BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008290
(571 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVE7|MATE3_ARATH MATE efflux family protein 3, chloroplastic OS=Arabidopsis thaliana
GN=DTX45 PE=2 SV=2
Length = 560
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 300/527 (56%), Positives = 388/527 (73%), Gaps = 20/527 (3%)
Query: 41 PNCSFGVINRAKNGFNPAIMCCGSVSDQHASDYITINPSGVGERLASDGGELSNESRKSA 100
PN F + R K+ NP CG V D + ++L G + +R
Sbjct: 53 PNPMFPFVTRRKSQTNPD---CGVVKLGEEDDSCSSL-----DKLPEVNGVHTGVARPV- 103
Query: 101 ATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNIL 160
+++ +L+MLSLPAIAGQAI+P+ LMETAYIGRLG +EL SAGVS +IFN +
Sbjct: 104 --------DIKRELVMLSLPAIAGQAIDPLTLLMETAYIGRLGSVELGSAGVSMAIFNTI 155
Query: 161 SKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVL 220
SK+FNIPLLSVATSFVAEDI++ +++D S+ S ++ G E RK L SVSTALVL
Sbjct: 156 SKLFNIPLLSVATSFVAEDIAKIAAQDLASEDSQSDIPSQGLPE---RKQLSSVSTALVL 212
Query: 221 ALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFR 280
A+ IGI EALA+ SG FL +MGI S S M IPA++FL LRA+GAPA V+SLA+QGIFR
Sbjct: 213 AIGIGIFEALALSLASGPFLRLMGIQSMSEMFIPARQFLVLRALGAPAYVVSLALQGIFR 272
Query: 281 GFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRT 340
GFKDT+TPV+CLG+GNF AVF+FP+ +Y F++GV GAAIS+V SQY V +LM+ LNKR
Sbjct: 273 GFKDTKTPVYCLGIGNFLAVFLFPLFIYKFRMGVAGAAISSVISQYTVAILMLILLNKRV 332
Query: 341 ILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLS 400
IL P + +L FGDYL+SGG++LGRTL+ ++T+T++TS+AARQG AMAAHQIC+QVWL+
Sbjct: 333 ILLPPKIGSLKFGDYLKSGGFVLGRTLSVLVTMTVATSMAARQGVFAMAAHQICMQVWLA 392
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
VS+L DA A+SGQALIASS +K D+ VKE+T F LK G+ TG+ LA++LG SF+ +A L
Sbjct: 393 VSLLTDALASSGQALIASSASKRDFEGVKEVTTFVLKIGVVTGIALAIVLGMSFSSIAGL 452
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLL 520
F+ D +VL IVR G+LFV+A+QP+TA+A+IFDGLHYG+SDF YAA SMM VG ISS F+L
Sbjct: 453 FSKDPEVLRIVRKGVLFVAATQPITALAFIFDGLHYGMSDFPYAACSMMVVGGISSAFML 512
Query: 521 YAPRVFGLSAVWWGLTLFMSLRVAAGYFRLLSKNGPWWFLQKHMPKL 567
YAP GLS VW GL++FM LR+ AG+ RL+ + GPWWF+ +L
Sbjct: 513 YAPAGLGLSGVWVGLSMFMGLRMVAGFSRLMWRKGPWWFMHTSDKRL 559
>sp|Q84K71|MATE2_ARATH MATE efflux family protein 2, chloroplastic OS=Arabidopsis thaliana
GN=DTX44 PE=2 SV=1
Length = 521
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 304/441 (68%), Gaps = 13/441 (2%)
Query: 128 EPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKD 187
+P+ L++TA++G +G ELA+ GVS S+FN++SK+FN+PLL+V TSFVAE+ + ++ D
Sbjct: 94 DPITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDD 153
Query: 188 STSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISS 247
+ S T +K+LPSVST+LVLA +GI EA+A+ GS +D+M I
Sbjct: 154 NDSIE-------------TSKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVMAIPF 200
Query: 248 ASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLM 307
S MRIPA++FL LRA GAP +V++LA QG FRGFKDT TP++ + GN + P+L+
Sbjct: 201 DSPMRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAVLDPILI 260
Query: 308 YYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLLGRTL 367
+ G++GAA +TV S+Y++ +++W LN+ +L P +K YL+SGG L+GRT+
Sbjct: 261 FVLGFGISGAAAATVISEYLIAFILLWKLNENVVLLSPQIKVGRANQYLKSGGLLIGRTV 320
Query: 368 AAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNT 427
A ++ TL+TS+AA+ G MA HQI L++WL+VS+L DA A + Q+L+A+++++G+Y
Sbjct: 321 ALLVPFTLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQ 380
Query: 428 VKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLLFVSASQPVTAV 487
+E+ L+ GL TG LA +L +F ++LFT+D++VL I SG LFV+ SQPV A+
Sbjct: 381 AREVLFGVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNAL 440
Query: 488 AYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWGLTLFMSLRVAAGY 547
A++ DGL+YGVSDF +AAYSM+ VG ISS+F+L A FGL+ +W GL LFM+LR+ AG
Sbjct: 441 AFVLDGLYYGVSDFGFAAYSMVIVGFISSLFMLVAAPTFGLAGIWTGLFLFMALRLVAGA 500
Query: 548 FRLLSKNGPWWFLQKHMPKLE 568
+RL ++ GPW L K E
Sbjct: 501 WRLGTRTGPWKMLWSAPEKPE 521
>sp|Q9SYD6|MATE1_ARATH MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE PE=2
SV=2
Length = 515
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/465 (40%), Positives = 296/465 (63%), Gaps = 31/465 (6%)
Query: 128 EPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKD 187
+P+A L++TA+IG++GP+ELA+ GVS ++FN +S++ PL+S+ TSFVAE+ + SS +D
Sbjct: 50 DPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSITTSFVAEEDACSSQQD 109
Query: 188 STSD-SSCPNVSYNGCDEST------------------------------DRKLLPSVST 216
+ D C + N E T ++ +PS S+
Sbjct: 110 TVRDHKECIEIGINNPTEETIELIPEKHKDSLSDEFKTSSSIFSISKPPAKKRNIPSASS 169
Query: 217 ALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQ 276
AL++ +G+ +A+ + + L MG+ S M P+QR+LSLR++GAPAV+LSLA Q
Sbjct: 170 ALIIGGVLGLFQAVFLISAAKPLLSFMGVKHDSPMMRPSQRYLSLRSLGAPAVLLSLAAQ 229
Query: 277 GIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYL 336
G+FRGFKDT TP+F +G+ + + + P+ ++ F+LGVTGAA + V SQY++ +++W L
Sbjct: 230 GVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVFRLGVTGAATAHVISQYLMCGILLWKL 289
Query: 337 NKRTILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQ 396
+ + + K+L F ++++G LL R +A +TLS S+AAR+G+ +MAA Q+CLQ
Sbjct: 290 MGQVDIFNMSTKHLQFCRFMKNGFLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQ 349
Query: 397 VWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNY 456
VWL+ S+LAD A +GQA++AS+FAK DY L+ GL G LAVILGA ++
Sbjct: 350 VWLATSLLADGYAVAGQAILASAFAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHF 409
Query: 457 LATLFTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISS 516
A +FT D +VL ++ GL FV+ +QP+ A+A++FDG+++G SDF YAA S++ V +S
Sbjct: 410 GARVFTKDDKVLHLISIGLPFVAGTQPINALAFVFDGVNFGASDFGYAAASLVMVAIVSI 469
Query: 517 VFLLYAPRVFGLSAVWWGLTLFMSLRVAAGYFRLLSKNGPWWFLQ 561
+ LL+ G +W+GLT++MSLR A G++R+ + GPW FL+
Sbjct: 470 LCLLFLSSTHGFIGLWFGLTIYMSLRAAVGFWRIGTGTGPWSFLR 514
>sp|Q9SFB0|FRD3_ARATH MATE efflux family protein FRD3 OS=Arabidopsis thaliana GN=FRD3
PE=1 SV=1
Length = 526
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/463 (38%), Positives = 286/463 (61%), Gaps = 34/463 (7%)
Query: 133 LMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAED------------- 179
L++TA++GRLG ++LA+ GVS +IFN S++ PL+S+ TSFVAE+
Sbjct: 56 LIDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLTTSFVAEEDTMEKMKEEANKA 115
Query: 180 -----------------ISRSSSKDSTSDSS--CPNVSYNGCDEST--DRKLLPSVSTAL 218
IS +S D+ P+ N ++S +++ + + STA+
Sbjct: 116 NLVHAETILVQDSLEKGISSPTSNDTNQPQQPPAPDTKSNSGNKSNKKEKRTIRTASTAM 175
Query: 219 VLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGI 278
+L L +G+++A+ + F S L L +MG+ S M PA ++LS+RA+GAPA++LSLA+QGI
Sbjct: 176 ILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQGI 235
Query: 279 FRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNK 338
FRGFKDT+TP+F + + + + P+ ++ +LG+ GAAI+ V SQY +TL++ +L K
Sbjct: 236 FRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLAK 295
Query: 339 RTILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVW 398
+ L PN +L FG +L++G LL RT+A TL+ ++AAR G MAA QICLQVW
Sbjct: 296 KVNLIPPNFGDLQFGRFLKNGLLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVW 355
Query: 399 LSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLA 458
L+ S+L D A +GQA++A SFA+ DYN V + L+ G G+ L+V +G + A
Sbjct: 356 LTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGA 415
Query: 459 TLFTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVF 518
+F+ D V+ ++ G+ F++A+QP+ ++A++ DG+++G SDF+Y AYSM+ V AIS
Sbjct: 416 GVFSKDPAVIHLMAIGIPFIAATQPINSLAFVLDGVNFGASDFAYTAYSMVGVAAISIAA 475
Query: 519 LLYAPRVFGLSAVWWGLTLFMSLRVAAGYFRLLSKNGPWWFLQ 561
++Y + G +W LT++M+LR G R+ + GPW FL+
Sbjct: 476 VIYMAKTNGFIGIWIALTIYMALRAITGIARMATGTGPWRFLR 518
>sp|Q8W4G3|MATE4_ARATH MATE efflux family protein 4, chloroplastic OS=Arabidopsis thaliana
GN=DTX46 PE=2 SV=1
Length = 559
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 198/455 (43%), Gaps = 42/455 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
+++M + PA P+ L++TA IG+ LELA+ G +T I + L F LSVA
Sbjct: 118 EIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYLCYTFM--FLSVA 175
Query: 173 TS-FVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGI-LEAL 230
TS VA ++R DE + +S L + L G+ + L
Sbjct: 176 TSNLVATSLARQDK-----------------DEVQHQ-----ISILLFIGLACGVTMMVL 213
Query: 231 AMYFGSGLFLDIMGISSASSMRIP-AQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPV 289
FGS G+ +A +P A +++ +R + PAV++ Q G KD+ P+
Sbjct: 214 TRLFGSWALTAFTGVKNAD--IVPAANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPL 271
Query: 290 FCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTI----LSIP 345
L + + +L + G+ GAA +T+ SQ + +M+ LNK+ +P
Sbjct: 272 KALAVASAINGVGDVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVP 331
Query: 346 NMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLA 405
+ L L + ++ ++ V+ TL A G +AAHQ+ LQ++ ++
Sbjct: 332 SPSELLTIFGLAAPVFI--TMMSKVLFYTLLVYFATSMGTNIIAAHQVMLQIYTMSTVWG 389
Query: 406 DAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVI---LGASFNYL-ATLF 461
+ + + Q+ + + N K LK+ + G TL ++ +G + +L +F
Sbjct: 390 EPLSQTAQSFMPELLFGINRNLPK--ARVLLKSLVIIGATLGIVVGTIGTAVPWLFPGIF 447
Query: 462 TSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFL-L 520
T D V + ++ + +T + +G D Y + SM A++ + L L
Sbjct: 448 TRDKVVTSEMHKVIIPYFLALSITPSTHSLEGTLLAGRDLRYISLSMTGCLAVAGLLLML 507
Query: 521 YAPRVFGLSAVWWGLTLFMSLRVAAGYFRLLSKNG 555
+ FGL W+ L F R + FRLLS++G
Sbjct: 508 LSNGGFGLRGCWYALVGFQWARFSLSLFRLLSRDG 542
>sp|P28303|DINF_ECOLI DNA-damage-inducible protein F OS=Escherichia coli (strain K12)
GN=dinF PE=2 SV=1
Length = 459
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 13/329 (3%)
Query: 238 LFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNF 297
L L I+G S A + A+RFL +R + APA + +L + G G + R PV L +GN
Sbjct: 131 LALHIVGGSEAVLEQ--ARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNI 188
Query: 298 SAVFMFPMLMYYFKLGVTGAAISTVGSQY---MVTLLMIWYLNKRTILSIPNMKNLHFGD 354
+ + L+ + V GAA++TV ++Y ++ LLM+ + K +S +K G+
Sbjct: 189 LNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEMLKTAWRGN 248
Query: 355 YLRSGGY---LLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAAS 411
+ R ++ R+L + T + AR G+ +A + + + + + D A +
Sbjct: 249 FRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAYALDGFAYA 308
Query: 412 GQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIV 471
+A ++ D + + ++ A + + +V+ + ++ L TS TQ+ +
Sbjct: 309 VEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLA 368
Query: 472 RSGLLFVSASQPVTAV-AYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSA 530
L++ PV V Y+ DG+ G + + SM A ++ LL P G A
Sbjct: 369 DRYLIW-QVILPVVGVWCYLLDGMFIGATRATEMRNSMAVAAAGFALTLLTLPW-LGNHA 426
Query: 531 VWWGLTLFMSLR--VAAGYFRLLSKNGPW 557
+W LT+F++LR A +R +NG W
Sbjct: 427 LWLALTVFLALRGLSLAAIWRRHWRNGTW 455
>sp|Q945F0|EDS5_ARATH Enhanced disease susceptibility 5 OS=Arabidopsis thaliana GN=EDS5
PE=2 SV=1
Length = 543
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 188/467 (40%), Gaps = 47/467 (10%)
Query: 103 SQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSK 162
QS + ++ +++ + PA+ P+ L++T IG+ +ELA+ G T + + +S
Sbjct: 92 KQSIWEQMK-EIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLCDHMSY 150
Query: 163 VFNIPLLSVATS-FVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLA 221
VF LSVATS VA +++ K++ S +
Sbjct: 151 VFM--FLSVATSNMVATSLAKQDKKEAQHQIS--------------------------VL 182
Query: 222 LTIGILEALAMYFGSGLF--LDIMGISSASSMRI--PAQRFLSLRAIGAPAVVLSLAIQG 277
L IG++ L M + LF + + ++ I A +++ +R + P +++ L Q
Sbjct: 183 LFIGLVCGLMMLLLTRLFGPWAVTAFTRGKNIEIVPAANKYIQIRGLAWPFILVGLVAQS 242
Query: 278 IFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLN 337
G K++ P+ L +L + G+ GAA +T SQ + +M+ LN
Sbjct: 243 ASLGMKNSWGPLKALAAATIINGLGDTILCLFLGQGIAGAAWATTASQIVSAYMMMDSLN 302
Query: 338 KRTI----LSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQI 393
K +IP+ + L L + ++ + + + A G +AAHQ+
Sbjct: 303 KEGYNAYSFAIPSPQELWKISALAAPVFI--SIFSKIAFYSFIIYCATSMGTHVLAAHQV 360
Query: 394 CLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGAS 453
Q + ++ + + + Q+ + + N K T LK+ + G TL ++LG
Sbjct: 361 MAQTYRMCNVWGEPLSQTAQSFMPEMLYGANRNLPKART--LLKSLMIIGATLGLVLGVI 418
Query: 454 FNYLATLF----TSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMM 509
+ LF T D ++ + L+ + + +G D + + M
Sbjct: 419 GTAVPGLFPGVYTHDKVIISEMHRLLIPFFMALSALPMTVSLEGTLLAGRDLKFVSSVMS 478
Query: 510 AVGAISSVFLLYAPRV-FGLSAVWWGLTLFMSLRVAAGYFRLLSKNG 555
+ I + L++ R +GL W+ L F R RLLS G
Sbjct: 479 SSFIIGCLTLMFVTRSGYGLLGCWFVLVGFQWGRFGLYLRRLLSPGG 525
>sp|Q58119|Y709_METJA Uncharacterized transporter MJ0709 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0709 PE=3 SV=1
Length = 450
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 169/388 (43%), Gaps = 61/388 (15%)
Query: 108 QNVQLDL-------IMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNIL 160
+NV++ L I +S P I IE + L+++ ++ LG LA+ G S F IL
Sbjct: 2 KNVEILLDDPKKAVIEVSKPIIVATFIESIYSLVDSIWVSGLGADALAAVGAS---FPIL 58
Query: 161 SKVFNIPL-LSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALV 219
++ + LS+ S I+R + ++ D+ + A++
Sbjct: 59 ISIYAVSWGLSIGIS---SGIARRVGAKNKEEA----------DKVANH--------AII 97
Query: 220 LALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIF 279
LAL GIL +A+Y +MG + + A ++ S+ +G + A+ GIF
Sbjct: 98 LALIAGILYIIAVYPNLDTLFSLMG--TYGDCKSLAIKYSSILVLGTVIFTICDALYGIF 155
Query: 280 RGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIW--YLN 337
RG +T+ + +G + + + P+ +Y LG++GA+ +T+ + + L++ + ++
Sbjct: 156 RGEGNTKIVMIASVIGTLTNIILDPIFIYMLNLGISGASYATLIAIIISLLILAYELFIK 215
Query: 338 KRTILSI------PNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAH 391
K +++ P++K + D +R G +A++ IT++ S + M
Sbjct: 216 KSCYVTVKLSKFKPDLKII--ADLIRVG------IPSALIEITVAVSFFIMTSIIMMVGD 267
Query: 392 QICLQVWLS---------VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFT 442
L V+ + ML A A+ ++I +++ + +K + +K G+
Sbjct: 268 SRGLAVYTGALRITEFGFIPMLGLASGAT--SVIGATYGARSFEKLKTAYFYTIKIGVLM 325
Query: 443 GVTLAVILGASFNYLATLFTSDTQVLGI 470
+ + ++ LA LFT +GI
Sbjct: 326 EIIIVALIMLLSPILAYLFTYTKTSMGI 353
>sp|Q9WZS2|NORM_THEMA Probable multidrug resistance protein NorM OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=norM PE=3 SV=1
Length = 464
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 162/377 (42%), Gaps = 37/377 (9%)
Query: 104 QSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKV 163
+ V ++ +LI L+LPA+ ++ + + +TA++G ++ G+S +F ++ V
Sbjct: 12 KEEVPEIRKELIKLALPAMGENVLQMLFGMADTAFLGHYSWKAMSGVGLSNQVFWVVQVV 71
Query: 164 FNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALT 223
+A S + ++ +++ + + + ++++N ++ T ++L
Sbjct: 72 L------IAAS-MGATVTIANAIGAGNRKAVRSLAWNSV--------FLAIFTGVILTAL 116
Query: 224 IGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFK 283
+ + L +F ++ G +S A+ +L + G+ + + RG
Sbjct: 117 TPLSDVLI-----NIFPNLEGEIESS-----AKEYLKVILSGSMGFSIMAVFSAMLRGAG 166
Query: 284 DTRTPVFCLGLGNFSAVFM-FPMLMYYF---KLGVTGAAISTVGSQYMVTLLMIWYLNKR 339
DTRTP+ GL NF +F+ + M+ F ++GV GAA++T+ S+++ ++ + + KR
Sbjct: 167 DTRTPMIVTGLTNFLNIFLDYAMIFGKFGFPEMGVRGAAVATILSRFVGAGILTYVIFKR 226
Query: 340 TILSI------PNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQI 393
+ P + + LR G + + +I GA A A H+I
Sbjct: 227 EEFQLRKGLVPPKWSSQK--EILRVGFPTAIENFVFSTGVLMFANILLIAGAEAYAGHRI 284
Query: 394 CLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGAS 453
+ V M A + + L+ G+ V + L VT+ +I+
Sbjct: 285 GINVESLSFMPAFGISVAITTLVGRYNGMGNKEHVLGVIRQGWILSLLFQVTVGIIIFLF 344
Query: 454 FNYLATLFTSDTQVLGI 470
L +FTSD Q++ I
Sbjct: 345 PEPLIRIFTSDPQIIEI 361
>sp|P76352|YEEO_ECOLI Uncharacterized transporter YeeO OS=Escherichia coli (strain K12)
GN=yeeO PE=3 SV=3
Length = 495
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 167/390 (42%), Gaps = 22/390 (5%)
Query: 197 VSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQ 256
V+++ R + + + +++ L +L L +FG + +D + + + ++ A
Sbjct: 103 VAFSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQI-IDFVAGDATTEVKALAL 161
Query: 257 RFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMY----YFKL 312
+L L + PA ++L G RG +T+ P+ G N + + +L+Y + L
Sbjct: 162 TYLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGL 221
Query: 313 GVTGAAISTVGSQYMVTLLMIWYL----NKRTILSIPN-MKNLHFGDYLRSGGYLLGRTL 367
G GA + S+Y+ + ++W L N +S+ + K L+F G + ++
Sbjct: 222 GFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASV 281
Query: 368 AAVMTIT---LSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGD 424
+V+ + L+ A G +A + I + +++ A ++ + G
Sbjct: 282 ESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQ 341
Query: 425 YNTVK-EITH-FALKTGLFTGVTLAVILGASF-NYLATLFTSDTQVLGIVRSGLLFVSAS 481
+ ++ H F L T G+T L A F +A+ +T D QV +V + +
Sbjct: 342 IAQAEIQLRHVFWLST---LGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALF 398
Query: 482 QPVTAVAYIFDGLHYGVSDFSYAAY-SMMAVGAISSV--FLLYAPRVFGLSAVWWGLTLF 538
P+ + +++ G D YA + SM+++ V ++L +G+ VW G+
Sbjct: 399 MPIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMFAD 458
Query: 539 MSLRVAAGYFRLLSKNGPWWFLQKHMPKLE 568
++R Y+R+++ W + + K E
Sbjct: 459 WAVRAVLFYWRMVTGRWLWKYPRPEPQKCE 488
>sp|P45272|HMRM_HAEIN Multidrug resistance protein HmrM OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hmrM PE=3 SV=1
Length = 464
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 152/376 (40%), Gaps = 54/376 (14%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
LI +SLP + Q + L +T GR+ ++A+ + SI+ +PL+
Sbjct: 15 KLIKISLPILLAQIAQNSMGLADTIMAGRVSSTDMAAISIGASIW--------MPLM--- 63
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSY-NGCDESTDRKLLPSVSTALVLALTIGILEALA 231
F + + + P +SY NG + ++ V + L L + I L
Sbjct: 64 --FFGQGLLLALP---------PTISYLNGSGQ--HHRIAHQVRQGIWLVLGVSIPLGLL 110
Query: 232 MYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFC 291
+YF + + + S M A+ +L G PA ++ + + + G + T+ +
Sbjct: 111 IYFCE---IPLQYMQMESKMSDLARDYLHAMLWGLPAYLMLINFRCLNDGIEKTKPAMVI 167
Query: 292 LGLG---NFSAVFMFPMLMYYFKLGV-----TGAAISTVGSQYMVTLLMIWYLNKRT--- 340
LG N ++F Y K G+ G I+T + + L+MI+Y T
Sbjct: 168 TFLGLLINIPLNYIF----IYGKFGMPAFGAVGCGIATAIVNWAMCLMMIFYSYTNTQER 223
Query: 341 -------ILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQI 393
++ +PN K L LR G + V L++ + + GA +A+HQI
Sbjct: 224 SLKVFSQLIEMPNPKTLK--KLLRLGLPIAIAICCEVALYALTSLMLSPLGATIVASHQI 281
Query: 394 CLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGAS 453
L + M + + L+ + G K+I + AL GL + A+I
Sbjct: 282 TLNTSSFIFMFPMSIGMATTILVGQALGAGSPQNAKKIGYAALLLGLTVTIVTALI-TIF 340
Query: 454 FNY-LATLFTSDTQVL 468
F Y +A++F +D V+
Sbjct: 341 FRYEIASIFVTDEIVI 356
>sp|P54181|YPNP_BACSU Probable multidrug resistance protein YpnP OS=Bacillus subtilis
(strain 168) GN=ypnP PE=3 SV=1
Length = 445
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 38/247 (15%)
Query: 109 NVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGV--STSIFNILSKVFNI 166
NV L++ S+P + G A++ Q +++ +IG L + A ST + +LS +
Sbjct: 10 NVLKQLVLFSMPIMLGNALQVSFQFIDSLWIGNLLGAKALGAAAVSSTIVLTVLSFILG- 68
Query: 167 PLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGI 226
L+ AT + +S+ KD D K + S A V+ LT
Sbjct: 69 --LNNATLTI---LSQQKGKD-------------------DIKGMASYINAFVVLLT--- 101
Query: 227 LEALAMYFGSGLFLDIMGI----SSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGF 282
L++ FG+ F + + SM A+ +L ++ IG + I + R
Sbjct: 102 --GLSIGFGAAGFFLSELLLRLLKTPESMIPLAETYLQIQFIGILFLFGYNFISTVLRAL 159
Query: 283 KDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTIL 342
D++TP+ + + P+ + F++G+ GAA ST+ SQ + L ++Y+ K ++
Sbjct: 160 GDSKTPLRFIAFAVVLNTVLAPLFISVFRMGIAGAAYSTILSQGIAFLYGLFYVIKHKLV 219
Query: 343 --SIPNM 347
SIP M
Sbjct: 220 PFSIPRM 226
>sp|Q73BB8|NORM_BACC1 Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ATCC 10987) GN=norM PE=3 SV=1
Length = 454
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 174/440 (39%), Gaps = 91/440 (20%)
Query: 97 RKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSI 156
++++ SQ Q ++L P Q +T G P++LA + TSI
Sbjct: 2 KETSTFSQKLKQ-----FVLLFFPIFITQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSI 56
Query: 157 FNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVST 216
+ +S +L T VA+ + +D P V V
Sbjct: 57 WIPVSTGLT-GILMATTPIVAQLVGSKKKED------VPQV----------------VIQ 93
Query: 217 ALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQ 276
A+ LA+ + L +F L+ M + RI AQ FLS+ AIG ++ L
Sbjct: 94 AVYLAICASFVVMLIGFFAVTPILNGMRLEEPVE-RIAAQ-FLSIIAIG----IIPLFTY 147
Query: 277 GIFRGFKD----TRT---------PV-----FCLGLGNFSAVFMFPMLMYYFKLGVTGAA 318
+ RGF D TRT P+ + L G+F FP KLG GAA
Sbjct: 148 TVLRGFIDALGKTRTTMIITLLSLPINVILNYVLIFGHFG----FP------KLGGVGAA 197
Query: 319 ISTVGSQYMVTLLMIWYL-NKRTILSIPNMKNLH------FGDYLRSG-----GYLLGRT 366
I++ + + + ++ + + K S K L+ + ++L+ G +
Sbjct: 198 IASTATYWCILIITVMIIRTKEPFASFHIFKQLYRPSLSSWKEFLKLGVPIGFAIFFETS 257
Query: 367 LAAVMTITLS----TSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAK 422
+ A +T+ +S T+IAA Q A+ A+ L ++ L+ A A + IA F
Sbjct: 258 IFAAVTLMMSNFSTTTIAAHQAAMNFAS-------LLYMTPLSLAMAMT----IAVGFEV 306
Query: 423 G--DYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLLFVSA 480
G YN K+ + L + +++L + +A+++T+D QV + + L+F
Sbjct: 307 GAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDDEIASIYTTDIQVHHLAKEFLIFAIL 366
Query: 481 SQPVTAVAYIFDGLHYGVSD 500
Q A+A G G D
Sbjct: 367 FQISDAIATPVQGALRGYKD 386
>sp|Q81T85|NORM_BACAN Probable multidrug resistance protein NorM OS=Bacillus anthracis
GN=norM PE=3 SV=1
Length = 453
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 176/444 (39%), Gaps = 91/444 (20%)
Query: 97 RKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSI 156
+++ + SQ Q ++L P Q +T G P++LA + TSI
Sbjct: 2 KETNSFSQKLKQ-----FVLLFFPIFVTQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSI 56
Query: 157 FNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVST 216
+ +S +L T VA+ + +D P+V +
Sbjct: 57 WIPVSTGLT-GILMATTPIVAQLVGSKKKED------VPHV----------------IIQ 93
Query: 217 ALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQ 276
A+ LA+ + L F L+ M + RI AQ FLS+ AIG ++ L
Sbjct: 94 AVYLAICASFVVILIGLFTVTPILNGMRLEEPVE-RIAAQ-FLSIIAIG----IIPLFTY 147
Query: 277 GIFRGFKD----TRT---------PV-----FCLGLGNFSAVFMFPMLMYYFKLGVTGAA 318
+ RGF D TRT P+ + L GNF FP KLG GAA
Sbjct: 148 TVLRGFIDALGKTRTTMIITLLSLPINVVLNYVLIFGNFG----FP------KLGGVGAA 197
Query: 319 ISTVGSQYMVTLLMIWYL-NKRTILSIPNMKNLH------FGDYLRSG-----GYLLGRT 366
I++ + + + ++ + + K S K L+ + ++L+ G +
Sbjct: 198 IASAATYWCILIITVMIIRTKEPFASFNIFKQLYRPSLSSWKEFLKLGVPIGFAIFFETS 257
Query: 367 LAAVMTITLS----TSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAK 422
+ A +T+ +S T+IAA Q A+ A+ L ++ L+ A A + IA F
Sbjct: 258 IFAAVTLMMSNFSTTTIAAHQAAMNFAS-------LLYMTPLSLAMAMT----IAVGFEV 306
Query: 423 G--DYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLLFVSA 480
G YN K+ + L + +++L + +A+++T+D QV + + L+F
Sbjct: 307 GAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDDEIASIYTTDIQVHHLAKEFLIFAIL 366
Query: 481 SQPVTAVAYIFDGLHYGVSDFSYA 504
Q A+A G G D + A
Sbjct: 367 FQISDAIATPVQGALRGYKDVNVA 390
>sp|Q6HLG9|NORM_BACHK Probable multidrug resistance protein NorM OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=norM
PE=3 SV=1
Length = 453
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 164/406 (40%), Gaps = 86/406 (21%)
Query: 135 ETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSC 194
+T G P++LA + TSI+ +S +L T VA+ + +D
Sbjct: 35 DTTMSGHASPIDLAGVAIGTSIWIPVSTGLT-GILMATTPIVAQLVGSKKKED------V 87
Query: 195 PNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIP 254
P+V V A+ LA+ + L F L+ M + RI
Sbjct: 88 PHV----------------VIQAVYLAICASFVVILIGLFTVTPILNGMRLEEPVE-RIA 130
Query: 255 AQRFLSLRAIGAPAVVLSLAIQGIFRGFKD----TRT---------PV-----FCLGLGN 296
AQ FLS+ AIG ++ L + RGF D TRT P+ + L GN
Sbjct: 131 AQ-FLSIIAIG----IIPLFTYTVLRGFIDALGKTRTTMIITLLSLPINVVLNYVLIFGN 185
Query: 297 FSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYL-NKRTILSIPNMKNLH---- 351
F FP KLG GAAI++ + + + ++ + + K S K L+
Sbjct: 186 FG----FP------KLGGVGAAIASAATYWCILIITVMIIRTKEPFASFNIFKQLYRPSL 235
Query: 352 --FGDYLRSG-----GYLLGRTLAAVMTITLS----TSIAARQGALAMAAHQICLQVWLS 400
+ ++L+ G ++ A +T+ +S T+IAA Q A+ A+ L
Sbjct: 236 SSWKEFLKLGVPIGFAIFFETSIFAAVTLMMSNFSTTTIAAHQAAMNFAS-------LLY 288
Query: 401 VSMLADAQAASGQALIASSFAKG--DYNTVKEITHFALKTGLFTGVTLAVILGASFNYLA 458
++ L+ A A + IA F G YN K+ + L + +++L + +A
Sbjct: 289 MTPLSLAMAMT----IAVGFEVGAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDDEIA 344
Query: 459 TLFTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFSYA 504
+++T+D QV + + L+F Q A+A G G D + A
Sbjct: 345 SIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVA 390
>sp|Q8K0H1|S47A1_MOUSE Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1
PE=1 SV=2
Length = 567
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 89/211 (42%), Gaps = 44/211 (20%)
Query: 305 MLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTI---------------------LS 343
+ +Y+ LGV G+A++ SQ+ + + + Y+ R + L+
Sbjct: 204 VFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLA 263
Query: 344 IPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSM 403
IP+M L + Y +G L+ ++ G + + A I ++ + V M
Sbjct: 264 IPSMLML----CIEWWAYEVGSFLSGIL------------GMVELGAQSITYELAIIVYM 307
Query: 404 LADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTS 463
+ + + + ++ G+ + K+ + +L VT V+L + + +FT+
Sbjct: 308 IPSGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTT 367
Query: 464 DTQVLGIVRSGLLFVSASQPVTAVAYIFDGL 494
D ++ +V + P+ AV+++F+GL
Sbjct: 368 DRDIVALVAQVI-------PIYAVSHLFEGL 391
>sp|Q65SY9|NORM_MANSM Probable multidrug resistance protein NorM OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=norM PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 26/263 (9%)
Query: 257 RFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLG---NFSAVFMFPMLMYYFKLG 313
++L G PA +L + + + G T+ + +G N ++F Y KLG
Sbjct: 134 KYLHAMLFGLPAYLLLVNFRCLNDGLAKTKPAMIITLIGLLLNIPLNYIF----IYGKLG 189
Query: 314 V-----TGAAISTVGSQYMVTLLMIWYL----NKR------TILSIPNMKNLHFGDYLRS 358
V G I+T +++ +LMI Y N+R I+ +PN L +
Sbjct: 190 VPAFGAVGCGIATTIVNWIMCILMISYTKSARNQRDLKVFENIIELPNPATLK--KLFKL 247
Query: 359 GGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIAS 418
G + + V L++ + + G A+A+HQI L + ML + + L+
Sbjct: 248 GLPIAIAICSEVALFALTSLLLSPLGTNAVASHQIALNTSSFIFMLPMSLGMATTILVGQ 307
Query: 419 SFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNY-LATLFTSDTQVLGIVRSGLLF 477
S + K+I++ AL GL T TL L Y +A +F DT+V+ + S LL
Sbjct: 308 SLGERSPLKAKDISYVALFIGLATA-TLTAFLTVVLRYQIAGIFVKDTEVISLAASLLLL 366
Query: 478 VSASQPVTAVAYIFDGLHYGVSD 500
+ Q AV + G G D
Sbjct: 367 NALYQFSDAVQVVVGGALRGYKD 389
>sp|A1JPA1|MDTK_YERE8 Multidrug resistance protein MdtK OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=mdtK PE=3
SV=1
Length = 457
Score = 39.3 bits (90), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 181/479 (37%), Gaps = 63/479 (13%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG ++ V LA + +L + +
Sbjct: 69 TPTVAQ--------------------LNGSGRRN--QIAHQVRQGFWLAFCVSVLIMVVI 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + + I + + A FL GAP + ++ G T+ P +
Sbjct: 107 YNSDHIIMRMHNIDPVLADK--AVGFLHAIMWGAPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFIGLLVNIPINYIFIYGKFGAPALGGVGCGVATGTVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R GG L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLGGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + + ++ GL A+ ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGSVDDARVAAYTSIAVGLMLACVTAIFTVVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD------FSYAAYSMMAVGAI 514
+ +V+ + +L + Q A+ I G+ G D ++ AY ++ +
Sbjct: 344 YNKTPEVVVMASHLMLLAALYQLSDAIQVIGSGVLRGYKDTRSIFFITFTAYWLL---GL 400
Query: 515 SSVFLL----YAPRVFGLSAVWWGLT-------LFMSLRVAAGYFRLLSKNGPWWFLQK 562
S +LL Y G S W G + M+LR+ R L K + LQK
Sbjct: 401 PSGYLLGLTDYIVPAMGPSGFWIGFVIGLTSAAILMALRI-----RWLQKQPSAFILQK 454
>sp|O34474|YOEA_BACSU Probable multidrug resistance protein YoeA OS=Bacillus subtilis
(strain 168) GN=yoeA PE=3 SV=2
Length = 463
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 207 DRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQ-RFLSLRAIG 265
+ +L V T L +G++ A+ GS LDI+ + I + +
Sbjct: 93 EERLKAVVGTTLTFTFLLGVVLAV---IGSIFTLDILRLMGTPENVIHVSANYARILFYA 149
Query: 266 APAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPML---MYYF-KLGVTGAAIST 321
P + L A RG D++TP + L + + + P+L M+ F KLG+ G+A +T
Sbjct: 150 MPFMFLYFAYTTFLRGTGDSKTPFYTLIVSTVINIALLPVLILGMFGFPKLGIYGSAYAT 209
Query: 322 VGSQYMVTLLMIWYLNKR 339
V S L+++ YL KR
Sbjct: 210 VISTIATFLVLMVYLRKR 227
>sp|Q5RFD2|S47A1_PONAB Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1
PE=2 SV=1
Length = 570
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 91/211 (43%), Gaps = 44/211 (20%)
Query: 305 MLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTI---------------------LS 343
+ ++ LG G+A++ + SQY + LL+ +Y+ + + L+
Sbjct: 204 LFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLA 263
Query: 344 IPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSM 403
+P+M L + Y +G L+ ++ G + + A I ++ + V M
Sbjct: 264 VPSMLML----CMEWWAYEVGSFLSGIL------------GMVELGAQSIVYELAIIVYM 307
Query: 404 LADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTS 463
+ + + + ++ GD ++ + +L + V +V+L + +++ +FT+
Sbjct: 308 VPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTT 367
Query: 464 DTQVLGIVRSGLLFVSASQPVTAVAYIFDGL 494
D ++ + V+ P+ AV+++F+ L
Sbjct: 368 DRDIINL-------VAQVVPIYAVSHLFEAL 391
>sp|Q9I3Y3|PMPM_PSEAE Multidrug resistance protein PmpM OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pmpM
PE=3 SV=1
Length = 477
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 31/234 (13%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
+L+ L+ P + Q ++ GR P +LA+ + SI+ IP+ +
Sbjct: 20 ELLTLAAPIMIAQLATTAMGFVDAVMAGRASPHDLAAVALGNSIW--------IPMFLLM 71
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T + ++ + + D P P V AL LAL IG L +
Sbjct: 72 TGTLLATTAKVAQRHGAGDQ--PGTG-------------PLVRQALWLALLIGPLSGAVL 116
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
++ S L +M + + P+ +L A+G PA L ++ G TR P L
Sbjct: 117 WWLSEPILGLMKVRP--ELIGPSLLYLKGIALGFPAAALYHVLRCYTNGLGRTR-PSMVL 173
Query: 293 GLGNF--SAVFMFPMLMYYF---KLGVTGAAISTVGSQYMVTLLMIWYLNKRTI 341
G+G + + ++ +F K+G G +T + + L M++++NK +I
Sbjct: 174 GIGGLLLNIPINYALIYGHFGMPKMGGPGCGWATGSVMWFMFLGMLFWVNKASI 227
>sp|Q9F5N7|NORM_BURVI Multidrug resistance protein NorM OS=Burkholderia vietnamiensis
GN=norM PE=3 SV=1
Length = 462
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 125/311 (40%), Gaps = 27/311 (8%)
Query: 92 LSNESRKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAG 151
+S+ A + + +D L+ P Q + + +T +G LGP LA+ G
Sbjct: 1 MSHSGLTRTAAAPPSLSRHAVDTARLAAPLAIAQLSQMAMSVTDTVLLGSLGPDSLAAGG 60
Query: 152 VSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLL 211
+ + F ++ V + +S + ++ + ++ P++ + G S +
Sbjct: 61 LGANFFFVIVTVLQ-------GVLSSVSVSVAHARGAQAEHRVPHIYWTGFVLSVLLAIP 113
Query: 212 PSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVL 271
V+ +L L + E + G + I+ ++ S+ L AIGA +L
Sbjct: 114 AVVALSLSEPLLLMFHEPPTLAQHVGEYTGILRFAALGSLIGVGLMRAFLPAIGAARRLL 173
Query: 272 SLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLL 331
++I GI G L G + P +LG G+A++T + ++
Sbjct: 174 WVSIGGI--GVNA------VLNYGLIHGAYGLP------RLGFLGSAVATTITIWLTAFA 219
Query: 332 MIWYLNKRT----ILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSI-AARQGAL 386
+IW L+ R +S K G+ L G+ + T T+ L+T + GA
Sbjct: 220 LIWLLHGRARFRHFVSAARPKLPMMGE-LIGIGWPVAITYGVESTLFLATGLTVGVLGAT 278
Query: 387 AMAAHQICLQV 397
A+AAHQI L V
Sbjct: 279 ALAAHQIALNV 289
>sp|Q63DZ4|NORM_BACCZ Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ZK / E33L) GN=norM PE=3 SV=1
Length = 453
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 165/406 (40%), Gaps = 86/406 (21%)
Query: 135 ETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSC 194
+T G P++LA + TSI+ +S +L T VA+ + +D
Sbjct: 35 DTTMSGHASPIDLAGVAIGTSIWIPVSTGLT-GILMATTPIVAQLVGSKKKED------V 87
Query: 195 PNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIP 254
P+V V A+ LA+ + L F L+ M + RI
Sbjct: 88 PHV----------------VIQAVYLAICASFVVILIGLFTVTPILNGMRLEEPVE-RIA 130
Query: 255 AQRFLSLRAIGAPAVVLSLAIQGIFRGFKD----TRT---------PV-----FCLGLGN 296
AQ FLS+ AIG ++ L + RGF D TRT P+ + L GN
Sbjct: 131 AQ-FLSIIAIG----IIPLFTYTVLRGFIDALGKTRTTMIITLLSLPINVILNYLLIFGN 185
Query: 297 FSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLN-KRTILSIPNMKNLH---- 351
F FP KLG GAAI++ + + + ++ + ++ K S K+L+
Sbjct: 186 FG----FP------KLGGVGAAIASTATYWCILIITVIIIHTKEPFASFNIFKHLYRPSL 235
Query: 352 --FGDYLRSG-----GYLLGRTLAAVMTITLS----TSIAARQGALAMAAHQICLQVWLS 400
+ +L+ G ++ A +T+ +S T+IAA Q A+ A+ L
Sbjct: 236 SSWKAFLKLGVPIGFAIFFETSIFAAVTLMMSNFSTTTIAAHQAAMNFAS-------LLY 288
Query: 401 VSMLADAQAASGQALIASSFAKG--DYNTVKEITHFALKTGLFTGVTLAVILGASFNYLA 458
++ L+ A A + IA F G YN K+ + L + +++L N +A
Sbjct: 289 MTPLSLAMAMT----IAVGFEVGAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDNEIA 344
Query: 459 TLFTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFSYA 504
+++T+D QV + + L+F Q A+A G G D + A
Sbjct: 345 SIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVA 390
>sp|Q5HIW0|MEPA_STAAC Multidrug export protein MepA OS=Staphylococcus aureus (strain COL)
GN=mepA PE=3 SV=1
Length = 451
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 304 PMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLL 363
P+L++ F L V GAA+ T S L I Y K + + N+K + S + +
Sbjct: 184 PILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEIFKI 243
Query: 364 GRTLAAVMTITLSTS------IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 417
G A +M+I + + A G A+A++ I ++ ++ LIA
Sbjct: 244 GIP-AFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPLIA 302
Query: 418 SSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASF---NYLATLFTSDTQVLGIVRSG 474
+F + +K++ + + GV V + A F +++ LFT+D ++ +
Sbjct: 303 YNF-MANKGRMKDVIKAVIMS---IGVIFVVCMSAVFTIGHHMVGLFTTDQAIVEMATFI 358
Query: 475 LLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWG 534
L AS + + ++F G+ A + GAI L +FGL+ V W
Sbjct: 359 LKVTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWS 418
Query: 535 LTLFMSL 541
L + SL
Sbjct: 419 LLIAESL 425
>sp|Q2G140|MEPA_STAA8 Multidrug export protein MepA OS=Staphylococcus aureus (strain NCTC
8325) GN=mepA PE=1 SV=1
Length = 451
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 304 PMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLL 363
P+L++ F L V GAA+ T S L I Y K + + N+K + S + +
Sbjct: 184 PILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEIFKI 243
Query: 364 GRTLAAVMTITLSTS------IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 417
G A +M+I + + A G A+A++ I ++ ++ LIA
Sbjct: 244 GIP-AFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPLIA 302
Query: 418 SSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASF---NYLATLFTSDTQVLGIVRSG 474
+F + +K++ + + GV V + A F +++ LFT+D ++ +
Sbjct: 303 YNF-MANKGRMKDVIKAVIMS---IGVIFVVCMSAVFTIGHHMVGLFTTDQAIVEMATFI 358
Query: 475 LLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWG 534
L AS + + ++F G+ A + GAI L +FGL+ V W
Sbjct: 359 LKVTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWS 418
Query: 535 LTLFMSL 541
L + SL
Sbjct: 419 LLIAESL 425
>sp|Q2FJS9|MEPA_STAA3 Multidrug export protein MepA OS=Staphylococcus aureus (strain
USA300) GN=mepA PE=3 SV=1
Length = 451
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 304 PMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLL 363
P+L++ F L V GAA+ T S L I Y K + + N+K + S + +
Sbjct: 184 PILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEIFKI 243
Query: 364 GRTLAAVMTITLSTS------IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 417
G A +M+I + + A G A+A++ I ++ ++ LIA
Sbjct: 244 GIP-AFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPLIA 302
Query: 418 SSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASF---NYLATLFTSDTQVLGIVRSG 474
+F + +K++ + + GV V + A F +++ LFT+D ++ +
Sbjct: 303 YNF-MANKGRMKDVIKAVIMS---IGVIFVVCMSAVFTIGHHMVGLFTTDQAIVEMATFI 358
Query: 475 LLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWG 534
L AS + + ++F G+ A + GAI L +FGL+ V W
Sbjct: 359 LKVTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWS 418
Query: 535 LTLFMSL 541
L + SL
Sbjct: 419 LLIAESL 425
>sp|A7FHJ7|MDTK_YERP3 Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=mdtK PE=3 SV=1
Length = 457
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGSVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|A4IIS8|S47A1_XENTR Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis
GN=slc47a1 PE=2 SV=1
Length = 574
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 13/201 (6%)
Query: 297 FSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILS-----IPNMKNLH 351
F+A+F + +L+Y LGV G+A + SQ++ +L+ Y+ R + +
Sbjct: 211 FNALFNY-ILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEE 269
Query: 352 FGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAAS 411
+G ++R + +S +A G + +AA I QV + V ++ +
Sbjct: 270 WGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAIIYQVAIVVYLIPLGLCIA 329
Query: 412 GQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIV 471
G + G+ K L + ++L + +A +FTSD ++ +
Sbjct: 330 GSIRVGHGLGAGNTEQAKRSALVVLCMTELCALLSGILLATLKDVVAYIFTSDPNIVAL- 388
Query: 472 RSGLLFVSASQPVTAVAYIFD 492
VS PV + +FD
Sbjct: 389 ------VSYVLPVYSACLLFD 403
>sp|Q7A7N0|MEPA_STAAN Multidrug export protein MepA OS=Staphylococcus aureus (strain
N315) GN=mepA PE=1 SV=1
Length = 451
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 304 PMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLL 363
P+L++ F L V GAA+ T S L I Y K + + N+K + S + +
Sbjct: 184 PILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEIFKI 243
Query: 364 GRTLAAVMTITLSTS------IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 417
G A +M+I + + A G A+A++ I ++ ++ LIA
Sbjct: 244 GIP-AFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPLIA 302
Query: 418 SSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASF---NYLATLFTSDTQVLGIVRSG 474
+F + +K++ + + GV V + A F +++ LFT+D ++ +
Sbjct: 303 YNF-MANKGRMKDVIKAVIMS---IGVIFVVCMIAVFTIGHHMVGLFTTDQAIVEMATFI 358
Query: 475 LLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWG 534
L AS + + ++F G+ A + GAI L +FGL+ V W
Sbjct: 359 LKVTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWS 418
Query: 535 LTLFMSL 541
L + SL
Sbjct: 419 LLIAESL 425
>sp|Q99WP2|MEPA_STAAM Multidrug export protein MepA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=mepA PE=3 SV=1
Length = 451
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 304 PMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLL 363
P+L++ F L V GAA+ T S L I Y K + + N+K + S + +
Sbjct: 184 PILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEIFKI 243
Query: 364 GRTLAAVMTITLSTS------IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 417
G A +M+I + + A G A+A++ I ++ ++ LIA
Sbjct: 244 GIP-AFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPLIA 302
Query: 418 SSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASF---NYLATLFTSDTQVLGIVRSG 474
+F + +K++ + + GV V + A F +++ LFT+D ++ +
Sbjct: 303 YNF-MANKGRMKDVIKAVIMS---IGVIFVVCMIAVFTIGHHMVGLFTTDQAIVEMATFI 358
Query: 475 LLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWG 534
L AS + + ++F G+ A + GAI L +FGL+ V W
Sbjct: 359 LKVTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWS 418
Query: 535 LTLFMSL 541
L + SL
Sbjct: 419 LLIAESL 425
>sp|Q5I0E9|S47A1_RAT Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus
GN=Slc47a1 PE=1 SV=1
Length = 566
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 87/211 (41%), Gaps = 44/211 (20%)
Query: 305 MLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTI---------------------LS 343
+ ++ LGV G+A++ SQ+ + + + Y+ R + L+
Sbjct: 203 LFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLA 262
Query: 344 IPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSM 403
IP+M L + Y +G L+ ++ G + + A I ++ + V M
Sbjct: 263 IPSMLML----CIEWWAYEVGSFLSGIL------------GMVELGAQSITYELAIIVYM 306
Query: 404 LADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTS 463
+ + + + ++ G+ + K+ + +L VT V+L + + +FT+
Sbjct: 307 IPAGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTT 366
Query: 464 DTQVLGIVRSGLLFVSASQPVTAVAYIFDGL 494
D ++ + V+ P+ AV+++F+ L
Sbjct: 367 DWDIVAL-------VAQVVPIYAVSHLFEAL 390
>sp|Q9KRU4|NORM_VIBCH Multidrug resistance protein NorM OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=norM PE=3
SV=2
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 164/407 (40%), Gaps = 49/407 (12%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
+LI L+ P + + ++T G + +++A+ ++ SI+ + S +F + LL
Sbjct: 10 NLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIW-LPSILFGVGLLMAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
VA+ NG K+ V L+LAL + + +A+
Sbjct: 69 VPVVAQ--------------------LNGAGR--QHKIPFEVHQGLILALLVSV-PIIAV 105
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
F + + M + A + + + A+ PA +L A++ G T+ P +
Sbjct: 106 LFQTQFIIRFMDVEEAMATKTVGYMHAVIFAV--PAYLLFQALRSFTDGMSLTK-PAMVI 162
Query: 293 GLGNFSAVFMFPMLMYYF--------KLGVTGAAISTVGSQYMVTLLMIWYL-NKRTILS 343
G F + + L + F +LG G ++T +++ LL+++Y+ + +
Sbjct: 163 G---FIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAH 219
Query: 344 IPNMKNLHF---GDYLRSGGYLLGRTLAAVM--TITLSTSIA---ARQGALAMAAHQICL 395
+ + H + +R + LG +AA + +TL +A A G+ +AAHQ+ L
Sbjct: 220 VKVFETFHKPQPKELIRL--FRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVAL 277
Query: 396 QVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFN 455
V M + A+ + + D + L TGL T A++
Sbjct: 278 NFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFRE 337
Query: 456 YLATLFTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSDFS 502
+A L+T + V+ + LLF + Q + AV + G G D +
Sbjct: 338 QIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMT 384
>sp|B1JJ53|MDTK_YERPY Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=mdtK PE=3 SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|Q66A27|MDTK_YERPS Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=mdtK PE=3 SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|A4TIP9|MDTK_YERPP Multidrug resistance protein MdtK OS=Yersinia pestis (strain
Pestoides F) GN=mdtK PE=3 SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|Q1CIK5|MDTK_YERPN Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=mdtK PE=3 SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|A9QZC0|MDTK_YERPG Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=mdtK PE=3 SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|Q8ZDZ8|MDTK_YERPE Multidrug resistance protein MdtK OS=Yersinia pestis GN=mdtK PE=3
SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|B2K5I9|MDTK_YERPB Multidrug resistance protein MdtK OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=mdtK PE=3 SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|Q1C769|MDTK_YERPA Multidrug resistance protein MdtK OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=mdtK PE=3 SV=1
Length = 457
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 150/400 (37%), Gaps = 38/400 (9%)
Query: 113 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 172
L+ L++P + Q + +++T G + ++A+ V TSI+ + + +F LL
Sbjct: 10 SLLALAIPVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIW-LPAILFGHGLLLAL 68
Query: 173 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 232
T VA+ NG + ++ V LAL + +L L +
Sbjct: 69 TPTVAQ--------------------LNGSGRRS--QIAHQVRQGFWLALCVSVLIMLVL 106
Query: 233 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 292
Y + + I + + A FL G P + ++ G T+ P +
Sbjct: 107 YNSDHVIKQMDNIDPVLAQK--AVGFLHAIMWGVPGYLFFQVLRNQCEGLSKTK-PGMVI 163
Query: 293 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYLNK-RTILSIPN 346
G + Y K LG G ++T +++ L+M WY+ + R+ I
Sbjct: 164 GFVGLLVNIPINYIFIYGKFGAPALGGVGCGVATASVYWVMFLMMRWYVTRARSQQDIKL 223
Query: 347 MKNLHFGDYL---RSGGYLLGRTLAAVMTITLSTSIA---ARQGALAMAAHQICLQVWLS 400
K D+ R G L LA +TL +A + G +A+A HQI L
Sbjct: 224 EKGFAAPDWQVMKRLSGLGLPVALALFFEVTLFAVVALLVSPLGIVAVAGHQIALNFSSL 283
Query: 401 VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATL 460
+ ML + + + + +G + + ++ GL AV ++A L
Sbjct: 284 MFMLPMSLSVAATIRVGFRLGQGAVEQAQVAAYTSMAVGLLLASVTAVFTIVFREHIALL 343
Query: 461 FTSDTQVLGIVRSGLLFVSASQPVTAVAYIFDGLHYGVSD 500
+ +V+ + +L + Q AV I G+ G D
Sbjct: 344 YNKTPEVVTMASHLMLLAALYQLSDAVQVIGSGVLRGYKD 383
>sp|O82855|NORM_VIBPA Multidrug resistance protein NorM OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=norM PE=1 SV=2
Length = 456
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 311 KLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGG------YLLG 364
+LG G ++T +++ L++ Y+ + L N+ FG+Y + + LG
Sbjct: 186 ELGGVGCGVATTIVYWVMFALLLAYVMTSSRLKSINV----FGEYHKPQWKAQVRLFKLG 241
Query: 365 RTLAAVM--TITLSTSIA---ARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASS 419
+AA + +TL +A + G + +AAHQ+ + V ML + A+ +
Sbjct: 242 FPVAAALFFEVTLFAVVALLVSPLGPIIVAAHQVAINFSSLVFMLPMSVGAAVSIRVGHR 301
Query: 420 FAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLLFVS 479
+ + + + + + GL A+I S +A L+T++ +V+ + LLF +
Sbjct: 302 LGEENVDGARVASRVGIMVGLALATITAIITVLSRELIAELYTNNPEVISLAMQLLLFAA 361
Query: 480 ASQPVTAVAYIFDGLHYGVSD 500
Q AV I G G D
Sbjct: 362 VYQCTDAVQVIAAGALRGYKD 382
>sp|Q8RG85|PYRDB_FUSNN Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC
25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=pyrD PE=3
SV=1
Length = 304
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 129 PMAQLMETAYIGRLGPLELASAGVSTSIFNILSKV--FNIPLL-SVATS------FVAED 179
P ++ ET+ G L + L + GV I N L K+ +++P++ +VA S +VA
Sbjct: 57 PTPRVAETSS-GMLNAIGLQNPGVDEIISNQLKKLEKYDVPIIANVAGSDIEDYVYVANK 115
Query: 180 ISRSSSKDSTS-DSSCPNVSYNGCDESTD 207
IS+S + + + SCPNV + G TD
Sbjct: 116 ISKSPNVKALELNISCPNVKHGGIQFGTD 144
>sp|Q8NYB0|MEPA_STAAW Multidrug export protein MepA OS=Staphylococcus aureus (strain MW2)
GN=mepA PE=3 SV=1
Length = 451
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 14/247 (5%)
Query: 304 PMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLL 363
P+L++ F L V GAA+ T S L I Y K + + N+K + S + +
Sbjct: 184 PILIFGFDLNVVGAALGTAISNVAAALFFIVYFMKNSDVVSVNIKLAKPNKEMLSEIFKI 243
Query: 364 GRTLAAVMTITLSTS------IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 417
G A +M+I + + A G A+A++ I ++ ++ LIA
Sbjct: 244 GIP-AFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPLIA 302
Query: 418 SSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASF---NYLATLFTSDTQVLGIVRSG 474
+F + +K++ + + GV V + A F +++ LFT+D ++ +
Sbjct: 303 YNF-MANKGRMKDVIKAVIMS---IGVIFVVCMIAVFTIGHHMVGLFTTDQDIVEMATFI 358
Query: 475 LLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWG 534
L S + + ++F G+ A + GAI L +FGL+ V W
Sbjct: 359 LKVTMTSLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWS 418
Query: 535 LTLFMSL 541
L + SL
Sbjct: 419 LLIAESL 425
>sp|Q6GCD7|MEPA_STAAS Multidrug export protein MepA OS=Staphylococcus aureus (strain
MSSA476) GN=mepA PE=3 SV=1
Length = 451
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 14/247 (5%)
Query: 304 PMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLL 363
P+L++ F L V GAA+ T S L I Y K + + N+K + S + +
Sbjct: 184 PILIFGFDLNVVGAALGTAISNVAAALFFIVYFMKNSDVVSVNIKLAKPNKEMLSEIFKI 243
Query: 364 GRTLAAVMTITLSTS------IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 417
G A +M+I + + A G A+A++ I ++ ++ LIA
Sbjct: 244 GIP-AFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPLIA 302
Query: 418 SSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASF---NYLATLFTSDTQVLGIVRSG 474
+F + +K++ + + GV V + A F +++ LFT+D ++ +
Sbjct: 303 YNF-MANKGRMKDVIKAVIMS---IGVIFVVCMIAVFTIGHHMVGLFTTDQDIVEMATFI 358
Query: 475 LLFVSASQPVTAVAYIFDGLHYGVSDFSYAAYSMMAVGAISSVFLLYAPRVFGLSAVWWG 534
L S + + ++F G+ A + GAI L +FGL+ V W
Sbjct: 359 LKVTMTSLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWS 418
Query: 535 LTLFMSL 541
L + SL
Sbjct: 419 LLIAESL 425
>sp|Q58467|Y1068_METJA Uncharacterized membrane protein MJ1068 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1068 PE=3 SV=1
Length = 507
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 311 KLGVTGAAISTVGSQYMVTLLMIWYLNK 338
K G+ GAAI+TV +++ + IW+LNK
Sbjct: 405 KFGIIGAAITTVFGYFIMWIFQIWFLNK 432
>sp|Q7VMB5|NORM_HAEDU Probable multidrug resistance protein NorM OS=Haemophilus ducreyi
(strain 35000HP / ATCC 700724) GN=norM PE=3 SV=1
Length = 463
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 128/326 (39%), Gaps = 30/326 (9%)
Query: 191 DSSCPNVSY-NGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSAS 249
++ P VSY NG ++ LV A I ++ ++ S LD M +
Sbjct: 70 NAITPTVSYLNGANQRNLIAHQIRQGFWLVWAFVIPLI---VVFLNSHWILDYMNTPAVF 126
Query: 250 SMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYY 309
+ + +Q +L++ AIG +L++ ++ + G + + + +G + L Y
Sbjct: 127 AQK--SQDYLAIMAIGIVPALLTVNLRCMNDGLANPKPAMRITFIGLLCNI----PLNYI 180
Query: 310 F--------KLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGY 361
F ++G G ++T + + L+M Y + N F + SG
Sbjct: 181 FIFGKFGVPEMGAVGCGVATAIVNWSMFLMMFHYCYTNKPQKDIGLFNKWFE--MPSGKT 238
Query: 362 LLG----------RTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAAS 411
LL T VM + S + G+ +A+HQ LQ + M+ + +
Sbjct: 239 LLKICKLGLPIGFATFTEVMLFSTSALFLSPLGSQVVASHQTALQTSSMLFMVPLSFGIA 298
Query: 412 GQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIV 471
++ + K I++ AL TG+ V A+++ N + FT D + I
Sbjct: 299 TTIVLGRVLGQKLVEEAKIISYHALITGVIFAVIAAILIVLFNNIIPLAFTRDPVSIAIA 358
Query: 472 RSGLLFVSASQPVTAVAYIFDGLHYG 497
LLF + Q ++ + +G+ G
Sbjct: 359 SHLLLFAAVYQIPDSLQVVANGILRG 384
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,969,799
Number of Sequences: 539616
Number of extensions: 6964986
Number of successful extensions: 24588
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 24398
Number of HSP's gapped (non-prelim): 226
length of query: 571
length of database: 191,569,459
effective HSP length: 123
effective length of query: 448
effective length of database: 125,196,691
effective search space: 56088117568
effective search space used: 56088117568
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)