Query 008291
Match_columns 571
No_of_seqs 332 out of 2783
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 22:43:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2exr_A Cytokinin dehydrogenase 100.0 1.7E-69 5.9E-74 594.8 45.0 503 59-567 3-523 (524)
2 1w1o_A Cytokinin dehydrogenase 100.0 1.4E-63 4.8E-68 550.3 38.8 479 79-565 33-534 (534)
3 3pm9_A Putative oxidoreductase 100.0 1.2E-54 4.2E-59 470.7 15.2 427 82-562 19-475 (476)
4 4bby_A Alkyldihydroxyacetoneph 100.0 3.7E-50 1.3E-54 452.5 23.1 217 103-325 196-425 (658)
5 2uuu_A Alkyldihydroxyacetoneph 100.0 6.2E-47 2.1E-51 419.2 22.9 432 91-562 105-583 (584)
6 3rja_A Carbohydrate oxidase; p 100.0 2.6E-43 8.9E-48 382.1 33.2 434 92-565 13-471 (473)
7 3tsh_A Pollen allergen PHL P 4 100.0 1.8E-43 6.1E-48 387.1 32.0 200 104-311 44-249 (500)
8 3vte_A Tetrahydrocannabinolic 100.0 4.5E-43 1.5E-47 382.2 34.5 439 88-566 20-513 (518)
9 2bvf_A 6-hydroxy-D-nicotine ox 100.0 2.3E-42 7.9E-47 374.5 39.9 428 87-565 10-456 (459)
10 1e8g_A Vanillyl-alcohol oxidas 100.0 1E-42 3.4E-47 385.4 35.5 426 90-565 34-548 (560)
11 1wvf_A 4-cresol dehydrogenase 100.0 1.7E-43 5.8E-48 388.9 29.1 448 83-568 23-517 (520)
12 3fw9_A Reticuline oxidase; BI- 100.0 1.1E-42 3.9E-47 378.0 32.5 420 103-565 36-493 (495)
13 1f0x_A DLDH, D-lactate dehydro 100.0 6.1E-45 2.1E-49 400.7 9.0 236 82-326 14-315 (571)
14 3pop_A GILR oxidase; FAD bindi 100.0 3.7E-41 1.3E-45 367.0 34.0 436 88-564 7-500 (501)
15 1zr6_A Glucooligosaccharide ox 100.0 4.8E-41 1.6E-45 367.4 31.0 199 92-299 19-223 (503)
16 2y3s_A TAML; oxidoreductase; H 100.0 6.6E-40 2.3E-44 359.9 37.1 435 89-566 32-528 (530)
17 2ipi_A Aclacinomycin oxidoredu 100.0 1E-39 3.4E-44 358.2 34.5 433 90-566 29-520 (521)
18 2wdx_A Putative hexose oxidase 100.0 3.5E-39 1.2E-43 353.8 34.6 203 89-299 30-258 (523)
19 4feh_A Oxidoreductase DPRE1; a 100.0 3.2E-37 1.1E-41 334.4 32.1 206 97-309 28-237 (481)
20 2vfr_A Xylitol oxidase, aldito 100.0 6.2E-38 2.1E-42 336.3 21.9 394 102-560 10-414 (422)
21 3js8_A Cholesterol oxidase; ch 100.0 6.9E-33 2.3E-37 300.7 34.9 198 98-306 15-235 (540)
22 2i0k_A Oxidoreductase; MIX alp 100.0 8.6E-33 3E-37 305.6 29.7 199 97-306 20-239 (561)
23 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.1E-28 3.8E-33 254.9 0.9 181 83-289 21-212 (326)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.8E-26 6.2E-31 237.1 12.5 189 81-289 25-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.5E-24 5E-29 225.1 12.7 179 93-289 13-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 2.9E-22 9.9E-27 207.3 16.1 165 109-289 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 1.3E-21 4.4E-26 195.6 9.0 152 109-288 19-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 3.8E-20 1.3E-24 179.9 10.4 120 175-300 2-127 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 1.6E-06 5.4E-11 87.5 10.2 153 113-287 5-177 (287)
30 2w3s_A Xanthine dehydrogenase; 97.5 0.00012 4E-09 78.5 6.3 149 114-286 178-345 (462)
31 1n62_C Carbon monoxide dehydro 97.4 0.00017 5.9E-09 72.5 6.7 150 113-287 5-177 (288)
32 3nvz_B Xanthine dehydrogenase/ 96.8 0.0011 3.8E-08 67.2 5.3 157 110-286 7-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.3 0.0029 9.8E-08 63.5 5.0 150 112-285 4-174 (288)
34 3hrd_C Nicotinate dehydrogenas 95.8 0.0094 3.2E-07 60.0 5.8 150 113-285 3-177 (296)
35 3unc_A Xanthine dehydrogenase/ 90.2 0.15 5.3E-06 61.1 3.8 154 111-285 231-412 (1332)
36 1rm6_B 4-hydroxybenzoyl-COA re 87.0 0.1 3.5E-06 53.0 -0.5 99 113-222 6-117 (324)
37 3zyv_A AOH1; oxidoreductase, m 72.5 8.5 0.00029 46.4 9.1 147 114-284 241-418 (1335)
38 2dnh_A Bruno-like 5, RNA bindi 28.6 1E+02 0.0034 24.3 5.8 40 272-311 37-76 (105)
39 2do4_A Squamous cell carcinoma 26.6 1.1E+02 0.0038 23.8 5.7 40 272-311 39-78 (100)
40 3ulh_A THO complex subunit 4; 26.0 1.1E+02 0.0037 24.2 5.5 39 273-311 52-90 (107)
41 3s8s_A Histone-lysine N-methyl 25.0 1.2E+02 0.0042 24.5 5.7 40 272-311 28-68 (110)
42 2ywk_A Putative RNA-binding pr 24.0 1E+02 0.0034 23.8 4.9 40 272-311 38-77 (95)
43 2do0_A HnRNP M, heterogeneous 23.7 1.3E+02 0.0045 24.0 5.7 40 272-311 37-76 (114)
44 2pe8_A Splicing factor 45; RRM 22.6 1.2E+02 0.0042 24.4 5.2 46 266-311 29-76 (105)
45 1jmt_A Splicing factor U2AF 35 22.3 1.3E+02 0.0045 24.1 5.4 40 272-311 49-88 (104)
46 1xty_A PTH, peptidyl-tRNA hydr 21.3 1.1E+02 0.0037 25.7 4.7 46 99-150 43-89 (120)
47 2d9p_A Polyadenylate-binding p 21.3 1.7E+02 0.0059 22.8 5.9 39 272-311 37-75 (103)
48 3p04_A Uncharacterized BCR; SE 20.2 1.1E+02 0.0036 24.4 4.1 22 113-134 6-27 (87)
49 3ue2_A Poly(U)-binding-splicin 20.1 1.6E+02 0.0054 24.4 5.5 50 262-311 37-91 (118)
No 1
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=1.7e-69 Score=594.82 Aligned_cols=503 Identities=46% Similarity=0.835 Sum_probs=407.0
Q ss_pred HHHHHHHHhhcccccCcc--cCCCcc-ccccccCCCeeecc--hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHH
Q 008291 59 RSFMVLFLCCITVKINLC--FSGIPY-SLKTLTLDGHLNFD--EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIW 133 (571)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~--~~~~~~-~l~~~~~~g~v~~~--~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~ 133 (571)
.++...++.++....+.. -+.... -++.+.+.++|++| ++..|++||+..+...|.+|++|+|++||+++|++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~d~~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~ 82 (524)
T 2exr_A 3 AYIEPYFLENDAEAASAATAAGKSTDGVSESLNIQGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAAL 82 (524)
T ss_dssp -------------------------------CCCSSEEECSHHHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHHHH
T ss_pred ccccchhhcCchhhhhccccccccHHHHHHhcCCCCeEEeCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHH
Confidence 345555666666543321 011111 12223368999999 7788999998888999999999999999999999999
Q ss_pred -HhCCCCCcEEEEEcCCCCCCCCCcCCCcEEEEcCCCCCCeEEE---e--CCcceEEEEcCCCcHHHHHHHHH-hCCCcc
Q 008291 134 -EMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQV---Y--AENSFYVDVSGGELWINILHESV-KYGLAP 206 (571)
Q Consensus 134 -~~~~~~~~~v~~rg~G~s~~g~~~~~~givIdl~~l~~i~i~i---~--~~~~~~v~v~aG~~~~~l~~~l~-~~Gl~~ 206 (571)
+ +++||++||+|||+.|++.+.+||+|||++||+|+++. + .+. .+|+||||++|.++++++. ++|++|
T Consensus 83 ~~----~~~~v~~~GgGts~~g~~~~~~gvvidl~~m~~i~i~~~~~~~~~~~-~~v~v~aGv~~~~l~~~~l~~~Gl~~ 157 (524)
T 2exr_A 83 RS----DKLTVAARGNGHSINGQAMAEGGLVVDMSTTAENHFEVGYLSGGDAT-AFVDVSGGALWEDVLKRCVSEYGLAP 157 (524)
T ss_dssp HS----SSCCEEEESSSCCSSSTTCCTTSEEEEGGGGTTSCEEEEECCSSSSS-EEEEEETTCBHHHHHHHHHHHHSEEC
T ss_pred hh----cCceEEEECCCcCCCCcccCCCEEEEECcCCCCcEEeecccCCCCCc-eEEEEeCCcCHHHHHHHHHHHcCCCC
Confidence 7 89999999999999999887789999999999975555 2 122 5999999999999877666 999998
Q ss_pred CCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeee
Q 008291 207 KSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEP 286 (571)
Q Consensus 207 ~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p 286 (571)
+++++...+||||+++++|+|+++.+||.++|+|++++||++||++++++..+|+||+|+++||+|+|||||+++||++|
T Consensus 158 ~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p 237 (524)
T 2exr_A 158 RSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQP 237 (524)
T ss_dssp SCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEE
T ss_pred CCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEE
Confidence 88888888999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred cCCceEEEEEEeCCHHHHHHHHHHHHhcC--CccccccceEEeccccccccccccCCC-CCccccccCCC-CCCeEEEEE
Q 008291 287 APDMVKWIRVLYSDFATFARDQEYLISAE--KTFDYIEGFVMVNRTGLLNNWRSSFDP-QDPVQASQFKS-DGQTLFCLE 362 (571)
Q Consensus 287 ~p~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~e~vd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~le 362 (571)
.|+.+.++.+.|.+++++.+++..+++.. ..+|++|+..+...+.+.+.|+..+.. ........+|. ++.+++++|
T Consensus 238 ~p~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve 317 (524)
T 2exr_A 238 APDMVRWIRVVYTEFDEFTQDAEWLVSQKNESSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLE 317 (524)
T ss_dssp CCSEEEEEEEEESCHHHHHHHHHHHHTSCTTSSCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEE
T ss_pred cCCeeEEEEEEeCCHHHHHHHHHHHHHcCCcchhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEE
Confidence 99998999999999999999999998753 368999999998776666667654221 11111233542 456889999
Q ss_pred Eeeec-CCCChHHHHHHHHHHHhhcccCCCeeeeccchhhhhhhhhhhhHHHHHhcccccCCccceecccCcccHHHHHH
Q 008291 363 LAKYI-NKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAR 441 (571)
Q Consensus 363 ~~~~~-~~~~~~~~~~~l~~ll~~l~~~~~~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r~~~~d~~vP~s~i~~f~~ 441 (571)
+.+|| ++++.++++++++++++.++..++..+..+..|.+|.+.....+-..+...+|.++++|.|++||.++++++++
T Consensus 318 ~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~~~~Dv~VP~s~l~~~~~ 397 (524)
T 2exr_A 318 LGLHYRDSDSNSTIDKRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNR 397 (524)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCCCCEEEEEEHHHHHHHHH
T ss_pred EEeecCCCCCHHHHHHHHHHHHHHHHhCCCeEeecccchhhhhhhhhhHHHHhhhhcccccCCCeeEEEECHHHHHHHHH
Confidence 98888 77688889999999999998887776667777888776553333345667789988899999999999999999
Q ss_pred HHHHhhhcccCCccEEEecCCCCCCCCCCCccCCC-cceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCc
Q 008291 442 EVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPE-EDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGV 520 (571)
Q Consensus 442 ~v~~~il~~~~~g~i~~~p~~~~~~~~~~~~~~p~-~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~ 520 (571)
++.+.+++++|.|++++||....+|..+.+.++|+ +++++.++.+....+.+.+ ...+++.++++++.++|.+.|.++
T Consensus 398 ~v~~~~~gdgn~h~~i~~~~~~~~~~~r~~~~~~~g~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~G~~~ 476 (524)
T 2exr_A 398 TVFKELVKNGVNGPMLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFVPPCAKV-SSVEKMVAQNQEIVHWCVKNGIDY 476 (524)
T ss_dssp HCCCCCTTTCCSSCEEEEEEEGGGSCTTSSCCCCSSCSEEEEEEECCCCCTTSCH-HHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHhCCCCcceEEEEeCCchHHHhHHHhhCCCCccEEEEEEEeccCCCcccc-hHHHHHHHHHHHHHHHHHHcCCcc
Confidence 98666678888899999999988898888889986 7788888877654332111 367788899999999999999999
Q ss_pred eeccCCCCCHHHHHHhhchhHHHHHHhhhcCCCCCCCCCCCcccCCC
Q 008291 521 KQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKA 567 (571)
Q Consensus 521 ~~Yl~~~~~~~~w~~~yG~~~~~l~~lK~~yDP~~ifnPG~~If~~~ 567 (571)
+.|++|+.++++|++|||+.|+.|+++|++|||++||||||.||++.
T Consensus 477 ~~yl~~~~~~~~w~~~~G~~~~~m~~iK~~~DP~~iLnPG~~if~~~ 523 (524)
T 2exr_A 477 KLYLPHYKSQEEWIRHFGNRWSRFVDRKAMFDPMAILSPGQKIFNRS 523 (524)
T ss_dssp EESSCCCCSHHHHHHHHGGGHHHHHHHHHHHCTTCCBCGGGCSSCCC
T ss_pred EEeecCCCCHHHHHHHhhhHHHHHHHHHhhcCchhhcCCCCccCCCC
Confidence 99999999999999999999999999999999999999999999875
No 2
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.4e-63 Score=550.30 Aligned_cols=479 Identities=47% Similarity=0.848 Sum_probs=383.3
Q ss_pred CCccccccccCCCeeecc--hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCCCCC
Q 008291 79 GIPYSLKTLTLDGHLNFD--EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHS-ELTVAARGHGHSLQGQ 155 (571)
Q Consensus 79 ~~~~~l~~~~~~g~v~~~--~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~-~~~v~~rg~G~s~~g~ 155 (571)
+...+|+++.+.++++++ .+..|++||+..+...|.+|++|+|++||+++|++|++ ..+ ++||++||+|||+.|+
T Consensus 33 ~~~~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~--~~~~~~~v~~~G~G~~~~g~ 110 (534)
T 1w1o_A 33 PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANS--TPGWPYTIAFRGRGHSLMGQ 110 (534)
T ss_dssp -------CTTTTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHH--CTTCCCCEEEESSCCCSSST
T ss_pred HHHHHHHhcCCCceEecCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHHh--cCCCCceEEEECCCCCCCCC
Confidence 455678877789999998 67789999998889999999999999999999999996 114 8999999999999999
Q ss_pred CcCCCcEEEEcCCCCCC----eEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCCcc
Q 008291 156 AQAHQGVVINMESLQGP----KMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAF 231 (571)
Q Consensus 156 ~~~~~givIdl~~l~~i----~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~ 231 (571)
+.+.+|++|||++||+| ++++++++ .+|+||||++|.+|++++.++|++|+++++...+||||+++++|+|+.+.
T Consensus 111 ~~~~~gvvi~l~~m~~i~~~~~~~~d~~~-~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~ 189 (534)
T 1w1o_A 111 AFAPGGVVVNMASLGDAAAPPRINVSADG-RYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAF 189 (534)
T ss_dssp TCCTTSEEEEGGGGGCSSSSCSEEECTTS-SEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHH
T ss_pred cCCCCeEEEECccccccccCccEEEcCCC-CEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCcccccc
Confidence 88778999999999997 37888777 89999999999999999999999999988888899999999999899999
Q ss_pred cccCccccEEEEEEEecCCeEEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 232 QHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 232 ~~G~~~d~v~~levV~~~G~i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
+||.++|+|+++|||++||+++++++.+|+||||+++||+|+|||||+++||++|.|+.+.++.+.|.+++++.++++.+
T Consensus 190 ~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (534)
T 1w1o_A 190 RHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERL 269 (534)
T ss_dssp HHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred ccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999998888887
Q ss_pred HhcC--------CccccccceEEecccccccccccc-CCC-CCccccccCCCC--CCeEEEEEEeeecCCCCh--HHHHH
Q 008291 312 ISAE--------KTFDYIEGFVMVNRTGLLNNWRSS-FDP-QDPVQASQFKSD--GQTLFCLELAKYINKDEK--DLVNQ 377 (571)
Q Consensus 312 ~~~~--------~~~e~vd~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~--~~~~~~le~~~~~~~~~~--~~~~~ 377 (571)
.+.+ ..+|++|...+... ...+.|... +.+ ........++.. +++++++|+..+|++.+. +++++
T Consensus 270 ~~~~~~~~~~~~~~~e~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~~~~~~~~~ 348 (534)
T 1w1o_A 270 TAPRPGGGGASFGPMSYVEGSVFVNQ-SLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQ 348 (534)
T ss_dssp HCBC------CBCSCSEEEEEEEEGG-GHHHHHHTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC-------CHHHH
T ss_pred HhcccccccccccchhHhhhhhhccc-ccccccccccccCccccccccccccccccceEEEEEEEEecCCCccchhhhHH
Confidence 7642 35899999877543 111222211 000 000000122222 568899999888866555 67788
Q ss_pred HHHHHHhhcccCCCeeeeccchhhhhhhhhhhhHHHHHhcccccCCccceecccCcccHHHHHHHHHHhhhcccCC-ccE
Q 008291 378 EVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSN-GPI 456 (571)
Q Consensus 378 ~l~~ll~~l~~~~~~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r~~~~d~~vP~s~i~~f~~~v~~~il~~~~~-g~i 456 (571)
.++++++.++..++..+..+.+|.++.++.....-..+..+.|..+++|.|++||.+++++|++++.+.+..+... +++
T Consensus 349 ~~~~~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~w~~r~~~~~~~~~~~~d~~vP~s~l~~~~~~~~~~l~~~~~~~~~~ 428 (534)
T 1w1o_A 349 ELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPL 428 (534)
T ss_dssp HHHHHHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEEEEEEGGGHHHHHHHHTTTTTTTSCCCSCE
T ss_pred HHHHHHHhhcccCCcceeccchHHHHhhhhhhhHHHHhhccccccCCccccEEecHHHHHhHHHHHHHHHhhccCCcccE
Confidence 8999999987766655556777888766543222344567889888888899999999999999886556654433 778
Q ss_pred EEecCCCCCCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCceeccCCCCCHHHHHHh
Q 008291 457 LIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSH 536 (571)
Q Consensus 457 ~~~p~~~~~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~~~Yl~~~~~~~~w~~~ 536 (571)
+++++.+.+|..+.+.+.|+++.++++.....+. .++..+...++++++.+.+.+.|.+++.|++++.++.+|+++
T Consensus 429 ~~~~~~gh~~~~~~s~v~~dgn~h~~v~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~yl~~~~~~~~w~~~ 504 (534)
T 1w1o_A 429 IVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSV----APNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRH 504 (534)
T ss_dssp EEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC-------CHHHHHHHHHHHHHHHHHHTTCCCEESSCCCSSHHHHHHH
T ss_pred EEeecccccccccccccCCCccEEEEEEEecCCC----CcchHHHHHHHHHHHHHHHHHhCCCcEEECCCCCChHHHHHH
Confidence 8888877777777778888989988887654321 112345567888999999888887778999998889999999
Q ss_pred hch-hHHHHHHhhhcCCCCCCCCCCCcccC
Q 008291 537 FGP-QWEVFVQRKSTYDPLAILAPGQRIFQ 565 (571)
Q Consensus 537 yG~-~~~~l~~lK~~yDP~~ifnPG~~If~ 565 (571)
||+ +|++|+++|++|||+|||||||.||+
T Consensus 505 ~G~~~~~~l~~iK~~~DP~~ilnpgk~I~~ 534 (534)
T 1w1o_A 505 FGAAKWNRFVEMKNKYDPKRLLSPGQDIFN 534 (534)
T ss_dssp HCHHHHHHHHHHHHHHCTTCCBCGGGCSCC
T ss_pred hCHHHHHHHHHHHHhcCchhhcCCCCcCCC
Confidence 998 99999999999999999999998985
No 3
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.2e-54 Score=470.70 Aligned_cols=427 Identities=17% Similarity=0.190 Sum_probs=306.1
Q ss_pred cccccccCCCeeecc--hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-
Q 008291 82 YSLKTLTLDGHLNFD--EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA- 158 (571)
Q Consensus 82 ~~l~~~~~~g~v~~~--~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~- 158 (571)
.+|+++...+.+.++ .+..|++||+..+...|.+|++|+|++||+++|++|++ +++||++||+|||+.|++.+
T Consensus 19 ~~L~~~lg~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~----~~~pv~~~GgGt~~~g~~~~~ 94 (476)
T 3pm9_A 19 ARFTAIVGDKHALTDPLELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLANE----ARVALVPQGGNTGLVGGQTPH 94 (476)
T ss_dssp HHHHHHHCGGGEECSHHHHHHHHBCTTCCCBCCCSCEECCCSHHHHHHHHHHHHH----HTCCEEEESSSCCSSSTTCCC
T ss_pred HHHHHhcCCCcEecCHHHHHHHhcccccccCCCCCEEEecCCHHHHHHHHHHHHH----cCCeEEEEeCCCCCCCCccCC
Confidence 355555455678888 67889999987789999999999999999999999999 99999999999999988876
Q ss_pred CCcEEEEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCc-cCCCCCCCceeecccccCCccCCCcccccCcc
Q 008291 159 HQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLA-PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQI 237 (571)
Q Consensus 159 ~~givIdl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~-~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~ 237 (571)
.+||+|||++||+| +++|.++ .+|+||||++|.+|++++.++|++ |.++++...+||||+++++++|..+.+||.++
T Consensus 95 ~ggvvIdl~~m~~i-~~id~~~-~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~ 172 (476)
T 3pm9_A 95 NGEVVISLKRMDKI-REIDTSS-NTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLAR 172 (476)
T ss_dssp SSCEEEECTTCCCE-EEEETTT-TEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHH
T ss_pred CCcEEEEeeCCCce-EEEcCCC-CeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHH
Confidence 47999999999997 7899888 899999999999999999999996 77777777899999999888788889999999
Q ss_pred ccEEEEEEEecCCeEEEcCCC-----CCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHHH
Q 008291 238 SNVHQLEVVTGKGEIINCSEK-----QNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLI 312 (571)
Q Consensus 238 d~v~~levV~~~G~i~~~~~~-----~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l~ 312 (571)
|+|+++++|++||++++++.. .++||+|+++||+|+|||||+++||++|.|+.+....+.|++++++.+++..+.
T Consensus 173 d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 252 (476)
T 3pm9_A 173 DMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQ 252 (476)
T ss_dssp HHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred HheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHH
Confidence 999999999999999998642 468999999999999999999999999999988888999999999999998887
Q ss_pred h----cCCccccccceEEeccccccccccccCCCCCccccccCCCCCCeEEEEEEeeecCCCChHHHHHHHHHHHhhccc
Q 008291 313 S----AEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNY 388 (571)
Q Consensus 313 ~----~~~~~e~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~l~~ll~~l~~ 388 (571)
+ .+.++|+||...+..... + .. ...+++.+.++++++|+ ++.+ ++++++++++++.+..
T Consensus 253 ~~~g~~p~a~El~d~~~~~~~~~--------~-~~---~~~~~~~~~~~~llve~----~g~~-~~~~~~~~~~~~~~~~ 315 (476)
T 3pm9_A 253 GEAAGNLTSFELIAETPLDFSVR--------H-AN---NRDPLEARYPWYVLIEL----SSPR-DDARAALESILERGFE 315 (476)
T ss_dssp HHHGGGEEEEEEEEHHHHHHHHH--------H-TT---CCCCSSSCCSEEEEEEE----EESS-SCHHHHHHHHHHHHHH
T ss_pred HhcCCCceEEEecCHHHHHHHHh--------c-cC---CCCCCCccCCeEEEEEE----ccCc-HHHHHHHHHHHHHHHh
Confidence 5 255688888754421100 0 00 00123333468899995 4444 4566677777776543
Q ss_pred CCCeeeeccchhhhhhhhhhhhHHHHHhcccccCCc------------cceecccCcccHHHHHHHHHHhhhccc-CCcc
Q 008291 389 IPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPH------------PWLNLFIPQSKIHDFAREVFGNILAET-SNGP 455 (571)
Q Consensus 389 ~~~~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r~------------~~~d~~vP~s~i~~f~~~v~~~il~~~-~~g~ 455 (571)
.+... +. ..+.+..+...+|+.|+ .+.|++||.+++++|++++ ++++... ..-.
T Consensus 316 ~g~~~---~~---------~~a~~~~~~~~lW~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~~~~~-~~~~~~~~~~~~ 382 (476)
T 3pm9_A 316 DGIVV---DA---------AIANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQA-NAAVVALIPGAR 382 (476)
T ss_dssp TTCCC---EE---------EECCSHHHHHHHHHHHHTHHHHTGGGCCEECCEEECCGGGHHHHHHHH-HHHHHHHSTTCE
T ss_pred cCCCc---ce---------EEeCCHHHHHHHHHHHHHHHHHHhhcCCceeEEEEeeHHHHHHHHHHH-HHHHHHhcCCCe
Confidence 32210 00 01122223344555443 2469999999999999987 4444321 1222
Q ss_pred EEEecCCCCCCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCceeccCC--CCCHHHH
Q 008291 456 ILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPH--YTTQEQW 533 (571)
Q Consensus 456 i~~~p~~~~~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~~~Yl~~--~~~~~~w 533 (571)
+.++...+ +..+++.+.. . ...+..+..+.+.+..+++.+.+.+.|+.. --.| -..+.+|
T Consensus 383 ~~~~gH~g------------dGnlH~~i~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~gGsi--s~EHGiG~~k~~~ 444 (476)
T 3pm9_A 383 PVPFGHLG------------DGNIHYNVSQ--P--VGADKAEFLARWHDVSQVVFEVVLRLGGSI--SAEHGIGVMKRDE 444 (476)
T ss_dssp EEEEEEGG------------GTEEEEEEEC--C--TTCCHHHHHTTHHHHHHHHHHHHHHTTCBS--CSSSCCTTTTHHH
T ss_pred EEEEEEeC------------CCceEEEEec--C--CcCChHHHHHHHHHHHHHHHHHHHHcCCEE--EEcccCchhHHHH
Confidence 33333211 1222222211 0 000000012233344555556555444222 2223 1223344
Q ss_pred -HHhhch-hHHHHHHhhhcCCCCCCCCCCCc
Q 008291 534 -RSHFGP-QWEVFVQRKSTYDPLAILAPGQR 562 (571)
Q Consensus 534 -~~~yG~-~~~~l~~lK~~yDP~~ifnPG~~ 562 (571)
...+|+ .++.|+++|+.|||+||||||+.
T Consensus 445 l~~~~~~~~~~~m~~iK~~~DP~~ilNPGki 475 (476)
T 3pm9_A 445 LAEVKDKTAIELMRSIKALLDPHGIMNPGKV 475 (476)
T ss_dssp HHHHSCHHHHHHHHHHHHHHCTTSCBSTTSC
T ss_pred HHHhcCHHHHHHHHHHHHHhCcccCCCCCCc
Confidence 456775 59999999999999999999964
No 4
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=3.7e-50 Score=452.45 Aligned_cols=217 Identities=18% Similarity=0.245 Sum_probs=196.9
Q ss_pred hhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-----CCcEEEEcCCCCCCeEEEe
Q 008291 103 RDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA-----HQGVVINMESLQGPKMQVY 177 (571)
Q Consensus 103 ~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~-----~~givIdl~~l~~i~i~i~ 177 (571)
..|.+.|+..|.+||+|+|++||+++|++|++ +++||++||||||+.|++.+ .++|+|||++||+| +++|
T Consensus 196 ~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~----~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrI-leiD 270 (658)
T 4bby_A 196 LLREGMFERIPDIVLWPTCHDDVVKIVNLACK----YNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRI-LWVD 270 (658)
T ss_dssp HHHSSCCSCCCSEEEECCSHHHHHHHHHHHHH----TTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCE-EEEE
T ss_pred HHhCCcccCCcCEEEeeCCHHHHHHHHHHHHH----CCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCc-EEEc
Confidence 34667789999999999999999999999999 99999999999999876553 35799999999999 8999
Q ss_pred CCcceEEEEcCCCcHHHHHHHHHhCCCc-cCCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEEcC
Q 008291 178 AENSFYVDVSGGELWINILHESVKYGLA-PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCS 256 (571)
Q Consensus 178 ~~~~~~v~v~aG~~~~~l~~~l~~~Gl~-~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~~~ 256 (571)
+++ .+|+||||+++.+|.++|.++|++ |+++++...+||||+++++++|..+.+||.++|+|+++|||++||++++++
T Consensus 271 ~~~-~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~ 349 (658)
T 4bby_A 271 ENN-LTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSC 349 (658)
T ss_dssp TTT-TEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSC
T ss_pred CCC-CEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccc
Confidence 988 899999999999999999999984 777778888999999999998999999999999999999999999999876
Q ss_pred CC----CCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHHHhc---CCccccccceE
Q 008291 257 EK----QNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISA---EKTFDYIEGFV 325 (571)
Q Consensus 257 ~~----~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~e~vd~~~ 325 (571)
+. .+|||+++++||+|||||||+++|||+|.|+.+..+.+.|++++++.+++..+.+. +..+|++|...
T Consensus 350 ~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~~~~~~psa~El~D~~~ 425 (658)
T 4bby_A 350 QGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRLMDNQQ 425 (658)
T ss_dssp CCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHHTTCCCSEEEEECHHH
T ss_pred cccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHHHcCCCccccccccHHH
Confidence 42 46899999999999999999999999999999999999999999999999988763 55678887643
No 5
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=6.2e-47 Score=419.18 Aligned_cols=432 Identities=14% Similarity=0.148 Sum_probs=278.1
Q ss_pred Ceeecc--hhhhHhhh-----c----cCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-
Q 008291 91 GHLNFD--EVHNAARD-----F----GNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA- 158 (571)
Q Consensus 91 g~v~~~--~~~~~~~d-----~----~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~- 158 (571)
..|.+| +...|++| | .+.+...|.+|++|+|++||+++|++|++ +++||++||||||+.|++.+
T Consensus 105 ~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~----~~~pv~~~GgGts~~gg~~~~ 180 (584)
T 2uuu_A 105 DQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHK----YNVVIIPMGGGSNIVGAIEPV 180 (584)
T ss_dssp GGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHHHH----HTCEEEEESSCCCSSCTTSCC
T ss_pred CeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHHHH----cCCeEEEEeCCCCCCCCCccc
Confidence 668887 33444432 2 22356789999999999999999999999 99999999999999987765
Q ss_pred ---CCcEEEEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCc-cCCCCCCCceeecccccCCccCCCccccc
Q 008291 159 ---HQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLA-PKSWTDYLHLTVGGTLSNAGISGQAFQHG 234 (571)
Q Consensus 159 ---~~givIdl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~-~~~~~~~~~~tvGG~~~~~g~g~~~~~~G 234 (571)
.++|+|||++||+| +++|+++ .+|+||||++|.+|+++|.++|++ |.++++...+||||+++++++|..+.+||
T Consensus 181 ~~~~g~vvidl~~mn~I-~~id~~~-~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG 258 (584)
T 2uuu_A 181 SNERFTVSIDMRRMNKV-LWVDRRE-MTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYG 258 (584)
T ss_dssp CCSSCEEEEECTTCCCE-EEEETTT-TEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHC
T ss_pred CCCCCEEEEECCCCCcc-EEEcCCC-CEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcC
Confidence 36789999999997 7899887 899999999999999999999996 45554456789999999888899999999
Q ss_pred CccccEEEEEEEecCCeEEEc---CCCCCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 235 PQISNVHQLEVVTGKGEIINC---SEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 235 ~~~d~v~~levV~~~G~i~~~---~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
.++|+|+++|||+++|++++. ....++||+|+++||+|+|||||+++||++|.|+......+.|++++++.+++..+
T Consensus 259 ~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 338 (584)
T 2uuu_A 259 DIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQI 338 (584)
T ss_dssp CHHHHEEEEEEEETTEEECCC-------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHH
Confidence 999999999999999998762 33468999999999999999999999999999998888889999999999998888
Q ss_pred Hhc---CCccccccceEEeccccccccccccCCC------CCc-cccccCCCCCCeEEEEEEeeecCCCChHHHHHHHHH
Q 008291 312 ISA---EKTFDYIEGFVMVNRTGLLNNWRSSFDP------QDP-VQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVES 381 (571)
Q Consensus 312 ~~~---~~~~e~vd~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~l~~ 381 (571)
... +..+|++|...+......... ...+.. +.. .....++.+..+++++|+ ++. .++++++++.
T Consensus 339 ~~~~~~p~a~El~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llve~----~g~-~~~v~~~~~~ 412 (584)
T 2uuu_A 339 RSSEVIPTMIRVYDPEETQLSFAWKPS-KGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGF----EGP-KKVVDFHRTS 412 (584)
T ss_dssp HHHTCCCSEEEEECHHHHHHHHHTCCS-CCCTTCCHHHHHHHHHHHTTTSCTTTCEEEEEEE----EEC-HHHHHHHHHH
T ss_pred HhcCCCceEEEEechhHHHHHhhccCc-ccccchhhhhhHHHhhhhccCCCCCccEEEEEEE----ecC-hHHHHHHHHH
Confidence 752 566788876432100000000 000000 000 001134434567788885 443 4567777888
Q ss_pred HHhhcccCCCeeeeccchhhhhhhhhhhhHHHHHhcccccCC--ccceecccCcccHHHHHHHHHHhhhc---ccCCccE
Q 008291 382 SLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVP--HPWLNLFIPQSKIHDFAREVFGNILA---ETSNGPI 456 (571)
Q Consensus 382 ll~~l~~~~~~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r--~~~~d~~vP~s~i~~f~~~v~~~il~---~~~~g~i 456 (571)
+.+.+...++.....+. ..++...+......+ ...|+.. ....|++||.++++++++++. +++. ......+
T Consensus 413 ~~~~~~~~g~~~~~~~~--~~lW~~r~~~~~~l~-~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~~-~~l~~~~~~~g~~~ 488 (584)
T 2uuu_A 413 VFDILSKNAAFGLGSAP--GKTWAEKRYDLPYIR-DFLLDHNMWVDVAETTVSYANLQTLWKDAK-QTFVKHFKDQGIPA 488 (584)
T ss_dssp HHHHHHTTTCEEEEEES--TTHHHHGGGGHHHHH-HHHHTTTEEEEEEEEEEEHHHHHHHHHHHH-HHHHHHHHTTTCCE
T ss_pred HHHHHHHCCCccchHHH--HHHHHHhhhchHHHH-hhhcccCCccccceEEeeHHHHHHHHHHHH-HHHHhHHHhcCCee
Confidence 88777665554332211 111111111111111 1122211 124699999999999999874 4421 1111122
Q ss_pred EEecCCCCCCCCCCCccCCCcc-eEEe-eeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHH--------cCCCc--eecc
Q 008291 457 LIYPLNKSKWDNRTSVVIPEED-VFYL-VAFLSSAVPSSKGTDGLEHILTQNKRILEYCET--------ARLGV--KQYL 524 (571)
Q Consensus 457 ~~~p~~~~~~~~~~~~~~p~~~-~~~~-v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~--------~G~~~--~~Yl 524 (571)
.++...+.. . +.. ..++ +.+ ....+ +..+.+.+..+++.+.+.+ ||.|. +.|+
T Consensus 489 ~~~~h~gH~--------g-d~G~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~v~~~gGsiS~EHGiG~~k~~~l 553 (584)
T 2uuu_A 489 WICAHISHT--------Y-TNGVCLYFIFAS-KQNEN-----KDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWM 553 (584)
T ss_dssp EEEEEEEEE--------E-TTEEEEEEEEEE-ECCTT-----CCTHHHHHHHHHHHHHHHHTTCCCC-------------
T ss_pred EEEEEEEee--------c-CCCcEEEEEecc-CCCCh-----hhHHHHHHHHHHHHHHHHHcCCcEEecccCCcccHHHH
Confidence 222211100 0 011 1111 111 10001 1223333334444444333 33332 3455
Q ss_pred CCCCCHHHHHHhhch-hHHHHHHhhhcCCCCCCCCCCCc
Q 008291 525 PHYTTQEQWRSHFGP-QWEVFVQRKSTYDPLAILAPGQR 562 (571)
Q Consensus 525 ~~~~~~~~w~~~yG~-~~~~l~~lK~~yDP~~ifnPG~~ 562 (571)
+ ..+|+ .++.|++||+.|||+||||||+.
T Consensus 554 ~---------~~~g~~~~~lmr~iK~a~DP~gIlNPGki 583 (584)
T 2uuu_A 554 T---------RYATRGWINVYRSLKETIDPKDICNPRKL 583 (584)
T ss_dssp --------------CTHHHHHHHHHHHHCTTCCBSCCCC
T ss_pred H---------HhcCHHHHHHHHHHHHHcCCCcCCCCCCC
Confidence 4 44554 58999999999999999999964
No 6
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.6e-43 Score=382.14 Aligned_cols=434 Identities=13% Similarity=0.125 Sum_probs=280.2
Q ss_pred eeecc---hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCc--CCCcEEEEc
Q 008291 92 HLNFD---EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQ--AHQGVVINM 166 (571)
Q Consensus 92 ~v~~~---~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~--~~~givIdl 166 (571)
.+.++ .+....+.|+.++.+.|.+|++|+|++||+++|++|++ +++||++||||||+.|.+. ..+||+|||
T Consensus 13 ~v~~p~~~~y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~----~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl 88 (473)
T 3rja_A 13 PIDIPGTADYERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKK----LNLKVSAKSGGHSYASFGFGGENGHLMVQL 88 (473)
T ss_dssp CBCCTTSHHHHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHH----TTCCEEEESSCCCTTCGGGTSSSSCEEEEC
T ss_pred cEECCCCCchHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHH----cCCeEEEEcCCCCCCCCcccCCCCeEEEEC
Confidence 35554 57777888988889999999999999999999999999 9999999999999986543 357899999
Q ss_pred CCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCC-CccCCCCCCCceeecccccCCccCCCcccccCccccEEEEEE
Q 008291 167 ESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYG-LAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEV 245 (571)
Q Consensus 167 ~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~G-l~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~lev 245 (571)
++||+| .++|.++ .+|+||||++|.+|++++.++| +..+. +....++|||.++++|+|..+.+||.++|+|++++|
T Consensus 89 ~~~~~i-~~vd~~~-~~v~v~aG~~~~~l~~~l~~~G~~~~p~-G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~v 165 (473)
T 3rja_A 89 DRMIDV-ISYNDKT-GIAHVEPGARLGHLATVLNDKYGRAISH-GTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTV 165 (473)
T ss_dssp TTCCCE-EEEETTT-TEEEECTTCBHHHHHHHHHHHHSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEE
T ss_pred CCCCce-EEEcCCC-CEEEECCCCCHHHHHHHHHHcCCEEecc-CCCCCcEeeeeccCCCCCcccccccchHhheeeEEE
Confidence 999996 4588877 8999999999999999999999 65444 344578999999999999999999999999999999
Q ss_pred EecCCeEEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCC--HHHHHHHHHHHHhc-C-Cccccc
Q 008291 246 VTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSD--FATFARDQEYLISA-E-KTFDYI 321 (571)
Q Consensus 246 V~~~G~i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~--~~~~~~~~~~l~~~-~-~~~e~v 321 (571)
|++||+++++++++|+||||+++||+|+|||||+++||++|.|+.+..+.+.|.. .+++.+.+..+.+. . ...+-+
T Consensus 166 V~a~G~v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 245 (473)
T 3rja_A 166 VLADGRIVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARWVAPREV 245 (473)
T ss_dssp ECTTSCEEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHHTCCTTE
T ss_pred EecCCeEEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhhCCChhH
Confidence 9999999999998899999999999999999999999999999877666655543 33344433333221 1 111111
Q ss_pred cceEEeccccccccccccCCCCCccccccCCCCCCeEEEEEEeeecCCCChHHHHHHHHHHHhhcccCCCeeeec-cchh
Q 008291 322 EGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLS-EVSY 400 (571)
Q Consensus 322 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~-dv~y 400 (571)
..... +. + ... + .+.. . |.| +.++.++.++++++.... +...... +.+|
T Consensus 246 ~~~~~-------------~~----------~-~~~-~-~~~~-~-~~G-~~~~~~~~l~pl~~~~p~-~~~~~~~~~~~~ 295 (473)
T 3rja_A 246 NFRIG-------------DY----------G-AGN-P-GIEG-L-YYG-TPEQWRAAFQPLLDTLPA-GYVVNPTTSLNW 295 (473)
T ss_dssp EEEEE-------------ES----------S-SSC-C-EEEE-E-EES-CHHHHHHHHHHHHTTSCT-TCEECCCEEECH
T ss_pred EEEEE-------------Ec----------C-CCc-E-EEEE-E-ecC-CHHHHHHHHHHHHHhCCC-CcceeeecccCH
Confidence 11000 00 0 011 1 1111 1 333 455565566666654320 0111122 3444
Q ss_pred hhhhhhhhhhHHHHHhccccc-CC---ccceecccCcccHHHHHHHHHHhhhcccC-C-ccEEEecCCC----CCCCCCC
Q 008291 401 IEFLDRVHVSEVKLRSKGLWE-VP---HPWLNLFIPQSKIHDFAREVFGNILAETS-N-GPILIYPLNK----SKWDNRT 470 (571)
Q Consensus 401 ~~~l~~~~~~~~~~~~~~~W~-~r---~~~~d~~vP~s~i~~f~~~v~~~il~~~~-~-g~i~~~p~~~----~~~~~~~ 470 (571)
.+....... ....+...-.. .+ +.....-+|.+.+..+.+.+. +...... . ..+.+.+..+ .......
T Consensus 296 ~~~~~~~~~-~~~~~~~~~~~~~~~~~ks~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~ 373 (473)
T 3rja_A 296 IESVLSYSN-FDHVDFITPQPVENFYAKSLTLKSIKGDAVKNFVDYYF-DVSNKVKDRFWFYQLDVHGGKNSQVTKVTNA 373 (473)
T ss_dssp HHHHHHTSS-SSCCCCSSCCCCBEEEEEEEEESCCTTHHHHHHHHHHH-HTGGGCCSSEEEEEEEECCSTTCGGGGSCTT
T ss_pred HHHHHhhhc-CCCcccccCCCCCcceEeccccCCCCHHHHHHHHHHHH-hcCCCCCCcceEEEEEecCCcchhhcCCCCC
Confidence 443211100 00001000000 00 011223456666766666542 2111111 1 1344555543 1222345
Q ss_pred CccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCceeccCCCCC---HHHHH-HhhchhHHHHHH
Q 008291 471 SVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTT---QEQWR-SHFGPQWEVFVQ 546 (571)
Q Consensus 471 ~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~~~Yl~~~~~---~~~w~-~~yG~~~~~l~~ 546 (571)
.+.+|+++..+.+..+..+......++....+.++..+.+..... ......|+||-.. .++|. .+||.+++||++
T Consensus 374 ~TAf~hR~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~YvNy~d~~~~~~~~~~~yyg~n~~RL~~ 452 (473)
T 3rja_A 374 ETAYPHRDKLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALP-KSDWGMYINYADPRMDRDYATKVYYGENLARLQK 452 (473)
T ss_dssp TSSCCCTTCSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSC-GGGEECCGGGCCCSSCHHHHHHHHHGGGHHHHHH
T ss_pred CCccccCCccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCC-CCCCceEecCCCccccchhHHHHHHHHHHHHHHH
Confidence 577888887666655544321111122334445444443321110 1112379998432 36785 678999999999
Q ss_pred hhhcCCCCCCCCCCCcccC
Q 008291 547 RKSTYDPLAILAPGQRIFQ 565 (571)
Q Consensus 547 lK~~yDP~~ifnPG~~If~ 565 (571)
+|++|||+|+|+..|.|.+
T Consensus 453 vK~kyDP~n~F~~~qsI~p 471 (473)
T 3rja_A 453 LKAKFDPTDRFYYPQAVRP 471 (473)
T ss_dssp HHHHHCTTCTTCCTTSCCC
T ss_pred HhhccCchhhCCCCcCCCC
Confidence 9999999999999999964
No 7
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.8e-43 Score=387.14 Aligned_cols=200 Identities=18% Similarity=0.226 Sum_probs=170.6
Q ss_pred hccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCc----CCCcEEEEcCCCCCCeEEEeCC
Q 008291 104 DFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQ----AHQGVVINMESLQGPKMQVYAE 179 (571)
Q Consensus 104 d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~----~~~givIdl~~l~~i~i~i~~~ 179 (571)
.|+.....+|.+||+|+|++||+++|++|++ +++||++|||||++.|.+. .++|++|||++||+ +++|.+
T Consensus 44 rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~----~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~--v~~d~~ 117 (500)
T 3tsh_A 44 RWSSPDNVKPLYIITPTQVSHIQSAVVCGRR----HSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRA--VWVDGK 117 (500)
T ss_dssp TTTSTTSCCCSEEECCSSHHHHHHHHHHHHH----TTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCC--EEEETT
T ss_pred cccCCCCCCceEEEEcCCHHHHHHHHHHHHH----CCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCC--EEECCC
Confidence 3777778899999999999999999999999 9999999999999887653 25799999999998 588888
Q ss_pred cceEEEEcCCCcHHHHHHHHHhCCCc-cCCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEEcCCC
Q 008291 180 NSFYVDVSGGELWINILHESVKYGLA-PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEK 258 (571)
Q Consensus 180 ~~~~v~v~aG~~~~~l~~~l~~~Gl~-~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~~~~~ 258 (571)
. .+|+||||++|.||+++|.++|+. +...+.+..++|||.++++|+|..+.+||..+|||+++|||++||++++.+ .
T Consensus 118 ~-~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~-~ 195 (500)
T 3tsh_A 118 A-RTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKK-S 195 (500)
T ss_dssp T-TEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHH-H
T ss_pred C-CEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhheeeEEEECCCceEEECC-C
Confidence 8 899999999999999999999963 223344467889999999999999999999999999999999999988654 4
Q ss_pred CCCchhHhhhcC-CCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 259 QNSELFHSVLGG-LGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 259 ~~~dL~~~~~Gs-~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
+|+||||+++|| +|+|||||++++|++|.|+.+..+...+...+.+.+.+..+
T Consensus 196 ~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~ 249 (500)
T 3tsh_A 196 MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKW 249 (500)
T ss_dssp HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHH
T ss_pred CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHH
Confidence 678999999965 57999999999999999998766666665444444444443
No 8
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=4.5e-43 Score=382.18 Aligned_cols=439 Identities=15% Similarity=0.177 Sum_probs=280.9
Q ss_pred cCCCeeecc---hhhhHh------hhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCc-
Q 008291 88 TLDGHLNFD---EVHNAA------RDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQ- 157 (571)
Q Consensus 88 ~~~g~v~~~---~~~~~~------~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~- 157 (571)
.+++.|.++ .+.... ..|+......|.+||+|+|++||+++|++|++ +++||++||||||+.|.+.
T Consensus 20 ~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~----~~~~v~vrggGh~~~g~~~~ 95 (518)
T 3vte_A 20 ANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKK----VGLQIRTRSGGHDAEGMSYI 95 (518)
T ss_dssp --CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHH----HTCEEEEESSCCCTTCTTTC
T ss_pred CCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHH----cCCcEEEECCCcCCCCCccC
Confidence 567888886 454432 25777678999999999999999999999999 9999999999999998874
Q ss_pred -CCCcEEEEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCC--CccCCCCCCCceeecccccCCccCCCccccc
Q 008291 158 -AHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYG--LAPKSWTDYLHLTVGGTLSNAGISGQAFQHG 234 (571)
Q Consensus 158 -~~~givIdl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G 234 (571)
..+||+|||++||+ +++|.++ .+|+||||++|.+|+++|.++| +..+. +....++|||.++++|+|..+.+||
T Consensus 96 ~~~~gvvIdl~~l~~--i~vd~~~-~~v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgvgG~~~gGg~G~~s~~~G 171 (518)
T 3vte_A 96 SQVPFVVVDLRNMHS--IKIDVHS-QTAWVEAGATLGEVYYWINEKNENLSFPG-GYCPTVGVGGHFSGGGYGALMRNYG 171 (518)
T ss_dssp CSSSEEEEECTTCCC--EEEETTT-TEEEEETTCBHHHHHHHHHHHCTTEECCC-CSCTTCBHHHHHHTCCCCTTHHHHC
T ss_pred CCCCeEEEECCCCce--eEEeCCC-CEEEEeCCccHHHHHHHHHHhCCCceecC-CCCCCeeeeeeeCCCCCccccCCCC
Confidence 35899999999999 5788877 8999999999999999999875 54333 3335788999999999999999999
Q ss_pred CccccEEEEEEEecCCeEEEcCCCCCCchhHhhhcC-CCCceEEEEEEEeeeecCCceEEEEEEeC-CHHHHHHHHHHHH
Q 008291 235 PQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGG-LGQFGIITRARISLEPAPDMVKWIRVLYS-DFATFARDQEYLI 312 (571)
Q Consensus 235 ~~~d~v~~levV~~~G~i~~~~~~~~~dL~~~~~Gs-~G~~GIIt~~tl~l~p~p~~~~~~~~~~~-~~~~~~~~~~~l~ 312 (571)
.++|+|++++||++||+++++ +.+|+||||+++|| +|+|||||+++||++|.|+.+..+.+.+. +.+++.+.+..+.
T Consensus 172 ~~~D~V~~~evV~adG~iv~~-~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~ 250 (518)
T 3vte_A 172 LAADNIIDAHLVNVDGKVLDR-KSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQ 250 (518)
T ss_dssp CGGGGEEEEEEECTTCCEECH-HHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHH
T ss_pred chhheEEEEEEEccCCeEEEe-eccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence 999999999999999999975 34578999999998 89999999999999999987666555553 4455555444443
Q ss_pred hc-CCccccccceEEeccccccccccccCCCCCccccccCCCCCCe-EEEEEEeeecCCCChHHHHHHHHHHHhhcccCC
Q 008291 313 SA-EKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQT-LFCLELAKYINKDEKDLVNQEVESSLSVLNYIP 390 (571)
Q Consensus 313 ~~-~~~~e~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~le~~~~~~~~~~~~~~~~l~~ll~~l~~~~ 390 (571)
+. +...+=+.....+.. . +..+ ..+..+.. .+.+. .. |.| +.+++.+.+++++..+...
T Consensus 251 ~~~~~~p~~l~~~~~~~~----------~-~~~p----~~~~~~~~~~~~~~-~~-~~G-~~~~~~~~l~~~~~~lg~~- 311 (518)
T 3vte_A 251 NIAYKYDKDLVLMTHFIT----------K-NITD----NHGKNKTTVHGYFS-SI-FHG-GVDSLVDLMNKSFPELGIK- 311 (518)
T ss_dssp HHGGGSCTTEEEEEEEEE----------E-SCC-----------CEEEEEEE-EE-EES-CHHHHHHHHHHHCGGGCCC-
T ss_pred HHHHcCCHhHeEEEEEcc----------c-CCCC----CCCcCCCceEEEEE-EE-EeC-CHHHHhhhhhhhhhhcCCC-
Confidence 31 111111111111110 0 0000 01111121 22222 22 443 4444544455444333211
Q ss_pred CeeeeccchhhhhhhhhhhhH------HH---HH--------hcccccCCccceecccCcccHHHHHHHHHHhhhcc-cC
Q 008291 391 STLFLSEVSYIEFLDRVHVSE------VK---LR--------SKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAE-TS 452 (571)
Q Consensus 391 ~~~~~~dv~y~~~l~~~~~~~------~~---~~--------~~~~W~~r~~~~d~~vP~s~i~~f~~~v~~~il~~-~~ 452 (571)
.....+.+|.+ .+.... .. .. ....|+.....+.--+|.+.+..+.+.+ ... ..
T Consensus 312 -~~~~~~~~w~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~----~~~~~~ 383 (518)
T 3vte_A 312 -KTDCKEFSWID---TTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKL----YEEDVG 383 (518)
T ss_dssp -GGGEEEECHHH---HHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGG----GGSCTT
T ss_pred -ccceeecchhh---hhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHH----HhCCCC
Confidence 01112233332 111000 00 00 0011111111222335666666555532 221 22
Q ss_pred CccEEEecCCCCC-CCCCCCccCCCcc-eEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC-C-ceeccCCCC
Q 008291 453 NGPILIYPLNKSK-WDNRTSVVIPEED-VFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARL-G-VKQYLPHYT 528 (571)
Q Consensus 453 ~g~i~~~p~~~~~-~~~~~~~~~p~~~-~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~-~-~~~Yl~~~~ 528 (571)
...+.+.+..+.- ......+.+|+++ ..+.+.....+.. ++..+...++.+++.+.....-. + ...|+||-.
T Consensus 384 ~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~----~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D 459 (518)
T 3vte_A 384 AGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEK----QEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRD 459 (518)
T ss_dssp TEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEECC----TTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCC
T ss_pred CeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecCC----cchhHHHHHHHHHHHHHhccccCCCCccccccCCC
Confidence 3456777776432 2234567888888 4566555554422 23445667778888876643211 1 236999832
Q ss_pred ---C------------HHHHH-HhhchhHHHHHHhhhcCCCCCCCCCCCcccCC
Q 008291 529 ---T------------QEQWR-SHFGPQWEVFVQRKSTYDPLAILAPGQRIFQK 566 (571)
Q Consensus 529 ---~------------~~~w~-~~yG~~~~~l~~lK~~yDP~~ifnPG~~If~~ 566 (571)
. ...|. .+||.+++||+++|++|||.|+|+..|.|.+.
T Consensus 460 ~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~ 513 (518)
T 3vte_A 460 LDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPL 513 (518)
T ss_dssp GGGCCCCTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccccccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCC
Confidence 1 12474 78999999999999999999999999999653
No 9
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=2.3e-42 Score=374.45 Aligned_cols=428 Identities=17% Similarity=0.221 Sum_probs=280.3
Q ss_pred ccCCCeeecc---hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcCCCcEE
Q 008291 87 LTLDGHLNFD---EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVV 163 (571)
Q Consensus 87 ~~~~g~v~~~---~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~~~giv 163 (571)
+.++|.|.++ .+....+.|+..+...|.+|++|+|++||+++|++|++ +++||++||||||+.|.+...+|++
T Consensus 10 l~~~~~v~~p~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~----~~~~~~v~ggGh~~~~~~~~~~gvv 85 (459)
T 2bvf_A 10 LSIQGEVIYPDDSGFDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYACD----NGLEISVRSGGHNPNGYATNDGGIV 85 (459)
T ss_dssp CCCSSEEECTTSTTHHHHHCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHH----HTCCEEEESSCCCTTCTTCCSSSEE
T ss_pred ccCCceEECCCCccHHHHHHHhhhhccCCCCEEEecCCHHHHHHHHHHHHH----cCCcEEEEcCCcCCCCccccCCeEE
Confidence 4678888886 56667788998889999999999999999999999999 9999999999999998876668999
Q ss_pred EEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCCcccccCccccEEEE
Q 008291 164 INMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQL 243 (571)
Q Consensus 164 Idl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~l 243 (571)
|||++||+ +++|+++ .+|+||||++|.+|+++|.++|++.+... ...++|||.+.++|+|..+.+||.++|+|+++
T Consensus 86 i~l~~l~~--i~~d~~~-~~v~v~aG~~~~~l~~~l~~~Gl~~~~g~-~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~ 161 (459)
T 2bvf_A 86 LDLRLMNS--IHIDTAG-SRARIGGGVISGDLVKEAAKFGLAAVTGM-HPKVGFCGLALNGGVGFLTPKYGLASDNILGA 161 (459)
T ss_dssp EECTTCCC--EEEETTT-TEEEEETTCBHHHHHHHHHTTTEEECCCS-CTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEE
T ss_pred EECCCCCC--EEECCCC-CEEEECCCCCHHHHHHHHHHcCCEecCCC-CCCcccceeecCCCCccccccccCHhHhEEEE
Confidence 99999999 4788777 89999999999999999999999755533 35689999999999999999999999999999
Q ss_pred EEEecCCeEEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCC--HH--HHHHHHHHHHhc-CCcc
Q 008291 244 EVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSD--FA--TFARDQEYLISA-EKTF 318 (571)
Q Consensus 244 evV~~~G~i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~--~~--~~~~~~~~l~~~-~~~~ 318 (571)
|||++||+++++++.+|+||||+++||+|+|||||+++||++|.|+......+.|+. .+ ++.++...+... +...
T Consensus 162 ~vV~~~G~i~~~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (459)
T 2bvf_A 162 TLVTATGDVIYCSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNEMADHI 241 (459)
T ss_dssp EEECTTSCEEEEESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTC
T ss_pred EEEcCCCeEEEeCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHhCcHhh
Confidence 999999999999999999999999999999999999999999997666666666764 33 333333333321 1111
Q ss_pred ccccceEEeccccccccccccCCCCCccccccCCCCCCeEEEEEEeeecCCCChHHHHHHHHHHHhhcccCCCeeeeccc
Q 008291 319 DYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEV 398 (571)
Q Consensus 319 e~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~dv 398 (571)
.... .... ...+...+.+ ...|.+ +.++.++.++++.+..... .......
T Consensus 242 --~~~~-~~~~----------------------~~~~~~~~~~--~~~~~g-~~~~~~~~~~~~~~~~~~~--~~~~~~~ 291 (459)
T 2bvf_A 242 --YPSV-FVGV----------------------DENRAPSVTV--CVGHLG-GLDIAERDIARLRGLGRTV--SDSIAVR 291 (459)
T ss_dssp --CCEE-EEEE----------------------CTTCCEEEEE--EEECCS-CHHHHHHHHHHHHTTSCCS--EECCEEE
T ss_pred --cccc-ccCc----------------------ccCCCceEEE--EEEEeC-CHHHHHHHHHHHHHhCcch--hcceeec
Confidence 1000 0000 0011122211 112554 4444555555555432111 1111233
Q ss_pred hhhhhhhhhhhhHHHHHhcccccCCccc--eecccCcccHHHHHHHHHHhhhccc--CC--ccEEEecCCCCCCCCCCCc
Q 008291 399 SYIEFLDRVHVSEVKLRSKGLWEVPHPW--LNLFIPQSKIHDFAREVFGNILAET--SN--GPILIYPLNKSKWDNRTSV 472 (571)
Q Consensus 399 ~y~~~l~~~~~~~~~~~~~~~W~~r~~~--~d~~vP~s~i~~f~~~v~~~il~~~--~~--g~i~~~p~~~~~~~~~~~~ 472 (571)
+|.++... ....+.. --..+.-+ -..++|.+...+.++.+. +.+... .. ..+.++ .. +.......
T Consensus 292 ~~~~~~~~----~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~--gg-~~~~~~~t 362 (459)
T 2bvf_A 292 SYDEVVAL----NAEVGSF-EDGMSNLWIDREIAMPNARFAEAIAGNL-DKFVSEPASGGSVKLEIE--GM-PFGNPKRT 362 (459)
T ss_dssp CHHHHHHH----HHHHSCC-CCSCEEEEEEEEECSCHHHHHHHHHTTG-GGCEEETTTTEEEEEEEE--CC-CCCCTTCC
T ss_pred CHHHHHhc----ccccccC-CCCCcceEeccccccCCCCCHHHHHHHH-HHHhhCCCCCceeEEEEe--CC-ccCCCCCC
Confidence 44443211 0000000 00011123 356666554445555443 222222 11 233334 11 11112334
Q ss_pred cCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CceeccCCCCC--HHHHHHhhchh-HHHHHHh
Q 008291 473 VIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARL--GVKQYLPHYTT--QEQWRSHFGPQ-WEVFVQR 547 (571)
Q Consensus 473 ~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~--~~~~Yl~~~~~--~~~w~~~yG~~-~~~l~~l 547 (571)
.+++++..+ +.....+...... .+...+..+++.+....... ....|+|+-.. ++....+||++ |+||+++
T Consensus 363 a~~~R~~~~-~~~~~~w~~~~~~---~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~~~~~~~~yG~~n~~rL~~i 438 (459)
T 2bvf_A 363 PARHRDAMG-VLALAEWSGAAPG---SEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTAEMVAEVYKPEVYSRLAAV 438 (459)
T ss_dssp SSCCCSSCE-EEEEEEECTTSTT---TTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCCHHHHHHHHCHHHHHHHHHH
T ss_pred CcccCCcce-EEEEEEeCCCccc---hHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcchHHHHHHhCcchHHHHHHH
Confidence 567666544 4444433322101 12234445555555544331 11269998333 44446889987 9999999
Q ss_pred hhcCCCCCCCCCCCcccC
Q 008291 548 KSTYDPLAILAPGQRIFQ 565 (571)
Q Consensus 548 K~~yDP~~ifnPG~~If~ 565 (571)
|++|||+|+|.-.|.|.+
T Consensus 439 K~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 439 KREYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHHHCTTCCCCSSSCCCC
T ss_pred HHHhCcccccCCCCCCCC
Confidence 999999999999998864
No 10
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=1e-42 Score=385.44 Aligned_cols=426 Identities=14% Similarity=0.122 Sum_probs=285.3
Q ss_pred CCeeecc--hhhh----Hhhh------ccC--ccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCC-C
Q 008291 90 DGHLNFD--EVHN----AARD------FGN--RYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQ-G 154 (571)
Q Consensus 90 ~g~v~~~--~~~~----~~~d------~~~--~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~-g 154 (571)
..+|.+| +... |++| |+. .+...|.+||+|+|++||+++|++|++ +++||++||+|||+. |
T Consensus 34 ~~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~~----~~~pv~~~g~Gt~~~~g 109 (560)
T 1e8g_A 34 SENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANK----FSFPLWPISIGRNSGYG 109 (560)
T ss_dssp GGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHH----HTCCEEEESSCCCTTTT
T ss_pred cccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHHHH----cCCcEEEecCCCcCCcC
Confidence 3456666 4445 6666 443 467899999999999999999999999 999999999999986 6
Q ss_pred CCcC--CCcEEEEc-CCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCc---cCCCCCCCceeecccccCCccCC
Q 008291 155 QAQA--HQGVVINM-ESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLA---PKSWTDYLHLTVGGTLSNAGISG 228 (571)
Q Consensus 155 ~~~~--~~givIdl-~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~---~~~~~~~~~~tvGG~~~~~g~g~ 228 (571)
.+.+ .+||+||| ++||+| +++|+++ .+|+||||+++.+|+++|.++|++ |+++++...+||||+++++|.|.
T Consensus 110 g~~p~~~~gvvidl~~~mn~i-l~id~~~-~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~ 187 (560)
T 1e8g_A 110 GAAPRVSGSVVLDMGKNMNRV-LEVNVEG-AYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGY 187 (560)
T ss_dssp TTCCSSTTCEEEECTTTCCCE-EEEETTT-TEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCS
T ss_pred CCCCCcCCEEEEEchHhcCCe-EEEcCCC-CEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCc
Confidence 5442 58999999 999997 7999887 899999999999999999999998 33444444689999988776554
Q ss_pred CcccccCccccEEEEEEEecCCeEEEcCCC--CCC---------------chhHhh-hc----------CCCCceEEEEE
Q 008291 229 QAFQHGPQISNVHQLEVVTGKGEIINCSEK--QNS---------------ELFHSV-LG----------GLGQFGIITRA 280 (571)
Q Consensus 229 ~~~~~G~~~d~v~~levV~~~G~i~~~~~~--~~~---------------dL~~~~-~G----------s~G~~GIIt~~ 280 (571)
.+||.++|+|++++||++||++++++.. .++ +.+|.+ .| ++|+|||||++
T Consensus 188 --~~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~ 265 (560)
T 1e8g_A 188 --TPYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKI 265 (560)
T ss_dssp --STTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEE
T ss_pred --ccceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEE
Confidence 3999999999999999999999999863 231 333333 33 35899999999
Q ss_pred EEeeeecCCceEEEEEEeCCHHHHHHHHHH---HHh---cCCccccccceE----EeccccccccccccCCCCCcccccc
Q 008291 281 RISLEPAPDMVKWIRVLYSDFATFARDQEY---LIS---AEKTFDYIEGFV----MVNRTGLLNNWRSSFDPQDPVQASQ 350 (571)
Q Consensus 281 tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~---l~~---~~~~~e~vd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (571)
|||++|.|+....+.+.|++++++.+++.. ++. .+..+|++|... +... +. +.... ..
T Consensus 266 tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~p~~~el~d~~~~~~~l~~~----~~----~~~~~----~~ 333 (560)
T 1e8g_A 266 GIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHILLDAAVLGDK----RS----YSSRT----EP 333 (560)
T ss_dssp EEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHHHHHHHHCCG----GG----TCCCS----SC
T ss_pred EEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHcCCCcceeEEechHHHhhhhhhh----hh----hccCC----CC
Confidence 999999999988899999999887766544 443 245678887651 1000 00 11100 01
Q ss_pred CCC-----------CCCeEEEEEEeeecCCCChHHHHHHHHHHHhhcccCCCeee--eccchh-hhhhhhhhhh---HH-
Q 008291 351 FKS-----------DGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLF--LSEVSY-IEFLDRVHVS---EV- 412 (571)
Q Consensus 351 ~~~-----------~~~~~~~le~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~--~~dv~y-~~~l~~~~~~---~~- 412 (571)
+|. ...+.+++|+ ++ +.++++++++.+.+.+...++..+ ..+... ..|+.|.... ..
T Consensus 334 ~p~~~~~~l~~~~~~~~~~l~~e~----~g-~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~R~~~~~~~p~~ 408 (560)
T 1e8g_A 334 LSDEELDKIAKQLNLGRWNFYGAL----YG-PEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRVRDKTMQGIPTY 408 (560)
T ss_dssp CCHHHHHHHHHHHTCCSEEEEEEE----ES-CHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHHHHHHTTTCCCC
T ss_pred CCHHHHHHHHhhcCCCceEEEEEE----eC-CHHHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHHHHhhcccCchh
Confidence 111 2456788885 44 456677777777776665554322 222211 1122221110 00
Q ss_pred HHHhcccccC--CccceecccCc--ccHHHHHHHHHHhhhcccCCccEEEecCCCCCCCCCCCccCCCcceEEeeeecCC
Q 008291 413 KLRSKGLWEV--PHPWLNLFIPQ--SKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSS 488 (571)
Q Consensus 413 ~~~~~~~W~~--r~~~~d~~vP~--s~i~~f~~~v~~~il~~~~~g~i~~~p~~~~~~~~~~~~~~p~~~~~~~v~~l~~ 488 (571)
..-....|.. .+.|.|.++|. ++++++++.+ ++++...+.. +.++.. ..+..+++.+..+..
T Consensus 409 ~~~~~~~~~~~~~~~~~d~~vP~~~~~l~~~~~~~-~~~~~~~g~~-~~~~gH------------~gdGnlH~~i~~~~~ 474 (560)
T 1e8g_A 409 DELKWIDWLPNGAHLFFSPIAKVSGEDAMMQYAVT-KKRCQEAGLD-FIGTFT------------VGMREMHHIVCIVFN 474 (560)
T ss_dssp GGGGGGGGSTTEEEEEECBEECSSHHHHHHHHHHH-HHHHHHHTCC-CCEEEE------------ECSSCEEEEEEEEEE
T ss_pred hhhccccccCCCceEEEeeecCCCHHHHHHHHHHH-HHHHHHcCCc-eEEEEE------------ecCCeEEEEecccCC
Confidence 0001123433 23567999999 9999999987 4565332111 111111 112455555532211
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCce--e--ccCCCCCHHHHHHhh---ch-hHHHHHHhhhcCCCCCCCCCC
Q 008291 489 AVPSSKGTDGLEHILTQNKRILEYCETARLGVK--Q--YLPHYTTQEQWRSHF---GP-QWEVFVQRKSTYDPLAILAPG 560 (571)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~~--~--Yl~~~~~~~~w~~~y---G~-~~~~l~~lK~~yDP~~ifnPG 560 (571)
+ .+++..+...+..+++.+.+.++|.|.. . |++ .+...| |+ .++.|+++|+.|||+||||||
T Consensus 475 --~--~~~~~~~~~~~~~~~l~~~~~eHGiG~~k~~~~~l~------~~~~~~~~~g~~~~~lm~~iK~~~DP~gILNPG 544 (560)
T 1e8g_A 475 --K--KDLIQKRKVQWLMRTLIDDCAANGWGEYRTHLAFMD------QIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPG 544 (560)
T ss_dssp --T--TCHHHHHHHHHHHHHHHHHHHHTTCCBSCCCGGGHH------HHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCTT
T ss_pred --C--CCHHHHHHHHHHHHHHHHHHHHcCCcccccchhHHH------HHHHHhccCCHHHHHHHHHHHHHcCccCCCCCC
Confidence 1 1223455667778888888888998752 2 432 234566 65 699999999999999999999
Q ss_pred CcccC
Q 008291 561 QRIFQ 565 (571)
Q Consensus 561 ~~If~ 565 (571)
+ |+.
T Consensus 545 k-~~~ 548 (560)
T 1e8g_A 545 K-SGV 548 (560)
T ss_dssp G-GGC
T ss_pred c-ccc
Confidence 5 554
No 11
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=1.7e-43 Score=388.91 Aligned_cols=448 Identities=15% Similarity=0.175 Sum_probs=285.2
Q ss_pred ccccccCCCeeecc--hhhhHhhhccCc--cCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCC-CCCc
Q 008291 83 SLKTLTLDGHLNFD--EVHNAARDFGNR--YQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQ-GQAQ 157 (571)
Q Consensus 83 ~l~~~~~~g~v~~~--~~~~~~~d~~~~--~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~-g~~~ 157 (571)
+|+++.....|.++ .+..|.+||+.. +...|.+|++|+|++||+++|++|++ +++||++||+|||+. |.+.
T Consensus 23 ~L~~~l~~~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~----~~~pv~~~g~G~~~~~g~~~ 98 (520)
T 1wvf_A 23 KFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNE----HKIPIWTISTGRNFGYGSAA 98 (520)
T ss_dssp HHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHH----HTCCEEEESSCCCTTTTTTS
T ss_pred HHHHhcCCCeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHHHH----CCCcEEEEcCCCCCCCCCCC
Confidence 44443233457777 667899998875 67899999999999999999999999 999999999999987 7654
Q ss_pred C--CCcEEEEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCc-cCC-CCCCCceeecccccCCccCCCcccc
Q 008291 158 A--HQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLA-PKS-WTDYLHLTVGGTLSNAGISGQAFQH 233 (571)
Q Consensus 158 ~--~~givIdl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~-~~~-~~~~~~~tvGG~~~~~g~g~~~~~~ 233 (571)
+ .+||+|||++||+| +++|+++ .+|+||||++|.+|+++|.++|++ |.+ .++...+||||+++++|.|.. +|
T Consensus 99 ~~~~~gvvidl~~m~~i-~~id~~~-~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~y 174 (520)
T 1wvf_A 99 PVQRGQVILDLKKMNKI-IKIDPEM-CYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PY 174 (520)
T ss_dssp CSSTTCEEEECTTCCCE-EEEETTT-TEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TT
T ss_pred CCCCCeEEEECCCCCce-EEECCCC-CEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cc
Confidence 3 58999999999997 6999877 899999999999999999999996 444 344447899999887765553 99
Q ss_pred cCccccEEEEEEEecCCeEEEcCC--CCCCchhHhhhcCCC----------CceEEEEEEEeeeecCCceEEEEEEeCCH
Q 008291 234 GPQISNVHQLEVVTGKGEIINCSE--KQNSELFHSVLGGLG----------QFGIITRARISLEPAPDMVKWIRVLYSDF 301 (571)
Q Consensus 234 G~~~d~v~~levV~~~G~i~~~~~--~~~~dL~~~~~Gs~G----------~~GIIt~~tl~l~p~p~~~~~~~~~~~~~ 301 (571)
|.+.|+|+++|||++||++++++. .+|+|+|++.+|+.| +|||||+++||++|.|+....+.+.|+++
T Consensus 175 G~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~ 254 (520)
T 1wvf_A 175 GEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDE 254 (520)
T ss_dssp CBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCG
T ss_pred cchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCH
Confidence 999999999999999999999975 357888777777654 99999999999999999887888999998
Q ss_pred HHHHHHH---HHHHhc---CCccccccceEEecccc-ccccccccCCCCCccc-cccCC---CCCCeEEEEEEeeecCCC
Q 008291 302 ATFARDQ---EYLISA---EKTFDYIEGFVMVNRTG-LLNNWRSSFDPQDPVQ-ASQFK---SDGQTLFCLELAKYINKD 370 (571)
Q Consensus 302 ~~~~~~~---~~l~~~---~~~~e~vd~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~le~~~~~~~~ 370 (571)
+++.+++ ..+... +..+|++|...+..... ....|... ....+.. ...+. ....+.+++|+ ++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~----~g- 328 (520)
T 1wvf_A 255 ADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTE-PGHTPDSVIKQMQKDTGMGAWNLYAAL----YG- 328 (520)
T ss_dssp GGHHHHHHHHHHHHHTTSSCSCEEEEEHHHHHHHTTCCGGGTCCC-SSSCCHHHHHHHHHHHCCCSEEEEEEE----EE-
T ss_pred HHHHHHHHHHHHHHHcCCCccceEeccHHHHHHHhcccchhhccC-CCCCCHHHHHHHHHhcCCCceEEEEEE----eC-
Confidence 8776644 444432 56788888753211100 00000000 0000000 00000 01345666664 33
Q ss_pred ChHHHHHHHHHHHhhcccCCCeeeeccchhhh----hhhhhhhh----H-HHHHhcccccCC--ccceecccCc--ccHH
Q 008291 371 EKDLVNQEVESSLSVLNYIPSTLFLSEVSYIE----FLDRVHVS----E-VKLRSKGLWEVP--HPWLNLFIPQ--SKIH 437 (571)
Q Consensus 371 ~~~~~~~~l~~ll~~l~~~~~~~~~~dv~y~~----~l~~~~~~----~-~~~~~~~~W~~r--~~~~d~~vP~--s~i~ 437 (571)
+.+++++..+.+.+.+...++..+... .+.+ |..|.... . ... ....|... ..+.|..+|. ++++
T Consensus 329 ~~~~v~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~w~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~vp~~~~~l~ 406 (520)
T 1wvf_A 329 TQEQVDVNWKIVTDVFKKLGKGRIVTQ-EEAGDTQPFKYRAQLMSGVPNLQEF-GLYNWRGGGGSMWFAPVSEARGSECK 406 (520)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCEEEEH-HHHTTCTTHHHHHHHHTTCCCCGGG-GGGGSSCTEEEEEECBEEESCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEec-ccchhhhHHHHHHHhhccCchhhhh-ccccccCCCceEEeccccCCCHHHHH
Confidence 445666666665555543333221110 0000 10111000 0 000 01123210 1235777888 9999
Q ss_pred HHHHHHHHhhhcccCCccEEEecCCCCCCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC
Q 008291 438 DFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETAR 517 (571)
Q Consensus 438 ~f~~~v~~~il~~~~~g~i~~~p~~~~~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G 517 (571)
+|++.+ ++++...+.. +..+.. ..+..++..+..... . ..++..+...+..+++.+.+.++|
T Consensus 407 ~~~~~~-~~~~~~~~~~-~~~~gh------------~gdGnlH~~i~~~~~--~--~~~~~~~~~~~~~~~~~~~~~ehG 468 (520)
T 1wvf_A 407 KQAAMA-KRVLHKYGLD-YVAEFI------------VAPRDMHHVIDVLYD--R--TNPEETKRADACFNELLDEFEKEG 468 (520)
T ss_dssp HHHHHH-HHHHHHTTCC-CCEEEE------------ECSSEEEEEEEEEEE--T--TCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH-HHHHHHcCCC-eeEeec------------ccCcceeeeeccccC--C--CCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999987 4555321111 111111 012333333321110 1 111233455566777777777888
Q ss_pred CCceeccCCCCCHHHH-HHhhch-hHHHHHHhhhcCCCCCCCCCCCcccCCCC
Q 008291 518 LGVKQYLPHYTTQEQW-RSHFGP-QWEVFVQRKSTYDPLAILAPGQRIFQKAM 568 (571)
Q Consensus 518 ~~~~~Yl~~~~~~~~w-~~~yG~-~~~~l~~lK~~yDP~~ifnPG~~If~~~~ 568 (571)
.|... .. ...-+| ...||+ .++.|++||+.|||+||||||+ |+.++.
T Consensus 469 ~G~~k--~~-~~~~~~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGk-i~~~~~ 517 (520)
T 1wvf_A 469 YAVYR--VN-TRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGR-SGIDLN 517 (520)
T ss_dssp CCBSC--CC-GGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCTTG-GGCCTT
T ss_pred CCccc--cC-hhHhhhhhhhcCHHHHHHHHHHHHHcCCCCCCCCCc-CCCCcc
Confidence 76521 00 001111 356776 5899999999999999999996 544443
No 12
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=1.1e-42 Score=378.00 Aligned_cols=420 Identities=17% Similarity=0.199 Sum_probs=275.1
Q ss_pred hhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC--CCcEEEEcCCCCCCeEEEeCCc
Q 008291 103 RDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA--HQGVVINMESLQGPKMQVYAEN 180 (571)
Q Consensus 103 ~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~--~~givIdl~~l~~i~i~i~~~~ 180 (571)
..|+......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+.. .+|++|||++||+ +++|.++
T Consensus 36 ~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~----~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~--i~vd~~~ 109 (495)
T 3fw9_A 36 PLFQNSLISKPSAIILPGSKEELSNTIRCIRK----GSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNR--VSIDLES 109 (495)
T ss_dssp GGGCSTTSCCCSEEECCCSHHHHHHHHHHHHT----SSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCC--EEEETTT
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHH----cCCeEEEECCCcCCCCccccCCCCeEEEECCCCCc--EEEeCCC
Confidence 46777678899999999999999999999999 99999999999999988765 3689999999999 5888877
Q ss_pred ceEEEEcCCCcHHHHHHHHHhC--CCccCCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEEcCCC
Q 008291 181 SFYVDVSGGELWINILHESVKY--GLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEK 258 (571)
Q Consensus 181 ~~~v~v~aG~~~~~l~~~l~~~--Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~~~~~ 258 (571)
.+|+||||++|.+|++++.++ |+..+. +....++|||.++++|+|..+.+||.++|+|++++||++||++++ ++.
T Consensus 110 -~~v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~-~~~ 186 (495)
T 3fw9_A 110 -ETAWVESGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILD-RQA 186 (495)
T ss_dssp -TEEEEETTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEEC-HHH
T ss_pred -CEEEEcCCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEE-cCC
Confidence 899999999999999999999 775444 344678999999999999999999999999999999999999997 344
Q ss_pred CCCchhHhhhc-CCCCceEEEEEEEeeeecCCceEEEEEEeC-CHHHHHHHHHHHHhcCCccccccceEEeccccccccc
Q 008291 259 QNSELFHSVLG-GLGQFGIITRARISLEPAPDMVKWIRVLYS-DFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNW 336 (571)
Q Consensus 259 ~~~dL~~~~~G-s~G~~GIIt~~tl~l~p~p~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~e~vd~~~~~~~~~~~~~~ 336 (571)
+++||||+++| ++|+|||||+++||++|.|+.+..+.+.+. +.+++.+.+..+.+.. .+.-+...+.-. .
T Consensus 187 ~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~--~~~~~~l~~~~~---~--- 258 (495)
T 3fw9_A 187 MGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVA--EELEEDFTLSVL---G--- 258 (495)
T ss_dssp HCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHH--HHSCTTEEEEEE---E---
T ss_pred CChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHH--hcCChhHeEEEE---E---
Confidence 68899999999 789999999999999999998777766664 3345544444433210 011111111000 0
Q ss_pred cccCCCCCccccccCCCCCCeEEEEEEeeecCCCChHHHHHHHHHHHhhcccCCCeeeeccchhhhhhhhhhh-h-HHHH
Q 008291 337 RSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHV-S-EVKL 414 (571)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~dv~y~~~l~~~~~-~-~~~~ 414 (571)
.+........+. .. |.+ +.+++.+.+++++..+... .....+.+|.+....... . .+.+
T Consensus 259 --------------~~~~~~~~~~~~-~~-~~G-~~~~~~~~l~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~l 319 (495)
T 3fw9_A 259 --------------GADEKQVWLTML-GF-HFG-LKTVAKSTFDLLFPELGLV--EEDYLEMSWGESFAYLAGLETVSQL 319 (495)
T ss_dssp --------------EEETTEEEEEEE-EE-ESS-CHHHHHHHHHHHCGGGCCC--GGGCEEECHHHHHHHHTTCSCGGGG
T ss_pred --------------cCCCCceEEEEE-EE-EeC-CHHHHHHHHHHhhhhcCCC--ccceEEcCHHHHHHHHhcccchhhh
Confidence 000111122222 22 443 4444544444443333110 111123344332111000 0 0000
Q ss_pred -Hh-----cccccCCccceecccCcccHHHHHHHHHHhhhcccCCccEEEecCCCCC-CCCCCCccCCCcc-eEEeeeec
Q 008291 415 -RS-----KGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSK-WDNRTSVVIPEED-VFYLVAFL 486 (571)
Q Consensus 415 -~~-----~~~W~~r~~~~d~~vP~s~i~~f~~~v~~~il~~~~~g~i~~~p~~~~~-~~~~~~~~~p~~~-~~~~v~~l 486 (571)
.. ...|..+...+.--+|.+.+..+.+.+. +.....+.+.+..+.- ......+.+|+++ ..+.+...
T Consensus 320 ~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~-----~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~ 394 (495)
T 3fw9_A 320 NNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLS-----KEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYI 394 (495)
T ss_dssp GCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHH-----HCTTEEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEE
T ss_pred cCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHh-----hCCCcEEEecccCCccccCCCCCCCccccCccceEEEEE
Confidence 00 0111111112233366666766666542 1223456677775432 2234557788887 55555555
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ceeccCCCCC-------------------HHHH-HHhhchhHHHH
Q 008291 487 SSAVPSSKGTDGLEHILTQNKRILEYCETARLG--VKQYLPHYTT-------------------QEQW-RSHFGPQWEVF 544 (571)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~--~~~Yl~~~~~-------------------~~~w-~~~yG~~~~~l 544 (571)
..+... +++..++..++.+++.+.......+ ...|+||-.. ...| ..+||.+++||
T Consensus 395 ~~w~~~--~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL 472 (495)
T 3fw9_A 395 VAWNQS--EQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERL 472 (495)
T ss_dssp EEECGG--GGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHH
T ss_pred EecCCC--CcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHH
Confidence 544211 1223455667778888776533221 2379998321 1257 47899999999
Q ss_pred HHhhhcCCCCCCCCCCCcccC
Q 008291 545 VQRKSTYDPLAILAPGQRIFQ 565 (571)
Q Consensus 545 ~~lK~~yDP~~ifnPG~~If~ 565 (571)
+++|++|||+|+|+..|.|.+
T Consensus 473 ~~vK~~yDP~n~F~~~qsI~p 493 (495)
T 3fw9_A 473 IRAKTLIDPNNVFNHPQSIPP 493 (495)
T ss_dssp HHHHHHHCTTCCSCCTTCCCC
T ss_pred HHHHHhhCcHhhCCCCCCCCC
Confidence 999999999999999999964
No 13
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=6.1e-45 Score=400.74 Aligned_cols=236 Identities=13% Similarity=0.079 Sum_probs=203.6
Q ss_pred cccccccCCCeeecc--hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcCC
Q 008291 82 YSLKTLTLDGHLNFD--EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAH 159 (571)
Q Consensus 82 ~~l~~~~~~g~v~~~--~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~~ 159 (571)
.+|+++...++|.++ +...|++||+. +...|.+||+|+|++||+++|++|++ +++||++||||||+.|++.+.
T Consensus 14 ~~L~~~~g~~~v~~~~~~~~~y~~d~~~-~~~~p~~Vv~P~s~~eV~~iv~~a~~----~~~~v~~~GgGt~~~G~~~~~ 88 (571)
T 1f0x_A 14 NELARLVGSSHLLTDPAKTARYRKGFRS-GQGDALAVVFPGSLLELWRVLKACVT----ADKIILMQAANTGLTEGSTPN 88 (571)
T ss_dssp HHHHHHHCGGGEECCHHHHHHHHBCSSS-CBBCCSEEECCSSHHHHHHHHHHHHH----TTCEEEEESSCCCSSSTTSCC
T ss_pred HHHHHhcCCCeEEcCHHHHHHHhccccc-cCCCccEEEeeCCHHHHHHHHHHHHH----cCCCEEEECCCcCCCCCccCC
Confidence 356655455788888 57789999984 78999999999999999999999999 999999999999999888774
Q ss_pred C------cEEEEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCcc-CCCCC-CCceeecccccCCccCCCcc
Q 008291 160 Q------GVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAP-KSWTD-YLHLTVGGTLSNAGISGQAF 231 (571)
Q Consensus 160 ~------givIdl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~~-~~~~~-~~~~tvGG~~~~~g~g~~~~ 231 (571)
+ ||+|||++||+| +++|+ + .+|+||||++|.+|.++|.++|+.+ .++++ +..+||||+++++++|..+.
T Consensus 89 ~~~~~r~gvvIdl~rmn~I-~~id~-~-~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~ 165 (571)
T 1f0x_A 89 GNDYDRDVVIISTLRLDKL-HVLGK-G-EQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ 165 (571)
T ss_dssp BSCCSSCEEEEECTTCCCE-EEETT-T-TEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTT
T ss_pred CcCCcCceEEEECcccCCc-eeECC-C-CeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCccccc
Confidence 3 899999999998 78885 4 6899999999999999999999964 44432 23679999999888888999
Q ss_pred cccCccc----------------cEEEEEEEecCCeEEEcCC---------------CCC--C-----------------
Q 008291 232 QHGPQIS----------------NVHQLEVVTGKGEIINCSE---------------KQN--S----------------- 261 (571)
Q Consensus 232 ~~G~~~d----------------~v~~levV~~~G~i~~~~~---------------~~~--~----------------- 261 (571)
+||.+.| ||+++++|+++|++++++. +++ +
T Consensus 166 ~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~ 245 (571)
T 1f0x_A 166 RGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNA 245 (571)
T ss_dssp SCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTT
T ss_pred CCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccc
Confidence 9999999 9999999999999998763 222 3
Q ss_pred chhHhh--hcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHHHh-c---CCccccccceEE
Q 008291 262 ELFHSV--LGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLIS-A---EKTFDYIEGFVM 326 (571)
Q Consensus 262 dL~~~~--~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l~~-~---~~~~e~vd~~~~ 326 (571)
||++++ +||+|+||| |++|++++|.|+....+.+.|++++++.+++..+.+ . +..+|++|...+
T Consensus 246 Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~a~E~~d~~~~ 315 (571)
T 1f0x_A 246 DPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIY 315 (571)
T ss_dssp CGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHCSSCCSEEEEEEHHHH
T ss_pred cHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEECHHHH
Confidence 999999 999999999 999999999999988888999999999999998884 2 567888887544
No 14
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=3.7e-41 Score=366.96 Aligned_cols=436 Identities=14% Similarity=0.146 Sum_probs=275.8
Q ss_pred cCCCeeecc---hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-CCcEE
Q 008291 88 TLDGHLNFD---EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA-HQGVV 163 (571)
Q Consensus 88 ~~~g~v~~~---~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~-~~giv 163 (571)
.+.+.+.++ .+....+.|+.++...|.+|++|+|++||+++|++|++ +++||++|||||++.|.+.. .+|++
T Consensus 7 s~~~~~~~p~~~~y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~----~~~~v~vrggGh~~~g~~~~~~~gvv 82 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVT----EGRGVACRSGGHCGQDFVGTPRRDLV 82 (501)
T ss_dssp --CCEEEETTSTTHHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHHHH----TTCCEEEESSCCCSSSTTTSSCCSEE
T ss_pred cCCCceECCCCcchHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHHHH----cCCeEEEEeCCccCCCccccCCCEEE
Confidence 577878776 67777788988889999999999999999999999999 99999999999999988765 57999
Q ss_pred EEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHH-hCCCccCCCCCCCceeecccccCCccCCCcccccCccccEEE
Q 008291 164 INMESLQGPKMQVYAENSFYVDVSGGELWINILHESV-KYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQ 242 (571)
Q Consensus 164 Idl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~-~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~ 242 (571)
|||++||+ +++|.+. .+|+||||++|.+|+++|. ++|++.+...+ ..++|||.++++|+|..+.+||.++|+|++
T Consensus 83 Idl~~l~~--i~vd~~~-~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~-~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 83 LDLHNLHA--IGPAADG-AGVRVGSGATVDQVQKALFRRWNAALPLGAC-SAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EECTTCCC--EEECTTS-SSEEEETTCBHHHHHHHHHHHHSBCCCCCSB-TTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEecccCC--eEEcCCC-CEEEEECCcCHHHHHHHHHhhcCeEeCCCCC-CCceEeeccccCCCcccccccccHHHhEEE
Confidence 99999998 5788877 8999999999999999997 57997555443 567899999999999999999999999999
Q ss_pred EEEEe--cCCe--EEEc---CCCCCCchhHhhhcC-CCCceEEEEEEEee----------eecCC-ceEEEEEEeCC---
Q 008291 243 LEVVT--GKGE--IINC---SEKQNSELFHSVLGG-LGQFGIITRARISL----------EPAPD-MVKWIRVLYSD--- 300 (571)
Q Consensus 243 levV~--~~G~--i~~~---~~~~~~dL~~~~~Gs-~G~~GIIt~~tl~l----------~p~p~-~~~~~~~~~~~--- 300 (571)
+|||+ +||+ ++++ ++.+|+||||+++|| +|+|||||+++||+ .|.++ .+....+.|+.
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 6777 345689999999998 79999999999999 66544 34444555642
Q ss_pred -HHHHHHHHHHHHhc-C--Ccccccc-ceEEeccccccccccccCCCCCccccccCCCCCCeEEEEEEeeecCCCChHHH
Q 008291 301 -FATFARDQEYLISA-E--KTFDYIE-GFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLV 375 (571)
Q Consensus 301 -~~~~~~~~~~l~~~-~--~~~e~vd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~ 375 (571)
.+.+.+.+..+.+. + ...+-.+ +....-. +.+ ...+.+. +.. . |.+ +.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----------~~~----------~~~~~~~-~~~-~-~~g-~~~~~ 294 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFF----------VNH----------VSSGVLQ-LMV-Q-QDA-DVDPE 294 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEE----------EEC----------GGGCEEE-EEE-E-EET-TTCTT
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEE----------ecC----------CCCCeEE-EEE-E-EeC-ChHHH
Confidence 22333333333221 0 1111111 1110000 000 0011121 111 1 232 22334
Q ss_pred HHHHHHHHhhcccC---CCeeeeccchhhhhhhhhhhhHHHHHh-cccccCCccceecccCcccHHHHHHHHHHhhhcc-
Q 008291 376 NQEVESSLSVLNYI---PSTLFLSEVSYIEFLDRVHVSEVKLRS-KGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAE- 450 (571)
Q Consensus 376 ~~~l~~ll~~l~~~---~~~~~~~dv~y~~~l~~~~~~~~~~~~-~~~W~~r~~~~d~~vP~s~i~~f~~~v~~~il~~- 450 (571)
++.++++++.+... .........+|.+.......... ... ..-+..+...+...+|.+.+..+.+.+ ...
T Consensus 295 ~~~l~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~----~~~~ 369 (501)
T 3pop_A 295 GEILARFVASLTEGTGVVGIPRGGVMSWLTGTRYMSQADC-GDVMGARSASKSAYHRAAPTDEQLSVLHRHL----HADH 369 (501)
T ss_dssp CHHHHHHHHHHHTTSSCCCEEEEEEEEHHHHHHHTCBCSC-GGGTTCEEEEEEEEESSCCCHHHHHHHHHHH----TSSS
T ss_pred HHHHHHHHHhhhhccCCCccceeEEeCHHHHHhhhcCCCC-CcccccccceecccccCCCCHHHHHHHHHHH----HhcC
Confidence 45566666654221 11111233444432221100000 000 000100111222235555565555533 221
Q ss_pred cC-CccEEEecCCCC-CCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc-CC-------Cc
Q 008291 451 TS-NGPILIYPLNKS-KWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETA-RL-------GV 520 (571)
Q Consensus 451 ~~-~g~i~~~p~~~~-~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~-G~-------~~ 520 (571)
.. ...+.+.+..+. .......+.+|+++..+.+.....+.. ++..++..++.+++.+..... |. ..
T Consensus 370 ~~~~~~~~~~~~GGav~~v~~~~TAf~hR~~~~~~~~~~~w~~----~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~ 445 (501)
T 3pop_A 370 PGQASYVMFNSYGGEINRRGPSDAAVPQRDSVVKSSWFSAWQD----AELDELHLGWLRGLYEEFFAGTGGVPVTGGRTD 445 (501)
T ss_dssp CCTTEEEEEEECCGGGGGSCTTTSSCCCCSCSEEEEEEEEESC----GGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBC
T ss_pred CCCceEEEEEecCcccccCCCCCCCccCcCccEEEEEEEEeCC----cchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Confidence 11 234556665432 122334567788887666665555422 223344556666666554322 11 22
Q ss_pred eeccCCCCCH---HH-------HH-HhhchhHHHHHHhhhcCCCCCCCCCCCccc
Q 008291 521 KQYLPHYTTQ---EQ-------WR-SHFGPQWEVFVQRKSTYDPLAILAPGQRIF 564 (571)
Q Consensus 521 ~~Yl~~~~~~---~~-------w~-~~yG~~~~~l~~lK~~yDP~~ifnPG~~If 564 (571)
..|+||-... ++ |. .+||.+|+||+++|++|||+|+|+..|.|.
T Consensus 446 gaYvNy~d~dl~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~ 500 (501)
T 3pop_A 446 GCYINYPDADLLDPARNRSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIG 500 (501)
T ss_dssp CCCTTSCCGGGGCTTTCCSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCC
T ss_pred ceeccCCCccccccccccccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCC
Confidence 3799984321 22 74 668999999999999999999999999884
No 15
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=4.8e-41 Score=367.44 Aligned_cols=199 Identities=23% Similarity=0.318 Sum_probs=173.7
Q ss_pred eeecc---hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC--CCcEEEEc
Q 008291 92 HLNFD---EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA--HQGVVINM 166 (571)
Q Consensus 92 ~v~~~---~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~--~~givIdl 166 (571)
.+.++ .+....+.|+..+...|.+|++|+|++||+++|++|++ +++||++||||||+.+.+.+ .+|++|||
T Consensus 19 ~~~~~~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~----~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl 94 (503)
T 1zr6_A 19 EFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLD----AGVQISAKGGGHSYGSYGFGGEDGHLMLEL 94 (503)
T ss_dssp EECCTTSHHHHHHTSCSBGGGCCCCSEEEECCSHHHHHHHHHHHHH----HTCCEEEESSCCCTTCTTTTSSSSCEEEEC
T ss_pred eecCCCccchHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHH----cCCeEEEECCCcCCCCCcccCCCCcEEEEC
Confidence 44444 45555677887788999999999999999999999999 99999999999999986553 57999999
Q ss_pred CCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCC-CccCCCCCCCceeecccccCCccCCCcccccCccccEEEEEE
Q 008291 167 ESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYG-LAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEV 245 (571)
Q Consensus 167 ~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~G-l~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~lev 245 (571)
++||+| ++| ++ .+|+||||++|.+|+++|.++| ++.+.+.+ ..++|||.+.++|+|..+.+||.++|+|+++||
T Consensus 95 ~~l~~i--~~d-~~-~~v~v~aG~~~~~l~~~l~~~~gl~~~~G~~-~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~v 169 (503)
T 1zr6_A 95 DRMYRV--SVD-DN-NVATIQGGARLGYTALELLDQGNRALSHGTC-PAVGVGGHVLGGGYGFATHTHGLTLDWLIGATV 169 (503)
T ss_dssp TTCCCE--EEC-TT-SCEEEETTCBHHHHHHHHHHTTSEECCCCSC-TTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEE
T ss_pred ccCCCE--EEC-CC-CeEEEecCCCHHHHHHHHHHcCCEEeCCCCC-CcCchhhhhcCCCCCcccccccChhheEEEEEE
Confidence 999994 777 55 7999999999999999997664 76554333 567899999999999999999999999999999
Q ss_pred EecCCeEEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeC
Q 008291 246 VTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYS 299 (571)
Q Consensus 246 V~~~G~i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~ 299 (571)
|++||+++++++.+|+||||+++||+|+|||||+++||++|.|+...++.+.|.
T Consensus 170 V~a~G~i~~~~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~ 223 (503)
T 1zr6_A 170 VLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTT 223 (503)
T ss_dssp ECTTSCEEEEBTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEEC
T ss_pred EecCCCEEEeCCCCCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEe
Confidence 999999999999899999999999999999999999999999987666665553
No 16
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=6.6e-40 Score=359.92 Aligned_cols=435 Identities=13% Similarity=0.142 Sum_probs=266.4
Q ss_pred CCCeeecc---hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-CCcEEE
Q 008291 89 LDGHLNFD---EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA-HQGVVI 164 (571)
Q Consensus 89 ~~g~v~~~---~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~-~~givI 164 (571)
-...+.++ .+....+.|+.++...|.+|++|+|++||+++|++|++ +++||++|||||++.|.+.. .+|++|
T Consensus 32 ~~~~v~~p~~~~Y~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~----~~~~v~v~ggGh~~~g~~~~~~~gvvI 107 (530)
T 2y3s_A 32 KHIDSVAPGDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVR----SGKRVAVRSGGHCYEDFVANSDVRVVM 107 (530)
T ss_dssp --CCEECTTSTTHHHHTCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHH----TTCCEEEESSCCCSSSTTTCTTCCEEE
T ss_pred CCceEECCCCccHHHHHhHhhhhccCCCCEEEecCCHHHHHHHHHHHHH----cCCcEEEECCCCCCCCCcccCCCeEEE
Confidence 34455655 57777788887788999999999999999999999999 99999999999999987654 579999
Q ss_pred EcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHh-CCCccCCCCCCCceeecccccCCccCCCcccccCccccEEEE
Q 008291 165 NMESLQGPKMQVYAENSFYVDVSGGELWINILHESVK-YGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQL 243 (571)
Q Consensus 165 dl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~-~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~l 243 (571)
||++||+ |++|++. .+|+||||++|.+|+++|.+ +|+..+. +....++|||.++++|+|..+.+||.++|+|+++
T Consensus 108 dl~~l~~--i~~d~~~-~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 108 DMSRLSA--VGFDEER-GAFAVEAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp ECTTCCC--EEEETTT-TEEEEETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EcccCCC--EEEcCCC-CEEEEeCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 9999998 5788877 89999999999999999985 9997554 3445788999999999999999999999999999
Q ss_pred EEEe--cCCeEE--EcCCC-CCCc--hhHhhhcC-CCCceEEEEEEEee------------eecCC-ceEEEEEEeCC--
Q 008291 244 EVVT--GKGEII--NCSEK-QNSE--LFHSVLGG-LGQFGIITRARISL------------EPAPD-MVKWIRVLYSD-- 300 (571)
Q Consensus 244 evV~--~~G~i~--~~~~~-~~~d--L~~~~~Gs-~G~~GIIt~~tl~l------------~p~p~-~~~~~~~~~~~-- 300 (571)
|||+ ++|+++ +++++ +|+| |||+++|+ +|+|||||+++||+ +|.|+ .+....+.|+.
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 9999 559984 45664 5665 99999986 69999999999999 99876 34444555532
Q ss_pred --HHHHHHHHHHHHhc---CCcccccc--ceEEeccccccccccccCCCCCccccccCCCCCCeEEEEEEeeecCCCChH
Q 008291 301 --FATFARDQEYLISA---EKTFDYIE--GFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKD 373 (571)
Q Consensus 301 --~~~~~~~~~~l~~~---~~~~e~vd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~ 373 (571)
.+.+.+.+..+.+. ....+-.+ -+.+.. +.. .....+.+ .. . |.+. .+
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~-----------~~~----------~~~~~~~~-~~-~-~~g~-~~ 318 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLA-----------LTR----------SQSGALAM-TT-Q-LDAT-GP 318 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEE-----------EEC----------GGGSEEEE-EE-E-EECC-ST
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEE-----------ecc----------CCCCcEEE-EE-E-EeCC-HH
Confidence 22333333332221 00011000 000000 000 00111211 11 1 3332 23
Q ss_pred HHHHHHHHHHhhcccCCC---eeeeccchhhhhhhhhhhhHHHHHhcccccCCccceec----ccCcccHHHHHHHHHHh
Q 008291 374 LVNQEVESSLSVLNYIPS---TLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNL----FIPQSKIHDFAREVFGN 446 (571)
Q Consensus 374 ~~~~~l~~ll~~l~~~~~---~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r~~~~d~----~vP~s~i~~f~~~v~~~ 446 (571)
+.++.++++++.+....+ .......+|.+..... ... ..+....|..+-.. .++.+.+.++.+.+. .
T Consensus 319 ~~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~-~ 392 (530)
T 2y3s_A 319 DAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWP---GIA--GDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLT-S 392 (530)
T ss_dssp THHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCH---HHH--CCCCCCSEEEEEEEEESSCCCHHHHHHHHHHHH-C
T ss_pred HHHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhh---cCC--CCCcccccceeeccccccCCCHHHHHHHHHHHH-h
Confidence 345566666665433211 1112223444322111 000 01100001111112 233344444444321 1
Q ss_pred hhcccCCccEEEecCCCC-CCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc--CC-----
Q 008291 447 ILAETSNGPILIYPLNKS-KWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETA--RL----- 518 (571)
Q Consensus 447 il~~~~~g~i~~~p~~~~-~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~--G~----- 518 (571)
--.......+.+.+..+. .......+.+|+++..+.+.....+... ...+...++.+++.+..... |.
T Consensus 393 ~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~~~~~~~~~~~w~~~----~~~~~~~~w~~~~~~~l~~~~~g~p~~~~ 468 (530)
T 2y3s_A 393 TDYDNPAGVVALIAYGGKVNAVPADRTAVAQRDSILKIVYVTTWEDP----AQDPVHVRWIRELYRDVYADTGGVPVPGG 468 (530)
T ss_dssp SSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCSCSEEEEEEEEECCT----TCHHHHHHHHHHHHHHHTGGGTTSCCTTT
T ss_pred cCCCCCceEEEEEecCCccccCCCCcCcccccccceeEEEEEecCCC----cchHHHHHHHHHHHHHHHhhhcCCCcccC
Confidence 000111133445554331 1112234567777765555554444221 12334445555555544311 11
Q ss_pred -CceeccCCCCCH-H---------HHH-HhhchhHHHHHHhhhcCCCCCCCCCCCcccCC
Q 008291 519 -GVKQYLPHYTTQ-E---------QWR-SHFGPQWEVFVQRKSTYDPLAILAPGQRIFQK 566 (571)
Q Consensus 519 -~~~~Yl~~~~~~-~---------~w~-~~yG~~~~~l~~lK~~yDP~~ifnPG~~If~~ 566 (571)
....|+||-... . +|. .+||.+|+||+++|++|||.|+|.-.|.|.++
T Consensus 469 ~~~g~Y~Ny~d~~~~~~~~~~s~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 469 AADGAYVNYPDVDLADEEWNTSGVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp TBCCCCTTSCCGGGGCTTTCCSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CCCceEeCCcCccccccccccchhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 122799984332 1 275 67899999999999999999999999999654
No 17
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1e-39 Score=358.24 Aligned_cols=433 Identities=13% Similarity=0.148 Sum_probs=265.5
Q ss_pred CCeeecc---hhhhHh-hhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-CCcEEE
Q 008291 90 DGHLNFD---EVHNAA-RDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA-HQGVVI 164 (571)
Q Consensus 90 ~g~v~~~---~~~~~~-~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~-~~givI 164 (571)
...+.++ .|.... +.|+.++...|.+||+|+|++||+++|++|++ +++||++|||||++.|.+.. .+||+|
T Consensus 29 ~~~v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~----~~~~~~vrggGh~~~g~~~~~~~gvvI 104 (521)
T 2ipi_A 29 ALVKVDRVDRRYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQAMA----AGQRIAVRSGGHCFEGFVDDPAVRAVI 104 (521)
T ss_dssp CCCEEESSSTTHHHHHTCCSCTTCCCCCSEEEECSSHHHHHHHHHHHHH----HTCCEEEESSCCCTTCGGGCTTCCEEE
T ss_pred CCeEECCCCcchHHHHhccccccccCCCCEEEEcCCHHHHHHHHHHHHH----cCCeEEEECCCcCCCCCcccCCCeEEE
Confidence 3455555 566666 88888888999999999999999999999999 99999999999999987653 589999
Q ss_pred EcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHH-hCCCccCCCCCCCceeecccccCCccCCCcccccCccccEEEE
Q 008291 165 NMESLQGPKMQVYAENSFYVDVSGGELWINILHESV-KYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQL 243 (571)
Q Consensus 165 dl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~-~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~l 243 (571)
||++||+ +++|++. .+|+||||++|.+|+++|. ++|++.+...+ ..++|||.+.++|+|..+.+||.++|+|+++
T Consensus 105 dl~~l~~--i~~d~~~-~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~-~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 180 (521)
T 2ipi_A 105 DMSQMRQ--VFYDSGK-RAFAVEPGATLGETYRALYLDWGVTIPAGVC-PQVGVGGHVLGGGYGPLSRRDGVVADHLYAV 180 (521)
T ss_dssp ECTTCCC--EEEETTT-TEEEECTTSBHHHHHHHHHHHHSBCCCCCSC-TTCBHHHHTTTTCCCTTHHHHCCGGGGEEEE
T ss_pred ecccCCC--eEEeCCC-CEEEEeCCcCHHHHHHHHHHhcCceeCCCCC-CCcccCCcccCCCCCccccccccHhhcEEEE
Confidence 9999998 5888777 8999999999999999997 79997655444 4689999999999999999999999999999
Q ss_pred EEEecC--CeEE--EcCCC-CCCc--hhHhhhcC-CCCceEEEEEEEee-----------eecCCc-eEEEEEEeC--CH
Q 008291 244 EVVTGK--GEII--NCSEK-QNSE--LFHSVLGG-LGQFGIITRARISL-----------EPAPDM-VKWIRVLYS--DF 301 (571)
Q Consensus 244 evV~~~--G~i~--~~~~~-~~~d--L~~~~~Gs-~G~~GIIt~~tl~l-----------~p~p~~-~~~~~~~~~--~~ 301 (571)
|||++| |+++ ++++. +++| |||+++|| +|+|||||+++||+ +|.|+. +....+.|+ +.
T Consensus 181 evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 260 (521)
T 2ipi_A 181 EVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSAL 260 (521)
T ss_dssp EEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTC
T ss_pred EEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEeccccc
Confidence 999977 9874 44543 5565 99999985 69999999999999 998764 344445553 22
Q ss_pred --HHHHHHHHHHHhc---CCcccccc-ceEEeccccccccccccCCCCCccccccCCCCCCeEEEEEEeeecCCCChHHH
Q 008291 302 --ATFARDQEYLISA---EKTFDYIE-GFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLV 375 (571)
Q Consensus 302 --~~~~~~~~~l~~~---~~~~e~vd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~ 375 (571)
+.+.+.+..+.+. ....+-.. +.... +. +. +...+.+.++ . . |.+.. ++.
T Consensus 261 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~--------~~--~~----------~~~~~~~~~~-~-~-~~g~~-~~~ 316 (521)
T 2ipi_A 261 TEEAFTRIIDNHGAWHQSNSAAGTPYASMHSV--------FY--LN----------SRAAGQILLD-I-Q-IDGGL-DGA 316 (521)
T ss_dssp CHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEE--------EE--EE----------CTTSCEEEEE-E-E-EETTS-TTH
T ss_pred CHHHHHHHHHHHHHHHHhccCCCccccceEEE--------EE--ec----------cCCCCceEEE-E-E-eccCH-HHH
Confidence 2333333333221 00001000 00000 00 00 0011122221 1 1 33332 335
Q ss_pred HHHHHHHHhhcccCCC--e-eeeccchhhhhhhhhhhhHHHHHh-cccccCCccceecccCcccHHHHHHHHHHhhhccc
Q 008291 376 NQEVESSLSVLNYIPS--T-LFLSEVSYIEFLDRVHVSEVKLRS-KGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAET 451 (571)
Q Consensus 376 ~~~l~~ll~~l~~~~~--~-~~~~dv~y~~~l~~~~~~~~~~~~-~~~W~~r~~~~d~~vP~s~i~~f~~~v~~~il~~~ 451 (571)
++.++++++.+...-+ . ......+|.+....... . ... ...+ .+..+....++.+.+.++.+.+ ....
T Consensus 317 ~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~-~~s~~~~~~~~~~~i~~~~~~~----~~~~ 388 (521)
T 2ipi_A 317 EALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKF--D-TGGFDRTK-SKGAYLRKPWTAAQAATLYRHL----SADS 388 (521)
T ss_dssp HHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCC--C-CTTCCEEE-EEEEEESSCCCHHHHHHHHHHH----HSCC
T ss_pred HHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcC--C-CCCCccce-eeccccccCCCHHHHHHHHHHH----HhCC
Confidence 5566676665533211 1 11122333332111000 0 000 0000 0001111123444454444433 2111
Q ss_pred CC-ccEEEecCCCC-CCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc--CC------Cce
Q 008291 452 SN-GPILIYPLNKS-KWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETA--RL------GVK 521 (571)
Q Consensus 452 ~~-g~i~~~p~~~~-~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~--G~------~~~ 521 (571)
.. ..+.+.+..+. .......+.+|+++..+.+.....+.. +...+...++.+++.+..... |. ...
T Consensus 389 ~~~~~~~~~~~GG~v~~~~~~~ta~~~R~~~~~~~~~~~w~~----~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g 464 (521)
T 2ipi_A 389 QVWGEVSLYSYGGKVNSVPETATATAQRDSIIKVWMSATWMD----PAHDDANLAWIREIYREIFATTGGVPVPDDRTEG 464 (521)
T ss_dssp SSEEEEEEEECCGGGGGSCTTTSSCCCCSCSEEEEEEEEESC----GGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCC
T ss_pred CCceEEEEEecCCcccCCCCccccccccchhhhcceeEecCC----CCchHHHHHHHHHHHHHHHhhhcCCCcccCCCCc
Confidence 12 33444444331 111223456677776555544433321 122344455556655554311 11 123
Q ss_pred eccCCCCCH-H---------HH-HHhhchhHHHHHHhhhcCCCCCCCCCCCcccCC
Q 008291 522 QYLPHYTTQ-E---------QW-RSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQK 566 (571)
Q Consensus 522 ~Yl~~~~~~-~---------~w-~~~yG~~~~~l~~lK~~yDP~~ifnPG~~If~~ 566 (571)
.|+||-... . +| ..+||.+++||+++|++|||.|+|.-.|.|.++
T Consensus 465 ~Y~Ny~d~~~~~~~~~~~~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 465 TFINYPDVDLVDERWNTSGVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp CCTTSCCGGGGCTTTSCCSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred eEeCCCCccccccccccchhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 799984332 1 27 467889999999999999999999999998653
No 18
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=3.5e-39 Score=353.84 Aligned_cols=203 Identities=18% Similarity=0.240 Sum_probs=173.6
Q ss_pred CCCeeecc---hhhhHh-hhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-CCcEE
Q 008291 89 LDGHLNFD---EVHNAA-RDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA-HQGVV 163 (571)
Q Consensus 89 ~~g~v~~~---~~~~~~-~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~-~~giv 163 (571)
..+.+.++ .|.... +.|+.++...|.+|++|+|++||+++|++|++ +++||++|||||++.|.+.. .+||+
T Consensus 30 ~~~~v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~----~~~~~~v~ggGh~~~g~~~~~~~gvv 105 (523)
T 2wdx_A 30 AGPVKVTPDDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEETVR----TGKRVAVRSGGHCFEDFVDNPDVKVI 105 (523)
T ss_dssp CCCEEECTTSTTHHHHHTCSSCTTCCCCCSEEEECSSHHHHHHHHHHHHH----HTCCEEEESSCCCSSSSSSSTTCCEE
T ss_pred CCCeEECCCCcchHHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHH----cCCcEEEEcCCCCCCCCccCCCCeEE
Confidence 44666765 566666 78887788999999999999999999999999 99999999999999988765 57999
Q ss_pred EEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHH-hCCCccCCCCCCCceeecccccCCccCCCcccccCccccEEE
Q 008291 164 INMESLQGPKMQVYAENSFYVDVSGGELWINILHESV-KYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQ 242 (571)
Q Consensus 164 Idl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~-~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~ 242 (571)
|||++||+ |++|++. .+|+||||++|.+|+++|. ++|+..+. +.+..++|||.++++|+|..+.+||.++|+|++
T Consensus 106 Idl~~m~~--i~~d~~~-~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~ 181 (523)
T 2wdx_A 106 IDMSLLTE--IAYDPSM-NAFLIEPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYA 181 (523)
T ss_dssp EECTTCCC--EEEETTT-TEEEECTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEE
T ss_pred EEcccCCC--EEEcCCC-CEEEEcCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccccccChhheEEE
Confidence 99999999 5888777 8999999999999999998 59997555 344578999999999999999999999999999
Q ss_pred EEEEecC--CeEEEc--CCC-CCCc--hhHhhhcC-CCCceEEEEEEEee-----------eecCCc-eEEEEEEeC
Q 008291 243 LEVVTGK--GEIINC--SEK-QNSE--LFHSVLGG-LGQFGIITRARISL-----------EPAPDM-VKWIRVLYS 299 (571)
Q Consensus 243 levV~~~--G~i~~~--~~~-~~~d--L~~~~~Gs-~G~~GIIt~~tl~l-----------~p~p~~-~~~~~~~~~ 299 (571)
+|||++| |+++++ ++. +|+| |||+++|+ +|+|||||+++||+ +|.|+. +....+.|+
T Consensus 182 ~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 182 VEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp EEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred EEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 9999955 997543 654 5666 99999975 69999999999999 998864 455566674
No 19
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=3.2e-37 Score=334.37 Aligned_cols=206 Identities=23% Similarity=0.303 Sum_probs=183.4
Q ss_pred hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCC--CcEEEEEcCCCCCCCCCcCCCcEEEEcCCCCCCeE
Q 008291 97 EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHS--ELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKM 174 (571)
Q Consensus 97 ~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~--~~~v~~rg~G~s~~g~~~~~~givIdl~~l~~i~i 174 (571)
....+.++|++ +.+.|.+|++|+|++||+++|++|++ + ++||+++|+|||+.+.+...+|++|||++||+| +
T Consensus 28 ~~~~~~~~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~----~~~~~~v~~~G~G~s~~~~~~~~~gvvIdl~~l~~i-~ 101 (481)
T 4feh_A 28 TTATRLTGWGR-TAPSVANVLRTPDAEMIVKAVARVAE----SGGGRGAIARGLGRSYGDNAQNGGGLVIDMTPLNTI-H 101 (481)
T ss_dssp EEEEEECCTTC-CSCEEEEEEECSCHHHHHHHHHHHHT----TTCTTCEEEECSSCSSSSTTCCTTSEEEECTTCCCE-E
T ss_pred CccceeecccC-CCCCCCEEEeCCCHHHHHHHHHHHHH----cCCCceEEEEeCCcCCCCCCCCcCeEEEECccCCCc-e
Confidence 33456779976 69999999999999999999999999 8 799999999999988776568999999999997 7
Q ss_pred EEeCCcceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEE
Q 008291 175 QVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIIN 254 (571)
Q Consensus 175 ~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~ 254 (571)
++|+++ .+|+||||++|.+|.++|.++|++++..++...+||||+++++++|..+.+||.+.|+|+++++|++||++++
T Consensus 102 ~~d~~~-~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~ 180 (481)
T 4feh_A 102 SIDADT-KLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRH 180 (481)
T ss_dssp EEETTT-TEEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEE
T ss_pred EEcCCC-CEEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEE
Confidence 999887 8999999999999999999999986666666788999999998878888999999999999999999999999
Q ss_pred cCCC-CCCchhHhhhcCCCCceEEEEEEEeeeecCCce-EEEEEEeCCHHHHHHHHH
Q 008291 255 CSEK-QNSELFHSVLGGLGQFGIITRARISLEPAPDMV-KWIRVLYSDFATFARDQE 309 (571)
Q Consensus 255 ~~~~-~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~-~~~~~~~~~~~~~~~~~~ 309 (571)
|++. +|+||||+++||+|++||||+++|++.|.|+.. ......+.+++++.+..+
T Consensus 181 ~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~ 237 (481)
T 4feh_A 181 LTPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHS 237 (481)
T ss_dssp ECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHS
T ss_pred eCCCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHH
Confidence 9998 899999999999999999999999999998653 334566788877766654
No 20
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=6.2e-38 Score=336.30 Aligned_cols=394 Identities=16% Similarity=0.186 Sum_probs=257.7
Q ss_pred hhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-CCcEEEEcCCCCCCeEEEeCCc
Q 008291 102 ARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA-HQGVVINMESLQGPKMQVYAEN 180 (571)
Q Consensus 102 ~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~-~~givIdl~~l~~i~i~i~~~~ 180 (571)
.++|++.+...|.+|++|+|++||+++|+.| +|+++||+|||+.+++.+ .+|++|||++||+| +++|+++
T Consensus 10 ~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a--------~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i-~~~d~~~ 80 (422)
T 2vfr_A 10 VTNWAGNITYTAKELLRPHSLDALRALVADS--------ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSV-VDVDTAA 80 (422)
T ss_dssp CBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC--------SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCC-EEEETTT
T ss_pred eecCCCCccCCCCEEEeCCCHHHHHHHHHhC--------CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCc-EEEcCCC
Confidence 4689888999999999999999999999986 579999999999988773 58999999999998 7899877
Q ss_pred ceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEEcCCCCC
Q 008291 181 SFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQN 260 (571)
Q Consensus 181 ~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~~~~~~~ 260 (571)
.+|+||||++|.+|.++|.++|+.++..++.+.+||||+++++++|.. .+||.++|+|+++++|++||+++++++++|
T Consensus 81 -~~v~v~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~ 158 (422)
T 2vfr_A 81 -RTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDE 158 (422)
T ss_dssp -TEEEEETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTST
T ss_pred -CEEEEcCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCC
Confidence 899999999999999999999998777777778899999999887755 799999999999999999999999998877
Q ss_pred CchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHH-HHHHHHHhcCCccccccceEEecccccccccccc
Q 008291 261 SELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFA-RDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSS 339 (571)
Q Consensus 261 ~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~e~vd~~~~~~~~~~~~~~~~~ 339 (571)
+ ||+++||+|++||||+++||+.|.|+....... +.+++++. ++...+...+..+|+++ ... +... ...|+..
T Consensus 159 ~--f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~-~~~~-~~~~~~~ 232 (422)
T 2vfr_A 159 R--FGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVMAAAYSVSLFT-DWR-APGF-RQVWLKR 232 (422)
T ss_dssp T--GGGTSSCTTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHHTSSSEEEEEE-CSS-SSSE-EEEEEEE
T ss_pred C--cceEEecCCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHHhcCCcEEEEe-cCC-Ccee-EEEEecC
Confidence 6 899999999999999999999999987655543 67888888 87777764334445443 111 0000 0011100
Q ss_pred CCCCCccccccCCCCCCeEEEEEEeeecCCCChHHHHHHHHHHHhhcccCCCe---eeeccchhhhhhhhhhhhHHHHHh
Q 008291 340 FDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPST---LFLSEVSYIEFLDRVHVSEVKLRS 416 (571)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~---~~~~dv~y~~~l~~~~~~~~~~~~ 416 (571)
... .+...+.+ .+.. .. ..+..+.. .+.....+.....++.. ..
T Consensus 233 ~~~--------~~~~~~~~--~~~~---~~---------------~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~ 279 (422)
T 2vfr_A 233 RTD--------RPLDGFPY--AAPA---AE---------------KMHPVPGMPAVNCTEQFGVPGPWHERLP-----HF 279 (422)
T ss_dssp ETT--------SCCCCCTT--SEEC---SS---------------CCCSSTTSCGGGBCCCTTCCEEGGGTSS-----SB
T ss_pred cCC--------CCCCCchH--HHHH---Hh---------------hcccCcccChhhhcccCCccccHHHhcc-----cc
Confidence 000 00000000 0100 00 00000000 00000000000000000 00
Q ss_pred ccccc---CCccceecccCcccHHHHHHHHHHhhhcccCC--ccEEE-ecCCCCCCCCCCCccCCCcceEEeeeecCCCC
Q 008291 417 KGLWE---VPHPWLNLFIPQSKIHDFAREVFGNILAETSN--GPILI-YPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAV 490 (571)
Q Consensus 417 ~~~W~---~r~~~~d~~vP~s~i~~f~~~v~~~il~~~~~--g~i~~-~p~~~~~~~~~~~~~~p~~~~~~~v~~l~~~~ 490 (571)
..-|+ .+....|++||.++++++++++. +++..+.. .++.+ +......|. +... .++.. .+.+...
T Consensus 280 ~~~~~p~~~~~~~~e~avP~e~~~~~l~~l~-~~~~~~~~~~~~v~~r~~~~~~~~L---s~~~-~r~~~-~l~~~~~-- 351 (422)
T 2vfr_A 280 RAEFTPSSGAELQSEYLMPREHALAALHAMD-AIRETLAPVLQTCEIRTVAADAQWL---SPAY-GRDTV-AAHFTWV-- 351 (422)
T ss_dssp CTTCCCSCCSCEEEEEEEEGGGHHHHHHHHH-HTHHHHGGGEEEEEEEEECCBCSTT---CTTB-TSCEE-EEEEEEC--
T ss_pred cccccCCcccEEEEEEEEEHHHHHHHHHHHH-HHHHhCCCceeeEEEEeecCCcccc---CCCC-CCCeE-EEEEecC--
Confidence 11122 11223499999999999999974 55433111 23333 222111111 1111 13322 2222211
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHcCCCceeccCCCCCHHHHHHhhchhHHHHHHhhhcCCCCCCCCCC
Q 008291 491 PSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPG 560 (571)
Q Consensus 491 ~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~~~Yl~~~~~~~~w~~~yG~~~~~l~~lK~~yDP~~ifnPG 560 (571)
+..+.+.+..+++.+...+.|...+.+=.++.+.+++.+.|+ +|+.|+++|++|||+++|+.-
T Consensus 352 ------~~~~~~~~~~~~~~~lv~~~gG~~~wgk~~~~~~~~~~~~Yp-~~~~f~~vk~~~DP~g~f~n~ 414 (422)
T 2vfr_A 352 ------EDTAAVLPVVRRLEEALVPFAARPHWGKVFTVPAGELRALYP-RLADFGALAGALDPAGKFTNA 414 (422)
T ss_dssp ------SCHHHHHHHHHHHHHHHGGGTCEECTTSCCCCCHHHHHTTCT-THHHHHHHHHHHCTTCTTCCH
T ss_pred ------CCchhHHHHHHHHHHHHHHcCCcccccccCCCCHHHHHHHCc-CHHHHHHHHHHhCCCCccCCH
Confidence 123444455666666665666444312133577889999997 799999999999999999853
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=6.9e-33 Score=300.66 Aligned_cols=198 Identities=16% Similarity=0.177 Sum_probs=163.2
Q ss_pred hhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCC-----CCCcCCCcEEEEcC-CCCC
Q 008291 98 VHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQ-----GQAQAHQGVVINME-SLQG 171 (571)
Q Consensus 98 ~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~-----g~~~~~~givIdl~-~l~~ 171 (571)
+....++|++.+.+.|.+|++|+|++||+++|++|++ +++||+++|+|||+. +.....+||+|||+ +||+
T Consensus 15 y~~~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~----~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~ 90 (540)
T 3js8_A 15 YKQSFKNWAGDIKVDDVWTCAPRSADEVVKVANWAKD----NGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTA 90 (540)
T ss_dssp EEEEEECTTSCCEEEEEEEECCSSHHHHHHHHHHHHH----HTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCC
T ss_pred hcceeeccccccCCCccEEEEcCCHHHHHHHHHHHHH----cCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCC
Confidence 3445678998889999999999999999999999999 999999999999985 33333578999995 6999
Q ss_pred CeEEEeCC--cceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCC----------cccccCcccc
Q 008291 172 PKMQVYAE--NSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQ----------AFQHGPQISN 239 (571)
Q Consensus 172 i~i~i~~~--~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~----------~~~~G~~~d~ 239 (571)
| ++|++ . .+|+||||+++.+|+++|.++|++.+..++.+.+||||+++++++|.. +.+||.++|+
T Consensus 91 I--~vD~~~~~-~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~ 167 (540)
T 3js8_A 91 M--SIDASGPV-AKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNL 167 (540)
T ss_dssp E--EEECSSSS-EEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGG
T ss_pred E--EECCCCCc-cEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHh
Confidence 5 77763 5 799999999999999999999997655555566899999998876664 5799999999
Q ss_pred EEEEEEEecCCe-----EEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHH
Q 008291 240 VHQLEVVTGKGE-----IINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFAR 306 (571)
Q Consensus 240 v~~levV~~~G~-----i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~ 306 (571)
|++++||++||+ ++++++ +++||+ ++++|.|+ ||||++|||++|.+....... ...++++..+
T Consensus 168 V~~levV~adG~~~~~~i~~~s~-~~~DL~-a~r~G~G~-gIVTevtlrl~P~~~l~~~~~-~~~~~~e~l~ 235 (540)
T 3js8_A 168 VLSLTAVVYDKASGAYALRKFAR-NDPQIA-PLLAHVGR-SLIVEATLQAAPNQRLRCQSW-FNIPYGEMFA 235 (540)
T ss_dssp EEEEEEEEEETTTTEEEEEEEET-TSGGGH-HHHTCTTS-SCEEEEEEEEEECCEEEEEEE-CCSCHHHHTC
T ss_pred EEEEEEEcCCCCCceeeEEEeCC-CChhHH-HHHhcCCC-eEEEEEEEEEEECCceEEEEE-ecCCHHHHHh
Confidence 999999999998 888886 689985 55565687 699999999999987643321 1236666654
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=8.6e-33 Score=305.59 Aligned_cols=199 Identities=15% Similarity=0.132 Sum_probs=168.8
Q ss_pred hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcC-----CCcEEEEc-CCCC
Q 008291 97 EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQA-----HQGVVINM-ESLQ 170 (571)
Q Consensus 97 ~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~-----~~givIdl-~~l~ 170 (571)
.+..+.++|++.+...|.+|++|+|++||+++|++|++ +++||+++|+|||+.+.+.. .+|++||| ++||
T Consensus 20 ~y~~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~----~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~ 95 (561)
T 2i0k_A 20 LFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWAHE----HDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLN 95 (561)
T ss_dssp CEEEEEECTTSSSEEEEEEEECCSSHHHHHHHHHHHHH----HTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSC
T ss_pred hHHHHHhhhhhccCCCCCEEEecCCHHHHHHHHHHHHH----CCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCC
Confidence 45556789988889999999999999999999999999 99999999999998654332 36899999 8999
Q ss_pred CCeEEEeC--CcceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCC----------cccccCccc
Q 008291 171 GPKMQVYA--ENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQ----------AFQHGPQIS 238 (571)
Q Consensus 171 ~i~i~i~~--~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~----------~~~~G~~~d 238 (571)
+| ++|+ +. .+|+||||++|.+|.++|.++|+.++..++...+||||+++++++|.. +.+||.++|
T Consensus 96 ~i--~vd~~~~~-~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d 172 (561)
T 2i0k_A 96 GI--TVNTGGPV-ATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSN 172 (561)
T ss_dssp CE--EEECCSSS-CEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGG
T ss_pred ce--EecCcCCc-cEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccccccccccHhh
Confidence 94 7887 66 899999999999999999999998666677777999999998876665 778999999
Q ss_pred cEEEEEEEecCCe---EEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHH
Q 008291 239 NVHQLEVVTGKGE---IINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFAR 306 (571)
Q Consensus 239 ~v~~levV~~~G~---i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~ 306 (571)
+|+++++|++||+ +++++++ |+||+|+++|. |. ||||++||++.|.|+........+ +++++.+
T Consensus 173 ~V~~~evV~~dG~~~~~~~~~~~-~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~~-~~~~~l~ 239 (561)
T 2i0k_A 173 LVTELTAVVWNGTTYALETYQRN-DPRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTDI-PWRELFA 239 (561)
T ss_dssp GEEEEEEEEECSSSEEEEEEETT-SGGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECCS-CHHHHTC
T ss_pred eEEEEEEEeCCCCEEEeeeccCC-CccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEcc-CHHHHHH
Confidence 9999999999999 8888875 78999988844 55 999999999999998765554334 4555444
No 23
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.94 E-value=1.1e-28 Score=254.89 Aligned_cols=181 Identities=18% Similarity=0.229 Sum_probs=148.9
Q ss_pred ccccccCCCeeecc-hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcCCCc
Q 008291 83 SLKTLTLDGHLNFD-EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQG 161 (571)
Q Consensus 83 ~l~~~~~~g~v~~~-~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~~~g 161 (571)
+|.++...+++.++ .+..|+++ .+...|.+|++|+|++||+++|++|++ +++|++++|+|||+.+.+.+.+|
T Consensus 21 ~l~~~l~~~~v~~~~~l~~~~t~---~~~~~p~~vv~P~s~eev~~~l~~a~~----~~~pv~~~GgGtnl~~~~~~~~g 93 (326)
T 1hsk_A 21 ALQQLIPNEKIKVDEPLKRYTYT---KTGGNADFYITPTKNEEVQAVVKYAYQ----NEIPVTYLGNGSNIIIREGGIRG 93 (326)
T ss_dssp HHHHHSCGGGEEEEEEGGGTCTT---SCCCEEEEEECCSSHHHHHHHHHHHHH----TTCCEEEESSCSSEEECTTCEEE
T ss_pred HHHHhcCccceecCcchHHhccC---CcCCcceEEEEcCCHHHHHHHHHHHHH----cCCCEEEECCCCccccCCCCCCe
Confidence 44433233456666 56666543 257789999999999999999999999 99999999999999877655479
Q ss_pred EEEEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCC----ccCCCCCCCceeecccccCCccCCCccccc-Cc
Q 008291 162 VVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGL----APKSWTDYLHLTVGGTLSNAGISGQAFQHG-PQ 236 (571)
Q Consensus 162 ivIdl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl----~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G-~~ 236 (571)
++|||++||+| ++|+ .+|+||||++|.+|.+++.++|+ +....++ ||||++++++.+ || .+
T Consensus 94 vvI~l~~m~~i--~id~---~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg----tvGG~i~~nagg-----yG~~~ 159 (326)
T 1hsk_A 94 IVISLLSLDHI--EVSD---DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPG----SIGGAVYMNAGA-----YGGEV 159 (326)
T ss_dssp EEEECTTCCCE--EEET---TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCS----BHHHHHHHTCEE-----TTEEH
T ss_pred EEEEeCCCCce--EEcC---CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcc----hhhHHHhccccc-----Cchhh
Confidence 99999999995 6664 69999999999999999999999 4444333 899999965433 88 99
Q ss_pred cccEEEEEEEecCCeEEEcCCCCCCchhHhhhc----CCCCceEEEEEEEeeeec-CC
Q 008291 237 ISNVHQLEVVTGKGEIINCSEKQNSELFHSVLG----GLGQFGIITRARISLEPA-PD 289 (571)
Q Consensus 237 ~d~v~~levV~~~G~i~~~~~~~~~dL~~~~~G----s~G~~GIIt~~tl~l~p~-p~ 289 (571)
+|+|+++++|+++|++++++.. |++|++++ ++| ||||+++|++.|. |+
T Consensus 160 ~d~v~~v~vv~~~G~i~~~~~~---~~~~gyr~~~l~s~g--gIIt~~~l~l~p~~p~ 212 (326)
T 1hsk_A 160 KDCIDYALCVNEQGSLIKLTTK---ELELDYRNSIIQKEH--LVVLEAAFTLAPGKMT 212 (326)
T ss_dssp HHHEEEEEEECTTSCEEEEETT---TTTCBTTBCHHHHTT--CEEEEEEEECEECCHH
T ss_pred hhhEEEEEEEeCCCCEEEEChH---HcCCCccccccCCCC--EEEEEEEEEEEcCCHH
Confidence 9999999999999999999875 67777776 345 9999999999998 54
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=1.8e-26 Score=237.06 Aligned_cols=189 Identities=15% Similarity=0.145 Sum_probs=152.0
Q ss_pred ccccccccCCCeeecc-hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcCC
Q 008291 81 PYSLKTLTLDGHLNFD-EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAH 159 (571)
Q Consensus 81 ~~~l~~~~~~g~v~~~-~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~~ 159 (571)
..+|+++.....+.++ .+..|++ | .+.+.|.++++|+|++||+++|++|++ +++|+.++|+|||+.+.+.+.
T Consensus 25 ~~~L~~~lg~~~v~~~~~l~~~tt-~--~igg~p~~vv~P~s~eev~~~v~~a~~----~~~pv~v~GgGsnl~~~~~~~ 97 (322)
T 3tx1_A 25 MNNLQTKFPHIAIKLNEPLSKYTY-T--KTGGAADVFVMPKTIEEAQEVVAYCHQ----NKIPLTILGNGSNLIIKDGGI 97 (322)
T ss_dssp CCCHHHHCTTSEEEEEEEGGGGST-T--SCCCEEEEEEECSSHHHHHHHHHHHHH----TTCCEEEESCCTTEEECTTCE
T ss_pred HHHHHHhcCCcceEcCcchHHhcc-C--CcCceeeEEEEeCCHHHHHHHHHHHHH----cCCcEEEECCccCCCcCCCCC
Confidence 3456555445568777 6666665 3 357899999999999999999999999 999999999999988665545
Q ss_pred CcEEEEcCCCCCCeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCCcccc-cCccc
Q 008291 160 QGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQH-GPQIS 238 (571)
Q Consensus 160 ~givIdl~~l~~i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~-G~~~d 238 (571)
+|++|||++||+| .+++ .+|+|+||++|.+|.+++.++|+.+....+....||||++++++.+ | |.+.|
T Consensus 98 ~gvvI~l~~~~~I--~~d~---~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGg-----yGg~~~d 167 (322)
T 3tx1_A 98 RGVILHLDLLQTI--ERNN---TQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGA-----YGGEISD 167 (322)
T ss_dssp EEEEEECTTCCCE--EEET---TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TTEEHHH
T ss_pred CeEEEECCCCCcE--EECC---CEEEEecCcCHHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccC-----cccchHh
Confidence 7999999999985 5665 6999999999999999999999953222222235999999954422 5 79999
Q ss_pred cEEEEEEEecCCeEEEcCCCCCCchhHhhhcCC-C-CceEEEEEEEeeeecCC
Q 008291 239 NVHQLEVVTGKGEIINCSEKQNSELFHSVLGGL-G-QFGIITRARISLEPAPD 289 (571)
Q Consensus 239 ~v~~levV~~~G~i~~~~~~~~~dL~~~~~Gs~-G-~~GIIt~~tl~l~p~p~ 289 (571)
+|+++++|+++|+++++++. |++|+++++. | ..||||+++|++.|.|+
T Consensus 168 ~v~~vevV~~~G~i~~~~~~---~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 168 VLEAATVLTQTGELKKLKRS---ELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp HEEEEEEECTTSCEEEEEGG---GCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred hEEEEEEEcCCCCEEEechH---HcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 99999999999999999864 8999999875 3 57899999999999974
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=1.5e-24 Score=225.13 Aligned_cols=179 Identities=15% Similarity=0.148 Sum_probs=146.3
Q ss_pred eecc-hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcCCCcEEEEcCCCCC
Q 008291 93 LNFD-EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQG 171 (571)
Q Consensus 93 v~~~-~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~~~givIdl~~l~~ 171 (571)
+..+ .+..+++ | ...+.|.++++|+|++||+++|++|++ +++|+.++|+|||+.+.+. .+|+||+++ |++
T Consensus 13 ~~~~~~L~~~tt-~--~igg~a~~vv~p~s~eel~~~v~~a~~----~~ipv~vlGgGSNll~~d~-~~GvVI~l~-~~~ 83 (357)
T 3i99_A 13 IQLGANLKPYHT-F--GIEQLAAQLVVAESIDDLKALYCSAEW----ASLPKLIIGKGSNMLFTCH-YTGMIVVNR-LNG 83 (357)
T ss_dssp CEEEEESGGGST-T--CCSCEEEEEEEECSHHHHHHHHSSSTT----TTSCEEEESSCTTEEECSC-EEEEEEEEC-CCC
T ss_pred eecCCcchhhcc-C--CCCccceEEEEECCHHHHHHHHHHHHH----cCCCEEEECCCcCcccCCC-CCeEEEEcC-CCc
Confidence 3444 4444443 2 357889999999999999999999999 9999999999999886665 579999998 998
Q ss_pred CeEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCCcccccC-ccccEEEEEEEec-C
Q 008291 172 PKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGP-QISNVHQLEVVTG-K 249 (571)
Q Consensus 172 i~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~-~~d~v~~levV~~-~ 249 (571)
|+++-+.++ .+|+|+||++|.+|.+++.++||......+....||||++..+. ..||. +.|+|+++++|++ +
T Consensus 84 i~v~~~~~~-~~v~v~AG~~~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~Na-----GaYG~e~~d~v~~vevv~~~~ 157 (357)
T 3i99_A 84 IEHQQDDDY-HRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNI-----GAYGVEFKDVCDYVEYLCLET 157 (357)
T ss_dssp EEEEECSSE-EEEEEETTSBHHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTTC-----EETTEEGGGTEEEEEEEETTT
T ss_pred eEEeccCCc-eEEEEeCCCcHHHHHHHHHHcCCcCccccCCCCchhHHHHHhch-----hhhhhhHHhhEeEEEEEECCC
Confidence 633223345 79999999999999999999999744333333459999998443 26886 9999999999998 9
Q ss_pred CeEEEcCCCCCCchhHhhhcCC-----CCceEEEEEEEeeeecCC
Q 008291 250 GEIINCSEKQNSELFHSVLGGL-----GQFGIITRARISLEPAPD 289 (571)
Q Consensus 250 G~i~~~~~~~~~dL~~~~~Gs~-----G~~GIIt~~tl~l~p~p~ 289 (571)
|+++++++. |++|++++|. |++||||+++|+|.|.++
T Consensus 158 G~i~~~~~~---dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 158 GTVKRLTME---ECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TEEEEEETG---GGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CcEEEEeHH---HcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 999999864 8999999874 479999999999999864
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.88 E-value=2.9e-22 Score=207.28 Aligned_cols=165 Identities=15% Similarity=0.149 Sum_probs=138.2
Q ss_pred cCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcCCCcEEEEcCCCCCCeEEEeCCcceEEEEcC
Q 008291 109 YQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSG 188 (571)
Q Consensus 109 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~~~givIdl~~l~~i~i~i~~~~~~~v~v~a 188 (571)
..+.|.++++|+|++||++++++|++ +++|+.++|+|||+.+.+. .+|++|+|+ |+++ ..++.++..+|+|+|
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~----~~~pv~vlGgGSnll~~d~-~~GvVI~l~-~~~i-~~i~~~~~~~v~vgA 83 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATA----EGQPVLILGEGSNVLFLED-YRGTVIINR-IKGI-EIHDEPDAWYLHVGA 83 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHH----TTCCEEEESSCTTEEECSC-EEEEEEEEC-CCCE-EEEECSSEEEEEEET
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHH----cCCCEEEECCCcCCcccCC-CCeEEEEcc-CCCc-EEEecCCCeEEEEec
Confidence 46789999999999999999999999 9999999999999886654 489999996 9886 344433203899999
Q ss_pred CCcHHHHHHHHHhCCCccCCCCCCCceeeccccc-CCccCCCccccc-CccccEEEEEEEec-CCeEEEcCCCCCCchhH
Q 008291 189 GELWINILHESVKYGLAPKSWTDYLHLTVGGTLS-NAGISGQAFQHG-PQISNVHQLEVVTG-KGEIINCSEKQNSELFH 265 (571)
Q Consensus 189 G~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~-~~g~g~~~~~~G-~~~d~v~~levV~~-~G~i~~~~~~~~~dL~~ 265 (571)
|++|.+|.+++.++|+.+....+....||||++. |+| .|| .+.|+|.++++|++ +|++++++.. |++|
T Consensus 84 G~~~~~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~NaG------ayG~ei~d~v~~v~vv~~~~G~v~~~~~~---d~~~ 154 (340)
T 1uxy_A 84 GENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIG------AYGVELQRVCAYVDSVELATGKQVRLTAK---ECRF 154 (340)
T ss_dssp TSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTTCE------ETTEEGGGTEEEEEEEETTTTEEEEEETG---GGTC
T ss_pred CCCHHHHHHHHHHCCCCccccccCCccchhHHHHhccc------cchhhHHhheeEEEEEECCCCcEEEEeHH---Hhcc
Confidence 9999999999999999644433333459999998 444 378 49999999999996 9999999864 8999
Q ss_pred hhhcCC-----CCceEEEEEEEeeeecCC
Q 008291 266 SVLGGL-----GQFGIITRARISLEPAPD 289 (571)
Q Consensus 266 ~~~Gs~-----G~~GIIt~~tl~l~p~p~ 289 (571)
++++|. |++||||+++|++.|.+.
T Consensus 155 gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 155 GYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp BTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 999974 369999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.84 E-value=1.3e-21 Score=195.61 Aligned_cols=152 Identities=18% Similarity=0.142 Sum_probs=127.7
Q ss_pred cCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCCCcCCC-cEEEEcCCCCCCeEEEeCCcceEEEEc
Q 008291 109 YQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQ-GVVINMESLQGPKMQVYAENSFYVDVS 187 (571)
Q Consensus 109 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~~~~~~-givIdl~~l~~i~i~i~~~~~~~v~v~ 187 (571)
+.+.|. +++|+|++||+++| ++|+.++|+|||+.+.+.+.+ |++|+|++|++| +++ . +|+
T Consensus 19 igg~a~-vv~p~s~edv~~~v----------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I--~vd----~--~v~ 79 (268)
T 2gqt_A 19 VGGPAE-LWTVETREELKRAT----------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY--DLK----G--WVG 79 (268)
T ss_dssp CCCEEE-EEEECSHHHHHHHT----------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCB--CTT----S--EEE
T ss_pred cCcceE-EEEeCCHHHHHHHh----------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCc--EEc----C--EEE
Confidence 466788 99999999999999 479999999999988776644 999999999986 343 3 999
Q ss_pred CCCcHHHHHHHHHhCCCccCCCCCCCceeecccccCCccCCCccccc-CccccEEEEEEEecCCeEEEcCCCCCCchhHh
Q 008291 188 GGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHG-PQISNVHQLEVVTGKGEIINCSEKQNSELFHS 266 (571)
Q Consensus 188 aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~~~~~g~g~~~~~~G-~~~d~v~~levV~~~G~i~~~~~~~~~dL~~~ 266 (571)
||++|.+|.+++.++|+.+....+....||||++..++ | .|| .+.|+|+++++| ++|+++++++. |++|+
T Consensus 80 aG~~~~~l~~~~~~~Gl~Gle~~~giPGtvGGav~~Na-G----ayG~e~~d~v~~v~vv-~~G~v~~~~~~---~l~~~ 150 (268)
T 2gqt_A 80 AGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNA-G----TRFGEMADALEAVEVF-HDGAFHVYCPE---ELGFG 150 (268)
T ss_dssp TTSBHHHHHHHHHHTTEESCGGGTTCCCBHHHHHHTTC-E----ETTEEGGGGEEEEEEE-ETTEEEEECGG---GSCCB
T ss_pred CCCCHHHHHHHHHHcCCcCCccccCccchhHHHHHhcc-c----cCchhHHhheeEEEEE-CCCcEEEEchH---Hcccc
Confidence 99999999999999999755444444469999999443 2 588 699999999999 99999999864 89999
Q ss_pred hhcCCCC-ceEEEEEEEeeeecC
Q 008291 267 VLGGLGQ-FGIITRARISLEPAP 288 (571)
Q Consensus 267 ~~Gs~G~-~GIIt~~tl~l~p~p 288 (571)
++++.-. -||||+++|++.|.+
T Consensus 151 YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 151 YRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp TTBCCCSTTCEEEEEEECCEECC
T ss_pred cCCCCcCCCceEEEEEEEEEeCC
Confidence 9998621 149999999999985
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.81 E-value=3.8e-20 Score=179.86 Aligned_cols=120 Identities=20% Similarity=0.224 Sum_probs=103.7
Q ss_pred EEeCCcceEEEEcCCCcHHHHHHHHHhCCCccCCCCC-CCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEE
Q 008291 175 QVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTD-YLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEII 253 (571)
Q Consensus 175 ~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~-~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~ 253 (571)
++|+++ .+|+||||+++.+|++++.++|++.+..++ ... ||||+++++++| .+||.. |+|++++||++||+++
T Consensus 2 ~vd~~~-~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 2 EVHAAD-QYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp EEETTT-TEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred eEcCCC-CEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 678777 899999999999999999999997554444 334 999999987755 899999 9999999999999999
Q ss_pred EcCCC-----CCCchhHhhhcCCCCceEEEEEEEeeeecCCceEEEEEEeCC
Q 008291 254 NCSEK-----QNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSD 300 (571)
Q Consensus 254 ~~~~~-----~~~dL~~~~~Gs~G~~GIIt~~tl~l~p~p~~~~~~~~~~~~ 300 (571)
+++.+ .++||+|+++|++|+|||||+++||++|.|+....+.+.+.+
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~ 127 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGS 127 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSS
T ss_pred EECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCC
Confidence 99864 358999999999999999999999999999887666655543
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.33 E-value=1.6e-06 Score=87.50 Aligned_cols=153 Identities=14% Similarity=0.122 Sum_probs=101.8
Q ss_pred CcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCC---CcCCCcEEEEcCC---CCCCeEEEeCCcceEEEE
Q 008291 113 PSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQ---AQAHQGVVINMES---LQGPKMQVYAENSFYVDV 186 (571)
Q Consensus 113 p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~---~~~~~givIdl~~---l~~i~i~i~~~~~~~v~v 186 (571)
+-.+++|+|.+|+.++++.. +.+..+.||||++... .....+++||+++ |+. ++.++ ..+++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~-------~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~--i~~~~---~~l~i 72 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL-------GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRG--IREEG---STVVI 72 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH-------GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCC--EEEET---TEEEE
T ss_pred cceEECCCCHHHHHHHHHhc-------CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcc--eEecC---CEEEE
Confidence 45689999999999988753 3457889999996532 2224689999985 566 45544 57999
Q ss_pred cCCCcHHHHHHH-HHhCCCc--------cCCCCCCCceeecccccCCccCCCcccccCccccEE----EEEEEecCCeEE
Q 008291 187 SGGELWINILHE-SVKYGLA--------PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVH----QLEVVTGKGEII 253 (571)
Q Consensus 187 ~aG~~~~~l~~~-l~~~Gl~--------~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~----~levV~~~G~i~ 253 (571)
+||+++.+|.+. +.+.++- ..+.+--+..||||++.++. + .+.+...++ .+++..++| ..
T Consensus 73 GA~~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~-~-----~~D~~~~l~Al~A~v~~~~~~G-~r 145 (287)
T 1ffv_C 73 GAMTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGD-P-----GNDHPALSIAVEAHFVLEGPNG-RR 145 (287)
T ss_dssp ETTCBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCC-T-----TCSHHHHHHHTTCEEEEEETTE-EE
T ss_pred ccCCcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCC-C-----cHHHHHHHHHcCcEEEEEcCCc-eE
Confidence 999999999863 4444331 11222122579999999774 2 122222222 688899999 45
Q ss_pred EcCCCCCCchhHhhhcCC-CCceEEEEEEEeeeec
Q 008291 254 NCSEKQNSELFHSVLGGL-GQFGIITRARISLEPA 287 (571)
Q Consensus 254 ~~~~~~~~dL~~~~~Gs~-G~~GIIt~~tl~l~p~ 287 (571)
+.... |+|..++-+. ..-.|||+++|.+.+.
T Consensus 146 ~i~~~---df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 146 TVPAD---GFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEEST---TTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEEHH---HHhcCcccccCCCCCEEEEEEecCCCC
Confidence 55443 7777765422 2235899999987664
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.45 E-value=0.00012 Score=78.46 Aligned_cols=149 Identities=11% Similarity=0.023 Sum_probs=98.8
Q ss_pred cEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCC---CcCCCcEEEEcCC---CCCCeEEEeCCcceEEEEc
Q 008291 114 SAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQ---AQAHQGVVINMES---LQGPKMQVYAENSFYVDVS 187 (571)
Q Consensus 114 ~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~---~~~~~givIdl~~---l~~i~i~i~~~~~~~v~v~ 187 (571)
...++|+|.+|+.++++.. + ...+.+|||++... .....+++||+++ |+. ++.++ ..++++
T Consensus 178 ~~y~~P~sl~ea~~ll~~~-------~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~--I~~~~---~~l~IG 244 (462)
T 2w3s_A 178 APAFLPETSDALADWYLAH-------P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQ--IRETP---DGYGIG 244 (462)
T ss_dssp -CCBCCSSHHHHHHHHHHC-------T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSC--EEEET---TEEEEE
T ss_pred cEEEecCCHHHHHHHHhhC-------C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCc--EEEcC---CEEEEc
Confidence 3468999999998888642 1 35688999997643 2224688999988 566 45554 579999
Q ss_pred CCCcHHHHHHHHHhCCCc--------cCCCCCCCceeecccccCCccCCCcccccCccccEE----EEEEEecCCeEEEc
Q 008291 188 GGELWINILHESVKYGLA--------PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVH----QLEVVTGKGEIINC 255 (571)
Q Consensus 188 aG~~~~~l~~~l~~~Gl~--------~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~----~levV~~~G~i~~~ 255 (571)
||+++.+|.+. .+.++- ..+.+--+..||||+|.++. ..+.+..-++ .+++..++|+ .+.
T Consensus 245 A~vtl~~l~~~-l~~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~s------p~sD~~~~L~ALdA~v~l~~~~G~-R~v 316 (462)
T 2w3s_A 245 AGVTIAALRAF-AEGPHPALAGLLRRFASEQVRQVATIGGNIANGS------PIGDGPPALIAMGASLTLRRGQER-RRM 316 (462)
T ss_dssp TTCBHHHHHHH-HTTTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTC------TTCSHHHHHHHTTCEEEEEBTTBC-CCC
T ss_pred cCCcHHHHHHH-HHHHhHHHHHHHHHhCChhheeeEEcccccccCC------CcchHHHHHHHcCCEEEEEeCCce-EEE
Confidence 99999999987 444431 11222113479999999765 2355666666 7888888883 333
Q ss_pred CCCCCCchhHhhhcC-CCCceEEEEEEEeeee
Q 008291 256 SEKQNSELFHSVLGG-LGQFGIITRARISLEP 286 (571)
Q Consensus 256 ~~~~~~dL~~~~~Gs-~G~~GIIt~~tl~l~p 286 (571)
.-. |+|..++-. ...=.|||+++|...+
T Consensus 317 p~~---dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 317 PLE---DFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp BGG---GGEEETTEESCCTTCEEEEEEEESCC
T ss_pred EHH---HhhcccccccCCCCcEEEEEEEecCC
Confidence 332 666665432 1223589999997655
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.42 E-value=0.00017 Score=72.55 Aligned_cols=150 Identities=15% Similarity=0.165 Sum_probs=95.9
Q ss_pred CcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCC---CcCCCcEEEEcCCC---CCCeEEEeCCcceEEEE
Q 008291 113 PSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQ---AQAHQGVVINMESL---QGPKMQVYAENSFYVDV 186 (571)
Q Consensus 113 p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~---~~~~~givIdl~~l---~~i~i~i~~~~~~~v~v 186 (571)
+--+++|+|.+|+.++++.. +-...+.+|||++... .....+.+||++++ +. ++.++ ..+++
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~-------~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~--I~~~~---~~l~I 72 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL-------GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVG--IREEG---TDVVI 72 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH-------GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSC--EEEET---TEEEE
T ss_pred ceEEECcCCHHHHHHHHHhc-------CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcc--eEecC---CEEEE
Confidence 45689999999999888642 2346789999996432 22245899999875 55 45544 58999
Q ss_pred cCCCcHHHHHH--HHHhCC--Cc--cCCCCC---CCceeecccccCCccCCCcccccCccccEE-------EEEEEecCC
Q 008291 187 SGGELWINILH--ESVKYG--LA--PKSWTD---YLHLTVGGTLSNAGISGQAFQHGPQISNVH-------QLEVVTGKG 250 (571)
Q Consensus 187 ~aG~~~~~l~~--~l~~~G--l~--~~~~~~---~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~levV~~~G 250 (571)
+|++++.++.+ .+.++- +. .....+ -+..||||+|.++. +..|.+. .+++..++|
T Consensus 73 GA~~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G 143 (288)
T 1n62_C 73 GAMTTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEG 143 (288)
T ss_dssp ETTCBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTE
T ss_pred ccCCcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCc
Confidence 99999999985 333311 11 111111 12469999999773 2455544 677888888
Q ss_pred eEEEcCCCCCCchhHhhhc-CCCCceEEEEEEEeeeec
Q 008291 251 EIINCSEKQNSELFHSVLG-GLGQFGIITRARISLEPA 287 (571)
Q Consensus 251 ~i~~~~~~~~~dL~~~~~G-s~G~~GIIt~~tl~l~p~ 287 (571)
+ .+..-. |+|....- ....--|||+++|...+.
T Consensus 144 ~-r~v~~~---df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 144 A-RIVAAR---DYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp E-EEEEHH---HHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred c-EEEEHH---HHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 4 334322 55554432 223336899999976553
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.77 E-value=0.0011 Score=67.16 Aligned_cols=157 Identities=8% Similarity=0.018 Sum_probs=94.4
Q ss_pred CCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCC---CcCCCcEEEEcCCCCCC-eEEEeCCcceEEE
Q 008291 110 QLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQ---AQAHQGVVINMESLQGP-KMQVYAENSFYVD 185 (571)
Q Consensus 110 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~---~~~~~givIdl~~l~~i-~i~i~~~~~~~v~ 185 (571)
.+.+...++|+|.+|..++++. ++ ...+.+|||++... .....+.+||++++... .|+.++ ..++
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~-------~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~---~~l~ 75 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQ-------HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGP---EGIS 75 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHH-------CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECS---SEEE
T ss_pred cCCCeEEEccCCHHHHHHHHHh-------CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECC---CeEE
Confidence 4567789999999999887643 21 14678999997532 22235789999975422 145543 6899
Q ss_pred EcCCCcHHHHHHHHHhC-------------CCc--cCCCCC---CCceeecccccCCccCCCcccccCccccEE----EE
Q 008291 186 VSGGELWINILHESVKY-------------GLA--PKSWTD---YLHLTVGGTLSNAGISGQAFQHGPQISNVH----QL 243 (571)
Q Consensus 186 v~aG~~~~~l~~~l~~~-------------Gl~--~~~~~~---~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~----~l 243 (571)
++|++++.++.+.+.++ .|. .....+ -+..||||+|.++.. .+...--++ .+
T Consensus 76 IGA~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v 149 (305)
T 3nvz_B 76 FGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKL 149 (305)
T ss_dssp EETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEE
T ss_pred EccCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEE
Confidence 99999999998876532 110 111111 136799999997641 122222222 57
Q ss_pred EEEecCCeEEEcCCCCCCchhHhhhc-CCCCceEEEEEEEeeee
Q 008291 244 EVVTGKGEIINCSEKQNSELFHSVLG-GLGQFGIITRARISLEP 286 (571)
Q Consensus 244 evV~~~G~i~~~~~~~~~dL~~~~~G-s~G~~GIIt~~tl~l~p 286 (571)
++..++|+ .+..-. .|+|.+..- ....--|||++.|...+
T Consensus 150 ~l~~~~G~-R~vp~~--~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 150 TIVSRGTR-RTVPMD--HTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp EEEETTEE-EEEECC--GGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred EEEcCCCc-EEEEee--hHhhcCcccccCCCCcEEEEEEecCCC
Confidence 77888885 223221 034433321 11222489999886543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.34 E-value=0.0029 Score=63.53 Aligned_cols=150 Identities=12% Similarity=0.121 Sum_probs=92.7
Q ss_pred CCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCC---CcCCCcEEEEcCCCCCC-eEEEeCCcceEEEEc
Q 008291 112 LPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQ---AQAHQGVVINMESLQGP-KMQVYAENSFYVDVS 187 (571)
Q Consensus 112 ~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~---~~~~~givIdl~~l~~i-~i~i~~~~~~~v~v~ 187 (571)
.+--+++|+|.+|..++++. . .+ ..+.+|||++... .......+||++++... .++.++ ..++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~--~----~~--a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~---~~l~IG 72 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD--D----PD--ARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSA---GILSVG 72 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH--C----TT--CEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEET---TEEEEE
T ss_pred CCceEECCCCHHHHHHHHhh--C----CC--CEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcC---CEEEEc
Confidence 34568999999999988864 2 23 3568899995422 22235789999985421 145544 589999
Q ss_pred CCCcHHHHHH--HHHhC-CC---ccCCC---CCCCceeecccccCCccCCCcccccCccccEE-------EEEEEecCCe
Q 008291 188 GGELWINILH--ESVKY-GL---APKSW---TDYLHLTVGGTLSNAGISGQAFQHGPQISNVH-------QLEVVTGKGE 251 (571)
Q Consensus 188 aG~~~~~l~~--~l~~~-Gl---~~~~~---~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~levV~~~G~ 251 (571)
|++++.+|.+ .+.++ .. +.... .--+..|+||+|.++. +..|... .+++..++|+
T Consensus 73 A~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~ 143 (288)
T 1t3q_C 73 AMVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGV 143 (288)
T ss_dssp TTCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEE
T ss_pred CCCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCce
Confidence 9999999986 33321 11 11111 1224669999998663 2456554 7778888885
Q ss_pred EEEcCCCCCCchhHhhhc-CCCCceEEEEEEEeee
Q 008291 252 IINCSEKQNSELFHSVLG-GLGQFGIITRARISLE 285 (571)
Q Consensus 252 i~~~~~~~~~dL~~~~~G-s~G~~GIIt~~tl~l~ 285 (571)
.+..-. |+|....- ....--|||+++|...
T Consensus 144 -R~vp~~---dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 144 -RSVSAT---DFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp -EEEEHH---HHEEETTEESCCTTCEEEEEEEECC
T ss_pred -EEEEHH---HHhcCcccccCCCCCEEEEEEecCC
Confidence 333222 44443321 2233368999988654
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=95.80 E-value=0.0094 Score=59.96 Aligned_cols=150 Identities=17% Similarity=0.134 Sum_probs=86.8
Q ss_pred CcEEEeCCCHHHHHHHHHHHHHhCCCCCc-EEEEEcCCCCCCCC---CcCCCcEEEEcCCCCCC-eEEEeCCcceEEEEc
Q 008291 113 PSAVLHPNSVSDIATTVKHIWEMGSHSEL-TVAARGHGHSLQGQ---AQAHQGVVINMESLQGP-KMQVYAENSFYVDVS 187 (571)
Q Consensus 113 p~~vv~P~s~~dv~~~v~~a~~~~~~~~~-~v~~rg~G~s~~g~---~~~~~givIdl~~l~~i-~i~i~~~~~~~v~v~ 187 (571)
+--.++|+|.+|..++++. ++- ...+.+|||++... .......+||++++... .|+.++ ..++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~~-------~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~---~~l~IG 72 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQ-------YKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEE---NTIHIG 72 (296)
T ss_dssp CCEEECCSSHHHHHHHHHH-------TTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECS---SEEEEE
T ss_pred ceeEeCCCCHHHHHHHHHh-------CCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcC---CeEEEc
Confidence 3457899999999877643 322 34578999997521 12245789999986422 145543 689999
Q ss_pred CCCcHHHHHHHH--HhC-C-C--c---cCCCCCCCceeecccccCCccCCCcccccCccccE-------EEEEEEecCCe
Q 008291 188 GGELWINILHES--VKY-G-L--A---PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNV-------HQLEVVTGKGE 251 (571)
Q Consensus 188 aG~~~~~l~~~l--~~~-G-l--~---~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v-------~~levV~~~G~ 251 (571)
|++++.++.+.- .++ . | + .-+..--+..||||+|.|+.. ..|.+ -.+++..++|+
T Consensus 73 A~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p---------~sD~~~~LlAldA~v~l~~~~g~ 143 (296)
T 3hrd_C 73 ALSTFTQIENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSV---------AGDGVSAMTTLDATVVLESVRGT 143 (296)
T ss_dssp TTCBHHHHHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEE
T ss_pred cCCcHHHHHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCCC---------chHHHHHHHHhCcEEEEEcCCce
Confidence 999999987521 111 1 1 0 111111135699999987641 22332 14556667774
Q ss_pred EEEcCCCCCCchhHhhh----cCCCCceEEEEEEEeee
Q 008291 252 IINCSEKQNSELFHSVL----GGLGQFGIITRARISLE 285 (571)
Q Consensus 252 i~~~~~~~~~dL~~~~~----Gs~G~~GIIt~~tl~l~ 285 (571)
.+..-. |+|.... -....--|||++.|...
T Consensus 144 -R~vp~~---dF~~g~~~~~~t~L~~~Eil~~I~iP~~ 177 (296)
T 3hrd_C 144 -RQMKLT---DFFDGEGFKRRNALEADEIMTEVIIDRP 177 (296)
T ss_dssp -EEEEHH---HHHHCCSSSSSSSCCTTCEEEEEEEECC
T ss_pred -EEEEHH---HHhcccccccccCCCCCcEEEEEEecCC
Confidence 223221 4443322 12223358999988643
No 35
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=90.16 E-value=0.15 Score=61.15 Aligned_cols=154 Identities=9% Similarity=0.001 Sum_probs=89.1
Q ss_pred CCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCCC---CcCCCcEEEEcCCCCCC-eEEEeCCcceEEEE
Q 008291 111 LLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQ---AQAHQGVVINMESLQGP-KMQVYAENSFYVDV 186 (571)
Q Consensus 111 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g~---~~~~~givIdl~~l~~i-~i~i~~~~~~~v~v 186 (571)
+.+...++|.|.+|+.++++.. .+ -.+.+|||++.-. .......+||++++... .|+.++ ..+++
T Consensus 231 ~~~~~~~~P~sl~ea~~ll~~~------~~--a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~---~~l~I 299 (1332)
T 3unc_A 231 GERVTWIQASTLKELLDLKAQH------PE--AKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGP---EGISF 299 (1332)
T ss_dssp CSSCEEEECCSHHHHHHHHHHC------TT--CEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECS---SEEEE
T ss_pred CCceEEEccCCHHHHHHHHhhC------CC--CEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeC---CEEEE
Confidence 4556789999999998876531 12 2477899986521 11235679999986422 155554 58999
Q ss_pred cCCCcHHHHHHHHHhC-------------CC--c---cCCCCCCCceeecccccCCccCCCcccccCccccEE----EEE
Q 008291 187 SGGELWINILHESVKY-------------GL--A---PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVH----QLE 244 (571)
Q Consensus 187 ~aG~~~~~l~~~l~~~-------------Gl--~---~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~----~le 244 (571)
+|++++.+|.+.+.++ .| + .-+..--+.+||||+|.++.. .+...--++ .++
T Consensus 300 GA~vtl~~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp------~sD~~~~LlAl~A~v~ 373 (1332)
T 3unc_A 300 GAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLT 373 (1332)
T ss_dssp ETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCT------TCSSHHHHHHTTCEEE
T ss_pred EecChHHHHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCC------chhHHHHHHHcCCEEE
Confidence 9999999998865422 01 0 111111135699999997641 111111111 567
Q ss_pred EEecCCeEEEcCCCCCCc-hhHhhhc-CCCCceEEEEEEEeee
Q 008291 245 VVTGKGEIINCSEKQNSE-LFHSVLG-GLGQFGIITRARISLE 285 (571)
Q Consensus 245 vV~~~G~i~~~~~~~~~d-L~~~~~G-s~G~~GIIt~~tl~l~ 285 (571)
+..++|+. +..-. | +|-+++- .+..=-|||++.|...
T Consensus 374 l~~~~G~R-~ipl~---d~Ff~g~~~t~L~~~Eil~~I~iP~~ 412 (1332)
T 3unc_A 374 IVSRGTRR-TVPMD---HTFFPSYRKTLLGPEEILLSIEIPYS 412 (1332)
T ss_dssp EEETTEEE-EEECC---GGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred EEeCCCcE-EEEhH---HhhhhccccccCCCCcEEEEEEecCC
Confidence 77788863 22222 4 4433321 1122237888877543
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=86.97 E-value=0.1 Score=52.97 Aligned_cols=99 Identities=16% Similarity=0.250 Sum_probs=63.6
Q ss_pred CcEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCC---CCcCCCcEEEEcCCCCCC-eEEEeCCcceEEEEcC
Q 008291 113 PSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQG---QAQAHQGVVINMESLQGP-KMQVYAENSFYVDVSG 188 (571)
Q Consensus 113 p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g---~~~~~~givIdl~~l~~i-~i~i~~~~~~~v~v~a 188 (571)
|--+++|+|.+|..++++ + .+ -.+.+|||++.. ........+||++++... .|+.+++ ..++++|
T Consensus 6 ~f~y~~P~sl~ea~~ll~---~----~~--a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~--~~l~IGA 74 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA---A----EA--TLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLAD--GSLRIGA 74 (324)
T ss_dssp CCEEECCSSHHHHHHHTT---S----TT--EEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTT--SCEEEET
T ss_pred ceEEEccCCHHHHHHHHh---C----CC--CEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCC--CeEEEcc
Confidence 345889999999988775 2 22 457789999742 222345789999987432 2566543 3799999
Q ss_pred CCcHHHHHHHH--HhC-C-C-----ccCCCCCCCceeeccccc
Q 008291 189 GELWINILHES--VKY-G-L-----APKSWTDYLHLTVGGTLS 222 (571)
Q Consensus 189 G~~~~~l~~~l--~~~-G-l-----~~~~~~~~~~~tvGG~~~ 222 (571)
++++.+|.+.- .++ . | ..-+..--+..||||+|.
T Consensus 75 ~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~ 117 (324)
T 1rm6_B 75 GATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLC 117 (324)
T ss_dssp TCBHHHHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHT
T ss_pred CCcHHHHHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeecc
Confidence 99999987642 111 1 1 011222224669999996
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=72.48 E-value=8.5 Score=46.35 Aligned_cols=147 Identities=9% Similarity=-0.019 Sum_probs=80.5
Q ss_pred cEEEeCCCHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCCCC---CCcCCCcEEEEcCCCCCC-eEEEeCCcceEEEEcCC
Q 008291 114 SAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQG---QAQAHQGVVINMESLQGP-KMQVYAENSFYVDVSGG 189 (571)
Q Consensus 114 ~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v~~rg~G~s~~g---~~~~~~givIdl~~l~~i-~i~i~~~~~~~v~v~aG 189 (571)
..-++|.|.+|+.++... . -+.+ +..|+|.+.- .....-.++|++.+.... .++.++ ..++++|+
T Consensus 241 ~~w~~P~tl~el~~l~~~--~----p~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~---~~l~IGA~ 309 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMK--H----PSAP--LVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTK---QGLTLGTG 309 (1335)
T ss_dssp CEEEECSSHHHHHHHHHH--C----TTSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCT---TEEEEETT
T ss_pred ceEecCCCHHHHHHHHHH--C----CCCe--EEEecccceeeEeecCCCCCeEEEcCcchhHheEEecC---CEEEEccc
Confidence 446899999999887542 1 1233 4457776431 112234688998874332 145444 68999999
Q ss_pred CcHHHHHHHHHhC----C-----Cc---------cCCCCCCCceeecccccCCccCCCcccccCcccc-------EEEEE
Q 008291 190 ELWINILHESVKY----G-----LA---------PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISN-------VHQLE 244 (571)
Q Consensus 190 ~~~~~l~~~l~~~----G-----l~---------~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~-------v~~le 244 (571)
+++.++.+.|.+. + .+ .-+..--+.+||||+|+|+.- +.|. =..++
T Consensus 310 vtls~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asP---------isD~~p~L~A~~A~l~ 380 (1335)
T 3zyv_A 310 LSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLP---------TSDLNPILGIGNCILN 380 (1335)
T ss_dssp CBHHHHHHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCT---------TCSSHHHHGGGTCEEE
T ss_pred CcHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccCC---------cchHHHHHHhhCCEEE
Confidence 9999998877631 1 00 111111245799999997641 2222 12456
Q ss_pred EEecCCeEEEcCCCCCCchhH-hhhcC-CCCceEEEEEEEee
Q 008291 245 VVTGKGEIINCSEKQNSELFH-SVLGG-LGQFGIITRARISL 284 (571)
Q Consensus 245 vV~~~G~i~~~~~~~~~dL~~-~~~Gs-~G~~GIIt~~tl~l 284 (571)
+...+|+....-. |.|. .++-. .-.--||+++.+-.
T Consensus 381 l~~~~g~r~i~l~----d~F~~gyrk~~l~~~eil~si~iP~ 418 (1335)
T 3zyv_A 381 VASTEGIQQIPLN----DHFLAGVPDAILKPEQVLISVFVPR 418 (1335)
T ss_dssp EECSSCEEEEECC----TTTSCC----CCCTTCEEEEEEEEC
T ss_pred EecCCceEEEech----HhhhhcccccccCCCcEEEEeeccC
Confidence 6777776544332 3232 23321 12224777776643
No 38
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=28.63 E-value=1e+02 Score=24.31 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=29.2
Q ss_pred CCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 272 GQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 272 G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
..+|-|.++.+...+........++.|.+.+++..+++.+
T Consensus 37 ~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l 76 (105)
T 2dnh_A 37 QPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 76 (105)
T ss_dssp TTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHHH
Confidence 3677799988877664444567889999998877766654
No 39
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.57 E-value=1.1e+02 Score=23.83 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=28.8
Q ss_pred CCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 272 GQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 272 G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
..+|-|.++++...+.........+.|.+.+++..+++.+
T Consensus 39 ~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 78 (100)
T 2do4_A 39 KAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 78 (100)
T ss_dssp TTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHHh
Confidence 3578888888876663344567788999998877766554
No 40
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=25.96 E-value=1.1e+02 Score=24.22 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=29.2
Q ss_pred CceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 273 QFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 273 ~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
.+|-|.++.+...+.........+.|.+.+++.++++.+
T Consensus 52 ~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 90 (107)
T 3ulh_A 52 EFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY 90 (107)
T ss_dssp TTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred hcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHh
Confidence 678888888877764444567788999998887776655
No 41
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=24.97 E-value=1.2e+02 Score=24.54 Aligned_cols=40 Identities=20% Similarity=0.339 Sum_probs=29.8
Q ss_pred CCceEEEEEEEeeeecC-CceEEEEEEeCCHHHHHHHHHHH
Q 008291 272 GQFGIITRARISLEPAP-DMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 272 G~~GIIt~~tl~l~p~p-~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
..+|-|.++.+-..+.. ...-...+.|.+.+++.++++.+
T Consensus 28 ~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~l 68 (110)
T 3s8s_A 28 RKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNL 68 (110)
T ss_dssp TTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHHh
Confidence 57899999988776653 33456788999998877766654
No 42
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=24.05 E-value=1e+02 Score=23.75 Aligned_cols=40 Identities=15% Similarity=0.076 Sum_probs=28.7
Q ss_pred CCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 272 GQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 272 G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
..+|-|.++.+...+.........+.|.+.+++.++++.+
T Consensus 38 ~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 77 (95)
T 2ywk_A 38 LQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALL 77 (95)
T ss_dssp GGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHHH
T ss_pred HhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHHh
Confidence 3578899988776655444567788999988877666554
No 43
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.66 E-value=1.3e+02 Score=23.98 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=29.4
Q ss_pred CCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 272 GQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 272 G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
..+|-|.++.+...+........++.|.+.+++.++++.+
T Consensus 37 ~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 76 (114)
T 2do0_A 37 SMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMF 76 (114)
T ss_dssp TTTSCEEEEEEEECTTCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred HhcCCeEEEEEEECCCCCeeeEEEEEECCHHHHHHHHHHh
Confidence 4678888888776655444567889999998877776655
No 44
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=22.57 E-value=1.2e+02 Score=24.39 Aligned_cols=46 Identities=13% Similarity=0.108 Sum_probs=32.3
Q ss_pred hhhcCCCCceEEEEEEEeeeec--CCceEEEEEEeCCHHHHHHHHHHH
Q 008291 266 SVLGGLGQFGIITRARISLEPA--PDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 266 ~~~Gs~G~~GIIt~~tl~l~p~--p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
.++--.+.+|-|+++.+-..|. ....-.+.+.|.+.++|.+++..+
T Consensus 29 dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~l 76 (105)
T 2pe8_A 29 ETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDL 76 (105)
T ss_dssp HHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHH
Confidence 3333346899999998865443 233467788999998888877765
No 45
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=22.32 E-value=1.3e+02 Score=24.08 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=30.0
Q ss_pred CCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 272 GQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 272 G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
+.+|-|+++.+...+.....-.+.+.|.+.++|.+++..+
T Consensus 49 ~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~l 88 (104)
T 1jmt_A 49 EKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDL 88 (104)
T ss_dssp HHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHH
T ss_pred ccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHHH
Confidence 6889999998865443334567888999998887776665
No 46
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=21.34 E-value=1.1e+02 Score=25.74 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=35.4
Q ss_pred hhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHHHhCCCCCcEE-EEEcCCC
Q 008291 99 HNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTV-AARGHGH 150 (571)
Q Consensus 99 ~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~v-~~rg~G~ 150 (571)
..+...|. ..+.|..|+...+++++.++.+.|.+ .++|. .++=.|+
T Consensus 43 ~~~~~~W~--~~g~~KiVlk~~~e~el~~l~~~a~~----~gl~~~~i~DAG~ 89 (120)
T 1xty_A 43 KEWLNEWL--HQGQPKIIVKVNSLDEIISRAKKAET----MNLPFSIIEDAGK 89 (120)
T ss_dssp HHHHHHHH--HTTCCEEEEEESSHHHHHHHHHHHHH----TTCCEEEEECCSS
T ss_pred HHHHHHHH--HCCCcEEEEecCCHHHHHHHHHHHHH----CCCCEEEEEcCCc
Confidence 44455553 36789999999999999999999999 88885 3444444
No 47
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.32 E-value=1.7e+02 Score=22.77 Aligned_cols=39 Identities=21% Similarity=0.241 Sum_probs=28.3
Q ss_pred CCceEEEEEEEeeeecCCceEEEEEEeCCHHHHHHHHHHH
Q 008291 272 GQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 272 G~~GIIt~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
..+|-|.++.+... ........++.|.+.+++..++..+
T Consensus 37 ~~~G~i~~v~i~~~-~g~~~g~afV~f~~~~~A~~A~~~l 75 (103)
T 2d9p_A 37 SPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEM 75 (103)
T ss_dssp TTTSCEEEEEEEEC-SSSEEEEEEEEESSHHHHHHHHHHH
T ss_pred HhcCCEEEEEEEcC-CCCcCEEEEEEECCHHHHHHHHHHh
Confidence 46788988887765 3334557789999998887776655
No 48
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=20.25 E-value=1.1e+02 Score=24.37 Aligned_cols=22 Identities=9% Similarity=0.006 Sum_probs=19.2
Q ss_pred CcEEEeCCCHHHHHHHHHHHHH
Q 008291 113 PSAVLHPNSVSDIATTVKHIWE 134 (571)
Q Consensus 113 p~~vv~P~s~~dv~~~v~~a~~ 134 (571)
-..++.|++-+|.+++++..++
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~ 27 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRD 27 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHT
T ss_pred EEEEEecCcHHHHHHHHHHHHC
Confidence 3578999999999999998876
No 49
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=20.11 E-value=1.6e+02 Score=24.43 Aligned_cols=50 Identities=24% Similarity=0.248 Sum_probs=35.6
Q ss_pred chhHhhhcCCCCceEEEEEEEeeeecC-----CceEEEEEEeCCHHHHHHHHHHH
Q 008291 262 ELFHSVLGGLGQFGIITRARISLEPAP-----DMVKWIRVLYSDFATFARDQEYL 311 (571)
Q Consensus 262 dL~~~~~Gs~G~~GIIt~~tl~l~p~p-----~~~~~~~~~~~~~~~~~~~~~~l 311 (571)
|+-.-++--.+.+|-|+++.+-..+.. ..+-.+.+.|.+.++|.+++..+
T Consensus 37 dleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~L 91 (118)
T 3ue2_A 37 DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQAL 91 (118)
T ss_dssp THHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHH
Confidence 454555555579999999988776542 23456788999998888777765
Done!