BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008283
         (571 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1TGZ|A Chain A, Structure Of Human Senp2 In Complex With Sumo-1
 pdb|1TH0|A Chain A, Structure Of Human Senp2
 pdb|1TH0|B Chain B, Structure Of Human Senp2
          Length = 226

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 41/219 (18%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 371
           + I   DI  L    +L   ++NFY+  L    + Q  P        H F+T+FY KLK 
Sbjct: 32  LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 85

Query: 372 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIIL 431
                GG     +   +RW KGVN+F++  +L+PIH  VHWSLV+I      D     + 
Sbjct: 86  -----GG-----YQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI------DLRKKCLK 129

Query: 432 HLDSL--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 489
           +LDS+  K H    I   +  +L++E     +    SDL + E  W H   +  +    +
Sbjct: 130 YLDSMGQKGH---RICEILLQYLQDE----SKTKRNSDLNLLE--WTHHSMKPHE----I 176

Query: 490 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
           PQQ N  DCG+F   + +    + P    +  + +F K+
Sbjct: 177 PQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 215


>pdb|2IO0|A Chain A, Crystal Structure Of Human Senp2 In Complex With Presumo-2
 pdb|2IO1|A Chain A, Crystal Structure Of Human Senp2 In Complex With Presumo-3
 pdb|2IO1|C Chain C, Crystal Structure Of Human Senp2 In Complex With Presumo-3
 pdb|2IO1|E Chain E, Crystal Structure Of Human Senp2 In Complex With Presumo-3
 pdb|2IO2|A Chain A, Crystal Structure Of Human Senp2 In Complex With
           Rangap1-sumo-1
 pdb|2IO3|A Chain A, Crystal Structure Of Human Senp2 In Complex With Rangap1-
           Sumo-2
          Length = 232

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 41/219 (18%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 371
           + I   DI  L    +L   ++NFY+  L    + Q  P        H F+T+FY KLK 
Sbjct: 38  LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 91

Query: 372 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIIL 431
                GG     +   +RW KGVN+F++  +L+PIH  VHWSLV+I +  K       + 
Sbjct: 92  -----GG-----YQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDLRKK------CLK 135

Query: 432 HLDSL--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 489
           +LDS+  K H    I   +  +L++E     +    SDL + E  W H   +  +    +
Sbjct: 136 YLDSMGQKGHRICEI---LLQYLQDE----SKTKRNSDLNLLE--WTHHSMKPHE----I 182

Query: 490 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
           PQQ N  D G+F   + +    + P    +  + +F K+
Sbjct: 183 PQQLNGSDSGMFTCKYADYISRDKPITFTQHQMPLFRKK 221


>pdb|2XPH|A Chain A, Crystal Structure Of Human Senp1 With The Bound Cobalt
 pdb|2XPH|B Chain B, Crystal Structure Of Human Senp1 With The Bound Cobalt
          Length = 238

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 31/214 (14%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
           + I   DI  L    +L   I+NFY+  L  ++    + +   H FNT+F++KLK A   
Sbjct: 44  LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKE--KGLPSVHAFNTFFFTKLKTAG-- 99

Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
                   +   +RW K V++F    +L+PIH  VHW L ++    K       I + DS
Sbjct: 100 --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 145

Query: 436 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 494
           +       I +     L +   YLKQE +           WQ   ++  +    +PQQ N
Sbjct: 146 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 193

Query: 495 DYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
             DCG+F   + +   ++ P    ++ +  F KR
Sbjct: 194 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 227


>pdb|2XRE|A Chain A, Detection Of Cobalt In Previously Unassigned Human Senp1
           Structure
 pdb|2XRE|B Chain B, Detection Of Cobalt In Previously Unassigned Human Senp1
           Structure
          Length = 230

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 31/214 (14%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
           + I   DI  L    +L   I+NFY+  L  ++    + +   H FNT+F++KLK A   
Sbjct: 36  LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKE--KGLPSVHAFNTFFFTKLKTAG-- 91

Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
                   +   +RW K V++F    +L+PIH  VHW L ++    K       I + DS
Sbjct: 92  --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 137

Query: 436 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 494
           +       I +     L +   YLKQE +           WQ   ++  +    +PQQ N
Sbjct: 138 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 185

Query: 495 DYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
             DCG+F   + +   ++ P    ++ +  F KR
Sbjct: 186 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 219


>pdb|3EAY|A Chain A, Crystal Structure Of The Human Senp7 Catalytic Domain
          Length = 323

 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 300 MIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCH 359
           ++   I YP       + +   D+  L    +L   I++FY++YL L+ + ++  +   H
Sbjct: 17  LVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSH 75

Query: 360 FFNTYFYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWS 413
            F+++FY  L    ++   D  +  +  RR      W + +NIF K Y+ +P++E  HW 
Sbjct: 76  IFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWY 135

Query: 414 LVIICIP 420
           L +IC P
Sbjct: 136 LAVICFP 142



 Score = 40.8 bits (94), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)

Query: 428 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNY-LKQEVSPSDLPIAERIWQHLPRRIDDRI 486
           P IL LDSLK     +   N+R +L+ EW   LK     S   +             D  
Sbjct: 206 PCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNMV------------DLC 253

Query: 487 IPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLL 546
             VP+Q N  DCG+++L ++E F ++    +   +L +  ++WF        R  IR L+
Sbjct: 254 PKVPKQDNSSDCGVYLLQYVESFFKDP---IVNFELPIHLEKWFPRHVIKTKREDIRELI 310

Query: 547 KK 548
            K
Sbjct: 311 LK 312


>pdb|2IYC|A Chain A, Senp1 Native Structure
 pdb|2IYC|B Chain B, Senp1 Native Structure
 pdb|2IYD|A Chain A, Senp1 Covalent Complex With Sumo-2
          Length = 226

 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 31/214 (14%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
           + I   DI  L    +L   I+NFY+  L  ++    + +   H FNT+F++KLK A   
Sbjct: 32  LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKE--KGLPSVHAFNTFFFTKLKTAG-- 87

Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
                   +   +RW K V++F    +L+PIH  VHW L ++    K       I + DS
Sbjct: 88  --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 133

Query: 436 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 494
           +       I +     L +   YLKQE +           WQ   ++  +    +PQQ N
Sbjct: 134 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 181

Query: 495 DYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
             DCG+F   + +   ++ P    ++ +  F KR
Sbjct: 182 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 215


>pdb|2CKG|A Chain A, The Structure Of Senp1 Sumo-2 Co-Complex Suggests A
           Structural Basis For Discrimination Between Sumo
           Paralogues During Processing
 pdb|2CKG|B Chain B, The Structure Of Senp1 Sumo-2 Co-Complex Suggests A
           Structural Basis For Discrimination Between Sumo
           Paralogues During Processing
 pdb|2CKH|A Chain A, Senp1-sumo2 Complex
          Length = 225

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 32/214 (14%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
           + I   DI  L    +L   I+NFY+  L  ++    + +   H FNT+F++KLK A   
Sbjct: 32  LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKE--KGLPSVHAFNTFFFTKLKTAG-- 87

Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
                   +   +RW K V++F    +L+PIH  VHW L ++    K       I + DS
Sbjct: 88  --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 133

Query: 436 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 494
           +       I +     L +   YLKQE +           WQ   ++       +PQQ N
Sbjct: 134 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQ-----IPQQMN 180

Query: 495 DYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
             DCG+F   + +   ++ P    ++ +  F KR
Sbjct: 181 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 214


>pdb|2IY0|A Chain A, Senp1 (Mutant) Sumo1 Rangap
 pdb|2IY1|A Chain A, Senp1 (Mutant) Full Length Sumo1
 pdb|2IY1|C Chain C, Senp1 (Mutant) Full Length Sumo1
          Length = 226

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 39/218 (17%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
           + I   DI  L    +L   I+NFY+  L  ++    + +   H FNT+F++KLK A   
Sbjct: 32  LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKE--KGLPSVHAFNTFFFTKLKTAG-- 87

Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
                   +   +RW K V++F    +L+PIH  VHW L ++    K       I + DS
Sbjct: 88  --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 133

Query: 436 L----KLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVP 490
           +       C + +             YLKQE +           WQ   ++  +    +P
Sbjct: 134 MGGINNEACRILL------------QYLKQESIDKKRKEFDTNGWQLFSKKSQE----IP 177

Query: 491 QQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
           QQ N  D G+F   + +   ++ P    ++ +  F KR
Sbjct: 178 QQMNGSDAGMFACKYADCITKDRPINFTQQHMPYFRKR 215


>pdb|2G4D|A Chain A, Crystal Structure Of Human Senp1 Mutant (C603s) In Complex
           With Sumo-1
 pdb|2G4D|C Chain C, Crystal Structure Of Human Senp1 Mutant (C603s) In Complex
           With Sumo-1
          Length = 205

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 31/214 (14%)

Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
           + I   DI  L    +L   I+NFY+  L  ++    + +   H FNT+F++KLK A   
Sbjct: 11  LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKE--KGLPSVHAFNTFFFTKLKTAG-- 66

Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
                   +   +RW K V++F    +L+PIH  VHW L ++    K       I + DS
Sbjct: 67  --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 112

Query: 436 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 494
           +       I +     L +   YLKQE +           WQ   ++  +    +PQQ N
Sbjct: 113 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 160

Query: 495 DYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 528
             D G+F   + +   ++ P    ++ +  F KR
Sbjct: 161 GSDSGMFACKYADCITKDRPINFTQQHMPYFRKR 194


>pdb|1EUV|A Chain A, X-Ray Structure Of The C-Terminal Ulp1 Protease Domain In
           Complex With Smt3, The Yeast Ortholog Of Sumo
          Length = 221

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 47/214 (21%)

Query: 314 ESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAV 373
           +++EI   D   LAP  +L   I+ F+++Y++ +++P   A      FN++FY+ L E  
Sbjct: 31  DNIEITVRDFKTLAPRRWLNDTIIEFFMKYIE-KSTPNTVA------FNSFFYTNLSER- 82

Query: 374 SHKGGDKDSFFIKFRRWW--KGVNIFQKSYVLIPIH-EDVHWSLVIICIPDKEDESGPII 430
            ++G          RRW   K   I +   +  PI+    HW+L II +  K       I
Sbjct: 83  GYQG---------VRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKKT------I 127

Query: 431 LHLDSLK---LHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRII 487
            ++DSL       S +I ++++ ++ EE     +     D  +                +
Sbjct: 128 GYVDSLSNGPNAMSFAILTDLQKYVMEE----SKHTIGEDFDLIH--------------L 169

Query: 488 PVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKD 521
             PQQ N YDCG++V         +AP     KD
Sbjct: 170 DCPQQPNGYDCGIYVCMNTLYGSADAPLDFDYKD 203


>pdb|2HKP|A Chain A, Sumo Protease Ulp1 With The Catalytic Cysteine Oxidized To
           A Sulfenic Acid
 pdb|2HL8|A Chain A, Sumo Protease Ulp1 With The Catalytic Cysteine Oxidized To
           A Sulfinic Acid
 pdb|2HL9|A Chain A, Sumo Protease Ulp1 With The Catalytic Cysteine Oxidized To
           A Sulfonic Acid
          Length = 221

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 47/214 (21%)

Query: 314 ESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAV 373
           +++EI   D   LAP  +L   I+ F+++Y++ +++P   A      FN++FY+ L E  
Sbjct: 31  DNIEITVRDFKTLAPRRWLNDTIIEFFMKYIE-KSTPNTVA------FNSFFYTNLSER- 82

Query: 374 SHKGGDKDSFFIKFRRWW--KGVNIFQKSYVLIPIH-EDVHWSLVIICIPDKEDESGPII 430
            ++G          RRW   K   I +   +  PI+    HW+L II +  K       I
Sbjct: 83  GYQG---------VRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKKT------I 127

Query: 431 LHLDSLK---LHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRII 487
            ++DSL       S +I ++++ ++ EE     +     D  +                +
Sbjct: 128 GYVDSLSNGPNAMSFAILTDLQKYVMEE----SKHTIGEDFDLIH--------------L 169

Query: 488 PVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKD 521
             PQQ N YD G++V         +AP     KD
Sbjct: 170 DCPQQPNGYDXGIYVCMNTLYGSADAPLDFDYKD 203


>pdb|3MT0|A Chain A, The Crystal Structure Of A Functionally Unknown Protein
           Pa17 Pseudomonas Aeruginosa Pao1
          Length = 290

 Score = 29.6 bits (65), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 22/115 (19%)

Query: 32  LIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGK 91
           LI+K+  P  P +K++   DD     +L R  P   L  + AR            P  G 
Sbjct: 92  LIIKQHFPDNPLKKAILTPDD----WKLLRFAPCPVLXTKTAR------------PWTGG 135

Query: 92  KILATVTRLEKECERRRL-AGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQS 145
           KILA V     + E R L AG +    DI G  K T    S       PSP + S
Sbjct: 136 KILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVIS-----AHPSPXLSS 185


>pdb|1XT9|A Chain A, Crystal Structure Of Den1 In Complex With Nedd8
          Length = 212

 Score = 29.3 bits (64), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 470 IAERIWQHLPRRIDDRII---PVPQQKNDYDCGLFVL 503
           +AE++   L R+ D         P Q+N YDCG++V+
Sbjct: 132 VAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVI 168


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.317    0.134    0.404 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,637,763
Number of Sequences: 62578
Number of extensions: 774634
Number of successful extensions: 1447
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1417
Number of HSP's gapped (non-prelim): 15
length of query: 571
length of database: 14,973,337
effective HSP length: 104
effective length of query: 467
effective length of database: 8,465,225
effective search space: 3953260075
effective search space used: 3953260075
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)