNL 512
+ + MK
Sbjct: 421 EESKKLMKQF 430
>gi|377809757|ref|YP_005004978.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
gi|361056498|gb|AEV95302.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
Length = 476
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/446 (48%), Positives = 302/446 (67%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ +N L+ + +T+ ++ + MR+IR ALLEADV+ VV++FV+ V +QAVG
Sbjct: 3 FEGLTERLQKTFNNLRRKGKVTEADLRDTMREIRLALLEADVNFQVVKQFVKTVRDQAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ++K+V DELVK MG E + L + PT+I++ GLQG GKTT + KLA
Sbjct: 63 SDVLDGLNPAQQIIKLVNDELVKTMGSEDAPLNKSDHIPTIIMMTGLQGAGKTTTTGKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +L+A DVYRPAA+DQLV +G+++ VPVY GT P I K+GLE A++
Sbjct: 123 LKLKNEQNARPLLIAADVYRPAAVDQLVQVGQRIDVPVYEEGTSANPVDIVKRGLEVARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V +DTAGRLQID+A+M EL D+K + +P E+LLVVDAMTGQ A FN ++
Sbjct: 183 NHNDYVFIDTAGRLQIDEALMQELADIKALAHPDEILLVVDAMTGQNAVNTAEGFNEKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIKLVG+GE+MEDL+ F+PDRMA RILGMGD+L
Sbjct: 243 ITGIVLTKLDGDTRGGAALSIRAVTGKPIKLVGQGEKMEDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EK Q + ++ A EM KI FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKTQRDVDEKQAAEMADKIRENTFDFNDFVDQLVQVQNMGPMEDIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++ +A+I +MT ERE P++L +P RR+R+A SG+ +V++++ Q
Sbjct: 362 AMKNMNVNPKDIEHTKAIIYSMTAAEREDPDIL--NPSRRRRIAAGSGQPVVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M M G+ + +
Sbjct: 420 FNQ----MKKMMNQMSKGNFNGMEGM 441
>gi|291278684|ref|YP_003495519.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
gi|290753386|dbj|BAI79763.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
Length = 447
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/421 (47%), Positives = 295/421 (70%), Gaps = 6/421 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L A + K+KG+ +T++NI + ++ +R ALLEADV+ VV++F+ AV E+A+
Sbjct: 1 MFATLHDKLNAVFKKIKGQAKITEDNIKDAVKQVRLALLEADVNYKVVKKFISAVQEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGE--VSELVFAKSRPTVILLAGLQGVGKTTVSA 201
G +++ + PDQ +KIV DELV ++GG+ +++ PT I+L GLQG GKTT +
Sbjct: 61 GEEVLKSLTPDQVFIKIVHDELVNVLGGDDQSTKIKLNPIPPTKIMLVGLQGSGKTTTAG 120
Query: 202 KLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
KLA Y +K GK +LVA D+YRPAAIDQL ILG+Q+ V V++ E +IAK+ ++ A
Sbjct: 121 KLAKYFQKNGKDVLLVADDIYRPAAIDQLEILGKQLKVDVFSKRDEQDAVKIAKEAVQHA 180
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
K DVVI+DTAGRL ID+ +M+ELK++K +NP E+L V DAMTGQ+A + TFN
Sbjct: 181 KSAAKDVVIIDTAGRLHIDETLMEELKNIKEAINPDEILFVADAMTGQDAVNVAKTFNEM 240
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+ ITG ILTKLDGD+RGGAALS++EV+GKP+K VG GE+++ EPFYPDRMA RILGMGD
Sbjct: 241 LDITGVILTKLDGDARGGAALSIREVTGKPLKFVGTGEKLDAFEPFYPDRMASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
+++ VE AQ+ +++++AE++ KI DFND L+Q + + +MGS ++ ++PG +
Sbjct: 301 IVTLVEMAQDAIEEDEAEKLATKIQKKGLDFNDMLQQMKMIKKMGSFESILKLLPGFSGL 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V E+ + K +EA+I +MTP ER ++L S R++R+A+ SG + +V++L+ Q
Sbjct: 361 GNIDVDES--NFKRIEAIINSMTPLERTNYKILNAS--RKRRIAKGSGTSVSEVNKLIQQ 416
Query: 502 L 502
L
Sbjct: 417 L 417
>gi|429749336|ref|ZP_19282465.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429168518|gb|EKY10348.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 442
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/420 (49%), Positives = 293/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNTVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ + + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GQQVLTTLQPGQLMVKIVKDELTQLMGGDAAGVNLS-GNPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSC-MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK + +LVA DVYRPAAIDQL I+G+QVGVPV++ P IA +G++ AK
Sbjct: 120 ANYLKNKKNKKPLLVACDVYRPAAIDQLHIVGDQVGVPVFSDKGNNNPVDIALKGVQYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+++VVIVDTAGRL +D+ MM+E+ ++ + + P E L VVDAMTGQ+A FN +
Sbjct: 180 DNHLNVVIVDTAGRLAVDEQMMNEISNIHQAIKPHETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+++K V KPIK VG GE+ME ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMEAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL+Q + + RMGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 360 K-DLDIKDDAFKHIEAIIHSMTPKERSNPAIIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|333377126|ref|ZP_08468862.1| signal recognition particle protein [Dysgonomonas mossii DSM 22836]
gi|332886339|gb|EGK06583.1| signal recognition particle protein [Dysgonomonas mossii DSM 22836]
Length = 439
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/442 (49%), Positives = 304/442 (68%), Gaps = 6/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L++ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ ++F + V E+A+
Sbjct: 1 MFESLSNRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKTAKQFTETVKEKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P+Q +VKIV DEL LMGG ++ V K P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPEQLMVKIVHDELAALMGGTATD-VHLKGNPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+GK+ +LVAGDVYRPAAI+QL ILGEQ+ VPVY P QIA+ ++ AK
Sbjct: 120 AKMLKSKKGKNPLLVAGDVYRPAAIEQLKILGEQIEVPVYWEEGSKNPVQIAQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ D+VIVDTAGRL ID+ MM E+ +K + P E+L VVD+MTGQ+A FN +
Sbjct: 180 QNGNDLVIVDTAGRLAIDEEMMKEITAIKDAVKPDEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+M+ L+ F+P+RMA RILGMGD+
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIRSVVDKPIKFVGTGEKMDALDVFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDF+ Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEARRLQKKIAKNQFDFNDFIGQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER PE+L S RR+R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DMDIDDDAFKSIEAIIYSMTPKERSTPEILNGS--RRERIAKGSGTSIQEVNKLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + M+GG +P +
Sbjct: 417 DQTRKMMKMMT-QMKGGKMPNM 437
>gi|253681736|ref|ZP_04862533.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
gi|253561448|gb|EES90900.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
Length = 451
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/417 (48%), Positives = 297/417 (71%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ KL+G+ L++++I E MR+++ ALLEADV+ +VR FV+ E+ +G
Sbjct: 3 FEGLAEKLQDTLKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKIVRNFVKTTGEKCLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV DEL +LMG S++ F+ + TVI+L GLQG GKTT++ KLA
Sbjct: 63 EEVMKSLTPGQQVVKIVNDELKELMGSTESKIEFSSTGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA D+YRPAAI QL ++G Q+ +PV++ G +V P IAK +E AK
Sbjct: 123 LQLRKNNKKPLLVACDIYRPAAIKQLQVVGSQIDIPVFSMGDKVNPVDIAKASIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+A+MDEL+++K + P E+LLVVD+MTGQ+A + TFN ++ I
Sbjct: 183 KNNVVIIDTAGRLHIDEALMDELENIKTSVKPNEILLVVDSMTGQDAVNVSETFNDKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQE + +E A+E+ K+++ F+ DF + + +MG ++++I M+PG+ ++
Sbjct: 303 LIEKAQEAIDEEKAKELGDKMLNLEFNLEDFKESMAQMKKMGPLTKLIEMMPGVNSKQLQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + EK L +EAMI++MT +ER P +++ SP R++R+A SG QQV++L+
Sbjct: 363 GLDLSKGEKELTKIEAMIDSMTLKERRDPSVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|335357213|ref|ZP_08549083.1| Signal recognition particle protein [Lactobacillus animalis KCTC
3501]
Length = 475
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 306/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLE+DV+ VV+ FV+ V +AVG
Sbjct: 3 FEGLTERLQNAIGKLRRKGKVSESDVKEVMREIRLALLESDVNFKVVKDFVKTVRTRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +ELVK+MG E + L + PTVI++ GLQG GKTT + K+A
Sbjct: 63 AEVLESLTPAQQIVKIVNEELVKVMGEEATPLNKSPKIPTVIMMVGLQGAGKTTTAGKMA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +++A DVYRPAA+DQL +G ++ VPV+ GT+V P QI KQG+E AK+
Sbjct: 123 KRLKDEQNARPLMIAADVYRPAAVDQLKTIGRELDVPVFEMGTDVDPVQIVKQGMELAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRLQID+ +MDEL ++K + P E+LL VDAMTGQ A + FN ++
Sbjct: 183 KKNDYVIIDTAGRLQIDERLMDELVNIKELAQPNEILLTVDAMTGQNAVEVAQGFNDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M L+ FYPDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTALDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ K+ +FDFNDFL Q V MG + ++ MIPGM P
Sbjct: 303 TLIEKAQKDFDEKKAEELADKMRENSFDFNDFLDQLEQVQNMGPIEDIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ K ++ +A++ +MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q
Sbjct: 362 ALKNIKVDPKDMEHTKAIVYSMTPQEREDPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR ++M M G+ + L
Sbjct: 420 FKQMR----DMMQKMSKGNFSGMEGL 441
>gi|390953363|ref|YP_006417121.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
gi|390419349|gb|AFL80106.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
Length = 442
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/420 (49%), Positives = 292/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG ++T+ N+ E ++++RRALL+ADV+ + F +V E+A+
Sbjct: 1 MFDNLSDKLDKALHVLKGHGSITEVNVAETLKEVRRALLDADVNFKTAKEFTNSVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL +LMGGE + + + + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTSLQPGQLMVKLVKDELTELMGGETAGINLSGT-PSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA D+YRPAAI+QL ++G+Q+GV VY+ P IA+ + AK
Sbjct: 120 ANYLKTKKSKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVAIAQNAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVIVDTAGRL ID+AMM E+ DV + +NP E L VVDAMTGQ+A FN ++
Sbjct: 180 QNGFNVVIVDTAGRLAIDEAMMAEIADVHKAINPQETLFVVDAMTGQDAVNTAKAFNEKL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ F+P RMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAAISIKSVVDKPIKFIGTGEKMDAIDVFHPARMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFL Q + V +MGSM ++GMIPG GK
Sbjct: 300 VSLVERAQEQFDEEEARKIQKKIAKNQFGFDDFLSQIQQVKKMGSMKDLVGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP ER +P ++ S R+KR+A SG + QQV+QL+ Q
Sbjct: 360 K-DVDIDDDAFKGIEAIIHSMTPTERAQPAVIDGS--RKKRIASGSGTSVQQVNQLLKQF 416
>gi|363583065|ref|ZP_09315875.1| signal recognition particle protein [Flavobacteriaceae bacterium
HQM9]
Length = 442
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 292/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRAL++ADV+ + + F + V E+A+
Sbjct: 1 MFDNLSDKLDKALHVLKGHGQITEVNVAETLKEVRRALVDADVNYKIAKEFTKRVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ ++P Q +VK+V+DEL LMGG+ +E + P++IL++GLQG GKTT S KL
Sbjct: 61 GQDVLKSLKPGQLMVKLVKDELTDLMGGD-AEGINLSGTPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +LK K+ K +LVA DVYRPAAIDQL ++G+Q+G+ VY+ P +A+ G+ AK
Sbjct: 120 AQFLKNKKTKKPLLVACDVYRPAAIDQLHVVGDQIGIEVYSDKENNDPVALARAGVAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM+E+ ++ + +NP+E L VVD+MTGQ+A FN +
Sbjct: 180 ANGCNVVIVDTAGRLAVDEQMMNEISNIHKAINPSETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEAIDIFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE +E+A ++QKKI F F+DFL Q + + +MG++ ++GMIPGMGK+
Sbjct: 300 VSLVEKAQEQFDEEEARKLQKKIAKNQFGFDDFLSQIQQIKKMGNIKDLMGMIPGMGKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K +EA+I +MTPEER P+L+ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 360 KDV-DVDDDAFKHIEAIIHSMTPEERANPQLINAS--RKKRIGKGSGTSIQQVNQLLKQF 416
>gi|317502602|ref|ZP_07960723.1| signal recognition particle protein [Prevotella salivae DSM 15606]
gi|315666283|gb|EFV05829.1| signal recognition particle protein [Prevotella salivae DSM 15606]
Length = 449
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/450 (47%), Positives = 299/450 (66%), Gaps = 13/450 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGQITEINVAETLKDVRRALLDADVNFKVAKSFTDTVKQKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL LMGG+ ++ + P +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELADLMGGDTVDIQL-EGHPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI QL ++GEQ+GVPVY+ IA + EAK
Sbjct: 120 ANLLKNKRNKKPLLVACDVYRPAAIQQLKVVGEQIGVPVYSEPESKDVITIANNAVREAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM+E+ ++K L+P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDVVIVDTAGRLAVDEEMMNEIANLKNALHPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEAIDAFHPVRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEARRLQKKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDVDIDDNAFKGIEAIIKSMTPKERTNPEILNTS--RRQRIAKGSGTNIQEVNKLIKQF 416
Query: 503 FQMRVRMK--------NLMGVMEGGSLPAL 524
Q R MK ++M M+G +P +
Sbjct: 417 DQTRKMMKMVTGNQMASMMSRMKGMKMPGM 446
>gi|297584012|ref|YP_003699792.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
gi|297142469|gb|ADH99226.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
Length = 449
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/433 (46%), Positives = 312/433 (72%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+++ K+KG+ +++E++ E MR++R ALLEADV+ VV++FV V E+AVG
Sbjct: 3 FEGLSERLQSSIKKMKGKGKVSEEDVKEMMREVRLALLEADVNFKVVKKFVADVKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++K+V +EL +LMGGE S++ A PTV+++ GLQG GKTT + KLA
Sbjct: 63 QDVMESLTPGQQVIKVVNEELTRLMGGEQSKINTASKPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYL+K + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IA++ +E AK+
Sbjct: 123 NYLRKNHNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIARKAVEHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID +MDEL+ VK + P EVLLVVDAMTGQ+A + +FN ++
Sbjct: 183 EHHDYVLIDTAGRLHIDNELMDELQQVKAEVKPDEVLLVVDAMTGQDAVNVAESFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G +LTKLDGD+RGGAA+SVK V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LSGVVLTKLDGDTRGGAAISVKAVTDTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + ++ A E+++K+ + + F+DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 SLIEKAQTGVDEDKARELERKMRTNDLSFDDFLEQLAQVKEMGPLDEILNMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ +K L +EA++++MT ERE P ++ S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LKNVQVDDKQLAHIEAIVKSMTKYERENPSVMNAS--RKKRIAKGSGRSIQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGV 515
+M+ MK + G+
Sbjct: 421 EEMKKMMKQMTGM 433
>gi|408370475|ref|ZP_11168252.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
gi|407744233|gb|EKF55803.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
Length = 442
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/420 (49%), Positives = 290/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ NI E ++++RRALL+ADV+ + F +V +A+
Sbjct: 1 MFDNLSEKLDKAFHVLKGHGQITEVNIAETLKEVRRALLDADVNFKTAKEFTNSVKSKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL +LMGGE + + + P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLTSLKPGQLMVKLVKDELTELMGGEAAGVDLS-GNPSVILMAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K+ +LVA DVYRPAAIDQL ++GEQ+GV VY+ P IAK G++ AK
Sbjct: 120 ANFLKNKKTKNPLLVACDVYRPAAIDQLHVVGEQIGVSVYSDRENSDPVAIAKAGVDYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM E+ ++ +NP E L VVD+MTGQ+A +FN +
Sbjct: 180 ANGHNVVIVDTAGRLAVDELMMKEISNIHNAINPNETLFVVDSMTGQDAVNTAKSFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 DFDGVILTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMDAVDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++ KKI F F+DFL Q + + +MGSM ++GMIPG GK
Sbjct: 300 VSLVERAQEQYDEEEARKLHKKIAKDQFGFDDFLSQIQQIKKMGSMKDLLGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 360 KGMDID-DDAFKGIEAIIHSMTPEERSTPSVLNGS--RKKRIAKGSGTSVQEVNQLLKQF 416
>gi|268316589|ref|YP_003290308.1| signal recognition particle protein [Rhodothermus marinus DSM 4252]
gi|262334123|gb|ACY47920.1| signal recognition particle protein [Rhodothermus marinus DSM 4252]
Length = 450
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/448 (47%), Positives = 302/448 (67%), Gaps = 7/448 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LEAA + G+ +T+ NI MR+IRRALLEADV+ V R F + V E+A+
Sbjct: 1 MFESLTEKLEAALKSVSGQGRITELNIAGTMREIRRALLEADVNYQVAREFTERVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P QQLVKIV DELV+L+G E ++ + + PTVIL+AGLQG GKTT AKL
Sbjct: 61 GTKVLSSVSPGQQLVKIVYDELVRLLGSEQVDINLSPTPPTVILVAGLQGSGKTTFCAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTA---GTEVKPS-QIAKQGLE 259
A Y KK+G++ +L A DVYRPAA++QL L + VPVY+ G V+ + ++A++ ++
Sbjct: 121 ALYFKKKGRAPLLAAADVYRPAAVEQLKTLAASINVPVYSIEENGQVVQDAVRVAREAVQ 180
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN 319
EA++ D+VI+DTAGRL ID+AMM E++ +K + P E+L VVD+MTGQ+A FN
Sbjct: 181 EARRTARDIVIIDTAGRLHIDEAMMQEVEQIKEAVRPHEILFVVDSMTGQDAVNTAKAFN 240
Query: 320 IEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 379
+ G +LTKLDGD+RGGAALS++ V KPIK GE+++ L PFYPDRMA RILGM
Sbjct: 241 ERLDFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFASTGEKLDALTPFYPDRMAQRILGM 300
Query: 380 GDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG 439
GDV+S VE+AQE AE++++K+ SA+F+ DF +Q + + +MGS+ +IGMIPG+G
Sbjct: 301 GDVISLVERAQEQYDARQAEKLRRKLRSADFNLEDFYEQLQRIKKMGSLRELIGMIPGLG 360
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + + + K +EAMI +MTPEER P+++ S RR+R+A+ SG V+QL+
Sbjct: 361 RYVK-DLDVDDDAFKHIEAMILSMTPEERRNPDIIDAS--RRRRIARGSGMEVSDVNQLL 417
Query: 500 AQLFQMRVRMKNLMGVMEGGSLPALSNL 527
Q +MR MK++ +M G L L
Sbjct: 418 RQFKEMRKMMKSMSKLMGKGRAVDLRQL 445
>gi|228928893|ref|ZP_04091925.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830700|gb|EEM76305.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 449
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAIANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|255313924|ref|ZP_05355507.1| signal recognition particle protein [Clostridium difficile
QCD-76w55]
gi|255516603|ref|ZP_05384279.1| signal recognition particle protein [Clostridium difficile
QCD-97b34]
gi|255649703|ref|ZP_05396605.1| signal recognition particle protein [Clostridium difficile
QCD-37x79]
gi|260686457|ref|YP_003217590.1| signal recognition particle protein [Clostridium difficile R20291]
gi|384360448|ref|YP_006198300.1| signal recognition particle protein [Clostridium difficile BI1]
gi|260212473|emb|CBE03380.1| signal recognition particle protein [Clostridium difficile R20291]
Length = 450
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 298/433 (68%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT+ ++ MR+++ ALLEADV+ VV+ F++ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q ++KIV +EL LMG S+++ + PT++++ GLQG GKTT + KL
Sbjct: 62 GQEVMQSLTPAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA D+YRPAAI QL ++GE++ +PV+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDIYRPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +M ELK +K + P E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 NANDLVIIDTAGRLHIDEVLMAELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVL
Sbjct: 242 VDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + E A+E+++KI DF DFL+Q + MG + +++GMIPGMG +
Sbjct: 302 SLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKD 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K +K +A+I++MT ER P +L S R+KR+A+ SG + Q V++L+ Q
Sbjct: 362 QLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMG 514
L +M+ MK G
Sbjct: 420 LNEMKKMMKMFAG 432
>gi|222097290|ref|YP_002531347.1| signal recognition particle protein [Bacillus cereus Q1]
gi|221241348|gb|ACM14058.1| signal recognition particle protein [Bacillus cereus Q1]
Length = 449
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAQVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|373500244|ref|ZP_09590631.1| signal recognition particle protein [Prevotella micans F0438]
gi|371954375|gb|EHO72188.1| signal recognition particle protein [Prevotella micans F0438]
Length = 444
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/448 (48%), Positives = 305/448 (68%), Gaps = 11/448 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDNVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGGE L +P VIL++GLQG GKTT S KL
Sbjct: 61 GMDVLTAVKPGQLMVKIVHDELAELMGGEAVGLKL-DGKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +LKK + K+ MLVA DVYRPAAI+QL ++G+QV V VY+ K ++IA+ ++EAK
Sbjct: 120 AQFLKKKEHKNPMLVACDVYRPAAIEQLKVVGQQVNVSVYSEPENKKVNEIAENAIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VI+DTAGRL +D+ MM+E++ +K ++P E L VVD+MTGQ+A FN +
Sbjct: 180 VKGNDLVIIDTAGRLAVDEEMMNEIESLKNHIHPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME L+ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFVGTGEKMEALDTFHPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+++QKKI FDFNDF KQ + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKKLQKKIQKNQFDFNDFYKQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + S K +EA+I++MTP+ER PELL S RR+R+A+ SG +V++L+ Q
Sbjct: 360 -RDVDIDDNSFKSVEAIIQSMTPKERTNPELLNTS--RRQRIAKGSGTNILEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGV-MEG-----GSLPAL 524
Q R MK + G M G G +P L
Sbjct: 417 DQTRKMMKMVTGSRMSGMVGRMGGMPKL 444
>gi|229098314|ref|ZP_04229261.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|229104407|ref|ZP_04235076.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|229117331|ref|ZP_04246709.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|407706304|ref|YP_006829889.1| hypothetical protein MC28_3068 [Bacillus thuringiensis MC28]
gi|423378316|ref|ZP_17355600.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|423441424|ref|ZP_17418330.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|423448350|ref|ZP_17425229.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|423464498|ref|ZP_17441266.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|423533840|ref|ZP_17510258.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|423540891|ref|ZP_17517282.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|423547129|ref|ZP_17523487.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|423615894|ref|ZP_17591728.1| signal recognition particle protein [Bacillus cereus VD115]
gi|423623079|ref|ZP_17598857.1| signal recognition particle protein [Bacillus cereus VD148]
gi|228666231|gb|EEL21695.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|228679105|gb|EEL33313.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|228685212|gb|EEL39143.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|401128944|gb|EJQ36627.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|401172079|gb|EJQ79300.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|401178850|gb|EJQ86023.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|401259852|gb|EJR66026.1| signal recognition particle protein [Bacillus cereus VD148]
gi|401260431|gb|EJR66604.1| signal recognition particle protein [Bacillus cereus VD115]
gi|401636582|gb|EJS54336.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|402418085|gb|EJV50385.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|402420765|gb|EJV53036.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|402464059|gb|EJV95759.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|407383989|gb|AFU14490.1| Signal recognition particle protein [Bacillus thuringiensis MC28]
Length = 449
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/432 (47%), Positives = 308/432 (71%), Gaps = 8/432 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V NP E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVANPDEIFLVVDAMTGQDAVNVAQSFHDQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNL 512
Q M+ MK +
Sbjct: 419 QFDDMKKMMKTM 430
>gi|78188776|ref|YP_379114.1| Signal recognition particle protein [Chlorobium chlorochromatii
CaD3]
gi|78170975|gb|ABB28071.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
chlorochromatii CaD3]
Length = 451
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/428 (51%), Positives = 293/428 (68%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEA + KL G+ T+ + NI MRDI+RALL ADV+ V ++ ++ + E+++
Sbjct: 3 MFESLSDKLEATFKKLAGQATINEINIGVAMRDIKRALLAADVNYKVAKKLIEDIREKSL 62
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAK 202
G +I+ V P Q +VKIV DEL +LMGGE L + K P +I++AGLQG GKTT AK
Sbjct: 63 GEEVIKSVSPAQMIVKIVYDELTELMGGEQKPLNLSPKKLPAIIMVAGLQGSGKTTFCAK 122
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LA L+K GK+ ML+A DVYRPAA+DQL LGEQV VPV++ E + A QGLE AK
Sbjct: 123 LALRLRKNGKNPMLIAADVYRPAAVDQLKALGEQVEVPVFSV-DEKDAMKAALQGLEAAK 181
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVIVDTAGRLQID+AMM E + +K L P E+L VVD+M GQEA FN +
Sbjct: 182 AAAKDVVIVDTAGRLQIDQAMMAEAEALKNALKPDELLFVVDSMMGQEAVNTAKAFNDRL 241
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS+++V KPIK + GE+++DL+ FYPDRMA RILGMGD+
Sbjct: 242 DFDGVVLTKLDGDARGGAALSIRQVVEKPIKFISIGEKVDDLDIFYPDRMAQRILGMGDI 301
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+SFVEKAQE + + A EMQKK+M FD NDF Q + + +MGS+ +I M+PG+ K+
Sbjct: 302 ISFVEKAQENLDLDKAIEMQKKLMKNEFDLNDFFDQLQQLKKMGSIQGLIEMVPGLNKMV 361
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
P Q E K +EAMI +MT EER PE++ S RR+R+A+ SG+ Q+V+ L+ Q
Sbjct: 362 PKQELE-NLDFKPIEAMISSMTKEERSNPEMINGS--RRQRIARGSGRKVQEVNLLLKQF 418
Query: 503 FQMRVRMK 510
+M+ MK
Sbjct: 419 GEMKKMMK 426
>gi|372222922|ref|ZP_09501343.1| signal recognition particle protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 442
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/420 (48%), Positives = 287/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V ++A+
Sbjct: 1 MFDNLSEKLDKALHNLKGHGKITEINVAETLKEVRRALLDADVNFKIAKEFTNTVKDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ +E V P+VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLSTLQPGQLMVKIVKDELTQLMGGD-AEGVDLSGNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAIDQL ++GEQ+GV VY+ P IA+ G+ AK
Sbjct: 120 ANFLKNKKTKKPLLVACDVYRPAAIDQLHVVGEQIGVEVYSDRGNTDPVAIAQAGIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVI+DTAGRL +D+ MMDE+ ++ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 TLGCNVVIIDTAGRLAVDQEMMDEISNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL Q + + +MG+M ++GMIPGMGK
Sbjct: 300 VSLVERAQEQFDEEQARKIQKKIAKNKFGFDDFLSQIQQIKKMGNMKDLMGMIPGMGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P L S R+KR+A SG++ Q V+QL+ Q
Sbjct: 360 KG-IDIDDDAFKHIEAIIHSMTPDERANPNKLNSS--RKKRIAAGSGRSVQDVNQLLKQF 416
>gi|42782937|ref|NP_980184.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49478411|ref|YP_037906.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141643|ref|YP_085186.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118479067|ref|YP_896218.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217961265|ref|YP_002339833.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218904975|ref|YP_002452809.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225865826|ref|YP_002751204.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228916482|ref|ZP_04080048.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935159|ref|ZP_04097986.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947564|ref|ZP_04109854.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228986988|ref|ZP_04147114.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229092887|ref|ZP_04224021.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|229123359|ref|ZP_04252563.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|229157421|ref|ZP_04285499.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|229186085|ref|ZP_04313254.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|229197955|ref|ZP_04324670.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|301055335|ref|YP_003793546.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|375285768|ref|YP_005106207.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|376267740|ref|YP_005120452.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|384181658|ref|YP_005567420.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402556034|ref|YP_006597305.1| signal recognition particle protein [Bacillus cereus FRI-35]
gi|423353547|ref|ZP_17331174.1| signal recognition particle protein [Bacillus cereus IS075]
gi|423374358|ref|ZP_17351696.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|423550406|ref|ZP_17526733.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|423567260|ref|ZP_17543507.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|423574549|ref|ZP_17550668.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|423604528|ref|ZP_17580421.1| signal recognition particle protein [Bacillus cereus VD102]
gi|42738864|gb|AAS42792.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49329967|gb|AAT60613.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975112|gb|AAU16662.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118418292|gb|ABK86711.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217066657|gb|ACJ80907.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218538723|gb|ACK91121.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225787793|gb|ACO28010.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228585534|gb|EEK43637.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|228597261|gb|EEK54912.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|228626148|gb|EEK82897.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|228660135|gb|EEL15771.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|228690509|gb|EEL44292.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|228772766|gb|EEM21206.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228812084|gb|EEM58415.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824524|gb|EEM70329.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843061|gb|EEM88143.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300377504|gb|ADK06408.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|324327742|gb|ADY23002.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358354295|dbj|BAL19467.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|364513540|gb|AEW56939.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|401089360|gb|EJP97531.1| signal recognition particle protein [Bacillus cereus IS075]
gi|401094270|gb|EJQ02352.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|401190022|gb|EJQ97072.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|401212074|gb|EJR18820.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|401214348|gb|EJR21078.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|401245148|gb|EJR51506.1| signal recognition particle protein [Bacillus cereus VD102]
gi|401797244|gb|AFQ11103.1| signal recognition particle protein [Bacillus cereus FRI-35]
Length = 449
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|410667373|ref|YP_006919744.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
gi|409105120|gb|AFV11245.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
Length = 451
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 297/438 (67%), Gaps = 5/438 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KL+G+ LT+ ++ +R++R ALLEADV+L VV+ F+ V E+++
Sbjct: 2 LFQGLAEKLQETFKKLRGKGKLTENDLKAALREVRLALLEADVNLAVVKNFIGRVWERSL 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV++EL LMG S + F+ + PT ILL GLQG GKTT + KL
Sbjct: 62 GAEVLESLTPAQQIIKIVKEELTALMGDTRSGINFSATGPTTILLVGLQGGGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A Y KKQGK +LV DVYRPAAI QL +L Q+ VP ++ G + P +IA++ +E A++
Sbjct: 122 ALYYKKQGKRPLLVGADVYRPAAIKQLEVLAGQIDVPFFSLGADASPVEIARRAVEHAQR 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D+++VDTAGRL ID+ +M EL+ +K + P EV+LVVDAMTGQ+A + F E+G
Sbjct: 182 QSQDLILVDTAGRLHIDEELMAELRSMKEAVEPQEVILVVDAMTGQDAVNVARAFQEELG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALSVK V+G PIK VG GE+++ L+PFYPDRMA RILGMGDVL
Sbjct: 242 LTGVILTKLDGDTRGGAALSVKSVTGCPIKFVGTGEKLDTLQPFYPDRMAARILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---K 440
S +E+AQ QE A E++KK+ F DFL+Q V MGS+ +++GM+PG+G +
Sbjct: 302 SLIERAQSTFDQEKAREIEKKLRRQEFTLEDFLEQIERVRSMGSLEQLLGMLPGVGGAKE 361
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ Q + K +EAMI +MTPEER P ++ S RRKR+A+ SG + Q V++L+
Sbjct: 362 LRKLQAQFDGKEFVRLEAMINSMTPEERRNPAIINGS--RRKRIARGSGTSVQDVNRLLK 419
Query: 501 QLFQMRVRMKNLMGVMEG 518
Q R K L V G
Sbjct: 420 HFEQTRKLFKQLSEVGSG 437
>gi|345303700|ref|YP_004825602.1| signal recognition particle protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345112933|gb|AEN73765.1| signal recognition particle protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 450
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/448 (47%), Positives = 302/448 (67%), Gaps = 7/448 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LEAA + G+ +T+ NI MR+IRRALLEADV+ V R F + V E+A+
Sbjct: 1 MFESLTEKLEAALKSVSGQGRITELNIAGTMREIRRALLEADVNYQVAREFTERVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P QQLVKIV DELV+L+G E ++ + + PTVIL+AGLQG GKTT AKL
Sbjct: 61 GTKVLTSVSPGQQLVKIVYDELVRLLGSEQVDINLSPTPPTVILVAGLQGSGKTTFCAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTA---GTEVKPS-QIAKQGLE 259
A Y KK+G++ +L A DVYRPAA++QL L + VPVY+ G V+ + ++A++ ++
Sbjct: 121 ALYFKKKGRAPLLAAADVYRPAAVEQLKTLAASINVPVYSIEENGQVVQDAVRVAREAVQ 180
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN 319
EA++ D+VI+DTAGRL ID+AMM E++ +K + P E+L VVD+MTGQ+A FN
Sbjct: 181 EARRTARDLVIIDTAGRLHIDEAMMQEVEQIKEAVRPHEILFVVDSMTGQDAVNTAKAFN 240
Query: 320 IEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 379
+ G +LTKLDGD+RGGAALS++ V KPIK GE+++ L PFYPDRMA RILGM
Sbjct: 241 ERLDFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFASTGEKLDALTPFYPDRMAQRILGM 300
Query: 380 GDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG 439
GDV+S VE+AQE AE++++K+ +A+FD DF +Q + + +MGS+ +IGMIPG+G
Sbjct: 301 GDVISLVERAQEQYDARQAEKLRRKLRTADFDLEDFYEQLQRIKKMGSLRELIGMIPGLG 360
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + + + K +EAMI +MTPEER P+++ S RR+R+A+ SG V+QL+
Sbjct: 361 RYVK-DLDVDDDAFKHIEAMILSMTPEERRNPDIIDAS--RRRRIARGSGMEVSDVNQLL 417
Query: 500 AQLFQMRVRMKNLMGVMEGGSLPALSNL 527
Q +MR MK++ +M G L L
Sbjct: 418 RQFKEMRKMMKSMSKLMGKGRAVDLRQL 445
>gi|1850607|gb|AAB48050.1|AAB48050 Ffh [Streptococcus mutans]
Length = 516
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 304/439 (69%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL ILG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKILGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MGSM ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVEVDEGEIARK--RAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 418 KDFNQAK---KMMQGVMSG 433
>gi|376261083|ref|YP_005147803.1| signal recognition particle protein [Clostridium sp. BNL1100]
gi|373945077|gb|AEY65998.1| signal recognition particle protein [Clostridium sp. BNL1100]
Length = 448
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 296/421 (70%), Gaps = 2/421 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ K++G+ ++++++ + MR+I+ ALLEADV+ VV+ F+ VSE+AV
Sbjct: 3 VFEGLSGKLQETIKKIRGQGRVSEKDVKDMMREIKLALLEADVNFKVVKEFISKVSERAV 62
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ+VKIV +EL++L+G E S++ FA PT+ ++AGLQG GKTT + KL
Sbjct: 63 GSDVLESLTPGQQVVKIVHEELIELLGREQSKVTFAPKPPTIFMMAGLQGAGKTTTAGKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQGK+ +LVA DVYRPAAI QL +LG Q+ +PV+T P QIAK+ + A+
Sbjct: 123 ANLLRKQGKNPLLVACDVYRPAAIKQLQVLGNQLNIPVFTLENNQNPVQIAKEAVSFAEM 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D+VI+DTAGRL ID+ +MDEL ++K + P E+LLVVD+MTGQ+A + TFN ++G
Sbjct: 183 KQHDLVIIDTAGRLHIDEKLMDELLNIKNSVKPHEILLVVDSMTGQDAVNVSETFNEKLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALSVK V+GKPIK GE++ D+EPF+PDRMA RILGMGDVL
Sbjct: 243 IDGVVLTKLDGDTRGGAALSVKSVTGKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE ++ A E++KK+ + F DFL Q + + +MG + ++GM+PG+
Sbjct: 303 SLIEKAQEAYDEKKAIELEKKMRTMTFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKAL 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ EK + EA+I++MT +ER P ++ S RRKR++ SG T Q+V+ L+ Q
Sbjct: 363 KDIDIDEKQMGRTEAIIQSMTRKERLDPSIINGS--RRKRISAGSGTTIQEVNALLKQFE 420
Query: 504 Q 504
Q
Sbjct: 421 Q 421
>gi|404287230|ref|YP_006693816.1| signal recognition particle protein [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|404246159|emb|CBY04384.1| signal recognition particle protein [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 467
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 GEMKKMMKQM 430
>gi|342732348|ref|YP_004771187.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455751|ref|YP_005668346.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417962271|ref|ZP_12604520.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|417962397|ref|ZP_12604607.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|417965566|ref|ZP_12607074.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968297|ref|ZP_12609330.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|418016250|ref|ZP_12655815.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372604|ref|ZP_12964696.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329803|dbj|BAK56445.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506585|gb|EGX28879.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984094|dbj|BAK79770.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330716|gb|EIA21901.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|380336378|gb|EIA26396.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|380337762|gb|EIA26772.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|380339962|gb|EIA28617.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|380342273|gb|EIA30718.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 454
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/435 (45%), Positives = 308/435 (70%), Gaps = 4/435 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ + KL+G+ L++++I MR+++ ALLE+DV+ VV+ F+ +VSE+++G
Sbjct: 3 FDGLASKLQGVFKKLRGKGKLSEQDIKLAMREVKLALLESDVNYRVVKTFISSVSEKSLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL +MG + S+L + + T+I+L GLQG GKTT++AKL+
Sbjct: 63 KEVLESLTPAQQVIKIVNDELKAIMGNDQSKLNYNVNGTTIIMLVGLQGAGKTTMAAKLS 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
Y +K GK+ +++A DVYRPAA+ QL +LG Q+ +PV++ P I K+GLEEA+K
Sbjct: 123 LYCRKSGKTPLMIACDVYRPAAVKQLEVLGNQINIPVFSIPDSKDPLYIVKKGLEEAEKN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID A+M+ELK++K + +P+E+L+V+D+M GQE+ + TFN ++ +
Sbjct: 183 MNNVVIIDTAGRLHIDDALMNELKEIKELSDPSEILMVIDSMIGQESVNIAETFNDKLDV 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGG ALS+KEV GK IK +G GE++ DLE F+PDRMA RILGMGDVLS
Sbjct: 243 TGFVLTKLDGDTRGGVALSIKEVIGKNIKFIGVGEKIGDLEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----K 440
+EKAQE + Q++A+++ +++++ F+F DF + + ++GS S+++ MIPG G +
Sbjct: 303 LIEKAQEAIDQDEAQKLSERMLANEFNFEDFKSAMQQMKKIGSFSKILQMIPGFGNSMKE 362
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ + ++EK L +EA+I +MT +ER+ P+LL S R+ R+A+ SG T QV++L+
Sbjct: 363 LKNINLDDSEKELCKIEAIINSMTIKERKNPKLLMGSASRKSRIAKGSGSTVNQVNKLIK 422
Query: 501 QLFQMRVRMKNLMGV 515
M MK G+
Sbjct: 423 DFENMSKMMKQFKGM 437
>gi|164688563|ref|ZP_02212591.1| hypothetical protein CLOBAR_02208 [Clostridium bartlettii DSM
16795]
gi|164602976|gb|EDQ96441.1| signal recognition particle protein [Clostridium bartlettii DSM
16795]
Length = 450
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/447 (48%), Positives = 305/447 (68%), Gaps = 8/447 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A++KLK + LT++++ MR+++ ALLEADV+ VV+ FV+ V E+ V
Sbjct: 2 IFEGLSDKLQGAFSKLKSKGKLTEKDVKAAMREVKLALLEADVNFKVVKDFVKKVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +EL LMG S++ + PT+I++ GLQG GKTT S KL
Sbjct: 62 GQEVMESLTPAQHVIKIVNEELTALMGDVQSKITISSKPPTIIMMVGLQGAGKTTTSGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y KKQGK +LVA DVYRPAAI QL ++G+ + + V+ G + P IAK GL A K
Sbjct: 122 GGYFKKQGKKPLLVACDVYRPAAIKQLEVVGKSLDIEVFNMGDKENPVNIAKAGLSHAIK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N D+VI+DTAGRL ID+ +MDELK +K + P E+LLVVD+MTGQ+A + +F+ +G
Sbjct: 182 NNNDLVIIDTAGRLHIDEELMDELKSIKSEVRPHEILLVVDSMTGQDAVNVAESFDNALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS++ V+ KPIK +G GE+++DLEPF+PDRMA RILGMGDVL
Sbjct: 242 IDGVVLTKLDGDTRGGAALSIRAVTQKPIKFIGMGEKLDDLEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE M E A+ + K+ FDF DFL Q + +MGSM +++GMIPGMG I
Sbjct: 302 SLIEKAQETMDMEKAKALGAKLKKQEFDFEDFLDQMEQIQKMGSMDKILGMIPGMGDIKN 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
V K + ++A+I++MT EER P++L S R++R+A+ SG + Q+V++L+ Q
Sbjct: 362 QLGDVDMNGKEMNRIKAIIQSMTVEERRNPQILNAS--RKRRIAKGSGTSVQEVNKLIKQ 419
Query: 502 LFQMRVRMK----NLMGVMEGGSLPAL 524
L +M+ MK N G+ + G P L
Sbjct: 420 LNEMKKMMKMFTSNSKGMKKRGGFPGL 446
>gi|16803841|ref|NP_465326.1| hypothetical protein lmo1801 [Listeria monocytogenes EGD-e]
gi|47097384|ref|ZP_00234935.1| signal recognition particle protein [Listeria monocytogenes str.
1/2a F6854]
gi|254912359|ref|ZP_05262371.1| signal recognition particle protein [Listeria monocytogenes J2818]
gi|254936686|ref|ZP_05268383.1| signal recognition particle protein [Listeria monocytogenes F6900]
gi|284802247|ref|YP_003414112.1| hypothetical protein LM5578_2003 [Listeria monocytogenes 08-5578]
gi|284995389|ref|YP_003417157.1| hypothetical protein LM5923_1954 [Listeria monocytogenes 08-5923]
gi|386044109|ref|YP_005962914.1| signal recognition particle protein [Listeria monocytogenes 10403S]
gi|386047453|ref|YP_005965785.1| signal recognition particle protein [Listeria monocytogenes J0161]
gi|386050778|ref|YP_005968769.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-561]
gi|386054056|ref|YP_005971614.1| signal recognition particle protein [Listeria monocytogenes Finland
1998]
gi|404284297|ref|YP_006685194.1| signal recognition particle protein [Listeria monocytogenes
SLCC2372]
gi|404411102|ref|YP_006696690.1| signal recognition particle protein [Listeria monocytogenes
SLCC5850]
gi|404413880|ref|YP_006699467.1| signal recognition particle protein [Listeria monocytogenes
SLCC7179]
gi|405758852|ref|YP_006688128.1| signal recognition particle protein [Listeria monocytogenes
SLCC2479]
gi|16411255|emb|CAC99879.1| ffh [Listeria monocytogenes EGD-e]
gi|47014232|gb|EAL05214.1| signal recognition particle protein [Listeria monocytogenes str.
1/2a F6854]
gi|258609282|gb|EEW21890.1| signal recognition particle protein [Listeria monocytogenes F6900]
gi|284057809|gb|ADB68750.1| hypothetical protein LM5578_2003 [Listeria monocytogenes 08-5578]
gi|284060856|gb|ADB71795.1| hypothetical protein LM5923_1954 [Listeria monocytogenes 08-5923]
gi|293590340|gb|EFF98674.1| signal recognition particle protein [Listeria monocytogenes J2818]
gi|345534444|gb|AEO03885.1| signal recognition particle protein [Listeria monocytogenes J0161]
gi|345537343|gb|AEO06783.1| signal recognition particle protein [Listeria monocytogenes 10403S]
gi|346424624|gb|AEO26149.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-561]
gi|346646707|gb|AEO39332.1| signal recognition particle protein [Listeria monocytogenes Finland
1998]
gi|404230928|emb|CBY52332.1| signal recognition particle protein [Listeria monocytogenes
SLCC5850]
gi|404233799|emb|CBY55202.1| signal recognition particle protein [Listeria monocytogenes
SLCC2372]
gi|404236734|emb|CBY58136.1| signal recognition particle protein [Listeria monocytogenes
SLCC2479]
gi|404239579|emb|CBY60980.1| signal recognition particle protein [Listeria monocytogenes
SLCC7179]
gi|441471557|emb|CCQ21312.1| Signal recognition particle protein [Listeria monocytogenes]
gi|441474688|emb|CCQ24442.1| Signal recognition particle protein [Listeria monocytogenes N53-1]
Length = 450
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|336399713|ref|ZP_08580513.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
gi|336069449|gb|EGN58083.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
Length = 442
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/432 (50%), Positives = 297/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE ++ LKGE +T+ N+ ++D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLTDRLERSFKILKGEGKITELNVAATLKDVRRALLDADVNYKVAKDFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ ++P Q +VKIV DEL +LMGGE +EL SRP+VIL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAIKPGQLMVKIVHDELARLMGGEAAEL-HLNSRPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQ K+ +LVA D+YRPAAIDQL ++GE V V VY+ ++IA L+EAK
Sbjct: 120 ANLLKNKQHKNPLLVACDIYRPAAIDQLKVVGEGVSVSVYSEPDNKNVNEIADHALQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVI+DTAGRL +D+ MM+E+ +K ++P E L VVD+MTGQ+A FN +
Sbjct: 180 MKGHDVVIIDTAGRLAVDEQMMNEISSLKNHIHPDETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+ME ++ F+PDRMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMEAIDVFHPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFLKQ + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFLKQIEQIKKMGNIKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + +EA+I +MTP+ER PE+L +S R+ R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-NVDIDNNAFNGIEAIIRSMTPQERTNPEILNQS--RKLRIAKGSGTTIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|314933415|ref|ZP_07840780.1| signal recognition particle protein [Staphylococcus caprae C87]
gi|313653565|gb|EFS17322.1| signal recognition particle protein [Staphylococcus caprae C87]
Length = 455
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVPPQQIVENALQHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRDSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|251797472|ref|YP_003012203.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
gi|247545098|gb|ACT02117.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
Length = 462
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 298/430 (69%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ ++KL+G+ +T+E++ E MR++R ALLEADV+ VV+ F+ V E+A+G
Sbjct: 4 FESLTNRLQNVFSKLRGKGKVTEEDLNEAMREVRLALLEADVNFKVVKDFIAKVKEKALG 63
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ + + P ++ IV EL +LMGG S+L A PTVI++ GLQG GKTT +AKLA
Sbjct: 64 LDVSKSFTPGMVVIDIVNKELTELMGGTQSKLAKANKPPTVIMMVGLQGAGKTTTTAKLA 123
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K +LVA D+YRPAAI QL +LGEQ+ PV++ G + P +IAK GL A++
Sbjct: 124 KLLQKGNSKPLLVACDIYRPAAIKQLQVLGEQINAPVFSLGDQTSPVEIAKAGLAHAREN 183
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+ D VI DTAGRL ID+A+M+ELK + + + P EVLLVVDAMTGQ+A + +F+ ++ +
Sbjct: 184 HNDYVIFDTAGRLHIDEALMEELKQIHQNVKPDEVLLVVDAMTGQDAVNVAQSFHEQLEL 243
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+GKPIK GE+++ LEPF+PDRMA RILGMGD+LS
Sbjct: 244 TGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKIDALEPFHPDRMASRILGMGDMLS 303
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI--T 442
+EKAQ + + A EM++K+ +A F F+DFL+Q + +G + +++ M+PGM K+
Sbjct: 304 LIEKAQANIDADKAAEMERKMRTAEFTFDDFLEQMAQIRNLGPLDQLMDMLPGMNKMKGN 363
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA++ +MT E++KPELL S RRKRVA SG + +V++L+ Q
Sbjct: 364 MKDMKVDEKQINRVEAIVRSMTKAEKQKPELLNHS--RRKRVAAGSGTSITEVNRLIKQF 421
Query: 503 FQMRVRMKNL 512
MR MK
Sbjct: 422 EDMRKMMKQF 431
>gi|420185458|ref|ZP_14691550.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM040]
gi|394254444|gb|EJD99413.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM040]
Length = 455
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKMRGKGKITEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|116873236|ref|YP_850017.1| signal recognition particle protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116742114|emb|CAK21238.1| signal recognition particle protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 450
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK V GE+ME +E F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDAEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMQVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|46908032|ref|YP_014421.1| signal recognition particle protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47093840|ref|ZP_00231584.1| signal recognition particle protein [Listeria monocytogenes str. 4b
H7858]
gi|226224404|ref|YP_002758511.1| signal recognition particle protein Ffh [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254826157|ref|ZP_05231158.1| signal recognition particle protein [Listeria monocytogenes FSL
J1-194]
gi|254933273|ref|ZP_05266632.1| signal recognition particle protein [Listeria monocytogenes
HPB2262]
gi|254994058|ref|ZP_05276248.1| hypothetical protein LmonocytoFSL_14589 [Listeria monocytogenes FSL
J2-064]
gi|255521154|ref|ZP_05388391.1| hypothetical protein LmonocFSL_08006 [Listeria monocytogenes FSL
J1-175]
gi|300763886|ref|ZP_07073883.1| signal recognition particle protein [Listeria monocytogenes FSL
N1-017]
gi|386732541|ref|YP_006206037.1| signal recognition particle protein [Listeria monocytogenes
07PF0776]
gi|404281413|ref|YP_006682311.1| signal recognition particle protein [Listeria monocytogenes
SLCC2755]
gi|405750152|ref|YP_006673618.1| signal recognition particle protein [Listeria monocytogenes ATCC
19117]
gi|405753027|ref|YP_006676492.1| signal recognition particle protein [Listeria monocytogenes
SLCC2378]
gi|405755961|ref|YP_006679425.1| signal recognition particle protein [Listeria monocytogenes
SLCC2540]
gi|406704584|ref|YP_006754938.1| signal recognition particle protein [Listeria monocytogenes L312]
gi|417315453|ref|ZP_12102129.1| signal recognition particle protein [Listeria monocytogenes J1816]
gi|424823562|ref|ZP_18248575.1| Signal recognition particle [Listeria monocytogenes str. Scott A]
gi|46881302|gb|AAT04598.1| signal recognition particle protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47017781|gb|EAL08570.1| signal recognition particle protein [Listeria monocytogenes str. 4b
H7858]
gi|225876866|emb|CAS05575.1| Putative signal recognition particle protein Ffh [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293584833|gb|EFF96865.1| signal recognition particle protein [Listeria monocytogenes
HPB2262]
gi|293595397|gb|EFG03158.1| signal recognition particle protein [Listeria monocytogenes FSL
J1-194]
gi|300515622|gb|EFK42672.1| signal recognition particle protein [Listeria monocytogenes FSL
N1-017]
gi|328466157|gb|EGF37314.1| signal recognition particle protein [Listeria monocytogenes J1816]
gi|332312242|gb|EGJ25337.1| Signal recognition particle [Listeria monocytogenes str. Scott A]
gi|384391299|gb|AFH80369.1| signal recognition particle protein [Listeria monocytogenes
07PF0776]
gi|404219352|emb|CBY70716.1| signal recognition particle protein [Listeria monocytogenes ATCC
19117]
gi|404222227|emb|CBY73590.1| signal recognition particle protein [Listeria monocytogenes
SLCC2378]
gi|404225161|emb|CBY76523.1| signal recognition particle protein [Listeria monocytogenes
SLCC2540]
gi|404228048|emb|CBY49453.1| signal recognition particle protein [Listeria monocytogenes
SLCC2755]
gi|406361614|emb|CBY67887.1| signal recognition particle protein [Listeria monocytogenes L312]
Length = 450
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 GEMKKMMKQM 430
>gi|421489046|ref|ZP_15936434.1| signal recognition particle protein [Streptococcus oralis SK304]
gi|400368263|gb|EJP21278.1| signal recognition particle protein [Streptococcus oralis SK304]
Length = 523
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/431 (46%), Positives = 301/431 (69%), Gaps = 4/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HDVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN+++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNVQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANNSA 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 363 LQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLM 513
Q + M+ +M
Sbjct: 421 NQAKQLMQGIM 431
>gi|319892235|ref|YP_004149110.1| signal recognition particle subunit Ffh SRP54 [Staphylococcus
pseudintermedius HKU10-03]
gi|317161931|gb|ADV05474.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
pseudintermedius HKU10-03]
Length = 455
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K+KG+ +T+ +I MR++R ALLEADV+ VV+ FV VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKIKGKGKVTEADIKAMMREVRLALLEADVNFKVVKNFVNTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGG+ + + AK PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQEELTTLMGGDNTSITMAKKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVAGD+YRPAAI+QL +G+Q+ +PVY+ G +V P QI + L+ AK
Sbjct: 123 LLMRKKYNKKPLLVAGDIYRPAAINQLQTVGKQIDIPVYSEGDQVPPQQIVQNALQHAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAESFDQQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRAVTEKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + +E A +++KK+ +++F DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDEEKARDLEKKMRTSSFTLEDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTPEERE P+ L S R++R+A SG+T Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPEERENPDKLNVS--RKRRIAAGSGRTLQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|27467830|ref|NP_764467.1| ffh protein [Staphylococcus epidermidis ATCC 12228]
gi|251810667|ref|ZP_04825140.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876331|ref|ZP_06285198.1| signal recognition particle protein [Staphylococcus epidermidis
SK135]
gi|293366798|ref|ZP_06613474.1| signal recognition particle protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417647383|ref|ZP_12297223.1| signal recognition particle protein [Staphylococcus epidermidis
VCU144]
gi|417656653|ref|ZP_12306336.1| signal recognition particle protein [Staphylococcus epidermidis
VCU028]
gi|417658957|ref|ZP_12308570.1| signal recognition particle protein [Staphylococcus epidermidis
VCU045]
gi|417909837|ref|ZP_12553570.1| signal recognition particle protein [Staphylococcus epidermidis
VCU037]
gi|417910876|ref|ZP_12554592.1| signal recognition particle protein [Staphylococcus epidermidis
VCU105]
gi|417913396|ref|ZP_12557063.1| signal recognition particle protein [Staphylococcus epidermidis
VCU109]
gi|418325071|ref|ZP_12936281.1| signal recognition particle protein [Staphylococcus epidermidis
VCU071]
gi|418411657|ref|ZP_12984923.1| signal recognition particle protein [Staphylococcus epidermidis
BVS058A4]
gi|418605396|ref|ZP_13168721.1| signal recognition particle protein [Staphylococcus epidermidis
VCU041]
gi|418606372|ref|ZP_13169653.1| signal recognition particle protein [Staphylococcus epidermidis
VCU057]
gi|418609835|ref|ZP_13172969.1| signal recognition particle protein [Staphylococcus epidermidis
VCU065]
gi|418616590|ref|ZP_13179514.1| signal recognition particle protein [Staphylococcus epidermidis
VCU120]
gi|418622035|ref|ZP_13184791.1| signal recognition particle protein [Staphylococcus epidermidis
VCU123]
gi|418624485|ref|ZP_13187160.1| signal recognition particle protein [Staphylococcus epidermidis
VCU125]
gi|418628905|ref|ZP_13191421.1| signal recognition particle protein [Staphylococcus epidermidis
VCU127]
gi|418664755|ref|ZP_13226221.1| signal recognition particle protein [Staphylococcus epidermidis
VCU081]
gi|419768646|ref|ZP_14294762.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|419772629|ref|ZP_14298660.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163425|ref|ZP_14670172.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM095]
gi|420165227|ref|ZP_14671931.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM088]
gi|420167593|ref|ZP_14674245.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM087]
gi|420169780|ref|ZP_14676358.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM070]
gi|420172763|ref|ZP_14679261.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM067]
gi|420182907|ref|ZP_14689040.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM049]
gi|420187558|ref|ZP_14693578.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM039]
gi|420194025|ref|ZP_14699854.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM021]
gi|420197128|ref|ZP_14702852.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM020]
gi|420202049|ref|ZP_14707644.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM018]
gi|420206443|ref|ZP_14711953.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM008]
gi|420209484|ref|ZP_14714921.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM003]
gi|420211872|ref|ZP_14717228.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM001]
gi|420214283|ref|ZP_14719562.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05005]
gi|420216113|ref|ZP_14721335.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05001]
gi|420220018|ref|ZP_14725008.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04008]
gi|420221971|ref|ZP_14726896.1| signal recognition particle protein [Staphylococcus epidermidis
NIH08001]
gi|420224834|ref|ZP_14729672.1| signal recognition particle protein [Staphylococcus epidermidis
NIH06004]
gi|420227028|ref|ZP_14731801.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05003]
gi|420229350|ref|ZP_14734056.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04003]
gi|420231709|ref|ZP_14736354.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051668]
gi|421607261|ref|ZP_16048507.1| signal recognition particle protein [Staphylococcus epidermidis
AU12-03]
gi|27315375|gb|AAO04509.1|AE016747_6 ffh protein [Staphylococcus epidermidis ATCC 12228]
gi|251805827|gb|EES58484.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295356|gb|EFA87883.1| signal recognition particle protein [Staphylococcus epidermidis
SK135]
gi|291319099|gb|EFE59469.1| signal recognition particle protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329724304|gb|EGG60816.1| signal recognition particle protein [Staphylococcus epidermidis
VCU144]
gi|329736314|gb|EGG72586.1| signal recognition particle protein [Staphylococcus epidermidis
VCU028]
gi|329736596|gb|EGG72862.1| signal recognition particle protein [Staphylococcus epidermidis
VCU045]
gi|341652446|gb|EGS76234.1| signal recognition particle protein [Staphylococcus epidermidis
VCU037]
gi|341655064|gb|EGS78800.1| signal recognition particle protein [Staphylococcus epidermidis
VCU105]
gi|341655678|gb|EGS79402.1| signal recognition particle protein [Staphylococcus epidermidis
VCU109]
gi|365228977|gb|EHM70149.1| signal recognition particle protein [Staphylococcus epidermidis
VCU071]
gi|374402493|gb|EHQ73518.1| signal recognition particle protein [Staphylococcus epidermidis
VCU041]
gi|374406171|gb|EHQ77074.1| signal recognition particle protein [Staphylococcus epidermidis
VCU065]
gi|374408325|gb|EHQ79156.1| signal recognition particle protein [Staphylococcus epidermidis
VCU057]
gi|374410201|gb|EHQ80962.1| signal recognition particle protein [Staphylococcus epidermidis
VCU081]
gi|374820668|gb|EHR84744.1| signal recognition particle protein [Staphylococcus epidermidis
VCU120]
gi|374827410|gb|EHR91272.1| signal recognition particle protein [Staphylococcus epidermidis
VCU123]
gi|374827714|gb|EHR91575.1| signal recognition particle protein [Staphylococcus epidermidis
VCU125]
gi|374834899|gb|EHR98530.1| signal recognition particle protein [Staphylococcus epidermidis
VCU127]
gi|383359256|gb|EID36686.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|383359472|gb|EID36895.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|394235114|gb|EJD80688.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM095]
gi|394236394|gb|EJD81928.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM088]
gi|394237621|gb|EJD83107.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM087]
gi|394241440|gb|EJD86854.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM067]
gi|394243080|gb|EJD88454.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM070]
gi|394249370|gb|EJD94583.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM049]
gi|394256000|gb|EJE00936.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM039]
gi|394265935|gb|EJE10581.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM020]
gi|394266723|gb|EJE11348.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM021]
gi|394270022|gb|EJE14545.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM018]
gi|394278282|gb|EJE22599.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM008]
gi|394278931|gb|EJE23243.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM003]
gi|394280382|gb|EJE24663.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM001]
gi|394283648|gb|EJE27813.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05005]
gi|394287025|gb|EJE30999.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04008]
gi|394290002|gb|EJE33872.1| signal recognition particle protein [Staphylococcus epidermidis
NIH08001]
gi|394292563|gb|EJE36305.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05001]
gi|394294237|gb|EJE37923.1| signal recognition particle protein [Staphylococcus epidermidis
NIH06004]
gi|394297529|gb|EJE41126.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05003]
gi|394299116|gb|EJE42667.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04003]
gi|394302251|gb|EJE45699.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051668]
gi|406657053|gb|EKC83446.1| signal recognition particle protein [Staphylococcus epidermidis
AU12-03]
gi|410891240|gb|EKS39037.1| signal recognition particle protein [Staphylococcus epidermidis
BVS058A4]
Length = 455
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|408356888|ref|YP_006845419.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
gi|407727659|dbj|BAM47657.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
Length = 450
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/433 (46%), Positives = 306/433 (70%), Gaps = 4/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L++ K+ G+ ++++++ R++R ALLEADV+ VV+ FV + +AVG
Sbjct: 3 FEGLADRLQSTIKKMTGKGKVSEQDVKVMAREVRLALLEADVNFKVVKEFVNNIRTRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVMESLTPGQQVIKIVKEELTALMGGEQSKIAVADRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA DVYRPAA+DQL +G+Q+ +PV+ GT+ P +IA + ++ AK+
Sbjct: 123 NLLRKKHNRKPLLVAADVYRPAAVDQLKTVGKQLNIPVFEKGTDANPVEIANEAIQYAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID +MDEL +K+ L+P E+ LVVD+MTGQ+A + FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDTDLMDELYQIKQNLSPDEIFLVVDSMTGQDAVNVAENFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS+K V+ KPIK +G GE+++ LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIKSVTNKPIKFIGMGEKLDQLEDFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+ + ++ A+E++ K+ SA+FDF+DFL+Q V MG + ++ ++PG K+
Sbjct: 303 SLIEKAEATIDEKKAKELEDKMRSASFDFDDFLEQMEQVRSMGPLDELLSLLPGANKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ +K L +EA+I++MT +ER+ P L+ +P R+KR+AQ SG+ +V++L+ Q
Sbjct: 363 LKNVQLDDKQLVHVEAIIKSMTKQERKDPSLM--NPSRKKRIAQGSGRPIAEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGV 515
+MR MK + G+
Sbjct: 421 NEMRKMMKQMSGM 433
>gi|333031351|ref|ZP_08459412.1| signal recognition particle protein [Bacteroides coprosuis DSM
18011]
gi|332741948|gb|EGJ72430.1| signal recognition particle protein [Bacteroides coprosuis DSM
18011]
Length = 441
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/432 (49%), Positives = 297/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE T+T+ N+ E ++D+RRALL+ADV+ V ++F V E+A+
Sbjct: 1 MFDNLSERLERSFKLLKGEGTITEINVAETLKDVRRALLDADVNYKVAKKFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE ++ + +P VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTAVKPSQLMVKIVHDELTQLMGGETADFD-VQGKPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGK-SCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK + S +LVA DVYRPAAIDQL +LGEQ+ VPVY P +IA+ ++EAK
Sbjct: 120 AKLLKTKKHKSPLLVACDVYRPAAIDQLKVLGEQINVPVYAEPDSKDPVKIAQNAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VI+DTAGRL ID+ MM+E++ +K+ +NP EVL VVD+MTGQ+A FN +
Sbjct: 180 AKGNDIVIIDTAGRLAIDEQMMNEIESIKKAINPNEVLFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE++E ++ F+P RMA RILGMGD+
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLEAIDQFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +++A+++QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEDEAKKLQKKIQKNQFDFNDFLSQIHQIKKMGNLKELAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P L+ + RRKR+A SG T Q+V++L+ Q
Sbjct: 360 -KDIDIDDNAFKSIEAIIFSMTPAERTDPALI--NGTRRKRIADGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|254829203|ref|ZP_05233890.1| signal recognition particle protein [Listeria monocytogenes FSL
N3-165]
gi|290893069|ref|ZP_06556058.1| signal recognition particle protein [Listeria monocytogenes FSL
J2-071]
gi|404408245|ref|YP_006690960.1| signal recognition particle protein [Listeria monocytogenes
SLCC2376]
gi|422809882|ref|ZP_16858293.1| Signal recognition particle, subunit Ffh SRP54 [Listeria
monocytogenes FSL J1-208]
gi|258601615|gb|EEW14940.1| signal recognition particle protein [Listeria monocytogenes FSL
N3-165]
gi|290557429|gb|EFD90954.1| signal recognition particle protein [Listeria monocytogenes FSL
J2-071]
gi|378751546|gb|EHY62134.1| Signal recognition particle, subunit Ffh SRP54 [Listeria
monocytogenes FSL J1-208]
gi|404242394|emb|CBY63794.1| signal recognition particle protein [Listeria monocytogenes
SLCC2376]
Length = 450
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDAEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|424714677|ref|YP_007015392.1| Signal recognition particle protein [Listeria monocytogenes
serotype 4b str. LL195]
gi|424013861|emb|CCO64401.1| Signal recognition particle protein [Listeria monocytogenes
serotype 4b str. LL195]
Length = 451
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 4 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 63
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 64 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 123
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 124 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 183
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 184 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 243
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 244 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 303
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG K+
Sbjct: 304 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKG 363
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 364 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 421
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 422 GEMKKMMKQM 431
>gi|29376252|ref|NP_815406.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227518889|ref|ZP_03948938.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256762629|ref|ZP_05503209.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256961798|ref|ZP_05565969.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256964995|ref|ZP_05569166.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257419425|ref|ZP_05596419.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|293382861|ref|ZP_06628779.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|293389652|ref|ZP_06634107.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|307273091|ref|ZP_07554337.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|312907668|ref|ZP_07766659.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|312910285|ref|ZP_07769132.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|384513375|ref|YP_005708468.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|422714488|ref|ZP_16771214.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|422715746|ref|ZP_16772462.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|424676631|ref|ZP_18113502.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|424681553|ref|ZP_18118340.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|424683743|ref|ZP_18120493.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|424686353|ref|ZP_18123021.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|424690375|ref|ZP_18126910.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|424695468|ref|ZP_18131851.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|424696793|ref|ZP_18133134.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|424699821|ref|ZP_18136032.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|424703166|ref|ZP_18139300.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|424707337|ref|ZP_18143321.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|424717003|ref|ZP_18146301.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|424720581|ref|ZP_18149682.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|424724129|ref|ZP_18153078.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|424733720|ref|ZP_18162275.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|424743981|ref|ZP_18172286.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|424750511|ref|ZP_18178575.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|430360637|ref|ZP_19426358.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|430370543|ref|ZP_19429068.1| signal recognition particle protein [Enterococcus faecalis M7]
gi|29343715|gb|AAO81476.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227073680|gb|EEI11643.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256683880|gb|EEU23575.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256952294|gb|EEU68926.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256955491|gb|EEU72123.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257161253|gb|EEU91213.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|291079526|gb|EFE16890.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|291081045|gb|EFE18008.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|306510076|gb|EFM79100.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|310626696|gb|EFQ09979.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|311289558|gb|EFQ68114.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|315576091|gb|EFU88282.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|315580665|gb|EFU92856.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|327535264|gb|AEA94098.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|402351260|gb|EJU86152.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|402356251|gb|EJU90985.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|402364502|gb|EJU98938.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|402364741|gb|EJU99176.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|402367207|gb|EJV01548.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|402368406|gb|EJV02722.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|402375750|gb|EJV09730.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|402377122|gb|EJV11033.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|402384935|gb|EJV18476.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|402385171|gb|EJV18711.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|402386351|gb|EJV19857.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|402391050|gb|EJV24366.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|402393052|gb|EJV26282.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|402395863|gb|EJV28944.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|402399657|gb|EJV32523.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|402406489|gb|EJV39039.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|429512752|gb|ELA02349.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|429515307|gb|ELA04823.1| signal recognition particle protein [Enterococcus faecalis M7]
Length = 472
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + +P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELADPNEILLVVDAMTGQDAVNVADSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KESKKMMQQM 430
>gi|386319497|ref|YP_006015660.1| signal recognition particle protein [Staphylococcus
pseudintermedius ED99]
gi|323464668|gb|ADX76821.1| signal recognition particle protein [Staphylococcus
pseudintermedius ED99]
Length = 455
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K+KG+ +T+ +I MR++R ALLEADV+ VV+ FV VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKIKGKGKVTEADIKAMMREVRLALLEADVNFKVVKNFVNTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGG+ + + AK PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQEELTTLMGGDNTSITMAKKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVAGD+YRPAAI+QL +G+Q+ +PVY+ G +V P QI + L+ AK
Sbjct: 123 LLMRKKYNKKPLLVAGDIYRPAAINQLQTVGKQIDIPVYSEGDQVPPQQIVQNALQHAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAESFDQQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRAVTEKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + +E A +++KK+ +++F DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDEEKARDLEKKMRTSSFTLEDFLEQLDQVKSLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTPEERE P+ L S R++R+A SG+T Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPEERENPDKLNVS--RKRRIAAGSGRTLQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|257086986|ref|ZP_05581347.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|422721959|ref|ZP_16778536.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|424673086|ref|ZP_18110029.1| signal recognition particle protein [Enterococcus faecalis 599]
gi|256995016|gb|EEU82318.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|315027856|gb|EFT39788.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|402352896|gb|EJU87732.1| signal recognition particle protein [Enterococcus faecalis 599]
Length = 472
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 304/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT+ L+ A +K++ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L K + +L+AGDVYRPAAIDQL +LG+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TK+DGD+RGGAALS++ V+ PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKMDGDTRGGAALSIRAVTSAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM +
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKDVARKRAMVLSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ + M+ +
Sbjct: 421 KESKKMMQQM 430
>gi|345880632|ref|ZP_08832178.1| signal recognition particle protein [Prevotella oulorum F0390]
gi|343922544|gb|EGV33244.1| signal recognition particle protein [Prevotella oulorum F0390]
Length = 448
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/450 (47%), Positives = 298/450 (66%), Gaps = 13/450 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ ++D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLSDRLERSFKILKGEGQITEINVASTLKDVRRALLDADVNFKVAKNFTDKVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL LMGGE ++ + P +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELADLMGGEAVDINL-EGHPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI+QL ++GEQ+ VPVY IA+ ++EAK
Sbjct: 120 ANLLKLKRNKKPLLVACDVYRPAAIEQLKVVGEQIQVPVYAEPENKDVVAIAQHAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL +D+ MM+E+ +K L+P+E L VVDAMTGQ+A FN +
Sbjct: 180 AKGNDVVIVDTAGRLAVDEEMMNEIASLKEALHPSETLFVVDAMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS++ + KPIK VG GE+ME L+ F+P+RMA RILGMGD+
Sbjct: 240 DFDGVILTKLDGDTRGGAALSIRTIVTKPIKFVGTGEKMEALDVFHPNRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +Q+KI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQRKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + +EA+I +MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -KDVDIDDNAFVSIEAIIRSMTPKERTNPEILNTS--RRQRIAKGSGTNIQEVNKLIKQF 416
Query: 503 FQMRVRMK--------NLMGVMEGGSLPAL 524
Q R MK +M M+G +P +
Sbjct: 417 DQTRKMMKMVTGNQMAGMMSRMKGMKIPGM 446
>gi|427394186|ref|ZP_18887688.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
gi|425730174|gb|EKU93017.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
Length = 499
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 304/441 (68%), Gaps = 10/441 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +T+ ++ + MR++R ALLEADV+ VVR FV+ V E+A+G
Sbjct: 3 FEGLSGRLQDAFSGLRKKGKITESDVKDAMREVRLALLEADVNYKVVREFVKTVREKAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ V Q +VKIV DEL LMGG+ +++ TV ++ GLQG GKTT + KLA
Sbjct: 63 EEVLDNVDGGQMVVKIVNDELTDLMGGDRQDIITNDQGITVYMMTGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYL+K M+VAGDVYRPAAIDQL +G+++ +PV++ G +V P +IA+QG++ AK
Sbjct: 123 NYLRKHKNMKPMMVAGDVYRPAAIDQLETIGKELNIPVFSMGDQVSPVEIAEQGIQAAKD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+N +VVI+DTAGRL +D+A+MDEL ++K ++P E+ LVVDAMTGQ+A + FN ++
Sbjct: 183 QNRNVVIIDTAGRLHVDQALMDELANIKSAVDPEEIFLVVDAMTGQDAVNVADAFNDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+ ILTKLDGD+RGGAALS+ +++ KPIK G GE+++ L+PFYPDRMA RILGMGD+L
Sbjct: 243 ISSVILTKLDGDTRGGAALSISKITNKPIKFTGTGEKLDALDPFYPDRMANRILGMGDIL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ VEKAQ+ M ++ A E+ K+ +DFNDF++Q + MG M +I MIPGM ++ P
Sbjct: 303 TLVEKAQQDMDEKRARELADKMADQTYDFNDFIEQMDQMRNMGPMEDIIKMIPGMNQL-P 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ +K L M+A++++MT EER P++L+++ RR+R+A SG+ V +L+ Q
Sbjct: 362 GLDDFQVDDKDLDRMKAIVQSMTMEERRNPDMLSQN--RRRRIAAGSGRPLADVHKLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLP 522
Q R LMG M G +P
Sbjct: 420 FKQSR----ELMGKMSKGKMP 436
>gi|418414279|ref|ZP_12987494.1| signal recognition particle protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|410876886|gb|EKS24783.1| signal recognition particle protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 455
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV++F+ VSE+A+G
Sbjct: 3 FEGLSERLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKQFINTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQDELTQLMGGENTTIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVAGD+YRPAAIDQL +G+Q+ VPVY+ G +VKP QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAGDIYRPAAIDQLQTVGKQLDVPVYSEGDQVKPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P EV+LVVDAMTGQ+ + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKAISKPDEVMLVVDAMTGQDTVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+M+ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKMDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F DFL Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRDSSFTLEDFLDQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K + ++A+I++MTP ER P L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 MNKLNMDDKQIDHIKAIIQSMTPMERANPATLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|423612062|ref|ZP_17587923.1| signal recognition particle protein [Bacillus cereus VD107]
gi|401247069|gb|EJR53413.1| signal recognition particle protein [Bacillus cereus VD107]
Length = 449
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|297617092|ref|YP_003702251.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144929|gb|ADI01686.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 447
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/423 (50%), Positives = 293/423 (69%), Gaps = 7/423 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L++ L+ + KL+G+ LT+E++ MR++R ALLEADV+ VV+ FV V E+AV
Sbjct: 2 VFEGLSTRLQETFRKLRGKGKLTEEDVNLAMREVRLALLEADVNYKVVKDFVARVKERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VKIV +EL +LMGG+ ++L A PTV+++ GLQG GKTT AKL
Sbjct: 62 GQEVLKSLTPGQQVVKIVYEELTQLMGGDQTKLNLAAKPPTVVMMVGLQGTGKTTTCAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L QG+ +LVA D+YRPAAI QL +LGE+ PV++ G E P IA+ LE A+
Sbjct: 122 ARSLLAQGRRPLLVAADIYRPAAIKQLQVLGEKCNCPVFSMGQE-NPVNIARAALEYARS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL I++ +M+ELKD+K LNP E+LLVVDAMTGQ+A + ++FN ++G
Sbjct: 181 NGRDIVILDTAGRLHINEELMNELKDLKSSLNPHEILLVVDAMTGQDAVNVASSFNEQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALSVK V+G PIK G GE++EDLEPFYP+RMA RILGMGDV
Sbjct: 241 LTGVVLTKLDGDTRGGAALSVKAVAGCPIKFAGVGEKLEDLEPFYPNRMASRILGMGDVQ 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ + ++ A E+ KKI F DFL Q + V MG + ++ MIPG G +
Sbjct: 301 SLVEKAQASIDEKKARELGKKIRQQEFTLEDFLDQIQQVRSMGPLEDLLAMIPGFGNLKQ 360
Query: 444 AQVREA----EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + EK + +EA+I++MTPEER P +L S R+KR+A+ SG Q V++L+
Sbjct: 361 LKGFKTADIDEKEISRIEAIIKSMTPEERLNPTMLNSS--RKKRIAKGSGTRVQDVNRLL 418
Query: 500 AQL 502
Sbjct: 419 KHF 421
>gi|261367302|ref|ZP_05980185.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
gi|282570905|gb|EFB76440.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
Length = 451
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/429 (50%), Positives = 292/429 (68%), Gaps = 6/429 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L + KL+G+ L + +I MR++R ALLEADV+ V + F VSE+A+G
Sbjct: 3 FESLTERLNGVFKKLRGKGKLNEADIKAAMREVRMALLEADVNYKVAKDFCAQVSERAMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAKL 203
++ + P QQ+VKIV +EL KLMGG+ + + K++ TV+++ GLQG GKTT +AKL
Sbjct: 63 QEVMESLTPAQQVVKIVNEELTKLMGGDEPQYLHIKNKGQTVLMMCGLQGNGKTTHAAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
Y + QG+ +LVA DVYRPAAI QL I+GEQ GVPV+T GTE KP IA+Q + A+
Sbjct: 123 GKYYRSQGRRPLLVACDVYRPAAIQQLQIVGEQAGVPVFTMGTE-KPEHIAQQAMAHARD 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRLQID A+MDEL +K + E LLVVDAM GQEA + TFN +IG
Sbjct: 182 HGNDIVILDTAGRLQIDDALMDELVRIKEAVEVDETLLVVDAMAGQEAVNVAKTFNEKIG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK DGD+RGGAALSV V+GKPI G GE++EDLEPFYP RMA RILGMGDVL
Sbjct: 242 ITGVVLTKTDGDTRGGAALSVLAVTGKPIYFQGTGEKLEDLEPFYPSRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ V ++AE +++M FD ND L Q + V +MG S ++ M+PG +I
Sbjct: 302 SLIEKAQSVQNDKEAEAAARRMMENKFDMNDLLAQFQQVKKMGGASALLAMMPGGNQIDA 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ +K L +EA+I +MTP ER KPE++ +P R++R+A SG+T + V++L+ Q
Sbjct: 362 DALD--DKMLPRIEAIIYSMTPAERAKPEII--NPKRKRRIAAGSGQTVEAVNKLLRQYE 417
Query: 504 QMRVRMKNL 512
M+ MK +
Sbjct: 418 MMQKMMKKV 426
>gi|393784555|ref|ZP_10372718.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
gi|392665536|gb|EIY59060.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
Length = 440
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 293/432 (67%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKTFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E + K +P +IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVE-IDTKGQPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ + +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P +IA+ ++EA+
Sbjct: 120 ARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEPDSKNPVEIAQNAIKEAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM E+ +K + P E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEEMMKEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFNGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER PE+L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVTG 428
>gi|375256538|ref|YP_005015705.1| signal recognition particle protein [Tannerella forsythia ATCC
43037]
gi|363408351|gb|AEW22037.1| signal recognition particle protein [Tannerella forsythia ATCC
43037]
Length = 442
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/439 (48%), Positives = 295/439 (67%), Gaps = 5/439 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +++ N+ E ++D+RRALL+ADV+ V ++F V +A+
Sbjct: 1 MFENLSDRLERSFKLLKGEGKISELNVAETLKDVRRALLDADVNYKVAKQFTDTVKAKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV DEL LMGG +E S P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLTSLKPGQLMVKIVHDELAALMGGTAAEFNLTGS-PSVILMAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+GK+ +LVA DVYRPAAIDQL +LGEQ+GVPVY+ P IA + EAK
Sbjct: 120 ANMLKSKRGKNPLLVACDVYRPAAIDQLYVLGEQIGVPVYSERENKNPVDIALHAILEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL ID+ MM E+ +K+ + P E+L VVD+MTGQ+A FN +
Sbjct: 180 KTGRDLVIVDTAGRLAIDEQMMAEIAAIKKAIRPNEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+G +LTKLDGD+RGGAALS++ V KPIK +G GE+M+ L+ F+P+RMA RILGMGDV
Sbjct: 240 DFSGVVLTKLDGDTRGGAALSIRTVVDKPIKFIGTGEKMDALDVFHPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE + +A +QKK+ FDFNDFL Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEAEARRIQKKLAKNQFDFNDFLGQIQQIKKMGNLKDLASMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ E + K +EA+I +MTP+ER P +L S RR+R+A SG + Q V++L+ Q
Sbjct: 360 K-NIDIDENAFKGIEAIIYSMTPQERTNPSILNGS--RRQRIAAGSGTSVQDVNKLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSL 521
+ R M+ + V G +
Sbjct: 417 DETRKMMRMITTVKPGSRM 435
>gi|429724972|ref|ZP_19259833.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
gi|429151434|gb|EKX94302.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
Length = 448
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/432 (49%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKTFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGGE ++L ++RP+VIL+AGL G GKTT+S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELATLMGGESTDLKL-ENRPSVILMAGLNGAGKTTLSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +LK K+ + +L A D YRPAAI+QL +L EQ+ VP+Y E P +IA ++EAK
Sbjct: 120 ALFLKTKKNRRPLLAACDTYRPAAIEQLRVLAEQIDVPIYLNLEEKDPVKIALAAIQEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K+ D VIVDTAGRL ID+ +M+E+ VK NP E L VVDAMTGQ+A FN +
Sbjct: 180 AKSYDTVIVDTAGRLAIDETLMNEIAAVKEATNPDETLFVVDAMTGQDAVNTAKEFNSRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+ME L+ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKMEALDVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++Q+KI FDFNDFL Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEARKLQRKIQKNQFDFNDFLAQLQQIKKMGNIKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V ++++ +EA+I +MTP ER+ PE+L S R++R+A+ SGKT Q V++L+ Q
Sbjct: 360 -KDVEVDDRAILGVEAIILSMTPYERQHPEVLNGS--RKERIAKGSGKTVQDVNRLIKQF 416
Query: 503 FQMRVRMKNLMG 514
Q R MK + G
Sbjct: 417 DQTRKMMKMVSG 428
>gi|16800981|ref|NP_471249.1| hypothetical protein lin1915 [Listeria innocua Clip11262]
gi|423098710|ref|ZP_17086418.1| signal recognition particle protein [Listeria innocua ATCC 33091]
gi|16414416|emb|CAC97145.1| ffh [Listeria innocua Clip11262]
gi|370794537|gb|EHN62300.1| signal recognition particle protein [Listeria innocua ATCC 33091]
Length = 450
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK V GE+ME +E F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDAEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMQVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|366085823|ref|ZP_09452308.1| signal recognition particle protein [Lactobacillus zeae KCTC 3804]
Length = 478
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/445 (47%), Positives = 306/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ ++ E MR+IR ALLEADV+ VV+ F++ V +AVG
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDVREAMREIRLALLEADVNFDVVKTFIKNVRTKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KLA
Sbjct: 63 TEVLESLTPAQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL K+ +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KYLMDNEKARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDTDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKALAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A+E+ +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKNYDEKQAQEVAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQERENPDLL--NPSRRRRIAGGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|255026961|ref|ZP_05298947.1| hypothetical protein LmonocytFSL_12638 [Listeria monocytogenes FSL
J2-003]
Length = 450
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDAEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|423452854|ref|ZP_17429707.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|423470059|ref|ZP_17446803.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
gi|423483435|ref|ZP_17460125.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|423522325|ref|ZP_17498798.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|423558592|ref|ZP_17534894.1| signal recognition particle protein [Bacillus cereus MC67]
gi|401139413|gb|EJQ46975.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|401140986|gb|EJQ48541.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|401175019|gb|EJQ82222.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|401191860|gb|EJQ98882.1| signal recognition particle protein [Bacillus cereus MC67]
gi|402437311|gb|EJV69335.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
Length = 449
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKVEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|345859708|ref|ZP_08812042.1| signal recognition particle protein [Desulfosporosinus sp. OT]
gi|344327165|gb|EGW38609.1| signal recognition particle protein [Desulfosporosinus sp. OT]
Length = 451
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/429 (49%), Positives = 301/429 (70%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LKG+ L + ++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSEKLQETFKRLKGKGKLKEADVNEAMREVRIALLEADVNFKVVKDFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +E+++LMGG ++ A PTVILL GLQG GKTT +AKL
Sbjct: 61 GQEVLESLSPAQYVIKIVHEEMIELMGGATGKIPIASKPPTVILLLGLQGAGKTTHAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA DVYRPAAI QL +LGEQV VPV++ G +V P +IA+ ++ A
Sbjct: 121 ANMLKKQGKHPLLVACDVYRPAAIKQLEVLGEQVKVPVFSMG-QVSPVEIARASIKHANS 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +M EL+D+K + P E+LLVVDAMTGQ+A + +F+ ++G
Sbjct: 180 NGQDVVIIDTAGRLHINEELMTELRDIKNAVKPHEILLVVDAMTGQDAVNVAESFHKDLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V+G IK G GE+M+ +EPF+PDRMA RILGMGDVL
Sbjct: 240 LDGVILTKLDGDTRGGAALSIKAVTGCTIKFAGIGEKMDAIEPFHPDRMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE ++ A+EM++K+ F DFL Q + + +MG +S ++ MIPG+GK
Sbjct: 300 TLIEKAQESFDEKKAKEMEQKLRKQEFTLEDFLDQMQQMKKMGPLSSILEMIPGVGK-QL 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ EK +EA+I +MTPEER KP ++ +S R+KR+A+ SG + Q V +L+ Q
Sbjct: 359 KDVQIDEKDTAHLEAIIRSMTPEERRKPSVIKDS--RKKRIAKGSGTSVQDVGRLLKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|257870294|ref|ZP_05649947.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|357050559|ref|ZP_09111757.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
gi|257804458|gb|EEV33280.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|355381212|gb|EHG28339.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
Length = 472
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KL+ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTERLQQAMSKLRKKGKVSEADVKEMMREIRLALLEADVNLQVVKEFTKNVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL K +G E + + PTVI++AGLQG GKTT + KLA
Sbjct: 63 AEVLDSLSPAQQIVKIVDEELTKTLGSETVGIEKSPKIPTVIMMAGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L K + +++AGDVYRPAAIDQL +LG+Q+ VPV+ GT+V P +I +QG+ A++
Sbjct: 123 NHLIKTENARPLMIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTDVSPVEIVRQGMALARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+ +MDELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDETLMDELKQIKELAQPNEILLVVDAMTGQDAVNVADSFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS+++V+G PIK G GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRQVTGAPIKFTGTGEKLTDLEVFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFVEQIDQVMGMGPIEDLLKMIPGMSQMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + +AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKQIARQKAMVYSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KESRKMMQQM 430
>gi|30263848|ref|NP_846225.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47529273|ref|YP_020622.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186695|ref|YP_029947.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227813247|ref|YP_002813256.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229602210|ref|YP_002868082.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|254683447|ref|ZP_05147307.1| signal recognition particle protein [Bacillus anthracis str.
CNEVA-9066]
gi|254721376|ref|ZP_05183165.1| signal recognition particle protein [Bacillus anthracis str. A1055]
gi|254735883|ref|ZP_05193589.1| signal recognition particle protein [Bacillus anthracis str.
Western North America USA6153]
gi|254739516|ref|ZP_05197213.1| signal recognition particle protein [Bacillus anthracis str. Kruger
B]
gi|254751176|ref|ZP_05203215.1| signal recognition particle protein [Bacillus anthracis str.
Vollum]
gi|254756724|ref|ZP_05208753.1| signal recognition particle protein [Bacillus anthracis str.
Australia 94]
gi|386737667|ref|YP_006210848.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|421639600|ref|ZP_16080191.1| signal recognition particle protein [Bacillus anthracis str. BF1]
gi|30258492|gb|AAP27711.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47504421|gb|AAT33097.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180622|gb|AAT55998.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227003495|gb|ACP13238.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229266618|gb|ACQ48255.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|384387519|gb|AFH85180.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|403393265|gb|EJY90510.1| signal recognition particle protein [Bacillus anthracis str. BF1]
Length = 449
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 308/435 (70%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAIANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAG L ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGHLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|288553090|ref|YP_003425025.1| signal recognition particle protein [Bacillus pseudofirmus OF4]
gi|288544250|gb|ADC48133.1| signal recognition particle [Bacillus pseudofirmus OF4]
Length = 452
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ ++++++ + MR++R ALLEADV+ VV++F+ +V E+A+G
Sbjct: 3 FEGLAERLQDTLTKIRGKGKVSEQDVKDMMREVRLALLEADVNFKVVKQFIASVKEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P Q ++K+V +EL LMGGE S++ A PTV+++ GLQG GKTT +AKLA
Sbjct: 63 QEVMKSLTPGQMVIKVVNEELTALMGGEQSKIAVANKPPTVVMMVGLQGAGKTTTTAKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KKQ ++ MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NHLRKKQNRTPMLVAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +M EL++VK + P E+LLVVDAMTGQ+A + +FN ++
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMGELQEVKEIAKPDEILLVVDAMTGQDAVNVAESFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAA+SVK V+ PIK G GE+++ LEPFYPDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAAISVKAVTNTPIKFAGMGEKIDQLEPFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A E++KK+ + +F F+DFL+Q V MG + ++ M+PGM K
Sbjct: 303 TLIEKAQSNVDEEKARELEKKMRTMDFTFDDFLEQLDQVKSMGPLDEILNMMPGMNKAKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ +K L +EA++ +MT E++ P L+ S RR+R+A+ SG T Q V++L+ Q
Sbjct: 363 LKDLKVDDKQLVRVEAIVRSMTKAEKQDPSLMNAS--RRRRIAKGSGTTIQDVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK +
Sbjct: 421 EDMKKMMKQM 430
>gi|295094758|emb|CBK83849.1| signal recognition particle protein [Coprococcus sp. ART55/1]
Length = 448
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 300/438 (68%), Gaps = 10/438 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+ + LT++++ E M++++RALLEADV+ VV+ FV++VS++AVG
Sbjct: 3 FDSLSDKLQNVFKKLRSKGVLTEDDVKEAMKEVKRALLEADVNFKVVKSFVKSVSDRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP----TVILLAGLQGVGKTTVS 200
+++G+ P ++KIV++E+ KLMG E++E+ K RP T+I++ GLQG GKTT +
Sbjct: 63 EEVLKGLNPGHMVIKIVKEEMDKLMGSEMTEI---KLRPSNEITIIMMCGLQGAGKTTTA 119
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
AKLA K +GK +LVA DVYRPAAI QL + GE+VGVPV+ G KP IAK ++
Sbjct: 120 AKLAYQFKNKGKKPLLVACDVYRPAAIKQLQVNGEKVGVPVFAMGDNNKPLDIAKAAVQH 179
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
A K N+++V +DTAGRL +D+ MM+EL ++K L+ +L VD+MTGQ+A + TTFN
Sbjct: 180 AAKNNINLVFLDTAGRLHVDEDMMNELAEIKENLDIAYTILTVDSMTGQDAVNVATTFND 239
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
+IGI G ILTKLDGD+RGGAALS+K V+GKPI G GE++ DLEPFYPDRMA RILGMG
Sbjct: 240 KIGIDGVILTKLDGDTRGGAALSIKAVTGKPILYSGMGEKLTDLEPFYPDRMASRILGMG 299
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
DV S +EKAQ + +E A+EM++K A+FDFNDFL Q + +MG M ++ M+PGM
Sbjct: 300 DVESLIEKAQSAIDEEKAKEMEQKFRKASFDFNDFLDQMAQLEQMGGMQEILSMMPGMAS 359
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
V E + K +A++ +MTP ER + + SP R+KR+A +G V++ +
Sbjct: 360 -QMKNVEIDENAAKTPKAIVLSMTPRERSLQDPI--SPSRKKRIADGAGVQIADVNRFLK 416
Query: 501 QLFQMRVRMKNLMGVMEG 518
Q Q + MK + G+M G
Sbjct: 417 QFEQSKKMMKQMSGMMGG 434
>gi|119357327|ref|YP_911971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
gi|119354676|gb|ABL65547.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
Length = 449
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/437 (49%), Positives = 293/437 (67%), Gaps = 5/437 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEA + KL G+ T+ + NI MRDI+RALL ADV+ V ++ V + E+++
Sbjct: 1 MFDNLSDKLEATFKKLAGQATINEINIGIAMRDIKRALLNADVNYKVAKKLVDDIREKSL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAK 202
G +++ V P Q +VKIV DEL LMGGE L + K P +I++AGLQG GKTT AK
Sbjct: 61 GEQVLKSVSPAQMIVKIVNDELTDLMGGEHQPLNLSPKKLPAIIMVAGLQGSGKTTFCAK 120
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LA LKK GK+ MLVA DVYRPAA+DQL LGEQV VPV++ E + A +GLE A+
Sbjct: 121 LAKRLKKNGKNPMLVAADVYRPAAVDQLRTLGEQVDVPVFSI-DEQDAMKAAVKGLEAAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGRLQID+ MM E + +K L P E+L VVD+M GQEA FN +
Sbjct: 180 LAAKDVVIIDTAGRLQIDEKMMAEAEALKHALKPDELLFVVDSMMGQEAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS+++V KPIK + GE+++DL+ FYPDRMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDARGGAALSIRQVVEKPIKFISVGEKVDDLDLFYPDRMAQRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+SFVEKAQE + E EMQKK+M FD NDF Q + + +MGS+ +I M+PG+ K+
Sbjct: 300 VSFVEKAQETLDLEKTLEMQKKLMKNEFDLNDFFDQLQQLKKMGSIQGLISMVPGLNKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
P Q E K +EAMI +MT +E+ PE++ S RR+R+A+ SG Q+V+ L+ Q
Sbjct: 360 PKQEIE-NLDFKPIEAMINSMTKQEKTNPEIINGS--RRQRIAKGSGTRVQEVNMLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGG 519
+M+ M+++ + + G
Sbjct: 417 GEMKKMMRSVTKLSQSG 433
>gi|374323436|ref|YP_005076565.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
gi|357202445|gb|AET60342.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
Length = 458
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/447 (45%), Positives = 307/447 (68%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L++ L+ ++KL+G+ ++++++ + MR++R ALLEADV+ VV+ F+ V E++VG
Sbjct: 3 FEGLSTRLQNVFSKLRGKGKVSEDDVAQAMREVRLALLEADVNFKVVKDFIAKVKEKSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L A PTVI++ GLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL +LGEQ+ PV+T G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNHRPLLVAGDIYRPAAIKQLQVLGEQINAPVFTLGDQTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+EL+ + +NP EVLLVVD+MTGQ+A + FN + +
Sbjct: 183 GNDYVIIDTAGRLHVDEELMEELRQIHANVNPDEVLLVVDSMTGQDAVNVAEHFNTSLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ +EPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMG +
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ V+ +K + +EA++ +MT +E++ P+++ S RRKR+A SG + +V++L+ Q
Sbjct: 363 KDVKVDDKQMGRIEAIVHSMTTQEKQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG AL L+
Sbjct: 421 EMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|418005311|ref|ZP_12645306.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
gi|410547240|gb|EKQ21477.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
Length = 478
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/445 (47%), Positives = 305/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
L+ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 AELLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|422410043|ref|ZP_16487004.1| signal recognition particle protein [Listeria monocytogenes FSL
F2-208]
gi|313608187|gb|EFR84220.1| signal recognition particle protein [Listeria monocytogenes FSL
F2-208]
Length = 450
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIAAPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDAEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|30021933|ref|NP_833564.1| signal recognition particle protein [Bacillus cereus ATCC 14579]
gi|218235010|ref|YP_002368646.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218898998|ref|YP_002447409.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228902348|ref|ZP_04066505.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|228909670|ref|ZP_04073493.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228922599|ref|ZP_04085899.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228940933|ref|ZP_04103492.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228954121|ref|ZP_04116150.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960061|ref|ZP_04121725.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228973862|ref|ZP_04134438.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980452|ref|ZP_04140762.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|229071343|ref|ZP_04204566.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|229111316|ref|ZP_04240869.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|229129121|ref|ZP_04258094.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|229152044|ref|ZP_04280239.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|229162781|ref|ZP_04290738.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|229180121|ref|ZP_04307465.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|365159378|ref|ZP_09355559.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|384187905|ref|YP_005573801.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402558829|ref|YP_006601553.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|410676219|ref|YP_006928590.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|423359119|ref|ZP_17336622.1| signal recognition particle protein [Bacillus cereus VD022]
gi|423385348|ref|ZP_17362604.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|423412350|ref|ZP_17389470.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|423425981|ref|ZP_17403012.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|423431865|ref|ZP_17408869.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|423437300|ref|ZP_17414281.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|423503478|ref|ZP_17480070.1| signal recognition particle protein [Bacillus cereus HD73]
gi|423528294|ref|ZP_17504739.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|423561749|ref|ZP_17538025.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|423582055|ref|ZP_17558166.1| signal recognition particle protein [Bacillus cereus VD014]
gi|423585746|ref|ZP_17561833.1| signal recognition particle protein [Bacillus cereus VD045]
gi|423628938|ref|ZP_17604687.1| signal recognition particle protein [Bacillus cereus VD154]
gi|423635384|ref|ZP_17611037.1| signal recognition particle protein [Bacillus cereus VD156]
gi|423641074|ref|ZP_17616692.1| signal recognition particle protein [Bacillus cereus VD166]
gi|423649708|ref|ZP_17625278.1| signal recognition particle protein [Bacillus cereus VD169]
gi|423656704|ref|ZP_17632003.1| signal recognition particle protein [Bacillus cereus VD200]
gi|434376948|ref|YP_006611592.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|449090786|ref|YP_007423227.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200284|ref|YP_007480365.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29897489|gb|AAP10765.1| Signal recognition particle, subunit Ffh/SRP54 [Bacillus cereus
ATCC 14579]
gi|218162967|gb|ACK62959.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218540894|gb|ACK93288.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228603330|gb|EEK60807.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|228620663|gb|EEK77532.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|228631393|gb|EEK88027.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|228654358|gb|EEL10223.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|228672092|gb|EEL27383.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|228711797|gb|EEL63749.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|228779272|gb|EEM27529.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|228785887|gb|EEM33890.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228799577|gb|EEM46530.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805687|gb|EEM52277.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228818769|gb|EEM64835.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228837028|gb|EEM82369.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849959|gb|EEM94790.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228857317|gb|EEN01820.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|326941614|gb|AEA17510.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363625376|gb|EHL76417.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084991|gb|EJP93237.1| signal recognition particle protein [Bacillus cereus VD022]
gi|401104418|gb|EJQ12395.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|401110728|gb|EJQ18627.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|401116621|gb|EJQ24459.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|401120455|gb|EJQ28251.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|401202006|gb|EJR08871.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|401212934|gb|EJR19675.1| signal recognition particle protein [Bacillus cereus VD014]
gi|401233092|gb|EJR39588.1| signal recognition particle protein [Bacillus cereus VD045]
gi|401268483|gb|EJR74531.1| signal recognition particle protein [Bacillus cereus VD154]
gi|401278135|gb|EJR84071.1| signal recognition particle protein [Bacillus cereus VD156]
gi|401280135|gb|EJR86057.1| signal recognition particle protein [Bacillus cereus VD166]
gi|401282988|gb|EJR88885.1| signal recognition particle protein [Bacillus cereus VD169]
gi|401290445|gb|EJR96139.1| signal recognition particle protein [Bacillus cereus VD200]
gi|401635404|gb|EJS53159.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|401787481|gb|AFQ13520.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|401875505|gb|AFQ27672.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|402451957|gb|EJV83776.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|402458832|gb|EJV90572.1| signal recognition particle protein [Bacillus cereus HD73]
gi|409175348|gb|AFV19653.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|449024543|gb|AGE79706.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452105677|gb|AGG02617.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 449
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|306825356|ref|ZP_07458696.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432294|gb|EFM35270.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 523
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HDVIDTLNPAQQIIKIVDEELTAILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|157692277|ref|YP_001486739.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
gi|157681035|gb|ABV62179.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
Length = 446
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/436 (48%), Positives = 319/436 (73%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTQLMGGEESKIAVAKKSPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + M+VA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMMVAADIYRPAAIQQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID+ +MDEL+ VK V NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHHDYVILDTAGRLHIDEELMDELQKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK GE+++ +EPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + Q+ A+E+++K+ + +F +DFL+Q V MG + +I M+PG GK+
Sbjct: 303 TLIEKAQANVDQDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I++MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNVQVDEKQLNHIEAIIKSMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|450002251|ref|ZP_21825979.1| signal recognition particle protein [Streptococcus mutans N29]
gi|449183368|gb|EMB85352.1| signal recognition particle protein [Streptococcus mutans N29]
Length = 516
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/438 (46%), Positives = 301/438 (68%), Gaps = 9/438 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEGG 519
Q + K + GVM GG
Sbjct: 420 FNQAK---KMMQGVMSGG 434
>gi|217964047|ref|YP_002349725.1| signal recognition particle protein [Listeria monocytogenes HCC23]
gi|386008573|ref|YP_005926851.1| signal recognition particle protein [Listeria monocytogenes L99]
gi|386027180|ref|YP_005947956.1| signal recognition particle subunit SRP54 [Listeria monocytogenes
M7]
gi|217333317|gb|ACK39111.1| signal recognition particle protein [Listeria monocytogenes HCC23]
gi|307571383|emb|CAR84562.1| signal recognition particle protein [Listeria monocytogenes L99]
gi|336023761|gb|AEH92898.1| signal recognition particle, subunit SRP54 [Listeria monocytogenes
M7]
Length = 450
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 305/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVLKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV+ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFFLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDAEKMKAMEQKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 AEMKKMMKQM 430
>gi|338811281|ref|ZP_08623506.1| signal recognition particle protein [Acetonema longum DSM 6540]
gi|337276750|gb|EGO65162.1| signal recognition particle protein [Acetonema longum DSM 6540]
Length = 449
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/447 (48%), Positives = 301/447 (67%), Gaps = 6/447 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + +L+G L++ ++ E +R++R ALLEADV+ VV+ FV V E+A+
Sbjct: 2 VFEGLADKLQDTFKRLRGRGKLSETDVSEALREVRMALLEADVNFKVVKDFVSRVKERAI 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ+VKIV DEL LMGG S L + PTVI+L GLQG GKTT + KL
Sbjct: 62 GQEVMDSLTPGQQVVKIVYDELAALMGGTQSRLNISSRPPTVIMLVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L++Q K +LVA DVYRPAAI QL +LG+Q+ +PV+T G + P IA++ +++A
Sbjct: 122 ANLLQRQNKRPLLVAADVYRPAAIKQLQVLGQQLDIPVFTLGDQESPVTIAQKSIDQANA 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +M EL+ +K P E+LLVVDAMTGQ+A + FN ++G
Sbjct: 182 LLRDVVIIDTAGRLHINEELMQELRLIKGQAKPHEILLVVDAMTGQDAVGVAEAFNGQLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V+G PIK G GE+++ LEPFYPDRMA RILGMGDVL
Sbjct: 242 LDGVILTKLDGDARGGAALSIKAVTGCPIKFAGMGEKLDALEPFYPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+EKAQ + + A E++KK+ +F F+DFL+Q + V ++GSM +++ MIPGMG
Sbjct: 302 GLIEKAQASLDLDKARELEKKLRKDSFTFDDFLEQLQQVRKLGSMEQILSMIPGMGS-QL 360
Query: 444 AQVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q++ A EK LK EA+I +MT +ER+ P L+ S RRKR+A SG Q V++L+
Sbjct: 361 KQLKNAELDEKDLKRTEAIIRSMTKKERQDPALINGS--RRKRIASGSGTKVQDVNRLLK 418
Query: 501 QLFQMRVRMKNLMGVMEGGSLPALSNL 527
Q + R MK + + G P NL
Sbjct: 419 QFEETRKMMKRFQLMQKSGRKPKGFNL 445
>gi|436840520|ref|YP_007324898.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432169426|emb|CCO22794.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 508
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 294/424 (69%), Gaps = 4/424 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L A+ KG+ L ++NI MR++R ALLEADV+ VV+ FV+ V E+A+
Sbjct: 1 MFDSLSDRLSEAFKNFKGQGRLDEKNIQAGMREVRLALLEADVNYKVVKDFVERVKERAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P QQL+K+V DEL +L+GGE L F K + + I++ GLQG GKTT SAK+
Sbjct: 61 GQEVQKSLSPGQQLIKVVNDELTELLGGEQEGLNFTKGKLSKIMMVGLQGAGKTTSSAKI 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+++ LV D+YRPAAI+QL +LG+Q+ +PVY + TE+ P I + L +A++
Sbjct: 121 ALYLRRKKFKPYLVPADIYRPAAIEQLNVLGKQLDMPVYPSTTEMNPVDICRDALSKAEE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVV+ DTAGRL ID+ +MDEL +K P E+L V DAMTGQ+A + +TF+ ++G
Sbjct: 181 AGCDVVLFDTAGRLHIDETLMDELVSIKAACAPDEILFVADAMTGQDAVNVASTFDEKLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS+K V+GK +K VG GE++ +LE FYPDR A RILGMGDVL
Sbjct: 241 ITGVVLTKMDGDARGGAALSIKSVTGKAVKFVGMGEKLSELELFYPDRAASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ VM + +AE++ K A FD DF Q R + ++GSMS ++ MIPG+GK+T
Sbjct: 301 SLIEKAQSVMGEGEAEKLTDKFRKAQFDLEDFRTQMRRMKKIGSMSSIMKMIPGLGKLTK 360
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ +K L +EA+I +MT EER+KP+L+ +P RR+R+A+ SG Q+V+Q++
Sbjct: 361 QLGDIEVPDKELNRIEAIISSMTMEERKKPKLI--NPSRRQRIAKGSGVEVQEVNQMLKN 418
Query: 502 LFQM 505
QM
Sbjct: 419 FEQM 422
>gi|408789950|ref|ZP_11201587.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
gi|408520791|gb|EKK20821.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
Length = 479
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/440 (48%), Positives = 303/440 (68%), Gaps = 10/440 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A+ L+G+ +++ ++ MR++R ALL+ADV+ VVR+FV+ V EQA G
Sbjct: 3 FEGLSERLQTAFRNLRGKGKISEADLRSTMREVRLALLDADVNFAVVRKFVKQVEEQANG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ++KIV ++L ++MGG +EL A PT++++AGLQG GKTT KLA
Sbjct: 63 ENVLEGLNPGQQIIKIVDEQLTEMMGGATTELTTAPKIPTIVMMAGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK++ ++ +L+A DVYRPAAI+QL +G Q+ VPV+ GT+V P QIA G++ A+
Sbjct: 123 RKLKQEKQARPLLIAADVYRPAAIEQLQQVGAQIDVPVFAEGTDVDPVQIAIDGVKAAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V +DTAGRLQID ++MDELK +K ++PT+ LLVVDAMTGQ A FN +
Sbjct: 183 NHNDYVFIDTAGRLQIDDSLMDELKKIKAAVHPTDTLLVVDAMTGQNAVQTAEGFNDALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS+K V+GKPI G+GE++ DL+ F+PDRMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIKAVTGKPILYTGQGEKLADLDVFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEK Q+ + ++ A ++ +KI +FDF+DF+ Q + RMGS+ +IGMIPGM P
Sbjct: 303 SLVEKTQQTIDEKKARQLNEKIKENSFDFDDFVDQLEQLQRMGSIKDLIGMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V L ++A+I +MT +ERE P+LL +P RR+R+A+ S + Q V++L+ Q
Sbjct: 362 ALKNVDMDPHELDKIKAIIYSMTNQERENPDLL--NPSRRRRIARGSAQPIQTVNRLIKQ 419
Query: 502 LFQMRVRMKNL----MGVME 517
+M+ M + MG ME
Sbjct: 420 FNEMKKMMNQVSNGNMGGME 439
>gi|414158376|ref|ZP_11414670.1| signal recognition particle protein [Streptococcus sp. F0441]
gi|417794291|ref|ZP_12441549.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|334270135|gb|EGL88542.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|410870921|gb|EKS18878.1| signal recognition particle protein [Streptococcus sp. F0441]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HDVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|450063749|ref|ZP_21845104.1| signal recognition particle protein [Streptococcus mutans NLML5]
gi|449204410|gb|EMC05207.1| signal recognition particle protein [Streptococcus mutans NLML5]
Length = 516
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMAGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|239826589|ref|YP_002949213.1| signal recognition particle protein [Geobacillus sp. WCH70]
gi|239806882|gb|ACS23947.1| signal recognition particle protein [Geobacillus sp. WCH70]
Length = 446
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ NK++G+ +T+ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLSERLQNVMNKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVLKSLTPGQQVIKVVKEELTELMGGEQSKIAVASRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+K+ + +L A D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKRYNRKPLLAAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +MDELK +K V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDETLMDELKQMKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A F DFL+Q V ++G + ++ M+PG KI
Sbjct: 303 TLIEKAQAAVDEEKAKELEQKMRTATFTLEDFLEQLGQVRKLGPLDEILKMLPGANKIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I +MT EE+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 363 LNNLQIDEKQISRVEAIIRSMTKEEKMHPEIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|15903209|ref|NP_358759.1| signal recognition particle protein [Streptococcus pneumoniae R6]
gi|116515651|ref|YP_816611.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|421266304|ref|ZP_15717185.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
gi|15458797|gb|AAK99969.1| Signal recognition particle (Fifty four homolog) [Streptococcus
pneumoniae R6]
gi|116076227|gb|ABJ53947.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|395867520|gb|EJG78643.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + ++VA D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMVAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|423395854|ref|ZP_17373055.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|423406730|ref|ZP_17383879.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
gi|401653596|gb|EJS71140.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|401660020|gb|EJS77503.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
Length = 449
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK + P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|385261944|ref|ZP_10040059.1| signal recognition particle protein [Streptococcus sp. SK643]
gi|385191685|gb|EIF39097.1| signal recognition particle protein [Streptococcus sp. SK643]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQV 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + Q+ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDQQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAVGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|418002277|ref|ZP_12642398.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
gi|410544439|gb|EKQ18765.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
Length = 478
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 305/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARLLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|405760752|ref|YP_006701348.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
gi|404277641|emb|CCM08183.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|402846973|ref|ZP_10895282.1| signal recognition particle protein [Porphyromonas sp. oral taxon
279 str. F0450]
gi|402267665|gb|EJU17060.1| signal recognition particle protein [Porphyromonas sp. oral taxon
279 str. F0450]
Length = 449
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 304/445 (68%), Gaps = 6/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALLEADV+ V ++F + V E+A+
Sbjct: 1 MFENLSERLERSFKILKGEGKITELNVAETLKDVRRALLEADVNYNVAKKFTEDVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ VRP + +VKIV DEL LMGG+ +EL P +IL++GLQG GKTT S KL
Sbjct: 61 GQDVLTAVRPGELMVKIVHDELANLMGGKAAELNLT-GMPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK KQGK MLVAGDVYRPAAI+QL +L Q+ VPV+ P IA++G+ EA
Sbjct: 120 ANLLKTKQGKKPMLVAGDVYRPAAIEQLRVLAGQLDVPVFFDLDSKDPVSIARRGVAEAM 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVI+DTAGRL +D+ MM E++++KR + P+E L VVD+MTGQ+A TFN +
Sbjct: 180 GQGCDVVIIDTAGRLAVDEEMMREIEEIKRAIRPSETLFVVDSMTGQDAVNTAKTFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+M+ L+ F+PDRMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVDKPIKFVGMGEKMDALDVFHPDRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ++ + +A+ ++++I FDFNDFL Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQQLYDEREAKRLEERIAKDQFDFNDFLAQIQQIKKMGNIKDLAAMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EAMI +MTPEER KP +L RRKR+A SG + Q V++L+ Q
Sbjct: 360 -KDIDIKDDAFKSIEAMIYSMTPEERAKPHILDGH--RRKRIALGSGTSVQDVNKLLTQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q R MK L G +GG +P + +
Sbjct: 417 TQTRKMMKTLQG-FKGGKMPKMPKI 440
>gi|242373529|ref|ZP_04819103.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
M23864:W1]
gi|242348892|gb|EES40494.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
M23864:W1]
Length = 455
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++ K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSERLQSTMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPMLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVPPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+A+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRDSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|228992573|ref|ZP_04152500.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
gi|228998621|ref|ZP_04158208.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|229006121|ref|ZP_04163809.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228755197|gb|EEM04554.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228761089|gb|EEM10048.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|228767207|gb|EEM15843.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
Length = 449
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 308/435 (70%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKVEREHPEIINAS--RKKRIAKGSGTTVQEINRLLK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFEDMKKMMKTMTGM 433
>gi|414160540|ref|ZP_11416806.1| signal recognition particle protein [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878060|gb|EKS25949.1| signal recognition particle protein [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 455
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 311/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ F++ VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKIRGKGKVTEADIKAMMREVRLALLEADVNFKVVKSFIKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVKDELTQLMGGENATVNMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVA D+YRPAAIDQL +G+Q+ +PVY+ G +V+P QI L+ AK+
Sbjct: 123 LLMRKKYNKKPLLVAADIYRPAAIDQLQTVGKQLDIPVYSEGDQVQPQQIVDNALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M+EL +VK + P E++LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHLDFVIIDTAGRLHIDEKLMNELAEVKELSKPNEIMLVVDAMTGQDAVNVAQSFDDQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK +G E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRSVTQKPIKFIGVSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + + A++++KK+ +A+F +DFL+Q V +G + ++ MIPGMGK+
Sbjct: 303 SLIEKAQQDVDESKAKDLEKKMRTASFTLDDFLEQLDQVKNLGPLDEIMKMIPGMGKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MT ERE+PE+L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 MDKLNMSDKQIDHIKAIIQSMTLAERERPEILNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|417849418|ref|ZP_12495339.1| signal recognition particle protein [Streptococcus mitis SK1080]
gi|339456296|gb|EGP68888.1| signal recognition particle protein [Streptococcus mitis SK1080]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVNERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|387786156|ref|YP_006251252.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449908233|ref|ZP_21793580.1| signal recognition particle protein [Streptococcus mutans OMZ175]
gi|379132557|dbj|BAL69309.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449263047|gb|EMC60481.1| signal recognition particle protein [Streptococcus mutans OMZ175]
Length = 516
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 363 LANVKVNEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|379705243|ref|YP_005203702.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374681942|gb|AEZ62231.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 519
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ M++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKEENARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+A+M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEALMQELRDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M +I MIPGM P
Sbjct: 303 TLIEKASQEYDEKRSMELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLIKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|401683368|ref|ZP_10815254.1| signal recognition particle protein [Streptococcus sp. BS35b]
gi|400187446|gb|EJO21640.1| signal recognition particle protein [Streptococcus sp. BS35b]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKITEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HDVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEMLLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|421238897|ref|ZP_15695463.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|421245173|ref|ZP_15701672.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
gi|395601334|gb|EJG61482.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|395608609|gb|EJG68702.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKMDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|336113783|ref|YP_004568550.1| signal recognition particle protein [Bacillus coagulans 2-6]
gi|335367213|gb|AEH53164.1| signal recognition particle protein [Bacillus coagulans 2-6]
Length = 447
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/437 (48%), Positives = 316/437 (72%), Gaps = 4/437 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +T+ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQGTMQKIRGKGKVTESDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGG S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QEVLKSLTPGQQVIKIVQEELTNLMGGSQSKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK ++ +LVA D+YRPAAI QL LG+Q+G+PV++ G ++ P +IA+Q +E+AK+
Sbjct: 123 NLLRKKYNRTPLLVAADIYRPAAIKQLETLGKQLGMPVFSLGDKISPVEIARQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +M+ELK++K + +P E+ LVVDAMTGQ+A + +FN ++G
Sbjct: 183 EHHDTVIIDTAGRLHIDSELMNELKEIKELAHPDEIFLVVDAMTGQDAVNVAQSFNDQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+ KPIK G GE+M+ LEPF+P+RMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTEKPIKFAGMGEKMDALEPFHPERMASRILGMGDIL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + +E A ++KK+ +F F DFL+Q V +MG + ++ MIPG ++
Sbjct: 303 SLIEKAQETVDEEKARALEKKMRDQSFTFEDFLEQLGQVRKMGPLGDILKMIPGANRMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I++MT +E+ +P+++ S R+KR+A+ SG+ Q+V++L+ Q
Sbjct: 363 MDNLQIDEKQIAHVEAIIQSMTKQEKIRPDIINAS--RKKRIAKGSGRPVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEGG 519
+M+ MK L G+ + G
Sbjct: 421 EEMKKMMKQLQGMNQKG 437
>gi|73662841|ref|YP_301622.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495356|dbj|BAE18677.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 455
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/430 (46%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQGTMQKIRGKGKVTEADIKLMMREVRLALLEADVNFKVVKDFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQEELTQLMGGENSTITMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAIDQL +G+Q+ +PVY+ G +VKP QI + ++ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAIDQLQTVGKQIDIPVYSEGDQVKPQQIVENAIKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL +D+A+M EL DVK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHVDEALMQELSDVKEITKPDEIMLVVDAMTGQDAVNVAQSFDEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + ++ A++++KK+ +++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDEDKAKDLEKKMRTSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 IDKLNMNEKQIDHIKAIIQSMTPSERNDPDTLNVS--RKKRIAKGSGRSVQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|257867539|ref|ZP_05647192.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257873868|ref|ZP_05653521.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257877619|ref|ZP_05657272.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325571330|ref|ZP_08146830.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|420262069|ref|ZP_14764712.1| signal recognition particle protein [Enterococcus sp. C1]
gi|257801595|gb|EEV30525.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257808032|gb|EEV36854.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257811785|gb|EEV40605.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325155806|gb|EGC68002.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|394771091|gb|EJF50875.1| signal recognition particle protein [Enterococcus sp. C1]
Length = 472
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KL+ + +++ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTERLQQAMSKLRRKGKVSEADVKEMMREIRLALLEADVNLQVVKEFTKNVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V ++ + P QQ+VKIV +EL K +G E + + PT+I++AGLQG GKTT + KLA
Sbjct: 63 VEVLESLSPAQQIVKIVDEELTKTLGSETVGIEKSPKIPTIIMMAGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L K + +++AGDVYRPAAIDQL +LG+Q+ VPV+ GT+V P +I +QGL A++
Sbjct: 123 NHLIKTENARPLMIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTDVSPVEIVRQGLALARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+ +M+ELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDENLMEELKQIKDLAQPNEILLVVDAMTGQDAVNVAESFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS+++V+G PIK G GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRQVTGAPIKFTGTGEKLTDLEVFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ +K+ +FDFNDF++Q V MG + ++ MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAQKMKENSFDFNDFVEQIDQVMGMGPIEDLLKMIPGMSQMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ K + +AM+ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 363 IENVKVDPKQIARQKAMVYSMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KESRKMMQQM 430
>gi|229552446|ref|ZP_04441171.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|258539816|ref|YP_003174315.1| signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|385835468|ref|YP_005873242.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|418070818|ref|ZP_12708093.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|421768780|ref|ZP_16205490.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|421771068|ref|ZP_16207729.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
gi|423078848|ref|ZP_17067525.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|229314183|gb|EEN80156.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|257151492|emb|CAR90464.1| Signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|355394959|gb|AER64389.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|357540238|gb|EHJ24255.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|357549136|gb|EHJ30984.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|411185629|gb|EKS52756.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|411186503|gb|EKS53627.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
Length = 478
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 306/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ ++ + MR+IR ALLEADV+ VV+ F++ V +AVG
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDVRDAMREIRLALLEADVNFDVVKTFIKNVRTKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 SEVLESLTPAQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + K+ +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KYLMENEKARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDTDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMTELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A+EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKTYDEKQAQEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPKEREDPDLL--NPSRRRRIAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|149007045|ref|ZP_01830714.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|168484497|ref|ZP_02709449.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|307127122|ref|YP_003879153.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|417677022|ref|ZP_12326431.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|417696476|ref|ZP_12345655.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|418091914|ref|ZP_12729056.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|418110258|ref|ZP_12747281.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|418112633|ref|ZP_12749633.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|418132098|ref|ZP_12768973.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|418155278|ref|ZP_12792007.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|418162345|ref|ZP_12799029.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|418166925|ref|ZP_12803581.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|418169309|ref|ZP_12805952.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|418219027|ref|ZP_12845694.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|418221339|ref|ZP_12847992.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|418225677|ref|ZP_12852305.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|418238848|ref|ZP_12865401.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422864|ref|ZP_13963079.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|419460118|ref|ZP_14000047.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|419462451|ref|ZP_14002357.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|419466686|ref|ZP_14006569.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|419488363|ref|ZP_14028116.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|419512634|ref|ZP_14052268.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|419516909|ref|ZP_14056525.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|419526022|ref|ZP_14065584.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|421272862|ref|ZP_15723704.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|421283435|ref|ZP_15734222.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
gi|147761349|gb|EDK68315.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|172042260|gb|EDT50306.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|306484184|gb|ADM91053.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|332074621|gb|EGI85095.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|332201751|gb|EGJ15821.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|353764014|gb|EHD44564.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|353782461|gb|EHD62895.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|353782995|gb|EHD63424.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|353807764|gb|EHD88033.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|353820656|gb|EHE00839.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|353827774|gb|EHE07923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|353830521|gb|EHE10651.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|353834494|gb|EHE14595.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|353874649|gb|EHE54503.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|353875682|gb|EHE55534.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|353880874|gb|EHE60688.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|353893250|gb|EHE72996.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379531123|gb|EHY96358.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|379531922|gb|EHY97155.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|379544809|gb|EHZ09953.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|379558282|gb|EHZ23318.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|379587390|gb|EHZ52238.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|379590478|gb|EHZ55316.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|379637104|gb|EIA01662.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|379638982|gb|EIA03526.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|395874516|gb|EJG85599.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|395881398|gb|EJG92447.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|194398377|ref|YP_002037890.1| signal recognition particle protein [Streptococcus pneumoniae G54]
gi|194358044|gb|ACF56492.1| signal recognition particle protein [Streptococcus pneumoniae G54]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEXLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|449931990|ref|ZP_21802581.1| signal recognition particle protein [Streptococcus mutans 3SN1]
gi|449161857|gb|EMB65027.1| signal recognition particle protein [Streptococcus mutans 3SN1]
Length = 516
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF+KQ V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIKQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|418094094|ref|ZP_12731221.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
gi|353764590|gb|EHD45138.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
Length = 523
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|24379497|ref|NP_721452.1| signal recognition particle protein [Streptococcus mutans UA159]
gi|449864523|ref|ZP_21778423.1| signal recognition particle protein [Streptococcus mutans U2B]
gi|449870470|ref|ZP_21780642.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449984811|ref|ZP_21819282.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|450081930|ref|ZP_21852033.1| signal recognition particle protein [Streptococcus mutans N66]
gi|26007034|sp|Q54431.3|SRP54_STRMU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|24377436|gb|AAN58758.1|AE014944_8 signal recognition particle protein subunit, Ffh [Streptococcus
mutans UA159]
gi|449156378|gb|EMB59847.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449179745|gb|EMB81936.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|449214694|gb|EMC14933.1| signal recognition particle protein [Streptococcus mutans N66]
gi|449264947|gb|EMC62280.1| signal recognition particle protein [Streptococcus mutans U2B]
Length = 516
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MGSM ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|418323809|ref|ZP_12935071.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
gi|365229155|gb|EHM70318.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
Length = 455
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/430 (46%), Positives = 310/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQQTMQKIRGKGKVTEADIKTMMREVRLALLEADVNFKVVKNFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQDELTQLMGGENATIQMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVA D+YRPAAIDQL +G+Q+ +PVY+ G +V+P I ++ AK+
Sbjct: 123 LLMRKKYNKKPLLVAADIYRPAAIDQLQTVGKQLDIPVYSEGDQVQPQDIVDHAIQHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL +D+A+M+EL++VK V P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHVDEALMNELQEVKEVSKPNEIMLVVDAMTGQDAVNVAESFDNQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++ LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VSSVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + +E A++++KK+ +++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDEEKAKDLEKKMRTSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MTP ERE P +L S R+KR+A+ SG+T Q+V++L+ Q
Sbjct: 363 LDKLNMSEKQIDHIKAIIQSMTPTERENPAVLNVS--RKKRIAKGSGRTLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK
Sbjct: 421 NEMKKMMKQF 430
>gi|449899617|ref|ZP_21791113.1| signal recognition particle protein [Streptococcus mutans R221]
gi|449258112|gb|EMC55708.1| signal recognition particle protein [Streptococcus mutans R221]
Length = 516
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MGSM ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|335030020|ref|ZP_08523519.1| signal recognition particle protein [Streptococcus infantis SK1076]
gi|334267482|gb|EGL85942.1| signal recognition particle protein [Streptococcus infantis SK1076]
Length = 521
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ +I E ++IR ALLEADV+LPVV+ F++ + E+A+G
Sbjct: 3 FENLTERLQNVFKNLRKKGKITESDIQEATKEIRLALLEADVALPVVKDFIKKIRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVNEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 HKLKKEEDARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNDQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MT EERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDEKQIARKRAIVSSMTSEERENPDLL--TPSRRRRIAAGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|225860882|ref|YP_002742391.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230784|ref|ZP_06964465.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254274|ref|ZP_06977860.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502715|ref|YP_003724655.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|387788081|ref|YP_006253149.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|418083186|ref|ZP_12720385.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|418085327|ref|ZP_12722509.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|418100317|ref|ZP_12737405.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|418119991|ref|ZP_12756942.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|418141847|ref|ZP_12778660.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|418150745|ref|ZP_12787492.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|418153004|ref|ZP_12789743.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|418157241|ref|ZP_12793957.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|418171136|ref|ZP_12807763.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|418195493|ref|ZP_12831973.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|418198091|ref|ZP_12834551.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|418223322|ref|ZP_12849963.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|419425283|ref|ZP_13965480.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|419427233|ref|ZP_13967416.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|419429411|ref|ZP_13969578.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|419436128|ref|ZP_13976218.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|419444532|ref|ZP_13984547.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|419446663|ref|ZP_13986668.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|419448892|ref|ZP_13988889.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|419451595|ref|ZP_13991581.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|419501991|ref|ZP_14041675.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|419519049|ref|ZP_14058655.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|419528669|ref|ZP_14068211.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|421287407|ref|ZP_15738173.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
gi|225728379|gb|ACO24230.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298238310|gb|ADI69441.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|353755262|gb|EHD35867.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|353757282|gb|EHD37876.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|353773026|gb|EHD53525.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|353789104|gb|EHD69500.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|353806098|gb|EHD86372.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|353814628|gb|EHD94851.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|353817555|gb|EHD97757.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|353823689|gb|EHE03863.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|353837306|gb|EHE17392.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|353862020|gb|EHE41953.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|353862729|gb|EHE42659.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|353879448|gb|EHE59274.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|379137823|gb|AFC94614.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|379551359|gb|EHZ16454.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|379564692|gb|EHZ29688.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|379572225|gb|EHZ37182.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|379600204|gb|EHZ64985.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|379614203|gb|EHZ78913.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|379615148|gb|EHZ79857.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|379618686|gb|EHZ83361.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|379619720|gb|EHZ84390.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|379623300|gb|EHZ87934.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|379623950|gb|EHZ88583.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|379640886|gb|EIA05424.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|395889816|gb|EJH00823.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|57866688|ref|YP_188386.1| signal recognition particle protein [Staphylococcus epidermidis
RP62A]
gi|242242520|ref|ZP_04796965.1| signal recognition particle protein [Staphylococcus epidermidis
W23144]
gi|418613018|ref|ZP_13176039.1| signal recognition particle protein [Staphylococcus epidermidis
VCU117]
gi|418626769|ref|ZP_13189365.1| signal recognition particle protein [Staphylococcus epidermidis
VCU126]
gi|418630376|ref|ZP_13192858.1| signal recognition particle protein [Staphylococcus epidermidis
VCU128]
gi|418634110|ref|ZP_13196508.1| signal recognition particle protein [Staphylococcus epidermidis
VCU129]
gi|420174994|ref|ZP_14681440.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM061]
gi|420177373|ref|ZP_14683709.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM057]
gi|420179856|ref|ZP_14686132.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM053]
gi|420189842|ref|ZP_14695801.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM037]
gi|420191715|ref|ZP_14697626.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM023]
gi|420204159|ref|ZP_14709719.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM015]
gi|420234397|ref|ZP_14738960.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051475]
gi|57637346|gb|AAW54134.1| signal recognition particle protein [Staphylococcus epidermidis
RP62A]
gi|242234028|gb|EES36340.1| signal recognition particle protein [Staphylococcus epidermidis
W23144]
gi|374817328|gb|EHR81513.1| signal recognition particle protein [Staphylococcus epidermidis
VCU117]
gi|374831313|gb|EHR95055.1| signal recognition particle protein [Staphylococcus epidermidis
VCU126]
gi|374837917|gb|EHS01475.1| signal recognition particle protein [Staphylococcus epidermidis
VCU128]
gi|374838102|gb|EHS01659.1| signal recognition particle protein [Staphylococcus epidermidis
VCU129]
gi|394244527|gb|EJD89869.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM061]
gi|394247757|gb|EJD92999.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM057]
gi|394252334|gb|EJD97371.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM053]
gi|394259957|gb|EJE04783.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM037]
gi|394265866|gb|EJE10513.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM023]
gi|394274173|gb|EJE18598.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM015]
gi|394304200|gb|EJE47607.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051475]
Length = 455
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDETLMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|229086398|ref|ZP_04218574.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
gi|228696914|gb|EEL49723.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
Length = 449
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 309/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKIEREQPEIINAS--RKKRIAKGSGTTVQEINRLLK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFEDMKKMMKTMTGM 433
>gi|15901147|ref|NP_345751.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|111658514|ref|ZP_01409180.1| hypothetical protein SpneT_02000341 [Streptococcus pneumoniae
TIGR4]
gi|148989312|ref|ZP_01820692.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|148998927|ref|ZP_01826362.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149002661|ref|ZP_01827593.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|168487456|ref|ZP_02711964.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|168491206|ref|ZP_02715349.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|168493207|ref|ZP_02717350.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|168575742|ref|ZP_02721657.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|221231975|ref|YP_002511127.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225859083|ref|YP_002740593.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|237649986|ref|ZP_04524238.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974]
gi|237821108|ref|ZP_04596953.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974M2]
gi|307067936|ref|YP_003876902.1| signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|387626577|ref|YP_006062752.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|415698973|ref|ZP_11457370.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|415749643|ref|ZP_11477587.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|415752329|ref|ZP_11479440.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|417679247|ref|ZP_12328644.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|417694199|ref|ZP_12343387.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|418074059|ref|ZP_12711315.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|418076430|ref|ZP_12713666.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|418078752|ref|ZP_12715975.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|418080725|ref|ZP_12717937.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|418086987|ref|ZP_12724157.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|418089661|ref|ZP_12726817.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|418098634|ref|ZP_12735733.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|418105354|ref|ZP_12742412.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|418114832|ref|ZP_12751820.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|418116996|ref|ZP_12753966.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|418121327|ref|ZP_12758271.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|418123542|ref|ZP_12760475.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|418128127|ref|ZP_12765022.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|418130445|ref|ZP_12767328.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|418135326|ref|ZP_12772182.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|418137312|ref|ZP_12774152.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|418144126|ref|ZP_12780926.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|418173647|ref|ZP_12810260.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|418178302|ref|ZP_12814886.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|418185094|ref|ZP_12821638.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|418187293|ref|ZP_12823819.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|418189519|ref|ZP_12826034.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|418193898|ref|ZP_12830389.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|418202524|ref|ZP_12838954.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|418216716|ref|ZP_12843439.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418230027|ref|ZP_12856630.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|419434387|ref|ZP_13974504.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|419440491|ref|ZP_13980539.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|419455667|ref|ZP_13995625.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|419457671|ref|ZP_13997615.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|419464590|ref|ZP_14004482.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|419469124|ref|ZP_14008995.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|419471210|ref|ZP_14011069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|419473327|ref|ZP_14013178.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|419477943|ref|ZP_14017767.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|419482318|ref|ZP_14022109.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|419491172|ref|ZP_14030911.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|419504064|ref|ZP_14043733.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|419509866|ref|ZP_14049510.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|419530027|ref|ZP_14069558.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|419532478|ref|ZP_14071994.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|419534761|ref|ZP_14074262.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|421211352|ref|ZP_15668335.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|421213342|ref|ZP_15670299.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|421215585|ref|ZP_15672506.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|421232027|ref|ZP_15688670.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|421234261|ref|ZP_15690881.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|421243217|ref|ZP_15699736.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|421247544|ref|ZP_15704030.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|421249572|ref|ZP_15706030.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|421270711|ref|ZP_15721566.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|421275004|ref|ZP_15725834.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|421279062|ref|ZP_15729869.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|421281247|ref|ZP_15732045.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|421285241|ref|ZP_15736018.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|421289884|ref|ZP_15740635.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|421298726|ref|ZP_15749414.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|421305204|ref|ZP_15755860.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|421307600|ref|ZP_15758243.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|421313744|ref|ZP_15764334.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444382017|ref|ZP_21180222.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
gi|444384538|ref|ZP_21182632.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|14972772|gb|AAK75391.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|147755237|gb|EDK62289.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147759272|gb|EDK66265.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|147925290|gb|EDK76369.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|183569731|gb|EDT90259.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|183574503|gb|EDT95031.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|183576649|gb|EDT97177.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|183578377|gb|EDT98905.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|220674435|emb|CAR68988.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225720844|gb|ACO16698.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|301794362|emb|CBW36790.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|306409473|gb|ADM84900.1| Signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|332073626|gb|EGI84105.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|332203136|gb|EGJ17204.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|353747943|gb|EHD28599.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|353749131|gb|EHD29781.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|353749559|gb|EHD30203.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|353753265|gb|EHD33889.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|353759248|gb|EHD39834.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|353761659|gb|EHD42225.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|353769994|gb|EHD50510.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|353777419|gb|EHD57892.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|353786345|gb|EHD66758.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|353789357|gb|EHD69752.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|353793229|gb|EHD73598.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|353796888|gb|EHD77226.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|353799558|gb|EHD79876.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|353801769|gb|EHD82069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|353809867|gb|EHD90127.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|353838464|gb|EHE18542.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|353845076|gb|EHE25119.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|353849413|gb|EHE29419.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|353851449|gb|EHE31444.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|353856661|gb|EHE36630.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|353859118|gb|EHE39073.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|353868327|gb|EHE48217.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|353872308|gb|EHE52174.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353887549|gb|EHE67327.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|353901303|gb|EHE76847.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|353901474|gb|EHE77016.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|379531544|gb|EHY96778.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|379537624|gb|EHZ02806.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|379545926|gb|EHZ11065.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|379547227|gb|EHZ12365.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|379552834|gb|EHZ17923.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|379564109|gb|EHZ29106.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|379565379|gb|EHZ30371.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|379574767|gb|EHZ39705.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|379575771|gb|EHZ40701.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|379578631|gb|EHZ43540.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|379579858|gb|EHZ44755.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|379593308|gb|EHZ58121.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|379606262|gb|EHZ71011.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|379606741|gb|EHZ71488.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|379628801|gb|EHZ93403.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|379633059|gb|EHZ97628.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|381310025|gb|EIC50858.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|381316497|gb|EIC57245.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|381317937|gb|EIC58662.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|395573310|gb|EJG33901.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|395579574|gb|EJG40072.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|395579792|gb|EJG40287.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|395595656|gb|EJG55886.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|395601209|gb|EJG61358.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|395608805|gb|EJG68897.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|395613916|gb|EJG73941.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|395614365|gb|EJG74386.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|395867840|gb|EJG78960.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|395874115|gb|EJG85203.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|395879674|gb|EJG90731.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|395882408|gb|EJG93455.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|395887220|gb|EJG98235.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|395889125|gb|EJH00136.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|395902682|gb|EJH13615.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|395905866|gb|EJH16771.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|395907513|gb|EJH18404.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|395914244|gb|EJH25088.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444252298|gb|ELU58762.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|444253616|gb|ELU60071.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|340622252|ref|YP_004740704.1| hypothetical protein Ccan_14810 [Capnocytophaga canimorsus Cc5]
gi|339902518|gb|AEK23597.1| Fifty-four-like protein [Capnocytophaga canimorsus Cc5]
Length = 446
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 290/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSEKLDKALHVLKGHGQITEINVAETLKEVRRALLDADVNYKIAKDFTNKVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV+DEL +LMGG+ + + + P++IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTNLHPGQLMIKIVKDELTELMGGDAAGVNLS-GNPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAIDQL I+GEQ+G+ V++ P IA + L+ AK
Sbjct: 120 ANFLKNKKHKKPLLVACDVYRPAAIDQLHIVGEQIGIEVFSDRGNNNPVDIALKALQHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+V+IVDTAGRL +D+ MMDE+ ++ + LNP E L VVDAMTGQ+A FN +
Sbjct: 180 SNGFNVMIVDTAGRLAVDQQMMDEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDVFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL Q + + +MGSM ++GM+PG+GK
Sbjct: 300 ISLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLAQIQQIKKMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ + K +EA+I +MTP ER P L+ S R++R+A+ SG+ Q+V+QL+ Q
Sbjct: 360 K-DLDISDDAFKHIEAIIYSMTPSERSNPALIDAS--RKRRIAKGSGRDVQEVNQLLKQF 416
>gi|289168093|ref|YP_003446362.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
gi|288907660|emb|CBJ22497.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFAGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|421190065|ref|ZP_15647369.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
gi|421192045|ref|ZP_15649314.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399969992|gb|EJO04298.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399970865|gb|EJO05155.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
Length = 507
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 298/450 (66%), Gaps = 10/450 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS ++ A L G+ +++ ++ E +R+IR ALLEADV+L R F++ V ++A+G
Sbjct: 3 FENLTSRIQTAMKTLSGKGKVSETDLDETLREIRLALLEADVNLKTARNFIKQVRDKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P +Q+VKIV D+L +MG + L + PTVI++AGLQG GKTT AKLA
Sbjct: 63 AKVLEGLNPSEQVVKIVNDQLTAMMGEKAVPLNKSSKIPTVIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK + + +L+A DVYRPAAI+QL LG+Q+ +PV+ G P +I + GL++A++
Sbjct: 123 NRLKDENHARPLLIAADVYRPAAIEQLKSLGDQLSIPVFDEGVGENPRKIVEDGLKQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD++++ P E+LL VDAMTGQ A FN +G
Sbjct: 183 NKNDYVFIDTAGRLQIDQVLMQELKDIEKMAEPDEILLTVDAMTGQNATETARGFNDALG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ ++ A E +K+ FDFNDFL+Q + + MG M ++ MIPGM P
Sbjct: 303 SLIEKTQKDFDEKQASEQLQKLQENTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
AQ + K MEA++ +MTP ER PELL +P RR+R+A SG+ V++L+ Q
Sbjct: 362 AMAQAQIGPKDFSHMEAIVYSMTPGERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNLEDAL 531
QMR M G LPA +ED L
Sbjct: 420 FKQMRQMMYKFTN--GKGGLPA--GMEDML 445
>gi|307706752|ref|ZP_07643557.1| signal recognition particle protein [Streptococcus mitis SK321]
gi|307617837|gb|EFN96999.1| signal recognition particle protein [Streptococcus mitis SK321]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|171779410|ref|ZP_02920374.1| hypothetical protein STRINF_01255 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282027|gb|EDT47458.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 519
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ M++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKEENARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+A+M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEALMQELRDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M +I MIPGM P
Sbjct: 303 TLIEKASQEYDEKRSMELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLIKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|449015603|dbj|BAM79005.1| signal recognition particle SRP54 homolog ffh [Cyanidioschyzon
merolae strain 10D]
Length = 608
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/521 (42%), Positives = 330/521 (63%), Gaps = 26/521 (4%)
Query: 22 YNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETWGLINSKSVTIRRNGRRRLIVR 81
+ + S G S + S+W S D A +++ RE ++ R
Sbjct: 32 FGPQASTGCSFRHKSAWLGSYDRAGIATARVLHLEREQVAFRRFHAL---RGSPHGFAGT 88
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQ 141
+F LT + + L+G + +T+ NI ++++RRAL++ADV++ VV + A+ EQ
Sbjct: 89 RMLFEALTENFQRSLAALRGLDKITETNIEPTLKEVRRALIDADVNVKVVDILLAAIKEQ 148
Query: 142 AVGVGLIRGVRPDQQLVKIVRDELVKLMGGE------------VSELVFAKSRPTVILLA 189
A+ + +++GV P QQ VKIV DEL++L+GG+ + L + ++PTVIL+A
Sbjct: 149 ALNMKVVKGVTPGQQFVKIVYDELIRLLGGDPATSSSKAGASPLPALAESPTKPTVILMA 208
Query: 190 GLQGVGKTTVSAKLANYL---KKQGKSCMLVAGDVYRPAAIDQLVILGEQ----VGVPVY 242
GLQG GKTT SAKLA L K+ K +LVA DV RPAA++QL LG+Q V +P
Sbjct: 209 GLQGAGKTTQSAKLARLLQTEKRSRKKVLLVAADVQRPAAVEQLQTLGQQIETEVFIPAM 268
Query: 243 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLV 302
V ++A + L+ AK+K D +IVDTAGR ID+ +M+EL+ +KRVL+P E+LLV
Sbjct: 269 VGTGSVTALEVATRALDYAKQKAFDFMIVDTAGRQVIDERLMEELQQIKRVLSPAEILLV 328
Query: 303 VDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 362
VD M GQEAA + F+ IGITGAILTK+DGD+RGGAALS+K++SG PIK +G GE+++
Sbjct: 329 VDGMIGQEAANITRAFHERIGITGAILTKMDGDTRGGAALSIKQISGAPIKFIGVGEKLD 388
Query: 363 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTV 422
LE FYPDRMA RILGMGD+++ VE+AQE + +++AE++ +K++ A FDFNDFL+QTR V
Sbjct: 389 KLEKFYPDRMASRILGMGDIITLVERAQEAVDEKEAEQLARKMLEARFDFNDFLRQTRFV 448
Query: 423 ARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLA---ESP 478
MGS + V+ ++PG+ G + Q+R EK L++ E++I +MTP ER P+LL +
Sbjct: 449 RSMGSFAGVLKLLPGVSGMLKEDQLRAGEKRLRLAESVINSMTPRERANPDLLTVDKTAA 508
Query: 479 VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 519
R +R+A+ SG++ +QV L+ MR M + M GG
Sbjct: 509 SRMRRIARGSGRSLEQVESLMRDFVNMRNVMAQMSRRMMGG 549
>gi|386337727|ref|YP_006033896.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
gi|334280363|dbj|BAK27937.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
Length = 521
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQGVGKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGVGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K + +++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKDENARPLMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEKLMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|418975192|ref|ZP_13523101.1| signal recognition particle protein [Streptococcus oralis SK1074]
gi|383348563|gb|EID26522.1| signal recognition particle protein [Streptococcus oralis SK1074]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +T+ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKITEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HDVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEMLLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|418974258|ref|ZP_13522176.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383345430|gb|EID23554.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKVLAQPNEILLVVDAMIGQEAANVAHEFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|229025286|ref|ZP_04181706.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|423389848|ref|ZP_17367074.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
gi|423418248|ref|ZP_17395337.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|228736039|gb|EEL86614.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|401106521|gb|EJQ14482.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|401641939|gb|EJS59656.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
Length = 449
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 310/435 (71%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK++ G+
Sbjct: 419 QFDDMKKMMKSMTGM 433
>gi|365925209|ref|ZP_09447972.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420266516|ref|ZP_14768978.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|394425212|gb|EJE98212.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
Length = 477
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/446 (46%), Positives = 305/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +A+G
Sbjct: 3 FEGLTERLQNAIGKLRKKGKISEADVREVMREIRLALLEADVNFQVVKDFVKTVRTRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV DEL K+MG E EL + PT+I++ GLQG GKTT KLA
Sbjct: 63 AEVLESLTPAQQIVKIVNDELTKVMGEEAVELNKSDKIPTIIMMVGLQGAGKTTTLGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + +++A D+YRPAAIDQL ILG+ + VPV++ GT+V P +I ++GLE A +
Sbjct: 123 LKLKNEKNARPLMIAADIYRPAAIDQLEILGKSIDVPVFSMGTDVSPVEIVRKGLELAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRLQID+ +MDEL +K + P E+LL VDAMTGQ A + FN ++
Sbjct: 183 KKNDYVLIDTAGRLQIDELLMDELAQIKTLAQPDEILLTVDAMTGQNAVEVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M DL+ FYPDRM+ RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRSVTGKPIKFIGQGEKMTDLDVFYPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ A++MQ+K+ +FDFNDF+ Q V +MG M +I MIPGM P
Sbjct: 303 TLIEKAQQDFDEKKAQQMQEKMRENSFDFNDFIDQMEQVQKMGPMEDIIKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ K + ++A++ +MT EERE P+L +P RR+R+A SG+ +V++++ Q
Sbjct: 362 AIKNLKVNPKDIDHLKAVVYSMTNEERENPDLF--NPSRRRRIAAGSGRPIHEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
+ MK +MG + G+ + +
Sbjct: 420 FNE----MKKMMGKVSKGNFEGMEGM 441
>gi|418977558|ref|ZP_13525374.1| signal recognition particle protein [Streptococcus mitis SK575]
gi|383349745|gb|EID27667.1| signal recognition particle protein [Streptococcus mitis SK575]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|373458227|ref|ZP_09549994.1| signal recognition particle protein [Caldithrix abyssi DSM 13497]
gi|371719891|gb|EHO41662.1| signal recognition particle protein [Caldithrix abyssi DSM 13497]
Length = 441
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 294/420 (70%), Gaps = 6/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M +LTS LE+ + +L+G LT++NI + +++IRRALLEADV+ VV+ FV +V ++AV
Sbjct: 1 MLEELTSKLESTFRRLRGYGKLTEKNIADSLKEIRRALLEADVNYKVVKDFVASVQKKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++R V P Q +VKIV DE+V+L+GG + L A PT+I+L GLQG GKTT +AKL
Sbjct: 61 GEEVLRSVTPGQMIVKIVHDEMVRLLGGTTATLKTAGIPPTIIMLVGLQGSGKTTFAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A YL+K+ + +LVA DVYRPAAI QL ILG + VPVY G P +IA + A++
Sbjct: 121 AKYLQKKNRKPLLVAADVYRPAAIQQLKILGRSINVPVYEEGIG-DPVKIAFNAISYARQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+D +I+DTAGRL ID+ MM+EL +K+ + P E+L V D MTGQ+A + F +
Sbjct: 180 HMLDTIILDTAGRLHIDEQMMEELVKIKKRIRPHEILFVADGMTGQDAVNTASQFAERLN 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTK+DGD+RGGAALS+K ++GKPIK +G GE++ED+E F+PDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKMDGDARGGAALSIKAITGKPIKFMGVGEKLEDIEQFHPDRMASRILGMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KIT 442
+ VEKAQE + QE A ++++K+ A FD DFL Q + + +MGS+ ++ MIPG+G ++
Sbjct: 300 TLVEKAQETIDQEKAAKLEQKLRKAEFDLEDFLDQLQQIKKMGSLESILRMIPGVGSQLK 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
AQV EK+L +EA+I +MT EER P++L S RRKR+A SG Q V+QL+ Q
Sbjct: 360 NAQV--DEKNLVRVEAIINSMTKEERRNPKILNGS--RRKRIAMGSGTRVQDVNQLMRQF 415
>gi|417312813|ref|ZP_12099525.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|418227845|ref|ZP_12854463.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|419438363|ref|ZP_13978433.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|421236406|ref|ZP_15693004.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
gi|327389521|gb|EGE87866.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|353882073|gb|EHE61885.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|379538368|gb|EHZ03549.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|395602251|gb|EJG62394.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|417923660|ref|ZP_12567119.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|418966824|ref|ZP_13518531.1| signal recognition particle protein [Streptococcus mitis SK616]
gi|342836725|gb|EGU70934.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|383346269|gb|EID24329.1| signal recognition particle protein [Streptococcus mitis SK616]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|149012344|ref|ZP_01833413.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|169832782|ref|YP_001694736.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225854751|ref|YP_002736263.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|303261607|ref|ZP_07347554.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|303267279|ref|ZP_07353142.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|303268434|ref|ZP_07354229.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|387759487|ref|YP_006066465.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|418096377|ref|ZP_12733490.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|418139654|ref|ZP_12776480.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|418148686|ref|ZP_12785451.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|418160014|ref|ZP_12796713.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|418180682|ref|ZP_12817252.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|418182902|ref|ZP_12819462.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|418200008|ref|ZP_12836453.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|419514852|ref|ZP_14054477.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|419521248|ref|ZP_14060843.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|421220436|ref|ZP_15677280.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|421222746|ref|ZP_15679532.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|421296167|ref|ZP_15746878.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
gi|147763670|gb|EDK70605.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|168995284|gb|ACA35896.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225723340|gb|ACO19193.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|301802076|emb|CBW34809.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|302637187|gb|EFL67675.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|302642040|gb|EFL72392.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|302643206|gb|EFL73490.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|353769381|gb|EHD49899.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|353813361|gb|EHD93594.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|353821747|gb|EHE01923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|353845384|gb|EHE25426.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|353849043|gb|EHE29053.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|353865055|gb|EHE44964.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|353905127|gb|EHE80566.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|379538548|gb|EHZ03728.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|379635401|gb|EHZ99959.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|395587552|gb|EJG47899.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|395587808|gb|EJG48150.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|395896040|gb|EJH07008.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKSLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|116490535|ref|YP_810079.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290889938|ref|ZP_06553024.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|419757833|ref|ZP_14284158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|419857504|ref|ZP_14380210.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
gi|419858985|ref|ZP_14381642.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|421184274|ref|ZP_15641698.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|421187982|ref|ZP_15645323.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|421193206|ref|ZP_15650457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|421194499|ref|ZP_15651719.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|421197348|ref|ZP_15654525.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|116091260|gb|ABJ56414.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290480380|gb|EFD89018.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|399905342|gb|EJN92785.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|399966655|gb|EJO01175.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|399967558|gb|EJO02031.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|399973188|gb|EJO07374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|399975576|gb|EJO09627.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|399977917|gb|EJO11888.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|410497346|gb|EKP88820.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|410497768|gb|EKP89237.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
Length = 507
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 298/450 (66%), Gaps = 10/450 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS ++ A L G+ +++ ++ E +R+IR ALLEADV+L R F++ V ++A+G
Sbjct: 3 FENLTSRIQTAMKTLSGKGKVSETDLDETLREIRLALLEADVNLKTARNFIKQVRDKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P +Q+VKIV D+L +MG + L + PTVI++AGLQG GKTT AKLA
Sbjct: 63 AKVLEGLNPSEQVVKIVNDQLTAMMGEKAVPLNKSSKIPTVIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK + + +L+A DVYRPAAI+QL LG+Q+ +PV+ G P +I + GL++A++
Sbjct: 123 NRLKDENHARPLLIAADVYRPAAIEQLKSLGDQLSIPVFDEGVGENPRKIVEDGLKQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD++++ P E+LL VDAMTGQ A FN +G
Sbjct: 183 NKNDYVFIDTAGRLQIDQVLMQELKDIEKMAEPDEILLTVDAMTGQNATETARGFNDALG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ ++ A E +K+ FDFNDFL+Q + + MG M ++ MIPGM P
Sbjct: 303 SLIEKTQKDFDEKQASEQLQKLQENTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
AQ + K MEA++ +MTP ER PELL +P RR+R+A SG+ V++L+ Q
Sbjct: 362 AMAQAQIGPKDFSHMEAIVYSMTPGERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNLEDAL 531
QMR M G LPA +ED L
Sbjct: 420 FKQMRQMMYKFTN--GKGGLPA--GMEDML 445
>gi|306829387|ref|ZP_07462577.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
gi|304428473|gb|EFM31563.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|409122949|ref|ZP_11222344.1| signal recognition particle protein [Gillisia sp. CBA3202]
Length = 442
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 290/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRAL+EADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDNALHILKGHGQITEVNVAETLKEVRRALVEADVNYKIAKEFTSTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL +LMGGEV E+ + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTALKPGQLMVKLVKDELTQLMGGEVEEIDLS-GNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K+ +LVA D+YRPAAI+QL I+GEQ+GV V++ P I+K + AK
Sbjct: 120 ANFLKTKKNKNPLLVACDIYRPAAINQLQIVGEQIGVEVFSDVGNQDPVAISKAAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL +D+AMM E+ ++ + P E L VVD+MTGQ+A FN +
Sbjct: 180 QNGFNVVIIDTAGRLAVDEAMMTEIANIHTAIKPEETLFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFLKQ + +MGSM ++GMIPG GK+
Sbjct: 300 VSLVERAQEQYDEEEARKLQKKIAKNQFGFDDFLKQLHQIKKMGSMKDLLGMIPGAGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P ++ + VR+KR+A SG + QQV+QL+ Q
Sbjct: 360 K-DIDIDDDAFKHVEAIIYSMTPAERSTPTII--NAVRKKRIAGGSGTSVQQVNQLLKQF 416
>gi|419442690|ref|ZP_13982718.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
gi|379551991|gb|EHZ17082.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKSLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|270292853|ref|ZP_06199064.1| signal recognition particle protein [Streptococcus sp. M143]
gi|270278832|gb|EFA24678.1| signal recognition particle protein [Streptococcus sp. M143]
Length = 523
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|402298804|ref|ZP_10818465.1| signal recognition particle protein [Bacillus alcalophilus ATCC
27647]
gi|401726012|gb|EJS99267.1| signal recognition particle protein [Bacillus alcalophilus ATCC
27647]
Length = 452
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/430 (46%), Positives = 308/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++++I E MR++R ALLEADV+ VV++F+ +V E+A+G
Sbjct: 3 FEGLAERLQGTLTKIRGKGKVSEQDIKEMMREVRLALLEADVNFKVVKQFIASVKEKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V +EL LMGGE S++ PTV+++ GLQG GKTT +AKLA
Sbjct: 63 QEVMKSLTPGQQVIKVVNEELTALMGGEQSKIAVNNKPPTVVMMVGLQGAGKTTTTAKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KK ++ MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NHLRKKHNRNPMLVAADIYRPAAIKQLETLGKQLSMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +MDEL+ VK + P E+LLVVDAMTGQ+A + +FN ++
Sbjct: 183 EHHDYVLIDTAGRLHIDEKLMDELQQVKEIAKPDEILLVVDAMTGQDAVNVAESFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAA+SVK V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VTGVVLTKLDGDTRGGAAISVKAVTNTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A E++KK+ + + F+DFL Q V MG + ++ M+PGM K+
Sbjct: 303 TLIEKAQMNVDEEKARELEKKMKNMDITFDDFLDQLDQVRNMGPLDELLNMMPGMNKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ +K + +EA++ +MTP E++ P ++ S R++R+A+ SG + Q+V++L+ Q
Sbjct: 363 MKDLKVDDKQIGHVEAIVRSMTPMEKQDPSIMNAS--RKRRIAKGSGTSIQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 DEMKKMMKQM 430
>gi|347534366|ref|YP_004841036.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504422|gb|AEN99104.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 479
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/446 (47%), Positives = 307/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+S L+ A+ KL+G+ +T+ ++ MR+IR ALL+ADV+ VVR FV+ V +A G
Sbjct: 3 FEGLSSKLQEAFRKLRGKGQITEADLRSTMREIRLALLDADVNFTVVRDFVKKVQAKAKG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ++KIV DEL ++MGGE + L + PT+I++AGLQG GKTT KLA
Sbjct: 63 ENVLEGLNPGQQIIKIVDDELTEMMGGETTTLKKSNKIPTIIMMAGLQGAGKTTTVGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK+ + +++A DVYRPAAI+QL +G+Q+ VPV+ GTEV P +I + GL+ AK+
Sbjct: 123 KMLKEDDNARPLMIAADVYRPAAIEQLQQIGKQIDVPVFEEGTEVNPVKIVEDGLKVAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V +DTAGRLQID+ +M+ELK++K V PT++LLVVDAMTGQ A + FN +
Sbjct: 183 NHNDYVFIDTAGRLQIDEKLMNELKEIKEVAKPTDILLVVDAMTGQNAVNMAEGFNEALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS+K V+GKPI G+GE+M++L+ F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIKAVTGKPILFTGQGEKMDNLDVFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEK ++ + ++ + E+ +K+ F+F+DFL Q + + MG + ++ MIPGM P
Sbjct: 303 SLVEKTKKNIDEKKSMELAEKMKENTFNFDDFLDQLQQIQNMGPLKNLMAMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K L ++A+I +MT EERE P++L +P RR+R+A+ S + Q V++L+ Q
Sbjct: 362 ALQNVDMDPKDLDRIKAIIYSMTNEERENPDVL--NPSRRRRIAKGSAQPIQSVNRLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M + G++ + N+
Sbjct: 420 FNQ----MKKMMNQISNGNMSGMENM 441
>gi|424780553|ref|ZP_18207426.1| Signal recognition particle, subunit Ffh SRP54 [Catellicoccus
marimammalium M35/04/3]
gi|422842955|gb|EKU27402.1| Signal recognition particle, subunit Ffh SRP54 [Catellicoccus
marimammalium M35/04/3]
Length = 478
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 305/440 (69%), Gaps = 8/440 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KLK + +++ ++ E MR+IR ALL+ADVS VV+ F + VSE+AVG
Sbjct: 3 FESLTERLQQAMSKLKRKGKISQSDVKEMMREIRMALLDADVSYKVVKDFTKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL K++G E L + PT+I++ GLQG GKTT + KLA
Sbjct: 63 SEVLESLSPSQQIVKIVDEELTKVLGEETVPLNKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK+ K+ +L+AGDVYRPAAIDQL +GE + VPV+ GTEV P +I +QGLE A +
Sbjct: 123 NDLKQNQKARPLLIAGDVYRPAAIDQLKTVGEMIDVPVFELGTEVSPVEIVRQGLELAHE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D VI+DTAGRL ID+A+M ELK++K + P E+LL VDAM+GQ+A + +FN ++
Sbjct: 183 KKNDYVIIDTAGRLHIDEALMTELKEIKELAQPDEILLTVDAMSGQDAVNVAESFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK VG GE+M +E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGTGEKMNAIEVFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KA + ++ A E+ +K+ + FDFNDF++Q + MG + +I MIPGM +I
Sbjct: 303 TLIDKASKEFDEKKALEVTEKMRANTFDFNDFIEQLDQMMNMGPLEDLIKMIPGMSQIPG 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
E + K + AMI +MT EER+ P+LL +P RR+R+A+ SG +E +V++++ Q
Sbjct: 363 MNNIEIDHKEIARKRAMILSMTEEERQNPDLL--NPSRRRRIARGSGNSEIEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLP 522
Q R +M M G++P
Sbjct: 421 KQSR----KMMSDMTKGNMP 436
>gi|342163605|ref|YP_004768244.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
gi|341933487|gb|AEL10384.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
Length = 523
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|449982402|ref|ZP_21818256.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|450004868|ref|ZP_21826331.1| signal recognition particle protein [Streptococcus mutans NMT4863]
gi|449174874|gb|EMB77332.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|449189437|gb|EMB91104.1| signal recognition particle protein [Streptococcus mutans NMT4863]
Length = 516
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|418008198|ref|ZP_12648066.1| signal recognition particle subunit [Lactobacillus casei UW4]
gi|410547142|gb|EKQ21380.1| signal recognition particle subunit [Lactobacillus casei UW4]
Length = 478
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 305/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDIAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|422419418|ref|ZP_16496373.1| signal recognition particle protein, partial [Listeria seeligeri
FSL N1-067]
gi|313632786|gb|EFR99746.1| signal recognition particle protein [Listeria seeligeri FSL N1-067]
Length = 427
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/406 (50%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 109 NIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKL 168
++ E MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL L
Sbjct: 4 DVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVGTDVMKSLTPGQQVIKIVQEELTNL 63
Query: 169 MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAI 227
MGGE S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI
Sbjct: 64 MGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAI 123
Query: 228 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 287
QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDEL
Sbjct: 124 KQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDEL 183
Query: 288 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 347
K VK + NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V
Sbjct: 184 KQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSV 243
Query: 348 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 407
+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+
Sbjct: 244 TGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKD 303
Query: 408 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPE 466
+ +DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT
Sbjct: 304 NSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKN 363
Query: 467 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 512
E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 364 EKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 407
>gi|421186068|ref|ZP_15643463.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
gi|399967712|gb|EJO02178.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
Length = 507
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 298/450 (66%), Gaps = 10/450 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LTS ++ A L G+ +++ ++ E +R+IR ALLEADV+L R F++ V ++A+G
Sbjct: 3 FENLTSRIQTAMKTLSGKGKVSETDLDETLREIRLALLEADVNLKTARNFIKQVRDKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P +Q+VKIV D+L +MG + L + PTVI++AGLQG GKTT AKLA
Sbjct: 63 AKVLEGLNPSEQVVKIVNDQLTAMMGEKAVPLNKSSKIPTVIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK + + +L+A DVYRPAAI+QL LG+Q+ +PV+ G P +I + GL++A++
Sbjct: 123 NRLKDENHARPLLIAADVYRPAAIEQLKSLGDQLSIPVFDEGVGENPRKIIEDGLKQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD++++ P E+LL VDAMTGQ A FN +G
Sbjct: 183 NKNDYVFIDTAGRLQIDQVLMQELKDIEKMAEPDEILLTVDAMTGQNATETARGFNDALG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ ++ A E +K+ FDFNDFL+Q + + MG M ++ MIPGM P
Sbjct: 303 SLIEKTQKDFDEKQASEQLQKLQENTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
AQ + K MEA++ +MTP ER PELL +P RR+R+A SG+ V++L+ Q
Sbjct: 362 AMAQAQIGPKDFSHMEAIVYSMTPGERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNLEDAL 531
QMR M G LPA +ED L
Sbjct: 420 FKQMRQMMYKFTN--GKGGLPA--GMEDML 445
>gi|417940238|ref|ZP_12583526.1| signal recognition particle protein [Streptococcus oralis SK313]
gi|343389119|gb|EGV01704.1| signal recognition particle protein [Streptococcus oralis SK313]
Length = 523
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|417848493|ref|ZP_12494438.1| signal recognition particle protein [Streptococcus mitis SK1073]
gi|339452707|gb|EGP65330.1| signal recognition particle protein [Streptococcus mitis SK1073]
Length = 523
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|307704985|ref|ZP_07641872.1| signal recognition particle protein [Streptococcus mitis SK597]
gi|307621436|gb|EFO00486.1| signal recognition particle protein [Streptococcus mitis SK597]
Length = 523
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|319939112|ref|ZP_08013476.1| signal recognition particle GTPase [Streptococcus anginosus
1_2_62CV]
gi|319812162|gb|EFW08428.1| signal recognition particle GTPase [Streptococcus anginosus
1_2_62CV]
Length = 516
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 304/439 (69%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ G +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEGARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPTERENPDLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQVMQ---GVMSG 433
>gi|257124951|ref|YP_003163065.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
gi|257048890|gb|ACV38074.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
Length = 446
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/427 (48%), Positives = 296/427 (69%), Gaps = 2/427 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L + + K+ G+ LT+ N+ + +R++R ALLEADV+ V + FV + E+A+
Sbjct: 1 MFNNLGDRFKDIFKKVSGQGKLTENNMKDALREVRLALLEADVNYSVAKNFVAKIREKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ VKIV DELV+++GG + A PT+++L+GLQG GKTT S KL
Sbjct: 61 GEQVISGVNPTQQFVKIVNDELVEVLGGSNVSIAKADKNPTIVMLSGLQGAGKTTFSGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+ +G+ L+ DVYRPAA QL +LGEQV VPV+T + P +I KQG+E +K
Sbjct: 121 AKHLRSKGEKPFLIGADVYRPAAKKQLKVLGEQVKVPVFTIDESIDPLEIVKQGIEASKT 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ VI+DTAGRL ID+ +M EL+D+K NP E+LLVVD MTGQ+A + FN ++
Sbjct: 181 EHATYVIIDTAGRLHIDEQLMHELQDIKDCFNPNEILLVVDGMTGQDAVNVAKEFNEQLD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALSVKEV+GKPIK + GE+++D+ PF+PDR+A RILGMGDV+
Sbjct: 241 ITGVVLTKLDGDTRGGAALSVKEVAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + +++A++M++K FDF DFLKQ + + +MGS++ ++ MIPG+ +
Sbjct: 301 SLVEKAQEAIDEKEAKKMEEKFRKNQFDFEDFLKQFKMIRKMGSIAGIMKMIPGV-DTSM 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I +MT +ER P+LL R+ R+A+ SG V++L+ Q
Sbjct: 360 IDMGMAEKEMKKVEAIIFSMTVQERRDPKLLKNGS-RKMRIAKGSGVQVNDVNKLIKQFE 418
Query: 504 QMRVRMK 510
QM+ MK
Sbjct: 419 QMKQMMK 425
>gi|402834421|ref|ZP_10883023.1| signal recognition particle protein [Selenomonas sp. CM52]
gi|402278039|gb|EJU27105.1| signal recognition particle protein [Selenomonas sp. CM52]
Length = 456
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/423 (49%), Positives = 293/423 (69%), Gaps = 6/423 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KL+G LT++++ E MR++R ALLEADV+ VV+ F++ V E+AV
Sbjct: 2 IFESLADRLQQTFKKLRGHGKLTEDDVNEAMREVRMALLEADVNFKVVKDFIKKVKERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q +VKIV +EL +LMGG S L + PTVI++AGLQG GKTT + KL
Sbjct: 62 GQDVLDTLTPAQVVVKIVDEELTELMGGTQSRLNISSVPPTVIMMAGLQGAGKTTSAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKKQGK +LVA D+YRPAA+ QL +LGEQ+G+PV++ IA+ +E A+
Sbjct: 122 GLSLKKQGKKPLLVAADIYRPAAVKQLQVLGEQLGIPVFSMPQGTDAVTIARSSIEHARS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL ID+ +M ELKD+K + P E+LLVVDAMTGQ+A + +FN +G
Sbjct: 182 HINDVVIIDTAGRLHIDEKLMQELKDIKADVKPHEILLVVDAMTGQDAVNVAESFNEGLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALSVK V+G PIK VG GE++E LEPF+PDRMA RILGMGDVL
Sbjct: 242 IDGVVLTKLDGDARGGAALSVKAVTGCPIKFVGMGEKLEALEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---- 439
S +EKAQ E+A++M+KK+ A+F +DFL Q + V ++GS +++GMIPGMG
Sbjct: 302 SLIEKAQSTFDAEEAKKMEKKLRKADFTLDDFLAQMQKVRKLGSFEQILGMIPGMGGLKK 361
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
++ + K ++ +EA+I++MTP+ER ++ S RRKR+A SG Q V++L+
Sbjct: 362 QLQGQDIDLNGKEVRRIEAIIKSMTPKERADISIINGS--RRKRIALGSGTRVQDVNKLL 419
Query: 500 AQL 502
Q
Sbjct: 420 KQF 422
>gi|225856949|ref|YP_002738460.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444388157|ref|ZP_21186147.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444389599|ref|ZP_21187514.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444391435|ref|ZP_21189266.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444395136|ref|ZP_21192682.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444397742|ref|ZP_21195225.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444400272|ref|ZP_21197683.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444402805|ref|ZP_21199956.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444405746|ref|ZP_21202601.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444407359|ref|ZP_21204026.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444410666|ref|ZP_21207190.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444413067|ref|ZP_21209383.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444414317|ref|ZP_21210599.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444417461|ref|ZP_21213498.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444419251|ref|ZP_21215129.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444422413|ref|ZP_21218069.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
gi|225725114|gb|ACO20966.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444250307|gb|ELU56788.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444256062|gb|ELU62400.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444258455|gb|ELU64777.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444260399|gb|ELU66707.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444265804|gb|ELU71793.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444265854|gb|ELU71840.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444266821|gb|ELU72753.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444270955|gb|ELU76706.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444272373|gb|ELU78090.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444273226|gb|ELU78899.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444276885|gb|ELU82417.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444282616|gb|ELU87869.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444283732|gb|ELU88918.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444287298|gb|ELU92231.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444288242|gb|ELU93140.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
Length = 523
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPNLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|418327699|ref|ZP_12938841.1| signal recognition particle protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|365232729|gb|EHM73715.1| signal recognition particle protein [Staphylococcus epidermidis
14.1.R1.SE]
Length = 455
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMIGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDETLMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|452974499|gb|EME74319.1| signal recognition particle protein [Bacillus sonorensis L12]
Length = 446
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/436 (48%), Positives = 316/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ +T++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQKTISKIRGKGKVTEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVKEELTELMGGEESKIAAAKRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK ++ +LVA D+YRPAAI QL LG Q+ +PV++ G +V P IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRNPLLVAADIYRPAAIKQLETLGRQLDMPVFSLGDQVSPVDIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRL ID+ +MDELK VK P E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 DHHDYVIIDTAGRLHIDEELMDELKKVKETSQPDEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VTGVILTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V MG + +I M+PG GK+
Sbjct: 303 TLIEKAQANVDEEKAKELEQKMKTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I++MT +E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNVKVDEKQLSHVEAIIKSMTGKEKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 EEMKKMMKQMTNMTKG 436
>gi|307708829|ref|ZP_07645291.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
gi|307615195|gb|EFN94406.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
Length = 523
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVDIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNTQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|320546729|ref|ZP_08041040.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
gi|320448608|gb|EFW89340.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
Length = 521
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+ K+ M++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKEEKARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTHGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+A+M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEALMQELRDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGIVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKRSMELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|418014537|ref|ZP_12654133.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
gi|410553585|gb|EKQ27587.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
Length = 478
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/445 (47%), Positives = 304/445 (68%), Gaps = 12/445 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQNNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRV--------RMKNLMGVMEGG 519
Q + MK L G+M GG
Sbjct: 421 NQSKQMMNQMSKGNMKGLDGLMGGG 445
>gi|358464807|ref|ZP_09174765.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
gi|357066336|gb|EHI76486.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
Length = 523
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|114567018|ref|YP_754172.1| signal recognition particle protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337953|gb|ABI68801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 448
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/429 (49%), Positives = 299/429 (69%), Gaps = 4/429 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + KL+G+ + +E+I MR++R ALLEADV+ VV+ FV+ V ++A+G
Sbjct: 3 FEGLSDRLQDIFKKLRGKGKIGEEDIKTAMREVRLALLEADVNFKVVKDFVERVRQRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V DE+ LMGG S+L A P++ +L GLQG GKTT AKL
Sbjct: 63 QEVLQSLTPGQQIIKVVHDEMTALMGGSESKLTLAAKPPSIYMLVGLQGAGKTTTVAKLG 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L +QG+ +LVAGD+YRPAAI QL +LGEQVG+PV++ G + P IA+ LE A+ +
Sbjct: 123 RNLLRQGRRPVLVAGDIYRPAAIKQLQVLGEQVGIPVFSMG-QSNPVDIARASLEYARSQ 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N D+VI+DTAGRL I++ +MDELK +K +NP E+LLVVDAMTGQ+A + +FN ++G+
Sbjct: 182 NRDIVILDTAGRLHINEELMDELKQIKSAINPHEILLVVDAMTGQDAVNVAESFNRDLGL 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALSVK V+G PIK VG GE+++ LE F+PDRMA RILGMGD+LS
Sbjct: 242 TGVILTKLDGDTRGGAALSVKAVTGCPIKYVGMGEKLDALETFFPDRMASRILGMGDILS 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
VEKAQ + QE A EM++KI F DFL+Q + V MG + ++GMIPG+GK
Sbjct: 302 LVEKAQANIDQEKAREMERKIRKQEFTLEDFLEQMQQVRSMGPLDELLGMIPGIGKQMKG 361
Query: 445 QVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
E E+ + +EA+I++MT +ER ++ S R+KR+A+ SG Q+V++L+ Q
Sbjct: 362 FKGEFDEREILRIEAIIKSMTLQERRDTSIINGS--RKKRIARGSGTKVQEVNRLLKQFE 419
Query: 504 QMRVRMKNL 512
+ R MK
Sbjct: 420 ESRKLMKQF 428
>gi|389573280|ref|ZP_10163355.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
gi|388426977|gb|EIL84787.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
Length = 447
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 316/430 (73%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVMQSLTPGQQVIKVVKEELTELMGGEESKIAVAKKSPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + M+VA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMMVAADIYRPAAIQQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID+ +MDEL+ VK V NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHHDYVILDTAGRLHIDEDLMDELQKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK GE+++ +EPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + Q+ A+E+++K+ + +F +DFL+Q V MG + +I M+PG GK+
Sbjct: 303 TLIEKAQANVDQDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I++MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNVQVDEKQLNHIEAIIKSMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 DEMKKMMKQM 430
>gi|419495553|ref|ZP_14035271.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|421206749|ref|ZP_15663804.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|421229925|ref|ZP_15686592.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|421292199|ref|ZP_15742934.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|421303453|ref|ZP_15754117.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|421312131|ref|ZP_15762734.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
gi|379595635|gb|EHZ60443.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|395575546|gb|EJG36114.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|395594457|gb|EJG54693.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|395892327|gb|EJH03318.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|395902075|gb|EJH13011.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|395910560|gb|EJH21432.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
Length = 523
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|259503527|ref|ZP_05746429.1| signal recognition particle protein [Lactobacillus antri DSM 16041]
gi|259168605|gb|EEW53100.1| signal recognition particle protein [Lactobacillus antri DSM 16041]
Length = 480
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 301/446 (67%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFTVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL KLMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAAHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + M +A DVYRPAAI QL + Q+ VPV+ GT+V P +I ++G+E AK+
Sbjct: 123 LRLKNEDHARPMFIAADVYRPAAITQLQQVAAQIDVPVFEKGTDVDPVEIVREGMEVAKQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K +++P E+LLV+D+MTGQ A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELVHPDEILLVIDSMTGQNAVNTAQGFDDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+M DL+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMSDLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E K+ FD+NDFL Q V +MG + ++ M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K ++A++ +MTP ERE P+L+ +P RR+R+A SG+ +V++++ Q
Sbjct: 362 ALKNVNLDPKQFAHIKAIVLSMTPAERENPDLM--NPSRRRRLAAGSGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR MK + G++ + NL
Sbjct: 420 FNQMRKMMKQV----TNGNMSGMQNL 441
>gi|409997447|ref|YP_006751848.1| signal recognition particle protein [Lactobacillus casei W56]
gi|406358459|emb|CCK22729.1| Signal recognition particle protein [Lactobacillus casei W56]
Length = 479
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 305/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 4 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 63
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 64 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 123
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 124 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 183
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 184 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 243
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 244 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 303
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 304 TLIDKAQKNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 363
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 364 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 421
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 422 NQ----SKQMMNQMSKGNMKGLDGL 442
>gi|374997111|ref|YP_004972610.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
gi|357215477|gb|AET70095.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
Length = 453
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/429 (49%), Positives = 302/429 (70%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LKG+ L +E++ E MR++R ALLEADV+ VV+ FV V E+ +
Sbjct: 1 MFQGLSEKLQETFKRLKGKGKLKEEDVNEAMREVRVALLEADVNFKVVKDFVAKVKERCI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +E+++LMGG +++ A PTVILL GLQG GKTT +AKL
Sbjct: 61 GQEVLESLSPAQQVIKIVHEEMIELMGGASGKILIASKPPTVILLLGLQGAGKTTHAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LGEQ+ VPV++ G E P++IA+ + A +
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLQVLGEQIKVPVFSMGHE-DPTKIAQASIVHANQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +M EL+++K + P E+LLVVDAMTGQ+A + +F+ E+G
Sbjct: 180 NGQDVVIIDTAGRLHINEELMTELREIKSAVKPHEILLVVDAMTGQDAVNVAQSFHSELG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGG ALS+K V+G IK VG GE+M+ +E F+PDRMA RILGMGDVL
Sbjct: 240 LDGVILTKLDGDTRGGGALSIKAVTGCTIKFVGIGEKMDAIEAFHPDRMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE Q+ A+EM++K+ F +DFL Q + + +MG +S ++ MIPG+GK
Sbjct: 300 TLIEKAQESFDQKKAKEMEEKLRKHEFTLDDFLDQMQQMKKMGPLSSILEMIPGVGK-QL 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V+ EK +EA+I +MT EER KP ++ +S R+KR+A+ SG + Q V +L+ Q
Sbjct: 359 KDVQIDEKDTARVEAIIRSMTKEERRKPVIIKDS--RKKRIAKGSGTSVQDVGRLIKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|191638588|ref|YP_001987754.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227534903|ref|ZP_03964952.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239631962|ref|ZP_04674993.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066648|ref|YP_003788671.1| signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|385820302|ref|YP_005856689.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|385823497|ref|YP_005859839.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|417980376|ref|ZP_12621056.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|417983618|ref|ZP_12624254.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|417986977|ref|ZP_12627539.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|417993117|ref|ZP_12633467.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|417996469|ref|ZP_12636748.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|417999336|ref|ZP_12639546.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|418011036|ref|ZP_12650805.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
gi|190712890|emb|CAQ66896.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227187659|gb|EEI67726.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239526427|gb|EEQ65428.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439055|gb|ADK18821.1| Signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|327382629|gb|AEA54105.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|327385824|gb|AEA57298.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|410524041|gb|EKP98958.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|410524699|gb|EKP99606.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|410527887|gb|EKQ02749.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|410532029|gb|EKQ06740.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|410535315|gb|EKQ09940.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|410539356|gb|EKQ13889.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|410553084|gb|EKQ27092.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
Length = 478
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 305/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|421490816|ref|ZP_15938183.1| signal recognition particle protein [Streptococcus anginosus
SK1138]
gi|400371813|gb|EJP24762.1| signal recognition particle protein [Streptococcus anginosus
SK1138]
Length = 516
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 304/439 (69%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ G +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEGARPLMIAADIYRPAAIDQLTTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVLSMTPTERENPDLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQVMQ---GVMSG 433
>gi|229031475|ref|ZP_04187475.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|229174511|ref|ZP_04302043.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|423401313|ref|ZP_17378486.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|423457972|ref|ZP_17434769.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|423477983|ref|ZP_17454698.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
gi|228609071|gb|EEK66361.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|228729764|gb|EEL80744.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|401148356|gb|EJQ55849.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|401654303|gb|EJS71846.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|402428145|gb|EJV60242.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
Length = 449
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 308/435 (70%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMTSLTPGQQVIKVVQEELTELMGGEQSKIAVANRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|315639588|ref|ZP_07894728.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
gi|315484549|gb|EFU75005.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
Length = 472
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 300/430 (69%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KL+ + +T+ ++ E MR+IR ALLEADV+L VV+ F + V E+AVG
Sbjct: 3 FESLTERLQQAMSKLRKKGKVTEADVKEMMREIRLALLEADVNLQVVKEFTKNVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL +G E + + PT+I++ GLQG GKTT + KLA
Sbjct: 63 AEVLDSLSPAQQIVKIVNEELTTTLGSETVGIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK + +++AGDVYRPAAIDQL +LG+Q+ VPV+ GT V P +I +QGL A +
Sbjct: 123 NRLKKTENARPLMIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTTVSPVEIVRQGLAVAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL +D+A+M+ELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHVDEALMEELKQIKELAQPNEILLVVDAMTGQDAVTVADSFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLDGD+RGGAALS++ V+G PIK G GE++ DLE F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVITKLDGDTRGGAALSIRSVTGAPIKFTGTGEKLTDLEIFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ KK+ +FDFNDF++Q V MG + ++ MIPGM ++
Sbjct: 303 TLIEKAQQDYDEKKAEELAKKMKENSFDFNDFIEQLDQVMSMGPLEDLMKMIPGMSQVPG 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K + +A++ +MTPEERE P+LL +P RR+R+A SG +V++++ Q
Sbjct: 363 MDNFKVDPKDIARKKAIVFSMTPEERENPDLL--NPSRRRRIAAGSGNNVVEVNRMIKQF 420
Query: 503 FQMRVRMKNL 512
+ R M+ +
Sbjct: 421 KEARTMMQKM 430
>gi|374337948|ref|YP_005094657.1| Signal recognition particle subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
gi|372284057|emb|CCF02297.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
Length = 521
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K + +++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKDENARPLMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEKLMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE PELL +P RR+R+A SG + +V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPELL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|417934365|ref|ZP_12577685.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
gi|340770935|gb|EGR93450.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
Length = 523
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|399926872|ref|ZP_10784230.1| signal recognition particle protein [Myroides injenensis M09-0166]
Length = 445
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 289/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ + ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTNKVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q ++KIV+DEL +LMGGE + + + P++IL++GLQG GKTT S KL
Sbjct: 61 GQDVLTTLQPGQLMIKIVKDELTQLMGGEAAGINLS-GNPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K+ +LVA DVYRPAAI+QL ++GEQ+GV VY+ P QIA+ ++ AK
Sbjct: 120 ANFLKTKKNKNVLLVACDVYRPAAINQLHVVGEQLGVEVYSEEGNNNPVQIAENAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM E+ ++ + P E L VVD+MTGQ+A FN +
Sbjct: 180 SNGFNVVIVDTAGRLAVDEEMMTEIANIHNAIKPHETLFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDIFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ +E+A ++QKKI F F+DFL Q + V +MGSM ++GMIPG+GK
Sbjct: 300 ISLVERAQAQYDEEEARKIQKKIAKNEFGFDDFLSQIQQVKKMGSMKDLVGMIPGVGK-A 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP ER KP LL R++R+A+ SG QQV+QL+ Q
Sbjct: 359 LKDVEIEDDAFKHIEAIIHSMTPAERSKPSLL--DAKRKQRIAKGSGTDIQQVNQLLKQF 416
>gi|379727454|ref|YP_005319639.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
gi|376318357|dbj|BAL62144.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
Length = 471
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/421 (49%), Positives = 298/421 (70%), Gaps = 6/421 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+L V++ FV+ V E+AVG
Sbjct: 3 FENLTERLQQAMGKLRRKGKVTEADVKEMMREIRLALLEADVNLQVIKDFVKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL K +G E L A PT+I++AGLQG GKTT + KLA
Sbjct: 63 TEVLESLTPAQQIVKIVDEELTKTLGSEAVGLNKAPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYL KQ + +++A DVYRPAAI+QL +LG+Q+ VPV+ GTE+ P +I +QG+ AK+
Sbjct: 123 NYLIKQENARPLMIAADVYRPAAIEQLKVLGQQLDVPVFDKGTEINPVEIVRQGIALAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL ID+A+MDELK +K + P E+LLVVDAMTGQ+A + +FN ++G
Sbjct: 183 KKNDYVLIDTAGRLHIDEALMDELKQIKELAQPNEILLVVDAMTGQDAVNVAESFNQQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ++TKLD D+RGGAALS++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVITKLDSDTRGGAALSIRAVTGAPIKYVGSGEKLTDLEVFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ AEE+ KK+ F+FNDF++Q V MG + ++ MIPGM + P
Sbjct: 303 TLIEKAQQDYDEKKAEELAKKMNENRFNFNDFIEQLDQVMGMGPLEDLVKMIPGMNNM-P 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
++ K ++ A++ +MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 362 GMDNIKVDPKDIERKRAIVFSMTPAERENPDLL--NPSRRRRIAAGSGNSVIEVNRMIKQ 419
Query: 502 L 502
Sbjct: 420 F 420
>gi|149371680|ref|ZP_01891096.1| signal recognition particle protein [unidentified eubacterium
SCB49]
gi|149355307|gb|EDM43867.1| signal recognition particle protein [unidentified eubacterium
SCB49]
Length = 442
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/420 (48%), Positives = 291/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG ++T+ N+ E ++++RRALL+ADV+ + + F V ++A+
Sbjct: 1 MFDNLSDKLDKAMHVLKGHGSITEVNVAETLKEVRRALLDADVNFKIAKEFTNTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL LMGG+ + + S P+VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTALQPSQLMVKIVKDELTALMGGDAAGVNLQGS-PSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAI+QL ++GEQ+GV VY+ + P IA + AK
Sbjct: 120 ANFLKSKKTKKPLLVACDVYRPAAINQLHVVGEQIGVEVYSEEGNMDPVSIATNAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVIVDTAGRL +D+AMM E+++V + + P E L VVDAMTGQ+A TFN I
Sbjct: 180 QNGHNVVIVDTAGRLAVDEAMMVEIENVHKAIQPQETLFVVDAMTGQDAVNTAKTFNERI 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDIFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +++A ++QKKI F F+DF+KQ + + +MGSM ++GMIPG GK
Sbjct: 300 VSLVERAQEQFDEDEARKLQKKIAKNQFGFDDFMKQIQQIKKMGSMKDLVGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP ER P L+ S R+KR+A+ SG + QV+QL+ Q
Sbjct: 360 K-DVDIDDDAFKGIEAIIQSMTPAERTSPALINGS--RKKRIAKGSGTSVTQVNQLLKQF 416
>gi|416124362|ref|ZP_11595358.1| signal recognition particle protein [Staphylococcus epidermidis
FRI909]
gi|418615160|ref|ZP_13178109.1| signal recognition particle protein [Staphylococcus epidermidis
VCU118]
gi|420199023|ref|ZP_14704707.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM031]
gi|319401472|gb|EFV89682.1| signal recognition particle protein [Staphylococcus epidermidis
FRI909]
gi|374818234|gb|EHR82402.1| signal recognition particle protein [Staphylococcus epidermidis
VCU118]
gi|394272709|gb|EJE17159.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM031]
Length = 455
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 309/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VSE+A+G
Sbjct: 3 FEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVAGD+YRPAAIDQL +G+Q+ +PVY+ G +V P QI + L+ AK+
Sbjct: 123 LLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVPPQQIVENALKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDETLMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ ++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ ++K + ++A+I++MTP+ER PE L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVS--RKKRIAKGSGRSLQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|418576380|ref|ZP_13140526.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325442|gb|EHY92574.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 455
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/430 (46%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQGTMQKIRGKGKVTEADIKLMMREVRLALLEADVNFKVVKDFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQEELTQLMGGENSTITMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K MLVA D+YRPAAIDQL +G+Q+ +PVY+ G +VKP QI + ++ AK+
Sbjct: 123 LLMRKKYNKKPMLVAADIYRPAAIDQLQTVGKQIDIPVYSEGDQVKPQQIVENAIKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL +D+ +M EL DVK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHVDETLMQELSDVKEITKPHEIMLVVDAMTGQDAVNVAQSFDEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + ++ A++++KK+ +++F +DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDEDKAKDLEKKMRTSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + ++A+I++MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q
Sbjct: 363 IDKLNMNEKQIDHIKAIIQSMTPSERNDPDTLNVS--RKKRIAKGSGRSVQEVNRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKMMKQF 430
>gi|307709396|ref|ZP_07645854.1| signal recognition particle protein [Streptococcus mitis SK564]
gi|307619979|gb|EFN99097.1| signal recognition particle protein [Streptococcus mitis SK564]
Length = 523
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVDIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|418146492|ref|ZP_12783272.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
gi|353813700|gb|EHD93928.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
Length = 523
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKVLAQPNEILLVVDAMIGQEAADVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|340349536|ref|ZP_08672547.1| signal recognition particle protein [Prevotella nigrescens ATCC
33563]
gi|339611074|gb|EGQ15913.1| signal recognition particle protein [Prevotella nigrescens ATCC
33563]
Length = 450
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/445 (47%), Positives = 301/445 (67%), Gaps = 5/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL KLMGGE L +++P +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAKLMGGESVGLKI-ENKPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI QL ++GE V VPVY+ + IA+ +++AK
Sbjct: 120 ANLLKTKEHKKPLLVACDVYRPAAIQQLKVVGESVDVPVYSEPDSKNVNAIAENAIKQAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGRL +D MM+E++ +K ++P E+L VVD+MTGQ+A FN +
Sbjct: 180 ANGNDVVIIDTAGRLAVDAEMMNEIESLKEHVSPDEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+M+ L+ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMDALDVFHPTRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI+ FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKILKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTSPEVLNNS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q R MK + G G + + N+
Sbjct: 417 EQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|385799827|ref|YP_005836231.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
gi|309389191|gb|ADO77071.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
Length = 446
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/432 (46%), Positives = 298/432 (68%), Gaps = 7/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ +NKLKG+ L+++++ +++++ ALLEADV+ VV+ F++ + E+AV
Sbjct: 2 IFSSLAEKLQDTFNKLKGKGKLSEKDVKAALKEVKMALLEADVNYKVVKDFIKKIEERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +E+ LMGG ++ + PT+I++ GLQG GKTT + KL
Sbjct: 62 GNEVMESLTPGQHVIKIVNEEMQALMGGSKEDIAISSEPPTIIMMVGLQGSGKTTSAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L K GK+ +LVAGDVYRPAAI QL +LGE++ +PV++ G + P IAK + A
Sbjct: 122 ARKLDKDGKNPLLVAGDVYRPAAIRQLQVLGERLDLPVFSMGDDSNPVDIAKGSINYASS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N D +I+DTAGRL ID+ MM+EL+ +K ++P E+LLVVDAMTGQ+A + F+ +
Sbjct: 182 HNCDTIILDTAGRLHIDQEMMEELESIKAAVDPDEILLVVDAMTGQDAVNVAKNFDQRLD 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G +LTK+DGD+RGGAALS+K ++GKPIK G GE++ DLE F+PDRM+ RILGMGDVL
Sbjct: 242 VDGIVLTKMDGDARGGAALSIKAITGKPIKFAGTGEKLADLETFHPDRMSSRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---K 440
S +EKA++ + QE A+++++K+ F DF++Q V MG M ++GMIPG+G +
Sbjct: 302 SLIEKAEQSIDQEKAKKLEEKLRKNEFTLEDFMEQMEQVRNMGPMDEILGMIPGLGGAKQ 361
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ QV +K L +EA+I +MTPEER PE++ S RRKR+AQ SG + Q+V++L+
Sbjct: 362 LKNMQVD--DKHLDYIEAIISSMTPEERRDPEVINGS--RRKRIAQGSGTSIQEVNRLLK 417
Query: 501 QLFQMRVRMKNL 512
Q Q + MK L
Sbjct: 418 QFRQTKKMMKQL 429
>gi|419780220|ref|ZP_14306070.1| signal recognition particle protein [Streptococcus oralis SK100]
gi|383185379|gb|EIC77875.1| signal recognition particle protein [Streptococcus oralis SK100]
Length = 523
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|347750524|ref|YP_004858089.1| signal recognition particle protein [Bacillus coagulans 36D1]
gi|347583042|gb|AEO99308.1| signal recognition particle protein [Bacillus coagulans 36D1]
Length = 447
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/437 (48%), Positives = 316/437 (72%), Gaps = 4/437 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +T+ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQGTMQKIRGKGKVTESDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGG S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVLKSLTPGQQVIKIVQEELTNLMGGSQSKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK ++ +LVA D+YRPAAI QL LG+Q+G+PV++ G ++ P +IA+Q +E+AK+
Sbjct: 123 NLLRKKYNRTPLLVAADIYRPAAIKQLETLGKQLGMPVFSLGDKISPVEIARQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +M+ELK++K + +P E+ LVVDAMTGQ+A + +FN ++G
Sbjct: 183 EHHDTVIIDTAGRLHIDSELMNELKEIKELAHPDEIFLVVDAMTGQDAVNVAQSFNDQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+ KPIK G GE+M+ LEPF+P+RMA RILGMGD+L
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTEKPIKFAGMGEKMDALEPFHPERMASRILGMGDIL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE + +E A ++KK+ +F +DFL+Q V +MG + ++ MIPG ++
Sbjct: 303 SLIEKAQETVDEEKARALEKKMRDQSFTLDDFLEQLGQVRKMGPLGDILKMIPGANRMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I++MT +E+ +P+++ S R+KR+A+ SG+ Q+V++L+ Q
Sbjct: 363 MDNLQIDEKQIAHVEAIIQSMTKQEKIRPDIINAS--RKKRIAKGSGRPVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEGG 519
+M+ MK L G+ + G
Sbjct: 421 EEMKKMMKQLQGMNQKG 437
>gi|385809358|ref|YP_005845754.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
gi|383801406|gb|AFH48486.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
Length = 441
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/433 (48%), Positives = 306/433 (70%), Gaps = 9/433 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +L+ ++AA K+ G+ LT+ NI + +R+IRR LL+ADV+ V + F+ V E+A+
Sbjct: 1 MFEELSLKIDAALKKITGQGRLTEANISDTLREIRRILLDADVNYKVAKDFIDKVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I + P Q + KI+ DELV+L+GG SE+ + T+IL+ GLQG GKTT SAKL
Sbjct: 61 GKEVIASITPGQLITKIIYDELVELLGGGHSEIFLNPTGATIILVVGLQGSGKTTFSAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQ-IAKQGLEEAK 262
A LK++ + +LVA D+YRPAAI+QL ILG+QV VPV++ E K ++ +A + L+ K
Sbjct: 121 AKRLKERKRKVLLVAADIYRPAAIEQLKILGQQVDVPVFS--LEQKDARLVASESLKYVK 178
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+K D +I+DTAGRL +D+ MM E+ D+K ++ PTE L VVD+MTGQ+A FN +
Sbjct: 179 EKGFDTLIIDTAGRLHVDEEMMKEVADIKEIVKPTETLFVVDSMTGQDAVNSAKAFNETV 238
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +L+KLDGD+RGGAA+S++ V GKPIK V GE++E+L+ FYPDR+A RILG GD+
Sbjct: 239 NFDGIVLSKLDGDARGGAAISIRSVVGKPIKFVSNGEKLENLDVFYPDRLASRILGKGDI 298
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KI 441
+S VEKAQE + + +A++M++K+ FDF DFLKQ + + +MGS+S +IGMIPG+G +I
Sbjct: 299 VSLVEKAQETIDEFEAKKMEEKLRKNKFDFEDFLKQIKLIKKMGSLSSLIGMIPGLGSQI 358
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
AQ+ +K+L +EA+I +MT +ERE P++L S RRKR+A+ SG T Q V++L+ Q
Sbjct: 359 KNAQI--DDKALVKVEAIINSMTKQERENPKVLNGS--RRKRIARGSGTTIQDVNRLIKQ 414
Query: 502 LFQMRVRMKNLMG 514
FQ RM ++M
Sbjct: 415 -FQEMQRMMSMMN 426
>gi|449960337|ref|ZP_21810595.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|450137749|ref|ZP_21871799.1| signal recognition particle protein [Streptococcus mutans NLML1]
gi|449167693|gb|EMB70560.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|449234787|gb|EMC33774.1| signal recognition particle protein [Streptococcus mutans NLML1]
Length = 516
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|335031105|ref|ZP_08524560.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
gi|333770419|gb|EGL47456.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
Length = 516
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 303/439 (69%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRMALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEAARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +KI FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKIRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQVMQ---GVMSG 433
>gi|326335869|ref|ZP_08202048.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692013|gb|EGD33973.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 448
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/420 (48%), Positives = 289/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V +A+
Sbjct: 1 MFDNLSDKLERALHVLKGHGQITEINVAETLKEVRRALLDADVNYSIAKDFTSKVKAKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIVRDEL +LMGG+ + + + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTTLQPGQLMVKIVRDELTELMGGDATGINLS-GNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAIDQL I+GEQ+GVPV++ P IA++GL+ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDVYRPAAIDQLHIVGEQIGVPVFSERGNNNPVDIAQKGLQYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVI+DTAGRL D+ MM E+ ++ + +NP E L VVDAMTGQ+A FN +
Sbjct: 180 SNGFNVVIIDTAGRLAADEQMMKEIAEIHKAVNPQETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV
Sbjct: 240 DFDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL Q + + +MGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLAQIQQIKKMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ + K +EA+I +MTP ER P ++ S R+ R+A+ SG+ +V+QL+ Q
Sbjct: 360 K-DLDISDDAFKYIEAIIFSMTPAERSNPSIINTS--RKNRIAKGSGRNIAEVNQLLKQF 416
>gi|156741648|ref|YP_001431777.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
gi|156232976|gb|ABU57759.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
Length = 444
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/441 (48%), Positives = 307/441 (69%), Gaps = 7/441 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+A + KL G+ LT+E++ E M+ +R ALLEADV+L VVR FV V+E+AV
Sbjct: 1 MFESLSDRLQAVFQKLGGKGKLTEEDVREAMKQVRIALLEADVNLKVVREFVARVTEKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P QQ++KIV EL+ L+G L A+ PT+I+L GLQG GKTT +AKL
Sbjct: 61 GEEVTKSLTPAQQVIKIVHQELIDLLGQANVPLAEARPGPTIIMLIGLQGSGKTTTAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+GK +LVA D+YRPAAI QL LG Q+G+PV++ G + +P IA+ + A+
Sbjct: 121 ALWLRKKGKRPLLVAADIYRPAAITQLESLGRQLGIPVHSEGAQSRPPDIARNAVRRARD 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++ VI+DTAGRLQID+ +M EL+ + + P E LLVVDAM GQEA + FN +G
Sbjct: 181 ESITHVIIDTAGRLQIDEPLMVELEQINAAVEPVERLLVVDAMIGQEAVRVAEEFNRRVG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGD 381
+TG I TK+DGD+RGGAALSV+ V+G PIK +G GE++E +EPF+PDR+A RILGMGD
Sbjct: 241 LTGIIFTKIDGDARGGAALSVRAVTGVPIKFLGSGEKVEASTIEPFHPDRLASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VLS +E+A+ + +E A +MQKK++ +FDF DFL + + ++G + +++GMIPG+ K+
Sbjct: 301 VLSLIERAEAIYDEEQARKMQKKLVKGSFDFEDFLASMQQMRKLGPLQQILGMIPGLDKL 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
++ EK LK +EA+I +MT EER P+L+ R++R+A+ SG Q+V+QLV Q
Sbjct: 361 AREEII-TEKDLKKIEAIIFSMTKEERRNPDLIKGR--RKERIARGSGTQVQEVTQLVNQ 417
Query: 502 LFQMRVRMKNLMGVMEGGSLP 522
QM+ MK + G +GG P
Sbjct: 418 FRQMQRMMKRMGG--KGGIDP 436
>gi|325978265|ref|YP_004287981.1| signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|325178193|emb|CBZ48237.1| Signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 521
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K + +++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKDENARPLMIAADIYRPAAIDQLKTLGNQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEKLMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|294500961|ref|YP_003564661.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|295706307|ref|YP_003599382.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|384045187|ref|YP_005493204.1| signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
gi|294350898|gb|ADE71227.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|294803966|gb|ADF41032.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|345442878|gb|AEN87895.1| Signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
Length = 447
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L++ KLKG+ + + ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQSTLQKLKGKGKVNEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVLKSLTPGQQVIKVVQEELTALMGGEQSKIAVAPKAPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK ++ +LVA D+YRPAAI QL LG+Q+ + V++ G +V P +IAKQ + AK+
Sbjct: 123 NLLRKKYNRNPLLVAADIYRPAAIKQLETLGKQLSMSVFSLGDQVSPVEIAKQAIAHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL +D+ +M+EL+ +K + NP E+ LVVDAMTGQ+A + +FN ++G
Sbjct: 183 EHHDYVLIDTAGRLHVDENLMEELEQIKELSNPDEIFLVVDAMTGQDAVNVADSFNKQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK VG GE+M+ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTDTPIKFVGLGEKMDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + E A+E++ K+ + +F F+DFL Q V +MG + +IGM+PG K+
Sbjct: 303 TLIEKAQANVDAEKAKELEAKLRTQSFTFDDFLDQLAQVRQMGPLDELIGMLPGANKVKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK + +EA+I +MT E+ PE++ S RRKR+A+ SG++ Q+V++L+ Q
Sbjct: 363 LKNLQVDEKQINHVEAIIRSMTKAEKTNPEIINAS--RRKRIAKGSGRSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK +
Sbjct: 421 EDMKKMMKQM 430
>gi|450046423|ref|ZP_21838937.1| signal recognition particle protein [Streptococcus mutans N34]
gi|449198865|gb|EMB99957.1| signal recognition particle protein [Streptococcus mutans N34]
Length = 516
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|326798855|ref|YP_004316674.1| signal recognition particle protein [Sphingobacterium sp. 21]
gi|326549619|gb|ADZ78004.1| signal recognition particle protein [Sphingobacterium sp. 21]
Length = 446
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 291/430 (67%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ LKG+ +T+ N+ E +++IR+ALL+ADV+ + F V ++A+
Sbjct: 1 MFDSLQDKLDRAFKVLKGQGNITEINVAETVKEIRKALLDADVNYKTAKAFTDEVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q L KI+ DEL +LMGG ++L K+ PTVIL+AGL G GKTT + KL
Sbjct: 61 GENVLTSISPGQLLTKIMNDELTQLMGGTATDLELGKN-PTVILIAGLNGAGKTTFTGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A YLK K+GK +LVAGDVYRPAAIDQL +L +QV VPVYT P IA++G+ AK
Sbjct: 120 AKYLKEKRGKKPLLVAGDVYRPAAIDQLEVLAQQVDVPVYTNRESKDPIAIAEEGVAAAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVIVDTAGRL ID+A+M+E+ VK NP E+L VVD+MTGQ+A FN +
Sbjct: 180 RNGQNVVIVDTAGRLAIDEALMNEISAVKEATNPHEILFVVDSMTGQDAVNTAKVFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS+K V KPIK +G GE+M+ L+ F+PDRMA RILGMGDV
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMDALDVFHPDRMASRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ +++A +QKKI FDFNDF+ Q + + +MG+M ++GMIPG+GK
Sbjct: 300 VSLVERAQQQFDEKEAAALQKKIRKNKFDFNDFISQIQQIKKMGNMKDLMGMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ERE P+ + + RR R+A+ SG V++L+ Q
Sbjct: 360 -KDIDIDDDAFKPIEAIIGSMTPYERENPDAIDQK--RRMRIAKGSGTDINDVNKLMKQF 416
Query: 503 FQMRVRMKNL 512
MR MK
Sbjct: 417 SDMRKMMKQF 426
>gi|383939522|ref|ZP_09992681.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
gi|383712576|gb|EID69623.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
Length = 523
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFACKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVDIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|449886043|ref|ZP_21785923.1| signal recognition particle protein [Streptococcus mutans SA41]
gi|449915593|ref|ZP_21796362.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449944517|ref|ZP_21806769.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449947928|ref|ZP_21807721.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449988781|ref|ZP_21820736.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|450038971|ref|ZP_21835979.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449148475|gb|EMB52342.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449156236|gb|EMB59711.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449168107|gb|EMB70945.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449183439|gb|EMB85422.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|449200928|gb|EMC01945.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449254689|gb|EMC52587.1| signal recognition particle protein [Streptococcus mutans SA41]
Length = 516
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|317121794|ref|YP_004101797.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
gi|315591774|gb|ADU51070.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
Length = 445
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 306/436 (70%), Gaps = 5/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L++ + +L+G+ LT+ ++ +R++R ALLEADV VV+ F+ V ++AVG
Sbjct: 3 FEGLAEKLQSVFKRLRGKGKLTEADVEAALREVRLALLEADVHFKVVKDFIARVRQRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL +LMGG+ + L + P ++L GLQG GKTT +AKLA
Sbjct: 63 QEVLESLTPAQQVIKIVHDELTQLMGGQQARLDLGGAPPVPVMLVGLQGSGKTTTAAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L +QG+ +LVA DVYRPAA++QLV LG+Q+ +PV+ GT+ P IA++G+ EA+++
Sbjct: 123 RLLARQGRQPLLVAADVYRPAAVEQLVTLGQQIQLPVHAPGTDRDPVDIAREGVAEARRR 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
DVVI+DTAGRL ID A+M+EL+ +++ + P E+LLVVDAMTGQ+A + TF+ +GI
Sbjct: 183 GRDVVIIDTAGRLHIDDALMEELERIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLGI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G +LTKLDGD+RGGAALSV+ V+G+PIK VG GER++ LEPF+P+RMA RILGMGDVLS
Sbjct: 243 DGVVLTKLDGDARGGAALSVRAVTGRPIKFVGLGERVDQLEPFHPERMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITP 443
+EKAQ + A+ +++K+ FD DFL+Q R V +MG + +++ MIPG+G ++
Sbjct: 303 LIEKAQAAFDAQQAQRLERKLREQTFDLEDFLEQLRQVRKMGPLDQLLAMIPGLGPRLKD 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V E E L+ +EA+I++MTPEER PE++ S RR+R+A+ SG Q V++L+ Q
Sbjct: 363 VTVDEGE--LRRIEAIIQSMTPEERRHPEIINAS--RRRRIARGSGTRVQDVNRLLKQFA 418
Query: 504 QMRVRMKNLMGVMEGG 519
+ + MK + G G
Sbjct: 419 ETQRLMKQVTGAARRG 434
>gi|322374427|ref|ZP_08048941.1| signal recognition particle protein [Streptococcus sp. C300]
gi|331266505|ref|YP_004326135.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|406577203|ref|ZP_11052819.1| signal recognition particle protein [Streptococcus sp. GMD6S]
gi|419778920|ref|ZP_14304801.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|321279927|gb|EFX56966.1| signal recognition particle protein [Streptococcus sp. C300]
gi|326683177|emb|CBZ00795.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|383186684|gb|EIC79149.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|404460210|gb|EKA06486.1| signal recognition particle protein [Streptococcus sp. GMD6S]
Length = 523
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|307565825|ref|ZP_07628286.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
gi|307345449|gb|EFN90825.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
Length = 456
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/453 (46%), Positives = 302/453 (66%), Gaps = 11/453 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V +A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDRVKAKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VK+V DEL LMGGE + ++RP +IL++GLQG GKTT + KL
Sbjct: 61 GMNVLTAVKPGQLMVKLVHDELALLMGGEAVGMSL-ENRPAIILMSGLQGSGKTTFAGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K K +LVA DVYRPAAIDQL ++GEQV VPVY+ ++IA + EAK
Sbjct: 120 AKMLKTKNHKQPLLVACDVYRPAAIDQLKVVGEQVDVPVYSEAGNKNVNEIATHAIAEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DV+I+DTAGRL +D+ MM+E++ +K + P E L VVD+MTGQ+A FN +
Sbjct: 180 SKGNDVIIIDTAGRLAVDEDMMNEIESLKNHITPDETLFVVDSMTGQDAVNTAKEFNSRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+M+ ++ F+P+RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMDAIDVFHPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKIQKNKFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L + +RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTNPEIL--NNIRRRRIAKGSGTDIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGG------SLPALSNLED 529
Q R MK + G G SL +SN+ D
Sbjct: 417 DQTRKMMKMVTGSKMAGMMSRMKSLKNMSNMPD 449
>gi|336395268|ref|ZP_08576667.1| signal recognition particle protein [Lactobacillus farciminis KCTC
3681]
Length = 478
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/446 (46%), Positives = 306/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ ++ LKG+ L+ E++ + MR++R ALLEADV+ VV+ FV+ V E+A+G
Sbjct: 3 FEGLSERLQKVFSSLKGKGKLSDEDVRKVMREVRMALLEADVNFDVVKTFVKTVRERALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL KLMG E L A PT+I++ GLQG GKTT + KLA
Sbjct: 63 AEVMESLTPSQQVIKIVDEELTKLMGQEAVPLNKAPHIPTIIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK K+ +AGDVYRPAAI+QL +G+Q+ VPVY GT+ P +I K GL AK+
Sbjct: 123 NRLKTNDKARPFFIAGDVYRPAAIEQLKTIGQQLDVPVYDEGTDHDPVEIVKNGLAVAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D VI+DTAGRL+ID+ +M+EL+ +K + +P E+L V D+MTGQ AA + F+ ++
Sbjct: 183 NKNDYVIIDTAGRLEIDEQLMEELQKIKDLAHPNEILFVADSMTGQVAAKVAHGFDEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+++ L+ F+PDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIGQGEKLDQLDVFHPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E A+++ +KI +FDFNDF+ Q + +MG + ++ MIPGM P
Sbjct: 303 TLIEKAQTDYNEEQAKQVAEKIRENSFDFNDFIDQMDQIQKMGPLDELMKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK + ++A++ +MTP+ERE P+LL +P RR+R+A SG++ Q V++++ Q
Sbjct: 362 ALANINIGEKDIAHLKAIVYSMTPKEREDPDLL--NPSRRRRIAAGSGQSVQNVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q R ++M M G++ + L
Sbjct: 420 FKQSR----DMMNKMSKGNMAGMEQL 441
>gi|419766060|ref|ZP_14292277.1| signal recognition particle protein [Streptococcus mitis SK579]
gi|383354438|gb|EID32001.1| signal recognition particle protein [Streptococcus mitis SK579]
Length = 523
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|329115921|ref|ZP_08244638.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|326906326|gb|EGE53240.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|456370942|gb|EMF49838.1| Signal recognition particle [Streptococcus parauberis KRS-02109]
gi|457095553|gb|EMG26037.1| Signal recognition particle [Streptococcus parauberis KRS-02083]
Length = 524
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/431 (46%), Positives = 298/431 (69%), Gaps = 4/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+ +++ E ++IR ALLEADV+LPVV+ F++ + E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSDKDVQEVTKEIRLALLEADVALPVVKTFIKRIRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE+V + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTAILGSETSEIVKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I +GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVEIVTKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+DVK + P E+LLV+D+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVIDSMIGQEAANVADEFNKQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + Q+ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQDYDQQKSLELAEKMRENTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ EK + A++ +MTP ERE PELL +P RR+R+A SG T +V++ +
Sbjct: 363 LANIKVDEKQIARKRAIVSSMTPTERENPELL--NPSRRRRIASGSGNTFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLM 513
Q + M+ +M
Sbjct: 421 NQAKTMMQGMM 431
>gi|148994098|ref|ZP_01823438.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489114|ref|ZP_02713313.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|418125923|ref|ZP_12762831.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|418191839|ref|ZP_12828342.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|418214472|ref|ZP_12841207.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|418234483|ref|ZP_12861061.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|419484511|ref|ZP_14024287.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|419508354|ref|ZP_14048007.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|421294078|ref|ZP_15744801.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|421301149|ref|ZP_15751819.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
gi|147927451|gb|EDK78480.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572579|gb|EDT93107.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|353796704|gb|EHD77043.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|353856912|gb|EHE36879.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|353871755|gb|EHE51626.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|353887774|gb|EHE67551.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|379584022|gb|EHZ48899.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|379612072|gb|EHZ76794.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|395894368|gb|EJH05348.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|395898709|gb|EJH09653.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
Length = 523
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVCHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|450132637|ref|ZP_21870177.1| signal recognition particle protein [Streptococcus mutans NLML8]
gi|449152802|gb|EMB56500.1| signal recognition particle protein [Streptococcus mutans NLML8]
Length = 516
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/438 (46%), Positives = 302/438 (68%), Gaps = 11/438 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--- 440
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
++ +V E E + K A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEGEIARK--RAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIK 418
Query: 501 QLFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 419 DFNQAK---KMMQGVMSG 433
>gi|322376834|ref|ZP_08051327.1| signal recognition particle protein [Streptococcus sp. M334]
gi|321282641|gb|EFX59648.1| signal recognition particle protein [Streptococcus sp. M334]
Length = 523
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+L VV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALSVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNTQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|449902748|ref|ZP_21791679.1| signal recognition particle protein [Streptococcus mutans M230]
gi|449975087|ref|ZP_21815612.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|450100286|ref|ZP_21858716.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|450122380|ref|ZP_21866721.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|450169747|ref|ZP_21883158.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449177352|gb|EMB79655.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|449220516|gb|EMC20380.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|449227957|gb|EMC27347.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|449246900|gb|EMC45195.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449262039|gb|EMC59496.1| signal recognition particle protein [Streptococcus mutans M230]
Length = 516
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|220931573|ref|YP_002508481.1| signal recognition particle protein [Halothermothrix orenii H 168]
gi|219992883|gb|ACL69486.1| signal recognition particle protein [Halothermothrix orenii H 168]
Length = 444
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/437 (49%), Positives = 309/437 (70%), Gaps = 5/437 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L S L+A KL+ + L+ +++ +++++ ALLEADV+ VV++F++ V E+AV
Sbjct: 2 IFEGLASKLQATLKKLRNKGKLSGKDVKSALKEVKLALLEADVNYKVVKQFIKRVQERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DEL +LMGG S+L + PT+I+L GLQG GKTT +AKL
Sbjct: 62 GHEVMESLTPGQQVIKIVNDELTELMGGNKSDLSISSKPPTIIMLVGLQGAGKTTSAAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LKK+GK +LVAGD+YRPAAI QL +LG+++ +PV++ G + P I+K G+ +A+
Sbjct: 122 ARFLKKKGKKPLLVAGDIYRPAAIKQLQVLGDRLDIPVFSMGDKNSPVDISKAGISKAES 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL ID+ MMDELK +K + P E+LLVVDAMTGQ+A + F+ +G
Sbjct: 182 NGNDVVIIDTAGRLHIDEEMMDELKSIKSNVRPHEILLVVDAMTGQDAVNVAENFSESLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALS+K V+GKPIK VG GE+++ LE F+PDRM+ RILGMGDVL
Sbjct: 242 IDGIILTKLDGDARGGAALSIKAVTGKPIKFVGMGEKLDALESFHPDRMSSRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
S +EKA+ + + AEE++KKI F DFL+Q + V MG + +++GMIPG+ G++
Sbjct: 302 SLIEKAEASIDAKKAEELEKKIRQNEFSLEDFLEQLQQVRNMGPLDQILGMIPGVSGQLK 361
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
QV EK L +EA+I +MT EER+ PE++ S RR+R+A+ SG Q V++L+ Q
Sbjct: 362 NLQV--DEKQLDRIEAIINSMTIEERKNPEIINGS--RRRRIARGSGTKIQDVNRLLKQF 417
Query: 503 FQMRVRMKNLMGVMEGG 519
Q + MK L G+ + G
Sbjct: 418 KQTKKMMKQLNGMQKSG 434
>gi|194014310|ref|ZP_03052927.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
gi|194013336|gb|EDW22901.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
Length = 446
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/436 (47%), Positives = 319/436 (73%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTELMGGEESKIAVAKKSPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + M+VA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRQPMMVAADIYRPAAIQQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID+ +MDEL+ VK V +P E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHHDYVILDTAGRLHIDEELMDELQKVKEVASPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK GE+++ +EPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + Q+ A+E+++K+ + +F +DFL+Q V MG + +I M+PG GK+
Sbjct: 303 TLIEKAQANVDQDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I++MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNVQVDEKQLNHIEAIIKSMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|163752849|ref|ZP_02159973.1| signal recognition particle protein [Kordia algicida OT-1]
gi|161326581|gb|EDP97906.1| signal recognition particle protein [Kordia algicida OT-1]
Length = 443
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 292/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG ++T+ N+ E ++++RRALL+ADV+ + + F + V E+A+
Sbjct: 1 MFNNLSEKLDKAMHVLKGHGSITEVNVAETLKEVRRALLDADVNFKIAKDFTKRVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL LMGG+ + + + +P++IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTTLQPGQLMVKIVKDELTDLMGGDAAGINLS-GKPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAIDQL ++G+Q+ V VY+ P IA+ G+ AK
Sbjct: 120 ANYLKNKKTKKPLLVACDVYRPAAIDQLHVVGDQIKVDVYSDKGNNDPVAIAQAGIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL +D+AMM E+ ++ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 QNGHNVVIIDTAGRLAVDEAMMTEIANIHKAIEPQETLFVVDSMTGQDAVNTAKAFNDIL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFLKQ + V +MG+M ++GMIPG K
Sbjct: 300 VSLVERAQEQFDEEEARKLQKKIAKNQFGFDDFLKQIQQVKKMGNMKDLVGMIPGASKAM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
E + + K +EA+I +MTP ER KP ++ S R+KR+A+ +G++ Q+++QL+ Q
Sbjct: 360 KGMEIE-DDAFKHIEALIHSMTPAERSKPSMINAS--RKKRIAKGAGRSVQEMNQLLKQF 416
>gi|182684220|ref|YP_001835967.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
gi|182629554|gb|ACB90502.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
Length = 523
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKSLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+K+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLQKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|404403853|ref|ZP_10995437.1| signal recognition particle protein [Alistipes sp. JC136]
Length = 443
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 297/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE ++ LKGE +T+ NI E +++IRRAL++ADV+ V + F V ++A+
Sbjct: 1 MFENLTDKLERSFKILKGEGRITEINIAETLKEIRRALIDADVNYKVAKSFTDEVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ V+P Q + KIVRDEL +LMGG +++ + P VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLKAVKPGQMMTKIVRDELAELMGGTATDIKL-EGTPAVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+G+ +LVAGDVYRPAAIDQL +LG Q+GV VYT P QIA+ G++ A+
Sbjct: 120 AAMLKSKKGRQVLLVAGDVYRPAAIDQLKVLGGQIGVEVYTEEGNKNPVQIAENGIKYAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ N +VVIVDTAGRL +D+AMM E+ +K + P+E L VVDAMTGQ+A FN +
Sbjct: 180 QNNCNVVIVDTAGRLAVDEAMMQEITAIKAAVKPSETLFVVDAMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KP+K + GE+M+ L+ F+P+RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAAISIRSVVNKPLKFISSGEKMDALQVFHPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +++KK++ F+FNDF+ Q + + +MG++ + M+PGMGK+
Sbjct: 300 VSLVERAQEQFDEEEARKLKKKLVKNQFNFNDFISQIQQIKKMGNLKDLASMLPGMGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + K EA+I +MTP ERE+PE++ + RR+R+A+ SG T V++L+ Q
Sbjct: 360 K-NVDIPDDVFKQTEAIISSMTPAERERPEII--NARRRERIAKGSGTTMADVNRLMKQF 416
Query: 503 FQMRVRMKNLMG 514
R MK + G
Sbjct: 417 EDTRKMMKTVAG 428
>gi|315222974|ref|ZP_07864853.1| signal recognition particle protein [Streptococcus anginosus F0211]
gi|315187924|gb|EFU21660.1| signal recognition particle protein [Streptococcus anginosus F0211]
Length = 516
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 303/439 (69%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++ R ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKETRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ G +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEGARPLMIAADIYRPAAIDQLTTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPTERENPDLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQVMQ---GVMSG 433
>gi|295696070|ref|YP_003589308.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
gi|295411672|gb|ADG06164.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
Length = 445
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/433 (48%), Positives = 300/433 (69%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ +LK + L++ ++ E M+++RRALL ADV+ VVR FV V E+AV
Sbjct: 3 MFEGLAGRLQEAFARLKSKGKLSEADVDEAMKEVRRALLAADVNFTVVRDFVARVRERAV 62
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ++KIV DEL L+GG+ S L + RP V++L GLQG GKTT + KL
Sbjct: 63 GQEVMKSLTPAQQVIKIVHDELTALLGGKPSTLNLS-GRPAVVMLVGLQGAGKTTTAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +++KQG+ +LVA DVYRPAA+ QL LGE + VPV++ + P +I+K LE A +
Sbjct: 122 AQWVRKQGRRPLLVAADVYRPAAVRQLQTLGEALKVPVFSVDGDADPVEISKSSLERASQ 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ DVV+VDTAGRL +D A+M+EL+ +K + P E+LLVVDAMTGQ A + F+ +G
Sbjct: 182 EGCDVVLVDTAGRLHVDDALMEELERMKAAVVPGEILLVVDAMTGQSAVEVAEAFHGRLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TGAI TKLDGD++GGAALS+ V+G PIK G GE+++ LEPFYPDRMA RILGMGDVL
Sbjct: 242 LTGAIFTKLDGDTKGGAALSILSVAGCPIKFAGVGEKLDALEPFYPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ + E A+++++++ + F DFL Q R V ++G + +++GM+PGM KI
Sbjct: 302 TLIEKAQQTVDAEKAKQLERQLRAGEFSLEDFLDQLRQVRKLGPLDQLLGMLPGMNKIKG 361
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ E+ L +EA+I +MTPEER +PEL+ S RR+R+A SG + V +L+ Q
Sbjct: 362 LGNLQVDERQLGRVEAIILSMTPEERRRPELIDAS--RRRRIASGSGTRVEDVGRLLKQF 419
Query: 503 FQMRVRMKNLMGV 515
+MR MK G+
Sbjct: 420 KEMRKMMKQFSGM 432
>gi|254852709|ref|ZP_05242057.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-503]
gi|258606030|gb|EEW18638.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-503]
Length = 467
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/424 (48%), Positives = 304/424 (71%), Gaps = 4/424 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ + + ++ E MR++R ALLEADV+ VV++F++ VSE+AVG
Sbjct: 3 FEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL LMGGE S++ A PTVI++ GLQG GKTT S KLA
Sbjct: 63 ADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++
Sbjct: 183 EHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + E + M++K+ + +DFL+Q + V +MG + ++ M+PG K+
Sbjct: 303 SLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGANKMKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ +K L +EA+I++MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q
Sbjct: 363 LDNMNVDDKQLGHIEAIIKSMTKNEKDNPDIINAS--RRKRIARGSGRPVQEINRLLKQF 420
Query: 503 FQMR 506
+M+
Sbjct: 421 GEMK 424
>gi|397649721|ref|YP_006490248.1| signal recognition particle protein [Streptococcus mutans GS-5]
gi|392603290|gb|AFM81454.1| signal recognition particle protein [Streptococcus mutans GS-5]
Length = 516
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q + MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQIQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|306831354|ref|ZP_07464514.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304426590|gb|EFM29702.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 521
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K + +++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKDENARPLMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEKLMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|293365278|ref|ZP_06611995.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307703819|ref|ZP_07640760.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|291316728|gb|EFE57164.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307622654|gb|EFO01650.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
Length = 523
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQDVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|417915214|ref|ZP_12558835.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
gi|342835328|gb|EGU69579.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
Length = 523
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGL++A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLDQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|229047532|ref|ZP_04193122.1| Signal recognition particle protein [Bacillus cereus AH676]
gi|229081100|ref|ZP_04213610.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|229146416|ref|ZP_04274787.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|229192014|ref|ZP_04318984.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228591565|gb|EEK49414.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228637049|gb|EEK93508.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|228702144|gb|EEL54620.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|228723779|gb|EEL75134.1| Signal recognition particle protein [Bacillus cereus AH676]
Length = 436
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/424 (48%), Positives = 305/424 (71%), Gaps = 8/424 (1%)
Query: 96 WNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQ 155
K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P Q
Sbjct: 1 MQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQ 60
Query: 156 QLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSC 214
Q++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLAN L KK +
Sbjct: 61 QVIKVVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKP 120
Query: 215 MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTA 274
MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTA
Sbjct: 121 MLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTA 180
Query: 275 GRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 334
GRL ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDG
Sbjct: 181 GRLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDG 240
Query: 335 DSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQ 394
D+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ +
Sbjct: 241 DTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVD 300
Query: 395 QEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEK 451
+E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK
Sbjct: 301 EEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EK 358
Query: 452 SLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKN 511
+ +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK
Sbjct: 359 QIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKT 416
Query: 512 LMGV 515
+ G+
Sbjct: 417 MTGM 420
>gi|450088635|ref|ZP_21854871.1| signal recognition particle protein [Streptococcus mutans NV1996]
gi|449216367|gb|EMC16492.1| signal recognition particle protein [Streptococcus mutans NV1996]
Length = 516
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|450052707|ref|ZP_21841379.1| signal recognition particle protein [Streptococcus mutans NFSM1]
gi|56968646|gb|AAW32279.1| Ffh [Streptococcus mutans]
gi|449200130|gb|EMC01176.1| signal recognition particle protein [Streptococcus mutans NFSM1]
Length = 516
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIVMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|157150208|ref|YP_001450412.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075002|gb|ABV09685.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 524
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/470 (44%), Positives = 311/470 (66%), Gaps = 26/470 (5%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M +I M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAS-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK + A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 362 ALKNFKVDEKEIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLM-GVME-------------------GGSLPALSNLEDAL 531
Q + M+ ++ G M GG++P +S L+D +
Sbjct: 420 FNQSKQLMQGVLSGDMSKMMKQMGLNPNNMPKNMPGGGAMPDMSALQDMM 469
>gi|373106124|ref|ZP_09520428.1| signal recognition particle protein [Stomatobaculum longum]
gi|371653220|gb|EHO18624.1| signal recognition particle protein [Stomatobaculum longum]
Length = 450
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/434 (48%), Positives = 302/434 (69%), Gaps = 6/434 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L++ + ++++R ALLEADV+ VV++FV+++ E+AVG
Sbjct: 3 FESLTEKLQRVFRDLRGKGKLSEADTKAALKEVRMALLEADVNFKVVKQFVKSIEERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKL 203
++ + P QQ+VKIV +EL+KLMG E +E+ A+ R TVIL+AGLQG GKTT +AKL
Sbjct: 63 AEVLESLTPGQQVVKIVNEELIKLMGSETTEIKMAQDRDITVILMAGLQGAGKTTTAAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK +G +L A DVYRPAAI+QL + GE+VGVPV++ G+ V P IA+ E+A++
Sbjct: 123 AGKLKAKGHRPLLAACDVYRPAAIEQLRVNGEKVGVPVFSMGSGVDPVNIARAAFEKARQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D++IVDTAGRLQID+ MM+EL +K L LL VDAMTGQEA + TF ++G
Sbjct: 183 DHNDILIVDTAGRLQIDEQMMEELGRIKEALRADWTLLTVDAMTGQEAVNVAKTFEDKVG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALS+K V+GKPI VG GE++ DLE FYPDRMA RILGMGD+L
Sbjct: 243 VDGVIVTKLDGDTRGGAALSIKAVTGKPILFVGMGEKLSDLEQFYPDRMASRILGMGDIL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + + +A M +K+ A FDFNDFL Q + V ++G ++ ++ M+P G P
Sbjct: 303 SLIEKAQAEVDEAEARRMSEKLKKAEFDFNDFLDQMKQVKKLGGIAGIMAMMPTAGASMP 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ E+ + +EAMI +M+ EER P +L +P R+ R+A+ +G +V+++V Q
Sbjct: 363 -EIDESH--MGRVEAMILSMSKEERANPSIL--NPSRKNRIARGAGVDINEVNRMVKQFE 417
Query: 504 QMRVRMKNLMGVME 517
QMR MK L G+M+
Sbjct: 418 QMRKMMKQLPGMMK 431
>gi|419431672|ref|ZP_13971812.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|419497447|ref|ZP_14037156.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|421309699|ref|ZP_15760326.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
gi|379600916|gb|EHZ65695.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|379630239|gb|EHZ94829.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|395911120|gb|EJH21989.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
Length = 523
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQTDVPVFALGTEVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAVGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|409387404|ref|ZP_11239634.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
gi|399205505|emb|CCK20549.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
Length = 506
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/431 (47%), Positives = 300/431 (69%), Gaps = 4/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G++ +T+ +++E ++IR ALLEADV+LPVV++F++ + +A+G
Sbjct: 3 FENLTERLQGVFKNLRGKKKITENDVLEITKEIRVALLEADVALPVVKKFIRNIRTRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
V + ++P QQ++KIV +EL ++GG +EL + PT+I++AGLQG GKTT + KLA
Sbjct: 63 VEVSEALQPAQQVIKIVDEELTAILGGGEAELAKSPKIPTIIMMAGLQGAGKTTFAGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK+ + +++A DVYRPAAI+QL +G QV VPVY GT+V P +I + GL A +
Sbjct: 123 KRLKETENARTLMIAADVYRPAAIEQLKTVGSQVDVPVYDEGTDVNPVEIVRHGLALAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K D V++DTAGRL+ID+ +M+EL +K + PTE+LLVVDAMTGQ AA + FN +
Sbjct: 183 KRNDYVLIDTAGRLEIDEKLMNELVQIKDLAQPTEILLVVDAMTGQVAADVAKKFNETLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG I+TKLDGD+RGGAALS++E++GKPIK VG GE++ DLE FYPDRM+ RILGMGD+L
Sbjct: 243 ITGVIITKLDGDTRGGAALSIREITGKPIKFVGTGEKLTDLEVFYPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT- 442
+ +EKAQ + + +M +K+ +FDFNDF++Q V MG + ++ MIPGM +I
Sbjct: 303 TLIEKAQSQFDEAQSAKMAEKMRENSFDFNDFIEQLDQVQSMGPLDEIMKMIPGMSEIPG 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ EK + A + +MTPEER P++L +P RR+R+A SG T +V++L+ Q
Sbjct: 363 AANIKVDEKDIARKRAAVLSMTPEERANPDIL--TPSRRRRIAAGSGNTFIEVNKLIKQF 420
Query: 503 FQMRVRMKNLM 513
+ + M LM
Sbjct: 421 NESKKMMSGLM 431
>gi|333904965|ref|YP_004478836.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
gi|333120230|gb|AEF25164.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
Length = 524
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/431 (46%), Positives = 298/431 (69%), Gaps = 4/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+ +++ E ++IR ALLEADV+LPVV+ F++ + E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSDKDVQEVTKEIRLALLEADVALPVVKTFIKRIRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE+V + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTAILGSETSEIVKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I +GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVEIVTKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+DVK + P E+LLV+D+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVIDSMIGQEAANVADEFNKQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + Q+ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQDYDQQKSLELVEKMRENTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ EK + A++ +MTP ERE PELL +P RR+R+A SG T +V++ +
Sbjct: 363 LANIKVDEKQIARKRAIVSSMTPTERENPELL--NPSRRRRIASGSGNTFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLM 513
Q + M+ +M
Sbjct: 421 NQAKTMMQGMM 431
>gi|298207766|ref|YP_003715945.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
gi|83850404|gb|EAP88272.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
Length = 442
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 292/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRAL++ADV+ + + F V E+A+
Sbjct: 1 MFDSLSDKLDKALHVLKGHGQITEVNVAETLKEVRRALVDADVNYKIAKEFTSTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G G+++ ++P Q +VK+V+DEL +LMGGEV E + P++IL++GLQG GKTT S KL
Sbjct: 61 GQGVLKDLKPGQLMVKLVKDELTELMGGEV-EGINLSGNPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA D+YRPAAI+QL ++GEQ+GV V++ P I+K + AK
Sbjct: 120 ANFLKNKKTKKPLLVACDIYRPAAINQLHVVGEQIGVEVFSDEGNQDPVAISKAAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL +D+AMM E+ ++ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 QNGHNVVIIDTAGRLAVDEAMMTEISNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDTL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVDKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFLKQ + V +MGSM ++GMIPG GK
Sbjct: 300 VSLVERAQEQYDEEEARKLQKKIAKNQFGFDDFLKQIQQVKKMGSMKDLMGMIPGAGK-M 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P ++ S R+KRVA+ SG + Q+V+QL+ Q
Sbjct: 359 MKDIDIDDDAFKGIEAIIHSMTPEERSNPSIINSS--RKKRVAKGSGTSVQEVNQLLKQF 416
>gi|163941583|ref|YP_001646467.1| signal recognition particle protein [Bacillus weihenstephanensis
KBAB4]
gi|229013028|ref|ZP_04170193.1| Signal recognition particle protein [Bacillus mycoides DSM 2048]
gi|229061448|ref|ZP_04198793.1| Signal recognition particle protein [Bacillus cereus AH603]
gi|229134653|ref|ZP_04263462.1| Signal recognition particle protein [Bacillus cereus BDRD-ST196]
gi|229168584|ref|ZP_04296307.1| Signal recognition particle protein [Bacillus cereus AH621]
gi|423489021|ref|ZP_17465703.1| signal recognition particle protein [Bacillus cereus BtB2-4]
gi|423494746|ref|ZP_17471390.1| signal recognition particle protein [Bacillus cereus CER057]
gi|423498462|ref|ZP_17475079.1| signal recognition particle protein [Bacillus cereus CER074]
gi|423518535|ref|ZP_17495016.1| signal recognition particle protein [Bacillus cereus HuA2-4]
gi|423592159|ref|ZP_17568190.1| signal recognition particle protein [Bacillus cereus VD048]
gi|423598844|ref|ZP_17574844.1| signal recognition particle protein [Bacillus cereus VD078]
gi|423661315|ref|ZP_17636484.1| signal recognition particle protein [Bacillus cereus VDM022]
gi|423669419|ref|ZP_17644448.1| signal recognition particle protein [Bacillus cereus VDM034]
gi|423674402|ref|ZP_17649341.1| signal recognition particle protein [Bacillus cereus VDM062]
gi|163863780|gb|ABY44839.1| signal recognition particle protein [Bacillus weihenstephanensis
KBAB4]
gi|228614990|gb|EEK72092.1| Signal recognition particle protein [Bacillus cereus AH621]
gi|228648699|gb|EEL04725.1| Signal recognition particle protein [Bacillus cereus BDRD-ST196]
gi|228717871|gb|EEL69519.1| Signal recognition particle protein [Bacillus cereus AH603]
gi|228748282|gb|EEL98142.1| Signal recognition particle protein [Bacillus mycoides DSM 2048]
gi|401150839|gb|EJQ58291.1| signal recognition particle protein [Bacillus cereus CER057]
gi|401160511|gb|EJQ67889.1| signal recognition particle protein [Bacillus cereus CER074]
gi|401160743|gb|EJQ68118.1| signal recognition particle protein [Bacillus cereus HuA2-4]
gi|401232292|gb|EJR38794.1| signal recognition particle protein [Bacillus cereus VD048]
gi|401237114|gb|EJR43571.1| signal recognition particle protein [Bacillus cereus VD078]
gi|401298546|gb|EJS04146.1| signal recognition particle protein [Bacillus cereus VDM034]
gi|401301356|gb|EJS06945.1| signal recognition particle protein [Bacillus cereus VDM022]
gi|401309953|gb|EJS15286.1| signal recognition particle protein [Bacillus cereus VDM062]
gi|402432269|gb|EJV64328.1| signal recognition particle protein [Bacillus cereus BtB2-4]
Length = 449
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/435 (47%), Positives = 308/435 (70%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +M EL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMGELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKVEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|449882056|ref|ZP_21784753.1| signal recognition particle protein [Streptococcus mutans SA38]
gi|449924256|ref|ZP_21799534.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449163079|gb|EMB66194.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449250610|gb|EMC48663.1| signal recognition particle protein [Streptococcus mutans SA38]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|423511879|ref|ZP_17488410.1| signal recognition particle protein [Bacillus cereus HuA2-1]
gi|402450140|gb|EJV81974.1| signal recognition particle protein [Bacillus cereus HuA2-1]
Length = 449
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/435 (47%), Positives = 308/435 (70%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +M EL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMGELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKIEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|418962676|ref|ZP_13514530.1| signal recognition particle protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345211|gb|EID23344.1| signal recognition particle protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 302/439 (68%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ G +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I QGLE+AK
Sbjct: 123 NKLKKEEGARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAVEIVHQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDERLMNELRDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKTLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPVERENPDLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKSVMQ---GVMSG 433
>gi|422865505|ref|ZP_16912130.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
gi|327489572|gb|EGF21364.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
Length = 524
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISENDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ K+ +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEKARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M +I M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + E+ + A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 362 ALKNFKVDEREIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|450182820|ref|ZP_21888463.1| signal recognition particle protein [Streptococcus mutans 24]
gi|449244145|gb|EMC42531.1| signal recognition particle protein [Streptococcus mutans 24]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/436 (46%), Positives = 298/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLHGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ E + A++ +MTPEERE P LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEDEIARKRAIVSSMTPEERENPNLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|449918559|ref|ZP_21797416.1| signal recognition particle protein [Streptococcus mutans 1SM1]
gi|449160184|gb|EMB63462.1| signal recognition particle protein [Streptococcus mutans 1SM1]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/436 (46%), Positives = 299/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ E + A++ +MTPEERE P LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEDEIARKRAIVSSMTPEERENPNLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|260886927|ref|ZP_05898190.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|330839284|ref|YP_004413864.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|260862989|gb|EEX77489.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|329747048|gb|AEC00405.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
Length = 456
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 293/423 (69%), Gaps = 6/423 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KL+G LT++++ E MR++R ALLEADV+ VV+ F++ V E+AV
Sbjct: 2 IFESLADRLQQTFKKLRGHGKLTEDDVNEAMREVRMALLEADVNFKVVKDFIKKVKERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +EL +LMGG S L + PTVI++AGLQG GKTT + KL
Sbjct: 62 GQDVLDTLTPAQVVIKIVDEELTELMGGTQSRLNISSVPPTVIMMAGLQGAGKTTSAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKKQGK +LVA D+YRPAA+ QL +LGEQ+G+PV++ IA+ ++ A+
Sbjct: 122 GLSLKKQGKKPLLVAADIYRPAAVKQLQVLGEQLGIPVFSMPQGTDAVTIARSSIDHARS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL ID+ +M ELKD+K + P E+LLVVDAMTGQ+A + +FN +G
Sbjct: 182 HINDVVIIDTAGRLHIDEKLMQELKDIKADVKPHEILLVVDAMTGQDAVNVAESFNEGLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALSVK V+G PIK VG GE++E LEPF+PDRMA RILGMGDVL
Sbjct: 242 IDGVVLTKLDGDARGGAALSVKAVTGCPIKFVGMGEKLEALEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---- 439
S +EKAQ E+A++M+KK+ A+F +DFL Q + V ++GS +++GMIPGMG
Sbjct: 302 SLIEKAQSTFDAEEAKKMEKKLRKADFTLDDFLAQMQKVRKLGSFEQILGMIPGMGGLKK 361
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
++ + K ++ +EA+I++MTP+ER ++ S RRKR+A SG Q V++L+
Sbjct: 362 QLQGQDIDLNGKEVRRIEAIIKSMTPKERADISIINGS--RRKRIALGSGTRVQDVNKLL 419
Query: 500 AQL 502
Q
Sbjct: 420 KQF 422
>gi|449937443|ref|ZP_21804559.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|450077600|ref|ZP_21850546.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|450154315|ref|ZP_21877665.1| signal recognition particle protein [Streptococcus mutans 21]
gi|449164238|gb|EMB67305.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|449211007|gb|EMC11429.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|449237922|gb|EMC36717.1| signal recognition particle protein [Streptococcus mutans 21]
Length = 512
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|450109576|ref|ZP_21861516.1| signal recognition particle protein [Streptococcus mutans SM6]
gi|449225932|gb|EMC25497.1| signal recognition particle protein [Streptococcus mutans SM6]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|449994935|ref|ZP_21822829.1| signal recognition particle protein [Streptococcus mutans A9]
gi|450009858|ref|ZP_21828384.1| signal recognition particle protein [Streptococcus mutans A19]
gi|450023214|ref|ZP_21830478.1| signal recognition particle protein [Streptococcus mutans U138]
gi|450116481|ref|ZP_21864528.1| signal recognition particle protein [Streptococcus mutans ST1]
gi|449184857|gb|EMB86770.1| signal recognition particle protein [Streptococcus mutans A9]
gi|449190757|gb|EMB92311.1| signal recognition particle protein [Streptococcus mutans A19]
gi|449193916|gb|EMB95286.1| signal recognition particle protein [Streptococcus mutans U138]
gi|449226962|gb|EMC26427.1| signal recognition particle protein [Streptococcus mutans ST1]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|449965794|ref|ZP_21812028.1| signal recognition particle protein [Streptococcus mutans 15VF2]
gi|449170924|gb|EMB73611.1| signal recognition particle protein [Streptococcus mutans 15VF2]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|450034650|ref|ZP_21834504.1| signal recognition particle protein [Streptococcus mutans M21]
gi|449196176|gb|EMB97461.1| signal recognition particle protein [Streptococcus mutans M21]
Length = 516
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|199597126|ref|ZP_03210558.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|258508639|ref|YP_003171390.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|385828300|ref|YP_005866072.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|199591930|gb|EDZ00005.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|257148566|emb|CAR87539.1| Signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|259649945|dbj|BAI42107.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
Length = 478
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/445 (46%), Positives = 305/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ ++ + MR+IR ALLEADV+ VV+ F++ V +AVG
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDVRDAMREIRLALLEADVNFDVVKTFIKNVRTKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 SEVLESLTPAQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + K+ +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+ P +I +QGL AK+
Sbjct: 123 KYLMENEKARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDTDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMTELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A+EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKTYDEKQAQEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+ L +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPKEREDPDSL--NPSRRRRIAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|209360587|gb|ACI42964.1| signal recognition particle protein [Lactobacillus casei]
Length = 478
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 305/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQGVGKTT KL+
Sbjct: 63 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGVGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ER P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQERGDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|222153046|ref|YP_002562223.1| signal recognition particle protein [Streptococcus uberis 0140J]
gi|222113859|emb|CAR41999.1| signal recognition particle protein [Streptococcus uberis 0140J]
Length = 521
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/436 (46%), Positives = 301/436 (69%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ + E+A+G
Sbjct: 3 FESLTERLQGVFKAIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRIRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL +++G E +E+V + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTQILGSETAEIVKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I +GLE A+
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVEIVTKGLELARD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDDKLMAELRDIKALANPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + Q+ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDQQRSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ EK + A++ +MT EERE PELL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDEKQIARKRAIVSSMTKEERENPELL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKAMMQ---GVMSG 433
>gi|423367889|ref|ZP_17345321.1| signal recognition particle protein [Bacillus cereus VD142]
gi|401082750|gb|EJP91015.1| signal recognition particle protein [Bacillus cereus VD142]
Length = 449
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/435 (47%), Positives = 308/435 (70%), Gaps = 8/435 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ F++ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKIVQEELTELMGGEQSKIAVANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDKVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +M EL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMGELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKVEREQPEIINAS--RKKRIAKGSGTTVQEINRLIK 418
Query: 501 QLFQMRVRMKNLMGV 515
Q M+ MK + G+
Sbjct: 419 QFDDMKKMMKTMTGM 433
>gi|424841015|ref|ZP_18265640.1| signal recognition particle protein [Saprospira grandis DSM 2844]
gi|395319213|gb|EJF52134.1| signal recognition particle protein [Saprospira grandis DSM 2844]
Length = 447
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 297/446 (66%), Gaps = 6/446 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+AA+ L G+ LT+ N+ ++ IRRAL++ADV+ + + F V ++A+
Sbjct: 1 MFSNLQDNLDAAFKNLSGDGKLTEINVATSVKAIRRALVDADVNYKIAKSFTDKVKDEAL 60
Query: 144 GV-GLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAK 202
G +++ VRP +VKIV+DELV+LMGG+ + K+ P ++L+AGLQG GKTT + K
Sbjct: 61 GKRNVLKSVRPGDLMVKIVQDELVELMGGQAVGINI-KANPGIVLIAGLQGSGKTTFTGK 119
Query: 203 LANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
L+ +LK K+ K M++A DVYRPAAI+QL ++ EQVGV +Y P +IA G+ EA
Sbjct: 120 LSRHLKNKRSKKVMVIACDVYRPAAINQLAVVAEQVGVDIYKEMDNKNPVEIALNGIAEA 179
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
KK DVVIVDTAGRL +D+ MM E+ VK + PTE L VVD+MTGQ+A FN
Sbjct: 180 KKGKYDVVIVDTAGRLAVDEEMMTEIAAVKEAIQPTETLFVVDSMTGQDAVNTAKAFNDR 239
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
I G +LTKLDGD+RGGAALS+K GKPIK + GE+M+ L+ F+PDRMA RILGMGD
Sbjct: 240 INYDGVVLTKLDGDTRGGAALSIKYTVGKPIKFISMGEKMDTLDIFHPDRMAQRILGMGD 299
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
++S VEKAQE +++A+ ++KKI FDFNDFLKQ + +MG++ +IGMIPGMGKI
Sbjct: 300 IISLVEKAQEDFDEKEAKRLEKKIRKNEFDFNDFLKQLAQIRKMGNLKSLIGMIPGMGKI 359
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ + + +EA+I +MTPEERE P ++ S R+KR+A+ SG ++++Q + Q
Sbjct: 360 AK-DIDIDDNAFNKIEAIILSMTPEERENPGVINGS--RKKRIAKGSGNRVEEINQFLRQ 416
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR M + + GG + N+
Sbjct: 417 FEQMRKMMFQMSKMQAGGGNMRMPNI 442
>gi|194336566|ref|YP_002018360.1| signal recognition particle protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309043|gb|ACF43743.1| signal recognition particle protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 449
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/437 (50%), Positives = 294/437 (67%), Gaps = 5/437 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEA + KL G+ T+ + NI MRDI+RALL ADV+ V ++ + + E+++
Sbjct: 1 MFDSLSDKLEATFKKLAGQATINEINIGLAMRDIKRALLGADVNYKVAKKLIDDIREKSL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAK 202
G +I+ V P Q +VKIV DEL +LMGGE L + K P VI++AGLQG GKTT AK
Sbjct: 61 GEQVIKSVSPAQMIVKIVYDELTELMGGEQKPLNLSPKKLPAVIMVAGLQGSGKTTFCAK 120
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LA LKK GK MLVA DVYRPAAIDQL LG+QV VPV+ A E + A QGLE A+
Sbjct: 121 LALRLKKSGKQPMLVAADVYRPAAIDQLKALGQQVDVPVF-AIEEQDAMKAALQGLEAAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVIVDTAGRLQID+ MM E + +K L P E+L VVD+M GQEA FN +
Sbjct: 180 SAAKDVVIVDTAGRLQIDQVMMAEAESLKHALKPDELLFVVDSMMGQEAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGDSRGGAALS+++V KPIK + GE+++DL+ FYPDRMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDSRGGAALSIRQVVEKPIKFISIGEKVDDLDLFYPDRMAQRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+SFVEKAQE + E + EMQKK+M FD NDF Q + + +MGS+ +I M+PG+ K+
Sbjct: 300 VSFVEKAQENLDLEKSLEMQKKLMKNEFDLNDFFDQLQQLKKMGSIQGLIEMVPGLNKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
P Q E K +EAMI +MT +E+ P+++ S RR+R+A+ SG Q+V+ L+ Q
Sbjct: 360 PKQDLE-NLDFKPIEAMINSMTKQEKMTPDIINGS--RRQRIARGSGTKVQEVNLLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGG 519
+M+ M+++ + + G
Sbjct: 417 GEMKKMMRSVSKLSQSG 433
>gi|255524258|ref|ZP_05391217.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296185380|ref|ZP_06853790.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|255512083|gb|EET88364.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296050214|gb|EFG89638.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
Length = 454
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/417 (47%), Positives = 298/417 (71%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ KL+G+ L++++I + MR+++ ALLEADV+ VV+ F++ VSE+ +G
Sbjct: 3 FEGLASKLQETLKKLRGKGKLSEKDIKDAMREVKLALLEADVNYKVVKDFIKKVSEKCLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV DEL LMG S + F+ S T+I+L GLQG GKTT++ KLA
Sbjct: 63 EEVLKSLTPAQQVVKIVNDELSNLMGSTESGVQFSSSGLTMIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+K+ K +L A D+YRPAAI QL ++G+Q+ VPV+ G +V P I+K +E AK
Sbjct: 123 LQFRKKNKKPLLAACDIYRPAAIKQLQVVGKQIDVPVFAMGDKVSPVDISKGAIEYAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++VVI+DTAGRL ID+ +M+ELKDVK + P E+LLVVDAMTGQ+A + +FN ++ I
Sbjct: 183 GLNVVIIDTAGRLHIDEELMNELKDVKENVKPDEILLVVDAMTGQDAVNVANSFNDQLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K ++ KPIK VG GE+M D E F+PDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKAMTDKPIKFVGLGEKMSDFEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKA++ + +E+A+++ ++MS F+ DFL + + +MG M++++ M+PG+ ++
Sbjct: 303 LIEKAKQSIDEEEAKKIGSRMMSQEFNLEDFLSSMKQIKKMGPMNKLLEMVPGLNTKELQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ +EK + +EA+I +MT +ER P L++ SP R+KR++Q SG T QQV++++
Sbjct: 363 GVDLSGSEKEMAKIEAIISSMTVKERRNPSLVSGSPSRKKRISQGSGTTVQQVNKIL 419
>gi|347525650|ref|YP_004832398.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
gi|345284609|gb|AEN78462.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
Length = 493
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/446 (46%), Positives = 307/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KLK + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +AVG
Sbjct: 15 FEGLTERLQNAISKLKRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKEVKNRAVG 74
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL+K+MG L +K PTVI++ GLQG GKTT + KLA
Sbjct: 75 AEVLESLTPAQQIVKIVNEELIKVMGESAVSLNKSKKIPTVIMMVGLQGAGKTTTAGKLA 134
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ + +++A DVYRPAA+DQL +G+ + VPV+ GT+V P +I +QG++ A++
Sbjct: 135 YKLKKEENARPLMIAADVYRPAAVDQLKTVGKSIDVPVFELGTDVDPVEIVRQGMKLAEE 194
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL +K + +P E+LL VD+MTGQ A + FN +
Sbjct: 195 QKNDYVIIDTAGRLQIDEKLMNELARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLD 254
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M L+ FYPDRMA RILGMGD+L
Sbjct: 255 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTALDVFYPDRMASRILGMGDML 314
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ K+ FDFNDF++Q V MG + ++ MIPGM P
Sbjct: 315 TLIEKAQQDFDQKKAEELADKMRENTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NP 373
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ K ++ +A++ +MTP+ERE P++L +P RR+R+A SG+ Q+V++++ Q
Sbjct: 374 ALKNVKVDPKDIEHTKAIVYSMTPDEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQ 431
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR ++M M G+ + N+
Sbjct: 432 FKQMR----DMMQKMTNGNFGGMENM 453
>gi|366089288|ref|ZP_09455761.1| signal recognition particle protein [Lactobacillus acidipiscis KCTC
13900]
Length = 477
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 307/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +AVG
Sbjct: 3 FEGLTERLQNAIGKLRRKGKISESDVKEVMREIRLALLEADVNFGVVKDFVKTVRGRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +ELVK+MG + L + PTVI++ GLQG GKTT ++KLA
Sbjct: 63 AEILESLTPAQQIVKIVNEELVKVMGEQAVPLNKSPKIPTVIMMVGLQGAGKTTTASKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +++A DVYRPAAIDQL LG + +PV+ GT+V P +I ++GL+ A++
Sbjct: 123 LKLKNEQNARPLMIAADVYRPAAIDQLKTLGAENDLPVFDMGTDVSPVKIVEEGLKVAEE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M EL D++++ +P EVLL VD+MTGQ A + FN ++
Sbjct: 183 NKNDYVFIDTAGRLQIDEKLMQELADIQKLASPDEVLLTVDSMTGQNATEVAEGFNEQLN 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD++
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMADLDVFYPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ ++ A+++Q+K+ + FDFNDFL+Q V MGSM ++ MIPGM +
Sbjct: 303 TLIEKAQRDYDEKKAQDLQEKMRANTFDFNDFLEQLDQVQNMGSMEDIMKMIPGMANNSA 362
Query: 444 AQVREAE-KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K + +A++ +MTP+ERE P++L P RR+R+A SG++ Q+V++L+ Q
Sbjct: 363 LKNASIDPKDMDHTKAIVYSMTPQEREDPDIL--KPSRRRRIAAGSGRSVQEVNRLIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
QMR ++M + G+ + NL
Sbjct: 421 KQMR----DMMAKVSNGNFSGMENL 441
>gi|398304074|ref|ZP_10507660.1| signal recognition particle protein [Bacillus vallismortis DV1-F-3]
Length = 446
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 317/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEESKIAAAKKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTSVKEIANPEEIFLVVDSMTGQDAVNVAQSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVREKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|310641514|ref|YP_003946272.1| signal recognition (srp) component [Paenibacillus polymyxa SC2]
gi|386040545|ref|YP_005959499.1| signal recognition particle 54 kDa protein 2 SRP54 [Paenibacillus
polymyxa M1]
gi|309246464|gb|ADO56031.1| Signal recognition (SRP) component [Paenibacillus polymyxa SC2]
gi|343096583|emb|CCC84792.1| signal recognition particle 54 kDa protein 2 SRP54 [Paenibacillus
polymyxa M1]
Length = 458
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 306/447 (68%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L++ L+ ++KL+G+ ++++++ + MR++R ALLEADV+ VV+ F+ V E++VG
Sbjct: 3 FEGLSTRLQNVFSKLRGKGKVSEDDVAQAMREVRLALLEADVNFKVVKDFIAKVKEKSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L A PTVI++ GLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL ILGEQ+ PV+T G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNHRPLLVAGDIYRPAAIKQLQILGEQINAPVFTLGDQTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+EL+ + + P EVLLVVD+MTGQ+A + FN + +
Sbjct: 183 GNDYVIIDTAGRLHVDEELMEELRQIHTNVKPDEVLLVVDSMTGQDAVNVAEHFNNSLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ +EPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMG +
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ +K + +EA++ +MT +E++ P+++ S RRKR+A SG + +V++L+ Q
Sbjct: 363 KDIKVDDKQMGRIEAIVHSMTKQEKQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG AL L+
Sbjct: 421 EMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|344201963|ref|YP_004787106.1| signal recognition particle protein [Muricauda ruestringensis DSM
13258]
gi|343953885|gb|AEM69684.1| signal recognition particle protein [Muricauda ruestringensis DSM
13258]
Length = 442
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/420 (49%), Positives = 287/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSEKLDKALHVLKGHGQITEINVAETLKEVRRALLDADVNFKIAKEFTNTVKEKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL +LMGGE +E + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTSLQPGQLMVKLVKDELTELMGGE-AEGIDLSGDPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAIDQL ++G+Q+GV VY+ P IAK G+ AK
Sbjct: 120 ANYLKNKKTKKPLLVACDVYRPAAIDQLHVVGDQIGVEVYSDRENNDPVAIAKAGIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K +VVI+DTAGRL +D+ MM E+ ++ + + P E L VVD+MTGQ+A TFN +
Sbjct: 180 SKGCNVVIIDTAGRLAVDEQMMTEISNIHKAIKPQETLFVVDSMTGQDAVNTAKTFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ F+P RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVDKPIKFIGTGEKMEAIDVFHPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL Q + + +MG+M ++GMIPG GK
Sbjct: 300 VSLVERAQEQFDEEQARKIQKKIAKNKFGFDDFLSQIQQIKKMGNMKDLMGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P L S R+KR+A SG + Q+V+QL+ Q
Sbjct: 360 KG-LDIDDDAFKHIEAIIHSMTPEERSTPAKLNAS--RKKRIAAGSGTSIQEVNQLLKQF 416
>gi|319646021|ref|ZP_08000251.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
gi|317391771|gb|EFV72568.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
Length = 451
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/436 (48%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ +T++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVTEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVKEELTELMGGEESKIAAAKRPPTVIMMVGLQGAGKTTSTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK ++ +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRNPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDKVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL+ VK P E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELEQVKETAQPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VTGVILTKLDGDTRGGAALSIRAVTNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V MG + +I M+PG GK+
Sbjct: 303 TLIEKAQANVDEEKAKELEQKMKNMSFTLDDFLEQLGQVRNMGPLEDLIQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I++MT +E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNVKVDEKQLSHIEAIIKSMTGKEKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 EEMKKMMKQMTNMTKG 436
>gi|51892603|ref|YP_075294.1| signal recognition particle protein [Symbiobacterium thermophilum
IAM 14863]
gi|51856292|dbj|BAD40450.1| signal recognition particle [Symbiobacterium thermophilum IAM
14863]
Length = 454
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/435 (50%), Positives = 309/435 (71%), Gaps = 9/435 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A+ +L+G+ LT+ ++ E +R++R ALLEADV+ VV+ F+ V E+AV
Sbjct: 1 MFESLQERLQEAFKRLRGKGKLTESDVNEALREVRLALLEADVNFKVVKSFIARVKERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +ELV LMGGE L A PT+I+L GLQG GKTT +AKL
Sbjct: 61 GQEILESLNPAQMVIKIVYEELVALMGGESVGLNMADRPPTIIMLCGLQGAGKTTHAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKK+GK +LVA DVYRPAAI QL +LGEQVGVPVY+ G + P IA+ + A +
Sbjct: 121 ALKLKKEGKKPLLVAADVYRPAAIKQLEVLGEQVGVPVYSEGDQASPVDIAQHAVAYAAE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ DV+IVDTAGRL ID+ +M+EL+ +K + P + LLV+DAM GQ+A F+ ++G
Sbjct: 181 ERRDVIIVDTAGRLTIDEELMEELQQIKARIQPHDTLLVLDAMIGQDAVTTAEHFHTKLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALSV+EV+G+PIK VG GE+++ LEPFYPDR+A RILGMGDVL
Sbjct: 241 IDGVILTKLDGDTRGGAALSVREVTGRPIKFVGVGEKLDALEPFYPDRLASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE + ++ AEEM +K++ A FDF DFL+Q R + RMG + ++ M+PG+G
Sbjct: 301 TLIEKAQEQVDRKQAEEMARKMLKAQFDFEDFLEQLRALQRMGPLQDILKMLPGVG---- 356
Query: 444 AQVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
AQ+++ EK LK +EA+I +MTP+ER P+++ + RR+R+A+ SG+ +V +L+
Sbjct: 357 AQLKDINIDEKELKHIEAIILSMTPKERRNPDII--NVRRRERIARGSGRPIAEVHRLIK 414
Query: 501 QLFQMRVRMKNLMGV 515
Q Q R MK L G+
Sbjct: 415 QFEQTRKLMKQLGGM 429
>gi|253755628|ref|YP_003028768.1| signal recognition particle protein [Streptococcus suis BM407]
gi|251818092|emb|CAZ55886.1| signal recognition particle protein [Streptococcus suis BM407]
Length = 512
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE++ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK++ + +L+A D+YRPAAIDQL LG+Q+ VPV+ G +V +I +QGLE+AK
Sbjct: 123 NKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL+++K P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDQALMTELREIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLA 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV+ ++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVILTKIDGDTRGGAALSVRHITGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASKEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANLKVDEREIARKRAIVSSMTPAERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKTMMQ---GVMSG 433
>gi|445118837|ref|ZP_21379078.1| signal recognition particle protein [Prevotella nigrescens F0103]
gi|444839514|gb|ELX66576.1| signal recognition particle protein [Prevotella nigrescens F0103]
Length = 450
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/445 (47%), Positives = 300/445 (67%), Gaps = 5/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V ++A+
Sbjct: 1 MFENLSDRLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKSFTDTVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL KLMGGE L +++P +IL++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAKLMGGESVGLKI-ENKPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +LVA DVYRPAAI QL ++GE V VPVY+ + IA+ +++AK
Sbjct: 120 ANLLKTKEHKKPLLVACDVYRPAAIQQLKVVGESVDVPVYSEPDSKNVNAIAENAIKQAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGRL +D MM E++ +K ++P E+L VVD+MTGQ+A FN +
Sbjct: 180 ANGNDVVIIDTAGRLAVDAEMMGEIESLKEHVSPDEILFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE+M+ L+ F+P RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVTKPIKFIGTGEKMDALDVFHPTRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI+ FDFNDF Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQFDEEEAKRLQKKILKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q
Sbjct: 360 -RDVDIDDNAFKGIEAIIQSMTPKERTSPEVLNNS--RRQRIAKGSGTNIQEVNRLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q R MK + G G + + N+
Sbjct: 417 EQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|407977615|ref|ZP_11158452.1| signal recognition particle protein [Bacillus sp. HYC-10]
gi|407415868|gb|EKF37449.1| signal recognition particle protein [Bacillus sp. HYC-10]
Length = 446
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/436 (48%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTELMGGEESKIAVAKKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + M+VA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMMVAADIYRPAAIQQLQTLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID+ +M EL+ VK V NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHHDYVILDTAGRLHIDEELMGELQKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAALGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + Q+ A+E+++K+ + +F +DFL+Q V MG + +I M+PG GK+
Sbjct: 303 TLIEKAQANVDQDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I++MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNVQVDEKQLNHIEAIIKSMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|312143704|ref|YP_003995150.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
gi|311904355|gb|ADQ14796.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
Length = 445
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/432 (47%), Positives = 296/432 (68%), Gaps = 7/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ ++KL+G+ L++ ++ +++++ ALLEADV+ VV+RFV + E+AV
Sbjct: 2 IFSNLAEKLQDTFDKLRGKGKLSESDVKSALKEVKMALLEADVNYKVVKRFVNKIEERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +E+ LMGG E+ + PT+I++ GLQG GKTT + KL
Sbjct: 62 GKEVMDSLTPAQQVIKIVNEEMQNLMGGSQEEINISPDPPTIIMMVGLQGSGKTTSAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L +GK+ +LVA DVYRPAAI QL +LGE++ +PV++ G + P IAK + A
Sbjct: 122 ARMLSNKGKNPLLVAADVYRPAAIRQLQVLGERLDLPVFSMGEDSDPVDIAKGSINFAST 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N D +I+DTAGRL ID+ MM+EL+ +K ++P E+LLVVDAMTGQ+A + F+ +
Sbjct: 182 HNCDTIILDTAGRLHIDQEMMEELEGIKGAVDPDEILLVVDAMTGQDAVNVAQNFDKRLD 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTK+DGD+RGGAALS+KE++GKPIK G GE++ DLEPF+PDRMA RILGMGDVL
Sbjct: 242 IDGILLTKMDGDARGGAALSIKEITGKPIKFAGTGEKLADLEPFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---K 440
+EKA++ + +E A+ +++KI F DF++Q V MG M ++GMIPGMG +
Sbjct: 302 GLIEKAEKSIDKEKAKALEEKIRKNEFTLEDFMEQMSQVRNMGPMDELLGMIPGMGGAKQ 361
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ QV +K L +EA+I +MTPEER KP+++ S RRKR+AQ SG Q V++L+
Sbjct: 362 LKNLQVD--DKQLDHIEAIISSMTPEERRKPDIINGS--RRKRIAQGSGTKIQDVNRLLK 417
Query: 501 QLFQMRVRMKNL 512
Q Q + MK L
Sbjct: 418 QFRQTKKMMKKL 429
>gi|422823584|ref|ZP_16871772.1| signal recognition particle protein [Streptococcus sanguinis SK405]
gi|324992911|gb|EGC24831.1| signal recognition particle protein [Streptococcus sanguinis SK405]
Length = 524
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISENDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ A PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKAPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|449891169|ref|ZP_21787773.1| signal recognition particle protein [Streptococcus mutans SF12]
gi|449256864|gb|EMC54676.1| signal recognition particle protein [Streptococcus mutans SF12]
Length = 516
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMIGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|288905279|ref|YP_003430501.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
gi|288732005|emb|CBI13570.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
Length = 521
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K + +++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKDENARPLMIAADIYRPAAIDQLKTLGNQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEKLMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVLSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|403061474|ref|YP_006649690.1| signal recognition particle protein [Streptococcus suis S735]
gi|402808800|gb|AFR00292.1| signal recognition particle protein [Streptococcus suis S735]
Length = 512
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE++ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK++ + +L+A D+YRPAAIDQL LG+Q+ VPV+ G +V +I +QGLE+AK
Sbjct: 123 NKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL+++K P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDQALMTELREIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLA 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV+ ++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVILTKIDGDTRGGAALSVRHITGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASKEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANLKVDEREIARKRAIVSSMTPAERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKTMMQ---GVMSG 433
>gi|374582903|ref|ZP_09655997.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
gi|374418985|gb|EHQ91420.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
Length = 453
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 298/429 (69%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LKG+ L + ++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSEKLQETFKRLKGKGKLKESDVNEAMREVRVALLEADVNFKVVKDFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++KIV +E+++LMGG +++ + PT+ILL GLQG GKTT +AKL
Sbjct: 61 GQEVLESLSPAQHVIKIVHEEMIELMGGATGKILISSKPPTIILLIGLQGAGKTTHAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LG Q+ VPV++ G E P IAK + A +
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLQVLGGQLNVPVFSMGQEA-PRDIAKASIAHANQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +M EL+D+K + P E+LLVVDAMTGQ+A + +F+ E+G
Sbjct: 180 NGQDVVIIDTAGRLHINEELMGELRDIKSAVKPHEILLVVDAMTGQDAVNVAESFHNELG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGG ALS+K V+G IK VG GE+M+ LEPF+PDRMA RILGMGDVL
Sbjct: 240 LDGVILTKLDGDTRGGGALSIKAVTGCTIKFVGIGEKMDALEPFHPDRMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE ++ A+EM++K+ F +DFL Q + +MG +S ++ MIPG+GK
Sbjct: 300 TLIEKAQESFDEKKAKEMEQKLRKQEFTLDDFLDQMEQMKKMGPLSSILEMIPGVGK-QA 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
++ EK +EA+I +MT EER KP ++ +S R+KR+A+ SG + Q V +L+ Q
Sbjct: 359 KDIKIDEKDTAHVEAIIRSMTTEERRKPVIIKDS--RKKRIAKGSGTSVQDVGRLLKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|16078661|ref|NP_389480.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|221309473|ref|ZP_03591320.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. 168]
gi|221313798|ref|ZP_03595603.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221318722|ref|ZP_03600016.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221322993|ref|ZP_03604287.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321315364|ref|YP_004207651.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|402775843|ref|YP_006629787.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|418033256|ref|ZP_12671733.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|452914716|ref|ZP_21963343.1| signal recognition particle protein [Bacillus subtilis MB73/2]
gi|586037|sp|P37105.1|SRP54_BACSU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|2309080|dbj|BAA21691.1| Ffh [Bacillus subtilis]
gi|2633970|emb|CAB13471.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|320021638|gb|ADV96624.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|351469404|gb|EHA29580.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402481025|gb|AFQ57534.1| Signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|407959004|dbj|BAM52244.1| signal recognition particle-like (SRP) GTPase [Synechocystis sp.
PCC 6803]
gi|407964581|dbj|BAM57820.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
BEST7003]
gi|452117136|gb|EME07531.1| signal recognition particle protein [Bacillus subtilis MB73/2]
Length = 446
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|379731428|ref|YP_005323624.1| signal recognition particle protein [Saprospira grandis str. Lewin]
gi|378577039|gb|AFC26040.1| signal recognition particle protein [Saprospira grandis str. Lewin]
Length = 447
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/446 (47%), Positives = 297/446 (66%), Gaps = 6/446 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+AA+ L G+ LT+ N+ ++ IRRAL++ADV+ + + F V E+A+
Sbjct: 1 MFSNLQDNLDAAFKNLSGDGKLTEINVATSVKAIRRALVDADVNYKIAKSFTDKVKEEAL 60
Query: 144 GV-GLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAK 202
G +++ VRP +VKIV+DELV+LMGG+ S + K+ P ++L+AGLQG GKTT + K
Sbjct: 61 GKRNVLKSVRPGDLMVKIVQDELVELMGGQ-SVGINIKANPGIVLIAGLQGSGKTTFTGK 119
Query: 203 LANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
L+ +LK K+ K M++A DVYRPAAI+QL ++ EQVGV +Y P +IA G+ EA
Sbjct: 120 LSRHLKNKRNKKVMVIACDVYRPAAINQLAVVAEQVGVDIYKEMDNKNPVEIALNGIAEA 179
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
KK DVVIVDTAGRL +D+ MM E+ VK + PTE L VVD+MTGQ+A FN
Sbjct: 180 KKGKYDVVIVDTAGRLAVDEEMMTEIAAVKEAIQPTETLFVVDSMTGQDAVNTAKAFNDR 239
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
I G +LTKLDGD+RGGAALS+K GKPIK + GE+M+ L+ F+PDRMA RILGMGD
Sbjct: 240 INYDGVVLTKLDGDTRGGAALSIKYTVGKPIKFISMGEKMDTLDIFHPDRMAQRILGMGD 299
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
++S VEKAQE +++A+ ++KKI FDFNDFLKQ + +MG++ +IGMIPGMGKI
Sbjct: 300 IISLVEKAQEDFDEKEAKRLEKKIRKNQFDFNDFLKQLAQIRKMGNLKSLIGMIPGMGKI 359
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ + + +EA+I +MTPEER P ++ S R+KR+A+ SG ++++Q + Q
Sbjct: 360 AK-DIDIDDNAFNKIEAIILSMTPEERGNPGVINGS--RKKRIAKGSGNRVEEINQFLRQ 416
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR M + + GG + N+
Sbjct: 417 FEQMRKMMFQMSKMQAGGGNMRMPNI 442
>gi|450071676|ref|ZP_21848262.1| signal recognition particle protein [Streptococcus mutans M2A]
gi|449212110|gb|EMC12488.1| signal recognition particle protein [Streptococcus mutans M2A]
Length = 516
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTDHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|120603184|ref|YP_967584.1| signal recognition particle protein [Desulfovibrio vulgaris DP4]
gi|120563413|gb|ABM29157.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfovibrio vulgaris DP4]
Length = 508
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/443 (46%), Positives = 300/443 (67%), Gaps = 6/443 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L A+ K G+ L + NI E +R++R ALLEADV+ VV+ F+ V E+ +
Sbjct: 1 MFDSLSDRLTQAFRKFSGQSQLDENNIQEGLREVRLALLEADVNFKVVKDFIDRVKERCL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VK+V DELV+L+GG +EL ++P VI++ GLQG GKTT SAK+
Sbjct: 61 GQDVLKSLTPAQQVVKVVHDELVELLGGGTTELDLRGAQPGVIMMVGLQGSGKTTSSAKI 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+K+ LV DVYRPAAIDQLV L Q+ +P Y + ++KP I + L +AK+
Sbjct: 121 ANLLRKRKMRPYLVPVDVYRPAAIDQLVTLARQLDIPYYQSTPDMKPLDIVRAALADAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K V++DTAGRL +D+A+MDEL +K +P E+L V DAMTGQ+A + FN ++G
Sbjct: 181 KQCTAVLLDTAGRLHVDEALMDELAALKATFSPQEILFVADAMTGQDAVTVADAFNEKLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS+K V+G +K VG GE++ D+E F+PDR+AGRILGMGD+L
Sbjct: 241 ITGVVLTKMDGDARGGAALSIKSVTGASVKYVGIGEKLSDIEVFHPDRVAGRILGMGDML 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ ++ ++AE + KK A+FD DF Q R + ++GS+ ++ MIPGMG +
Sbjct: 301 TLIEKAQSTIEADEAEALTKKFQRASFDLEDFRTQMRRMKKLGSLEGILKMIPGMGALRD 360
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
Q+ EK + +EA+I +MT +ER P+++ S RR R+A+ SG T Q+V+QL+
Sbjct: 361 KLGQMSVPEKDMARIEAIISSMTMKERRNPDVINGS--RRARIAKGSGTTVQEVNQLLRN 418
Query: 502 LFQMRVRMKNLMGVME--GGSLP 522
QMR MK +M + + GG +P
Sbjct: 419 FEQMREMMKRVMNMGKPGGGRMP 441
>gi|418964864|ref|ZP_13516652.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383344265|gb|EID22434.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 524
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 303/439 (69%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRMALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEAARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MGSM ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGSMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKSVMQ---GVMSG 433
>gi|423283582|ref|ZP_17262466.1| signal recognition particle protein [Bacteroides fragilis HMW 615]
gi|404580868|gb|EKA85575.1| signal recognition particle protein [Bacteroides fragilis HMW 615]
Length = 439
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/442 (47%), Positives = 295/442 (66%), Gaps = 5/442 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E + K +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVE-IDTKGQPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EA+
Sbjct: 120 ARMLKTKKNKRPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEIDSKDPVSIAQNAIKEAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K + P E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQISQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERSNPGILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPAL 524
Q R MK + G +P +
Sbjct: 417 DQTRKMMKMVTSSKIGKMMPKM 438
>gi|375150217|ref|YP_005012658.1| signal recognition particle subunit FFH/SRP54 (srp54) [Niastella
koreensis GR20-10]
gi|361064263|gb|AEW03255.1| signal recognition particle subunit FFH/SRP54 (srp54) [Niastella
koreensis GR20-10]
Length = 438
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 290/422 (68%), Gaps = 5/422 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE+A ++KGE +T+ NI ++DIRRAL++ADV+ + + F V ++A+
Sbjct: 1 MFENLTDRLESALKQIKGEGRITELNIAATVKDIRRALVDADVNYKIAKDFTDRVKDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q +VKIV+DELV LMGG SE AK P VIL+AGLQG GKTT SAKL
Sbjct: 61 GEKVLTAVSPGQLMVKIVKDELVDLMGGSESEFN-AKGNPAVILIAGLQGSGKTTFSAKL 119
Query: 204 ANYLKKQGK-SCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK +G+ S MLVA D+YRPAAIDQL +LGEQ+ V VY+ QIA ++EA+
Sbjct: 120 ANFLKTRGRLSPMLVAADIYRPAAIDQLKVLGEQIQVDVYSEPENKNAVQIASNAIKEAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
KN +VVI+DTAGRL ID+AMM E+ +VK +NP E+L VVD+MTGQ+A FN +
Sbjct: 180 SKNKNVVIIDTAGRLAIDEAMMTEVANVKSAVNPNEILFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG +LTKLDGD+RGGAALS+K KPIK V GE+++ L+ FYP+RMA RILGMGD+
Sbjct: 240 DFTGVVLTKLDGDTRGGAALSIKYTVQKPIKFVSSGEKLDTLDVFYPERMAQRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+ VEKAQ+ +E A +++KKI F+F DF +Q + +MG++ ++GMIPG+GK
Sbjct: 300 TTLVEKAQQQFDEEQARKLEKKIRKNQFNFEDFKQQLEQIKKMGNIKDLLGMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ + K +EAMI +MT +ERE P+L+ R++R+A+ SGK +V+ + Q
Sbjct: 360 K-DIDISDDAFKGIEAMINSMTKQEREDPDLINMG--RKQRIAKGSGKGLDEVNAFLKQF 416
Query: 503 FQ 504
Q
Sbjct: 417 EQ 418
>gi|153954026|ref|YP_001394791.1| hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219854640|ref|YP_002471762.1| hypothetical protein CKR_1297 [Clostridium kluyveri NBRC 12016]
gi|146346907|gb|EDK33443.1| Hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219568364|dbj|BAH06348.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 449
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 305/436 (69%), Gaps = 2/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ KL+G+ L++++I + MR+++ ALLEADV+ VVR FV++VSE+ +G
Sbjct: 3 FEGLASKLQETLKKLRGKGKLSEKDIKDAMREVKLALLEADVNYKVVRNFVKSVSEKCLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV +EL LMG S + ++ T+I+L GLQG GKTT+ KLA
Sbjct: 63 EEVLKSLTPAQQVIKIVNEELTSLMGNSESSIEYSPDGLTIIMLVGLQGSGKTTMCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K+ K +LVA D+YRPAAI QL I+G+Q+ +PV++ G +V+ I K + AK
Sbjct: 123 LQLRKKNKKPLLVACDIYRPAAIKQLQIVGKQIDIPVFSMGDKVEAVDICKGAVTYAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++V+I+DTAGRLQID+ +MDELK +K +NP E+LLVVD+MTGQ+A + ++FN ++ I
Sbjct: 183 KLNVIIIDTAGRLQIDEELMDELKQIKENINPQEILLVVDSMTGQDAVNVASSFNEQLNI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G +LTKLDGD+RGGAALS++ ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS
Sbjct: 243 NGVVLTKLDGDTRGGAALSIRAITGKPIKFVGMGEKMNDLEVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKIT 442
+EKAQ+ + +E+A+++ ++++ F+F DFL ++G +S++I M+PG M ++
Sbjct: 303 LIEKAQQSIDEEEAKKLGDRMLNKEFNFEDFLALMAQTKKLGPISKLIEMVPGVNMKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ EK + +EA+I +MT +ER KP +++ S R+KR+A SG Q V++L+
Sbjct: 363 GVDLSRGEKEMVKIEAIINSMTLKERRKPSIVSGSSSRKKRIAAGSGTNIQTVNKLLKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
+++ MK G+ +G
Sbjct: 423 EKIKKTMKQFNGMKKG 438
>gi|146318530|ref|YP_001198242.1| Signal recognition particle GTPase [Streptococcus suis 05ZYH33]
gi|146320726|ref|YP_001200437.1| Signal recognition particle GTPase [Streptococcus suis 98HAH33]
gi|253751657|ref|YP_003024798.1| signal recognition particle protein [Streptococcus suis SC84]
gi|253753559|ref|YP_003026700.1| signal recognition particle protein [Streptococcus suis P1/7]
gi|386577837|ref|YP_006074243.1| Signal recognition particle protein [Streptococcus suis GZ1]
gi|386579891|ref|YP_006076296.1| Signal recognition particle GTPase [Streptococcus suis JS14]
gi|386581850|ref|YP_006078254.1| Signal recognition particle GTPase [Streptococcus suis SS12]
gi|386588081|ref|YP_006084482.1| Signal recognition particle GTPase [Streptococcus suis A7]
gi|145689336|gb|ABP89842.1| Signal recognition particle GTPase [Streptococcus suis 05ZYH33]
gi|145691532|gb|ABP92037.1| Signal recognition particle GTPase [Streptococcus suis 98HAH33]
gi|251815946|emb|CAZ51560.1| signal recognition particle protein [Streptococcus suis SC84]
gi|251819805|emb|CAR45741.1| signal recognition particle protein [Streptococcus suis P1/7]
gi|292558300|gb|ADE31301.1| Signal recognition particle protein [Streptococcus suis GZ1]
gi|319758083|gb|ADV70025.1| Signal recognition particle GTPase [Streptococcus suis JS14]
gi|353733996|gb|AER15006.1| Signal recognition particle GTPase [Streptococcus suis SS12]
gi|354985242|gb|AER44140.1| Signal recognition particle GTPase [Streptococcus suis A7]
Length = 512
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE++ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK++ + +L+A D+YRPAAIDQL LG+Q+ VPV+ G +V +I +QGLE+AK
Sbjct: 123 NKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL+++K P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDQALMTELREIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLA 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV+ ++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVILTKIDGDTRGGAALSVRHITGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASKEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANLKVDEREIARKRAIVSSMTPAERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKTMMQ---GVMSG 433
>gi|296330813|ref|ZP_06873288.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674331|ref|YP_003866003.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151818|gb|EFG92692.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412575|gb|ADM37694.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 446
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/436 (47%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ + MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKDMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVKEELTELMGGEESKIAVAKKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|52080200|ref|YP_078991.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404489088|ref|YP_006713194.1| signal recognition particle protein [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|423682141|ref|ZP_17656980.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
gi|52003411|gb|AAU23353.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52348079|gb|AAU40713.1| signal recognition particle protein Ffh [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|383438915|gb|EID46690.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
Length = 446
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/436 (48%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ +T++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVTEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVKEELTELMGGEESKIAAAKRPPTVIMMVGLQGAGKTTSTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK ++ +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRNPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDKVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL ID+ +MDEL+ VK P E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 DHHDYVLIDTAGRLHIDEELMDELEQVKETAQPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 VTGVILTKLDGDTRGGAALSIRAVTNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V MG + +I M+PG GK+
Sbjct: 303 TLIEKAQANVDEEKAKELEQKMKNMSFTLDDFLEQLGQVRNMGPLEDLIQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK L +EA+I++MT +E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNVKVDEKQLSHIEAIIKSMTGKEKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 EEMKKMMKQMTNMTKG 436
>gi|422876404|ref|ZP_16922874.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
gi|332361212|gb|EGJ39016.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
Length = 524
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLHRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT S KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFSGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|86133270|ref|ZP_01051852.1| signal recognition 54 kDa protein (SRP54) [Polaribacter sp. MED152]
gi|85820133|gb|EAQ41280.1| signal recognition 54 kDa protein (SRP54) [Polaribacter sp. MED152]
Length = 442
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 285/420 (67%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRALL+ADV+ + + F + V +A+
Sbjct: 1 MFNNLSDKLDKALHTLKGHGQITEINVAETLKEVRRALLDADVNFKIAKEFTKKVQTEAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q +VK+V+DEL KLMGGE + S PTVIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTTLNPGQLMVKLVKDELTKLMGGETVGVNLGGS-PTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LV DVYRPAAI+QL ++GEQ+GV VY P +I++ ++ AK
Sbjct: 120 ANYLKTKKSKQVLLVGCDVYRPAAINQLQVVGEQIGVEVYAEVGNNNPVEISQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVI+DTAGRL +D+ MM E+ ++ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGKNVVIIDTAGRLAVDQEMMTEISNIHKAITPQETLFVVDSMTGQDAVNTAKAFNDIL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS+K V KPIK +G GE+ME ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ +E+A ++QKKI F F+DFL Q + + +MGSM ++GMIPG GK
Sbjct: 300 ISLVERAQDQYDEEEARKLQKKIAKNQFGFDDFLNQIQQIKKMGSMKDLVGMIPGAGKAM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP+ER P + S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 360 K-DVDIDDDAFKGIEAIIHSMTPKERSTPSTINAS--RKKRIAKGSGTSIQEVNQLMKQF 416
>gi|402831194|ref|ZP_10879886.1| signal recognition particle protein [Capnocytophaga sp. CM59]
gi|402282891|gb|EJU31418.1| signal recognition particle protein [Capnocytophaga sp. CM59]
Length = 444
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 289/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V +A+
Sbjct: 1 MFDNLSDKLEKALHVLKGHGQITEINVAETLKEVRRALLDADVNYAIAKDFTAKVKAKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIVRDEL +LMGG+ + + + P+VIL++GLQG GKTT S KL
Sbjct: 61 GANVLTTLQPGQLMVKIVRDELTELMGGDATGVNLS-GNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAIDQL I+G+Q+GVPV++ P IA++G+ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDVYRPAAIDQLHIVGDQIGVPVFSEKENNNPVDIAQKGIAYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
++VVI+DTAGRL +D+ MM E+ D+ + ++P E L VVDAMTGQ+A FN +
Sbjct: 180 SNGLNVVIIDTAGRLAVDEQMMKEIADIHKAVSPQETLFVVDAMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK VG GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMDAIDVFYPARMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E A ++QKKI F F+DFL Q + + +MGSM ++GM+PG+GK
Sbjct: 300 VSLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLSQIQQIKKMGSMKDLLGMLPGVGKAV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ + K +EA+I +MTP ER P ++ S R+ R+A+ SG+ +V+QL+ Q
Sbjct: 360 K-DLDISDDAFKYIEAIIYSMTPAERSNPSIINTS--RKNRIAKGSGRNIAEVNQLLKQF 416
>gi|417698687|ref|ZP_12347859.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|419493436|ref|ZP_14033162.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|419506198|ref|ZP_14045859.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|421227494|ref|ZP_15684198.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|421268335|ref|ZP_15719205.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
gi|332200732|gb|EGJ14804.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|379593611|gb|EHZ58423.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|379608112|gb|EHZ72858.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|395595196|gb|EJG55430.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|395869830|gb|EJG80944.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
Length = 523
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MT EERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTSEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|414597552|ref|ZP_11447116.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
gi|421877939|ref|ZP_16309469.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|421878934|ref|ZP_16310410.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|372556275|emb|CCF25589.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|390447237|emb|CCF26530.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|390481673|emb|CCF29177.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
Length = 491
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 291/446 (65%), Gaps = 13/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR+IR ALLEADV+ V++FV V E+A G
Sbjct: 3 FENLTERLSKAMKNLTGRGRVSEEDLRATMREIRLALLEADVNYETVKKFVANVREKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL MG E L + PTVI++AGLQG GKTT AKLA
Sbjct: 63 ADILEGLNPAQQVVKIVNDELTATMGEEAVPLNKSPKIPTVIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +L+A DVYRPAAIDQL ILG +G+PV+ GT++ P I +QGL EA K
Sbjct: 123 YKLKNEQHARPLLIAADVYRPAAIDQLEILGRDLGIPVFQLGTDINPRDIVRQGLAEAHK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD+ + +P E+LL VDAMTGQ AA F+ +
Sbjct: 183 NKNDYVFIDTAGRLQIDETLMQELKDIADIASPDEILLTVDAMTGQNAAETAKGFSAALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK +G+GE+ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFIGQGEKPTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E + +K+ FDFNDF+ Q + V +MG M ++ MIPGM P
Sbjct: 303 TLIEKAQRDFDEEAQAKQLEKMRQNTFDFNDFVAQLKQVQKMGPMEDLLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K +EA++ +MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALANVNIDAKQFSHLEAIVSSMTPAERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-----NLMGV--MEGGS 520
QMR M N G+ M GGS
Sbjct: 420 FDQMRKMMNQATNGNFGGLDKMMGGS 445
>gi|375308192|ref|ZP_09773479.1| signal recognition particle protein [Paenibacillus sp. Aloe-11]
gi|375080523|gb|EHS58744.1| signal recognition particle protein [Paenibacillus sp. Aloe-11]
Length = 458
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 306/447 (68%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L++ L+ ++KL+G+ ++++++ + MR++R ALLEADV+ VV+ F+ V E++VG
Sbjct: 3 FEGLSTRLQNVFSKLRGKGKVSEDDVAQAMREVRLALLEADVNFKVVKDFIAKVKEKSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L A PTVI++ GLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL ILGEQ+ PV+T G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNHRPLLVAGDIYRPAAIKQLQILGEQINAPVFTLGDQTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+EL+ + + P EVLLVVD+MTGQ+A + FN + +
Sbjct: 183 GNDYVIIDTAGRLHVDEELMEELRQIHANVKPDEVLLVVDSMTGQDAVNVAEHFNSSLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ +EPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMG +
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ +K + +EA++ +MT +E++ P+++ S RRKR+A SG + +V++L+ Q
Sbjct: 363 KDIKVDDKQMGRIEAIVHSMTTQEKQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG AL L+
Sbjct: 421 EMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|315613041|ref|ZP_07887952.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
gi|315315151|gb|EFU63192.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
Length = 523
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISETDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GT+V +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTKVPAVEIVRQGLEQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|223932139|ref|ZP_03624143.1| signal recognition particle protein [Streptococcus suis 89/1591]
gi|302023761|ref|ZP_07248972.1| signal recognition particle protein [Streptococcus suis 05HAS68]
gi|330832793|ref|YP_004401618.1| signal recognition particle protein [Streptococcus suis ST3]
gi|386584059|ref|YP_006080462.1| signal recognition particle protein [Streptococcus suis D9]
gi|223899120|gb|EEF65477.1| signal recognition particle protein [Streptococcus suis 89/1591]
gi|329307016|gb|AEB81432.1| signal recognition particle protein [Streptococcus suis ST3]
gi|353736205|gb|AER17214.1| signal recognition particle protein [Streptococcus suis D9]
Length = 524
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE++ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK++ + +L+A D+YRPAAIDQL LG+Q+ VPV+ G +V +I +QGLE+AK
Sbjct: 123 NKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL+++K P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDQALMAELREIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLA 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV+ ++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVILTKIDGDTRGGAALSVRHITGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASKEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANLKVDEREIARKRAIVSSMTPAERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKTMMQ---GVMSG 433
>gi|389856624|ref|YP_006358867.1| signal recognition particle protein [Streptococcus suis ST1]
gi|353740342|gb|AER21349.1| signal recognition particle protein [Streptococcus suis ST1]
Length = 524
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE++ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK++ + +L+A D+YRPAAIDQL LG+Q+ VPV+ G +V +I +QGLE+AK
Sbjct: 123 NKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL+++K P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDQALMAELREIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLA 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV+ ++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVILTKIDGDTRGGAALSVRHITGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASKEYDEKKSLELTEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANLKVDEREIARKRAIVSSMTPAERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKTMMQ---GVMSG 433
>gi|256847356|ref|ZP_05552802.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
gi|256716020|gb|EEU30995.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
Length = 480
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 303/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V +A G
Sbjct: 3 FEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFTVVKDFVKKVRTKATG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL +LMG E L A PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTELMGSEAVALNKAPHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + + +A DVYRPAAI QL + + + VPV+ GT+V P +I ++GL AK
Sbjct: 123 YRLKNEDHARPLFIAADVYRPAAITQLQQVADSIDVPVFEKGTDVDPVEIVREGLAAAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K + P E+LLVVDAMTGQ A A F+ ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEQLMDELANIKELAQPNEILLVVDAMTGQNAVATAQGFDDKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+ME+L+ F+PDRMA RILGMGD++
Sbjct: 243 VTGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMENLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ +E A+E +K+ + FD+NDFL Q ++ MG + ++ M+PGM P
Sbjct: 303 TLIEKAQKNFDEEQAQETMEKMRANEFDYNDFLAQLDQISNMGPLENILKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A+I++MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALKNLNIDPKQFLHIKAIIQSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-----NLMGV--MEGGSLP 522
QMR MK N G+ M GG +P
Sbjct: 420 FGQMRKMMKQVTNGNFSGMQNMMGGQMP 447
>gi|53714504|ref|YP_100496.1| signal recognition protein [Bacteroides fragilis YCH46]
gi|60682525|ref|YP_212669.1| signal recognition particle protein [Bacteroides fragilis NCTC
9343]
gi|265766036|ref|ZP_06094077.1| signal recognition particle protein [Bacteroides sp. 2_1_16]
gi|336411085|ref|ZP_08591554.1| signal recognition particle protein [Bacteroides sp. 2_1_56FAA]
gi|375359320|ref|YP_005112092.1| signal recognition particle protein [Bacteroides fragilis 638R]
gi|383119251|ref|ZP_09939990.1| signal recognition particle protein [Bacteroides sp. 3_2_5]
gi|423250898|ref|ZP_17231913.1| signal recognition particle protein [Bacteroides fragilis
CL03T00C08]
gi|423254224|ref|ZP_17235154.1| signal recognition particle protein [Bacteroides fragilis
CL03T12C07]
gi|423261009|ref|ZP_17241911.1| signal recognition particle protein [Bacteroides fragilis
CL07T00C01]
gi|423267143|ref|ZP_17246125.1| signal recognition particle protein [Bacteroides fragilis
CL07T12C05]
gi|423270998|ref|ZP_17249969.1| signal recognition particle protein [Bacteroides fragilis
CL05T00C42]
gi|423274822|ref|ZP_17253768.1| signal recognition particle protein [Bacteroides fragilis
CL05T12C13]
gi|52217369|dbj|BAD49962.1| putative signal recognition protein [Bacteroides fragilis YCH46]
gi|60493959|emb|CAH08751.1| signal recognition particle protein [Bacteroides fragilis NCTC
9343]
gi|251946470|gb|EES86847.1| signal recognition particle protein [Bacteroides sp. 3_2_5]
gi|263253704|gb|EEZ25169.1| signal recognition particle protein [Bacteroides sp. 2_1_16]
gi|301164001|emb|CBW23557.1| signal recognition particle protein [Bacteroides fragilis 638R]
gi|335943349|gb|EGN05189.1| signal recognition particle protein [Bacteroides sp. 2_1_56FAA]
gi|387774770|gb|EIK36880.1| signal recognition particle protein [Bacteroides fragilis
CL07T00C01]
gi|392651855|gb|EIY45517.1| signal recognition particle protein [Bacteroides fragilis
CL03T00C08]
gi|392654782|gb|EIY48429.1| signal recognition particle protein [Bacteroides fragilis
CL03T12C07]
gi|392697846|gb|EIY91029.1| signal recognition particle protein [Bacteroides fragilis
CL07T12C05]
gi|392698922|gb|EIY92104.1| signal recognition particle protein [Bacteroides fragilis
CL05T00C42]
gi|392704101|gb|EIY97240.1| signal recognition particle protein [Bacteroides fragilis
CL05T12C13]
Length = 439
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 290/428 (67%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E + K +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVE-IDTKGQPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EA+
Sbjct: 120 ARMLKTKKNKRPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEIDSKDPVSIAQNAIKEAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K + P E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQISQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERSNPGILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|402494032|ref|ZP_10840779.1| signal recognition particle protein [Aquimarina agarilytica ZC1]
Length = 442
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 289/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRAL++ADV+ + + F + V E+A+
Sbjct: 1 MFDNLSDKLDKALHILKGHGQITEVNVAETLKEVRRALVDADVNYKIAKEFTKRVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ ++P Q +VK+V+DEL LMGG+ +E + P VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLKSLKPGQLMVKLVKDELTDLMGGD-AEGINLSGTPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +LK K+ K +LVA DVYRPAAIDQL ++G Q+GV VY+ P +AK G+ AK
Sbjct: 120 AQFLKNKKTKKPLLVACDVYRPAAIDQLHVVGGQIGVEVYSDKENNDPVALAKAGVAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVI+DTAGRL +D+ MM+E+ ++ + +NP+E L VVD+MTGQ+A FN +
Sbjct: 180 ANGCNVVIIDTAGRLAVDEEMMNEISNIHKAVNPSETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAALSIKSVVDKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE +E+A ++QKKI F F+DFL Q + + +MG++ ++GMIPGMGK+
Sbjct: 300 VSLVEKAQEQFDEEEARKLQKKIAKNQFGFDDFLSQIQQIKKMGNIKDLMGMIPGMGKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + K +EA+I +MTP ER P+++ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 360 KDV-DVDDDAFKHIEAIIHSMTPAERANPQIINAS--RKKRIGKGSGTSIQQVNQLLKQF 416
>gi|374384305|ref|ZP_09641831.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
gi|373228912|gb|EHP51215.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
Length = 441
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKG+ +T+ N+ E ++++RR+LL+ADV+ + + F V ++A+
Sbjct: 1 MFENLSEKLERSFKILKGQGKITELNVAETLKEVRRSLLDADVNYKIAKDFTNRVKDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ ++ V+P Q +VKIV DEL +LMGG+ + + K P ++L++GLQG GKTT S KL
Sbjct: 61 GMNVLTAVKPGQLMVKIVHDELAELMGGKNVD-IDVKGNPAIVLMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+GK +LVA DVYRPAAI+QL +LGEQ+GVPVYT P IA+ + +AK
Sbjct: 120 ANMLKTKRGKKPLLVACDVYRPAAIEQLRVLGEQIGVPVYTDENSKDPVGIAQAAIRQAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVIVDTAGRL ID+ MM E+ +K+ + P E L VVDAMTGQ+A FN +
Sbjct: 180 AEGKDVVIVDTAGRLAIDEQMMTEITAIKKAIEPNETLFVVDAMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD+
Sbjct: 240 DFDGVILTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE E+A+++QKK+ F+FNDFL Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVEKAQEQFDAEEAKKLQKKLSKNQFNFNDFLGQIQQIKKMGNIKDLASMIPGVGK-A 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP ERE P+++ S RRKR+A SG T Q V++L+ Q
Sbjct: 359 LKNVDIDDDAFKSVEAIIHSMTPMEREMPDIINGS--RRKRIALGSGTTVQDVNRLLKQF 416
Query: 503 FQMRVRMKNLMG 514
+ + MK L G
Sbjct: 417 EESKKMMKMLSG 428
>gi|417093101|ref|ZP_11957490.1| signal recognition particle protein [Streptococcus suis R61]
gi|353531997|gb|EHC01674.1| signal recognition particle protein [Streptococcus suis R61]
Length = 524
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE++ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK++ + +L+A D+YRPAAIDQL LG+Q+ VPV+ G +V +I +QGLE+AK
Sbjct: 123 NKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL+++K P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDQALMAELREIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLA 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV+ ++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVILTKIDGDTRGGAALSVRHITGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASKEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANLKVDEREIARKRAIVSSMTPAERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKTMMQ---GVMSG 433
>gi|284045135|ref|YP_003395475.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
gi|283949356|gb|ADB52100.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
Length = 444
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/445 (47%), Positives = 298/445 (66%), Gaps = 7/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+A + ++ TLT++++ MR+IR ALLEADV+ VV+RF AV E+A+
Sbjct: 1 MFDSLAEKLQATLSDVRSRGTLTEDDVNAAMREIRLALLEADVNFKVVKRFTNAVKERAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I + P QQ+VKIV DEL +LMGGE +EL F+ S PTVIL+AGLQG GKTT +AKL
Sbjct: 61 GSDVIGQLNPGQQVVKIVNDELAELMGGESAELRFSSSPPTVILMAGLQGSGKTTATAKL 120
Query: 204 ANYLKKQGKSCMLVAG-DVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A L++Q +S + VA DVYRPAA++QL+ +G + G VY GT+ P +IAK E A+
Sbjct: 121 ARLLREQNRSSVAVAACDVYRPAAVEQLITVGARAGADVYERGTDADPVEIAKWARERAE 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
++ DV+IVDTAGRL +D+ +M EL ++KRV NPT VLLVVDAMTGQ+A + F +
Sbjct: 181 REGKDVLIVDTAGRLHVDENLMKELAEIKRVTNPTNVLLVVDAMTGQDAVNVAEQFAEVV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +++KLDGD+RGGAALSVK V+GKPI GE+++ E F+PDRMA RILGMGDV
Sbjct: 241 QFDGVVMSKLDGDARGGAALSVKSVTGKPILFASTGEKLDQFERFHPDRMAQRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
++ +EKA+ + A+E+++KI + F +DFL Q R V R+G + ++GM+PG+G
Sbjct: 301 MTLIEKAESQFDETQAKELERKIRKSEFGLDDFLDQLRQVRRLGPLQSLLGMMPGLGGHQ 360
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+R E+ ++A+I +MT EER P+++ S RR R+A+ SG Q V L+ Q
Sbjct: 361 LRNLRVDEREFDRIQAIILSMTAEERRNPDIIKGS--RRIRIARGSGTNVQAVKALIRQF 418
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q M+ LM M+ G +P + L
Sbjct: 419 GQ----MQRLMKSMQSGKMPDIGAL 439
>gi|423278258|ref|ZP_17257172.1| signal recognition particle protein [Bacteroides fragilis HMW 610]
gi|424664217|ref|ZP_18101253.1| signal recognition particle protein [Bacteroides fragilis HMW 616]
gi|404575799|gb|EKA80540.1| signal recognition particle protein [Bacteroides fragilis HMW 616]
gi|404586268|gb|EKA90841.1| signal recognition particle protein [Bacteroides fragilis HMW 610]
Length = 439
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 290/428 (67%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E + K +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVE-IDTKGQPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EA+
Sbjct: 120 ARMLKTKKNKRPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEIDSKDPVAIAQNAIKEAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K + P E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERSNPAILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|419782775|ref|ZP_14308573.1| signal recognition particle protein [Streptococcus oralis SK610]
gi|383182988|gb|EIC75536.1| signal recognition particle protein [Streptococcus oralis SK610]
Length = 523
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGL +A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLAQAQA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLV+DAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|218132452|ref|ZP_03461256.1| hypothetical protein BACPEC_00311 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992562|gb|EEC58564.1| signal recognition particle protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 452
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/439 (46%), Positives = 303/439 (69%), Gaps = 8/439 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + L+G+ L++ ++ +R+++ ALLEADV+ VV++FV++V E+A+G
Sbjct: 3 FDSLSDKLQNIFKNLRGKGRLSESDVKAALREVKMALLEADVNFKVVKQFVKSVEERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVF-AKSRPTVILLAGLQGVGKTTVSAKL 203
++ + P Q ++KIV +E++KLMG E +E+ + S TVI++AGLQG GKTT +AKL
Sbjct: 63 QDVMESLTPGQMVIKIVNEEMIKLMGSETTEIALKSGSEITVIMMAGLQGAGKTTTTAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A K QG+ +LVA DVYRPAA++QL I GE+ GVPV+ GT P IAK G+E AK
Sbjct: 123 AGKFKAQGRKPLLVACDVYRPAAVEQLKINGEKQGVPVFAMGTNQNPVDIAKAGIEHAKS 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++VI+DTAGRL +D+ MM EL+++K + + +LVVD+MTGQ+A + ++F+ +IG
Sbjct: 183 NGNNIVILDTAGRLHVDEDMMTELQNIKSSVGVDQTILVVDSMTGQDAVNVASSFDEKIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALS+K V+GKPI G GE++ DLE F+PDRMA RILGMGDVL
Sbjct: 243 IDGVILTKLDGDTRGGAALSIKAVTGKPILYAGMGEKLSDLEQFHPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---- 439
S +EKA+ + + A EM+KK+ A FDFND+L+ + MG + ++ M+PGMG
Sbjct: 303 SLIEKAEAQIDADKAAEMEKKLRKAEFDFNDYLEYMGQIKNMGGLGSIMNMLPGMGFAGK 362
Query: 440 -KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQL 498
K + EAEK+LK EA+I +M ER +P++L +P R+ R+A+ +G +V+++
Sbjct: 363 IKTDGVDMDEAEKNLKRTEAIILSMNNAERSRPDIL--NPSRKNRIARGAGVDISEVNRV 420
Query: 499 VAQLFQMRVRMKNLMGVME 517
V Q QM+ MK + G+M+
Sbjct: 421 VKQFEQMKKMMKQMPGMMK 439
>gi|422854257|ref|ZP_16900921.1| signal recognition particle protein [Streptococcus sanguinis SK160]
gi|325696493|gb|EGD38383.1| signal recognition particle protein [Streptococcus sanguinis SK160]
Length = 524
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEDNARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|262282312|ref|ZP_06060080.1| signal recognition particle protein [Streptococcus sp. 2_1_36FAA]
gi|262261603|gb|EEY80301.1| signal recognition particle protein [Streptococcus sp. 2_1_36FAA]
Length = 524
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/470 (44%), Positives = 311/470 (66%), Gaps = 26/470 (5%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKEFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKV 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M +I M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAS-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + E+ + A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 362 ALKNFKVDEREIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLM-GVME-------------------GGSLPALSNLEDAL 531
Q + M+ ++ G M GG++P +S L+D +
Sbjct: 420 FNQSKQLMQGVLSGDMSKMMKQMGLNPNNMPKNMPGGGAMPDMSALQDMM 469
>gi|417989876|ref|ZP_12630374.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
gi|410537018|gb|EKQ11600.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
Length = 478
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/445 (46%), Positives = 303/445 (68%), Gaps = 8/445 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLVVDAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KA ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAXXNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G++ L L
Sbjct: 421 NQ----SKQMMNQMSKGNMKGLDGL 441
>gi|227510448|ref|ZP_03940497.1| signal recognition particle protein Ffh [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190100|gb|EEI70167.1| signal recognition particle protein Ffh [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 478
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/446 (48%), Positives = 311/446 (69%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+G+ +++ ++ MR+IR ALLEADV+ VVR FV+ V E+A G
Sbjct: 3 FEGLTERLQNAMKKLRGKGKVSEADLRATMREIRLALLEADVNFQVVRTFVKTVEERAKG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV +EL K MG E L ++ PTVI+++GLQG GKTT KLA
Sbjct: 63 AKVLEGLNPSQQIVKIVDEELTKTMGQEAVPLNKSEKIPTVIMMSGLQGAGKTTTVGKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +L+A DVYRPAAI+QL +G+QV VPV+ GT+V P +IAK+GLE+AK+
Sbjct: 123 LKLKNEQNARPLLIADDVYRPAAIEQLQTVGQQVDVPVFQLGTDVDPVEIAKRGLEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K+ +NP E+LLV+DAMTGQ A A F+ +
Sbjct: 183 DHNDYVIIDTAGRLQIDEKLMDELSNIKKAVNPDEILLVIDAMTGQNAVATAEGFDKTLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ Q+ AEE+ +KI FDFNDFL Q + +MG + ++ MIPGM P
Sbjct: 303 SLIEKTQKEYDQKQAEELSEKIKENTFDFNDFLDQLDQIQKMGPLDEIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K + ++A+I +MT +ER P+++ +P RR+R+++ SG+ Q+V++++ Q
Sbjct: 362 ALQNVNMNPKDMDHLKAIIYSMTEQERTDPDVM--NPSRRRRISRGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M + G++ + N+
Sbjct: 420 FGQ----MKTMMNKVSKGNMSGMENM 441
>gi|290580502|ref|YP_003484894.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449875574|ref|ZP_21782275.1| signal recognition particle protein [Streptococcus mutans S1B]
gi|254997401|dbj|BAH88002.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449253736|gb|EMC51678.1| signal recognition particle protein [Streptococcus mutans S1B]
Length = 516
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|223995257|ref|XP_002287312.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
gi|220976428|gb|EED94755.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
Length = 486
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/410 (50%), Positives = 284/410 (69%), Gaps = 9/410 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF QL++ L G++ +T+ +I ++ +RRALL+ADV+L V + V +++
Sbjct: 1 MFDQLSNALTEVAKNFGGKQRMTENSIQPALKSVRRALLDADVNLDVATALIDGVKRRSL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE----LVFAKS----RPTVILLAGLQGVG 195
G + +GV +QQ +K + DEL+ +MGGE +E A S P VILLAGLQG G
Sbjct: 61 GKEVTKGVTAEQQFIKAMYDELLDMMGGEANESNTMATLAHSSVANEPAVILLAGLQGAG 120
Query: 196 KTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAK 255
KTT + KLA L K+ + +LVA DVYRPAAI+QL ILG+Q+GV V++ G + P+ IAK
Sbjct: 121 KTTAAGKLAFRLPKRNRKVLLVAADVYRPAAIEQLQILGKQIGVEVFSMGVDADPADIAK 180
Query: 256 QGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALV 315
+ +E+AK++ D V+VDTAGR +D+ +M+EL+ VK+ + P E LLVVDAMTGQ AA+L
Sbjct: 181 EAVEKAKREGFDTVVVDTAGRQVVDEELMEELRRVKKTVEPDETLLVVDAMTGQAAASLT 240
Query: 316 TTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGR 375
+F+ +GI+GAILTKLDGDSRGGAA+S++ VSGKPIK VG GE+ DLEPFYPDRMA R
Sbjct: 241 ASFDAAVGISGAILTKLDGDSRGGAAVSIRGVSGKPIKFVGVGEKTNDLEPFYPDRMASR 300
Query: 376 ILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMI 435
ILGMGDV+S VEKA + DA +MQ+K+ A FDF+DF+ Q+R V++MGSM+ V M+
Sbjct: 301 ILGMGDVISLVEKASMEVSDADAAKMQEKMAKAEFDFDDFMTQSRMVSKMGSMAGVAKML 360
Query: 436 PGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRV 484
PGMG I +Q+R+ E+ +K EAMI +M +ER P LL R R+
Sbjct: 361 PGMGNMIDSSQMRQVEERIKRSEAMICSMNKKERANPGLLLTDKSARSRL 410
>gi|422884204|ref|ZP_16930653.1| signal recognition particle protein [Streptococcus sanguinis SK49]
gi|332360637|gb|EGJ38446.1| signal recognition particle protein [Streptococcus sanguinis SK49]
Length = 524
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISENDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKTLANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|422858480|ref|ZP_16905130.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
gi|327460366|gb|EGF06703.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
Length = 524
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISENDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTE+ +I +QGLE+AK
Sbjct: 123 NKLKKEENARLLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEIPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|225018488|ref|ZP_03707680.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
gi|224948689|gb|EEG29898.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
Length = 453
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 295/429 (68%), Gaps = 6/429 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L AA+ +LK + LT+ ++ MR+++ ALLEADV+ VV+ FV VSE++VG
Sbjct: 3 FEGLSEKLSAAFKRLKSKGKLTESDVKLAMREVKLALLEADVNYKVVKDFVAKVSERSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMG E + + F P VI++ GLQG GKTT SAKLA
Sbjct: 63 SDVLESLTPAQQVIKIVNEELCSLMGSEHTRIEFPSKPPCVIMMCGLQGSGKTTHSAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
Y K QG +LVA DVYRPAAI QL ++GE+ G V+ G P +IAK+ L+ AK
Sbjct: 123 KYFKSQGHRPLLVACDVYRPAAIQQLKVVGEKAGASVFEMGN-TDPVEIAKEALKHAKDY 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D+VI+DTAGRL ID+ +M+ELK++K +NP E+LLVVD+MTGQ+A + +FN + I
Sbjct: 182 GNDLVILDTAGRLHIDEQLMNELKNIKAEVNPNEILLVVDSMTGQDAVNVAKSFNETLEI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALSV V+GKP+K G GE+++DLEPF+P+RMA RILGMGDVL+
Sbjct: 242 DGVILTKLDGDTRGGAALSVLAVTGKPVKFAGIGEKLDDLEPFHPERMASRILGMGDVLT 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITP 443
+EKA E + +++A M KK+ FD ND L Q + + +MGS+ ++ +IPG+G KI
Sbjct: 302 LIEKAGENVSEKEAARMAKKLKENKFDMNDLLDQMKQIQKMGSIKSILSIIPGVGEKIKD 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
A + E++ + +EA+I +MT EREKP ++ +P R++R+A SG Q V++L+ Q
Sbjct: 362 ADIDESQ--MTRIEAIITSMTIAEREKPSII--NPSRKRRIAAGSGTQVQDVNRLLKQFE 417
Query: 504 QMRVRMKNL 512
M+ MK L
Sbjct: 418 DMQKMMKQL 426
>gi|116495084|ref|YP_806818.1| Signal recognition particle GTPase [Lactobacillus casei ATCC 334]
gi|116105234|gb|ABJ70376.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus casei ATCC 334]
Length = 478
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 304/445 (68%), Gaps = 12/445 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A++ L+ + +++ +I + MR+IR ALLEADV+ VV+ F++ V +A+G
Sbjct: 3 FEGLSERLQKAFSGLRRKGKVSESDIRDAMREIRLALLEADVNFDVVKTFIKNVRTKALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DELVK MG L A PTVI++AGLQG GKTT KL+
Sbjct: 63 AEVLESLTPSQQIIKIVNDELVKTMGEAAVPLNKAPHIPTVIMMAGLQGAGKTTTVGKLS 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL + +L+A DVYRPAAIDQL +G+Q+ VPV+ GT+V P +I +QGL AK+
Sbjct: 123 KYLMDNDSARPLLIAADVYRPAAIDQLQTIGKQLNVPVFEMGTDVDPVEIVRQGLATAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+ELK++K + +P ++LLV DAMTGQ A + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDEKLMNELKNIKELAHPNDILLVDDAMTGQAAVDVAKGFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ ++KAQ+ ++ A EM +KI +FDFNDFL Q +++MG + ++ MIPGM
Sbjct: 303 TLIDKAQKNYDEKQAMEMAEKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A V+ K + M+A++ +MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q
Sbjct: 363 LANVKMDPKDIAHMKAIVYSMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQF 420
Query: 503 FQMRV--------RMKNLMGVMEGG 519
Q + MK L G+M GG
Sbjct: 421 NQSKQMMNQMSKGNMKGLDGLMGGG 445
>gi|350265910|ref|YP_004877217.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|384175339|ref|YP_005556724.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|449094290|ref|YP_007426781.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
gi|349594563|gb|AEP90750.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349598797|gb|AEP86585.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|449028205|gb|AGE63444.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
Length = 446
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/436 (47%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ + MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKDMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVKEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|184155710|ref|YP_001844050.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
gi|183227054|dbj|BAG27570.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
Length = 484
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 304/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 11 FEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKAAG 70
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL ++MG + L + PTVI++ GLQG GKTT + KLA
Sbjct: 71 AEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGKLA 130
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+LKK+ + + +A DVYRPAAI QL + + VPV+ GT+V P +I +QG+E AK+
Sbjct: 131 KHLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVAKE 190
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K+ D VI+DTAGRLQID+ +M+EL +K + P E+LLVVDAMTGQ A F+ ++
Sbjct: 191 KHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQLD 250
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+M++L+ F+PDRMA RILGMGD++
Sbjct: 251 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGDMM 310
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE QE A + K+ +FDFNDFL Q + +MG + ++ M+PGM P
Sbjct: 311 TLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN-NP 369
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A+I +MTPEERE P+++ +P RR+R+A SG+ +V++++ Q
Sbjct: 370 ALQNINLDPKQFAHIKAIIYSMTPEERENPDMM--NPSRRRRLAAGSGRPIVEVNRMIKQ 427
Query: 502 LFQMRVRMK-----NLMGV--MEGGSLP 522
QMR M+ NL G+ + GG +P
Sbjct: 428 FNQMRKMMRQVTNGNLSGMENLMGGQMP 455
>gi|450159193|ref|ZP_21879300.1| signal recognition particle protein [Streptococcus mutans 66-2A]
gi|449241479|gb|EMC40105.1| signal recognition particle protein [Streptococcus mutans 66-2A]
Length = 516
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/436 (46%), Positives = 299/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ E + A++ +MTP ERE P+LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEDEIARKRAIVSSMTPAERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|194333840|ref|YP_002015700.1| signal recognition particle protein [Prosthecochloris aestuarii DSM
271]
gi|194311658|gb|ACF46053.1| signal recognition particle protein [Prosthecochloris aestuarii DSM
271]
Length = 449
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/452 (48%), Positives = 298/452 (65%), Gaps = 7/452 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LEA + KL G+ T+ + NI MRDI+RALL ADV+ V ++FV+ V E+A+
Sbjct: 1 MFDNLSDKLEATFKKLAGQATINEVNIGIAMRDIKRALLGADVNYKVTKKFVEDVREKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAK 202
G +++ V P Q +VKIV DEL +LMGGE L A ++ P VI++AGLQG GKTT AK
Sbjct: 61 GEQVVKSVSPAQMIVKIVSDELTELMGGENKPLNLATNKLPAVIMVAGLQGSGKTTFCAK 120
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LA LKK GK +LVA DVYRPAAI QL +G+QV VPV++ + + A G++EA+
Sbjct: 121 LAKRLKKNGKHPLLVAADVYRPAAIAQLKTMGDQVDVPVFSIDAQ-DALKAALDGVDEAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRLQ+D+ MM E + +K+ L+P E+L VVDAM GQEA FN +
Sbjct: 180 KIGCDVVIVDTAGRLQVDEGMMAEAESLKKQLSPDEILFVVDAMIGQEAVNTAKVFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS+K V KPIK + GE+++DL+ FYPDRMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDARGGAALSIKHVVDKPIKFMSVGEKVDDLDLFYPDRMAQRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+SFVEKAQE + E MQ ++M FD NDF Q + + +MGS+ ++ M+PG+ K+
Sbjct: 300 VSFVEKAQETLDLEKTRTMQTRLMKNEFDLNDFFDQLQQLKKMGSIQGLVEMVPGLNKMI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
P Q + K +EA+I +MT ER+ PE++ S RR R+A SG Q V+ L+ Q
Sbjct: 360 PKQDLDG-LDFKPIEAIICSMTKAERQAPEIINGS--RRMRIASGSGTKVQDVNMLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGS--LPALSNLEDALK 532
+M+ M ++ + + G +P NLE LK
Sbjct: 417 KEMKKMMSSVTKMTKSGRKIMPQNLNLEKLLK 448
>gi|422860148|ref|ZP_16906792.1| signal recognition particle protein [Streptococcus sanguinis SK330]
gi|327470046|gb|EGF15510.1| signal recognition particle protein [Streptococcus sanguinis SK330]
Length = 524
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKSLANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|408672491|ref|YP_006872239.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
gi|387854115|gb|AFK02212.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
Length = 438
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 296/444 (66%), Gaps = 10/444 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L A+ LKG+ ++ N+ ++++RRAL++ADV+ V + V ++A+
Sbjct: 1 MFENLSDKLNKAFKTLKGQGRISDINVASTVKEVRRALMDADVNYKVAKEVTDRVRDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
++ V P Q VKIV++EL++LMGG+ ++ V K P V+L+AGLQG GKTT S K
Sbjct: 61 DRKVMIAVEPGQLFVKIVQEELMELMGGQ-AQSVNLKGSPAVVLIAGLQGSGKTTFSGKF 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYLKKQG+ +LVA DVYRPAAI QL +LGEQ+GV V+ +IAK L AK
Sbjct: 120 ANYLKKQGRQVLLVACDVYRPAAITQLQVLGEQIGVEVFAEPENKNAVEIAKNALSYAKT 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K +VIVDTAGRL +D+ MM E++++K+ + P+E+L VVD+MTGQ+A TFN +
Sbjct: 180 KGKSIVIVDTAGRLAVDEVMMKEVEEIKKAITPSEILFVVDSMTGQDAVNTAKTFNDRLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGD+RGGAALS+K V KPIK + GE+ME L+ FYPDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDARGGAALSIKAVVNKPIKFISTGEKMEALDIFYPDRMASRILGMGDVI 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +E++ + KK+ FD NDFL Q + +MG++ ++GMIPG+G
Sbjct: 300 SLVERAQQAFDEEESRRLNKKMRENKFDLNDFLTQLEQIKKMGNIKDLMGMIPGVG---- 355
Query: 444 AQVRE---AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+Q+++ + S K +EA+I++MTP+ER KP+++ S R+KR+A SG QQV+ L+
Sbjct: 356 SQIKDIDISNDSFKPIEAIIKSMTPKERSKPDIIDGS--RKKRIAAGSGTDIQQVNNLLK 413
Query: 501 QLFQMRVRMKNLMGVMEGGSLPAL 524
Q QMR MK + + G + A
Sbjct: 414 QFDQMRSMMKKVNQMQASGKMKAF 437
>gi|386586085|ref|YP_006082487.1| signal recognition particle protein [Streptococcus suis D12]
gi|353738231|gb|AER19239.1| signal recognition particle protein [Streptococcus suis D12]
Length = 524
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ +I E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADVALPVVKDFIKKVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SE++ + PT+I++AGLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPTIIMMAGLQGAGKTTFTGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LK++ + +L+A D+YRPAAIDQL LG+Q+ VPV+ G +V +I +QGLE+AK
Sbjct: 123 NKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPVFELGNQVPALEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL+++K P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDQALMAELREIKEFAQPNEILLVVDAMIGQEAANVAREFNDQLA 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTK+DGD+RGGAALSV+ ++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVILTKIDGDTRGGAALSVRHITGQPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASKEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANLKVDEREIARKRAIVSSMTPAERENPDLL--TPSRRRRIANGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKTMMQ---GVMSG 433
>gi|399923725|ref|ZP_10781083.1| signal recognition particle protein [Peptoniphilus rhinitidis 1-13]
Length = 445
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 290/429 (67%), Gaps = 3/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ L G+ LT+++I MR+++ ALLEADV+ VV+ FV+ V E+A+
Sbjct: 2 VFESLSDKLQNTLKNLTGKGKLTEKDIDAAMREVKLALLEADVNFKVVKDFVKTVKERAL 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL LMG +L +K + TVI++ GLQG GKTT S KL
Sbjct: 62 GKEVLESLTPGQQVIKIVNEELTNLMGTNEVKLDLSK-KTTVIMMCGLQGAGKTTTSGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKK GK +LVA DVYRPAAI QL ++G+ V PV+T G ++ P I+K LE AKK
Sbjct: 121 ANKLKKDGKRPLLVACDVYRPAAIKQLQVVGKSVDTPVFTMGDKISPVDISKAALEHAKK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL ID+ +M EL+D+ +NP+EVLLV+DAMTGQ+A + TF+ +
Sbjct: 181 NGNDVVIIDTAGRLHIDEKLMKELQDIHEEINPSEVLLVLDAMTGQDAVNVADTFDDMLK 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+ PIK + GE+M+++E F+PDRMA RILGMGDVL
Sbjct: 241 LTGVILTKLDGDARGGAALSIRSVTDVPIKFIASGEKMDNIEVFHPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + + A+E+++K+ + F F DFL Q + + MG + +IGMIPG+
Sbjct: 301 SLIEKAQNAVDDKKAKELEEKLRKSTFTFEDFLDQMQQMKNMGPLEDIIGMIPGVDNKAL 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ E +EA+I +MT +ER KPE++ S RRKR+A+ SG + V++L+ Q
Sbjct: 361 KNINLPENEFAKVEAIILSMTKKERLKPEIIDSS--RRKRIAKGSGTSPADVNKLIKQFK 418
Query: 504 QMRVRMKNL 512
MR MK
Sbjct: 419 DMRKMMKQF 427
>gi|46579253|ref|YP_010061.1| signal recognition particle protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152638|ref|YP_005701574.1| signal recognition particle protein [Desulfovibrio vulgaris RCH1]
gi|46448667|gb|AAS95320.1| signal recognition particle protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233082|gb|ADP85936.1| signal recognition particle protein [Desulfovibrio vulgaris RCH1]
Length = 508
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/443 (46%), Positives = 299/443 (67%), Gaps = 6/443 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L A+ K G+ L + NI E +R++R ALLEADV+ VV+ F+ V E+ +
Sbjct: 1 MFDSLSDRLTQAFRKFSGQSQLDENNIQEGLREVRLALLEADVNFKVVKDFIDRVKERCL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VK+V DELV+L+GG +EL ++P VI++ GLQG GKTT SAK+
Sbjct: 61 GQDVLKSLTPAQQVVKVVHDELVELLGGGTTELDLRGAQPGVIMMVGLQGSGKTTSSAKI 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+K+ LV DVYRPAAIDQLV L Q+ +P Y + ++KP I + L +AK+
Sbjct: 121 ANLLRKRKMRPYLVPVDVYRPAAIDQLVTLARQLDIPYYQSTPDMKPLDIVRAALADAKE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K V++DTAGRL +D+A+MDEL +K P E+L V DAMTGQ+A + FN ++G
Sbjct: 181 KQCTAVLLDTAGRLHVDEALMDELAALKATFAPQEILFVADAMTGQDAVTVADAFNEKLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS+K V+G +K VG GE++ D+E F+PDR+AGRILGMGD+L
Sbjct: 241 ITGVVLTKMDGDARGGAALSIKSVTGASVKYVGIGEKLSDIEVFHPDRVAGRILGMGDML 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ ++ ++AE + KK A+FD DF Q R + ++GS+ ++ MIPGMG +
Sbjct: 301 TLIEKAQSTIEADEAEALTKKFQRASFDLEDFRTQMRRMKKLGSLEGILKMIPGMGALRD 360
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
Q+ EK + +EA+I +MT +ER P+++ S RR R+A+ SG T Q+V+QL+
Sbjct: 361 KLGQMSVPEKDMARIEAIISSMTMKERRNPDVINGS--RRARIAKGSGTTVQEVNQLLRN 418
Query: 502 LFQMRVRMKNLMGVME--GGSLP 522
QMR MK +M + + GG +P
Sbjct: 419 FEQMREMMKRVMNMGKPGGGRMP 441
>gi|387784255|ref|YP_006070338.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
gi|338745137|emb|CCB95503.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
Length = 520
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 297/437 (67%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE+ +I K GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEIPAVEIVKNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMQELHDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|148985187|ref|ZP_01818426.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|387757611|ref|YP_006064590.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|418232322|ref|ZP_12858909.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|418236782|ref|ZP_12863350.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|419480169|ref|ZP_14019975.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|419499865|ref|ZP_14039559.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|147922632|gb|EDK73750.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|301800200|emb|CBW32808.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|353887049|gb|EHE66829.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|353893014|gb|EHE72762.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|379570740|gb|EHZ35701.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|379599173|gb|EHZ63956.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|429316237|emb|CCP35909.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034156]
gi|429319579|emb|CCP32862.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034183]
gi|429321396|emb|CCP34836.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994039]
gi|429323216|emb|CCP30877.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994038]
Length = 523
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MT EERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTSEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|390454100|ref|ZP_10239628.1| signal recognition (srp) component [Paenibacillus peoriae KCTC
3763]
Length = 458
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 305/447 (68%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L++ L+ ++KL+G+ ++++++ + MR++R ALLEADV+ VV+ F+ V E++VG
Sbjct: 3 FEGLSTRLQNVFSKLRGKGKVSEDDVAQAMREVRLALLEADVNFKVVKDFIAKVKEKSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L A PTVI++ GLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL ILGEQ+ PV+T G + P IAKQGL+ AK
Sbjct: 123 KLLQKQNHRPLLVAGDIYRPAAIKQLQILGEQINAPVFTLGDQTSPVDIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+EL+ + + P EVLLVVD+MTGQ+A + FN + +
Sbjct: 183 GNDYVIIDTAGRLHVDEELMEELRQIHANVKPDEVLLVVDSMTGQDAVNVAEHFNSSLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ +EPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMG +
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ +K + +EA++ +MT +E++ P+++ S RRKR+A SG + +V++L+ Q
Sbjct: 363 KDIKVDDKQMGRIEAIVHSMTTQEKQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG AL L+
Sbjct: 421 EMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|306833449|ref|ZP_07466576.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|336064234|ref|YP_004559093.1| signal recognition particle subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
gi|304424219|gb|EFM27358.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|334282434|dbj|BAK30007.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
Length = 521
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL +++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K + +++A D+YRPAAIDQL LG Q+ VPV+ GT+ +I GL +AK+
Sbjct: 123 NKLIKDENARPLMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVIIDTAGRLQIDEKLMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++ KPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITSKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK++ A++ +MTPEERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 ALKNFKVDEKAVARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|386758321|ref|YP_006231537.1| signal recognition particle protein [Bacillus sp. JS]
gi|384931603|gb|AFI28281.1| signal recognition particle protein [Bacillus sp. JS]
Length = 446
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/436 (47%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ + MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKDMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|291515775|emb|CBK64985.1| signal recognition particle subunit FFH/SRP54 (srp54) [Alistipes
shahii WAL 8301]
Length = 443
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/432 (47%), Positives = 298/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE ++ LKGE +T+ N+ E +++IRRAL++ADV+ V + F V ++A+
Sbjct: 1 MFENLTDKLERSFKILKGEGRITEINVAETLKEIRRALIDADVNYKVAKTFTDEVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ V+P Q + KIVRDEL +LMGG +++ + P VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLKAVKPGQMMTKIVRDELAELMGGTATDIRL-EGTPAVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A+ LK K+G+ +LVAGDVYRPAAIDQL +LG Q+GV VYT P +IA+ G++ A+
Sbjct: 120 ASLLKSKKGRQVLLVAGDVYRPAAIDQLKVLGGQIGVEVYTEEGNRNPVEIAENGIKYAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+KN +VVIVDTAGRL +D+AMM E+ +K + P+E L VVDAMTGQ+A FN +
Sbjct: 180 QKNYNVVIVDTAGRLAVDEAMMQEITAIKAAVKPSETLFVVDAMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KP+K + GE+M+ L+ F+P+RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAAISIRSVVNKPLKFISSGEKMDALQVFHPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +++KK++ F+FNDF+ Q + + +MG++ + M+PGMGK+
Sbjct: 300 VSLVERAQEQFDEEEARKLKKKLVKNQFNFNDFISQIQQIKKMGNLKDLASMLPGMGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + K EA+I +MTP ERE PE++ + RR+R+A+ SG T V++L+ Q
Sbjct: 360 K-NVDIPDDVFKQTEAIISSMTPAEREHPEII--NARRRERIAKGSGTTMADVNRLMKQF 416
Query: 503 FQMRVRMKNLMG 514
R MK + G
Sbjct: 417 DDTRKMMKAVAG 428
>gi|313148460|ref|ZP_07810653.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137227|gb|EFR54587.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 439
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 290/428 (67%), Gaps = 5/428 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL +LMGGE E + K +P VIL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVKPSQLMVKIVHDELTQLMGGETVE-IDTKGQPAVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+ K +LVA DVYRPAAI+QL +L EQ+ VP+Y+ P IA+ ++EA+
Sbjct: 120 ARMLKTKKNKRPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEIDSKDPVAIAQNAIKEAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K D+VIVDTAGRL +D+ MM+E+ +K + P E+L VVD+MTGQ+A FN +
Sbjct: 180 AKGYDLVIVDTAGRLAVDEQMMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+++ ++ F+P RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIGQIKKMGNLKELASMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER P +L S RR R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPEERSNPAILNGS--RRTRIAKGSGTTIQEVNRLLKQF 416
Query: 503 FQMRVRMK 510
Q R MK
Sbjct: 417 DQTRKMMK 424
>gi|425736820|ref|ZP_18855096.1| signal recognition particle protein [Staphylococcus massiliensis
S46]
gi|425483292|gb|EKU50444.1| signal recognition particle protein [Staphylococcus massiliensis
S46]
Length = 457
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/430 (46%), Positives = 307/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+A ++K + +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQATMQRIKSKGKVTEADIKVMMREVRLALLEADVNFKVVKNFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV+DEL +LMGGE S + AK PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQDELTELMGGENSSITMAKKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVA D+YRPAAI+QL +G+Q+ +PVY+ G +VKP QI ++ AK+
Sbjct: 123 LLMRKKYNKKPLLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVDNAIKHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+++D VI+DTAGRL ID+ +M EL+D+K + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 EHLDFVIIDTAGRLHIDEGLMSELEDIKEITKPNEIMLVVDAMTGQDAVNVAESFDNQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGD+L
Sbjct: 243 VTGVTLTKLDGDTRGGAALSIRAVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ+ + QE A++++KK+ +++F +DFL Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQQDVDQEKAKDLEKKMRTSSFTLDDFLVQLDQVKNLGPLDDIMKMIPGMNKVKG 362
Query: 444 A-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ +EK + ++A+I++MT ERE PE + S R+KR+A+ SG++ Q+V++++ Q
Sbjct: 363 LDKMNMSEKQIDHIKAIIQSMTKYEREHPEKINVS--RKKRIAKGSGRSLQEVNRILKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 NDMKKIMKQF 430
>gi|428279192|ref|YP_005560927.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430758979|ref|YP_007209700.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|291484149|dbj|BAI85224.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430023499|gb|AGA24105.1| Signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 446
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/436 (47%), Positives = 318/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ + MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKDMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|125717990|ref|YP_001035123.1| SRP54, signal recognition particle GTPase protein [Streptococcus
sanguinis SK36]
gi|125497907|gb|ABN44573.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus sanguinis SK36]
Length = 524
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|365157114|ref|ZP_09353395.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
gi|363625848|gb|EHL76859.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
Length = 446
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 312/430 (72%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLAERLQNTIQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTV+++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTELMGGEQSQIAVAKRPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IA++ +E+AK+
Sbjct: 123 NLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAQKAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+ +M+ELK ++ + P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDENLMEELKQIQSLTKPEEIFLVVDAMTGQDAVNVAQSFDEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS++ V+GKPIK G GE+M+ LEPF+P+RMA RILGMGDVL
Sbjct: 243 ITGVILTKLDGDTRGGAALSIRSVTGKPIKFAGMGEKMDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+++++KI + +F +DFL Q V MG + ++ MIPGM +I
Sbjct: 303 TLIEKAQASVDEEKAKQLEQKIRTMSFTLDDFLDQLGQVRSMGPLDELLKMIPGMNRIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I +MT EE+E PE++ S RRKR+A+ SG T Q+V++L+ Q
Sbjct: 363 LNNIQIDEKQISHVEAIIRSMTKEEKEHPEIINSS--RRKRIAKGSGTTIQEVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 EEMKKMMKQM 430
>gi|401682905|ref|ZP_10814794.1| signal recognition particle protein [Streptococcus sp. AS14]
gi|422851624|ref|ZP_16898294.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|325694512|gb|EGD36421.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|400183587|gb|EJO17838.1| signal recognition particle protein [Streptococcus sp. AS14]
Length = 524
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|291563269|emb|CBL42085.1| signal recognition particle protein [butyrate-producing bacterium
SS3/4]
Length = 454
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/429 (47%), Positives = 299/429 (69%), Gaps = 4/429 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + L+G+ LT+ ++ +++++ ALLEADVS VV++F+ +V E+A+G
Sbjct: 3 FESLADKLQNVFKNLRGKGRLTEADVKAALKEVKMALLEADVSFKVVKQFISSVQERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAKL 203
++ + P Q ++KIV +ELVKLMG E +E+ ++ TVI++ GLQG GKTT +AKL
Sbjct: 63 QDVLESLTPGQMVIKIVNEELVKLMGSETTEIALKPQNEITVIMMIGLQGAGKTTTTAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A K +G+ +L A DVYRPAAI QL + GE+VGVPV+T G P IAK +E A+K
Sbjct: 123 AGKFKAKGRKPLLAACDVYRPAAIKQLQVNGEKVGVPVFTMGDNQNPVNIAKAAVEHARK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +++V +DTAGRLQID++MMDEL ++K + + +LVVDAMTGQ+A + +FN +IG
Sbjct: 183 EGMNLVFLDTAGRLQIDESMMDELVNIKEAVEIDQTILVVDAMTGQDAVNVAGSFNDKIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+L
Sbjct: 243 VDGVILTKLDGDTRGGAALSIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+ + +E A+EM +K+ A FDFNDFL Q R + +MG M+ ++ M+PGM ++
Sbjct: 303 SLIEKAEFEVSEEKAKEMSQKLRKAEFDFNDFLDQMRQIKKMGGMNSILNMMPGMSQMK- 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V E+S+ +EA+I +MT ER P LL +P R++R+A+ +G +V+++V Q
Sbjct: 362 GNVEIDERSMDKVEAIILSMTKGERANPSLL--NPSRKQRIAKGAGVDIAEVNRIVKQFE 419
Query: 504 QMRVRMKNL 512
Q + MK L
Sbjct: 420 QSKKLMKQL 428
>gi|260890999|ref|ZP_05902262.1| signal recognition particle protein [Leptotrichia hofstadii F0254]
gi|260859026|gb|EEX73526.1| signal recognition particle protein [Leptotrichia hofstadii F0254]
Length = 445
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/427 (48%), Positives = 294/427 (68%), Gaps = 2/427 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L + + K+ G+ LT+ N+ + +R++R ALLEADV+ V + FV + E+A+
Sbjct: 1 MFNNLGDRFKDIFKKVSGQGKLTESNMKDALREVRLALLEADVNYSVAKNFVAKIREKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I GV P QQ VKIV DELV+++GG + A PTV++L+GLQG GKTT S KL
Sbjct: 61 GEQVISGVNPTQQFVKIVNDELVEVLGGSNVSIAKADKNPTVVMLSGLQGAGKTTFSGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +LK +G+ L+ DVYRPAA QL +LGEQV VPV+T +I KQG+E +K
Sbjct: 121 AKHLKSKGEKPFLIGADVYRPAAKKQLKVLGEQVKVPVFTIDESTDALEIVKQGIEASKT 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ VI+DTAGRL ID+ +M EL+D+K NP E+LLVVD MTGQ+A + FN ++
Sbjct: 181 EHATYVIIDTAGRLHIDEQLMSELQDIKDSFNPNEILLVVDGMTGQDAVNVAKEFNEQLD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALSVKEV+GKPIK + GE+++D+ PF+PDR+A RILGMGDV+
Sbjct: 241 ITGVVLTKLDGDTRGGAALSVKEVAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVV 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQE + +++A++M++K FDF DFLKQ + + +MGS++ ++ MIPG+ +
Sbjct: 301 SLVEKAQEAIDEKEAKKMEEKFRKNQFDFEDFLKQFKMIRKMGSIAGIMKMIPGV-DTSM 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ AEK +K +EA+I +MT +ER P+LL R+ R+A+ SG V++L+ Q
Sbjct: 360 IDMGMAEKEMKKVEAIIFSMTVQERRDPKLLKNGS-RKMRIAKGSGVQVNDVNKLIKQFE 418
Query: 504 QMRVRMK 510
QM+ MK
Sbjct: 419 QMKQMMK 425
>gi|422870940|ref|ZP_16917433.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
gi|328946321|gb|EGG40465.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
Length = 524
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|228469419|ref|ZP_04054433.1| signal recognition particle protein [Porphyromonas uenonis 60-3]
gi|228309103|gb|EEK17733.1| signal recognition particle protein [Porphyromonas uenonis 60-3]
Length = 446
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/439 (48%), Positives = 292/439 (66%), Gaps = 9/439 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKG+ +T+ N+ E ++D+RRALL+ADV+ V R F V E+A+
Sbjct: 1 MFENLSERLERSFKILKGQGRITEINVAETLKDVRRALLDADVNYNVARDFTDQVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q +VKIV DEL LMG E V K P +IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTAVNPGQMMVKIVHDELATLMGSEAVS-VNLKGSPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN L+KQ + +LVA DVYRPAAI QL +LGEQ+GVPVY+ P QIA+ + A+
Sbjct: 120 ANMLQKQEQRKPLLVACDVYRPAAIQQLHVLGEQIGVPVYSEPESKDPVQIARNAIAHAQ 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
++ +D VI+DTAGRL +D+ MM+E+ +K + P E L VVD+MTGQ+A F+ +
Sbjct: 180 QEGLDTVIIDTAGRLAVDEEMMNEISSIKEAIRPDETLFVVDSMTGQDAVNTAAEFDKRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGDSRGGAALS++ V KPIK VG GE+ME L+ F+P RMA RILGMGD+
Sbjct: 240 DFDGVILTKLDGDSRGGAALSIRSVVNKPIKFVGTGEKMEALQVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ +E+A+ ++ KI FDFNDFL Q + +MG++ ++ MIPG+GK+
Sbjct: 300 VSLVERAQQQYDEEEAKRLEAKIAKNQFDFNDFLAQIAQIKKMGNLKDLVSMIPGVGKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER KP +L S RRKR+A SG + +V++L+ Q
Sbjct: 360 K-DLDISNDAFKGIEAIIHSMTPEERAKPSILDGS--RRKRIADGSGTSVAEVNRLIQQF 416
Query: 503 FQMRVRMKNLMGVMEGGSL 521
Q+ M+ M+GG L
Sbjct: 417 DQVSKVMRK----MQGGGL 431
>gi|450165643|ref|ZP_21881945.1| signal recognition particle protein [Streptococcus mutans B]
gi|449240476|gb|EMC39151.1| signal recognition particle protein [Streptococcus mutans B]
Length = 516
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GV+ G
Sbjct: 420 FNQAK---KMMQGVISG 433
>gi|422848695|ref|ZP_16895371.1| signal recognition particle protein [Streptococcus sanguinis SK115]
gi|325689716|gb|EGD31720.1| signal recognition particle protein [Streptococcus sanguinis SK115]
Length = 524
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|323351581|ref|ZP_08087235.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
gi|322122067|gb|EFX93793.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
Length = 524
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|329770523|ref|ZP_08261901.1| signal recognition particle protein [Gemella sanguinis M325]
gi|328836272|gb|EGF85941.1| signal recognition particle protein [Gemella sanguinis M325]
Length = 450
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/452 (47%), Positives = 309/452 (68%), Gaps = 19/452 (4%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ KL G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ +SE+AVG
Sbjct: 3 FENLSERLQNTIAKLTGKGKVSESDVKEMMREVRLALLEADVNFKVVKEFVKKISERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV +ELV+L+GG EL + T +++ GLQG GKTT + KLA
Sbjct: 63 TEVMKSLTPAQQIVKIVNEELVELLGGTNVEL-NQGGKITTVMMVGLQGAGKTTTAGKLA 121
Query: 205 -NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
K K +L+A DVYRPAA+ QL LG+Q+ + V+ + P+ I K+GLE AK+
Sbjct: 122 LKAKKTMKKKPLLIAADVYRPAAVQQLKTLGKQLDIEVFFVDKD--PADIVKEGLEFAKE 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VI+DTAGRL ID+ +MDELKD+K V NP E+LLVVDAM GQEA + T+F+ ++
Sbjct: 180 NYYNYVIIDTAGRLHIDELLMDELKDIKSVSNPDEILLVVDAMIGQEAVNIATSFDEQLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS+K ++GKPIKLVG GE+M DLE F+P+RMA RILGMGDVL
Sbjct: 240 ITGLVLTKLDGDTRGGAALSIKSITGKPIKLVGMGEKMNDLELFHPERMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +++A++MQ+KI++ +F F DFL Q V ++GS+ ++GMIPGMGK+
Sbjct: 300 TLIEKAQASIDEDEAKKMQEKILTQSFTFEDFLSQLEQVKKLGSIKDILGMIPGMGKMKN 359
Query: 444 AQVREA-EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ EK +EA+I++MT EER+ P+++ + RRKR+AQ SG+ +V +L+ Q
Sbjct: 360 MNLDAVDEKQFVYIEAIIKSMTIEERQNPDII--NVPRRKRIAQGSGRPISEVHKLIKQF 417
Query: 503 FQMRVRMKNLMGVME------------GGSLP 522
+MR MK G+M GG LP
Sbjct: 418 EEMRKMMKQFGGLMNDKSKRKGLGRIFGGKLP 449
>gi|392331490|ref|ZP_10276105.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
gi|391419169|gb|EIQ81981.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
Length = 522
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/431 (45%), Positives = 301/431 (69%), Gaps = 4/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +EL + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HDIIDTLDPTQQILKIVNEELTGILGAETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQISVPVFEMGTDHSAVEIVRRGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK ++NP ++LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKGLVNPNDILLVVDSMIGQEAANVAEEFNRQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGLVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLNQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ +K + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LSHIKVDDKQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLM 513
Q + M+ +M
Sbjct: 421 NQAKTMMQGIM 431
>gi|227513457|ref|ZP_03943506.1| signal recognition particle protein Ffh [Lactobacillus buchneri
ATCC 11577]
gi|227524600|ref|ZP_03954649.1| signal recognition particle protein Ffh [Lactobacillus hilgardii
ATCC 8290]
gi|227083330|gb|EEI18642.1| signal recognition particle protein Ffh [Lactobacillus buchneri
ATCC 11577]
gi|227088275|gb|EEI23587.1| signal recognition particle protein Ffh [Lactobacillus hilgardii
ATCC 8290]
Length = 478
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/446 (48%), Positives = 311/446 (69%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+G+ +++ ++ MR+IR ALLEADV+ VVR FV+ V E+A G
Sbjct: 3 FEGLTERLQNAMKKLRGKGKVSEADLRATMREIRLALLEADVNFQVVRTFVKTVEERAKG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV +EL K MG E L ++ PTVI+++GLQG GKTT KLA
Sbjct: 63 AKVLEGLNPSQQIVKIVDEELTKTMGQEAVPLNKSEKIPTVIMMSGLQGAGKTTTVGKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +L+A DVYRPAAI+QL +G+QV VPV+ GT+V P +IAK+GLE+AK+
Sbjct: 123 LKLKNEQNARPLLIADDVYRPAAIEQLQTVGQQVDVPVFQLGTDVDPVEIAKRGLEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +MDEL ++K+ +NP E+LLV+DAMTGQ A A F+ +
Sbjct: 183 DHNDYVIIDTAGRLQIDEKLMDELGNIKKAVNPDEILLVIDAMTGQNAVATAEGFDKTLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EK Q+ Q+ AEE+ +KI FDFNDFL Q + +MG + ++ MIPGM P
Sbjct: 303 SLIEKTQKEYDQKQAEELSEKIKENTFDFNDFLDQLDQIQKMGPLDEIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K + ++A+I +MT +ER P+++ +P RR+R+++ SG+ Q+V++++ Q
Sbjct: 362 ALQNVNMNPKDMDHLKAIIYSMTEQERTDPDVM--NPSRRRRISRGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q MK +M + G++ + N+
Sbjct: 420 FGQ----MKTMMNKVSKGNMSGMENM 441
>gi|322373056|ref|ZP_08047592.1| signal recognition particle protein [Streptococcus sp. C150]
gi|321278098|gb|EFX55167.1| signal recognition particle protein [Streptococcus sp. C150]
Length = 520
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 297/437 (67%), Gaps = 7/437 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL ++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTDILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I K GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVKNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMQELHDIKNFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLM-GVME 517
Q + M+++M G ME
Sbjct: 420 FNQAKQMMQSVMSGDME 436
>gi|169824222|ref|YP_001691833.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302380887|ref|ZP_07269349.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|303234951|ref|ZP_07321576.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|417925858|ref|ZP_12569273.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
gi|167831027|dbj|BAG07943.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302311265|gb|EFK93284.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|302494069|gb|EFL53850.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|341590783|gb|EGS34014.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
Length = 446
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/434 (49%), Positives = 313/434 (72%), Gaps = 4/434 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A +KL LT+++I MR+++ ALLEADV+ VV+ F+ V E+A+
Sbjct: 2 IFENLSDKLQNALSKLTNRGKLTEKDIDVAMREVKLALLEADVNYKVVKDFISQVKERAI 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
++ + P QQ++KIV +EL K+MG + +L + +PTVI+L GLQG GKTT + KL
Sbjct: 62 DSSVLESLTPGQQVIKIVNEELTKMMGEKEEKLNVSPMKPTVIMLCGLQGAGKTTHAGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK + KS +LVA D+YRPAAI QL ++G +VGV V+ G ++ P +I+K+ +EEAK+
Sbjct: 122 ALNLKNKNKSVLLVACDIYRPAAIKQLQVVGGKVGVEVFEMG-QINPVEISKKAIEEAKR 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
KN+D VI+DTAGRL ID +MDELK++K+ +NP+++LLVVDAMTGQ+A + FN ++
Sbjct: 181 KNIDYVIIDTAGRLHIDDTLMDELKNIKQEVNPSDILLVVDAMTGQDAVNVAAKFNEDLD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILTKLDGD+RGGAALS+++V+ KPIK +G GE++ DLEPF+PDRMA RILGMGDVL
Sbjct: 241 ITGIILTKLDGDARGGAALSIRQVADKPIKFIGVGEKLGDLEPFHPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ ++ A+E+++KI + +FDFNDFL Q + + +MG M ++ MIPG+
Sbjct: 301 SLIEKAQNQFDEKKAKELEEKIKAQSFDFNDFLDQMQQIKKMGPMQDILAMIPGVDSKML 360
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
QV K +EA+I++MT +ERE P++++ S RRKR+A+ G+ + V++L+ Q
Sbjct: 361 KQVNFDNKEFDKIEAIIKSMTKQERENPDIISIS--RRKRIAKGCGQDQVAVNKLLKQFK 418
Query: 504 QMRVRMKNLMGVME 517
+M+V MKN MG ++
Sbjct: 419 EMKVMMKN-MGALQ 431
>gi|422821249|ref|ZP_16869442.1| signal recognition particle protein [Streptococcus sanguinis SK353]
gi|324991163|gb|EGC23097.1| signal recognition particle protein [Streptococcus sanguinis SK353]
Length = 524
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 AFKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|337750082|ref|YP_004644244.1| hypothetical protein KNP414_05850 [Paenibacillus mucilaginosus
KNP414]
gi|386725707|ref|YP_006192033.1| hypothetical protein B2K_26860 [Paenibacillus mucilaginosus K02]
gi|336301271|gb|AEI44374.1| Ffh [Paenibacillus mucilaginosus KNP414]
gi|384092832|gb|AFH64268.1| Ffh [Paenibacillus mucilaginosus K02]
Length = 457
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/433 (46%), Positives = 299/433 (69%), Gaps = 3/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ ++KL+G+ LT++++ E +R++R ALLEADV+ VV+ F+ V E+A+G
Sbjct: 4 FEGLASRLQNVFSKLRGKGKLTEDDVNEALREVRLALLEADVNFKVVKEFIAKVKERAIG 63
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P +V IV EL +LMGG S+L A PTVI++AGLQG GKTT + KLA
Sbjct: 64 QEVLQSFTPAMVVVDIVNKELTELMGGSQSKLARANKPPTVIMMAGLQGAGKTTSTGKLA 123
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L +Q ++ A D+YRPAAI QL ++GEQ+ VPV++ G +V P +IAKQ L+ AK
Sbjct: 124 KMLLQQNHRPLVAAADIYRPAAIKQLQVIGEQLKVPVFSLGDQVSPVEIAKQALQHAKDH 183
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N D +I+DTAGRL ID+ +M+ELK + + P E+LLVVDAMTGQ+A + F+ ++ +
Sbjct: 184 NNDYLIIDTAGRLHIDENLMEELKQIVEAVTPHEILLVVDAMTGQDAVNVAENFHKQLPL 243
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAA+SVK V+G PIK GE+M+ LEPF+P+RMA RILGMGD+L+
Sbjct: 244 TGVVLTKLDGDTRGGAAISVKAVTGCPIKFAATGEKMDALEPFHPERMASRILGMGDMLT 303
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F+DFL Q V ++G + +++ M+PG GK+
Sbjct: 304 LIEKAQAGIDADKAKEMERKLRTAEFTFDDFLDQMEQVKKLGPLDQILDMLPGAGKMKGM 363
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ ++ ++ + A++++MT EER P+LL SP RRKR+A SG + Q V++ + Q
Sbjct: 364 KDLKVDDRQMQRIAAIVKSMTKEERANPDLL--SPSRRKRLAAGSGNSVQDVNRFIKQFD 421
Query: 504 QMRVRMKNLMGVM 516
MR MK +M
Sbjct: 422 DMRKMMKQFSSMM 434
>gi|302392419|ref|YP_003828239.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
gi|302204496|gb|ADL13174.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
Length = 453
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 297/430 (69%), Gaps = 3/430 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ ++KL+G+ L+++++ +R+++ ALLEADV+ VV+ F+ + E+AV
Sbjct: 2 IFEGLADKLQDTFDKLRGKGKLSEKDVKSALREVKLALLEADVNFKVVKNFISDIEERAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL LMGG S+L A PTVI+L GLQG GKTT KL
Sbjct: 62 GKEVMDSLTPAQQVIKIVNEELTDLMGGTQSKLSIASDPPTVIMLVGLQGAGKTTTVGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L K G+ +LVAGDVYRPAAI QL +LGE++ PV++ G + P IAK G+ A+
Sbjct: 122 AKHLHKNGRRPLLVAGDVYRPAAIKQLQVLGERLDQPVFSMGDKQDPVDIAKAGVSHAES 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL ID+ +M ELKD+K +NP E+LLVVDAMTGQ+A + +F+ +G
Sbjct: 182 NGRDVVIIDTAGRLHIDEELMGELKDIKAAVNPQEILLVVDAMTGQDAVNVAESFDDALG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G LTKLDGD+RGGAALS+++V+G+PIK VG GE+++DLEPF+PDRMA RILGMGD+L
Sbjct: 242 VDGITLTKLDGDARGGAALSIRKVTGRPIKFVGTGEKLDDLEPFHPDRMASRILGMGDML 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+E + E A+E+++K+ F +DFL Q + MG + +++ MIPGMGKI
Sbjct: 302 SLIEKAEENIDAEKAKELEEKLRKEEFTLDDFLDQMSQIRNMGPLDQIMDMIPGMGKIKQ 361
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ E+ L +EA+I +MT EE+ P ++ S RR+R+A SG Q V++L+ Q
Sbjct: 362 LDNLDMGEEHLDQIEAIISSMTTEEKRDPSIINGS--RRRRIANGSGTEVQDVNRLLKQF 419
Query: 503 FQMRVRMKNL 512
Q + MK L
Sbjct: 420 KQAQKMMKQL 429
>gi|422878857|ref|ZP_16925323.1| signal recognition particle protein [Streptococcus sanguinis
SK1059]
gi|422928706|ref|ZP_16961648.1| signal recognition particle protein [Streptococcus sanguinis ATCC
29667]
gi|422931680|ref|ZP_16964611.1| signal recognition particle protein [Streptococcus sanguinis SK340]
gi|332366910|gb|EGJ44651.1| signal recognition particle protein [Streptococcus sanguinis
SK1059]
gi|339616120|gb|EGQ20775.1| signal recognition particle protein [Streptococcus sanguinis ATCC
29667]
gi|339619980|gb|EGQ24555.1| signal recognition particle protein [Streptococcus sanguinis SK340]
Length = 534
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 13 FESLTERLQNVFKNLRRKGKISENDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 72
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 73 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 132
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 133 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 192
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 193 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 252
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 253 VTGIILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 312
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 313 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 371
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 372 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 429
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 430 FNQAKQMMQ---GVLSG 443
>gi|450105269|ref|ZP_21859781.1| signal recognition particle protein [Streptococcus mutans SF14]
gi|449224870|gb|EMC24494.1| signal recognition particle protein [Streptococcus mutans SF14]
Length = 516
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRKNSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTP ERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPAERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|149019283|ref|ZP_01834645.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|418103002|ref|ZP_12740076.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|419475661|ref|ZP_14015501.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|419486818|ref|ZP_14026582.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|421209124|ref|ZP_15666138.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|421225165|ref|ZP_15681904.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|421240816|ref|ZP_15697361.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
gi|147931153|gb|EDK82132.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|353775635|gb|EHD56115.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|379561206|gb|EHZ26227.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|379586527|gb|EHZ51378.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|395573833|gb|EJG34419.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|395589217|gb|EJG49536.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|395607194|gb|EJG67291.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
Length = 523
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 301/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKSLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YR AAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRLAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQLMQ---GVMSG 433
>gi|450175644|ref|ZP_21885302.1| signal recognition particle protein [Streptococcus mutans SM1]
gi|449246445|gb|EMC44749.1| signal recognition particle protein [Streptococcus mutans SM1]
Length = 516
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/436 (46%), Positives = 299/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDSSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|23098986|ref|NP_692452.1| signal recognition particle protein [Oceanobacillus iheyensis
HTE831]
gi|22777214|dbj|BAC13487.1| signal recognition particle [Oceanobacillus iheyensis HTE831]
Length = 448
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/430 (46%), Positives = 306/430 (71%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L++ K+ G+ ++++++ E R++R ALLEADV+ VV++ + + E+A+G
Sbjct: 3 FEGLADRLQSTIKKITGKGKVSEQDVKEMTREVRLALLEADVNFKVVKQLITKIKERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVMESLTPGQQVIKVVKEELTQLMGGEQSKIAVADRSPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N+L KK ++ +LVA DVYRPAAI QL LG Q+ +PV++ GTE P IA Q +E AK+
Sbjct: 123 NHLRKKHNRNPLLVACDVYRPAAIKQLETLGTQLDMPVFSMGTEANPVDIAHQAIEHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL +D+ +MDEL+ +K + P E+ LVVD+MTGQ+A + +FN ++
Sbjct: 183 EHRDYVIIDTAGRLHVDENLMDELQSIKNDVKPDEIFLVVDSMTGQDAVNVAESFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS+K V+ KPIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIKSVTDKPIKFAGMGEKLDQLEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + ++ A+E+++K+ + +F F+DFL+Q V +MG + ++ MIPG GK+
Sbjct: 303 SLIEKAQTNVDEKQAKELEEKMRTMSFTFDDFLEQMGQVKQMGPLDELMDMIPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + EK L +EA+I++MT +ER++P ++ S RRKR+A+ SG + QV++L+ Q
Sbjct: 363 LKNAQFDEKQLGQVEAIIQSMTKKERQEPSIINGS--RRKRIAKGSGTSVAQVNRLLKQF 420
Query: 503 FQMRVRMKNL 512
+M+ MK +
Sbjct: 421 NEMKKMMKQM 430
>gi|343525152|ref|ZP_08762108.1| signal recognition particle protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343397024|gb|EGV09560.1| signal recognition particle protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 524
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 302/439 (68%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRMALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEAARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKSVMQ---GVMSG 433
>gi|421452536|ref|ZP_15901897.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
gi|400182967|gb|EJO17229.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
Length = 520
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 295/437 (67%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL ++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTDILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I K GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVKNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMQELHDIKNFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|419707043|ref|ZP_14234549.1| Signal recognition particle protein [Streptococcus salivarius PS4]
gi|383283283|gb|EIC81241.1| Signal recognition particle protein [Streptococcus salivarius PS4]
Length = 520
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 297/437 (67%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I K GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPALEIVKNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMQELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|220905067|ref|YP_002480379.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869366|gb|ACL49701.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 512
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 288/427 (67%), Gaps = 6/427 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L + G LT+EN+ +R++R ALLEADV+ VV+ FV+ V E+ +
Sbjct: 1 MFESLSDRLSGVFRSFGGRGQLTEENVQAGLREVRLALLEADVNFKVVKDFVENVREKCL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++GV P QQ+VKIV DELV L+GGE + L P VI+L GLQG GKTT + K+
Sbjct: 61 GQEVLKGVSPAQQVVKIVHDELVGLLGGETAALDLQGREPAVIMLVGLQGSGKTTSAGKI 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQ LV DVYRPAAIDQL +L +Q+ +P Y + ++ P IAK LEEA++
Sbjct: 121 ANILRKQKMRPYLVPADVYRPAAIDQLTVLAKQLDMPCYPSTVDMDPVDIAKAALEEARR 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ V+++DTAGRL +D+ +M EL+ +K + P E+L V DAMTGQ+A + +FN +G
Sbjct: 181 EQATVLLLDTAGRLHVDEPLMQELEAIKAAVQPQEILFVADAMTGQDAVTVAESFNERLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTK+DGD+RGGAALS++ V+G P+K VG GE++ ++E F+PDR+AGRILGMGDVL
Sbjct: 241 VTGVVLTKMDGDARGGAALSIRAVTGAPVKFVGMGEKLSEMEVFHPDRIAGRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---- 439
+ VEKAQ + E+AEE+ +K+ A+FD DF Q R + ++GS+ ++ MIPG+G
Sbjct: 301 TLVEKAQGAINAEEAEELARKMKKASFDLEDFRTQMRRIKKLGSLESILKMIPGLGGLRD 360
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
K+ A EK + EA+I +MT ER P+LL S RR R+A+ +G T QV+QLV
Sbjct: 361 KLAEASGAMPEKEMARTEAIINSMTMAERRNPDLLNGS--RRARIAKGAGVTVAQVNQLV 418
Query: 500 AQLFQMR 506
Q QMR
Sbjct: 419 RQFEQMR 425
>gi|400290248|ref|ZP_10792275.1| signal recognition particle protein [Streptococcus ratti FA-1 = DSM
20564]
gi|399921039|gb|EJN93856.1| signal recognition particle protein [Streptococcus ratti FA-1 = DSM
20564]
Length = 515
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 298/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKDFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E SEL + PTVI++AGLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVDEELTAILGSETSELEKSPKIPTVIMMAGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I + GL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFEMGTEHTAVEIVRAGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMAELRDVKALAQPDEILLVVDSMIGQEAANVAREFNNQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS+++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGLVLTKIDGDTRGGAALSIRQITGKPIKFTGTGEKISDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENTFDFNDFIDQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E+ + A++ +MTP ERE PELL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDERDIARKRAIVSSMTPAERENPELL--TPSRRRRIAAGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GV+ G
Sbjct: 420 FNQAK---KMMQGVLSG 433
>gi|357636864|ref|ZP_09134739.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
gi|357585318|gb|EHJ52521.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
Length = 517
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/432 (46%), Positives = 294/432 (68%), Gaps = 6/432 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V +A+G
Sbjct: 3 FENLTERLQNVFKNIRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKQVRSRAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ L K + ML+A D+YRPAAIDQL LGEQ+ VPV+ GTE +I QGL +A++
Sbjct: 123 HKLIKDENARPMLIAADIYRPAAIDQLKTLGEQINVPVFDMGTEHSAVEIVSQGLAQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMAELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNKQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV++++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVRQITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ E+ +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKTAELAEKMRENTFDFNDFVDQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTPEERE PELL +P RR+R+A SG T V++ +
Sbjct: 362 ALANIKVDEQEIARKRAIVSSMTPEERENPELL--NPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLM 513
Q + M+ M
Sbjct: 420 FNQAKQMMQGAM 431
>gi|449968858|ref|ZP_21812871.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|450028539|ref|ZP_21832245.1| signal recognition particle protein [Streptococcus mutans G123]
gi|450056695|ref|ZP_21842180.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|450066939|ref|ZP_21846271.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|450092298|ref|ZP_21855923.1| signal recognition particle protein [Streptococcus mutans W6]
gi|450147551|ref|ZP_21875136.1| signal recognition particle protein [Streptococcus mutans 14D]
gi|449174709|gb|EMB77184.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|449195624|gb|EMB96938.1| signal recognition particle protein [Streptococcus mutans G123]
gi|449206440|gb|EMC07143.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|449208373|gb|EMC08968.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|449218645|gb|EMC18650.1| signal recognition particle protein [Streptococcus mutans W6]
gi|449236954|gb|EMC35853.1| signal recognition particle protein [Streptococcus mutans 14D]
Length = 516
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ G E +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGIEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 ALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 420 FNQAK---KMMQGVMSG 433
>gi|422862537|ref|ZP_16909169.1| signal recognition particle protein [Streptococcus sanguinis SK408]
gi|327474237|gb|EGF19644.1| signal recognition particle protein [Streptococcus sanguinis SK408]
Length = 524
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + + + ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKIAESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|450124877|ref|ZP_21867296.1| signal recognition particle protein [Streptococcus mutans U2A]
gi|449233422|gb|EMC32498.1| signal recognition particle protein [Streptococcus mutans U2A]
Length = 516
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/436 (46%), Positives = 299/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG
Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLDSSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I QGL +AK+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MG M ++ MIPGM +
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSA 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 363 LSNVKVDEDEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + K + GVM G
Sbjct: 421 NQAK---KMMQGVMSG 433
>gi|193212765|ref|YP_001998718.1| signal recognition particle protein [Chlorobaculum parvum NCIB
8327]
gi|193086242|gb|ACF11518.1| signal recognition particle protein [Chlorobaculum parvum NCIB
8327]
Length = 449
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/445 (49%), Positives = 295/445 (66%), Gaps = 5/445 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE + KL G+ T+ + NI MRDI+RALL ADV+ V ++ V+ + E+++
Sbjct: 1 MFDNLSDKLELTFKKLAGQATINEVNIGIAMRDIKRALLSADVNYKVAKKLVEDIREKSL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAK 202
G +I+ V P Q +VKIV DEL ++MGGE L K P ++++AGLQG GKTT AK
Sbjct: 61 GEEVIKSVSPAQMIVKIVNDELAEIMGGENQPLNLPPKKMPAIVMVAGLQGSGKTTFCAK 120
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LA LKK GK+ MLVA DVYRPAAI+QL LGEQ+ VPVY+ E + A GLE AK
Sbjct: 121 LAKRLKKNGKNPMLVAADVYRPAAIEQLKTLGEQIDVPVYSV-EEQDAMKAALGGLEAAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DV+IVDTAGRLQID+AMM E + +K L+P E+L VVD+M GQEA FN +
Sbjct: 180 NGAKDVLIVDTAGRLQIDEAMMAEAEALKNKLSPDELLFVVDSMMGQEAVNTAKAFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGDSRGGAALS+++V KPIK + GE+++DL+ FYPDRMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDSRGGAALSIRQVVEKPIKFMSVGEKVDDLDLFYPDRMAQRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+SFVEKAQE + E +MQ K+M FD DF Q + + +MGS+ +I M+PG+ K+
Sbjct: 300 VSFVEKAQETLDLEKTMQMQSKLMKNEFDLEDFFDQLQQLKKMGSIQGLIEMVPGLNKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
P Q E + K +EAMI +MT EER+ PE++ S RRKR+A SG Q+V+ L+ Q
Sbjct: 360 PKQDLE-NINFKPIEAMISSMTKEERKSPEIINGS--RRKRIALGSGTRVQEVNMLLKQF 416
Query: 503 FQMRVRMKNLMGVMEGGSLPALSNL 527
+M+ M+++ + + G NL
Sbjct: 417 TEMKKMMRSVNRLTKSGRKITTENL 441
>gi|379722928|ref|YP_005315059.1| hypothetical protein PM3016_5192 [Paenibacillus mucilaginosus 3016]
gi|378571600|gb|AFC31910.1| Ffh [Paenibacillus mucilaginosus 3016]
Length = 470
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/433 (46%), Positives = 299/433 (69%), Gaps = 3/433 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ ++KL+G+ LT++++ E +R++R ALLEADV+ VV+ F+ V E+A+G
Sbjct: 4 FEGLASRLQNVFSKLRGKGKLTEDDVNEALREVRLALLEADVNFKVVKEFIAKVKERAIG 63
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ P +V IV EL +LMGG S+L A PTVI++AGLQG GKTT + KLA
Sbjct: 64 QEVLQSFTPAMVVVDIVNKELTELMGGSQSKLARANKPPTVIMMAGLQGAGKTTSTGKLA 123
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L +Q ++ A D+YRPAAI QL ++GEQ+ VPV++ G +V P +IAKQ L+ AK
Sbjct: 124 KMLLQQNHRPLVAAADIYRPAAIKQLQVIGEQLKVPVFSLGDQVSPVEIAKQALQHAKDH 183
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N D +I+DTAGRL ID+ +M+ELK + + P E+LLVVDAMTGQ+A + F+ ++ +
Sbjct: 184 NNDYLIIDTAGRLHIDENLMEELKQIVEAVTPHEILLVVDAMTGQDAVNVAENFHKQLPL 243
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAA+SVK V+G PIK GE+M+ LEPF+P+RMA RILGMGD+L+
Sbjct: 244 TGVVLTKLDGDTRGGAAISVKAVTGCPIKFAATGEKMDALEPFHPERMASRILGMGDMLT 303
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F+DFL Q V ++G + +++ M+PG GK+
Sbjct: 304 LIEKAQAGIDADKAKEMERKLRTAEFTFDDFLDQMEQVKKLGPLDQILDMLPGAGKMKGM 363
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ ++ ++ + A++++MT EER P+LL SP RRKR+A SG + Q V++ + Q
Sbjct: 364 KDLKVDDRQMQRIAAIVKSMTKEERANPDLL--SPSRRKRLAAGSGNSVQDVNRFIKQFD 421
Query: 504 QMRVRMKNLMGVM 516
MR MK +M
Sbjct: 422 DMRKMMKQFSSMM 434
>gi|293374741|ref|ZP_06621049.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325837601|ref|ZP_08166448.1| signal recognition particle protein [Turicibacter sp. HGF1]
gi|292646655|gb|EFF64657.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325490903|gb|EGC93202.1| signal recognition particle protein [Turicibacter sp. HGF1]
Length = 475
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/432 (44%), Positives = 307/432 (71%), Gaps = 10/432 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L++A + + LT++++ MR++R ALLEADV++ VVR F+ V E+AVG
Sbjct: 3 FETLSERLQSALKSVTRKGKLTEKDVDVMMREVRLALLEADVNIKVVREFINEVKEKAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV +EL KLMG +EL F ++P V ++ GLQG GKTT + K++
Sbjct: 63 EAVLKSLTPGQQVIKIVNEELTKLMGDSAAELNFGHAKPAVFMMVGLQGAGKTTHTGKIS 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+YL KK+ K+ +LVA DVYRPAA+DQL +G+Q+ +PVY GT + P IAK+ + A++
Sbjct: 123 SYLRKKEKKNPLLVACDVYRPAAVDQLKTIGKQLNIPVYEKGTSMNPVDIAKEAMTYARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRL ID+ +MDELK++K ++NP E+LLVVDAMTGQ+A + +F+ ++
Sbjct: 183 NGHDLVIIDTAGRLHIDEQLMDELKNIKELVNPQEILLVVDAMTGQDAVNVAQSFHDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++++ PIK +G GE+++ LE F+P+RMA RILGMGDV+
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRKITNVPIKFIGLGEKLDTLEVFHPERMASRILGMGDVM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +E+AQE +E++ ++ K+M+A +DFNDFLKQ + + ++G+ ++ MIPG+G
Sbjct: 303 TLIERAQENFDEEESMKLADKMMNATYDFNDFLKQMKQMKKLGAFEDILKMIPGVGN--- 359
Query: 444 AQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q+++ K + +EA+I +MT +ER+ P+L+ S R++R+A+ G +V++++
Sbjct: 360 -QLKDINIDPKQMARVEAIIYSMTEQERKNPDLINAS--RKQRIAKGCGCDIAEVNRMIK 416
Query: 501 QLFQMRVRMKNL 512
Q MR MK
Sbjct: 417 QFTDMRKMMKKF 428
>gi|423070367|ref|ZP_17059143.1| signal recognition particle protein [Streptococcus intermedius
F0413]
gi|355365728|gb|EHG13448.1| signal recognition particle protein [Streptococcus intermedius
F0413]
Length = 524
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 302/439 (68%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRMALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEAARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNNQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKSVMQ---GVMSG 433
>gi|386820840|ref|ZP_10108056.1| signal recognition particle protein [Joostella marina DSM 19592]
gi|386425946|gb|EIJ39776.1| signal recognition particle protein [Joostella marina DSM 19592]
Length = 442
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 287/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ E ++++RRALL+ADV+ + F V E+A+
Sbjct: 1 MFDNLSDKLDKAFHVLKGHGQITEVNVAETLKEVRRALLDADVNFKTAKEFTNTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL++LMGGE + + + S P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLTTLKPGQLMVKLVKDELIELMGGEAAGVDLSGS-PSVILMAGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSC-MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK + +LVA DVYRPAAIDQL ++G+Q+GV V++ P IAK G+E AK
Sbjct: 120 ANFLKTKKTKKPLLVACDVYRPAAIDQLHVVGDQIGVEVFSDKGNSDPVAIAKAGIEHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM+E+ ++ + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGHNVVIVDTAGRLAVDEEMMNEISNIHTAITPNETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 DFNGVILTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++ KKI F F+DFL Q + + +MGSM ++GMIPG GK
Sbjct: 300 VSLVERAQEQYDEEEARKLHKKIAKNQFGFDDFLSQIQQIKKMGSMKDLLGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P LL S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 360 KGMDID-DDAFKGVEAIIHSMTPSERSNPSLLNGS--RKKRIAKGSGTSIQEVNQLLKQF 416
>gi|422882278|ref|ZP_16928734.1| signal recognition particle protein [Streptococcus sanguinis SK355]
gi|332360439|gb|EGJ38250.1| signal recognition particle protein [Streptococcus sanguinis SK355]
Length = 524
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGL++AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLDQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|399026965|ref|ZP_10728603.1| signal recognition particle protein [Flavobacterium sp. CF136]
gi|398075729|gb|EJL66835.1| signal recognition particle protein [Flavobacterium sp. CF136]
Length = 450
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 290/421 (68%), Gaps = 7/421 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ + ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTTKVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q LVK+V+DEL +LMGG+V+ + + P++IL++GLQG GKTT S KL
Sbjct: 61 GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGINLS-GNPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA D+YRPAAI+QL ++G+Q+GV VY+ P +IA+ ++ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVEIAQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +DK MMDE+ V + + P E L VVDAMTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAVDKEMMDEIARVHKAIQPQETLFVVDAMTGQDAVNTAKAFNDIL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK VG GE+ME ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMEAIDVFYPDRMAERILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFL Q + V +MG+M ++GMIPG K
Sbjct: 300 VSLVERAQEQFDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK-RVAQDSGKTEQQVSQLVAQ 501
V + + K +EA+I +MTP ER KP ++ V+RK R+A+ SG +QV+QL+ Q
Sbjct: 360 K-DVEIEDDAFKHIEAIIHSMTPIERSKPAII---DVKRKARIAKGSGTKVEQVNQLMKQ 415
Query: 502 L 502
Sbjct: 416 F 416
>gi|341821055|emb|CCC57389.1| signal recognition particle protein Ffh [Weissella thailandensis
fsh4-2]
Length = 485
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/438 (48%), Positives = 293/438 (66%), Gaps = 9/438 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A + L+ + +T ++ E MR+IR ALLEADV+ VV+ FV++V E+A G
Sbjct: 3 FEGLTDRLQKALSGLRRKGKVTDADLRETMREIRLALLEADVNFKVVKDFVRSVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+V IV DEL +MG EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 AKVLDGLNPAQQIVSIVNDELTAMMGESAVELNKSPKIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +++A DVYRPAAIDQL LGEQ+ VPV+ GT+V P I K G+E+A +
Sbjct: 123 LKLKNEQNARPLMIAADVYRPAAIDQLKSLGEQIDVPVFDMGTDVNPRDIVKAGMEKAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +D AGRLQID+ +M EL DVK + P E++LVVDAMTGQ A FN +
Sbjct: 183 LKSDYVFIDAAGRLQIDEELMQELADVKDIAQPDEIMLVVDAMTGQNAVETAEGFNNRLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK VG+GE+M DL+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFVGQGEKMTDLDIFYPDRMASRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++ A E +K+ S FDFNDF+ Q + MGSM ++ MIPGM P
Sbjct: 303 TLIEKAQKDYDEKQANETMEKMKSNTFDFNDFIDQMDQLQNMGSMEDIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K + + A++ +MTPEERE P++L +P R++R+A +G+ +V+++V Q
Sbjct: 362 ALKNAKIDPKDMAHIRAIVMSMTPEERENPDVL--NPSRKRRLAAGAGRPVVEVNRMVKQ 419
Query: 502 LFQMRVRMKNLMGVMEGG 519
QM+ K + GVM G
Sbjct: 420 FNQMK---KMMSGVMNGN 434
>gi|227515698|ref|ZP_03945747.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
gi|227085946|gb|EEI21258.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
Length = 476
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 303/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 3 FEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKAAG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL ++MG + L + PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ + + +A DVYRPAAI QL + + VPV+ GT+V P +I +QG+E AK+
Sbjct: 123 KRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K+ D VI+DTAGRLQID+ +M+EL +K + P E+LLVVDAMTGQ A F+ ++
Sbjct: 183 KHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+M++L+ F+PDRMA RILGMGD++
Sbjct: 243 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGDMM 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE QE A + K+ +FDFNDFL Q + +MG + ++ M+PGM P
Sbjct: 303 TLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A+I +MTPEERE P+++ +P RR+R+A SG+ +V++++ Q
Sbjct: 362 ALQNINLDPKQFAHIKAIIYSMTPEERENPDMM--NPSRRRRLAAGSGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-----NLMGV--MEGGSLP 522
QMR M+ NL G+ + GG +P
Sbjct: 420 FNQMRKMMRQVTNGNLSGMENLMGGQMP 447
>gi|228476757|ref|ZP_04061423.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|340398712|ref|YP_004727737.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|387761204|ref|YP_006068181.1| signal recognition particle protein [Streptococcus salivarius 57.I]
gi|228251628|gb|EEK10729.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|338742705|emb|CCB93210.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|339291971|gb|AEJ53318.1| signal recognition particle protein [Streptococcus salivarius 57.I]
Length = 520
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 296/437 (67%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I K GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVKNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMQELHDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|170017639|ref|YP_001728558.1| Signal recognition particle protein [Leuconostoc citreum KM20]
gi|169804496|gb|ACA83114.1| Signal recognition particle protein [Leuconostoc citreum KM20]
Length = 491
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 290/446 (65%), Gaps = 13/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR+IR ALLEADV+ V++FV V E+A G
Sbjct: 3 FENLTERLSKAMKNLTGRGRVSEEDLRATMREIRLALLEADVNYETVKKFVANVREKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL MG E L + PTVI++AGLQG GKTT AKLA
Sbjct: 63 ADILEGLNPAQQVVKIVNDELTATMGEEAVPLNKSPKIPTVIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK +Q +L+A DVYRPAAIDQL ILG +G+PV+ GT++ P I +QGL EA K
Sbjct: 123 YKLKSEQHARPLLIAADVYRPAAIDQLEILGRDLGIPVFQLGTDINPRDIVRQGLAEAHK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD+ + +P E+LL VDAMTGQ AA F+ +
Sbjct: 183 NKNDYVFIDTAGRLQIDETLMQELKDIADIASPDEILLTVDAMTGQNAAETAKGFSAALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLD D+RGGAALS+++V+GKPIK +G+GE+ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDADTRGGAALSIRDVTGKPIKFIGQGEKPTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E + +K+ FDFNDF+ Q + V +MG M ++ MIPGM P
Sbjct: 303 TLIEKAQRDFDEEAQAKQLEKMRQNTFDFNDFVAQLKQVQKMGPMEDLLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K +EA++ +MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALANVNIDAKQFSHLEAIVSSMTPAERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-----NLMGV--MEGGS 520
QMR M N G+ M GGS
Sbjct: 420 FDQMRKMMNQATNGNFGGLDKMMGGS 445
>gi|308068626|ref|YP_003870231.1| signal recognition particle protein [Paenibacillus polymyxa E681]
gi|305857905|gb|ADM69693.1| Signal recognition particle protein [Paenibacillus polymyxa E681]
Length = 458
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/447 (44%), Positives = 306/447 (68%), Gaps = 5/447 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L++ L+ ++KL+G+ ++++++ + MR++R ALLEADV+ VV+ F+ V E++VG
Sbjct: 3 FEGLSTRLQNVFSKLRGKGKVSEDDVAQAMREVRLALLEADVNFKVVKDFIAKVKEKSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ P ++ IV EL +LMGG ++L A PTVI++ GLQG GKTT S KLA
Sbjct: 63 KEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+KQ +LVAGD+YRPAAI QL +LGEQ+ PV+T G + P +IAKQGL+ AK
Sbjct: 123 KLLQKQNHRPLLVAGDIYRPAAIKQLQVLGEQINTPVFTLGDQTSPVEIAKQGLQHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D VI+DTAGRL +D+ +M+EL+ + + P EVLLVVD+MTGQ+A + FN + +
Sbjct: 183 GNDYVIIDTAGRLHVDEELMEELRQIHTNVKPDEVLLVVDSMTGQDAVNVAEHFNSSLEL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALSVK V+G PIK GE+++ +EPF+P+RMA RILGMGD+LS
Sbjct: 243 TGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ + + A+EM++K+ +A F F DFL+Q V ++G + +++ MIPGMG +
Sbjct: 303 LIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQM 362
Query: 445 Q-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ ++ +K + +EA++ +MT +E++ P+++ S RRKR++ SG + +V++L+ Q
Sbjct: 363 KDIKVDDKQMGRIEAIVHSMTTQEKQNPDMINHS--RRKRISVGSGTSLAEVNRLIKQFD 420
Query: 504 QMRVRMKNLMGVM--EGGSLPALSNLE 528
+MR MK +M +GG A+ L+
Sbjct: 421 EMRRMMKQFSDMMGPKGGKNKAMKQLK 447
>gi|18310695|ref|NP_562629.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110800465|ref|YP_696400.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110802935|ref|YP_699000.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|168207936|ref|ZP_02633941.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|168210654|ref|ZP_02636279.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|168214190|ref|ZP_02639815.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|182625861|ref|ZP_02953627.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|422874634|ref|ZP_16921119.1| signal recognition particle protein [Clostridium perfringens F262]
gi|18145376|dbj|BAB81419.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110675112|gb|ABG84099.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110683436|gb|ABG86806.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|170660749|gb|EDT13432.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|170711297|gb|EDT23479.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|170714291|gb|EDT26473.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|177908895|gb|EDT71387.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|380304275|gb|EIA16564.1| signal recognition particle protein [Clostridium perfringens F262]
Length = 452
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/417 (47%), Positives = 304/417 (72%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ KLKG+ LT+++I E MR+++ ALLEADV+ VV++F+ V ++ VG
Sbjct: 3 FDGLASKLQDTLKKLKGKGKLTEKDIKEAMREVKLALLEADVNFKVVKKFISNVKDKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL LMG S+L ++ + PTV +L GLQG GKTT++ KLA
Sbjct: 63 EEVLNSLTPGQQVIKIVNDELTTLMGETESKLKYSDNGPTVFMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA D+YRPAAI QL ++G+Q+ +PV++ G +VK IAK +E AK
Sbjct: 123 LHLRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVFSMGDKVKAVDIAKAAIEHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +M ELKDVK V NP+E+LLVVDAMTGQ+A + TFN + +
Sbjct: 183 GNNVVIIDTAGRLHIDEDLMQELKDVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+++++GKPIK VG GE+M D+E F+PDRMA RILGMGDVLS
Sbjct: 243 SGIILTKLDGDTRGGAALSIRDITGKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + Q++A ++ +K+++ F+F+D+L + ++G ++++I MIPG+ ++
Sbjct: 303 LIEKAQQAIDQDEASKLSEKMLNQEFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELE 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ EK + ++A+I++MT +ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 363 GIDFSQGEKQMATVKAIIQSMTAKERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|118443987|ref|YP_878286.1| signal recognition particle protein [Clostridium novyi NT]
gi|118134443|gb|ABK61487.1| signal recognition particle protein [Clostridium novyi NT]
Length = 451
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/417 (49%), Positives = 298/417 (71%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ KL+G+ L++++I + MR+++ ALLEADV+ +VR+FV+ E+ +G
Sbjct: 3 FEGLAEKLQDTLKKLRGKGKLSEKDIKQAMREVKLALLEADVNYKIVRQFVKTTGEKCLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV DEL +LMG S++ F+ TVI+L GLQG GKTT++ KLA
Sbjct: 63 EEVMKSLTPGQQVVKIVNDELKELMGSTESKIEFSNKGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA D+YRPAAI QL ++G+Q+ VPV++ G +V P IAK +E AK
Sbjct: 123 LQLRKNNKKPLLVACDIYRPAAIKQLQVVGKQIDVPVFSMGDKVSPVDIAKASIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N +VVI+DTAGRL ID+A+M+EL+++K + P E+LLVVD+MTGQ+A + TFN ++ I
Sbjct: 183 NNNVVIIDTAGRLHIDEALMEELENIKGSVEPNEILLVVDSMTGQDAVNVSETFNNKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS
Sbjct: 243 TGVILTKLDGDTRGGAALSIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQE + +E A+E+ K+++ F+ DF + +MG ++++I MIPG+ ++
Sbjct: 303 LIEKAQEAIDEEKAKELGDKMLNLEFNLEDFKDSMAQMKKMGPLTKIIEMIPGVNSKQLQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ EK +K +EAMI++MT +ER P L+A SP R++R+A SG QQV++L+
Sbjct: 363 GLDLSRGEKEIKKIEAMIDSMTLKERRDPNLVASSPSRKRRIANGSGCNVQQVNKLL 419
>gi|347734048|ref|ZP_08867100.1| signal recognition particle protein [Desulfovibrio sp. A2]
gi|347517140|gb|EGY24333.1| signal recognition particle protein [Desulfovibrio sp. A2]
Length = 515
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 291/433 (67%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L + K G L + NI + +R++R ALLEADV+ VVR F++ V E+ +
Sbjct: 1 MFDSLSDRLTGVFRKFSGTGRLDEANIQDGLREVRLALLEADVNFKVVRDFIERVRERCL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VKIV DELV+L+GG ++L +P VI++ GLQG GKTT SAKL
Sbjct: 61 GQDVLKSLTPAQQVVKIVHDELVELLGGGTTQLDLRGKQPYVIMMVGLQGSGKTTSSAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQ L DVYRPAAIDQL L +Q+ +P Y + + P IA +E+A++
Sbjct: 121 ANLLRKQKMRPYLAPADVYRPAAIDQLHTLAKQLDIPAYPSAPGMNPVDIAAAAVEDARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K +VVIVDTAGRL ID+ +M EL +K + P E+L V DAMTGQ+A + +FN +
Sbjct: 181 KQCNVVIVDTAGRLHIDETLMQELVSIKGRVEPQEILFVADAMTGQDAVTVAESFNAALD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G +LTK+DGD+RGGAALS++ V+GKP+K VG GE++ D+E F+PDR+AGRILGMGDV+
Sbjct: 241 ISGVVLTKMDGDARGGAALSIRSVTGKPVKFVGMGEKLSDIEVFHPDRVAGRILGMGDVM 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ ++ E+AEE+ +K A FD DF Q R + ++GS+ ++ +IPGMG +
Sbjct: 301 TLIEKAQSTIKAEEAEELGRKFQKAEFDLEDFRTQMRRLKKLGSLEGILKLIPGMGALRE 360
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
++ EK + +EA+I +MT +ER P++L S RR+R+A SG T Q V+QL+
Sbjct: 361 KLGEMNVPEKEMGRVEAIINSMTMQERRNPKVLNGS--RRQRIAMGSGTTVQDVNQLIKN 418
Query: 502 LFQMRVRMKNLMG 514
QMR MK +MG
Sbjct: 419 FEQMREMMKKVMG 431
>gi|225010553|ref|ZP_03701024.1| signal recognition particle protein [Flavobacteria bacterium
MS024-3C]
gi|225005382|gb|EEG43333.1| signal recognition particle protein [Flavobacteria bacterium
MS024-3C]
Length = 445
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 291/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDKALHVLKGHGQITEINVAETLKEVRRALLDADVNFKIAKDFTNTVREKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL +LMGGE L A + P++IL+AGLQG GKTT S KL
Sbjct: 61 GQQVLTSLQPGQLMVKLVKDELTQLMGGESVGLNLADN-PSIILMAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A YLK K+ K+ +LVA DVYRPAAIDQL ++G+Q+GV VY+ E P IA+ G+ AK
Sbjct: 120 ALYLKSKKSKNPLLVACDVYRPAAIDQLQVVGDQIGVAVYSNKEESNPVAIAQAGIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
++VI+DTAGRL +D+AMM E+ ++ + + P+E L VVDAMTGQ+A F+ +
Sbjct: 180 ANGHNLVIIDTAGRLAVDEAMMAEIANIHKAITPSETLFVVDAMTGQDAVNTAKAFHDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME L+ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVTKPIKFIGTGEKMEALDVFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ +E+A ++QKKI F F+DFL Q + + +MG++ ++GMIPG GK
Sbjct: 300 VSLVERAQDQFDEEEARKIQKKIAKNTFGFDDFLTQIQQIKKMGNLKDLMGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER +P L S R+KR+A+ SG+T Q V+QL+ Q
Sbjct: 360 KG-LDIDDDAFKHIEAIIHSMTPLERSQPTRLDAS--RKKRIAKGSGRTIQDVNQLLKQF 416
>gi|313115226|ref|ZP_07800709.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622455|gb|EFQ05927.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 451
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/429 (50%), Positives = 285/429 (66%), Gaps = 6/429 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L + KL+G LT+ +I MR++R ALLEADV+ V + F VSE+A+G
Sbjct: 3 FESLTDRLAGVFKKLRGHGKLTEADIKAAMREVRMALLEADVNYKVAKDFCAKVSERAMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGG-EVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
++ + P QQ+VKIV +ELV LMGG E + L T+I+L GLQG GKTT +AKL
Sbjct: 63 QEVMESLTPAQQVVKIVNEELVALMGGSEAARLNIKNKGQTIIMLCGLQGNGKTTHAAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A Y KQG+ MLVA D+YRPAAIDQL ++G+Q G PV+T KP +IAK+ L AK
Sbjct: 123 AKYFIKQGRRPMLVACDIYRPAAIDQLQVVGKQAGAPVFTL-PGAKPPEIAKKALAHAKD 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VI+DTAGRLQID +M EL D+K + E LLVVDAM GQ+A + TFN ++G
Sbjct: 182 YGNDIVILDTAGRLQIDDVLMQELVDIKEAVPVDETLLVVDAMAGQDAVNVAKTFNEKVG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTK DGD+RGGAALSV V+GKPIK G GE+++DL+ F+PDRMA RILGMGDVL
Sbjct: 242 IDGIILTKTDGDTRGGAALSVLAVTGKPIKFQGTGEKLDDLDVFHPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +E+AQE ++ AEE K++M FD ND L Q + +MG ++ M+PG I P
Sbjct: 302 SLIERAQETADEKAAEETAKRMMENKFDMNDMLDQFAQIRKMGGAGAMLSMLPGGSGIDP 361
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+QV EK+ +EAMI +MT EEREKP ++ +P R++R+A SG T V++L+ Q
Sbjct: 362 SQVD--EKAFDRIEAMIYSMTKEEREKPSII--NPKRKRRIAAGSGTTVADVNKLLKQFE 417
Query: 504 QMRVRMKNL 512
M+ MK
Sbjct: 418 MMQKMMKQF 426
>gi|169342711|ref|ZP_02863752.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
gi|169299217|gb|EDS81287.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
Length = 452
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/417 (47%), Positives = 304/417 (72%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ KLKG+ LT+++I E MR+++ ALLEADV+ VV++F+ V ++ VG
Sbjct: 3 FDGLASKLQDTLKKLKGKGKLTEKDIKEAMREVKLALLEADVNFKVVKKFISNVKDKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL LMG S+L ++ + PTV +L GLQG GKTT++ KLA
Sbjct: 63 EEVLNSLTPGQQVIKIVNDELTTLMGETESKLKYSDNGPTVFMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA D+YRPAAI QL ++G+Q+ +PV++ G +VK IAK +E AK
Sbjct: 123 LHLRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVFSMGDKVKAVDIAKAAIEHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +M ELKDVK V NP+E+LLVVDAMTGQ+A + TFN + +
Sbjct: 183 GNNVVIIDTAGRLHIDEDLMQELKDVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+++++GKPIK VG GE+M D+E F+PDRMA RILGMGDVLS
Sbjct: 243 SGIILTKLDGDTRGGAALSIRDITGKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + Q++A ++ +K+++ F+F+D+L + ++G ++++I MIPG+ ++
Sbjct: 303 LIEKAQQAIDQDEASKLSEKMLNQEFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELE 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ EK + ++A+I++MT +ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 363 GIDFSQGEKQMATVKAIIQSMTAKERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|187934489|ref|YP_001885443.1| signal recognition particle protein [Clostridium botulinum B str.
Eklund 17B]
gi|187722642|gb|ACD23863.1| signal recognition particle protein [Clostridium botulinum B str.
Eklund 17B]
Length = 452
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/433 (45%), Positives = 303/433 (69%), Gaps = 5/433 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + KLKG+ LT+++I E MR+++ ALLEADV+ VV+ F+ VS + VG
Sbjct: 3 FEGLGEKLQETFRKLKGKGKLTEKDIKEAMREVKLALLEADVNYKVVKGFISTVSSKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMGG S++ ++ S TVI+L GLQG GKTT+ KLA
Sbjct: 63 NEVLESLTPGQQVIKIVNEELTNLMGGSESKINYSSSGTTVIMLVGLQGAGKTTMCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA DVYRPAAI QL I+G+Q+ +PV++ G +V P IAK G+ K
Sbjct: 123 LELRKNNKKPLLVACDVYRPAAIKQLEIVGKQIEIPVFSMGDKVNPVDIAKAGIAHGKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+++I+DTAGRL ID+A+M EL+D+K +NP+E+LLVVD+MTGQ+A + +FN ++ +
Sbjct: 183 GNNIIIIDTAGRLHIDEALMQELQDIKENVNPSEILLVVDSMTGQDAVNVAESFNKDLDV 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS++ ++ KPIK +G GE++ D E F+PDRM+ RILGMGDVLS
Sbjct: 243 TGVILTKLDGDTRGGAALSIRSITEKPIKYIGTGEKLSDFEVFHPDRMSSRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ + +++A ++ K++++ F+FND+L + ++G +++++ MIPGM ++
Sbjct: 303 LIEKAQSAIDEKEAADLGKRMLNQEFNFNDYLTAIEQMKKLGPLNKILEMIPGMNSKELQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELL---AESPVRRKRVAQDSGKTEQQVSQLV 499
+ + E ++ +++I++MT +ER P LL + + R+KRVA+ +G T Q+V++LV
Sbjct: 363 NVDLSKGEDAINKTKSVIQSMTEKERTNPVLLMSGSTASSRKKRVARGAGTTIQEVNKLV 422
Query: 500 AQLFQMRVRMKNL 512
M+ M+++
Sbjct: 423 KSYEMMKKNMRHM 435
>gi|116618655|ref|YP_819026.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116097502|gb|ABJ62653.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 491
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 285/428 (66%), Gaps = 6/428 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR+IR ALLEADV+ V++FV V E+A G
Sbjct: 3 FENLTERLSKAIKNLTGHGRVSEEDLRATMREIRLALLEADVNYDTVKKFVANVREKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL MG E L + PT+I++AGLQG GKTT AKLA
Sbjct: 63 TDIMEGLNPAQQIVKIVNDELTATMGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + +L+A D+YRPAAIDQL ILG + +PV++ GT+V P I + GLE+A +
Sbjct: 123 YKLKNENNARPLLIAADIYRPAAIDQLEILGRDLDIPVFSMGTDVNPRDIVRAGLEKAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD+ + +P E+LL VDAMTGQ AA F+ +
Sbjct: 183 NKNDYVFIDTAGRLQIDEELMQELKDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E+ + +K+ FDFNDF+ Q + V MG M ++ MIPGM P
Sbjct: 303 TLIEKAQRDFDEEEQTKQLEKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K +EA++ +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALANVNLDAKQFAHLEAIVGSMTPEERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRM 509
QMR M
Sbjct: 420 FDQMRKMM 427
>gi|429205348|ref|ZP_19196625.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
gi|428146420|gb|EKW98659.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
Length = 479
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 297/429 (69%), Gaps = 8/429 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +AVG
Sbjct: 3 FEGLTERLQNAIAKLRRKGKISENDVKEVMREIRLALLEADVNFKVVKDFVKQVRTRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL+K+MG E L +K PT+I++ GLQG GKTT ++KLA
Sbjct: 63 SEVLESLTPAQQIVKIVNEELIKVMGDEAVPLNHSKKIPTIIMMVGLQGAGKTTTASKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK++ K+ +++A DVYRPAAI+QL ILG++ +PV+ GT+V P +I +QGL +A
Sbjct: 123 AKLKRENKARPLMIAADVYRPAAIEQLKILGKENDIPVFEMGTDVSPVEIVRQGLAQATA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M EL ++ + P E+LL VDAMTGQ A + FN ++
Sbjct: 183 NKNDYVFIDTAGRLQIDEKLMAELAQIEELAQPDEILLTVDAMTGQNAVEVAQGFNDQLN 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M+DL+ FYPDRMA RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMDDLDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ E A+++++K+ FDFNDFL Q + MGS+ +I MIPG+ P
Sbjct: 303 TLIEKAQRDYDAEKAKKLEEKMRENTFDFNDFLDQMNQIQNMGSLQDIIKMIPGLAN-NP 361
Query: 444 AQVREAEKSLKIME---AMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
A ++ A K ME A++ +MT ERE P+LL +P RR+R+A SG+ Q+V++++
Sbjct: 362 A-LKNANIDPKDMERTKAIVYSMTKAERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIK 418
Query: 501 QLFQMRVRM 509
Q QMR M
Sbjct: 419 QFKQMRDMM 427
>gi|295135662|ref|YP_003586338.1| signal recognition particle protein [Zunongwangia profunda SM-A87]
gi|294983677|gb|ADF54142.1| signal recognition particle protein [Zunongwangia profunda SM-A87]
Length = 442
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 291/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L++A + LKG +T+ N+ E ++++RRAL++ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDSALHVLKGHGQITEVNVAETLKEVRRALVDADVNYKIAKEFTNTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL LMGGE + + + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTALKPGQLMVKLVKDELTDLMGGEAAGVNLS-GDPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAI+QL ++GEQ+GV V++ P I+K + AK
Sbjct: 120 ANYLKNKKTKKPLLVACDVYRPAAINQLHVVGEQLGVEVFSDEGNQDPVAISKAAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL +D+AMM E+ ++ + P E L VVD+MTGQ+A FN +
Sbjct: 180 ENGHNVVIIDTAGRLAVDEAMMTEISNIHTAIEPHETLFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 DFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFLKQ + + +MGSM ++GMIPG GK+
Sbjct: 300 VSLVERAQEQYDEEEARKLQKKIAKNAFGFDDFLKQLQQIKKMGSMKDLLGMIPGAGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP+ER P+++ S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 360 K-DVDIDDDAFKGIEAIIHSMTPDERSTPKIINSS--RKKRIAKGSGTSVQEVNQLLKQF 416
>gi|347758274|ref|YP_004865836.1| signal recognition particle protein [Micavibrio aeruginosavorus
ARL-13]
gi|347590792|gb|AEP09834.1| signal recognition particle protein [Micavibrio aeruginosavorus
ARL-13]
Length = 497
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/427 (50%), Positives = 298/427 (69%), Gaps = 8/427 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L + KL+G+ +L + ++ + +R+IR ALLEADV+LPVV++FV+ V E+AV
Sbjct: 1 MFESLGDRLGKVFGKLRGKGSLNETDVSDALREIRVALLEADVALPVVKQFVETVRERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +IR V P QQ+VKIV D LV ++G + ++L FA + P L+ GLQG GKTT SAK+
Sbjct: 61 GQEVIRSVTPAQQVVKIVHDALVDMLGSDTTDLNFA-TPPCAYLMVGLQGSGKTTTSAKI 119
Query: 204 ANYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
+L KQ K ++ + DVYRPAA +QL LG Q GV KP IA + ++ A+
Sbjct: 120 GKFLTDKQRKKVLMASLDVYRPAAQEQLAQLGRQTGVATLPVIEGQKPVDIALRAMDTAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K+ DVVI+DTAGRL ID+AMM E K V+ +NPTE LLVVDAMTGQ+A + F+ ++
Sbjct: 180 KEGYDVVILDTAGRLSIDEAMMAEAKAVRDTINPTETLLVVDAMTGQDAVNTASAFDAQV 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+TG +LT++DGD+RGGAALS+K V+GKPIKL+G GE+ + LE F+PDR+AGRILGMGDV
Sbjct: 240 AVTGIVLTRVDGDARGGAALSMKAVTGKPIKLIGVGEKWDALEQFHPDRIAGRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKA E + QEDA +M +K +FDFND L Q R + +MG +S ++ M+PG+G++
Sbjct: 300 VSLVEKAVETIDQEDAMKMAQKFQKGDFDFNDLLSQMRQMQKMGGVSSLVKMLPGLGQMA 359
Query: 443 PAQVREA---EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+Q+ A + +LK EA+I +MTP ER +PELL S R++R+A SG T Q +++L
Sbjct: 360 -SQLENANIDDGALKKQEAIILSMTPAERSRPELLNAS--RKRRIATGSGTTVQDINKLH 416
Query: 500 AQLFQMR 506
QL QM+
Sbjct: 417 KQLQQMQ 423
>gi|225419757|ref|ZP_03762060.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
gi|225041594|gb|EEG51840.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
Length = 459
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/434 (48%), Positives = 302/434 (69%), Gaps = 5/434 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L++ + +++++ ALLEADVS VV++F+ ++ +QAVG
Sbjct: 3 FESLTDKLQNVFKGLRSKGKLSEAEVKAALKEVKMALLEADVSFKVVKQFINSIQDQAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKL 203
+ + Q ++KIV +ELVKLMG E +E+ TVI++ GLQG GKTT +AKL
Sbjct: 63 AEVFGKLDAGQTVIKIVNEELVKLMGSETTEVDLKPGNEITVIMMTGLQGAGKTTTTAKL 122
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A LK K+G+ +LVA DVYRPAAI QL I GE+VGVPV+ G + KP IAK +E A
Sbjct: 123 AAQLKAKKGRKPLLVACDVYRPAAIKQLQINGEKVGVPVFAMGDKHKPVDIAKAAMEHAA 182
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K +++VI+DTAGRL ID+AMMDEL ++K L+ + +LVVDAMTGQ+A + TFN +I
Sbjct: 183 KNGMNLVILDTAGRLHIDEAMMDELVEIKDQLDVHQTILVVDAMTGQDAVNVSETFNNKI 242
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GI G +LTKLDGD+RGGAALS++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+
Sbjct: 243 GIDGVVLTKLDGDTRGGAALSIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDI 302
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KI 441
+S +EKA + +E A EM +K+ A FD+NDFL Q + + ++G M ++ M+PG+G ++
Sbjct: 303 MSLIEKATAEIDEEQAREMTQKLRKAEFDYNDFLAQMQQIKKIGGMGSILSMLPGVGNQL 362
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ + E EKS+K +E++I +MT +ER P L+ +P R+KR+A+ +G +V++LV Q
Sbjct: 363 SGVDMDEGEKSMKRVESIILSMTKDERANPGLI--NPSRKKRIARGAGVDISEVNRLVKQ 420
Query: 502 LFQMRVRMKNLMGV 515
QM+ MK + G+
Sbjct: 421 FDQMKKMMKQMPGM 434
>gi|50914250|ref|YP_060222.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
gi|50903324|gb|AAT87039.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
Length = 522
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 301/436 (69%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P +Q++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTKQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEEDARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NHNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GER+ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGERITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|322385512|ref|ZP_08059156.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|417921132|ref|ZP_12564627.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|321270250|gb|EFX53166.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|342835052|gb|EGU69310.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
Length = 522
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PTVI++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAILGSDTAEIIKSPKIPTVIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEFPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELADVKALAQPNEILLVVDAMIGQEAANVAREFNNQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+GRILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKAAQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEELLKMLPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|163786134|ref|ZP_02180582.1| signal recognition particle protein [Flavobacteriales bacterium
ALC-1]
gi|159877994|gb|EDP72050.1| signal recognition particle protein [Flavobacteriales bacterium
ALC-1]
Length = 443
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 290/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG ++T+ N+ E ++++RRALL+ADV+ + ++F V E+A+
Sbjct: 1 MFNNLSDKLDKALHVLKGHGSITEVNVAETLKEVRRALLDADVNFKIAKQFTNRVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ +E + P++IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTTLQPGQLMVKIVKDELTELMGGD-AEGINLSGNPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LVA DVYRPAAIDQL ++G+Q+GV V++ P I++ G+ AK
Sbjct: 120 ANYLKSKKTKKPLLVACDVYRPAAIDQLHVVGDQIGVEVFSDRGNNDPVAISQAGIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVI+DTAGRL +D+AMM E+ ++ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGHNVVIIDTAGRLAVDEAMMTEISNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDIL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFLKQ + + +MG+M +IGMIPG GK
Sbjct: 300 VSLVERAQEQFDEEEARKLQKKIAKNQFGFDDFLKQIQQIKKMGNMKDLIGMIPGAGK-M 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P ++ S R+KR+ + SG + Q+V+QL+ Q
Sbjct: 359 MKDIDIDDDAFKGIEAIIHSMTPTERANPSVINAS--RKKRIGKGSGTSVQEVNQLLKQF 416
>gi|323340725|ref|ZP_08080977.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|323091848|gb|EFZ34468.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 493
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 306/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KLK + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +AVG
Sbjct: 15 FEGLTERLQNAISKLKRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKEVKNRAVG 74
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL+K+MG L +K PTVI++ GLQG GKTT + KLA
Sbjct: 75 AEVLESLTPAQQIVKIVNEELIKVMGESAVSLNKSKKIPTVIMMVGLQGAGKTTTAGKLA 134
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ + +++A DVYRPAA+DQL +G+ + VPV+ GT+V P +I +QG++ A++
Sbjct: 135 YKLKKEENARPLMIAADVYRPAAVDQLKTVGKSIDVPVFELGTDVDPVEIVRQGMKLAEE 194
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL +K + +P E+LL VD+MTGQ A + FN +
Sbjct: 195 QKNDYVIIDTAGRLQIDEKLMNELARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLD 254
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M L+ FYP+RMA RILGMGD+L
Sbjct: 255 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTALDVFYPERMASRILGMGDML 314
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ K+ FDFNDF++Q V MG + ++ MIPGM P
Sbjct: 315 TLIEKAQQDFDQKKAEELADKMRENTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NP 373
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ K ++ +A++ +MTP ERE P++L +P RR+R+A SG+ Q+V++++ Q
Sbjct: 374 ALKNVKVDPKDIEHTKAIVYSMTPAEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQ 431
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR ++M M G+ + N+
Sbjct: 432 FKQMR----DMMQKMTNGNFGGMENM 453
>gi|422826334|ref|ZP_16874513.1| signal recognition particle protein [Streptococcus sanguinis SK678]
gi|324994452|gb|EGC26365.1| signal recognition particle protein [Streptococcus sanguinis SK678]
Length = 524
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSNTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GT+V +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTDVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|294507645|ref|YP_003571703.1| signal recognition particle protein [Salinibacter ruber M8]
gi|294343973|emb|CBH24751.1| signal recognition particle protein [Salinibacter ruber M8]
Length = 461
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 300/453 (66%), Gaps = 9/453 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + G+ + + N+ E MR+IRRALL ADV+ V + F V E A
Sbjct: 1 MFEGLSQKLEGALQSVTGQGRIDEVNVAETMREIRRALLNADVNYQVAKEFTANVKEAAT 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P +QL KI+ DEL +++GGE + A++ PTVIL+AGLQG GKTT AKL
Sbjct: 61 GEDVLTSVTPGEQLTKIMHDELTRVLGGEHEGIEMAETPPTVILVAGLQGSGKTTFCAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTA---GTEVKPS-QIAKQGLE 259
A + +K+G + +L A DVYRPAA+DQL L +QV PVY+ G V+ + ++A + +
Sbjct: 121 ARHFRKEGHAPLLAASDVYRPAAVDQLKTLADQVNAPVYSIEDDGEIVEDAVRVANEAVA 180
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN 319
EA+ D+VI+DTAGR+ ID+AMM E++D+K + P E L VVD+MTGQ+A FN
Sbjct: 181 EAQNTARDIVIIDTAGRMHIDEAMMQEVEDIKTTVAPNETLFVVDSMTGQDAVNTAKEFN 240
Query: 320 IEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 379
I G +L+KLDGD+RGGAALS++ V KPIK GE+++ L PFYPDRMA RILGM
Sbjct: 241 ERIDYDGVVLSKLDGDTRGGAALSIRTVVNKPIKFASTGEKLDALTPFYPDRMAQRILGM 300
Query: 380 GDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG 439
GDV+SFVE+AQE +++AE +Q+KI S FD DF Q + + +MGS+ ++GMIPG+G
Sbjct: 301 GDVVSFVERAQEQYDEQEAERLQEKIRSEEFDLQDFYDQLQRIQKMGSIKELMGMIPGVG 360
Query: 440 -KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQL 498
KI+ + E++ +EA+I++MTPEER P++L + RR+R+A+ SG + V+QL
Sbjct: 361 NKISDLDID--EEAFTHIEAIIQSMTPEERAHPDIL--NGTRRRRIARGSGNEVRDVNQL 416
Query: 499 VAQLFQMRVRMKNLMGVMEGGSLPALSNLEDAL 531
V+Q +M+ MK + + G +S+L D +
Sbjct: 417 VSQFEEMKDMMKTMQKMTSKGQDVDISSLMDKI 449
>gi|392428759|ref|YP_006469770.1| signal recognition particle protein [Streptococcus intermedius
JTH08]
gi|419776601|ref|ZP_14302523.1| signal recognition particle protein [Streptococcus intermedius
SK54]
gi|383846012|gb|EID83412.1| signal recognition particle protein [Streptococcus intermedius
SK54]
gi|391757905|dbj|BAM23522.1| signal recognition particle protein [Streptococcus intermedius
JTH08]
Length = 524
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 302/439 (68%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRMALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEAARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAIEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKVLAQPNEILLVVDAMIGQEAANVAREFNDQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKSVMQ---GVMSG 433
>gi|335996783|ref|ZP_08562700.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|417974277|ref|ZP_12615098.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|335351853|gb|EGM53344.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|346329274|gb|EGX97572.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 481
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 306/446 (68%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KLK + +++ ++ E MR+IR ALLEADV+ VV+ FV+ V +AVG
Sbjct: 3 FEGLTERLQNAISKLKRKGKISESDVKEVMREIRLALLEADVNFKVVKDFVKEVKNRAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL+K+MG L +K PTVI++ GLQG GKTT + KLA
Sbjct: 63 AEVLESLTPAQQIVKIVNEELIKVMGESAVSLNKSKKIPTVIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ + +++A DVYRPAA+DQL +G+ + VPV+ GT+V P +I +QG++ A++
Sbjct: 123 YKLKKEENARPLMIAADVYRPAAVDQLKTVGKSIDVPVFELGTDVDPVEIVRQGMKLAEE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D VI+DTAGRLQID+ +M+EL +K + +P E+LL VD+MTGQ A + FN +
Sbjct: 183 QKNDYVIIDTAGRLQIDEKLMNELARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+GKPIK +G+GE+M L+ FYP+RMA RILGMGD+L
Sbjct: 243 VTGVVLTKLDGDTRGGAALSIRAVTGKPIKFIGQGEKMTALDVFYPERMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ Q+ AEE+ K+ FDFNDF++Q V MG + ++ MIPGM P
Sbjct: 303 TLIEKAQQDFDQKKAEELADKMRENTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ K ++ +A++ +MTP ERE P++L +P RR+R+A SG+ Q+V++++ Q
Sbjct: 362 ALKNVKVDPKDIEHTKAIVYSMTPAEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
QMR ++M M G+ + N+
Sbjct: 420 FKQMR----DMMQKMTNGNFGGMENM 441
>gi|83814688|ref|YP_445750.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
gi|83756082|gb|ABC44195.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
Length = 461
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 300/453 (66%), Gaps = 9/453 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE A + G+ + + N+ E MR+IRRALL ADV+ V + F V E A
Sbjct: 1 MFEGLSQKLEGALQSVTGQGRIDEVNVAETMREIRRALLNADVNYQVAKEFTANVKEAAT 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P +QL KI+ DEL +++GGE + A++ PTVIL+AGLQG GKTT AKL
Sbjct: 61 GEDVLTSVTPGEQLTKIMHDELTRVLGGEHEGIEMAETPPTVILVAGLQGSGKTTFCAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTA---GTEVKPS-QIAKQGLE 259
A + +K+G + +L A DVYRPAA+DQL L +QV PVY+ G V+ + ++A + +
Sbjct: 121 ARHFRKEGHAPLLAASDVYRPAAVDQLKTLADQVNAPVYSIEDDGEIVEDAVRVANEAVT 180
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN 319
EA+ D+VI+DTAGR+ ID+AMM E++D+K + P E L VVD+MTGQ+A FN
Sbjct: 181 EAQNTARDIVIIDTAGRMHIDEAMMQEVEDIKTTVAPNETLFVVDSMTGQDAVNTAKEFN 240
Query: 320 IEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 379
I G +L+KLDGD+RGGAALS++ V KPIK GE+++ L PFYPDRMA RILGM
Sbjct: 241 ERIDYDGVVLSKLDGDTRGGAALSIRTVVNKPIKFASTGEKLDALTPFYPDRMAQRILGM 300
Query: 380 GDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG 439
GDV+SFVE+AQE +++AE +Q+KI S FD DF Q + + +MGS+ ++GMIPG+G
Sbjct: 301 GDVVSFVERAQEQYDEQEAERLQEKIRSEEFDLQDFYDQLQRIQKMGSIKELMGMIPGVG 360
Query: 440 -KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQL 498
KI+ + E++ +EA+I++MTPEER P++L + RR+R+A+ SG + V+QL
Sbjct: 361 NKISDLDID--EEAFTHIEAIIQSMTPEERAHPDIL--NGTRRRRIARGSGNEVRDVNQL 416
Query: 499 VAQLFQMRVRMKNLMGVMEGGSLPALSNLEDAL 531
V+Q +M+ MK + + G +S+L D +
Sbjct: 417 VSQFEEMKDMMKTMQKMTSKGQDVDISSLMDKI 449
>gi|422855528|ref|ZP_16902186.1| signal recognition particle protein [Streptococcus sanguinis SK1]
gi|327462217|gb|EGF08544.1| signal recognition particle protein [Streptococcus sanguinis SK1]
Length = 524
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSNTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GT+V +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTDVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|300854474|ref|YP_003779458.1| signal recognition particle GTPase [Clostridium ljungdahlii DSM
13528]
gi|300434589|gb|ADK14356.1| predicted signal recognition particle GTPase [Clostridium
ljungdahlii DSM 13528]
Length = 449
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 305/436 (69%), Gaps = 2/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ KL+G+ L++++I + MR+++ ALLEADV+ VV+ F+++VSE+ +G
Sbjct: 3 FEGLASKLQETLKKLRGKGKLSEKDIKDAMREVKLALLEADVNYKVVKNFIKSVSEKCMG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV +EL LMG S + + + TVI+L GLQG GKTT+ KLA
Sbjct: 63 EEVLKSLTPAQQVIKIVNEELTLLMGKNESGIEYNSNGLTVIMLVGLQGAGKTTMCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K+ K +L A D+YRPAAI QL ++G+++ VPV++ G +V I K LE AK
Sbjct: 123 LQLRKKNKKPLLAACDIYRPAAIKQLQVVGKEIDVPVFSMGDKVTAVDICKGALEYAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N++VVI+DTAGRLQID+ +M ELK +K +NP E++LVVDAMTGQ+A + ++FN ++ I
Sbjct: 183 NLNVVIIDTAGRLQIDEELMGELKQIKENINPDEIMLVVDAMTGQDAVNVASSFNEQLNI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS++ ++ KPIK VG GE+M DL+ FYPDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIRAMTDKPIKFVGMGEKMNDLQVFYPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKIT 442
+EKAQ+ + +E+AE++ ++++ F+F DFL + +MG +S+++ M+PG M ++
Sbjct: 303 LIEKAQQSIDKEEAEKLGNRMLNKEFNFEDFLAIMQQTKKMGPISKLMEMVPGVNMKELK 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ E+ L +E +I +MT +ER P +++ S R+KR+A SG T Q V++L+
Sbjct: 363 GVDFSKGEQELAKIECIINSMTVKERRNPSIISGSSSRKKRIALGSGTTIQMVNKLLKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
+++ MK L G+ +G
Sbjct: 423 EKIKKTMKQLNGMKKG 438
>gi|260663573|ref|ZP_05864463.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
gi|260552114|gb|EEX25167.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
Length = 484
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 303/448 (67%), Gaps = 13/448 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A KL+ + +T+ ++ E MR+IR ALLEADV+ VV+ FV+ V E+A G
Sbjct: 11 FEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKAAG 70
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++G+ P QQ+VKIV DEL ++MG + L + PTVI++ GLQG GKTT + KLA
Sbjct: 71 AEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGKLA 130
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ + + +A DVYRPAAI QL + + VPV+ GT+V P +I +QG+E AK+
Sbjct: 131 KRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVAKE 190
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K+ D VI+DTAGRLQID+ +M+EL +K + P E+LLVVDAMTGQ A F+ ++
Sbjct: 191 KHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQLD 250
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAA+S++ V+GKPIK VG GE+M++L+ F+PDRMA RILGMGD++
Sbjct: 251 ITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGDMM 310
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE QE A + K+ +FDFNDFL Q + +MG + ++ M+PGM P
Sbjct: 311 TLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN-NP 369
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + K ++A+I +MTPEERE P+++ +P RR+R+A SG+ +V++++ Q
Sbjct: 370 ALQNINLDPKQFAHIKAIIYSMTPEERENPDMM--NPSRRRRLAAGSGRPIVEVNRMIKQ 427
Query: 502 LFQMRVRMK-----NLMGV--MEGGSLP 522
QMR M+ NL G+ + GG +P
Sbjct: 428 FNQMRKMMRQVTNGNLSGMENLMGGQMP 455
>gi|19746132|ref|NP_607268.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
gi|19748308|gb|AAL97767.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
Length = 520
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 301/436 (69%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P +Q++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTKQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEEDARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GER+ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGERITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|167758974|ref|ZP_02431101.1| hypothetical protein CLOSCI_01320 [Clostridium scindens ATCC 35704]
gi|167663381|gb|EDS07511.1| signal recognition particle protein [Clostridium scindens ATCC
35704]
Length = 449
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/426 (48%), Positives = 294/426 (69%), Gaps = 10/426 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + LT++++ E +++I+RALL ADV+ VV+ F++ V E+A+G
Sbjct: 3 FDSLTEKLQNIFKNLRSKGRLTEDDVKEALKEIKRALLAADVNFKVVKDFIKNVQERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK-SRPTVILLAGLQGVGKTTVSAKL 203
++ G+ P Q ++KIV +ELVKLMG E +E+ S TVI++AGLQG GKTT +AKL
Sbjct: 63 QDVMNGLNPGQMVIKIVNEELVKLMGSETTEIALQPGSAITVIMMAGLQGAGKTTTTAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A K +GK+ +LVA DVYRPAAI QL + GE+ GV V+ G KPS IAK +E A+K
Sbjct: 123 AGKYKVKGKNPLLVACDVYRPAAIKQLQVNGEKQGVEVFAMGESHKPSNIAKAAIEHAQK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VI+DTAGRL ID+ MM EL ++K +N + +LV+DAMTGQ+A + FN +IG
Sbjct: 183 NGNRIVILDTAGRLHIDEDMMAELAEIKEAVNVHQTILVIDAMTGQDAVNVAKEFNEKIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALSVK V+GKPI VG GE++ DLE FYPDRMA RILGMGDVL
Sbjct: 243 VDGVIVTKLDGDTRGGAALSVKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP----GMG 439
+ +EKA+ + +E A++M +K+ A FDF D+L+ + + MG + ++ M+P GMG
Sbjct: 303 TLIEKAEAEIDEEKAKQMSQKLKKAQFDFEDYLESVKQMKNMGGLGSIMSMMPALGAGMG 362
Query: 440 K---ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVS 496
K + Q +AEK++ MEAMI +MTPEER P+LL +P R+ R+A+ +G +V+
Sbjct: 363 KMKDLDEDQTAQAEKNMARMEAMIYSMTPEERRNPDLL--NPSRKHRIARGAGVDISEVN 420
Query: 497 QLVAQL 502
++V Q
Sbjct: 421 RMVKQF 426
>gi|406658389|ref|ZP_11066529.1| signal recognition particle protein [Streptococcus iniae 9117]
gi|405578604|gb|EKB52718.1| signal recognition particle protein [Streptococcus iniae 9117]
Length = 523
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/431 (46%), Positives = 297/431 (68%), Gaps = 4/431 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTQRLQGVFKTIRGKKKLSEQDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTGILGSETAEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I +GLE A+
Sbjct: 123 NKLIKEEDARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAIEIVTKGLELARD 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+A+M EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEALMGELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLN 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGDSRGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDSRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + Q+ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDQQKSMELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ +K + A++ +MT ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDDKQIARKRAIVSSMTKAERENPDLL--TPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLM 513
Q + M+ +M
Sbjct: 421 NQAKAMMQGMM 431
>gi|339625133|ref|ZP_08660922.1| signal recognition particle protein [Fructobacillus fructosus KCTC
3544]
Length = 489
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/427 (48%), Positives = 287/427 (67%), Gaps = 4/427 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G+ + +E++ +++IR ALLEADVS P V++F+ A+ E+A G
Sbjct: 3 FENLTERLSKALKNLTGKGKIHEEDLQASLKEIRLALLEADVSYPTVKKFIAAIREKAKG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ QQ+VKIV DEL LMG E L + PTVI++AGLQG GKTT AKLA
Sbjct: 63 AEILDGLNAPQQVVKIVNDELTALMGEEAVPLNKSDKIPTVIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ K+ +L+A DVYRPAAIDQL +LG+ + +PV++ GT+V P +I K GL++A+
Sbjct: 123 YKLKKENKARPLLIAADVYRPAAIDQLEVLGKDLDIPVFSEGTDVDPREIVKHGLKQAEA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD+ + P E+LL VDAMTGQ A F +
Sbjct: 183 NKNDYVFIDTAGRLQIDETLMTELKDIATIAQPDEILLTVDAMTGQNATETAEGFANALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGD+L
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+F+EKAQ + ++ E +K+ FDFNDF+ Q R V MG M +I MIPGM G
Sbjct: 303 TFIEKAQRDVDEKKQAEQLEKMRQNTFDFNDFVDQLRQVQNMGPMEDLIKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ K+ MEA++ +MT ERE P+LL +P RR+R+A +G+ +V++++ Q
Sbjct: 363 LQNLNIDPKTFTHMEAIVSSMTKAERENPDLL--NPSRRRRLAAGAGRPIVEVNKMLKQF 420
Query: 503 FQMRVRM 509
QM+ M
Sbjct: 421 DQMKKMM 427
>gi|309792455|ref|ZP_07686919.1| signal recognition particle protein [Oscillochloris trichoides
DG-6]
gi|308225443|gb|EFO79207.1| signal recognition particle protein [Oscillochloris trichoides DG6]
Length = 460
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/418 (49%), Positives = 294/418 (70%), Gaps = 4/418 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + KL + LT++++ E M+ +R ALLEADV+ VV+ FV V+EQA+
Sbjct: 1 MFESLSDRLQTVFQKLGSKGKLTEDDVREAMKQVRLALLEADVNFKVVKDFVAKVTEQAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P QQ+VKIV EL+ L+G + L ++ PTVI+L GLQG GKTT+SAKL
Sbjct: 61 GEEVTKSLTPHQQVVKIVHQELINLLGTDNVPLQESRPGPTVIMLVGLQGTGKTTLSAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A +L+K+G+ +L A D+YRPAAI QL LG+Q+G+ VY+ P +IA + +E AKK
Sbjct: 121 ALHLRKKGRRVLLAACDIYRPAAITQLESLGKQLGITVYSEPNSKHPPEIATRAVELAKK 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +VVIVDTAGRLQID+ +M EL+D+ + P E LLVVDAMTGQEA + TFN +
Sbjct: 181 ELYNVVIVDTAGRLQIDEPLMKELEDIDACVQPIERLLVVDAMTGQEAVRVAETFNQRVK 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGD 381
+TG ++TK+DGD+RGGAALSV+ V+G PIK + GE+++ LE F+PDR+A RILGMGD
Sbjct: 241 VTGLVMTKMDGDARGGAALSVRSVTGVPIKFISSGEKIDLNTLEAFHPDRLASRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
VLS +EKA+E+ E A+ M+K++ FDF DFL + ++G + ++IGMIPG+ ++
Sbjct: 301 VLSLIEKAEEMYDAEQAKRMEKRLRKGKFDFEDFLSAMHQMRKLGPLQQIIGMIPGLSQL 360
Query: 442 TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ +EK LK++EA+I +MT EER PEL+ S RR+R+A+ SG + Q+VSQLV
Sbjct: 361 ARDEELVSEKQLKLIEAIIFSMTIEERRNPELIKGS--RRERIAKGSGTSVQEVSQLV 416
>gi|383451325|ref|YP_005358046.1| Signal recognition particle protein [Flavobacterium indicum
GPTSA100-9]
gi|380502947|emb|CCG53989.1| Signal recognition particle protein [Flavobacterium indicum
GPTSA100-9]
Length = 445
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 290/420 (69%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT L+ A++ LKG +T N+ + ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLTDKLDKAFHILKGHGKITDVNVADTLKEVRRALLDADVNFKIAKDFTTRVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGGEVS + + P++IL++GLQG GKTT S KL
Sbjct: 61 GENVLTTLQPGQLMVKIVKDELTELMGGEVSGVNLS-GNPSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA D+YRPAAI+QL ++GEQ+GV VY+ +IA+ ++ AK
Sbjct: 120 ANFLKTKKSKKPLLVACDIYRPAAINQLHVVGEQIGVEVYSEPENKNAVEIAQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM+E+ +V + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAVDEEMMNEIANVHAAIQPQETLFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ +E+A ++QKKI F F+DFL Q + + +MGSM ++GMIPG GK
Sbjct: 300 VSLVERAQAQYDEEEARKLQKKIAKNEFGFDDFLNQIQQIKKMGSMKDLVGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTP+ER KP ++ R++R+A+ SG+ ++V+QL+ Q
Sbjct: 360 K-DVEINDDAFKHVEAIIQSMTPKERSKPSII--DVKRKQRIAKGSGRKIEEVNQLMKQF 416
>gi|373115225|ref|ZP_09529401.1| signal recognition particle protein [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670517|gb|EHO35596.1| signal recognition particle protein [Lachnospiraceae bacterium
7_1_58FAA]
Length = 452
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 289/430 (67%), Gaps = 3/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L AA+ KL+G+ L++ ++ E M++IR ALLEADV+ VV++FV V+E+A+G
Sbjct: 3 FEGLTEKLSAAFKKLRGKGRLSEADVKEAMKEIRMALLEADVNFKVVKQFVATVTERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P Q +VKIV +EL LMGGE ++L + PTV++L GL G GKTT AKLA
Sbjct: 63 SDVLESLTPAQMIVKIVNEELTALMGGENTKLTISPKPPTVVMLVGLNGAGKTTNGAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
++KKQGK +LVA D +RPAAI QL ++G+QV VPV+ G ++ P IA+ G+E AKK
Sbjct: 123 GFMKKQGKRPLLVACDTFRPAAITQLEVVGQQVDVPVFQMG-QIDPVDIARAGIEHAKKH 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D+V +DTAGRL +D+ +M++LK +K ++PTE+LL+VDAM GQ+A TF+ + I
Sbjct: 182 GNDIVFIDTAGRLHVDEELMEQLKVMKAAIDPTEILLIVDAMIGQDAVNAAKTFDEALDI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALS+K V+GKPIK VG GE+++ +E FYPDRMA RILGMGDVLS
Sbjct: 242 TGVMLTKLDGDARGGAALSIKAVTGKPIKFVGVGEKLDQVELFYPDRMASRILGMGDVLS 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ+ + A E+++K+ F DF Q + MGS+S + GM+PGM
Sbjct: 302 LIEKAQQTFDAKKAAELEQKLRKNKFTLADFYDQLVQIKGMGSLSDIAGMLPGMNAKALE 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
E +L EA+I +MTP ERE P LL S R+KR+A SG +++L+ Q
Sbjct: 362 GASVDENALARTEAIILSMTPAERENPSLLNNS--RKKRIAAGSGTQVVDINRLLKQFEM 419
Query: 505 MRVRMKNLMG 514
M+ K G
Sbjct: 420 MQQMTKQFSG 429
>gi|365842283|ref|ZP_09383312.1| signal recognition particle protein [Flavonifractor plautii ATCC
29863]
gi|364576124|gb|EHM53471.1| signal recognition particle protein [Flavonifractor plautii ATCC
29863]
Length = 452
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 289/430 (67%), Gaps = 3/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L AA+ KL+G+ L++ ++ E M++IR ALLEADV+ VV++FV V+E+A+G
Sbjct: 3 FEGLTEKLSAAFKKLRGKGRLSEADVKEAMKEIRMALLEADVNFKVVKQFVATVTERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P Q +VKIV +EL LMGGE ++L + PTV++L GL G GKTT AKLA
Sbjct: 63 SDVLESLTPAQMIVKIVNEELTALMGGENTKLTISPKPPTVVMLVGLNGAGKTTNGAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
++KKQGK +LVA D +RPAAI QL ++G+QV VPV+ G ++ P IA+ G+E AKK
Sbjct: 123 GFMKKQGKRPLLVACDTFRPAAITQLEVVGQQVDVPVFQMG-QIDPVDIARAGIEHAKKH 181
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
D+V +DTAGRL +D+ +M++LK +K ++PTE+LL+VDAM GQ+A TF+ + I
Sbjct: 182 GNDIVFIDTAGRLHVDEELMEQLKVMKAAIDPTEILLIVDAMIGQDAVNAAKTFDEALDI 241
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG +LTKLDGD+RGGAALS+K V+GKPIK VG GE+++ +E FYPDRMA RILGMGDVLS
Sbjct: 242 TGVMLTKLDGDARGGAALSIKAVTGKPIKFVGVGEKLDQVELFYPDRMASRILGMGDVLS 301
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA 444
+EKAQ+ + A E+++K+ F DF Q + MGS+S + GM+PGM
Sbjct: 302 LIEKAQQTFDAKKAAELEQKLRKNKFTLADFYDQLVQIKGMGSLSDIAGMLPGMNAKALE 361
Query: 445 QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 504
E +L EA+I +MTP ERE P LL S R+KR+A SG +++L+ Q
Sbjct: 362 GASVDENALARTEAIILSMTPAERENPSLLNNS--RKKRIAAGSGTQVVDINRLLKQFDM 419
Query: 505 MRVRMKNLMG 514
M+ K G
Sbjct: 420 MQQMTKQFSG 429
>gi|414564036|ref|YP_006042997.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847101|gb|AEJ25313.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 523
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 300/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++TL++ ++ E ++IR ALLEADV+LPVV+ F++ + E+AVG
Sbjct: 3 FESLTQRLQDVFKHIRGKKTLSEADVQEVTKEIRLALLEADVALPVVKTFIKRIRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTGILGSETAELDKSPKIPTVIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT I GL +AK+
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTNHSAVDIVANGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +MDEL++VK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRHDYVLIDTAGRLQIDEKLMDELREVKALAKPNEILLVVDSMIGQEAANVAYEFNNQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMA-TNP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ +K + A++ +MTPEERE+PELL +P RR+R+A SG + +V++ +
Sbjct: 362 ALANIKVDDKQIARKRAIVSSMTPEEREQPELL--TPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKAMMQ---GVMSG 433
>gi|336422979|ref|ZP_08603118.1| signal recognition particle protein [Lachnospiraceae bacterium
5_1_57FAA]
gi|336006825|gb|EGN36857.1| signal recognition particle protein [Lachnospiraceae bacterium
5_1_57FAA]
Length = 449
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/426 (48%), Positives = 294/426 (69%), Gaps = 10/426 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + LT++++ E +++I+RALL ADV+ VV+ F++ V E+A+G
Sbjct: 3 FDSLTEKLQNIFKNLRSKGRLTEDDVKEALKEIKRALLAADVNFKVVKDFIKNVQERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK-SRPTVILLAGLQGVGKTTVSAKL 203
++ G+ P Q ++KIV +ELVKLMG E +E+ S TVI++AGLQG GKTT +AKL
Sbjct: 63 QDVMNGLNPGQMVIKIVNEELVKLMGSETTEIALQPGSAITVIMMAGLQGAGKTTTTAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A K +GK+ +LVA DVYRPAAI QL + GE+ GV V+ G KPS IAK +E A+K
Sbjct: 123 AGKYKVKGKNPLLVACDVYRPAAIKQLQVNGEKQGVEVFAMGESHKPSNIAKAAIEHAQK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VI+DTAGRL ID+ MM EL ++K +N + +LV+DAMTGQ+A + FN +IG
Sbjct: 183 NGNRIVILDTAGRLHIDEDMMAELAEIKEAVNVHQTILVIDAMTGQDAVNVAKEFNEKIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALSVK V+GKPI VG GE++ DLE FYPDRMA RILGMGDVL
Sbjct: 243 VDGVIVTKLDGDTRGGAALSVKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP----GMG 439
+ +EKA+ + +E A++M +K+ A FDF D+L+ + + MG + ++ M+P GMG
Sbjct: 303 ALIEKAEAEIDEEKAKQMSQKLKKAQFDFEDYLESVKQMKNMGGLGSIMSMMPALGAGMG 362
Query: 440 K---ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVS 496
K + Q +AEK++ MEAMI +MTPEER P+LL +P R+ R+A+ +G +V+
Sbjct: 363 KMKDLDEDQTAQAEKNMARMEAMIYSMTPEERRNPDLL--NPSRKHRIARGAGVDISEVN 420
Query: 497 QLVAQL 502
++V Q
Sbjct: 421 RMVKQF 426
>gi|372210825|ref|ZP_09498627.1| signal recognition particle protein [Flavobacteriaceae bacterium
S85]
Length = 448
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/421 (47%), Positives = 286/421 (67%), Gaps = 5/421 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRALL+ADV+ + + F V ++A+
Sbjct: 1 MFNNLSDKLDKALHLLKGHGKITEVNVAETLKEVRRALLDADVNFKIAKEFTNTVKQKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q +VK+V+DEL +LMGGE + V P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLTSLNPGQLMVKLVKDELTELMGGETAG-VNLNGTPSVILMAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K +LV DVYRPAAI+QL ++GEQ+GV VY P +IA+ + AK
Sbjct: 120 ANYLKNKKTKQVLLVGADVYRPAAINQLQVVGEQIGVEVYAEPENKNPVEIAQNAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ VI+DTAGRL ID+A+M E+ ++ + +NP E L VVD+MTGQ+A FN +
Sbjct: 180 ANGKNTVIIDTAGRLAIDEALMTEISNIHKAVNPQETLFVVDSMTGQDAVNTAKAFNDLL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS+K V KPIK +G GE+ME ++ F+PDRMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIKTVVNKPIKFIGTGEKMEAVDVFHPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE E++ ++QKKI F F+DFL Q + + +MG+M ++GMIPG GK
Sbjct: 300 VSLVERAQEQFDIEESRKLQKKIAKNQFGFDDFLNQIQQIKKMGNMKDLVGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP ER +P+++ S R+KR+A+ SG + +V+QL+ Q
Sbjct: 360 K-DVDIDDDAFKGIEAIINSMTPLERTEPKVINAS--RKKRIAKGSGTSITEVNQLLKQF 416
Query: 503 F 503
F
Sbjct: 417 F 417
>gi|354604239|ref|ZP_09022230.1| signal recognition particle protein [Alistipes indistinctus YIT
12060]
gi|353348006|gb|EHB92280.1| signal recognition particle protein [Alistipes indistinctus YIT
12060]
Length = 444
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/434 (47%), Positives = 292/434 (67%), Gaps = 5/434 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE ++ LKGE +T+ N+ E +++IRRAL++ADV+ V + F V +A+
Sbjct: 1 MFENLTDKLERSFQILKGEGRITEINVAESLKEIRRALIDADVNYKVAKNFTDEVKTKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ V+P Q + KIVRDEL LMGG ++++ + P VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLKSVKPGQMMTKIVRDELAALMGGTMTDITL-EGNPAVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN +K K+G+ +LVAGDVYRPAAI+QL ILG+Q+GV VYT P QIA+ ++ A+
Sbjct: 120 ANLIKSKKGRQVLLVAGDVYRPAAIEQLKILGQQIGVEVYTEEGNQNPVQIAENAIKYAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+++ VIVDTAGRL +D+ MM E+ +K + P E L VVD+MTGQ+A FN +
Sbjct: 180 TNHLNTVIVDTAGRLAVDEQMMQEITAIKAAVKPGETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KP+K + GE+M+ L+ F+P+RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAAISIRAVVNKPLKFISSGEKMDALQVFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQE +E+A ++KK++ FDFNDFL Q + +MG++ + GMIPG+GK+
Sbjct: 300 VSLVEKAQEQYDEEEARRLKKKLVKNQFDFNDFLTQISQIKKMGNLKDLAGMIPGVGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + K EA+I +MTP ER P ++ S RR+R+A SG T Q V++L+ Q
Sbjct: 360 K-NVEINDDVFKQTEAIIHSMTPAERADPSIINGS--RRQRIATGSGTTMQDVNRLLKQF 416
Query: 503 FQMRVRMKNLMGVM 516
R MK++ G M
Sbjct: 417 EDTRKVMKSVAGGM 430
>gi|410098082|ref|ZP_11293063.1| signal recognition particle protein [Parabacteroides goldsteinii
CL02T12C30]
gi|409224172|gb|EKN17107.1| signal recognition particle protein [Parabacteroides goldsteinii
CL02T12C30]
Length = 441
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 290/436 (66%), Gaps = 5/436 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLSERLDRSFKLLKGEGKITEINVAETLKDVRKALLDADVNYKVAKSFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGG ++ + P +IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTSVKPSQLMVKIVHDELASLMGGTAIDINLS-GNPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LK K+ K +L A DVYRPAAI+QL ++GEQVGVPVY P +IA + EA+
Sbjct: 120 ANMLKTKRNKKPLLAACDVYRPAAIEQLRVVGEQVGVPVYMELENKNPVEIAMNAIREAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL ID+ MM E+ +K + P E L VVD+MTGQ+A FN +
Sbjct: 180 AKGNDVVIVDTAGRLAIDEQMMKEIAAIKSAIQPDETLFVVDSMTGQDAVNTAKEFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+M+ L+ F+P+RMA RILGMGD+
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVDKPIKFVGTGEKMDALDTFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF+ Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFISQIQQIKKMGNLKELASMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER P +L S RR+R+A+ SG T Q+V++L+ Q
Sbjct: 360 K-DIDIDDNAFKSIEAIIYSMTPDERVNPAILNGS--RRQRIAKGSGTTIQEVNKLIKQF 416
Query: 503 FQMRVRMKNLMGVMEG 518
+ R M+ L G
Sbjct: 417 DETRKMMRMLTAAKPG 432
>gi|22537142|ref|NP_687993.1| signal recognition particle protein Ffh [Streptococcus agalactiae
2603V/R]
gi|25011071|ref|NP_735466.1| hypothetical protein gbs1017 [Streptococcus agalactiae NEM316]
gi|76787075|ref|YP_329698.1| signal recognition particle protein [Streptococcus agalactiae A909]
gi|76797794|ref|ZP_00780060.1| signal recognition particle protein [Streptococcus agalactiae
18RS21]
gi|77405715|ref|ZP_00782802.1| signal recognition particle protein [Streptococcus agalactiae H36B]
gi|77412008|ref|ZP_00788337.1| signal recognition particle protein [Streptococcus agalactiae
CJB111]
gi|77413611|ref|ZP_00789797.1| signal recognition particle protein [Streptococcus agalactiae 515]
gi|406709443|ref|YP_006764169.1| signal recognition particle protein Ffh [Streptococcus agalactiae
GD201008-001]
gi|424049485|ref|ZP_17787036.1| signal recognition particle protein [Streptococcus agalactiae
ZQ0910]
gi|22534004|gb|AAM99865.1|AE014236_19 signal recognition particle protein Ffh [Streptococcus agalactiae
2603V/R]
gi|23095470|emb|CAD46676.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562132|gb|ABA44716.1| signal recognition particle protein [Streptococcus agalactiae A909]
gi|76586870|gb|EAO63362.1| signal recognition particle protein [Streptococcus agalactiae
18RS21]
gi|77160320|gb|EAO71445.1| signal recognition particle protein [Streptococcus agalactiae 515]
gi|77161964|gb|EAO72946.1| signal recognition particle protein [Streptococcus agalactiae
CJB111]
gi|77175711|gb|EAO78493.1| signal recognition particle protein [Streptococcus agalactiae H36B]
gi|389649156|gb|EIM70641.1| signal recognition particle protein [Streptococcus agalactiae
ZQ0910]
gi|406650328|gb|AFS45729.1| signal recognition particle protein Ffh [Streptococcus agalactiae
GD201008-001]
Length = 521
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 297/439 (67%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL L+G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTDLLGAETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+ + M++A D+YRPAAIDQL LG Q+ VPV+ GT +I +GLE+A++
Sbjct: 123 NKLIKEDNARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTNHSAVEIVTKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID +M EL DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDATLMQELHDVKAIAQPNEILLVVDSMIGQEAANVAEEFNRQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 ISGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +E+A + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIERASQEYDEKRSMELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTPEERE P+LL +P RR+R+A SG T V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNTFVDVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQMMQ---GVMSG 433
>gi|421766745|ref|ZP_16203514.1| Signal recognition particle, subunit Ffh SRP54 [Lactococcus
garvieae DCC43]
gi|407624771|gb|EKF51504.1| Signal recognition particle, subunit Ffh SRP54 [Lactococcus
garvieae DCC43]
Length = 518
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/457 (45%), Positives = 309/457 (67%), Gaps = 17/457 (3%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G++ +T++++ E ++IR ALLEADV+LPVV++F++A+ E+A+G
Sbjct: 3 FENLTERLQNVFKNLRGKKKITEQDVAEITKEIRVALLEADVALPVVKKFIKAIRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ + P QQ++ IV +EL K++GG +EL+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 TEVSEALNPAQQIISIVNEELTKILGGGEAELLKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK+ Q M++A DVYRPAAIDQL LGEQ+ +PVY GT KP I K GL A++
Sbjct: 123 KKLKEEQNARPMMIAADVYRPAAIDQLKTLGEQLDIPVYDEGTAEKPVNIVKNGLARARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL+ID +M+EL+++K + PTE+LLVVDAMTGQ AA + TF+ ++
Sbjct: 183 ERKDYVLIDTAGRLEIDDKLMNELQEIKALAEPTEILLVVDAMTGQVAAQVAKTFDEKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G I+TKLDGD+RGGAALS++E++GKPIK G GE++ DLE FYPDRM+ RILGMGD+L
Sbjct: 243 ISGVIITKLDGDTRGGAALSIREITGKPIKFTGTGEKLTDLETFYPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E + +M +K+ FD++DF+ Q V MG M ++ MIPGM ++
Sbjct: 303 TLIEKAQAQFDEEQSMKMAEKMAENRFDYSDFIDQLDQVTNMGPMEEIMKMIPGMSQMPG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAE-SPVRRKRVAQDSGKTEQQVSQLVAQ 501
+ V+ K + A++ +MTP ER +L AE SP RR+R+A SG + +V++ + Q
Sbjct: 363 IENVKVDPKDIARKRAIVLSMTPAER---QLEAELSPARRRRIAAGSGNSFIEVNKFIKQ 419
Query: 502 LFQMRVRMKNLM-GVME----------GGSLPALSNL 527
Q + M+ +M G M GG +P + N+
Sbjct: 420 FNQSKDMMQGIMNGDMNSMMQQMMGGAGGKMPNMKNM 456
>gi|311068118|ref|YP_003973041.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|419823901|ref|ZP_14347434.1| signal recognition particle protein [Bacillus atrophaeus C89]
gi|310868635|gb|ADP32110.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|388471938|gb|EIM08728.1| signal recognition particle protein [Bacillus atrophaeus C89]
Length = 446
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/436 (47%), Positives = 317/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ +T++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVTEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMQSLTPGQQVIKVVKEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELANVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+L+ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDLINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 EEMKKMMKQMTNMSKG 436
>gi|424787751|ref|ZP_18214515.1| signal recognition particle protein [Streptococcus intermedius BA1]
gi|422113505|gb|EKU17243.1| signal recognition particle protein [Streptococcus intermedius BA1]
Length = 524
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 301/439 (68%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRMALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEAARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVAAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV +++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVCQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKSVMQ---GVMSG 433
>gi|410594507|ref|YP_006951234.1| signal recognition particle protein [Streptococcus agalactiae
SA20-06]
gi|410518146|gb|AFV72290.1| Signal recognition particle protein [Streptococcus agalactiae
SA20-06]
Length = 521
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 296/439 (67%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL L+G E SE+ + PTVI++ GLQG GKTT + KLA
Sbjct: 63 HEIINTLDPTQQIVKIVNEELTDLLGSETSEIEKSPKIPTVIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+ + M++A D+YRPAAIDQL LG Q+ VPV+ GT +I +GLE+A++
Sbjct: 123 NKLIKEDNARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTNYSAVEIVTKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID +M EL DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDATLMQELHDVKAIAQPNEILLVVDSMIGQEAANVAEEFNRQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 ISGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +E+A + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIERASQEYDEKRSMELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTPEERE P LL +P RR+R+A SG T V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPEERENPNLL--NPSRRRRIAAGSGNTFVDVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQIMQ---GVMSG 433
>gi|345866563|ref|ZP_08818589.1| signal recognition particle protein [Bizionia argentinensis JUB59]
gi|344049000|gb|EGV44598.1| signal recognition particle protein [Bizionia argentinensis JUB59]
Length = 442
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 289/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG ++T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFNNLSEKLDKALHVLKGHGSITEVNVAETLKEVRRALLDADVNFKIAKDFTVRVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGGE L + P++IL++GLQG GKTT S KL
Sbjct: 61 GQNVLTTLQPGQLMVKIVKDELTELMGGEAEGLNLTGT-PSIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K+ +LVA DVYRPAA+DQL ++G+Q+GV VY+ P IAK G+ AK
Sbjct: 120 ANFLKTKKTKNPLLVACDVYRPAAVDQLHVVGDQIGVEVYSDKGNTDPVAIAKAGVAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGRL +D+AMM E+ ++ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGHDVVIIDTAGRLAVDEAMMTEISNIHKAIEPQETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDIFYPARMAERILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +++A ++QKKI F F+DFLKQ + + +MG+M +IGMIPG GK
Sbjct: 300 VSLVERAQEQYDEDEARKLQKKIAKNQFGFDDFLKQIQQIKKMGNMKDLIGMIPGAGK-M 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP ER P ++ S R+KR+ + SG + Q+V+QL+ Q
Sbjct: 359 MKDIDIDDDAFKGIEAIIHSMTPLERTSPSVINAS--RKKRIGKGSGTSVQEVNQLLKQF 416
>gi|395801839|ref|ZP_10481094.1| signal recognition particle protein [Flavobacterium sp. F52]
gi|395436028|gb|EJG01967.1| signal recognition particle protein [Flavobacterium sp. F52]
Length = 454
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/421 (48%), Positives = 290/421 (68%), Gaps = 7/421 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ + ++++RRALL+ADV+ + + F V ++A+
Sbjct: 1 MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTARVKDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q LVK+V+DEL +LMGG+V+ + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGVNLS-GNPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA D+YRPAAI+QL I+G+Q+GV VY+ P +IA+ ++ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDIYRPAAINQLHIVGDQIGVEVYSEPENKNPVEIAQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MMDE+ V + + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAVDQEMMDEIARVHKAIQPQETLFVVDSMTGQDAVNTAKAFNDIL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS+K V KPIK VG GE+ME ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAALSIKSVVNKPIKFVGTGEKMEAIDIFYPDRMAERILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFL Q + V +MG+M ++GMIPG K
Sbjct: 300 VSLVERAQEQFDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK-RVAQDSGKTEQQVSQLVAQ 501
V + + K +EA+I +MTP ER KP ++ V+RK R+A+ SG +QV+QL+ Q
Sbjct: 360 K-DVEIEDDAFKHIEAIIYSMTPAERSKPAII---DVKRKARIAKGSGTKVEQVNQLMKQ 415
Query: 502 L 502
Sbjct: 416 F 416
>gi|337281992|ref|YP_004621463.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
gi|335369585|gb|AEH55535.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
Length = 523
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 304/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIVKIVDEELTAILGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+ K+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+A+
Sbjct: 123 NKLVKEEKARPLMIAADIYRPAAIDQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK ++ P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMGELRDVKALVEPNEILLVVDAMIGQEAANVAREFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+GRILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKRSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNLKVDEREIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|182417247|ref|ZP_02948600.1| signal recognition particle protein [Clostridium butyricum 5521]
gi|237668219|ref|ZP_04528203.1| signal recognition particle protein [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378893|gb|EDT76406.1| signal recognition particle protein [Clostridium butyricum 5521]
gi|237656567|gb|EEP54123.1| signal recognition particle protein [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 452
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/417 (46%), Positives = 294/417 (70%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + KLKG+ LT+++I E MR+++ ALLEADV+ VV+ FV VS + VG
Sbjct: 3 FEGLGEKLQETFRKLKGKGKLTEKDIKEAMREVKLALLEADVNYKVVKTFVSNVSSKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMGG S+L + S PTVI+L GLQG GKTT+ KLA
Sbjct: 63 SEVLESLTPGQQVIKIVNEELTNLMGGSESKLSYNSSGPTVIMLVGLQGAGKTTMCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA D+YRPAAI QL ++G+Q+ +PV++ G +V P IAK G+ A+
Sbjct: 123 LNLRKDNKKPLLVACDIYRPAAIKQLEVVGKQIEIPVFSMGDKVSPVDIAKAGIAHARDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++VI+DTAGRL ID+ +M ELKD+K + P+E+LLVVD+MTGQ+A + FN ++ +
Sbjct: 183 GNNIVIIDTAGRLHIDEDLMQELKDIKENVKPSEILLVVDSMTGQDAVNVAENFNNDLDL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K + KPIK VG GE+M D E F+PDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKSIINKPIKYVGLGEKMNDFEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQE + +++A ++ K++++ F+F D+L + ++G +++++ M+PGM ++
Sbjct: 303 LIEKAQEAIDEKEAADLGKRMLNQEFNFEDYLMAMEQMKKLGPLNKILEMMPGMNSKELQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ + E ++ + +A+I +MT +ER P L+A+S R+ R+A+ SG + Q+V++L+
Sbjct: 363 GLDLEKGEVAMNVTKAIIYSMTLKERRNPTLIAKSNSRKIRIAKGSGTSVQEVNKLM 419
>gi|386086552|ref|YP_006002426.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387909791|ref|YP_006340097.1| SRP54, signal recognition particle GTPase protein [Streptococcus
thermophilus MN-ZLW-002]
gi|312278265|gb|ADQ62922.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387574726|gb|AFJ83432.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus MN-ZLW-002]
Length = 520
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 298/437 (68%), Gaps = 7/437 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I + GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVLSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLM-GVME 517
Q + M+ +M G ME
Sbjct: 420 FNQAKQMMQGIMSGDME 436
>gi|319649591|ref|ZP_08003747.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
gi|317398753|gb|EFV79435.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
Length = 450
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/435 (47%), Positives = 311/435 (71%), Gaps = 4/435 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ + + ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQNTIQKIRGKGKINEADVKEMMREVRLALLEADVNFKVVKEFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ + PTVI++ GLQG GKTT + KLA
Sbjct: 63 QEVLKSLTPGQQVIKVVKEELTELMGGEQSKIAVSNRPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK ++ MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKYNRNPMLVAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRL +D+A+MDELK +K + NP E+ LVVDAMTGQ+A + +FN +G
Sbjct: 183 DHHDYVLIDTAGRLHVDEALMDELKQIKELSNPDEIFLVVDAMTGQDAVNVAQSFNDLLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK VG GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRSVTNTPIKFVGLGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + +E A+E+++K+ +A+F F+DFL Q V MG + ++ M+PG KI
Sbjct: 303 SLIEKAQANVDEEKAKELEQKMRTASFTFDDFLDQLGQVRSMGPLDELLKMMPGANKIKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I++MT EE+ PE++ S RRKR+A+ SG+T +V++L+ Q
Sbjct: 363 LNNIQIDEKQITHVEAIIKSMTKEEKTHPEIINAS--RRKRIAKGSGRTVPEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVME 517
M+ MK + G+ +
Sbjct: 421 EDMKKMMKQMAGMQQ 435
>gi|81428329|ref|YP_395329.1| Signal recognition particle protein Ffh [Lactobacillus sakei subsp.
sakei 23K]
gi|78609971|emb|CAI55018.1| Signal recognition particle protein Ffh [Lactobacillus sakei subsp.
sakei 23K]
Length = 478
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 298/446 (66%), Gaps = 10/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ A +KL+ + +T+ ++ + MR+IR ALLEADV+ VV+ F++ V E+A+G
Sbjct: 3 FEGLTERLQGALSKLRRKGKVTEADVNQAMREIRLALLEADVNFKVVKDFIKVVKEKAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ+VKIV +EL K+MG L + PT+I++ GLQG GKTT + KLA
Sbjct: 63 TEVLESLSPAQQIVKIVDEELTKMMGETAVPLNKSPKIPTIIMMVGLQGAGKTTTAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YL K K+ +++A D+YRPAAIDQL +GEQVG PV+ GT+V P +I +QGL +A
Sbjct: 123 TYLIKNEKARPLMIAADIYRPAAIDQLKTVGEQVGAPVFEMGTDVNPVEIVRQGLAQAAL 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+A+M EL D+ + P E LL VDAMTGQ A + FN +
Sbjct: 183 QKNDYVLIDTAGRLQIDEALMQELADINDLARPNETLLTVDAMTGQAAVDVAEGFNSRLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTKLDGD+RGGAALS++ V+GKPIK G+GE++ L+ FYPDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKLDGDTRGGAALSIRAVTGKPIKFTGQGEKLNQLDVFYPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQE ++ A +M +KI +FDFNDFL Q + MG + ++ MIPGM P
Sbjct: 303 SLIEKAQEDYDEQKAVDMAEKIKENSFDFNDFLDQMDQLQNMGPLEDIMKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
++ K + M+A++++MTP+ERE P+LL +P RR+R+A +G+ +V++++ Q
Sbjct: 362 QLKNIKMDPKDMTHMKAIVQSMTPQERENPDLL--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G+ + L
Sbjct: 420 FNQ----SKKMMNQMSKGNFNGMEGL 441
>gi|55820929|ref|YP_139371.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55822851|ref|YP_141292.1| signal recognition particle protein [Streptococcus thermophilus
CNRZ1066]
gi|116627717|ref|YP_820336.1| signal recognition particle [Streptococcus thermophilus LMD-9]
gi|55736914|gb|AAV60556.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55738836|gb|AAV62477.1| signal recognition particle [Streptococcus thermophilus CNRZ1066]
gi|116100994|gb|ABJ66140.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Streptococcus thermophilus LMD-9]
Length = 520
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 298/437 (68%), Gaps = 7/437 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I + GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVLSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLM-GVME 517
Q + M+ +M G ME
Sbjct: 420 FNQAKQMMQGIMSGDME 436
>gi|381337033|ref|YP_005174808.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
gi|356644999|gb|AET30842.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
Length = 491
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 284/428 (66%), Gaps = 6/428 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR+IR ALLEADV+ V++FV V E+A G
Sbjct: 3 FENLTERLSKAIKNLTGRGRVSEEDLRATMREIRLALLEADVNYDTVKKFVANVREKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL MG E L + PT+I++AGLQG GKTT AKLA
Sbjct: 63 TDIMEGLNPAQQIVKIVNDELTATMGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + +L+A D+YRPAAIDQL ILG + +PV+ GT+V P I + GLE+A +
Sbjct: 123 YKLKNENNARPLLIAADIYRPAAIDQLEILGRDLDIPVFAMGTDVNPRDIVRAGLEKAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD+ + +P E+LL VDAMTGQ AA F+ +
Sbjct: 183 NKNDYVFIDTAGRLQIDEELMQELKDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E+ + +K+ FDFNDF+ Q + V MG M ++ MIPGM P
Sbjct: 303 TLIEKAQRDFDEEEQTKQLEKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K +EA++ +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALANVNLNAKQFAHLEAIVGSMTPEERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRM 509
QMR M
Sbjct: 420 FDQMRKMM 427
>gi|422846642|ref|ZP_16893325.1| signal recognition particle protein [Streptococcus sanguinis SK72]
gi|325687450|gb|EGD29471.1| signal recognition particle protein [Streptococcus sanguinis SK72]
Length = 524
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + ++++ + PT+I++ GLQG GKTT + KL
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTADIIKSPKIPTIIMMVGLQGAGKTTFAGKLT 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ +IPGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + A++ +MTP ERE P+LL SP RR+R+A SG + V++ +
Sbjct: 362 ALKNIKVDEKEIARKRAIVSSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|383480060|ref|YP_005388954.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|383493976|ref|YP_005411652.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
gi|378928050|gb|AFC66256.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|378929704|gb|AFC68121.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
Length = 520
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 301/436 (69%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|150006884|ref|YP_001301627.1| signal recognition protein [Parabacteroides distasonis ATCC 8503]
gi|255016084|ref|ZP_05288210.1| putative signal recognition protein [Bacteroides sp. 2_1_7]
gi|256842126|ref|ZP_05547631.1| signal recognition particle protein [Parabacteroides sp. D13]
gi|262384367|ref|ZP_06077502.1| signal recognition particle protein [Bacteroides sp. 2_1_33B]
gi|298377310|ref|ZP_06987263.1| signal recognition particle protein [Bacteroides sp. 3_1_19]
gi|301308707|ref|ZP_07214659.1| signal recognition particle protein [Bacteroides sp. 20_3]
gi|410104961|ref|ZP_11299871.1| signal recognition particle protein [Parabacteroides sp. D25]
gi|423335292|ref|ZP_17313069.1| signal recognition particle protein [Parabacteroides distasonis
CL03T12C09]
gi|423338644|ref|ZP_17316386.1| signal recognition particle protein [Parabacteroides distasonis
CL09T03C24]
gi|149935308|gb|ABR42005.1| putative signal recognition protein [Parabacteroides distasonis
ATCC 8503]
gi|256736442|gb|EEU49771.1| signal recognition particle protein [Parabacteroides sp. D13]
gi|262294070|gb|EEY82003.1| signal recognition particle protein [Bacteroides sp. 2_1_33B]
gi|298265724|gb|EFI07384.1| signal recognition particle protein [Bacteroides sp. 3_1_19]
gi|300833231|gb|EFK63849.1| signal recognition particle protein [Bacteroides sp. 20_3]
gi|409225055|gb|EKN17978.1| signal recognition particle protein [Parabacteroides distasonis
CL03T12C09]
gi|409233181|gb|EKN26021.1| signal recognition particle protein [Parabacteroides sp. D25]
gi|409233609|gb|EKN26444.1| signal recognition particle protein [Parabacteroides distasonis
CL09T03C24]
Length = 445
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/443 (47%), Positives = 295/443 (66%), Gaps = 6/443 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ ++ LKGE +T+ N+ E ++D+R+ALL+ADV+ V + F V E+A+
Sbjct: 1 MFENLSERLDRSFKLLKGEGKITEINVAETLKDVRKALLDADVNYKVAKSFTDTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q +VKIV DEL LMGG + V + P +IL++GLQG GKTT + KL
Sbjct: 61 GQNVLTSVKPSQLMVKIVHDELASLMGGTAVD-VNLQGNPAIILMSGLQGSGKTTFTGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A+ LK K+ K +L A DVYRPAAI+QL ++GEQVGVPVY P +IA + EA+
Sbjct: 120 ASLLKTKKNKKPLLAACDVYRPAAIEQLRVVGEQVGVPVYMELENKNPVEIAMNAIREAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DVVIVDTAGRL ID+ MM+E+ +K + P E L VVDAMTGQ+A FN +
Sbjct: 180 AKGNDVVIVDTAGRLAIDEQMMNEIAAIKSAIQPDETLFVVDAMTGQDAVNTAREFNERL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK VG GE+M+ L+ F+P+RMA RILGMGD+
Sbjct: 240 NFDGVVLTKLDGDTRGGAALSIRTVVDKPIKFVGTGEKMDALDIFHPERMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+ +QKKI FDFNDF+ Q + + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFISQIQQIKKMGNLKELASMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP+ER P +L S RR+R+A+ SG + Q+V++L+ Q
Sbjct: 360 K-DVDIDDNAFKSIEAIIYSMTPDERSNPAILNGS--RRQRIAKGSGTSIQEVNKLIKQF 416
Query: 503 FQMRVRMKNLMGVMEGG-SLPAL 524
+ R M+ L G LP++
Sbjct: 417 DETRKMMRMLTSAKSGKMKLPSM 439
>gi|150025532|ref|YP_001296358.1| Signal recognition particle protein [Flavobacterium psychrophilum
JIP02/86]
gi|149772073|emb|CAL43549.1| Signal recognition particle protein [Flavobacterium psychrophilum
JIP02/86]
Length = 449
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/433 (47%), Positives = 297/433 (68%), Gaps = 7/433 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ + ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFNSLSEKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTAKVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q LVKIV+DEL +LMGG+V+ + + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GADVLTTLQPGQLLVKIVKDELTELMGGDVAGINLSGT-PTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA D+YRPAAI+QL ++G Q+GV VY+ P +IA+ ++ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDIYRPAAINQLHVVGGQIGVEVYSEPENKNPVEIAQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM E+ V + + P E L VVDAMTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAVDEEMMAEISRVHKAIQPQETLFVVDAMTGQDAVNTAKAFNDIL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK VG GE+M+ ++ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMDAIDVFYPERMAERILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++Q+KI F F+DFL Q + V +MG+M ++GMIPG GK
Sbjct: 300 VSLVERAQEQYDEEEARKIQRKIAKNEFGFDDFLSQIQQVKKMGNMKDLVGMIPGAGK-A 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK-RVAQDSGKTEQQVSQLVAQ 501
V + + K +EA+I +MTP ER KP ++ V+RK R+A+ +G+ ++V+QL+ Q
Sbjct: 359 LKDVEIQDDAFKHIEAIIYSMTPTERSKPAII---DVKRKARIAKGAGRKLEEVNQLMKQ 415
Query: 502 LFQMRVRMKNLMG 514
QM MK + G
Sbjct: 416 FDQMSKMMKIMQG 428
>gi|386810918|ref|ZP_10098144.1| signal recognition particle protein [planctomycete KSU-1]
gi|386405642|dbj|GAB61025.1| signal recognition particle protein [planctomycete KSU-1]
Length = 450
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/432 (47%), Positives = 297/432 (68%), Gaps = 6/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF +TS LE ++KL+G+ LT+ NI + + ++R ALLEADV+ VV+ F+Q V+E+AV
Sbjct: 1 MFEAITSSLEGVFSKLRGKGRLTEANIKDGLHEVRLALLEADVNYKVVKDFIQHVTERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I+ V P QQ++KIV DELV+LMG + + F ++ T+I+L GLQG GKTT + KL
Sbjct: 61 GEEVIKSVAPGQQIIKIVHDELVRLMGESDTTIPFRENEQTLIMLVGLQGSGKTTTAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A + +GK +LVA DV RPAAI+QL +LG+Q+ +PVY +P +I K L+ AK+
Sbjct: 121 AKTIASKGKKPLLVAADVQRPAAIEQLKVLGQQLDMPVYFEHNS-QPVKICKNSLQHAKE 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ DV+I DTAGRL ID +M EL+++K L P ++ V D+MTGQ+A F+ ++G
Sbjct: 180 RMNDVIIFDTAGRLHIDDELMSELQEIKEKLKPHQIYFVCDSMTGQDAVNSAKEFDTQLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G ILTKLDGD+RGGAALS++ V+GKPIK VG GE+++ LE F+PDRMA RILGMGDV+
Sbjct: 240 FDGVILTKLDGDTRGGAALSIRAVTGKPIKFVGIGEKLDRLEEFHPDRMASRILGMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KIT 442
S VE+AQ+ + E+A+++ +KI +DFL Q + + +MG + V+GMIPGMG K+
Sbjct: 300 SLVERAQQAIDMEEAQKLSRKIQDDTLSLDDFLMQLQQIRKMGPLKEVLGMIPGMGNKVD 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ EK L+ +EA+I++MT ER P+++ S RR+RVA SG T Q V+QL+ Q
Sbjct: 360 GLNI--DEKQLQKVEAIIKSMTRSERSNPDIVNGS--RRQRVATGSGTTIQDVNQLLKQF 415
Query: 503 FQMRVRMKNLMG 514
M+ MK+ G
Sbjct: 416 KSMKKLMKHFKG 427
>gi|307244407|ref|ZP_07526518.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
gi|306492226|gb|EFM64268.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
Length = 452
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 302/430 (70%), Gaps = 6/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L+ L+ A+ KL+ + LT+ ++ MR+++ ALLEADV+ VV+ FV+ V E+ V
Sbjct: 2 IFEGLSDKLQNAFGKLRSKGKLTEADVKTAMREVKMALLEADVNFKVVKDFVKVVQERCV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P Q +VKIV +EL LMG S+L ++ PTVI++ GLQG GKTT S KL
Sbjct: 62 GEEVLKSLTPGQMVVKIVNEELTALMGDVQSKLTYSPQPPTVIMMVGLQGAGKTTTSGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YLKK GKS +LVA DVYRPAAI QL ++GE++ +PV+ G +V P +IAK+ LE AK
Sbjct: 122 GGYLKKDGKSPLLVACDVYRPAAIKQLQVVGEKLDLPVFAMGDQVSPVEIAKKALEHAKS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ DVVI+DTAGRL +D+ +M ELKD+K +NP E+LLVVD+MTGQ+A + +FN +G
Sbjct: 182 HSNDVVIIDTAGRLHVDEVLMQELKDIKTQVNPQEILLVVDSMTGQDAVNVSESFNEILG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G +LTKLDGD+RGGAALS++ V+ KPIK +G GE++++LEPFYPDRMA RILGMGDVL
Sbjct: 242 IDGVVLTKLDGDTRGGAALSIRAVTQKPIKFIGMGEKLDNLEPFYPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+ + E A+E+ +K+ DF DFL Q V +G + +++ ++PGMG I
Sbjct: 302 SLIEKAESALDMEKAKELGQKLKKNEMDFEDFLMQLEQVQNLGPLDKLLELVPGMGNIK- 360
Query: 444 AQVREAE---KSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
Q+ + + K + +A+I++MT EER P++L S R+KR+A+ SG + Q V++L+
Sbjct: 361 GQIGDLDSKGKEINRTKAIIQSMTLEERRNPQILNAS--RKKRIARGSGTSVQDVNRLIK 418
Query: 501 QLFQMRVRMK 510
Q +M+ MK
Sbjct: 419 QFNEMKKMMK 428
>gi|261416795|ref|YP_003250478.1| signal recognition particle protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|385791625|ref|YP_005822748.1| signal recognition particle protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373251|gb|ACX75996.1| signal recognition particle protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302328200|gb|ADL27401.1| signal recognition particle protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 454
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/430 (46%), Positives = 297/430 (69%), Gaps = 6/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF QLT LE L+G+ LT+EN+ E +R++RRA L ADV+ V R FV++V E+++
Sbjct: 1 MFSQLTDSLENTLKNLRGQGKLTEENVAESLREVRRAFLAADVNFNVTRDFVKSVKEKSM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P QQ+VKI+ DELV +MGGE E+ + P I++ GLQG GKTT + K+
Sbjct: 61 GAEVLNSVTPGQQIVKIIHDELVAVMGGETKEINLSAPSPVGIMMVGLQGSGKTTFAGKI 120
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +++ K+ + +LVA DVYRPAAI QL +LG+ +GVPVY G + P +I K G + AK
Sbjct: 121 ALWMRSKKKRKPLLVAADVYRPAAIKQLQVLGKSIGVPVYDEG-QGNPVEIIKHGYQYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
D+VI DTAGRLQID+ +M EL+ + ++P E+L V DAM GQEA + TF +
Sbjct: 180 DNGFDLVIYDTAGRLQIDEELMQELEKARDAVHPDEILFVADAMIGQEAVNVAETFWNRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
TG L+K+DGD+RGGAALS+K+++G PI +G GE++ +++ F+PDRMA RILGMGDV
Sbjct: 240 NFTGVCLSKMDGDTRGGAALSIKKMTGVPICFIGVGEKLNEIDLFHPDRMASRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VEKAQ+V+ ++DA++++KKI++ FD NDFLKQ RT+ ++G + ++ +IPG+ K+
Sbjct: 300 VSLVEKAQQVIDEKDAKDLKKKILNNTFDLNDFLKQLRTIKKLGRIKDILSLIPGLNKLP 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
Q+ EK L +EA++ +MTP+ER+KP+++ S R+ R+A+ SG +V+ ++ Q
Sbjct: 360 LDQID--EKQLVYVEAVLSSMTPKERKKPQIIDGS--RKARIAKGSGTDAARVNAVLKQY 415
Query: 503 FQMRVRMKNL 512
M+ K +
Sbjct: 416 ESMKEMFKKV 425
>gi|421532644|ref|ZP_15978998.1| signal recognition particle protein [Streptococcus agalactiae
STIR-CD-17]
gi|403642114|gb|EJZ02985.1| signal recognition particle protein [Streptococcus agalactiae
STIR-CD-17]
Length = 521
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 296/439 (67%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL L+G E SE+ + PTVI++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTDLLGSETSEIEKSPKIPTVIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+ + M++A D+YRPAAIDQL LG Q+ VPV+ GT +I +GLE+A++
Sbjct: 123 NKLIKEDNARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTNYSAVEIVTKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID +M EL DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDATLMQELHDVKAIAQPNEILLVVDSMIGQEAANVAEEFNRQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 ISGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +E+A + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIERASQEYDEKRSMELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTPEERE P LL +P RR+R+A SG T V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPEERENPNLL--NPSRRRRIAAGSGNTFVDVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQIMQ---GVMSG 433
>gi|419800021|ref|ZP_14325332.1| signal recognition particle protein [Streptococcus parasanguinis
F0449]
gi|385696390|gb|EIG26878.1| signal recognition particle protein [Streptococcus parasanguinis
F0449]
Length = 523
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIVKIVDEELTAILGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+A+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMGELRDVKALAKPNEILLVVDAMIGQEAANVAREFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+GRILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKRSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 AMKNLKVDEREIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|330717910|ref|ZP_08312510.1| signal recognition particle protein [Leuconostoc fallax KCTC 3537]
Length = 492
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 289/428 (67%), Gaps = 6/428 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR+IR ALLEADV+ V+RFV V +A G
Sbjct: 3 FENLTERLSKAMKNLTGRGRVSEEDLHATMREIRLALLEADVNYGTVKRFVANVRGKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ QQ+VKIV +EL K+MG E L + PT+I++AGLQG GKTT AKLA
Sbjct: 63 ADILEGLDAPQQVVKIVNEELTKMMGDEAVPLNKSPQIPTIIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK++ K+ +L+A D+YRPAAIDQL ILG+ + +PV++ GT+ P I + GLEEAK+
Sbjct: 123 YKLKQENKARPLLIAADIYRPAAIDQLEILGKDLDIPVFSLGTDTDPRDIVRAGLEEAKQ 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD+ + +P E+LL VDAMTGQ A F+ +
Sbjct: 183 HRNDYVFIDTAGRLQIDEVLMQELKDIAEIAHPDEILLTVDAMTGQNATETAKGFSESLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGD+L
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ + AE+ +K+ FDFNDF+ Q + V MG M ++ MIPGM P
Sbjct: 303 TLIEKAQKDFDEAAAEKQLEKLRENTFDFNDFVAQLKQVQNMGPMEDILKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + EK +EA++++MTP ERE P+L+ +P RR+R+A SG+ +V++++ Q
Sbjct: 362 ALANLNVDEKQFIHLEAIVQSMTPAEREDPDLI--NPSRRRRLAAGSGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRM 509
QMR M
Sbjct: 420 FDQMRKMM 427
>gi|423068523|ref|ZP_17057311.1| signal recognition particle protein [Streptococcus intermedius
F0395]
gi|355366778|gb|EHG14495.1| signal recognition particle protein [Streptococcus intermedius
F0395]
Length = 524
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 302/439 (68%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+AK
Sbjct: 123 NKLKKEEAARPLMIAADIYRPAAIDQLKTLGQQIDVPVFSLGTEVPAVEIIRQGLEQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+P+RM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPNRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKSLEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTP ERE P LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKSVMQ---GVMSG 433
>gi|77409211|ref|ZP_00785921.1| signal recognition particle protein [Streptococcus agalactiae COH1]
gi|421147371|ref|ZP_15607061.1| signal recognition particle protein [Streptococcus agalactiae
GB00112]
gi|77172187|gb|EAO75346.1| signal recognition particle protein [Streptococcus agalactiae COH1]
gi|401686049|gb|EJS82039.1| signal recognition particle protein [Streptococcus agalactiae
GB00112]
Length = 521
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 296/439 (67%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL L+G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTDLLGAETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+ + M++A D+YRPAAIDQL LG Q+ VPV+ GT +I +GLE+A++
Sbjct: 123 NKLIKEDNARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTNHSAVEIVTKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID +M EL DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDATLMQELHDVKAIAQPNEILLVVDSMIGQEAANVAEEFNRQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 ISGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +E+A + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIERASQEYDEKRSMELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTPEERE P LL +P RR+R+A SG T V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPEERENPNLL--NPSRRRRIAAGSGNTFVDVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQMMQ---GVMSG 433
>gi|146298009|ref|YP_001192600.1| signal recognition particle protein [Flavobacterium johnsoniae
UW101]
gi|146152427|gb|ABQ03281.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Flavobacterium johnsoniae UW101]
Length = 450
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/421 (48%), Positives = 290/421 (68%), Gaps = 7/421 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ + ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTTKVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q LVK+V+DEL +LMGG+V+ + + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGVNLS-GNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA D+YRPAAI+QL ++G+Q+GV VY+ P +IA+ ++ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVEIAQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MMDE+ V + + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAVDQEMMDEIARVHKAIQPQETLFVVDSMTGQDAVNTAKAFNDIL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK VG GE+ME ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMEAIDVFYPDRMAERILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFL Q + V +MG+M ++GMIPG K
Sbjct: 300 VSLVERAQEQFDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK-RVAQDSGKTEQQVSQLVAQ 501
V + + K +EA+I +MTP ER KP ++ V+RK R+A+ SG +QV+QL+ Q
Sbjct: 360 K-DVEIEDDAFKHIEAIIHSMTPGERSKPAII---DVKRKARIAKGSGTKVEQVNQLMKQ 415
Query: 502 L 502
Sbjct: 416 F 416
>gi|296111749|ref|YP_003622131.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|339490980|ref|YP_004705485.1| signal recognition particle protein [Leuconostoc sp. C2]
gi|295833281|gb|ADG41162.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|338852652|gb|AEJ30862.1| signal recognition particle protein [Leuconostoc sp. C2]
Length = 491
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 289/446 (64%), Gaps = 13/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR+IR ALLEADV+ V++FV V E+A G
Sbjct: 3 FENLTQRLSKAMKNLTGRGRVSEEDLRATMREIRLALLEADVNYDTVKKFVANVREKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL MG E L + PT+I++AGLQG GKTT AKLA
Sbjct: 63 ADILEGLNPAQQIVKIVNDELTATMGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ ++ +L+A DVYRPAAIDQL ILG + +PV+ GTEV P I +QGL +A +
Sbjct: 123 YKLKKESQARPLLIAADVYRPAAIDQLEILGRDLDIPVFQLGTEVNPRDIVRQGLAQAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID +M ELKDV + P E+LL VDAMTGQ AA F+ +
Sbjct: 183 NKNDYVFIDTAGRLQIDDVLMQELKDVAEIAKPDEILLTVDAMTGQNAAETAKGFSASLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E + +K+ FDFNDF+ Q + V MG M ++ MIPGM P
Sbjct: 303 TLIEKAQRDFDEEAQAKQLEKMRENTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K +EA++ +MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALANVNIDAKQFAHLEAIVSSMTPAERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRMK-----NLMGV--MEGGS 520
QMR M N G+ M GG+
Sbjct: 420 FDQMRKMMNQATNGNFGGIDKMMGGA 445
>gi|313885966|ref|ZP_07819704.1| signal recognition particle protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924496|gb|EFR35267.1| signal recognition particle protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 446
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 289/430 (67%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKG+ ++T+ N+ E ++D+RRALL+ADV+ V R F V E+A+
Sbjct: 1 MFENLSERLERSFKILKGQGSITEINVAETLKDVRRALLDADVNYNVARDFTNQVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q +VK+V DEL LMG E + K P +IL++GLQG GKTT S KL
Sbjct: 61 GQDVLTSVNPGQMMVKLVHDELATLMGSEAVAINL-KGSPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LKKQ + +LVA DVYRPAAI QL +LGEQ+GVPVY+ P QIA+ + A+
Sbjct: 120 ANMLKKQEQRKPLLVACDVYRPAAIQQLHVLGEQIGVPVYSEPDSKDPVQIARNAIAHAQ 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
++ +D VI+DTAGRL +D+ MM+E+ +K + P E L VVD+MTGQ+A F+ +
Sbjct: 180 QEGLDTVIIDTAGRLAVDEEMMNEISSIKDAIRPDETLFVVDSMTGQDAVNTAAEFDKRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGDSRGGAALS++ V KPIK VG GE+ME L+ F+P RMA RILGMGD+
Sbjct: 240 DFDGVILTKLDGDSRGGAALSIRSVVNKPIKFVGTGEKMEALQVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ +E+A+ ++ KI FDF+DFL Q + +MG++ ++ MIPG+GK+
Sbjct: 300 VSLVERAQQQYDEEEAKRLEAKIAKNQFDFDDFLAQIAQIKKMGNLKDLVSMIPGVGKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER KP LL S RRKR+A SG + +V++L+ Q
Sbjct: 360 K-DLDISNDAFKGIEAIIYSMTPEERAKPSLLDGS--RRKRIADGSGTSVAEVNRLIQQF 416
Query: 503 FQMRVRMKNL 512
Q+ M+ +
Sbjct: 417 DQVSKVMRKM 426
>gi|339301556|ref|ZP_08650654.1| signal recognition particle protein [Streptococcus agalactiae ATCC
13813]
gi|417005226|ref|ZP_11943819.1| signal recognition particle protein [Streptococcus agalactiae FSL
S3-026]
gi|319745019|gb|EFV97347.1| signal recognition particle protein [Streptococcus agalactiae ATCC
13813]
gi|341577039|gb|EGS27447.1| signal recognition particle protein [Streptococcus agalactiae FSL
S3-026]
Length = 521
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 296/439 (67%), Gaps = 13/439 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL L+G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTDLLGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+ + M++A D+YRPAAIDQL LG Q+ VPV+ GT +I +GLE+A++
Sbjct: 123 NKLIKEDNARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTNHSAVEIVTKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID +M EL DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDATLMQELHDVKAIAQPNEILLVVDSMIGQEAANVAEEFNRQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRMA RILGMGD+L
Sbjct: 243 ISGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +E+A + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIERASQEYDEKRSMELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
A +V E E + K A++ +MTPEERE P LL +P RR+R+A SG T V++ +
Sbjct: 362 AMKNFKVDENEIARK--RAIVSSMTPEERENPNLL--NPSRRRRIAAGSGNTFVDVNKFI 417
Query: 500 AQLFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 418 KDFNQAKQMMQ---GVMSG 433
>gi|423317353|ref|ZP_17295258.1| signal recognition particle protein [Bergeyella zoohelcum ATCC
43767]
gi|405581486|gb|EKB55515.1| signal recognition particle protein [Bergeyella zoohelcum ATCC
43767]
Length = 455
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 286/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A + +KG +T+ N+ E +++IRRAL++ADV+ V + + V ++A+
Sbjct: 1 MFNNLQDKLDKALHNIKGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q + KIV DELV LMGG E + +P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQNVLTSLTPGQLMTKIVHDELVDLMGG-TQEGINLSGKPSVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A++LK K+ K +LVA DVYRPAAI+QL +LGEQ+ VPVYT PS IA+ + AK
Sbjct: 120 AHFLKTKKNKKPLLVACDVYRPAAIEQLKVLGEQIQVPVYTEEGSNNPSTIAENAVNYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVIVDTAGRL +D+ MM+E+K V ++P E L VVD+MTGQ+A FN +
Sbjct: 180 HNSFDVVIVDTAGRLAVDEQMMNEIKTVHHFIHPNETLFVVDSMTGQDAVNTAKAFNDAL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAAL+++ V KPIK + GE+ME L+ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+++ KKI F F+DFL+Q + + RMG+M ++GMIPG+GK
Sbjct: 300 ISLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLQQIQQIKRMGNMKDLMGMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTPEER KP ++ R+ R+A+ SG+ + V+QL+ Q
Sbjct: 360 -KDVDINDDAFKHIEAIIQSMTPEERRKPSIINTQ--RKNRIAKGSGRKIEDVNQLMKQF 416
>gi|188588867|ref|YP_001920590.1| signal recognition particle protein [Clostridium botulinum E3 str.
Alaska E43]
gi|251780688|ref|ZP_04823608.1| signal recognition particle protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188499148|gb|ACD52284.1| signal recognition particle protein [Clostridium botulinum E3 str.
Alaska E43]
gi|243085003|gb|EES50893.1| signal recognition particle protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 452
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/420 (45%), Positives = 296/420 (70%), Gaps = 5/420 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + KLKG+ LT+++I E MR+++ ALLEADV+ VV+ F+ VS + VG
Sbjct: 3 FEGLGEKLQETFRKLKGKGKLTEKDIKEAMREVKLALLEADVNYKVVKGFISTVSSKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMGG S++ ++ S TVI+L GLQG GKTT+ KLA
Sbjct: 63 NEVLESLTPGQQVIKIVNEELTNLMGGSESKINYSSSGTTVIMLVGLQGAGKTTMCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA DVYRPAAI QL I+G+Q+ +PV++ G +V P IAK G+ K
Sbjct: 123 LELRKNNKKPLLVACDVYRPAAIKQLEIVGKQIEIPVFSMGDKVNPVDIAKAGIAHGKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+++I+DTAGRL ID+A+M EL+D+K +NP+E+LLVVD+MTGQ+A + +FN ++ +
Sbjct: 183 GNNIIIIDTAGRLHIDEALMQELQDIKENVNPSEILLVVDSMTGQDAVNVAESFNNDLDV 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
TG ILTKLDGD+RGGAALS++ ++ KPIK +G GE++ D E F+PDRM+ RILGMGDVLS
Sbjct: 243 TGVILTKLDGDTRGGAALSIRNITEKPIKYIGTGEKLSDFEVFHPDRMSSRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ + +++A ++ K++++ F+FND+L + ++G +++++ MIPGM ++
Sbjct: 303 LIEKAQSAIDEKEAADLGKRMLNQEFNFNDYLTAIEQMKKLGPLNKILEMIPGMNSKELQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAE---SPVRRKRVAQDSGKTEQQVSQLV 499
+ + E ++ +++I++MT +ER P LL + R+KR+A+ +G T Q+V++LV
Sbjct: 363 NVDLSKGEDAINKTKSVIQSMTEKERNNPHLLTSGNTASSRKKRIARGAGTTIQEVNKLV 422
>gi|422346384|ref|ZP_16427298.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
gi|373225929|gb|EHP48256.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
Length = 452
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/417 (47%), Positives = 303/417 (72%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L S L+ KLKG+ LT+++I E MR+++ ALLEADV+ VV++F+ V ++ VG
Sbjct: 3 FDGLASKLQDTLKKLKGKGKLTEKDIKEAMREVKLALLEADVNFKVVKKFISNVKDKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV DEL LMG S+L ++ + PTV +L GLQG GKTT++ KLA
Sbjct: 63 EEVLNSLTPGQQVIKIVNDELTTLMGETESKLKYSDNGPTVFMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
+L+K+ K +LVA D+YRPAAI QL ++G+Q+ +PV++ G +VK IAK +E AK
Sbjct: 123 LHLRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVFSMGDKVKAVDIAKAAIEHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +M ELKDVK V NP+E+LLVVDAMTGQ+A + TFN + +
Sbjct: 183 GNNVVIIDTAGRLHIDEDLMQELKDVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+++++ KPIK VG GE+M D+E F+PDRMA RILGMGDVLS
Sbjct: 243 SGIILTKLDGDTRGGAALSIRDITSKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQ+ + Q++A ++ +K+++ F+F+D+L + ++G ++++I MIPG+ ++
Sbjct: 303 LIEKAQQAIDQDEASKLSEKMLNQEFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELE 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ EK + ++A+I++MT +ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 363 GIDFSQGEKQMATVKAIIQSMTAKERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|312865260|ref|ZP_07725488.1| signal recognition particle protein [Streptococcus downei F0415]
gi|311099371|gb|EFQ57587.1| signal recognition particle protein [Streptococcus downei F0415]
Length = 524
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/437 (45%), Positives = 303/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIIKIVNEELTAVLGSETAEIEKSPKIPTIIMMIGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+V ++I K GL +A++
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQISVPVFDMGTDVPATEIVKNGLAQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDETLMQELRDVKELAQPNEILLVVDSMIGQEAANVAREFNQQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV++++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVRQITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQDYDEKRSAEIAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK + A++ +MTPEERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LSNIKVDEKDIARKRAIVSSMTPEERENPDLL--NPSRRRRIASGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLM-GVMEG 518
R K +M GVM G
Sbjct: 421 N----RAKGMMQGVMNG 433
>gi|258647132|ref|ZP_05734601.1| signal recognition particle protein [Prevotella tannerae ATCC
51259]
gi|260853095|gb|EEX72964.1| signal recognition particle protein [Prevotella tannerae ATCC
51259]
Length = 452
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 296/450 (65%), Gaps = 13/450 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKGE +T+ N+ E ++D+RRALL+ADV+ V + F V E+A+
Sbjct: 1 MFDNLSERLERSFKILKGEGRITEINVAETLKDVRRALLDADVNYKVAKSFTDDVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V+P Q LVKIV DEL +LMGG ++ + P V+L++GLQG GKTT+S KL
Sbjct: 61 GQHVLTAVKPGQLLVKIVHDELARLMGGTAADFNI-EGHPAVVLMSGLQGSGKTTMSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +K K+ + +LVA DVYRPAAIDQL LGEQ+ VPVY+ P IA ++EAK
Sbjct: 120 ALMMKTKKRRRPLLVACDVYRPAAIDQLHTLGEQIDVPVYSERDNQDPVSIALNAIKEAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K+ D+VIVDTAGRL ID+ MM E+ +K + P E L VVD+MTGQ+A FN +
Sbjct: 180 AKSYDLVIVDTAGRLAIDEKMMTEIATIKEHIRPNETLFVVDSMTGQDAVNTAKEFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAALS++ V KPIK +G GE++E L+ F+P+RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAALSIRTVVNKPIKFIGTGEKLEALDIFHPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE + +A+ +Q+KI FDF+DFL Q + +MG++ + MIPG+GK
Sbjct: 300 VSLVERAQEQYDEAEAKRLQRKIQKNQFDFDDFLAQIYQIKKMGNLKELASMIPGVGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER+ PE+L S RR R+A+ SG T+Q V++L+ Q
Sbjct: 360 -KNIDIDDDAFKGIEAIILSMTPKERKHPEILNTS--RRMRIAKGSGTTQQDVNRLLKQF 416
Query: 503 FQMRVRMK--------NLMGVMEGGSLPAL 524
Q R MK +M M G +P L
Sbjct: 417 EQTRKMMKMMTGSKMGKMMAQMPKGKMPNL 446
>gi|167630250|ref|YP_001680749.1| signal recognition particle protein [Heliobacterium modesticaldum
Ice1]
gi|167592990|gb|ABZ84738.1| signal recognition particle protein [Heliobacterium modesticaldum
Ice1]
Length = 454
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/424 (48%), Positives = 297/424 (70%), Gaps = 3/424 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ KL+G+ +++ ++ E MR++R ALL ADVSL VV+ FV V E+AV
Sbjct: 1 MFEGLAEKLQNTLKKLRGKGKVSEADVAEAMREVRMALLAADVSLKVVKDFVARVKERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ+VK+V +ELV LMGG S+L + PTV++L GLQG GKTT +KL
Sbjct: 61 GQEVLESLTPGQQVVKVVYEELVALMGGTSSKLTLSPKPPTVVMLVGLQGAGKTTTVSKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L+KQG+ +LVA DVYRPAA+ QL +LG Q+ +PV++ GT V P IAK +E A
Sbjct: 121 GLFLRKQGRRPLLVACDVYRPAAVKQLQVLGNQLDLPVFSMGTGVSPVDIAKGAVEHAVA 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+V++DTAGRL I++ +M+ELK +K + P E+LLVVDAMTGQ+A + +F+ ++G
Sbjct: 181 HGRDMVLLDTAGRLHINEELMEELKSIKSAVRPHEILLVVDAMTGQDAVNVAESFHGQLG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALSVK V+G PIK G GE+ + LE F+PDRMA RILGMGDVL
Sbjct: 241 LDGVILTKLDGDARGGAALSVKAVTGCPIKFAGMGEKPDALEQFHPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + + A++M++++ A F DFL Q + + +MG + +++GM+PGM K+
Sbjct: 301 TLIEKAQASIDAQVAKDMEQRLRKAEFTLEDFLVQIQQMKKMGPLDQLMGMMPGMNKMKA 360
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ +K +K +EA+I +MTPEER P++L +S R++R+A+ SG + QQV+ L+
Sbjct: 361 LKGVQIDDKDMKHVEAIILSMTPEERRNPQILKDS--RKRRIARGSGTSVQQVNNLLKTF 418
Query: 503 FQMR 506
Q R
Sbjct: 419 EQTR 422
>gi|392971839|ref|ZP_10337231.1| signal recognition particle protein Ffh [Staphylococcus equorum
subsp. equorum Mu2]
gi|403046837|ref|ZP_10902306.1| signal recognition particle [Staphylococcus sp. OJ82]
gi|392509552|emb|CCI60521.1| signal recognition particle protein Ffh [Staphylococcus equorum
subsp. equorum Mu2]
gi|402763533|gb|EJX17626.1| signal recognition particle [Staphylococcus sp. OJ82]
Length = 455
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/430 (45%), Positives = 304/430 (70%), Gaps = 4/430 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ K++G+ +T+ +I MR++R ALLEADV+ VV+ FV+ VS++A+G
Sbjct: 3 FEGLSDRLQGTMQKIRGKGKVTEADIKLMMREVRLALLEADVNFKVVKEFVKTVSDRALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++KIV++EL +LMGGE + + A PTV+++ GLQG GKTT + KLA
Sbjct: 63 SDVMKSLTPGQQVIKIVQEELTQLMGGENATIKMANKPPTVVMMVGLQGAGKTTTAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ KK K +LVA D+YRPAAIDQL +G+Q+ +PVY+ G +VKP QI + + AK+
Sbjct: 123 LLMRKKYNKKPLLVAADIYRPAAIDQLQTVGKQIDIPVYSEGDQVKPQQIVENAIAHAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++D VI+DTAGRL +D+A+M EL DVK + P E++LVVDAMTGQ+A + +F+ ++
Sbjct: 183 AHLDFVIIDTAGRLHVDEALMQELSDVKEITKPDEIMLVVDAMTGQDAVNVAESFDSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G LTKLDGD+RGGAALS++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + ++ A++++KK+ +++F DFL+Q V +G + ++ MIPGM K+
Sbjct: 303 SLIEKAQTDVDEDKAKDLEKKMRTSSFTLEDFLEQLDQVKSLGPLDDIMKMIPGMNKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + +K + ++A+I++MTP ER KPE L S R+KR+A+ SG++ Q++++L+ Q
Sbjct: 363 IENMNMDDKQIDHIKAIIQSMTPNERNKPETLNVS--RKKRIAKGSGRSVQEINRLMKQF 420
Query: 503 FQMRVRMKNL 512
M+ MK
Sbjct: 421 TDMKKMMKQF 430
>gi|218887972|ref|YP_002437293.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758926|gb|ACL09825.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 518
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/433 (46%), Positives = 292/433 (67%), Gaps = 4/433 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L + K G L + NI + +R++R ALLEADV+ VVR F++ V E+ +
Sbjct: 1 MFDSLSDRLTGVFRKFTGTGRLDEANIQDGLREVRLALLEADVNFKVVRDFIERVRERCL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ + P QQ+VKIV DELV+L+GG ++L +P VI++ GLQG GKTT SAK+
Sbjct: 61 GQDVLKSLTPAQQVVKIVHDELVELLGGGTTQLDLRGKQPYVIMMVGLQGSGKTTSSAKI 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN L+KQ LV DVYRPAAIDQL L +Q+ +P Y + + P IA +E+A++
Sbjct: 121 ANLLRKQKMRPYLVPADVYRPAAIDQLHTLAKQLDIPAYPSAPGMNPVDIAVAAVEDARE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K +VVIVDTAGRL ID+ +M EL +K + P E+L V DAMTGQ+A + +FN +
Sbjct: 181 KQCNVVIVDTAGRLHIDETLMQELVSIKGRVEPQEILFVADAMTGQDAVTVAESFNTALD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G +LTK+DGD+RGGAALS++ V+GKP+K VG GE++ D+E F+PDR+AGRILGMGD++
Sbjct: 241 ISGVVLTKMDGDARGGAALSIRSVTGKPVKFVGMGEKLSDIEVFHPDRVAGRILGMGDMM 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ ++ E+AEE+ +K A FD DF Q R + ++GS+ ++ +IPGMG +
Sbjct: 301 TLIEKAQSTIKAEEAEELGRKFQKAEFDLEDFRTQMRRLKKLGSLEGILKLIPGMGALRE 360
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
++ EK + +EA+I +MT +ER P++L S RR+R+A SG T Q V+QL+
Sbjct: 361 KLGEMNVPEKEMGRVEAIINSMTMQERRNPKVLNGS--RRQRIAMGSGTTVQDVNQLINN 418
Query: 502 LFQMRVRMKNLMG 514
QMR MK +MG
Sbjct: 419 FEQMRGMMKKVMG 431
>gi|347532240|ref|YP_004839003.1| signal recognition particle protein [Roseburia hominis A2-183]
gi|345502388|gb|AEN97071.1| signal recognition particle protein [Roseburia hominis A2-183]
Length = 452
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 301/440 (68%), Gaps = 7/440 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + L+ + LT+ ++ +++++ ALLEADV+ VV++FV+ V E+AVG
Sbjct: 3 FDSLSEKLQNVFKNLRSKGRLTEADVKTALKEVKMALLEADVNFKVVKQFVKDVEERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKL 203
++ G+ P Q ++KIV +E+VKLMG E +E+ + TVI++ GLQG GKTT +AKL
Sbjct: 63 QDVMNGLNPGQMVIKIVNEEMVKLMGSETAEITLQPGKAVTVIMMTGLQGAGKTTTAAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A K++GK +LVAGDVYRPAAI+QL I G++ GV V++ G + P IAK +E A K
Sbjct: 123 AGKFKQKGKKVLLVAGDVYRPAAIEQLQINGQKQGVEVFSMGDKNSPVNIAKAAMEHAAK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ ++VI+DTAGRL ID+ MM EL +K + + +LVVDAMTGQ+A + TF+ IG
Sbjct: 183 NDFNIVIIDTAGRLHIDEDMMAELIQIKENVTVHQTVLVVDAMTGQDAVNVAKTFDERIG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G ILTKLDGD+RGGAALS++ V+GKPI G GE++ DLE FYPDRMA RILGMGDVL
Sbjct: 243 IDGVILTKLDGDTRGGAALSIRAVTGKPIFYAGMGEKLSDLEQFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM----G 439
+ +EKAQE +E A+++++K+ FDF +L+ + +MG +S ++GM+PG+ G
Sbjct: 303 TLIEKAQEDFDEERAKKIEQKMRKNEFDFEMYLESMSQMKKMGGLSSILGMMPGLGMGAG 362
Query: 440 KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
K+ AEKSL EA+I +MTPEER+ P LL +P R++R+A +G +V++LV
Sbjct: 363 KMPDIDEAAAEKSLSRTEAIIYSMTPEERQNPSLL--NPSRKRRIAVGAGVDIAEVNRLV 420
Query: 500 AQLFQMRVRMKNLMGVMEGG 519
Q QM+ MK + G+M+ G
Sbjct: 421 KQFEQMKKMMKQMPGMMKKG 440
>gi|251782371|ref|YP_002996673.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391000|dbj|BAH81459.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 522
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|209559470|ref|YP_002285942.1| signal recognition particle subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
gi|209540671|gb|ACI61247.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
Length = 520
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FENLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEEDARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANIAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|311746104|ref|ZP_07719889.1| signal recognition particle protein [Algoriphagus sp. PR1]
gi|126576323|gb|EAZ80601.1| signal recognition particle protein [Algoriphagus sp. PR1]
Length = 444
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/457 (45%), Positives = 302/457 (66%), Gaps = 15/457 (3%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A+ LKG T+T+ N+ +++IRRAL++ADV+ V + + ++A+
Sbjct: 1 MFDNLSFKLDRAFKTLKGTGTITEINVATTVKEIRRALIDADVNYKVAKEVTDKIKQEAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q LVKI ++EL KLMGG E+ + P+V+L++GLQG GKTT S KL
Sbjct: 61 GRDVLISVSPGQLLVKITQEELTKLMGGTKVEINLS-GDPSVVLISGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A+ LKKQG+ +LVA D+YRPAAIDQL +LGEQVGV VY +IA + AKK
Sbjct: 120 ASLLKKQGRQVLLVACDIYRPAAIDQLKVLGEQVGVEVYAEPENKNALEIANNAIAYAKK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VIVDTAGRL +D+ MM E++ +K+ LNP+E L VVD+MTGQ+A TF+ +
Sbjct: 180 SGKKTVIVDTAGRLAVDEQMMQEIEALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGD+RGGAA+S++ V KPIK + GE+ME+++ F+PDRM+ RILGMGDV+
Sbjct: 240 FNGVVLTKLDGDTRGGAAISIRHVVNKPIKFISTGEKMENIDVFHPDRMSQRILGMGDVI 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +++A+ + KI NF+F+DFL Q V +MG++ ++GMIPGMGK
Sbjct: 300 SLVERAQQSFDEDEAKRINAKIRQNNFNFDDFLSQLEQVKKMGNIKDLMGMIPGMGKAMK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + S K +EA+I++MTP+ER +P+++ S RRKR+A SG+T +V+ L+ Q
Sbjct: 360 G-LDIDDDSFKPIEAIIKSMTPKERHQPDIIDGS--RRKRIANGSGRTITEVNNLMKQFS 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 540
MR MK + + GG+ A+S L PPG
Sbjct: 417 DMRKMMKQMNKM--GGAKAAMSKL---------MPPG 442
>gi|238852592|ref|ZP_04643002.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
gi|238834738|gb|EEQ26965.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
Length = 476
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 301/446 (67%), Gaps = 11/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A L G+ +++ +I + R+IR ALLEADV+ VV+ F++ + ++A+G
Sbjct: 3 FENLSERLQKALKNLTGKGKISEADINDASREIRLALLEADVNFKVVKDFIKKIKKEALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ + P QQ++KIV DEL K+MG E L ++ PT+I++ GLQG GKTT KLA
Sbjct: 63 KEVQESLNPGQQIIKIVDDELTKMMGEEAVSLNKSQHIPTIIMMVGLQGTGKTTTVGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYL K K+ +L+AGD+YRPAAIDQL +G+Q+ VPVY+ + ++I K GLEEA K
Sbjct: 123 NYLMKNEKARPLLIAGDIYRPAAIDQLKQIGQQLNVPVYSEDNQ-NVAEIVKHGLEEADK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRL+ID+ +MDELK V V +P LLVVDAMTGQ A + FN ++
Sbjct: 182 NKNDYVLIDTAGRLEIDEQLMDELKRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLD 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L
Sbjct: 242 LTGIILTKLDGDTRGGAALSIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDML 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++AE+M +K+ FDFNDF+ Q V +MG + ++I MIPG+G P
Sbjct: 302 TLIEKAQQDYDAKEAEKMAEKMRENTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NP 360
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + ++A++ +MTPEERE P++L +P RR+R+A SG++ +V++++ Q
Sbjct: 361 ALKNIQIPEKQISHLKAIVYSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQ 418
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G + +NL
Sbjct: 419 FKQ----SKEMMQKMTKGDMGEFANL 440
>gi|332299387|ref|YP_004441308.1| signal recognition particle protein [Porphyromonas asaccharolytica
DSM 20707]
gi|332176450|gb|AEE12140.1| signal recognition particle protein [Porphyromonas asaccharolytica
DSM 20707]
Length = 446
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 289/430 (67%), Gaps = 5/430 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ LE ++ LKG+ ++T+ N+ E ++D+RRALL+ADV+ V R F V E+A+
Sbjct: 1 MFENLSERLERSFKILKGQGSITEINVAETLKDVRRALLDADVNYNVARDFTNQVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q +VK+V DEL LMG E + K P +IL++GLQG GKTT S KL
Sbjct: 61 GQDVLTSVNPGQMMVKLVHDELATLMGSEAVAINL-KGSPAIILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN LKKQ + +LVA DVYRPAAI QL +LGEQ+GVPVY+ P QIA+ + A+
Sbjct: 120 ANMLKKQEQRKPLLVACDVYRPAAIQQLHVLGEQIGVPVYSEPDSKDPVQIARNAIAHAQ 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
++ +D VI+DTAGRL +D+ MM+E+ +K + P E L VVD+MTGQ+A F+ +
Sbjct: 180 QEGLDTVIIDTAGRLAVDEEMMNEISSIKDAIRPDETLFVVDSMTGQDAVNTAAEFDKRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGDSRGGAALS++ V KPIK VG GE+ME L+ F+P RMA RILGMGD+
Sbjct: 240 DFDGVILTKLDGDSRGGAALSIRSVVNKPIKFVGTGEKMEALQVFHPSRMADRILGMGDI 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ+ +E+A+ ++ KI FDF+DFL Q + +MG++ ++ MIPG+GK+
Sbjct: 300 VSLVERAQQQYDEEEAKRLEAKIAKNQFDFDDFLAQIAQIKKMGNLKDLVSMIPGVGKMV 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTPEER KP LL S RRKR+A SG + +V++L+ Q
Sbjct: 360 K-DLDISNDAFKGIEAIIYSMTPEERAKPSLLDGS--RRKRIADGSGTSVAEVNRLIQQF 416
Query: 503 FQMRVRMKNL 512
Q+ M+ +
Sbjct: 417 DQVSKVMRKM 426
>gi|227432057|ref|ZP_03914071.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352174|gb|EEJ42386.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 491
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 284/428 (66%), Gaps = 6/428 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR IR ALLEADV+ V++FV V E+A G
Sbjct: 3 FENLTERLSKAIKNLTGRGRVSEEDLRATMRGIRLALLEADVNYDTVKKFVANVREKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL MG E L + PT+I++AGLQG GKTT AKLA
Sbjct: 63 TDIMEGLNPAQQIVKIVNDELTATMGEEAVPLNKSPKIPTIIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LK + + +L+A D+YRPAAIDQL ILG + +PV++ GT+V P I + GLE+A +
Sbjct: 123 YKLKNENNARPLLIAADIYRPAAIDQLEILGRDLDIPVFSMGTDVNPRDIVRAGLEKAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID+ +M ELKD+ + +P E+LL VDAMTGQ AA F+ +
Sbjct: 183 NKNDYVFIDTAGRLQIDEELMQELKDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E+ + +K+ FDFNDF+ Q + V MG M ++ MIPGM P
Sbjct: 303 TLIEKAQRDFDEEEQTKQLEKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K +EA++ +MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALANVNLDAKQFAHLEAIVGSMTPEERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQ 419
Query: 502 LFQMRVRM 509
QMR M
Sbjct: 420 FDQMRKMM 427
>gi|86141178|ref|ZP_01059724.1| signal recognition particle protein [Leeuwenhoekiella blandensis
MED217]
gi|85831737|gb|EAQ50192.1| signal recognition particle protein [Leeuwenhoekiella blandensis
MED217]
Length = 442
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/420 (47%), Positives = 289/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E +++IRRAL++ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDKAMHVLKGHGQITEVNVAETLKEIRRALVDADVNYKIAKDFTNTVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q + K+V+DEL +LMGGE +E + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQDVLTALKPGQLMTKLVKDELTELMGGE-AEGINLSGNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAIDQL ++G+Q+GV V++ E P +I++ + AK
Sbjct: 120 ANFLKNKKTKKPLLVACDVYRPAAIDQLHVVGDQIGVEVFSNKEEKDPVKISEAAIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ VI+DTAGRL +D+AMM+E+ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGFNAVIIDTAGRLAVDQAMMNEIAAIHEAIKPQETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAALS+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAALSIKTVVDKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFLKQ + + +MG+M +IGMIPG GK
Sbjct: 300 VSLVERAQEQFDEEEARKLQKKIAKNQFGFDDFLKQIQQIKKMGNMKDLIGMIPGAGKAL 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MTP+ER +P ++ S R+KR+++ SG + Q+V+QL+ Q
Sbjct: 360 KG-LDIDDDAFKGIEAIIHSMTPDERTQPSIINSS--RKKRISKGSGTSVQEVNQLLKQF 416
>gi|408401624|ref|YP_006859587.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407967852|dbj|BAM61090.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 522
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|422758876|ref|ZP_16812638.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322411711|gb|EFY02619.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 520
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKYTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANMKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|386316967|ref|YP_006013131.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|410494699|ref|YP_006904545.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
gi|417927774|ref|ZP_12571162.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|323127254|gb|ADX24551.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|340765648|gb|EGR88174.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|410439859|emb|CCI62487.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
Length = 520
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|381209995|ref|ZP_09917066.1| signal recognition particle protein [Lentibacillus sp. Grbi]
Length = 447
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/438 (45%), Positives = 311/438 (71%), Gaps = 8/438 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L++ K+ G+ ++++++ E R++R ALLEADV+ VV+ ++ + E+AVG
Sbjct: 3 FEGLADRLQSTMKKITGKGKVSEQDVKEMTREVRLALLEADVNFKVVKDLIKRIKERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++K+V++EL +LMGGE S++ + PTVI++AGLQG GKTT S KLA
Sbjct: 63 QEVMESLTPGQQVIKVVKEELSELMGGEQSKIAVSDRPPTVIMMAGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
++L KK + +LVA D+YRPAAIDQL +G Q+G+PV++ GT+ P IAK+ +E+AK+
Sbjct: 123 SHLRKKHNRKPLLVAADIYRPAAIDQLETVGHQLGMPVFSKGTDANPVDIAKEAVEQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL +D+ +M EL+ +K +NP E+ LVVDAMTGQ+A + +FN ++
Sbjct: 183 EHNDYVIIDTAGRLHVDEDLMGELEQIKAAVNPDEIFLVVDAMTGQDAVNVAESFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G +LTKLDGD+RGGAALS++ V+G PIK G GE+++ LEPF P+ MA RILGMGDVL
Sbjct: 243 LSGVVLTKLDGDTRGGAALSIRAVTGTPIKFAGMGEKLDQLEPFRPESMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--- 440
S ++KA+ + ++ A+E+++K+ + +F F+DFL+Q V +MG + ++ MIPG K
Sbjct: 303 SLIDKAETNVNEQQAKELEEKMRTMSFTFDDFLEQMGQVKKMGPLEDLMNMIPGANKMKG 362
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
+ AQ+ EK L +EA+I++MT +ER+ P L+ S R+KR+A+ SG + QV++L+
Sbjct: 363 LKNAQID--EKQLVYVEAIIQSMTKDERQDPSLMNAS--RKKRIAKGSGTSVSQVNRLLK 418
Query: 501 QLFQMRVRMKNLMGVMEG 518
Q +M+ MK + + +G
Sbjct: 419 QFNEMKKMMKQMTNMQKG 436
>gi|94994460|ref|YP_602558.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
gi|94547968|gb|ABF38014.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
Length = 522
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKFDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|417753165|ref|ZP_12401305.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|333770647|gb|EGL47657.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
Length = 520
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHLAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVKVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|332524016|ref|ZP_08400268.1| signal recognition particle protein [Streptococcus porcinus str.
Jelinkova 176]
gi|332315280|gb|EGJ28265.1| signal recognition particle protein [Streptococcus porcinus str.
Jelinkova 176]
Length = 517
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 296/436 (67%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E + + A PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTGILGSETATIEKAPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I +QGL AK+
Sbjct: 123 NKLIKEEDARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVEIVRQGLSLAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+DVK + NP E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASHEYDEQKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ EK + A++ +MT ERE P+LL +P RR+R+A SG + V++ +
Sbjct: 363 LANIKIDEKQIARKRAIVSSMTKAERENPDLL--NPSRRRRIAAGSGNSFVDVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKAMMQ---GVMSG 433
>gi|440751304|ref|ZP_20930538.1| Signal recognition particle, subunit Ffh SRP54 [Mariniradius
saccharolyticus AK6]
gi|436480168|gb|ELP36425.1| Signal recognition particle, subunit Ffh SRP54 [Mariniradius
saccharolyticus AK6]
Length = 445
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 297/446 (66%), Gaps = 9/446 (2%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+S L+ A+ LKG +T+ N+ +++IRRAL++ADV+ V + + EQA+
Sbjct: 1 MFDNLSSKLDRAFKTLKGTGKITEINVATTVKEIRRALIDADVNYKVAKEVTDTIKEQAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q LVKI ++EL KLMGG ++ K P VIL++GLQG GKTT + KL
Sbjct: 61 GRDVLIAVSPGQLLVKITQEELTKLMGGSKVDINI-KGDPAVILISGLQGSGKTTFTGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A+ LKKQG+ +L A D+YRPAAIDQL +LGEQVGV VY QIA + +E AKK
Sbjct: 120 ASLLKKQGRQVLLAACDIYRPAAIDQLKVLGEQVGVEVYAEPENKNALQIASRAIEHAKK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VIVDTAGRL +D+ MM E++ +K+ LNP+E L VVD+MTGQ+A TF+ +
Sbjct: 180 TGKKIVIVDTAGRLAVDEQMMQEIEALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLN 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGD+RGGAA+S++ V KPIK + GE+ME+++ F+PDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDTRGGAAISIRHVVNKPIKFISTGEKMENIDVFHPDRMAQRILGMGDVI 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +E+A+ + KI F+F+DFL Q V +MG++ ++GMIPGM K+
Sbjct: 300 SLVERAQQSFDEEEAKRINAKIRKNQFNFDDFLSQLEQVKKMGNIKDLMGMIPGMNKMMK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ + S K +EA+I +MTP+ERE P+++ S RRKR+A SG+ +V+ L+ Q
Sbjct: 360 G-LDIDDDSFKPIEAIIRSMTPKERENPDIIDGS--RRKRLAAGSGRNITEVNNLMKQFD 416
Query: 504 QMRVRMK--NLMGVME---GGSLPAL 524
MR MK N MG + GG +P +
Sbjct: 417 DMRKLMKQMNKMGGAQKALGGMMPKM 442
>gi|71903552|ref|YP_280355.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
gi|71802647|gb|AAX72000.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
Length = 522
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|284039605|ref|YP_003389535.1| signal recognition particle protein [Spirosoma linguale DSM 74]
gi|283818898|gb|ADB40736.1| signal recognition particle protein [Spirosoma linguale DSM 74]
Length = 439
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 290/438 (66%), Gaps = 4/438 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L A LKG+ +T+ N+ ++++RRAL +ADV+ V + + ++A+
Sbjct: 1 MFENLQDKLNKAIKTLKGQGRITEINVAATIKEVRRALTDADVNYKVAKDITDRIRDKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
++ V P Q VKIV++EL +LMGGE + K P +IL+AGLQG GKTT S KL
Sbjct: 61 DRKVLISVEPGQLFVKIVQEELTELMGGEAQNINI-KGDPAIILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A+YLKKQG++ +LVA D+YRPAAIDQL +LGEQVGV VY QIA+ + A+K
Sbjct: 120 ASYLKKQGRNVLLVAADIYRPAAIDQLKVLGEQVGVEVYAEPENKNAVQIAQNAIALARK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+VIVDTAGRL +D+AMM E++ +KR + P+E L VVD+MTGQ+A TFN +
Sbjct: 180 TGKKIVIVDTAGRLAVDEAMMQEIEALKRAIAPSETLFVVDSMTGQDAVNTAKTFNERLN 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGD+RGGAALS+K V KPIK + GE+ME L+ FYPDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDARGGAALSIKTVVNKPIKFISTGEKMEALDVFYPDRMASRILGMGDVI 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VE+AQ+ +++A+ + K+ FDF+DFL Q + + +MG++ ++GMIPGMGK+
Sbjct: 300 SLVERAQQAFDEDEAKRINAKMRKNQFDFDDFLSQLQQIKKMGNVKDLLGMIPGMGKMIK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ S K +EA+I +MTP+ER +P+++ S R+KR+A SG + QV+ L+ Q
Sbjct: 360 -DLDIDNDSFKPIEAIISSMTPKERSRPDIIDGS--RKKRIATGSGTSITQVNNLLKQFD 416
Query: 504 QMRVRMKNLMGVMEGGSL 521
+MR MK + + G L
Sbjct: 417 EMRKMMKKMNTMQSSGKL 434
>gi|94544046|gb|ABF34094.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10270]
Length = 522
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|312862888|ref|ZP_07723128.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322516902|ref|ZP_08069799.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
gi|311101748|gb|EFQ59951.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322124525|gb|EFX96007.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
Length = 520
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 296/437 (67%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++ D+YRPAAIDQL LG+Q+ VPV+ GTE +I + GLE+A+
Sbjct: 123 NKLIKEQEARPMMIGADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMQELRDIKGFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|402574098|ref|YP_006623441.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
gi|402255295|gb|AFQ45570.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
Length = 452
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 297/429 (69%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ + +LKG+ L + ++ E MR++R ALLEADV+ VV+ FV V E+++
Sbjct: 1 MFQGLSEKLQETFKRLKGKGKLKEADVNEAMREVRVALLEADVNFKVVKDFVAKVKERSI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q ++K+V +E++ LMGG +++ A PTVI+L GLQG GKTT +AKL
Sbjct: 61 GQEVLESLSPAQHVIKVVHEEMIDLMGGASGKILIASKPPTVIMLVGLQGAGKTTHAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN LKKQGK +LVA D+YRPAAI QL +LG Q+ VPV++ G E P IAK + A +
Sbjct: 121 ANMLKKQGKHPLLVACDIYRPAAIKQLQVLGAQLNVPVFSMGEE-NPRDIAKASITHANQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVVI+DTAGRL I++ +M EL+D+K + P E+LLVVDAMTGQ+A + +F+ ++G
Sbjct: 180 NGQDVVIIDTAGRLHINEELMGELRDIKGSVKPHEILLVVDAMTGQDAVNVAESFHGDLG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G ILTKLDGD+RGGAALS+K V+G IK +G GE+M+ LE F+PDRMA RILGMGDVL
Sbjct: 240 LDGVILTKLDGDTRGGAALSIKAVTGCTIKFIGLGEKMDALEAFHPDRMASRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQE ++ A+EM++K+ F +DFL Q + + +MG +S ++ MIPG+GK
Sbjct: 300 TLIEKAQESFDEKKAKEMEQKLRKQEFTLDDFLDQMQQMKKMGPLSSILEMIPGVGK-QL 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V EK +EA+I +MT EER KP ++ +S R+KR+A+ SG + Q V +L+ Q
Sbjct: 359 KDVNIDEKDTAHIEAIIRSMTTEERRKPAIIKDS--RKKRIAKGSGTSVQDVGRLLKQFE 416
Query: 504 QMRVRMKNL 512
QM+ MK
Sbjct: 417 QMQKMMKQF 425
>gi|343083145|ref|YP_004772440.1| signal recognition particle protein [Cyclobacterium marinum DSM
745]
gi|342351679|gb|AEL24209.1| signal recognition particle protein [Cyclobacterium marinum DSM
745]
Length = 445
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/444 (47%), Positives = 293/444 (65%), Gaps = 6/444 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A+ LKG +T+ N+ +++IRRAL++ADV+ V + + E+A+
Sbjct: 1 MFDNLSFKLDRAFKTLKGTGKITEINVATTVKEIRRALIDADVNYKVAKEVTDKIKEEAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ V P Q LVKI ++EL +LMGG E+ K P+V+L++GLQG GKTT S KL
Sbjct: 61 GRDVLIAVSPGQLLVKITQEELTQLMGGAKEEINL-KGDPSVVLISGLQGSGKTTFSGKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
YLKKQG+ +LVA D+YRPAAI+QL LGEQ+G+ VY +IA +E AKK
Sbjct: 120 GTYLKKQGRQVLLVACDIYRPAAIEQLKTLGEQIGIEVYAEPGNQNALEIASNAIEYAKK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VIVDTAGRL +D+ MMDE+ +K+ LNP+E L VVD+MTGQ+A TF+ +
Sbjct: 180 SGKKTVIVDTAGRLAVDEVMMDEISALKQSLNPSETLFVVDSMTGQDAVNTAKTFDERLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
G +LTKLDGDSRGGAA+S++ V KPIK + GE+ME+L+ FYPDRMA RILGMGDV+
Sbjct: 240 FDGVVLTKLDGDSRGGAAISIRHVVNKPIKFISTGEKMENLDLFYPDRMAQRILGMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKAQ+ +++A+ + KI FDF+DFL Q + +MG++ ++GMIPGMGK
Sbjct: 300 SLVEKAQQSFDEDEAKRLNAKIRKNQFDFDDFLSQLDQIKKMGNIKDLLGMIPGMGKAIK 359
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ E + I EA+I +MTP+ER P ++ S RR+R+A+ SG+T Q+V+ L+ Q
Sbjct: 360 GLDIDDESFIPI-EAIIRSMTPDERGNPSIIDGS--RRRRIAKGSGRTIQEVNNLMKQFA 416
Query: 504 QMRVRMKNLMGVMEGGSLPALSNL 527
MR MK + + GG+ AL L
Sbjct: 417 DMRKMMKQMNKM--GGAQKALGAL 438
>gi|21910377|ref|NP_664645.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
gi|21904574|gb|AAM79448.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
Length = 520
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|395453961|dbj|BAM30300.1| signal recognition particle subunit [Streptococcus pyogenes M1 476]
Length = 529
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|339641142|ref|ZP_08662586.1| signal recognition particle protein [Streptococcus sp. oral taxon
056 str. F0418]
gi|339454411|gb|EGP67026.1| signal recognition particle protein [Streptococcus sp. oral taxon
056 str. F0418]
Length = 524
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/470 (44%), Positives = 310/470 (65%), Gaps = 26/470 (5%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+ LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGL +AK
Sbjct: 123 HKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLGQAKA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL DVK + NP E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 MTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + EM +K+ FDFNDF+ Q V MG M +I M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLEMAEKMRENTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAS-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A + E+ + A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 362 ALKNFKVDEREIARKRAIVSSMTPEERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKD 419
Query: 502 LFQMRVRMKNLM-GVME-------------------GGSLPALSNLEDAL 531
Q + M+ ++ G M GG++P +S L+D +
Sbjct: 420 FNQSKQLMQGVLSGDMSKMMKQMGLNPNNMPKNMPGGGAMPDMSALQDMM 469
>gi|28895953|ref|NP_802303.1| signal recognition particle [Streptococcus pyogenes SSI-1]
gi|28811203|dbj|BAC64136.1| putative signal recognition particle [Streptococcus pyogenes SSI-1]
Length = 522
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|65321173|ref|ZP_00394132.1| COG0541: Signal recognition particle GTPase [Bacillus anthracis
str. A2012]
Length = 464
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/419 (48%), Positives = 300/419 (71%), Gaps = 8/419 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAIANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAG L ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGHLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI-- 441
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 442 -TPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
AQV EK + +EA+I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 363 LKNAQVD--EKQIGHIEAIIRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQKINRLI 417
>gi|390947948|ref|YP_006411708.1| signal recognition particle subunit FFH/SRP54 (srp54) [Alistipes
finegoldii DSM 17242]
gi|390424517|gb|AFL79023.1| signal recognition particle subunit FFH/SRP54 (srp54) [Alistipes
finegoldii DSM 17242]
Length = 441
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/432 (47%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT LE ++ LKGE +T+ NI E +++IRRAL++ADV+ V + F V ++A+
Sbjct: 1 MFENLTDKLERSFKILKGEGRITEINIAETLKEIRRALIDADVNYKVAKSFTDEVKQKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ V+P Q + KIVRDEL LMGG +++ + P VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLKAVKPGQMMTKIVRDELALLMGGTATDIRL-EGNPAVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A+++K K+G+ +LVAGDVYRPAAIDQL +LG Q+GV VYT P QIA+ ++ A+
Sbjct: 120 ASFIKSKKGRQVLLVAGDVYRPAAIDQLKVLGGQIGVEVYTEEGSKDPVQIAENAIKYAR 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVIVDTAGRL +D+AMM E+ +K + P+E L VVDAMTGQ+A FN +
Sbjct: 180 QHAFNVVIVDTAGRLAVDEAMMQEITAIKTAVKPSETLFVVDAMTGQDAVNTAREFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAA+S++ V KP+K + GE+M+ L+ F+P+RMA RILGMGDV
Sbjct: 240 DFDGVVLTKLDGDTRGGAAISIRSVVNKPLKFISSGEKMDALQVFHPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A +++KK++ F+FNDF+ Q + + +MG++ + M+PGMGK+
Sbjct: 300 VSLVERAQEQFDEEEARKLKKKLVKNQFNFNDFIGQIQQIKKMGNLKDLASMLPGMGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + K EA+I +MTP ERE+PE++ + RR+R+A+ SG T V++L+ Q
Sbjct: 360 K-NVDIPDDVFKQTEAIISSMTPAERERPEII--NARRRERIAKGSGTTMADVNRLMKQF 416
Query: 503 FQMRVRMKNLMG 514
R MK + G
Sbjct: 417 EDTRKMMKAVAG 428
>gi|312866548|ref|ZP_07726763.1| signal recognition particle protein [Streptococcus parasanguinis
F0405]
gi|311097847|gb|EFQ56076.1| signal recognition particle protein [Streptococcus parasanguinis
F0405]
Length = 518
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIVKIVDEELTAILGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+A+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMGELRDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+GRILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKRSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNLKVDEREIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|126662097|ref|ZP_01733096.1| signal recognition particle protein [Flavobacteria bacterium BAL38]
gi|126625476|gb|EAZ96165.1| signal recognition particle protein [Flavobacteria bacterium BAL38]
Length = 448
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/453 (46%), Positives = 299/453 (66%), Gaps = 17/453 (3%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T N+ + ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDKALHLLKGHGKITDVNVADTLKEVRRALLDADVNFKIAKDFTTRVKEKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ + + + PTVIL++GLQG GKTT S KL
Sbjct: 61 GENVLTTLQPGQLMVKIVKDELTELMGGDAAGINLS-GNPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA D+YRPAAI+QL ++G Q+GV VY+ P +IA+ ++ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDIYRPAAINQLHVVGGQIGVEVYSEPENKNPVEIAQNAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM+E+ +V + + P E L VVDAMTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAVDEQMMNEIAEVHKAIQPEETLFVVDAMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPNRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFL Q + + +MG+M ++GMIPG GK
Sbjct: 300 VSLVERAQEQYDEEEARKLQKKIAKNEFGFDDFLAQIQQIKKMGNMKDLVGMIPGAGK-A 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRK-RVAQDSGKTEQQVSQLVAQ 501
V + + K +EA+I++MTP ER KP L+ V+RK R+A+ SG +QV+QL+ Q
Sbjct: 359 LKDVEIEDDAFKHIEAIIQSMTPIERSKPSLI---DVKRKTRIAKGSGTKIEQVNQLMKQ 415
Query: 502 L--------FQMRVRMKNLMGVMEG--GSLPAL 524
KNLM M G G +P +
Sbjct: 416 FDQMSKMMKMMQGGGGKNLMKAMSGMKGGMPKM 448
>gi|116629442|ref|YP_814614.1| Signal recognition particle GTPase [Lactobacillus gasseri ATCC
33323]
gi|311110910|ref|ZP_07712307.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|420147406|ref|ZP_14654682.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
gi|116095024|gb|ABJ60176.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus gasseri ATCC 33323]
gi|311066064|gb|EFQ46404.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|398401407|gb|EJN54909.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
Length = 476
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 301/446 (67%), Gaps = 11/446 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ A L G+ +++ +I + R+IR ALLEADV+ VV+ F++ + ++A+G
Sbjct: 3 FENLSERLQKALKNLTGKGKISEADINDASREIRLALLEADVNFKVVKDFIKKIKKEALG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+ + P QQ++KIV DEL K+MG E L ++ PT+I++ GLQG GKTT KLA
Sbjct: 63 KEVQESLNPGQQIIKIVDDELTKMMGEEAVSLNKSQHIPTIIMMVGLQGTGKTTTVGKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
NYL K K+ +L+AGD+YRPAAIDQL +G+Q+ VPVY+ + ++I K GLEEA K
Sbjct: 123 NYLMKNEKARPLLIAGDIYRPAAIDQLKQIGQQLNVPVYSEDNQ-DVAEIVKHGLEEADK 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRL+ID+ +MDELK V V +P LLVVDAMTGQ A + FN ++
Sbjct: 182 NKNDYVLIDTAGRLEIDEQLMDELKRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLD 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L
Sbjct: 242 LTGIILTKLDGDTRGGAALSIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDML 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ+ ++AE+M +K+ FDFNDF+ Q V +MG + ++I MIPG+G P
Sbjct: 302 TLIEKAQQDYDAKEAEKMAEKMRENTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NP 360
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ EK + ++A++ +MTPEERE P++L +P RR+R+A SG++ +V++++ Q
Sbjct: 361 ALKNIQIPEKQISHIKAIVYSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQ 418
Query: 502 LFQMRVRMKNLMGVMEGGSLPALSNL 527
Q K +M M G + +NL
Sbjct: 419 FKQ----SKEMMQKMTKGDMGEFANL 440
>gi|71910728|ref|YP_282278.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|410680584|ref|YP_006932986.1| signal recognition particle protein [Streptococcus pyogenes A20]
gi|71853510|gb|AAZ51533.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|409693173|gb|AFV38033.1| signal recognition particle protein [Streptococcus pyogenes A20]
Length = 520
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|386362728|ref|YP_006072059.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|421892475|ref|ZP_16323130.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
gi|350277137|gb|AEQ24505.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|379981771|emb|CCG26852.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
Length = 520
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|322389552|ref|ZP_08063102.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 903]
gi|321143746|gb|EFX39174.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 903]
Length = 523
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEPDVQEATKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIVKIVDEELTAILGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+A+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMGELRDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+GRILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKRSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNLKVDEREIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|419453246|ref|ZP_13993219.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
gi|379626955|gb|EHZ91571.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
Length = 514
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 298/430 (69%), Gaps = 9/430 (2%)
Query: 92 LEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGV 151
++ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG +I +
Sbjct: 1 MQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTL 60
Query: 152 RPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG 211
P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLAN LKK+
Sbjct: 61 NPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEE 120
Query: 212 KS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVI 270
+ +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+ + D V+
Sbjct: 121 NARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVL 180
Query: 271 VDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILT 330
+DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILT
Sbjct: 181 IDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILT 240
Query: 331 KLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ 390
K+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA
Sbjct: 241 KIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKAS 300
Query: 391 EVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVRE 448
+ ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM PA ++
Sbjct: 301 QEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKV 359
Query: 449 AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVR 508
E+ + A++ +MT EERE P+LL +P RR+R+A SG T +V++ + Q +
Sbjct: 360 DERQIARKRAIVSSMTSEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQL 417
Query: 509 MKNLMGVMEG 518
M+ GVM G
Sbjct: 418 MQ---GVMSG 424
>gi|302670925|ref|YP_003830885.1| signal recognition particle protein Ffh [Butyrivibrio
proteoclasticus B316]
gi|302395398|gb|ADL34303.1| signal recognition particle protein Ffh [Butyrivibrio
proteoclasticus B316]
Length = 457
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/436 (47%), Positives = 297/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+G+ LT+E++ +++++ ALLEADVS VV++F+ AV E+AVG
Sbjct: 3 FESLTDKLQNVFRNLRGKGRLTEEDVKLALKEVKMALLEADVSFKVVKQFISAVQERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP-TVILLAGLQGVGKTTVSAKL 203
++ G+ P Q ++KIV +E++ LMG E +E+ + TV+++ GLQG GKTT +AK+
Sbjct: 63 EDVLNGLNPGQMVIKIVNEEMISLMGSETTEIKLQPTNEITVLMMCGLQGAGKTTTAAKI 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK +G+ +LVA D+YRPAAIDQL I + V +T G+ P IAK +EEA+K
Sbjct: 123 AGKLKLKGRKPLLVACDIYRPAAIDQLQINASKQEVDFFTLGSHADPVDIAKASIEEARK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K +VVI+DTAGRLQID MM EL D+K + + LLVVDAMTGQEA + + FN ++G
Sbjct: 183 KGNNVVIIDTAGRLQIDDIMMQELVDIKNAVGVHQTLLVVDAMTGQEAVNVASEFNEKVG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G IL+K+DGDSRGGAALS K V+GKPI VG GE++ DLE FYPDRMA RILGMGDVL
Sbjct: 243 VDGIILSKMDGDSRGGAALSTKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAE---EMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
S ++KA E + DAE EM +K+ DF +L+ + + MG +S ++GM+PGMGK
Sbjct: 303 SLIDKAVEANAERDAEKDREMAQKMKKGKIDFEMYLESMKAMRNMGGLSSIMGMLPGMGK 362
Query: 441 ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA 500
I+ + + EK L +EA++ +MTPEER+ P+L+ SP R+ R+A+ SG V++ +
Sbjct: 363 ISDDMLPD-EKQLARIEAIVLSMTPEERKNPKLM--SPQRKFRIAKGSGNDIADVNRFIK 419
Query: 501 QLFQMRVRMKNLMGVM 516
Q QM+ MK + G+M
Sbjct: 420 QFEQMQKMMKQMPGLM 435
>gi|417917724|ref|ZP_12561283.1| signal recognition particle protein [Streptococcus parasanguinis
SK236]
gi|342830361|gb|EGU64700.1| signal recognition particle protein [Streptococcus parasanguinis
SK236]
Length = 523
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/437 (46%), Positives = 302/437 (69%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIETLNPAQQIVKIVDEELTAILGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV++ GTEV +I +QGLE+A+
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDEKLMGELRDVKALAEPNEILLVVDAMIGQEAANVAREFNEQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+GRILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSGRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKRSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ E+ + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 362 AMKNLKVDEREIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GV+ G
Sbjct: 420 FNQAKQMMQ---GVLSG 433
>gi|445376096|ref|ZP_21426599.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
gi|445390916|ref|ZP_21428322.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750040|gb|ELW74892.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750146|gb|ELW74983.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
Length = 520
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 296/437 (67%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E++VG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERSVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I + GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVLSMTPEERENPNLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|357237084|ref|ZP_09124427.1| putative signal recognition particle protein [Streptococcus criceti
HS-6]
gi|356885066|gb|EHI75266.1| putative signal recognition particle protein [Streptococcus criceti
HS-6]
Length = 524
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/436 (45%), Positives = 303/436 (69%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+ +++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSDKDVQEVTKEIRLALLEADVALPVVKDFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIIKIVNEELTAILGSETAEIEKSPKIPTIIMIIGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+V ++I K GL +A++
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQISVPVFDMGTDVPATEIVKSGLAQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDETLMQELRDVKDLAQPNEILLVVDSMIGQEAANVAREFNQKLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV++++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVRQITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q + MG M ++ M+PGM G
Sbjct: 303 TLIEKASQEYDEKRSAEIAEKMRENTFDFNDFIEQLDQMQSMGPMEDLLKMLPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ E+++ A++ +MTPEERE P+LL +P RR+R+A SG + V++ +
Sbjct: 363 LSNLKVDERAIARKRAIVSSMTPEERENPDLL--NPSRRRRIAAGSGNSFVDVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|225868530|ref|YP_002744478.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus]
gi|225701806|emb|CAW99232.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus]
Length = 523
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/437 (46%), Positives = 299/437 (68%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++TL++ ++ E ++IR ALLEADV+LPVV+ F++ + E+AVG
Sbjct: 3 FESLTQRLQDVFKHIRGKKTLSEADVQEVTKEIRLALLEADVALPVVKTFIKRIRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +EL + PTVI++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTGILGSETAELDKSPKIPTVIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT I GL +AK+
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTNHSAVDIVANGLAQAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL++VK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRHDYVLIDTAGRLQIDEKLMSELREVKALAKPNEILLVVDSMIGQEAANVAYEFNNQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMA-TNP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A ++ +K + A++ +MTPEERE+PELL +P RR+R+A SG + +V++ +
Sbjct: 362 ALANIKVDDKQIARKRAIVSSMTPEERERPELL--TPSRRRRIAAGSGNSFVEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKAMMQ---GVMSG 433
>gi|168188032|ref|ZP_02622667.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
gi|169294122|gb|EDS76255.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
Length = 451
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/417 (49%), Positives = 298/417 (71%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ KL+G+ L++++I + MR+++ ALLEADV+ +VR+FV+ E+ +G
Sbjct: 3 FEGLAEKLQDTLKKLRGKGKLSEKDIKQAMREVKLALLEADVNYKIVRQFVKTTGEKCLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ+VKIV DEL +LMG S++ F+ TVI+L GLQG GKTT++ KLA
Sbjct: 63 EEVMKSLTPGQQVVKIVNDELKELMGSTESKIEFSNKGLTVIMLVGLQGAGKTTMAGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA D+YRPAAI QL ++G+Q+ VPV++ G +V P IAK +E AK
Sbjct: 123 LQLRKNNKKPLLVACDIYRPAAIKQLQVVGKQIDVPVFSMGDKVSPVDIAKASIEHAKNN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
N +VVI+DTAGRL ID+A+M+EL+++K + P E+LLVVD+MTGQ+A + TFN ++ I
Sbjct: 183 NNNVVIIDTAGRLHIDEALMEELENIKISVEPNEILLVVDSMTGQDAVNVSETFNNKLDI 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
+G ILTKLDGD+RGGAALS+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS
Sbjct: 243 SGVILTKLDGDTRGGAALSIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQE + +E A+E+ K+++ F+ DF + +MG ++++I M+PG+ ++
Sbjct: 303 LIEKAQEAIDEEKAKELGDKMLNLEFNLEDFKDSMAQMKKMGPLTKIIEMMPGVNSKQLQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
+ EK +K +EAMI++MT +ER P L+A SP R++R+A SG QQV++L+
Sbjct: 363 GLDLSRGEKEIKKIEAMIDSMTLKERRDPSLVAGSPSRKRRIANGSGSNVQQVNKLL 419
>gi|374595561|ref|ZP_09668565.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gillisia
limnaea DSM 15749]
gi|373870200|gb|EHQ02198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gillisia
limnaea DSM 15749]
Length = 442
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 288/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG +T+ N+ E ++++RRAL++ADV+ + + F V E+A+
Sbjct: 1 MFDSLSDKLDNALHILKGHGQITEVNVAETLKEVRRALVDADVNYKIAKEFTTTVKEKAM 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VK+V+DEL +LMGGE + + + +P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQDVLTALKPGQMMVKLVKDELTELMGGEAAGIDLS-GKPSVILMAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
ANYLK K+ K+ +LVA DVYRPAAI+QL I+GEQ+GV V++ P I++ + AK
Sbjct: 120 ANYLKTKKSKNPLLVACDVYRPAAINQLQIVGEQIGVAVFSDEGNQDPVNISQAAIAFAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVI+DTAGRL +D+AMM E+ ++ + P E L VVD+MTGQ+A FN +
Sbjct: 180 QNGHDVVIIDTAGRLAVDEAMMTEIANIHVAIKPNETLFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVKKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A ++QKKI F F+DFL Q + +MGSM ++GMIPG GK+
Sbjct: 300 VSLVERAQEQYDEEEARKLQKKIAKDQFGFDDFLTQLHQIKKMGSMKDLMGMIPGAGKML 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MT ER P L+ S R+KR+A+ SG + QQV+QL+ Q
Sbjct: 360 K-DVDIDDDAFKHVEAIIYSMTQAERSTPVLINAS--RKKRIAKGSGTSVQQVNQLLKQF 416
>gi|139473726|ref|YP_001128442.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
gi|134271973|emb|CAM30211.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
Length = 520
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 299/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT KLA
Sbjct: 63 HEIINTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFVGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|443632733|ref|ZP_21116912.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347556|gb|ELS61614.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 446
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/436 (47%), Positives = 317/436 (72%), Gaps = 4/436 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ +K++G+ ++++++ + MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKDMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVKEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ +E+AK+
Sbjct: 123 NLLRKKHNRKPILVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D VI+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQF 420
Query: 503 FQMRVRMKNLMGVMEG 518
+M+ MK + + +G
Sbjct: 421 DEMKKMMKQMTNMSKG 436
>gi|357639717|ref|ZP_09137590.1| signal recognition particle protein [Streptococcus urinalis
2285-97]
gi|418416438|ref|ZP_12989637.1| signal recognition particle protein [Streptococcus urinalis
FB127-CNA-2]
gi|357588171|gb|EHJ57579.1| signal recognition particle protein [Streptococcus urinalis
2285-97]
gi|410874256|gb|EKS22187.1| signal recognition particle protein [Streptococcus urinalis
FB127-CNA-2]
Length = 517
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/436 (46%), Positives = 298/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L+++++ + ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNIRGKKKLSEKDVQDVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ+VKIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQIVKIVNEELTGILGSETAEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ M++A D+YRPAAIDQL LG+Q+ VPV+ GT+ +I +GLE+A++
Sbjct: 123 NKLIKEENARPMMIAADIYRPAAIDQLKTLGQQIQVPVFDMGTDHSAVEIVTKGLEKARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 DRNDYVLIDTAGRLQIDETLMAELHDVKSIAQPNEILLVVDSMIGQEAANVAREFNNQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKRSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ ++ EK + A++ +MTP ERE PELL +P RR+R+A SG + V++ +
Sbjct: 363 LSNIKVDEKQVARKRAIVSSMTPAERENPELL--TPSRRRRIANGSGNSFVDVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKQMMQ---GVMSG 433
>gi|212639591|ref|YP_002316111.1| signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
gi|212561071|gb|ACJ34126.1| Signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
Length = 446
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ +T+ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQHVMNKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ + PTV+++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTELMGGENSKIAVSNRPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPLLVAADIYRPAAIKQLETLGKQLNIPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+A+MDELK +K V P E+ LVVDAMTGQ+A + +FN ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDEALMDELKQIKEVTKPDEIFLVVDAMTGQDAVNVAQSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS+K V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVILTKLDGDTRGGAALSIKAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A+F +DFL+Q V ++G + ++ M+PG K+
Sbjct: 303 TLIEKAQAAVDEEKAKELEQKMRTASFTLDDFLEQLGQVRKLGPLDELLKMLPGANKVKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I +MT EE+ P+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 363 LNNLQIDEKQISRVEAIIRSMTKEEKMNPDIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|358067367|ref|ZP_09153848.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
gi|356694539|gb|EHI56199.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
Length = 457
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/434 (46%), Positives = 301/434 (69%), Gaps = 5/434 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ L+ + L+G+ L++ ++ ++++R ALLEADV+ VV++FV + E+AVG
Sbjct: 3 FESLSEKLQNIFKSLRGKGKLSEADVKAALKEVRMALLEADVNFKVVKKFVADIQERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA-KSRPTVILLAGLQGVGKTTVSAKL 203
++ + P Q ++KIV +EL+KL+G E E++ + TVI++AGLQG GKTT +AKL
Sbjct: 63 TEVLESLTPAQHVIKIVNEELIKLIGSETKEIIMQPQGEITVIMMAGLQGAGKTTTAAKL 122
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK +G + +LVA DVYRPAA++QL I GE+ +PV++ G + P IAK LE AKK
Sbjct: 123 AGKLKSKGNTPLLVACDVYRPAAVEQLKINGEKQNIPVFSMGNNLSPVDIAKAALEHAKK 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ +++I+DTAGRL ID+ MMDEL D+K+ +N + LLVVDAMTGQ+A + +FN +I
Sbjct: 183 NHNNILILDTAGRLHIDEKMMDELADIKKNINVNQTLLVVDAMTGQDAVNVAESFNDKIE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+ G I+TKLDGD+RGGAALS+K V+GKPI VG GE++ DLE F+PDRMAGRILGMGD+L
Sbjct: 243 LDGIIVTKLDGDTRGGAALSIKAVTGKPILYVGMGEKLSDLEVFHPDRMAGRILGMGDIL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT- 442
S +EKA+ M + +++ +K+ A FDFNDFL+Q + + +MG + ++ M+PG+G +
Sbjct: 303 SLIEKAEAEMDADKVKQISRKLQKAEFDFNDFLEQLQQIKKMGDLGGILNMLPGIGGMNL 362
Query: 443 PA-QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
PA ++ EK +EA+I +M +ER P +L +P R+ R+A+ +G +V+++V Q
Sbjct: 363 PAGGLQPDEKQFSRVEAIILSMNVKERTDPAVL--NPSRKNRIAKGAGVNISEVNRIVKQ 420
Query: 502 LFQMRVRMKNLMGV 515
QM+ MK G+
Sbjct: 421 FEQMKKMMKQFSGM 434
>gi|306827321|ref|ZP_07460608.1| signal recognition particle protein [Streptococcus pyogenes ATCC
10782]
gi|304430468|gb|EFM33490.1| signal recognition particle protein [Streptococcus pyogenes ATCC
10782]
Length = 520
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 3 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 123 NKLIKEEDARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 363 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 420
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 421 NQAKSMMQ---GVMSG 433
>gi|296133550|ref|YP_003640797.1| signal recognition particle protein [Thermincola potens JR]
gi|296032128|gb|ADG82896.1| signal recognition particle protein [Thermincola potens JR]
Length = 450
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 300/422 (71%), Gaps = 3/422 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L+ + KLKG+ L ++++ E MR++R ALLEADV+ VV+ FV+ V E+A+
Sbjct: 2 IFESLAERLQNTFKKLKGKGKLDEKDVDEAMREVRVALLEADVNYKVVKDFVKKVKERAI 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV DEL +LMGG S++ + PTV++L GLQG GKTT KL
Sbjct: 62 GAEVLGSLTPGQQVIKIVNDELTELMGGTQSKITVSSKPPTVVMLVGLQGAGKTTTVGKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L+KQG+ +LVA DVYRPAAI QL +LGEQ+ +PV++ G + P IAK +E AK
Sbjct: 122 GNQLRKQGRRPLLVAADVYRPAAIKQLKVLGEQLNIPVFSLGDKTNPVDIAKAAVEHAKS 181
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+V++DTAGRL I++ +M+ELK++K + P E+L V+DA TGQ+A + TF+ ++G
Sbjct: 182 YGNDMVLIDTAGRLHINEELMEELKNIKESVKPHEILFVMDATTGQDAVNVAKTFDEQLG 241
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I G I+TKLDGD+RGGAALSVK V+GKPIK VG GE+++ LEPF+PDRMA RILGMGDVL
Sbjct: 242 IDGVIITKLDGDTRGGAALSVKAVTGKPIKFVGMGEKLDALEPFFPDRMASRILGMGDVL 301
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKAQ + A E+Q+KI S +++ DFL+Q R V +MG + +++GM+PGMG +
Sbjct: 302 SLIEKAQSTLDANKARELQQKIKSQDYNLEDFLEQMRQVRKMGPLDQILGMLPGMGNLKQ 361
Query: 444 AQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ V+ EK + +EA+I++MTPEER P ++ +S R+KR+A+ SG V++L+ Q
Sbjct: 362 LKDVQVDEKEMLHIEAIIQSMTPEERRNPSIIKDS--RKKRIAKGSGTKVSDVNKLLKQF 419
Query: 503 FQ 504
Q
Sbjct: 420 DQ 421
>gi|160901803|ref|YP_001567384.1| signal recognition particle protein [Petrotoga mobilis SJ95]
gi|160359447|gb|ABX31061.1| signal recognition particle protein [Petrotoga mobilis SJ95]
Length = 439
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/429 (45%), Positives = 300/429 (69%), Gaps = 4/429 (0%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L + L G+ L+++NI + +R+++ +LLEADV VV+ + V E+A+
Sbjct: 1 MFENLQKKLTGVFKNLSGKGKLSEKNIKDAVREVKLSLLEADVHYKVVKELIDRVKEEAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + PDQ+ ++IVRD+L++LMGG+ + + P I+L GLQG GKT+ +AKL
Sbjct: 61 GSKVLESLTPDQEFIRIVRDDLIELMGGKENNKITISRNPGFIMLTGLQGSGKTSTAAKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
AN+ KK+GK+ +LVA D YRPAAIDQLV LGE +G+PV+T G V +I ++ + A+K
Sbjct: 121 ANFYKKKGKNPLLVAADTYRPAAIDQLVQLGEDIGIPVFT-GDRVNALKIIEESKKYAEK 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D+VIVDTAGRL ID+ MM+EL+++K+++NP E+L+VVD+M GQ+A FN ++
Sbjct: 180 LLHDIVIVDTAGRLHIDEKMMEELENIKKLINPDEILMVVDSMVGQDAVNSAKEFNDKLD 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G +++KLDGDSRGG +S++ ++GKP+KLVG GE+++DLE FYPDR GRILGMGDVL
Sbjct: 240 LSGFVVSKLDGDSRGGVIISIRYITGKPVKLVGVGEKIDDLEEFYPDRYVGRILGMGDVL 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
SF+EK ++ + ++ AEE ++ M FD DFL+Q R + ++G +S ++ M+PG+ K
Sbjct: 300 SFIEKVEQDIDKKKAEEDAERFMDGKFDLKDFLEQIRQIRKLGPLSSLLEMVPGVPK-EQ 358
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
V + E+ LK EA+I +MTP+ER+ P +L S R++R+A+ SG T Q +++L+
Sbjct: 359 VDVTKGEQELKKFEAIINSMTPKERKNPGILTYS--RKQRIAKGSGTTLQDINRLLKSYD 416
Query: 504 QMRVRMKNL 512
Q++ MK +
Sbjct: 417 QLKKTMKQM 425
>gi|406673308|ref|ZP_11080531.1| signal recognition particle protein [Bergeyella zoohelcum CCUG
30536]
gi|405586494|gb|EKB60254.1| signal recognition particle protein [Bergeyella zoohelcum CCUG
30536]
Length = 454
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 287/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L+ A + +KG +T+ N+ E +++IRRAL++ADV+ V + + V ++A+
Sbjct: 1 MFNNLQDKLDKALHNIKGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P Q + KIV DELV LMGG E + +P+VIL+AGLQG GKTT S KL
Sbjct: 61 GQNVLTSLTPGQLMTKIVHDELVTLMGG-TQEGINLSGKPSVILIAGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A++LK K+ K +LVA DVYRPAAI+QL +LGEQ+ VPVYT PS IA+ + AK
Sbjct: 120 AHFLKTKKNKKPLLVACDVYRPAAIEQLKVLGEQIQVPVYTEEGSNNPSTIAENAVNYAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ DVVIVDTAGRL +D+ MM+E+K V ++P E L VVD+MTGQ+A FN +
Sbjct: 180 HNSFDVVIVDTAGRLAVDEQMMNEIKTVHHFIHPNETLFVVDSMTGQDAVNTAKAFNDAL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G +LTKLDGD+RGGAAL+++ V KPIK + GE+ME L+ FYP+RMA RILGMGDV
Sbjct: 240 NFDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +E+A+++ KKI F F+DFL+Q + + RMG+M ++GMIPG+GK
Sbjct: 300 ISLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLQQIQQIKRMGNMKDLMGMIPGVGKAI 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I++MTPEER KP ++ + R+ R+A+ +G+ + V+QL+ Q
Sbjct: 360 -KDVDINDDAFKHIEAIIQSMTPEERRKPSII--NTQRKNRIAKGAGRKIEDVNQLMKQF 416
>gi|94267668|ref|ZP_01290954.1| Signal recognition particle protein [delta proteobacterium MLMS-1]
gi|93451906|gb|EAT02634.1| Signal recognition particle protein [delta proteobacterium MLMS-1]
Length = 456
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 290/433 (66%), Gaps = 8/433 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L++ L+ + L+G+ TL++ENI E MR++R ALLEADV+ V R F+ AV+E+AV
Sbjct: 1 MFDNLSNRLQDVFKDLRGQGTLSEENIQEAMREVRLALLEADVNFQVARDFIDAVTEKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++R + PDQQ++KIV ELV L+GG + L P VI+L GLQG GKTT + KL
Sbjct: 61 GHEVLRSLNPDQQVIKIVHQELVDLLGGSTAALELGSRTPAVIMLVGLQGSGKTTSAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A L+ +G+ LV DVYRPAAIDQL +L E + VPVY + ++ P I +Q L A +
Sbjct: 121 ARRLRGEGRKPYLVPADVYRPAAIDQLTVLAESLQVPVYPSRSDQDPVTICRQALHRADE 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D +++DTAGRL +D+ +MDEL +K L P E+LLV DAMTGQ+A + F+ ++
Sbjct: 181 AGCDTLLIDTAGRLHVDETLMDELGRLKEALQPAEILLVADAMTGQDAVTVAEKFHQDLD 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
++G ILTKLDGD+RGGAALS++ +G+P+K VG GE ++ LEPF+PDRMA RILG GDVL
Sbjct: 241 LSGVILTKLDGDARGGAALSIRRATGRPLKFVGLGEGLDALEPFHPDRMASRILGKGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S +EKA+ + +E AE++ ++I F DFL Q + V +MG++ +++GM+PGMGK+
Sbjct: 301 SLIEKAESAIDKEKAEDLAQRIRKDGFTLEDFLDQIKQVRKMGNLEQLMGMLPGMGKLK- 359
Query: 444 AQVREA----EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
Q++E E+ L +EA+I +MT +ER ++ S RR R+A+ SG Q V++++
Sbjct: 360 -QLKEMPKPDERELTKIEAVINSMTAKERRNHAMINAS--RRSRIAKGSGTQLQDVNKVI 416
Query: 500 AQLFQMRVRMKNL 512
+M MK
Sbjct: 417 KSYTEMLKMMKKF 429
>gi|386344584|ref|YP_006040748.1| signal recognition particle protein [Streptococcus thermophilus JIM
8232]
gi|339278045|emb|CCC19793.1| signal recognition particle [Streptococcus thermophilus JIM 8232]
Length = 520
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 296/437 (67%), Gaps = 9/437 (2%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + L+++ + E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + QQ++KIV +EL +++G E SE+ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K+Q M++A D+YRPAAIDQL LG+Q+ VPV+ GTE +I + GLE+A+
Sbjct: 123 NKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARA 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M EL+D+K +P E+LLVVD+M GQEAA + FN ++
Sbjct: 183 NKNDYVLIDTAGRLQIDETLMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALS++E++ KPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 ITGVVLTKIDGDTRGGAALSIREITDKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ + E+ +K+ FDFNDF+ Q V MG M ++ M+PGM P
Sbjct: 303 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V+ EK + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ +
Sbjct: 362 ALANVKVDEKQIARKRAIVLSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKD 419
Query: 502 LFQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 420 FNQAKQMMQ---GVMSG 433
>gi|94988647|ref|YP_596748.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94992471|ref|YP_600570.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|417856844|ref|ZP_12501903.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|94542155|gb|ABF32204.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94545979|gb|ABF36026.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|387933799|gb|EIK41912.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 522
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 300/436 (68%), Gaps = 7/436 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + ++G++ L++ ++ E ++IR ALLEADV+LPVV+ F++ V E+A+G
Sbjct: 5 FESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIG 64
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLA
Sbjct: 65 HEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLA 124
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GT+ I ++GLE+A++
Sbjct: 125 NKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARE 184
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVD+M GQEAA + FN ++
Sbjct: 185 NRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPDEILLVVDSMIGQEAANVAYEFNHQLS 244
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG +LTK+DGD+RGGAALSV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 245 ITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLL 304
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKIT 442
+ +EKA + ++ + E+ +K+ FDFNDF++Q V MG M ++ MIPGM G
Sbjct: 305 TLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPA 364
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
A ++ E + A++ +MTP ERE P+LL +P RR+R+A SG + +V++ +
Sbjct: 365 LANIKVDENQIARKRAIVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDF 422
Query: 503 FQMRVRMKNLMGVMEG 518
Q + M+ GVM G
Sbjct: 423 NQAKSMMQ---GVMSG 435
>gi|255994441|ref|ZP_05427576.1| signal recognition particle protein [Eubacterium saphenum ATCC
49989]
gi|255993154|gb|EEU03243.1| signal recognition particle protein [Eubacterium saphenum ATCC
49989]
Length = 442
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/427 (46%), Positives = 304/427 (71%), Gaps = 3/427 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L+ ++ A++KLKG+ TL++++I MR+I+ ALLEADVS +V+ FV V E+++G
Sbjct: 3 FESLSEKMQRAFSKLKGKGTLSEKDIDVAMREIKLALLEADVSYKIVKEFVNDVKEKSLG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + PDQQ++K V EL +LMG S+L F+ T+ ++ GLQG GKTT AKLA
Sbjct: 63 SEVMKSLTPDQQVIKFVNTELRELMGDVSSKLTFSPKGFTIYMMVGLQGTGKTTTCAKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
YLK+QGK ML A DVYRPAAIDQL ++G+ VGV VY E P +IAK +E+A++
Sbjct: 123 KYLKEQGKKPMLAACDVYRPAAIDQLEVVGKDVGVEVYADREESSPVKIAKAAIEKAERL 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
++V+I+DTAGRLQID+ +MDEL D+K ++P E+LLVVDA+TGQ+A + F+ ++G+
Sbjct: 183 GMNVLILDTAGRLQIDEELMDELADIKSEVHPHEILLVVDALTGQDAVNTASGFHDKLGV 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G I+TKLDGD+RGGAALSVK+V+G IK VG GE+ ++ E F+PDRMA RILGMGDVL+
Sbjct: 243 DGVIMTKLDGDARGGAALSVKKVTGTAIKFVGLGEKFDEFEVFHPDRMADRILGMGDVLT 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITP 443
+E+A++ + +E AE+++K++ F DFL+QT + +MG +++++GM+PG K +
Sbjct: 303 LIEQAEQTIDKEQAEKIEKRLRKNQFTLVDFLEQTVQIKKMGGVAKLLGMMPGASKQMNK 362
Query: 444 AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLF 503
+ E+ LK E++I +MTP+ER+ P LL S RR+R+++ SG+ ++ L+ +
Sbjct: 363 IDAGKGEEELKRFESIIYSMTPDERDNPALLNAS--RRRRISKGSGQPVSAINNLIKRYE 420
Query: 504 QMRVRMK 510
+++ MK
Sbjct: 421 EVKKMMK 427
>gi|410727088|ref|ZP_11365311.1| signal recognition particle protein [Clostridium sp. Maddingley
MBC34-26]
gi|410599423|gb|EKQ53976.1| signal recognition particle protein [Clostridium sp. Maddingley
MBC34-26]
Length = 450
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/417 (46%), Positives = 294/417 (70%), Gaps = 2/417 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ + KLKG+ L +++I E MR+++ ALLEADV+ VV++F+ +VS + VG
Sbjct: 3 FEGLGEKLQETFRKLKGKGKLNEKDIKEAMREVKLALLEADVNYKVVKQFISSVSSKCVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ + P QQ++KIV +EL LMGG S++ ++ S T+I+L GLQG GKTT+ KLA
Sbjct: 63 SEVLESLTPGQQVIKIVNEELTNLMGGSESKINYSSSGLTIIMLVGLQGAGKTTMCGKLA 122
Query: 205 NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK 264
L+K K +LVA D+YRPAAI QL ++G+Q+ +PV++ G +V P +IAK G+ AK
Sbjct: 123 LNLRKDNKKPLLVACDIYRPAAIKQLEVVGKQIEIPVFSMGDKVNPVEIAKNGIAHAKDN 182
Query: 265 NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGI 324
+VVI+DTAGRL ID+ +M ELKD+K + P+E+LLVVDAMTGQ+A + +FN ++ +
Sbjct: 183 GNNVVIIDTAGRLHIDEELMHELKDIKENVKPSEILLVVDAMTGQDAVNVAESFNNDLDL 242
Query: 325 TGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLS 384
G ILTKLDGD+RGGAALS+K + KPIK G GE+M D E F+PDRMA RILGMGDVLS
Sbjct: 243 NGVILTKLDGDTRGGAALSIKSIINKPIKYAGVGEKMNDFEVFHPDRMASRILGMGDVLS 302
Query: 385 FVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KIT 442
+EKAQE + +++A ++ K++++ F+F D+L + ++G +++++ MIPG+ ++
Sbjct: 303 LIEKAQEAIDEKEAADLGKRMLNQEFNFEDYLMAMEQMKKLGPLNKIMEMIPGLNTKELQ 362
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 499
++ ++L +A+I++MT +ER P L+ +SP R+ R+A+ SG Q+V++L+
Sbjct: 363 GFDFDKSSEALDRTKAIIQSMTSKERRNPNLILKSPSRKTRIAKGSGTNIQEVNKLM 419
>gi|300172914|ref|YP_003772079.1| signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
gi|299887292|emb|CBL91260.1| Signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
Length = 489
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 283/429 (65%), Gaps = 6/429 (1%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L A L G +++E++ MR+IR ALLEADV+ V++FV V E+A G
Sbjct: 3 FENLTERLSKAMKNLTGRGRVSEEDLRATMREIRLALLEADVNYDTVKKFVANVREKASG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
++ G+ P QQ+VKIV DEL MG E + L + PT+I++AGLQG GKTT AKLA
Sbjct: 63 ADILEGLNPAQQVVKIVNDELTTTMGEEAAPLNKSPKIPTIIMMAGLQGAGKTTTVAKLA 122
Query: 205 NYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
LKK+ + +L+A DVYRPAAIDQL ILG + +PV+ GT V P +I +QGL +A +
Sbjct: 123 YKLKKEENARPLLIAADVYRPAAIDQLEILGRDLEIPVFQLGTAVNPREIVRQGLAKAAE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
D V +DTAGRLQID +M ELKDV + +P E+LL VDAMTGQ AA F+ +
Sbjct: 183 NKNDYVFIDTAGRLQIDDVLMQELKDVAEIAHPDEILLTVDAMTGQNAAETAKGFSAALD 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ +E + +K+ FDFNDF+ Q + V MG M ++ MIPGM P
Sbjct: 303 TLIEKAQRDFDEEAQAKQLEKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NP 361
Query: 444 --AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 501
A V K +EA++ +MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q
Sbjct: 362 ALANVNIDAKQFSHLEAIVNSMTPAEREDPDLI--NPSRRRRLAAGAGRPIIEVNRMIKQ 419
Query: 502 LFQMRVRMK 510
QMR M
Sbjct: 420 FDQMRKMMN 428
>gi|336171516|ref|YP_004578654.1| signal recognition particle protein [Lacinutrix sp. 5H-3-7-4]
gi|334726088|gb|AEH00226.1| signal recognition particle protein [Lacinutrix sp. 5H-3-7-4]
Length = 442
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/420 (47%), Positives = 288/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A + LKG ++T+ N+ E ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFNNLSEKLDKALHVLKGHGSITEVNVAETLKEVRRALLDADVNFKIAKDFTNRVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q +VKIV+DEL +LMGG+ +E + PTVIL++GLQG GKTT S KL
Sbjct: 61 GANVLTTLQPGQLMVKIVKDELTELMGGD-AEGINLSGTPTVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAA+DQL ++G+Q+ V VY+ P IA+ G+ AK
Sbjct: 120 ANFLKSKKTKKPLLVACDVYRPAAVDQLHVVGDQIKVDVYSDKGNNDPVAIAQAGIAHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+ +VVI+DTAGRL +D+AMM E+ ++ + P E L VVD+MTGQ+A FN +
Sbjct: 180 QNGHNVVIIDTAGRLAVDEAMMTEISNIHTAIKPQETLFVVDSMTGQDAVNTAKAFNDVL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDIFYPSRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQE +++A ++QKKI F F+DFLKQ + + +MG+M ++GMIPG GK
Sbjct: 300 VSLVERAQEQFDEQEARKLQKKIAKNQFGFDDFLKQIQQIKKMGNMKDLVGMIPGAGK-M 358
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
+ + + K +EA+I +MT +ER P ++ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 359 MKDIDIDDDAFKHIEAIIHSMTVKERTNPAIINAS--RKKRIGKGSGTSVQQVNQLLKQF 416
>gi|373108348|ref|ZP_09522630.1| signal recognition particle protein [Myroides odoratimimus CCUG
10230]
gi|423130007|ref|ZP_17117682.1| signal recognition particle protein [Myroides odoratimimus CCUG
12901]
gi|423133700|ref|ZP_17121347.1| signal recognition particle protein [Myroides odoratimimus CIP
101113]
gi|423329251|ref|ZP_17307058.1| signal recognition particle protein [Myroides odoratimimus CCUG
3837]
gi|371646465|gb|EHO11976.1| signal recognition particle protein [Myroides odoratimimus CCUG
10230]
gi|371647520|gb|EHO13024.1| signal recognition particle protein [Myroides odoratimimus CCUG
12901]
gi|371648092|gb|EHO13584.1| signal recognition particle protein [Myroides odoratimimus CIP
101113]
gi|404603651|gb|EKB03305.1| signal recognition particle protein [Myroides odoratimimus CCUG
3837]
Length = 446
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 287/420 (68%), Gaps = 5/420 (1%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L+ A++ LKG +T+ N+ + ++++RRALL+ADV+ + + F V E+A+
Sbjct: 1 MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTNIVKEKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ ++P Q ++KIV+DEL +LMGGE + + + P+VIL++GLQG GKTT S KL
Sbjct: 61 GQEVLTTLQPGQLMIKIVKDELTQLMGGEAAGINLS-GNPSVILMSGLQGSGKTTFSGKL 119
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
AN+LK K+ K +LVA DVYRPAAI+QL ++G+Q+G+ VY+ P IA+ ++ AK
Sbjct: 120 ANFLKTKKNKKPLLVACDVYRPAAINQLHVVGDQLGIEVYSEEGNNNPVLIAENAIKHAK 179
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
+VVIVDTAGRL +D+ MM E+ ++ + + P E L VVD+MTGQ+A FN +
Sbjct: 180 ANGFNVVIVDTAGRLAVDEEMMTEIANIHKAITPHETLFVVDSMTGQDAVNTAKAFNDRL 239
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
G ILTKLDGD+RGGAA+S+K V KPIK +G GE+ME ++ FYPDRMA RILGMGDV
Sbjct: 240 NFDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPDRMADRILGMGDV 299
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+S VE+AQ +E+A ++QKKI F F+DFL Q + V +MG+M ++GMIPG+GK
Sbjct: 300 ISLVERAQAQYDEEEARKIQKKIAKNEFGFDDFLNQIQQVKKMGNMKDLMGMIPGVGKAM 359
Query: 443 PAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
V + + K +EA+I +MTP ER KP ++ R+ R+A+ SG QQV+QL+ Q
Sbjct: 360 K-DVEIEDDAFKHIEAIIYSMTPAERSKPSII--DVKRKNRIAKGSGTDIQQVNQLLKQF 416
>gi|433446055|ref|ZP_20410186.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
gi|432000800|gb|ELK21692.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
Length = 446
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ NK++G+ +T+ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQHVMNKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTV+++ GLQG GKTT + KLA
Sbjct: 63 QEVMKSLTPGQQVIKVVKEELTELMGGENSKIAVASRPPTVVMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + +LVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPLLVAADIYRPAAIKQLETLGKQLDIPVFSLGDQVSPVEIAKQAIVKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
++ D V++DTAGRL ID+A+MDELK +K V P E+ LVVDAMTGQ+A + +FN ++G
Sbjct: 183 EHYDYVLIDTAGRLHIDEALMDELKQIKEVTKPDEIFLVVDAMTGQDAVNVAQSFNEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD+RGGAALS+K V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVILTKLDGDTRGGAALSIKAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ +A+F +DFL+Q V ++G + ++ M+PG K+
Sbjct: 303 TLIEKAQTAVDEEKAKELEQKMRTASFTLDDFLEQLGQVRKLGPLDELLKMLPGANKVKG 362
Query: 444 -AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 502
++ EK + +EA+I +MT EE+ P+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 363 LNNLQIDEKQISRVEAIIRSMTKEEKMNPDIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|323456635|gb|EGB12501.1| putative GTP binding signal recognition particle protein SRP54
[Aureococcus anophagefferens]
Length = 530
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/463 (47%), Positives = 297/463 (64%), Gaps = 24/463 (5%)
Query: 76 RRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFV 135
+R + F +L + AA + L G+ +T+ N +RD+RR+LL+ADV+ VV FV
Sbjct: 26 KRATTQLYFFDKLAESITAATDVLSGKSRMTEANTKSALRDVRRSLLDADVAKVVVDGFV 85
Query: 136 QAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKS-------------- 181
+ V A+ + GV P QQ VKIV DEL ++MGG+ EL+F+
Sbjct: 86 ENVQASALDGEVAEGVDPGQQFVKIVYDELKRVMGGDDDELLFSDDPEAAAKARAGLAYR 145
Query: 182 ---RPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVILGEQV 237
PTV+LL GLQG GKTT +AKLA LK++ GK+ MLVA DVYRPAA++QL ILGEQV
Sbjct: 146 DDGAPTVVLLCGLQGAGKTTAAAKLALRLKEEEGKTPMLVAADVYRPAAVEQLQILGEQV 205
Query: 238 GVPVYTAGTEVKPSQ---IAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 294
GVPVY E IA G+ AK++ DVVIVDTAGR I++++M EL+ V+
Sbjct: 206 GVPVYAEAFEAGAGDAVAIATAGVRAAKERGADVVIVDTAGRQVIEESLMAELRSVRAAT 265
Query: 295 NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKL 354
P E LLV+DAMTGQ+AA+L F+ +TG++LTKLDGD+RGGAALSV+ VSGKPIK
Sbjct: 266 KPDETLLVLDAMTGQDAASLAKRFDDACPLTGSVLTKLDGDARGGAALSVRAVSGKPIKF 325
Query: 355 VGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFND 414
VG GE++ DLEPF+P RMA RILGMGDV+S VEKA + +A+ + ++ A F+F+D
Sbjct: 326 VGVGEKVGDLEPFFPARMASRILGMGDVVSLVEKASKQQSAAEAKAVMERTKQAKFNFDD 385
Query: 415 FLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELL 474
+L Q R V+ MGS V M+PGMG I Q+ AE +KI ++I +MTP+ER +P+L+
Sbjct: 386 YLDQARMVSNMGSFGAVAKMMPGMGGIDNDQIAAAEAKIKIQASLINSMTPKERGEPDLI 445
Query: 475 ---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 514
+ R+KR+A SG++ Q Q +++ QMR M + G
Sbjct: 446 IRDKSALARQKRIAAGSGRSVDQAKQFLSEFQQMRTMMAKMAG 488
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,069,056,290
Number of Sequences: 23463169
Number of extensions: 325557912
Number of successful extensions: 1448031
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9955
Number of HSP's successfully gapped in prelim test: 2109
Number of HSP's that attempted gapping in prelim test: 1413684
Number of HSP's gapped (non-prelim): 13651
length of query: 571
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 423
effective length of database: 8,886,646,355
effective search space: 3759051408165
effective search space used: 3759051408165
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)