Query 008293
Match_columns 571
No_of_seqs 353 out of 1728
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 22:46:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008293.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008293hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 9E-96 3E-100 757.1 30.9 314 253-570 2-316 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 2.6E-95 9E-100 754.2 32.6 314 252-569 5-319 (319)
3 3uw0_A Pectinesterase; right-h 100.0 7.3E-80 2.5E-84 647.5 28.2 288 252-560 29-364 (364)
4 2nsp_A Pectinesterase A; micha 100.0 1.2E-79 4E-84 643.1 27.9 288 253-560 3-340 (342)
5 3grh_A YBHC, acyl-COA thioeste 100.0 3.4E-75 1.1E-79 614.7 25.4 264 252-526 73-416 (422)
6 1x91_A Invertase/pectin methyl 100.0 3.3E-28 1.1E-32 226.0 13.2 146 32-188 4-150 (153)
7 1xg2_B Pectinesterase inhibito 100.0 5.7E-28 2E-32 224.0 13.6 145 33-188 3-150 (153)
8 2cj4_A Invertase inhibitor; pr 99.9 6.7E-27 2.3E-31 216.6 12.9 143 32-188 3-149 (150)
9 1ru4_A Pectate lyase, PEL9A; p 99.6 1.1E-14 3.8E-19 155.3 21.3 141 252-409 13-176 (400)
10 1dbg_A Chondroitinase B; beta 99.4 1.4E-12 4.8E-17 142.5 14.6 147 255-426 25-208 (506)
11 2inu_A Insulin fructotransfera 98.6 1.6E-07 5.5E-12 98.8 10.5 136 288-426 58-228 (410)
12 2pyg_A Poly(beta-D-mannuronate 98.2 3.2E-05 1.1E-09 81.0 18.3 52 265-325 18-78 (377)
13 3eqn_A Glucan 1,3-beta-glucosi 97.8 0.0005 1.7E-08 77.5 18.6 149 266-420 66-237 (758)
14 1bhe_A PEHA, polygalacturonase 97.4 0.007 2.4E-07 63.6 18.9 110 338-461 152-276 (376)
15 3gq8_A Preneck appendage prote 97.4 0.0086 2.9E-07 66.3 20.2 172 267-458 40-272 (609)
16 1pxz_A Major pollen allergen J 97.4 0.0028 9.7E-08 66.0 15.5 100 267-390 56-176 (346)
17 3jur_A EXO-poly-alpha-D-galact 97.2 0.0056 1.9E-07 65.9 15.6 142 339-495 192-352 (448)
18 1qcx_A Pectin lyase B; beta-he 97.1 0.01 3.5E-07 62.1 16.4 69 339-408 125-201 (359)
19 3gqn_A Preneck appendage prote 97.1 0.019 6.4E-07 64.9 19.1 144 267-424 40-244 (772)
20 2iq7_A Endopolygalacturonase; 97.0 0.0059 2E-07 63.3 13.4 201 266-493 8-254 (339)
21 1hg8_A Endopolygalacturonase; 97.0 0.011 3.8E-07 61.5 14.9 137 339-493 104-266 (349)
22 1h80_A IOTA-carrageenase; hydr 96.8 0.029 1E-06 60.5 17.2 178 265-460 38-271 (464)
23 1nhc_A Polygalacturonase I; be 96.8 0.0078 2.7E-07 62.3 12.1 138 339-494 102-254 (336)
24 1rmg_A Rgase A, rhamnogalactur 96.8 0.016 5.6E-07 61.8 14.7 144 266-424 37-217 (422)
25 2qy1_A Pectate lyase II; GAG l 96.7 0.0077 2.6E-07 62.3 11.5 129 267-425 24-173 (330)
26 2uvf_A Exopolygalacturonase; G 96.7 0.028 9.5E-07 62.8 16.2 108 340-460 334-461 (608)
27 1idk_A Pectin lyase A; signal, 96.6 0.0097 3.3E-07 62.2 11.5 89 301-407 104-200 (359)
28 1czf_A Polygalacturonase II; b 96.6 0.022 7.7E-07 59.5 14.0 173 266-461 35-252 (362)
29 3vmv_A Pectate lyase; polysacc 96.5 0.043 1.5E-06 56.6 14.8 137 254-424 21-173 (326)
30 1pcl_A Pectate lyase E; lyase 96.4 0.12 4.2E-06 53.7 18.2 129 308-461 80-228 (355)
31 1air_A Pectate lyase C, PELC; 96.3 0.023 7.8E-07 59.3 11.9 137 266-425 26-187 (353)
32 1ia5_A Polygalacturonase; glyc 96.2 0.053 1.8E-06 56.1 14.1 202 266-494 12-259 (339)
33 3zsc_A Pectate trisaccharide-l 96.2 0.023 8E-07 58.8 11.1 85 287-391 47-143 (340)
34 1gq8_A Pectinesterase; hydrola 96.0 0.04 1.4E-06 56.6 11.6 114 337-459 114-242 (319)
35 1pe9_A Pectate lyase A; parall 95.9 0.043 1.5E-06 57.4 11.7 119 286-425 53-205 (361)
36 1xg2_A Pectinesterase 1; prote 95.7 0.044 1.5E-06 56.3 10.5 114 337-459 110-238 (317)
37 2nsp_A Pectinesterase A; micha 95.7 0.057 2E-06 56.0 11.2 78 341-426 136-230 (342)
38 2o04_A Pectate lyase, PL; hexa 95.3 0.12 3.9E-06 54.8 12.0 128 307-459 126-275 (399)
39 3uw0_A Pectinesterase; right-h 95.2 0.1 3.4E-06 54.6 11.2 112 365-492 114-253 (364)
40 3grh_A YBHC, acyl-COA thioeste 95.0 0.14 4.7E-06 54.3 11.5 112 366-493 194-330 (422)
41 1x0c_A Isopullulanase; glycosi 94.8 0.3 1E-05 53.7 14.2 108 342-461 290-406 (549)
42 1k5c_A Endopolygalacturonase; 94.5 0.079 2.7E-06 54.8 8.2 133 343-493 104-250 (335)
43 1vbl_A Pectate lyase 47; PL 47 94.4 0.25 8.5E-06 52.5 12.0 101 307-425 131-250 (416)
44 1ogo_X Dextranase; hydrolase, 93.0 1 3.6E-05 49.7 14.1 107 343-461 331-444 (574)
45 2iq7_A Endopolygalacturonase; 88.0 4.8 0.00016 41.2 12.9 113 343-461 130-256 (339)
46 2x6w_A Tail spike protein; vir 87.4 1.4 4.9E-05 48.6 8.7 42 266-316 64-119 (600)
47 2uvf_A Exopolygalacturonase; G 86.2 7.6 0.00026 43.1 14.0 109 342-460 360-490 (608)
48 1ogo_X Dextranase; hydrolase, 85.8 13 0.00044 41.0 15.4 79 344-426 355-443 (574)
49 1ru4_A Pectate lyase, PEL9A; p 85.6 6.3 0.00021 41.5 12.4 84 339-426 131-230 (400)
50 1ia5_A Polygalacturonase; glyc 84.7 4 0.00014 41.9 10.2 114 342-461 133-260 (339)
51 3eqn_A Glucan 1,3-beta-glucosi 81.6 5.6 0.00019 45.0 10.3 102 265-383 416-531 (758)
52 1hg8_A Endopolygalacturonase; 81.6 3.8 0.00013 42.2 8.5 112 343-460 134-267 (349)
53 1rmg_A Rgase A, rhamnogalactur 79.9 11 0.00037 39.9 11.5 19 365-383 199-217 (422)
54 1x0c_A Isopullulanase; glycosi 79.1 10 0.00036 41.5 11.4 78 345-426 318-405 (549)
55 1k5c_A Endopolygalacturonase; 79.0 10 0.00034 38.8 10.6 112 342-460 125-251 (335)
56 1czf_A Polygalacturonase II; b 79.0 5.5 0.00019 41.3 8.7 82 344-425 156-250 (362)
57 1bhe_A PEHA, polygalacturonase 78.9 14 0.00048 38.2 11.8 108 344-460 182-304 (376)
58 1nhc_A Polygalacturonase I; be 77.1 5.9 0.0002 40.5 8.2 114 343-461 129-255 (336)
59 2vbk_A Tailspike-protein; vira 75.9 30 0.001 36.9 13.1 47 265-319 67-119 (514)
60 3jur_A EXO-poly-alpha-D-galact 70.0 53 0.0018 34.8 13.8 11 449-459 375-385 (448)
61 3gqn_A Preneck appendage prote 64.6 60 0.0021 36.8 13.2 20 373-392 234-253 (772)
62 1dbg_A Chondroitinase B; beta 59.4 43 0.0015 36.2 10.6 94 367-461 88-209 (506)
63 2inu_A Insulin fructotransfera 55.9 48 0.0016 34.8 9.8 66 337-406 161-247 (410)
64 3gq8_A Preneck appendage prote 55.1 34 0.0012 37.8 9.0 20 373-392 234-253 (609)
65 1vcl_A Hemolytic lectin CEL-II 54.0 0.83 2.8E-05 48.7 -4.0 91 257-359 295-394 (432)
66 1h80_A IOTA-carrageenase; hydr 23.7 1.3E+02 0.0043 32.1 6.9 79 341-425 171-270 (464)
67 3dxr_B Mitochondrial import in 21.3 3.4E+02 0.012 22.3 8.2 33 92-124 55-87 (95)
68 3cjh_B Mitochondrial import in 20.9 1.3E+02 0.0044 22.7 4.6 30 92-121 33-62 (64)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=9e-96 Score=757.10 Aligned_cols=314 Identities=56% Similarity=0.940 Sum_probs=300.1
Q ss_pred cceEEEcCCCCCCcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeEEeeccCcceEEeecCCCceEEeccccccCCc
Q 008293 253 DQMVVVNPNGTADYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYVSIPKQKKNLMMIGAGKGLTVITGNRSYVDGW 332 (571)
Q Consensus 253 ~~~~~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g~ 332 (571)
+++++|++||+|+|+|||+||+++|+++ ++|++|+|+||+|+|+|.|++.|++|||+|+|+++|+|+++.+..+|.
T Consensus 2 ~~~i~V~~dGsg~f~TIq~AI~aap~~~----~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~ 77 (317)
T 1xg2_A 2 IANAVVAQDGTGDYQTLAEAVAAAPDKS----KTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGS 77 (317)
T ss_dssp CCSEEECTTSCSSBSSHHHHHHHSCSSC----SSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTC
T ss_pred CceEEECCCCCCCcccHHHHHhhcccCC----CceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccCCC
Confidence 4689999999999999999999999984 468999999999999999999999999999999999999999888899
Q ss_pred ccccceeEEEEcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCceeeeecEEeeccceeec
Q 008293 333 TTFNTATFAVVGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYGTIDFIFG 412 (571)
Q Consensus 333 ~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G~vDfIfG 412 (571)
+|++++||.|.+++|+++||||+|++|+.++|||||++.+|+++||||+|+|||||||++.+||||++|+|+|+||||||
T Consensus 78 ~t~~satv~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG 157 (317)
T 1xg2_A 78 TTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFG 157 (317)
T ss_dssp CSGGGCSEEECSTTCEEESCEEEECCCGGGCCCCSEEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEESSSCEEE
T ss_pred cccceeEEEEECCCEEEEEeEEecccCCccCceEEEEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEeceeEEcC
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeeceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecCCccccccccceEeeccccCCCcEEEeccCCC
Q 008293 413 NAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAADDLANSINATQTYLGRPWKEYSRTVYMQSFMD 492 (571)
Q Consensus 413 ~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~l~ 492 (571)
++++|||+|+|+++++++++.++||||||+++.+++||||+||+|++++++.+.....++||||||++|+|+|||+|+|+
T Consensus 158 ~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~ 237 (317)
T 1xg2_A 158 NAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLG 237 (317)
T ss_dssp CCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTTCEEEEESCEEC
T ss_pred CceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCCceEEEEecccC
Confidence 99999999999999988788899999999999999999999999999987765545568999999999999999999999
Q ss_pred CccCCCCCCCCCCCCCCcccEEEEeccccCCCCCCCcccCCCCCcCC-HHHHccccccccccCCCCCCCCCCCCCCCCC
Q 008293 493 SLIDPAGWKEWSGDFALNTTYYAEFSNTGPGSDTTNRVTWPGYHVIN-DTDAECFTVSSFIEGDAWLPETGVPFDGDLL 570 (571)
Q Consensus 493 ~~i~p~GW~~w~~~~~~~~~~f~Ey~n~GpGa~~~~Rv~w~~~~~l~-~~ea~~~t~~~fi~g~~W~p~~~~p~~~~~~ 570 (571)
++|+|+||.+|++++++++++|+||+|+|||+++++||+|+++|+|+ ++||++||+.+||+|++|+|.++|||.+||.
T Consensus 238 ~~I~p~GW~~w~~~~~~~t~~~~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~~ 316 (317)
T 1xg2_A 238 GLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGLY 316 (317)
T ss_dssp TTBCTTCSCCSSTTTTTTTCEEEEESCBSTTCCCTTSCCCTTEEEECCHHHHGGGSHHHHSCTHHHHGGGCCCCCCSSC
T ss_pred CcccccccccCCCCCCcCceEEEEEcCCCCCCCcccccccccccccCCHHHHHHhhHHhhcCCCCCcCCCCcccccccc
Confidence 99999999999999999999999999999999999999999988885 6899999999999999999999999999985
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=2.6e-95 Score=754.25 Aligned_cols=314 Identities=56% Similarity=0.936 Sum_probs=299.9
Q ss_pred ccceEEEcCCCCCCcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeEEeeccCcceEEeecCCCceEEeccccccCC
Q 008293 252 VDQMVVVNPNGTADYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYVSIPKQKKNLMMIGAGKGLTVITGNRSYVDG 331 (571)
Q Consensus 252 ~~~~~~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g 331 (571)
++++++|++||+|+|+|||+||+++|+++ ++|++|+|+||+|+|+|.|++.|++|||+|+|+++|+|+++.+..+|
T Consensus 5 ~~~~i~V~~dGsg~f~TIq~AI~aap~~~----~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g 80 (319)
T 1gq8_A 5 VGPNVVVAADGSGDYKTVSEAVAAAPEDS----KTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDG 80 (319)
T ss_dssp SCCSEEECTTSCSSBSSHHHHHHHSCSSC----SSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTTT
T ss_pred ccceEEECCCCCCCccCHHHHHHhccccC----CceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccCC
Confidence 56899999999999999999999999984 46899999999999999999999999999999999999999988889
Q ss_pred cccccceeEEEEcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCceeeeecEEeeccceee
Q 008293 332 WTTFNTATFAVVGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYGTIDFIF 411 (571)
Q Consensus 332 ~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G~vDfIf 411 (571)
++|++++||.|.+++|+++||||+|++|+.++|||||++.+|+++||||+|+|||||||++.+||||++|+|+|+|||||
T Consensus 81 ~~t~~satv~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIf 160 (319)
T 1gq8_A 81 STTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIF 160 (319)
T ss_dssp CCTGGGCSEEECSTTCEEEEEEEEECCCGGGCCCCSEEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEESSSCEE
T ss_pred CCccceEEEEEECCCEEEEEeEeEccCCCcCCceEEEEecCCcEEEEEeEECccceeeeecCccEEEEecEEEeeeeEEe
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeeceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecCCccccccccceEeeccccCCCcEEEeccCC
Q 008293 412 GNAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAADDLANSINATQTYLGRPWKEYSRTVYMQSFM 491 (571)
Q Consensus 412 G~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~l 491 (571)
|++++|||+|+|+++++++++.++||||||+++++++||||+||+|++++++.+.....++||||||++|+|+|||+|+|
T Consensus 161 G~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~ 240 (319)
T 1gq8_A 161 GNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSI 240 (319)
T ss_dssp ESCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEEESCEE
T ss_pred cCCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcceEEEEeccC
Confidence 99999999999999998878889999999999999999999999999998775544456899999999999999999999
Q ss_pred CCccCCCCCCCCCCCCCCcccEEEEeccccCCCCCCCcccCCCCCcCC-HHHHccccccccccCCCCCCCCCCCCCCCC
Q 008293 492 DSLIDPAGWKEWSGDFALNTTYYAEFSNTGPGSDTTNRVTWPGYHVIN-DTDAECFTVSSFIEGDAWLPETGVPFDGDL 569 (571)
Q Consensus 492 ~~~i~p~GW~~w~~~~~~~~~~f~Ey~n~GpGa~~~~Rv~w~~~~~l~-~~ea~~~t~~~fi~g~~W~p~~~~p~~~~~ 569 (571)
+++|+|+||.+|++++++++++|+||+|+|||+++++||+|+++|+|+ ++||++||+.+||+|++|+|.++|||.+||
T Consensus 241 ~~~I~p~GW~~w~~~~~~~t~~y~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 319 (319)
T 1gq8_A 241 TNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319 (319)
T ss_dssp CTTBCTTCCCCSSTTTTTTTCEEEEESCBSGGGCCTTCCCCTTEEECCCHHHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred CCcccccccCcCCCCCCCCeeEEEEEccccCCCCcccccccccccccCCHHHHHhhhHHhhcCCCCCcCCCCccccCCC
Confidence 999999999999999899999999999999999999999999988885 589999999999999999999999999997
No 3
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=7.3e-80 Score=647.51 Aligned_cols=288 Identities=30% Similarity=0.555 Sum_probs=240.7
Q ss_pred ccceEEEcCC-CCCCcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeEEeeccCcceEEeecCCCceEEecccccc-
Q 008293 252 VDQMVVVNPN-GTADYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYVSIPKQKKNLMMIGAGKGLTVITGNRSYV- 329 (571)
Q Consensus 252 ~~~~~~V~~d-g~g~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~- 329 (571)
...+++|++| |+|+|+|||+||+++|+++ +|++|+|+||+|+|+|.|+| ++|||+|+|+++|+|+++.+..
T Consensus 29 ~~~~~~V~~~~g~g~f~TIq~Ai~aa~~~~-----~~~~I~I~~G~Y~E~v~I~k--~~itl~G~g~~~TiIt~~~~~~~ 101 (364)
T 3uw0_A 29 AQYNAVVSTTPQGDEFSSINAALKSAPKDD-----TPFIIFLKNGVYTERLEVAR--SHVTLKGENRDGTVIGANTAAGM 101 (364)
T ss_dssp ---------------CCCHHHHHHHSCSSS-----SCEEEEECSEEECCCEEECS--TTEEEEESCTTTEEEEECCCTTS
T ss_pred cCceEEEcCCCCCCCcccHHHHHhhcccCC-----CcEEEEEeCCEEEEEEEEcC--CeEEEEecCCCCeEEEccccccc
Confidence 3478999999 9999999999999999873 47999999999999999974 6899999999999999987532
Q ss_pred -----CCcccccceeEEEEcCcEEEEEeEeecCCC-----------C---Cccceeeeec--CCCceEEEeceeecccce
Q 008293 330 -----DGWTTFNTATFAVVGQGFVAVNITFRNTAG-----------P---TKHQAVAVRN--GADKSTFYSCSFEGYQDT 388 (571)
Q Consensus 330 -----~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g-----------~---~~~qAvAl~~--~~d~~~~~~c~~~g~QDT 388 (571)
++++|++++||.|.+++|+++||||+|+++ | ..+|||||++ ++|+++||||+|+|||||
T Consensus 102 ~~~~g~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDT 181 (364)
T 3uw0_A 102 LNPQGEKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDT 181 (364)
T ss_dssp BCTTCSBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSC
T ss_pred cccccccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccc
Confidence 346789999999999999999999999985 2 3589999999 599999999999999999
Q ss_pred eecc-CCceeeeecEEeeccceeeccceEEEeeceeeecCCCC--CCceeEEecCCCCCCCCeEEEEEcCEEeecCCccc
Q 008293 389 LYAH-SLRQFYRDCDIYGTIDFIFGNAAVVFQNCNMYPRRPLD--NQFNAITAQGRTDPNQNTGISIHNCTIKAADDLAN 465 (571)
Q Consensus 389 l~~~-~~r~~~~~c~I~G~vDfIfG~~~avf~~c~i~~~~~~~--~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~ 465 (571)
||++ .+||||++|+|+|+||||||+|++|||+|+|+++++.. ++.++||||+ +++++++||||+||+|++++++.
T Consensus 182 Ly~~~~gr~yf~~c~I~GtvDFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~-~~~~~~~G~vf~~c~i~~~~~~~- 259 (364)
T 3uw0_A 182 LYSKTGSRSYFSDCEISGHVDFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPS-TLTTSPYGLIFINSRLTKEPGVP- 259 (364)
T ss_dssp EEECTTCEEEEESCEEEESEEEEEESSEEEEESCEEEECCCSSCSSCCEEEEEEC-CCTTCSCCEEEESCEEEECTTCC-
T ss_pred eEeCCCCCEEEEcCEEEcCCCEECCcceEEEEeeEEEEeccCcccCCccEEEeCC-cCCCCCcEEEEEeeEEecCCCCc-
Confidence 9999 89999999999999999999999999999999986532 3468999995 56789999999999999987643
Q ss_pred cccccceEeeccccCC--------------CcEEEeccCCCCccCCCCCCCCCCCC--------CCcccEEEEeccccCC
Q 008293 466 SINATQTYLGRPWKEY--------------SRTVYMQSFMDSLIDPAGWKEWSGDF--------ALNTTYYAEFSNTGPG 523 (571)
Q Consensus 466 ~~~~~~~yLGRpW~~~--------------s~~v~~~s~l~~~i~p~GW~~w~~~~--------~~~~~~f~Ey~n~GpG 523 (571)
..++||||||++| +|||||+|+|+++| +||.+|++.. ..++++|+||+|+|||
T Consensus 260 ---~~~~yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW~~w~~~~~~~~~~~~~~~~~~f~Ey~n~GpG 334 (364)
T 3uw0_A 260 ---ANSFALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI--YGWDKMSGKDKQGEKIWFYPQDSRFFEANSQGPG 334 (364)
T ss_dssp ---SSCEEEECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE--EECCCEEEECTTSCEEEECGGGSEEEEESCBSTT
T ss_pred ---cccEEeccccccccccccccccccCccceEEEEeCCCCcee--ecccccCCCCccCceeeeccCCceEEEEeCCCCC
Confidence 2478999999985 49999999999999 9999998642 2345689999999999
Q ss_pred CCCCCcccCCCCCcCCHHHHccccccccccCCCCCCC
Q 008293 524 SDTTNRVTWPGYHVINDTDAECFTVSSFIEGDAWLPE 560 (571)
Q Consensus 524 a~~~~Rv~w~~~~~l~~~ea~~~t~~~fi~g~~W~p~ 560 (571)
|+++.+. ++|+++||++||+++||+| |+|.
T Consensus 335 a~~~~~r-----~~ls~~ea~~~t~~~~l~g--W~P~ 364 (364)
T 3uw0_A 335 AAINEGR-----RQLSAEQLKAFTLPMIFPD--WAVH 364 (364)
T ss_dssp CCCSTTS-----CBCCHHHHGGGSHHHHSTT--CCC-
T ss_pred CCcCCce-----eECCHHHHhhccHHHhhcC--CCCC
Confidence 9865321 4799999999999999965 9995
No 4
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=1.2e-79 Score=643.12 Aligned_cols=288 Identities=32% Similarity=0.567 Sum_probs=255.2
Q ss_pred cceEEEc--CCCCCCcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeEEeeccCcceEEeecCCCceEEecccccc-
Q 008293 253 DQMVVVN--PNGTADYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYVSIPKQKKNLMMIGAGKGLTVITGNRSYV- 329 (571)
Q Consensus 253 ~~~~~V~--~dg~g~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~- 329 (571)
..+++|+ +||+|+|+|||+||+++|+++ +|++|+|+||+|+|+|.|+| ++|||+|+|+++|+|+++.+..
T Consensus 3 ~~~~vV~~~~~g~g~f~TIq~Ai~aap~~~-----~~~~I~I~~G~Y~E~V~I~k--~~Itl~G~g~~~tiI~~~~~~~~ 75 (342)
T 2nsp_A 3 TYNAVVSKSSSDGKTFKTIADAIASAPAGS-----TPFVILIKNGVYNERLTITR--NNLHLKGESRNGAVIAAATAAGT 75 (342)
T ss_dssp CCSEEECSCSSSCSCBSSHHHHHHTSCSSS-----SCEEEEECSEEEECCEEECS--TTEEEEESCTTTEEEEECCCTTC
T ss_pred ccEEEEccCCCCCCCcchHHHHHHhcccCC-----CcEEEEEeCCEEEEEEEEec--CeEEEEecCCCCeEEEecccccc
Confidence 4689999 999999999999999999873 58999999999999999975 6899999999999999986431
Q ss_pred -----CCcccccceeEEEEcCcEEEEEeEeecCC-----------CC---Cccceeee--ecCCCceEEEeceeecccce
Q 008293 330 -----DGWTTFNTATFAVVGQGFVAVNITFRNTA-----------GP---TKHQAVAV--RNGADKSTFYSCSFEGYQDT 388 (571)
Q Consensus 330 -----~g~~t~~sat~~v~~~~f~~~~lt~~Nt~-----------g~---~~~qAvAl--~~~~d~~~~~~c~~~g~QDT 388 (571)
++++|+.++||.|.+++|+++||||+|++ ++ .++||||| ++.+|+++||+|+|+|||||
T Consensus 76 ~~~~g~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDT 155 (342)
T 2nsp_A 76 LKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQAT 155 (342)
T ss_dssp BCTTSCBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTC
T ss_pred cccccCcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccce
Confidence 24678899999999999999999999998 22 36899999 99999999999999999999
Q ss_pred eeccCCceeeeecEEeeccceeeccceEEEeeceeeecCCC-CCC---ceeEEecCCCCCCCCeEEEEEcCEEeecCCcc
Q 008293 389 LYAHSLRQFYRDCDIYGTIDFIFGNAAVVFQNCNMYPRRPL-DNQ---FNAITAQGRTDPNQNTGISIHNCTIKAADDLA 464 (571)
Q Consensus 389 l~~~~~r~~~~~c~I~G~vDfIfG~~~avf~~c~i~~~~~~-~~~---~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~ 464 (571)
||++.+||||++|+|+|+||||||+|++|||+|+|+++++. .++ .++||||+ +++.+++||||+||+|++++++.
T Consensus 156 Ly~~~gr~~~~~c~I~G~vDFIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~-~~~~~~~G~vf~~c~i~~~~~~~ 234 (342)
T 2nsp_A 156 LYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSV 234 (342)
T ss_dssp EEECSSEEEEESCEEEESEEEEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEEC-CBTTCSCCEEEESCEEEESSTTS
T ss_pred EEECCCCEEEEcCEEEeceEEEeCCceEEEecCEEEEecCcccccccCceEEEccC-CCCCCCCEEEEEcCEEecCCCCC
Confidence 99999999999999999999999999999999999998752 222 38999995 56889999999999999987643
Q ss_pred ccccccceEeeccccCCC--------------cEEEeccCCCCccCCCCCCCCCCC--------CCCcccEEEEeccccC
Q 008293 465 NSINATQTYLGRPWKEYS--------------RTVYMQSFMDSLIDPAGWKEWSGD--------FALNTTYYAEFSNTGP 522 (571)
Q Consensus 465 ~~~~~~~~yLGRpW~~~s--------------~~v~~~s~l~~~i~p~GW~~w~~~--------~~~~~~~f~Ey~n~Gp 522 (571)
+ ..++||||||++|| |+|||+|+|+++|+ ||.+|++. +.+++++|+||+|+||
T Consensus 235 ~---~~~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW~~w~~~~~~~~~~~~~~~~~~f~EY~n~Gp 309 (342)
T 2nsp_A 235 P---AKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGA 309 (342)
T ss_dssp C---TTCEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTTEE--ECCCEEEECTTSCEEEECGGGSEEEEESCBST
T ss_pred c---cccEEEEeccccccccccccccCCccceeEEEEccccCcccc--cccccCCCCccCceeecccCccEEEEEecccC
Confidence 3 24799999999999 99999999999998 99999874 3446789999999999
Q ss_pred CCCCCCcccCCCCCcCCHHHHccccccccccCCCCCCC
Q 008293 523 GSDTTNRVTWPGYHVINDTDAECFTVSSFIEGDAWLPE 560 (571)
Q Consensus 523 Ga~~~~Rv~w~~~~~l~~~ea~~~t~~~fi~g~~W~p~ 560 (571)
|++++ +|. ++|+++||++|++.+||+ +|+|.
T Consensus 310 Ga~~~---~~~--~~l~~~ea~~~t~~~~i~--~W~p~ 340 (342)
T 2nsp_A 310 GATVS---KDR--RQLTDAQAAEYTQSKVLG--DWTPT 340 (342)
T ss_dssp TCCCS---TTS--CBCCHHHHGGGSHHHHHT--TCCCC
T ss_pred CCCCC---CCc--eECCHHHHHhhhHHhhhc--cCCCC
Confidence 99874 222 589999999999999996 49996
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=3.4e-75 Score=614.71 Aligned_cols=264 Identities=28% Similarity=0.334 Sum_probs=231.3
Q ss_pred ccceEEEcCCCCC--CcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeEEeeccCcceEEeecCCCceEEecccc--
Q 008293 252 VDQMVVVNPNGTA--DYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYVSIPKQKKNLMMIGAGKGLTVITGNRS-- 327 (571)
Q Consensus 252 ~~~~~~V~~dg~g--~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v~i~~~~~~itl~G~g~~~tiI~~~~~-- 327 (571)
.+++++|++||+| +|+|||+||+++|+.. +++|++|+||||+|+|+|.|++.|++|||+|+|.++++|+...+
T Consensus 73 ~~~~ivVa~dGsG~~~f~TIqeAVdaap~~~---~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~ 149 (422)
T 3grh_A 73 AQPDFVVGPAGTQGVTHTTIQAAVDAAIIKR---TNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLD 149 (422)
T ss_dssp SSCSEEECSTTCTTCCBSSHHHHHHHHHTTC---CSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGGGEEEEECCC
T ss_pred CCccEEEeCCCCCCcCcCCHHHHHHhchhcC---CCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCceEEEeeccc
Confidence 4679999999998 9999999999997542 35689999999999999999999999999999998877654321
Q ss_pred -----------------cc-----------------CCcccccceeEEEEcCcEEEEEeEeecCCCC----Cccceeeee
Q 008293 328 -----------------YV-----------------DGWTTFNTATFAVVGQGFVAVNITFRNTAGP----TKHQAVAVR 369 (571)
Q Consensus 328 -----------------~~-----------------~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~----~~~qAvAl~ 369 (571)
.. ...+|+.||||.|.+++|+++||||+|++|+ .++|||||+
T Consensus 150 ~~~~~~d~~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~ 229 (422)
T 3grh_A 150 GGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALR 229 (422)
T ss_dssp TTSCHHHHHHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEE
T ss_pred ccccccccccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEE
Confidence 01 1235788999999999999999999999986 468999999
Q ss_pred cCCCceEEEeceeecccceeec------------cCCceeeeecEEeeccceeeccceEEEeeceeeecCCCCCCceeEE
Q 008293 370 NGADKSTFYSCSFEGYQDTLYA------------HSLRQFYRDCDIYGTIDFIFGNAAVVFQNCNMYPRRPLDNQFNAIT 437 (571)
Q Consensus 370 ~~~d~~~~~~c~~~g~QDTl~~------------~~~r~~~~~c~I~G~vDfIfG~~~avf~~c~i~~~~~~~~~~~~it 437 (571)
+.+|+++||+|+|+|||||||+ +.+||||++|+|+|+||||||+|++|||+|+|+++++..++.++||
T Consensus 230 v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG~a~AvFe~C~I~s~~~~~~~~g~IT 309 (422)
T 3grh_A 230 TDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVF 309 (422)
T ss_dssp ECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEESSEEEEESCEEEECCSSCSSCCEEE
T ss_pred ecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEeccccEEccCceEEEEeeEEEEecCCCCCceEEE
Confidence 9999999999999999999998 5799999999999999999999999999999999987655678999
Q ss_pred ecCCCCCCCCeEEEEEcCEEeecCCccccccccceEeeccccCCCc----EEEeccCCCCccCC-CCCCCCCCC---CCC
Q 008293 438 AQGRTDPNQNTGISIHNCTIKAADDLANSINATQTYLGRPWKEYSR----TVYMQSFMDSLIDP-AGWKEWSGD---FAL 509 (571)
Q Consensus 438 A~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~----~v~~~s~l~~~i~p-~GW~~w~~~---~~~ 509 (571)
|+ |+++.+++||||+||+|+++++ .++||||||++|+| ||||+|+|+++|+| +||.+|... |..
T Consensus 310 A~-~t~~~~~~Gfvf~nC~ita~~~-------~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~f~~ 381 (422)
T 3grh_A 310 AP-ATLSNIYYGFLAVNSRFNAFGD-------GVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAG 381 (422)
T ss_dssp EE-CCBTTCCCCEEEESCEEEECSS-------SCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCCCCC
T ss_pred ec-CCCCCCCCEEEEECCEEEeCCC-------CCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCCccc
Confidence 98 7889999999999999998653 37999999999998 79999999999998 999999432 211
Q ss_pred ------------------cccEEEEeccccCCCCC
Q 008293 510 ------------------NTTYYAEFSNTGPGSDT 526 (571)
Q Consensus 510 ------------------~~~~f~Ey~n~GpGa~~ 526 (571)
...+|+||+|+|||+-.
T Consensus 382 ~~~~~~~~~~~~r~l~~~~~nR~~ey~n~g~g~~~ 416 (422)
T 3grh_A 382 NTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKV 416 (422)
T ss_dssp CCCEEETTTEEECCTTCTTSCEEEEESCBSGGGC-
T ss_pred ccccccccccccccCCCcchhheeEecccCCCccc
Confidence 35689999999999853
No 6
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=99.95 E-value=3.3e-28 Score=225.97 Aligned_cols=146 Identities=16% Similarity=0.187 Sum_probs=130.6
Q ss_pred CccchhcccCCCCCcccccccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhHHHHHHHHHHHHHH
Q 008293 32 FSSTLDPICKFTPHPDFCKANLPGN-KPGTVHDYGRYSVHQSLSVARKFQSLVDHYRKLPSTSYLSTIRALEDCSLLAGM 110 (571)
Q Consensus 32 ~~~~V~~~C~~T~yp~lC~ssL~s~-~~~dp~~L~~~av~~a~~~a~~a~~~i~~ll~~~~~~d~~~k~AL~DC~ely~d 110 (571)
.+..|+.+|++|+||++|+++|.+. ...+|++|++++|++++++++.+...+++++... .+++.+.||+||.|+|++
T Consensus 4 ~~~~i~~~C~~T~~~~~C~~sL~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~~ 81 (153)
T 1x91_A 4 DSSEMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGG--VDPRSKLAYRSCVDEYES 81 (153)
T ss_dssp -CCSTTTGGGGSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCCCChhHHHHHhCcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999432 3579999999999999999999999999987553 489999999999999999
Q ss_pred HHHHHHHHHHHHhccCCccccChhhHHHHHHHHhhhHHHHHhhhcCCccchhhhHhhhhhhhhHHHHHHHHHHhhhcc
Q 008293 111 NVDSLSHASNTINSTNTLHSLQADDLHTLLSALLTNQQTCLDGLLETASASRITQALLAPLQNGAKFYSISLALVIHG 188 (571)
Q Consensus 111 aid~L~~S~~~l~~~~~~~~~~~~Dv~twLSAAlT~q~TC~DgF~e~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~~ 188 (571)
++++|++++.+|+. .+++|+++|||+||||++||+|||.+.+ .++++|...+.++.+|+||+|+|++.+
T Consensus 82 a~~~L~~a~~~l~~------~~~~d~~t~lSaAlt~~~tC~dgf~~~~---~~~~~l~~~~~~~~~l~s~aLai~~~l 150 (153)
T 1x91_A 82 AIGNLEEAFEHLAS------GDGMGMNMKVSAALDGADTCLDDVKRLR---SVDSSVVNNSKTIKNLCGIALVISNML 150 (153)
T ss_dssp HHHHHHHHHHHHHT------TCHHHHHHHHHHHHHHHHHHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHh------cCHHHHHHHHHHHHccHhHHHHHhccCC---CCcCHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999999999984 3689999999999999999999998764 257789999999999999999999953
No 7
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=99.95 E-value=5.7e-28 Score=224.02 Aligned_cols=145 Identities=19% Similarity=0.251 Sum_probs=130.6
Q ss_pred ccchhcccCCCCCcccccccCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhHHHHHHHHHHHHH
Q 008293 33 SSTLDPICKFTPHPDFCKANLPGNK---PGTVHDYGRYSVHQSLSVARKFQSLVDHYRKLPSTSYLSTIRALEDCSLLAG 109 (571)
Q Consensus 33 ~~~V~~~C~~T~yp~lC~ssL~s~~---~~dp~~L~~~av~~a~~~a~~a~~~i~~ll~~~~~~d~~~k~AL~DC~ely~ 109 (571)
+..|+.+|++|+||++|+++|.+.+ .++|++|++++|++++.+++.+...+++++... .+++.+.||+||.|+|+
T Consensus 3 ~~~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~ 80 (153)
T 1xg2_B 3 NHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQA--TDPKLKGRYETCSENYA 80 (153)
T ss_dssp CHHHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHH
Confidence 3578999999999999999998754 479999999999999999999999999987543 48999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCccccChhhHHHHHHHHhhhHHHHHhhhcCCccchhhhHhhhhhhhhHHHHHHHHHHhhhcc
Q 008293 110 MNVDSLSHASNTINSTNTLHSLQADDLHTLLSALLTNQQTCLDGLLETASASRITQALLAPLQNGAKFYSISLALVIHG 188 (571)
Q Consensus 110 daid~L~~S~~~l~~~~~~~~~~~~Dv~twLSAAlT~q~TC~DgF~e~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~~ 188 (571)
+++++|++++.+|+. .+++|+++||||||+|++||+|||.+.+ .++++|...+.++.+|+||+|||++.+
T Consensus 81 ~a~~~L~~a~~~l~~------~~~~d~~t~lSaAlt~~~tC~dgf~~~~---~~~~~l~~~~~~~~~l~s~aLai~~~l 150 (153)
T 1xg2_B 81 DAIDSLGQAKQFLTS------GDYNSLNIYASAAFDGAGTCEDSFEGPP---NIPTQLHQADLKLEDLCDIVLVISNLL 150 (153)
T ss_dssp HHHHHHHHHHHHHHH------TCHHHHHHHHHHHHHHHHHHHHHCCSSS---CCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh------CCHHHHHHHHHHHhcccchHHHHhccCC---CCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999984 3689999999999999999999998764 246789999999999999999999953
No 8
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=99.94 E-value=6.7e-27 Score=216.57 Aligned_cols=143 Identities=14% Similarity=0.160 Sum_probs=126.9
Q ss_pred CccchhcccCCCCCcccccccCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhHHHHHHHHHHHH
Q 008293 32 FSSTLDPICKFTPHPDFCKANLPGN---KPGTVHDYGRYSVHQSLSVARKFQSLVDHYRKLPSTSYLSTIRALEDCSLLA 108 (571)
Q Consensus 32 ~~~~V~~~C~~T~yp~lC~ssL~s~---~~~dp~~L~~~av~~a~~~a~~a~~~i~~ll~~~~~~d~~~k~AL~DC~ely 108 (571)
.+..|+.+|++|+||++|+++|.+. ..+||++|++++|++++.+++.+...+.+++... .+++.+.||+||.|+|
T Consensus 3 ~~~~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~--~~~~~~~al~dC~e~y 80 (150)
T 2cj4_A 3 MNNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSN--PPAAWKGPLKNCAFSY 80 (150)
T ss_dssp -CHHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCGGGHHHHHHHHHHH
T ss_pred chHHHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHH
Confidence 4578999999999999999999875 3569999999999999999999999999987543 3789999999999999
Q ss_pred HHHH-HHHHHHHHHHhccCCccccChhhHHHHHHHHhhhHHHHHhhhcCCccchhhhHhhhhhhhhHHHHHHHHHHhhhc
Q 008293 109 GMNV-DSLSHASNTINSTNTLHSLQADDLHTLLSALLTNQQTCLDGLLETASASRITQALLAPLQNGAKFYSISLALVIH 187 (571)
Q Consensus 109 ~dai-d~L~~S~~~l~~~~~~~~~~~~Dv~twLSAAlT~q~TC~DgF~e~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~ 187 (571)
++++ ++|++++..|+. .+++|+++|||+|++|++||+|||.+. +++|...+.++.+|+||+|||++.
T Consensus 81 ~~a~~~~L~~a~~~l~~------~~~~~~~t~lsaAlt~~~tC~dgf~~~------~~pl~~~~~~~~~l~s~aLaii~~ 148 (150)
T 2cj4_A 81 KVILTASLPEAIEALTK------GDPKFAEDGMVGSSGDAQECEEYFKGS------KSPFSALNIAVHELSDVGRAIVRN 148 (150)
T ss_dssp HHHHHTHHHHHHHHHHH------SCHHHHHHHHHHHHHHHHHHHHTTTTS------CCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc------CCHHHHHHHHHHHHHHHHHHHHhhCCC------CCccHHHHHHHHHHHHHHHHHHHh
Confidence 9999 799999999984 468999999999999999999999732 235888899999999999999985
Q ss_pred c
Q 008293 188 G 188 (571)
Q Consensus 188 ~ 188 (571)
+
T Consensus 149 l 149 (150)
T 2cj4_A 149 L 149 (150)
T ss_dssp T
T ss_pred h
Confidence 4
No 9
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.63 E-value=1.1e-14 Score=155.29 Aligned_cols=141 Identities=20% Similarity=0.212 Sum_probs=111.4
Q ss_pred ccceEEEcCCCC----C-----CcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEe--------eeEEeeccC---cceE
Q 008293 252 VDQMVVVNPNGT----A-----DYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYE--------EYVSIPKQK---KNLM 311 (571)
Q Consensus 252 ~~~~~~V~~dg~----g-----~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~--------E~v~i~~~~---~~it 311 (571)
...++.|+++|+ | .| |||+|+++|+++ ++|+|++|+|+ |.|.+.++. .+|+
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~pG--------dtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIt 83 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVNPG--------ELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIY 83 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCCTT--------CEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEE
T ss_pred CccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCCCC--------CEEEECCCeEccccccccceeEEecCCCCCCCCEE
Confidence 456899998875 4 69 999999999887 69999999999 678887643 5799
Q ss_pred EeecCCCceEEeccccccCCcccccceeEEEEcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccce-ee
Q 008293 312 MIGAGKGLTVITGNRSYVDGWTTFNTATFAVVGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDT-LY 390 (571)
Q Consensus 312 l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDT-l~ 390 (571)
|.|++.++++|.+.. ..+.....+..|.|.++++++++|+|+|+..+ +|++.+++..|++|+|.+.+|+ |+
T Consensus 84 i~~~~g~~~vI~~~~--~~g~~~~~~~~i~i~~~~~~i~gl~I~n~g~~------GI~v~gs~~~i~n~~i~~n~~~GI~ 155 (400)
T 1ru4_A 84 VAAANCGRAVFDFSF--PDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQ------GAYVIGSHNTFENTAFHHNRNTGLE 155 (400)
T ss_dssp EEEGGGCCEEEECCC--CTTCCCTTCCSEEECSSCEEEESEEEESCSSC------SEEECSSSCEEESCEEESCSSCSEE
T ss_pred EEEecCCCCEEeCCc--cCCccccceeEEEEECCeEEEEeEEEEeCCCC------cEEEeCCCcEEEeEEEECCCceeEE
Confidence 999988899998321 11111111356899999999999999998642 6788889999999999999994 88
Q ss_pred ccCC--ceeeeecEEeeccce
Q 008293 391 AHSL--RQFYRDCDIYGTIDF 409 (571)
Q Consensus 391 ~~~~--r~~~~~c~I~G~vDf 409 (571)
+... +..+++|+|+++.|.
T Consensus 156 l~~~~s~n~I~nn~i~~N~d~ 176 (400)
T 1ru4_A 156 INNGGSYNTVINSDAYRNYDP 176 (400)
T ss_dssp ECTTCCSCEEESCEEECCCCT
T ss_pred EEcccCCeEEEceEEEcccCc
Confidence 7753 567788888887764
No 10
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.41 E-value=1.4e-12 Score=142.53 Aligned_cols=147 Identities=18% Similarity=0.271 Sum_probs=114.5
Q ss_pred eEEEcCCCCCCcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEee-eEEeecc---CcceEEeecCCCceEEeccccccC
Q 008293 255 MVVVNPNGTADYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEE-YVSIPKQ---KKNLMMIGAGKGLTVITGNRSYVD 330 (571)
Q Consensus 255 ~~~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E-~v~i~~~---~~~itl~G~g~~~tiI~~~~~~~~ 330 (571)
++.|+ ++.+||+||++|+++ ++|+|++|+|+| .|.|.++ ..+|||.|++.++++|.|.
T Consensus 25 ~i~V~-----~~~~Lq~Ai~~A~pG--------DtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~----- 86 (506)
T 1dbg_A 25 GQVVA-----SNETLYQVVKEVKPG--------GLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD----- 86 (506)
T ss_dssp -CEEC-----SHHHHHHHHHHCCTT--------CEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES-----
T ss_pred EEEeC-----CHHHHHHHHHhCCCC--------CEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC-----
Confidence 45776 368999999999998 799999999998 7888432 2479999997778999875
Q ss_pred CcccccceeEEEEcCcEEEEEeEeecCCCCCc----cceeeeecCCCceEEEeceeecccce--eecc---------CCc
Q 008293 331 GWTTFNTATFAVVGQGFVAVNITFRNTAGPTK----HQAVAVRNGADKSTFYSCSFEGYQDT--LYAH---------SLR 395 (571)
Q Consensus 331 g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~----~qAvAl~~~~d~~~~~~c~~~g~QDT--l~~~---------~~r 395 (571)
.+|.|.++++++++|+|+|..+... ....++.+.|+++.|.+|+|.++|++ +|++ ..+
T Consensus 87 -------~~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~ 159 (506)
T 1dbg_A 87 -------AKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQH 159 (506)
T ss_dssp -------CEEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCS
T ss_pred -------ceEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEcCCCCceeeEeecccceeeeccc
Confidence 3789999999999999999865321 11234556689999999999999999 7774 346
Q ss_pred eeeeecEEeeccce---eecc---------------ceEEEeeceeeec
Q 008293 396 QFYRDCDIYGTIDF---IFGN---------------AAVVFQNCNMYPR 426 (571)
Q Consensus 396 ~~~~~c~I~G~vDf---IfG~---------------~~avf~~c~i~~~ 426 (571)
..+++|+|+|..+. +-|+ ...++++|.|..+
T Consensus 160 n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~ 208 (506)
T 1dbg_A 160 CRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNP 208 (506)
T ss_dssp CEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEEC
T ss_pred cEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEccc
Confidence 78999999997553 2221 3568899988865
No 11
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.57 E-value=1.6e-07 Score=98.82 Aligned_cols=136 Identities=15% Similarity=0.134 Sum_probs=88.8
Q ss_pred EEEEEeceEEe--eeEEeeccCcceEEeecCCCceE---EeccccccC-----Cc--------ccccceeEEEEc-----
Q 008293 288 YLIYVAAGVYE--EYVSIPKQKKNLMMIGAGKGLTV---ITGNRSYVD-----GW--------TTFNTATFAVVG----- 344 (571)
Q Consensus 288 ~~I~I~~G~Y~--E~v~i~~~~~~itl~G~g~~~ti---I~~~~~~~~-----g~--------~t~~sat~~v~~----- 344 (571)
.+|+|.||+|+ ++|.|+| |+|||.|++. .++ |.++-.... +. .-...+.|.|++
T Consensus 58 dvI~L~~G~Y~l~g~ivIdk--p~LtL~G~~~-g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r 134 (410)
T 2inu_A 58 AAIIIPPGDYDLHTQVVVDV--SYLTIAGFGH-GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPR 134 (410)
T ss_dssp EEEECCSEEEEECSCEEECC--TTEEEECSCC-CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSC
T ss_pred CEEEECCCeeccCCcEEEec--CcEEEEecCC-CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcc
Confidence 89999999997 8999975 5799999874 333 663311100 00 011346677777
Q ss_pred -CcEEEEEeEeecC-----CCCCccceeeeecC--CCceEEEeceeecccceeeccCCce-eeeecEEee--ccceeecc
Q 008293 345 -QGFVAVNITFRNT-----AGPTKHQAVAVRNG--ADKSTFYSCSFEGYQDTLYAHSLRQ-FYRDCDIYG--TIDFIFGN 413 (571)
Q Consensus 345 -~~f~~~~lt~~Nt-----~g~~~~qAvAl~~~--~d~~~~~~c~~~g~QDTl~~~~~r~-~~~~c~I~G--~vDfIfG~ 413 (571)
+++++++++|++. ......+-.++++. +|++.+.+|+|.+....++++.... -.+++.|.+ +-=-.||.
T Consensus 135 ~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~ 214 (410)
T 2inu_A 135 LSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIAECGNCVELTGA 214 (410)
T ss_dssp EECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEESSSEEEEECSC
T ss_pred cCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEEecCCceeeccc
Confidence 5555555555555 44344666788876 7899999999999999999997643 456666662 11113553
Q ss_pred c-eEEEeeceeeec
Q 008293 414 A-AVVFQNCNMYPR 426 (571)
Q Consensus 414 ~-~avf~~c~i~~~ 426 (571)
+ ...++++.+...
T Consensus 215 ~~~~~I~~N~i~~~ 228 (410)
T 2inu_A 215 GQATIVSGNHMGAG 228 (410)
T ss_dssp EESCEEESCEEECC
T ss_pred cccceEecceeeec
Confidence 3 346667777653
No 12
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.24 E-value=3.2e-05 Score=81.01 Aligned_cols=52 Identities=33% Similarity=0.435 Sum_probs=40.9
Q ss_pred CcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEee---------eEEeeccCcceEEeecCCCceEEecc
Q 008293 265 DYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEE---------YVSIPKQKKNLMMIGAGKGLTVITGN 325 (571)
Q Consensus 265 ~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E---------~v~i~~~~~~itl~G~g~~~tiI~~~ 325 (571)
+-..||+||++|... +..+|+|.||+|.. .+.++ .+|+|+|+|++.++|...
T Consensus 18 dt~aiq~Ai~~a~~~------gg~~v~~p~G~y~~~~~~~~~~g~l~~~---~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 18 DRASIQAAIDAAYAA------GGGTVYLPAGEYRVSAAGEPGDGCLMLK---DGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CHHHHHHHHHHHHHT------TSEEEEECSEEEEECCCSSGGGCSEECC---TTEEEEESSBTTEEEEEC
T ss_pred hHHHHHHHHHHHHhc------CCCEEEECCeEEEEcccccCCcccEEec---CCeEEEEcCCCCcEEEec
Confidence 457899999998753 12799999999996 57764 489999999887877543
No 13
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=97.83 E-value=0.0005 Score=77.47 Aligned_cols=149 Identities=17% Similarity=0.254 Sum_probs=94.2
Q ss_pred cccHHHHHHhCcCCCC---CCCCCeEEEEEeceEEe--eeEEeeccCcceEEeecCCCceEEeccccccCCcc-----cc
Q 008293 266 YTTISDAVAAAPNSTD---SSSNGYYLIYVAAGVYE--EYVSIPKQKKNLMMIGAGKGLTVITGNRSYVDGWT-----TF 335 (571)
Q Consensus 266 f~TIq~Ai~aap~~~~---~~~~~r~~I~I~~G~Y~--E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g~~-----t~ 335 (571)
=.-||+||+++..... .+...+.+|||.+|+|. ..|.++. ++.|+|++.+.++|....+.. |.. .+
T Consensus 66 T~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~~---~t~L~G~~~~~pvIka~~~F~-G~~li~~d~y 141 (758)
T 3eqn_A 66 TAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLY---QTQLIGDAKNLPTLLAAPNFS-GIALIDADPY 141 (758)
T ss_dssp HHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECCT---TEEEEECSSSCCEEEECTTCC-SSCSEESSCB
T ss_pred HHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEccC---CeEEEecCCCCCeEecCCCCC-Ccceeecccc
Confidence 3569999999854210 00134579999999998 4677754 899999999888886544321 110 00
Q ss_pred --cceeEEEEc--CcEEEEEeEeecCCCCCccceeeeecC-CCceEEEeceeec-----c-cceeeccCC-ceeeeecEE
Q 008293 336 --NTATFAVVG--QGFVAVNITFRNTAGPTKHQAVAVRNG-ADKSTFYSCSFEG-----Y-QDTLYAHSL-RQFYRDCDI 403 (571)
Q Consensus 336 --~sat~~v~~--~~f~~~~lt~~Nt~g~~~~qAvAl~~~-~d~~~~~~c~~~g-----~-QDTl~~~~~-r~~~~~c~I 403 (571)
...-..+.. -...++||.|..+..+.. +.+|+.. +....+.||.|.. . |+.|+...| .-+..||+|
T Consensus 142 ~~~G~~w~~~~~~F~r~irNlviD~t~~~~~--~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f 219 (758)
T 3eqn_A 142 LAGGAQYYVNQNNFFRSVRNFVIDLRQVSGS--ATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVF 219 (758)
T ss_dssp CGGGCBSSCGGGCCCEEEEEEEEECTTCSSC--EEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEE
T ss_pred CCCCccccccccceeeeecceEEeccccCCC--ceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEE
Confidence 000000000 134688888887776543 7777754 6778888999885 2 778887653 457888888
Q ss_pred ee-ccceeeccceEEEee
Q 008293 404 YG-TIDFIFGNAAVVFQN 420 (571)
Q Consensus 404 ~G-~vDfIfG~~~avf~~ 420 (571)
.| .+-+.+|+-+-.+.|
T Consensus 220 ~GG~~G~~~gnQQfT~rn 237 (758)
T 3eqn_A 220 NGGNIGATFGNQQFTVRN 237 (758)
T ss_dssp ESCSEEEEEECSCCEEEE
T ss_pred eCCceEEEcCCcceEEec
Confidence 84 666666764433333
No 14
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.39 E-value=0.007 Score=63.60 Aligned_cols=110 Identities=10% Similarity=0.108 Sum_probs=70.6
Q ss_pred eeEEEE-cCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeec-----ccceeeccCC-ceeeeecEEeecccee
Q 008293 338 ATFAVV-GQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEG-----YQDTLYAHSL-RQFYRDCDIYGTIDFI 410 (571)
Q Consensus 338 at~~v~-~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g-----~QDTl~~~~~-r~~~~~c~I~G~vDfI 410 (571)
..|.+. .+++.++||+|+|+.. ..+- ....+.+.+.++++.+ .-|.+-.... ....++|+|...-|-|
T Consensus 152 ~~i~~~~~~nv~I~~iti~nsp~----~~i~-~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcI 226 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLINSPN----FHVV-FSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNV 226 (376)
T ss_dssp CSEEEESCEEEEEEEEEEECCSS----CSEE-EESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSE
T ss_pred eEEEEEcceEEEEEeEEEECCCc----EEEE-EeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeE
Confidence 345554 6789999999999753 1122 2357889999999987 3566665543 4467889988666644
Q ss_pred e--------ccceEEEeeceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecC
Q 008293 411 F--------GNAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAAD 461 (571)
Q Consensus 411 f--------G~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 461 (571)
. +....+++||.+..- .| |.. |.... .-..+.|+||+|....
T Consensus 227 aiks~~~~~~s~nI~I~n~~~~~g------hG-isi-GSe~~-~v~nV~v~n~~~~~t~ 276 (376)
T 1bhe_A 227 AIKAYKGRAETRNISILHNDFGTG------HG-MSI-GSETM-GVYNVTVDDLKMNGTT 276 (376)
T ss_dssp EEEECTTSCCEEEEEEEEEEECSS------SC-EEE-EEEES-SEEEEEEEEEEEESCS
T ss_pred EEcccCCCCCceEEEEEeeEEEcc------cc-EEe-ccCCc-cEeeEEEEeeEEeCCC
Confidence 3 234678888888631 12 332 22111 3457889999998764
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.39 E-value=0.0086 Score=66.32 Aligned_cols=172 Identities=19% Similarity=0.224 Sum_probs=99.0
Q ss_pred ccHHHHHHhCcCCCCCCCCCeEEEEEeceEEee--eEEeeccCcceEEeecCCCceEEecccc-----------------
Q 008293 267 TTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEE--YVSIPKQKKNLMMIGAGKGLTVITGNRS----------------- 327 (571)
Q Consensus 267 ~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E--~v~i~~~~~~itl~G~g~~~tiI~~~~~----------------- 327 (571)
.-||+||++. -+|+|.+|+|.- .|.++ .+++|.|++...++|.....
T Consensus 40 ~Aiq~Ai~~G-----------g~V~iP~GtYlis~~l~l~---snv~L~g~g~~~t~L~~~~~~p~~~~li~~lI~a~~~ 105 (609)
T 3gq8_A 40 RAFEKAIESG-----------FPVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGN 105 (609)
T ss_dssp HHHHHHHHTS-----------SCEEECSEEEEESSCEEEC---SSEEEEESCTTTEEEEECTTCCSSCCSEEESCTTTCC
T ss_pred HHHHHHHHcC-----------CEEEECCccEEEeCceEEC---CCcEEEEeeCCCCEEEeCCCCCCCCceeeeeeeeccc
Confidence 4599999962 279999999984 57775 37999998866566653211
Q ss_pred --------ccCC----cc-------cccceeEEE-EcCcEEEEEeEeecCCCCC------------ccceeeeecCCCce
Q 008293 328 --------YVDG----WT-------TFNTATFAV-VGQGFVAVNITFRNTAGPT------------KHQAVAVRNGADKS 375 (571)
Q Consensus 328 --------~~~g----~~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~------------~~qAvAl~~~~d~~ 375 (571)
..|| ++ ..+.-.|.+ ..+++.++||+|+|+.... ..+.+.+.+...++
T Consensus 106 ~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV 185 (609)
T 3gq8_A 106 ENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENI 185 (609)
T ss_dssp EEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEE
T ss_pred ccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeE
Confidence 0111 00 011112223 3467899999999985410 00111122225778
Q ss_pred EEEeceeeccc-ceeeccCCc-eeeeecEEeec------cceeecc--ceEEEeeceeeecCCCCCCceeEEecCCCCCC
Q 008293 376 TFYSCSFEGYQ-DTLYAHSLR-QFYRDCDIYGT------IDFIFGN--AAVVFQNCNMYPRRPLDNQFNAITAQGRTDPN 445 (571)
Q Consensus 376 ~~~~c~~~g~Q-DTl~~~~~r-~~~~~c~I~G~------vDfIfG~--~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~ 445 (571)
.++||.|.+.+ |-+.+++.+ -.+++|+++|. --+-+|. ..+.|+||.+.... ..-.|-++++ ..
T Consensus 186 ~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~----~GIrIKt~~~--~~ 259 (609)
T 3gq8_A 186 WIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCY----GGIEIKAHGD--AP 259 (609)
T ss_dssp EEESCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSS----EEEEEEECTT--SC
T ss_pred EEEeeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCC----CEEEEEecCC--CC
Confidence 99999997754 555555443 37889998543 2333444 36788889886321 0112444332 23
Q ss_pred CCeEEEEEcCEEe
Q 008293 446 QNTGISIHNCTIK 458 (571)
Q Consensus 446 ~~~G~vf~~c~i~ 458 (571)
....+.|.+|...
T Consensus 260 ~v~NV~I~n~vs~ 272 (609)
T 3gq8_A 260 AAYNISINGHMSV 272 (609)
T ss_dssp CCEEEEEEEEEEE
T ss_pred ccccEEEECCEee
Confidence 4556666666543
No 16
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.38 E-value=0.0028 Score=65.97 Aligned_cols=100 Identities=9% Similarity=0.101 Sum_probs=68.2
Q ss_pred ccHHHHHHhCcCCCCCCCCCeEEEEEeceEEe--eeEEeeccCcceEEeecCCCceEEeccccccCCcccccceeEEE-E
Q 008293 267 TTISDAVAAAPNSTDSSSNGYYLIYVAAGVYE--EYVSIPKQKKNLMMIGAGKGLTVITGNRSYVDGWTTFNTATFAV-V 343 (571)
Q Consensus 267 ~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~--E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~ 343 (571)
.|+++||.+..+ +.+|+...|+++ +.|.|. .++||.|.|. ...|.|.. .-+.+ .
T Consensus 56 GsLr~av~~~~P--------~~Ivf~~~g~I~l~~~l~V~---sn~TI~G~ga-~~~i~G~G-----------~gi~i~~ 112 (346)
T 1pxz_A 56 GTLRYGATREKA--------LWIIFSQNMNIKLKMPLYVA---GHKTIDGRGA-DVHLGNGG-----------PCLFMRK 112 (346)
T ss_dssp TSHHHHHHCSSC--------EEEEESSCEEECCSSCEECC---SSEEEECTTS-CEEEETTS-----------CCEEEES
T ss_pred chhHHHhccCCC--------eEEEEcCCcEEecCccEEec---CCeEEEccCC-ceEEeCCc-----------ceEEEEc
Confidence 479999997433 477777889997 677774 3899999875 45667631 12333 5
Q ss_pred cCcEEEEEeEeecCCCC------------------CccceeeeecCCCceEEEeceeecccceee
Q 008293 344 GQGFVAVNITFRNTAGP------------------TKHQAVAVRNGADKSTFYSCSFEGYQDTLY 390 (571)
Q Consensus 344 ~~~f~~~~lt~~Nt~g~------------------~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~ 390 (571)
+++++++||+|++.... ....|+-+. .+.++.+.+|.|....|.++
T Consensus 113 a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~-~s~nVwIDHcs~s~~~Dg~i 176 (346)
T 1pxz_A 113 VSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLI 176 (346)
T ss_dssp CEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSSEEE
T ss_pred cCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe-cCceEEEEeeEEecCCCCcE
Confidence 78999999999986310 122334443 46778888998887666554
No 17
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.18 E-value=0.0056 Score=65.93 Aligned_cols=142 Identities=7% Similarity=0.067 Sum_probs=88.7
Q ss_pred eEEE-EcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeec---ccceeeccCC-ceeeeecEEeeccceee--
Q 008293 339 TFAV-VGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEG---YQDTLYAHSL-RQFYRDCDIYGTIDFIF-- 411 (571)
Q Consensus 339 t~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g---~QDTl~~~~~-r~~~~~c~I~G~vDfIf-- 411 (571)
.+.+ ..+++.+++|+|+|+..- .+- -...+++.+.++.+.+ .-|.+-.... ....++|+|.-.-|=|.
T Consensus 192 ~i~~~~~~nv~i~giti~nsp~~----~i~-~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaik 266 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINSPMW----CIH-PVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIK 266 (448)
T ss_dssp SEEEESCEEEEEESCEEESCSSC----SEE-EESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEB
T ss_pred EEEEEcccceEEEeeEEEeCCCc----eEe-eeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEec
Confidence 3444 478899999999998532 122 2367889999999997 5777777654 44788999987666432
Q ss_pred -c-----------cceEEEeeceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecCCccccccccceEeecccc
Q 008293 412 -G-----------NAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAADDLANSINATQTYLGRPWK 479 (571)
Q Consensus 412 -G-----------~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~ 479 (571)
| ....+++||.+.... + .+.|.. |......-..+.|+||++.+..... ..++.-||. .
T Consensus 267 sg~~~dg~~~~~ps~nI~I~n~~~~~~~---g-h~gisi-GS~~~~~v~nV~v~n~~~~~t~~Gi----rIKt~~g~g-G 336 (448)
T 3jur_A 267 SGRDADGRRIGVPSEYILVRDNLVISQA---S-HGGLVI-GSEMSGGVRNVVARNNVYMNVERAL----RLKTNSRRG-G 336 (448)
T ss_dssp CCCHHHHHHHCCCEEEEEEESCEEECSS---C-SEEEEE-CSSCTTCEEEEEEESCEEESCSEEE----EEECCTTTC-S
T ss_pred cCccccccccCCCceeEEEEEeEEecCC---C-cceEEE-CCcccCcEEEEEEEEEEEecccceE----EEEEEcCCC-c
Confidence 2 235788999985432 1 234555 4333344567899999997653210 112333443 3
Q ss_pred CCCcEEEeccCCCCcc
Q 008293 480 EYSRTVYMQSFMDSLI 495 (571)
Q Consensus 480 ~~s~~v~~~s~l~~~i 495 (571)
....+.|-+..|.++-
T Consensus 337 ~v~nI~f~ni~m~~v~ 352 (448)
T 3jur_A 337 YMENIFFIDNVAVNVS 352 (448)
T ss_dssp EEEEEEEESCEEEEES
T ss_pred eEeeEEEEEEEEECCc
Confidence 3346777777776543
No 18
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.12 E-value=0.01 Score=62.07 Aligned_cols=69 Identities=14% Similarity=0.031 Sum_probs=49.2
Q ss_pred eEEE--EcCcEEEEEeEeecCCCC--CccceeeeecCCCceEEEeceeecccceeecc----CCceeeeecEEeeccc
Q 008293 339 TFAV--VGQGFVAVNITFRNTAGP--TKHQAVAVRNGADKSTFYSCSFEGYQDTLYAH----SLRQFYRDCDIYGTID 408 (571)
Q Consensus 339 t~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~----~~r~~~~~c~I~G~vD 408 (571)
-|.| .+++++++||+|++.... ....|+-+. .++++.+.+|+|....|-++.. +.+.=..+|+|.+.-|
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~ 201 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSD 201 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCS
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCcc
Confidence 4677 579999999999986421 234566665 5789999999999888877631 2233467888887644
No 19
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.09 E-value=0.019 Score=64.90 Aligned_cols=144 Identities=18% Similarity=0.260 Sum_probs=86.2
Q ss_pred ccHHHHHHhCcCCCCCCCCCeEEEEEeceEEee--eEEeeccCcceEEeecCCCceEEecccc-----------------
Q 008293 267 TTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEE--YVSIPKQKKNLMMIGAGKGLTVITGNRS----------------- 327 (571)
Q Consensus 267 ~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E--~v~i~~~~~~itl~G~g~~~tiI~~~~~----------------- 327 (571)
.-||+||++. -+|+|.+|+|.- .|.++. +++|.|++...++|.....
T Consensus 40 ~Aiq~Ai~aG-----------g~V~IPaGtYlisg~I~L~s---nv~L~Geg~~~t~Lk~~~d~p~~~~li~~lI~a~gv 105 (772)
T 3gqn_A 40 RAFEKAIESG-----------FPVYVPYGTFMVSRGIKLPS---NTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGN 105 (772)
T ss_dssp HHHHHHHHTT-----------SCEEECSEEEEESSCEEECS---SCEEEEEEEEEEEEEECTTCCSSCCSEEESCTTTCC
T ss_pred HHHHHHHHcC-----------CEEEECCccEEEEeEEEECC---CcEEEEecCCCCEEEeCCCCCCCCceeeeeeeccCc
Confidence 5699999962 279999999985 577753 7888887744444432211
Q ss_pred --------ccCC----cc-------cccceeEEE-EcCcEEEEEeEeecCCCC-------C-----ccceeeeecCCCce
Q 008293 328 --------YVDG----WT-------TFNTATFAV-VGQGFVAVNITFRNTAGP-------T-----KHQAVAVRNGADKS 375 (571)
Q Consensus 328 --------~~~g----~~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~-------~-----~~qAvAl~~~~d~~ 375 (571)
..|| ++ ..+...|.+ ..+++.++||+|+|+... . ..+.+.+.+.+.++
T Consensus 106 eNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV 185 (772)
T 3gqn_A 106 ENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENI 185 (772)
T ss_dssp EEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEE
T ss_pred eeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceE
Confidence 0112 00 011112333 456799999999998541 0 01111122235778
Q ss_pred EEEeceeecccc-eeeccCCc-eeeeecEEeec------cceeecc--ceEEEeeceee
Q 008293 376 TFYSCSFEGYQD-TLYAHSLR-QFYRDCDIYGT------IDFIFGN--AAVVFQNCNMY 424 (571)
Q Consensus 376 ~~~~c~~~g~QD-Tl~~~~~r-~~~~~c~I~G~------vDfIfG~--~~avf~~c~i~ 424 (571)
.+.||.|.+.+| -+.+++.. -.+++|++.|. .-+-.|. ..+.|+||.|.
T Consensus 186 ~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~ 244 (772)
T 3gqn_A 186 WIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSK 244 (772)
T ss_dssp EEESCEEESCSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEE
T ss_pred EEEeeEEEecCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEE
Confidence 999999977654 55555443 37889999543 2344444 36789999886
No 20
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.02 E-value=0.0059 Score=63.33 Aligned_cols=201 Identities=16% Similarity=0.148 Sum_probs=109.5
Q ss_pred cccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeE-EeeccCcceEEeecCC-----------------CceEEeccc-
Q 008293 266 YTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYV-SIPKQKKNLMMIGAGK-----------------GLTVITGNR- 326 (571)
Q Consensus 266 f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v-~i~~~~~~itl~G~g~-----------------~~tiI~~~~- 326 (571)
...||+|++++... +.-+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|..
T Consensus 8 t~aiq~ai~~c~~~------~g~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~g 77 (339)
T 2iq7_A 8 AAAAIKGKASCTSI------ILNGIVVPAGTTLD-MTGL---KSGTTVTFQGKTTFGYKEWEGPLISFSGTNININGASG 77 (339)
T ss_dssp HHHHHHHGGGCSEE------EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTT
T ss_pred HHHHHHHHHHhhcc------CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcccEEEEcCCC
Confidence 45699999988652 12578888888863 2 22 12344443320 223334421
Q ss_pred cccCCcc------------cccceeEEE-EcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeeccc-------
Q 008293 327 SYVDGWT------------TFNTATFAV-VGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQ------- 386 (571)
Q Consensus 327 ~~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~Q------- 386 (571)
...||.+ ..+...+.+ ..+++.+++|+|+|+.. ..+-+ ...+++.+.+|.+.+..
T Consensus 78 G~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~----~~i~i-~~~~nv~i~~~~I~~~~~d~~~~~ 152 (339)
T 2iq7_A 78 HSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV----QAFSI-NSATTLGVYDVIIDNSAGDSAGGH 152 (339)
T ss_dssp CEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS----CCEEE-ESCEEEEEESCEEECGGGGGTTCC
T ss_pred CEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc----ceEEE-eccCCEEEEEEEEECCccccccCC
Confidence 1112211 112234555 57889999999999853 22222 25788999999998753
Q ss_pred --ceeeccC-CceeeeecEEeecccee-ecc-ceEEEeeceeeecCCCCCCceeEEe--cCCCCCCCCeEEEEEcCEEee
Q 008293 387 --DTLYAHS-LRQFYRDCDIYGTIDFI-FGN-AAVVFQNCNMYPRRPLDNQFNAITA--QGRTDPNQNTGISIHNCTIKA 459 (571)
Q Consensus 387 --DTl~~~~-~r~~~~~c~I~G~vDfI-fG~-~~avf~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~ 459 (571)
|.+.... .....++|+|.-.-|-| ++. ...+|+||.+... .+ |.. .|......-..+.|+||++..
T Consensus 153 ntDGid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~g------hG-isiGSlg~~~~~~v~nV~v~n~~~~~ 225 (339)
T 2iq7_A 153 NTDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGG------HG-LSIGSVGGRSDNTVKTVTISNSKIVN 225 (339)
T ss_dssp SCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESS------CC-EEEEEESSSSCCEEEEEEEEEEEEES
T ss_pred CCCcEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEECC------ce-EEECcCCcccCCCEEEEEEEeeEEEC
Confidence 3444433 24467888887544422 232 4677888888641 12 333 122223334567899999987
Q ss_pred cCCccccccccceEeeccccCCCcEEEeccCCCC
Q 008293 460 ADDLANSINATQTYLGRPWKEYSRTVYMQSFMDS 493 (571)
Q Consensus 460 ~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~l~~ 493 (571)
.... ...++.-||. .....+.|-+-.|.+
T Consensus 226 ~~~g----irIkt~~g~~-G~v~nI~~~ni~~~~ 254 (339)
T 2iq7_A 226 SDNG----VRIKTVSGAT-GSVSGVTYSGITLSN 254 (339)
T ss_dssp CSEE----EEEEEETTCC-CEEEEEEEEEEEEEE
T ss_pred CCcE----EEEEEeCCCC-eEEEEEEEEeEEccC
Confidence 5421 0112332331 223456666666654
No 21
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=96.96 E-value=0.011 Score=61.49 Aligned_cols=137 Identities=12% Similarity=0.141 Sum_probs=80.2
Q ss_pred eEEE-E--cCcEEEEEeEeecCCCCCccceeeeec-CCCceEEEeceeeccc-----------------ceeeccC-Cce
Q 008293 339 TFAV-V--GQGFVAVNITFRNTAGPTKHQAVAVRN-GADKSTFYSCSFEGYQ-----------------DTLYAHS-LRQ 396 (571)
Q Consensus 339 t~~v-~--~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g~Q-----------------DTl~~~~-~r~ 396 (571)
.|.+ . .+++.+++|+|+|+.. . .+.+ ..+++.+.++.+.+.. |.+.... ...
T Consensus 104 ~i~~~~~~~~nv~I~giti~nsp~----~--~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV 177 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNWPV----H--CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHV 177 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECCSS----E--EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEE
T ss_pred EEEEeecCcCcEEEEEEEEEcCCC----c--eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEE
Confidence 5666 5 4589999999999852 2 3333 5788999999998742 3344433 244
Q ss_pred eeeecEEeecccee-ec-cceEEEeeceeeecCCCCCCceeEEec--CCCCCCCCeEEEEEcCEEeecCCccccccccce
Q 008293 397 FYRDCDIYGTIDFI-FG-NAAVVFQNCNMYPRRPLDNQFNAITAQ--GRTDPNQNTGISIHNCTIKAADDLANSINATQT 472 (571)
Q Consensus 397 ~~~~c~I~G~vDfI-fG-~~~avf~~c~i~~~~~~~~~~~~itA~--gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~ 472 (571)
..++|+|...-|-| ++ ....+|+||.+... .| |..- |..+...-..+.|+||+|....... ..++
T Consensus 178 ~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g------hG-isiGS~G~~~~~~v~nV~v~n~~~~~~~~Gi----rIKt 246 (349)
T 1hg8_A 178 TLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGG------HG-LSIGSVGGKSDNVVDGVQFLSSQVVNSQNGC----RIKS 246 (349)
T ss_dssp EEEEEEEECSSCSEEESSEEEEEEEEEEEESS------CC-EEEEEESSSSCCEEEEEEEEEEEEEEEEEEE----EEEE
T ss_pred EEEeeEEecCCCeEEeeCCeEEEEEeEEEeCC------cc-eEEccccccccCCEEEEEEEEEEEECCCcEE----EEEe
Confidence 67899997544432 22 24678899988631 12 4431 2222234457889999998754210 1122
Q ss_pred EeeccccCCCcEEEeccCCCC
Q 008293 473 YLGRPWKEYSRTVYMQSFMDS 493 (571)
Q Consensus 473 yLGRpW~~~s~~v~~~s~l~~ 493 (571)
.-|| ......+.|-+-.|.+
T Consensus 247 ~~g~-~G~v~nI~~~ni~~~~ 266 (349)
T 1hg8_A 247 NSGA-TGTINNVTYQNIALTN 266 (349)
T ss_dssp ETTC-CEEEEEEEEEEEEEEE
T ss_pred cCCC-CccccceEEEEEEEEc
Confidence 2222 1223456666666654
No 22
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=96.81 E-value=0.029 Score=60.54 Aligned_cols=178 Identities=11% Similarity=0.057 Sum_probs=95.7
Q ss_pred CcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEe-eeEEeeccCcceEEeecC-------------------------CC
Q 008293 265 DYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYE-EYVSIPKQKKNLMMIGAG-------------------------KG 318 (571)
Q Consensus 265 ~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~-E~v~i~~~~~~itl~G~g-------------------------~~ 318 (571)
+=.-||+||+++.... +.-+|+|.+|+|. ..|.++ .+++|..++ ..
T Consensus 38 dT~Aiq~Aidac~~~~-----ggg~V~vP~GtYl~g~I~lk---s~v~L~l~~GatL~~s~~td~~~y~~~~~~~~~~~~ 109 (464)
T 1h80_A 38 DSNALQRAINAISRKP-----NGGTLLIPNGTYHFLGIQMK---SNVHIRVESDVIIKPTWNGDGKNHRLFEVGVNNIVR 109 (464)
T ss_dssp CHHHHHHHHHHHHTST-----TCEEEEECSSEEEECSEECC---TTEEEEECTTCEEEECCCTTCSCEEEEEESSSSCEE
T ss_pred hHHHHHHHHHHHhhcc-----CCcEEEECCCeEEEeeEecc---CceEEEEcCCcEEEeccCCCcccCCceEeecccCcc
Confidence 3467999999884320 1268999999995 344442 245554442 11
Q ss_pred ceEEecccc--ccCCccc--ccceeEEE-EcCcEEEEEeEeecCCCCCcccee--------eeecCCCceEEEeceeecc
Q 008293 319 LTVITGNRS--YVDGWTT--FNTATFAV-VGQGFVAVNITFRNTAGPTKHQAV--------AVRNGADKSTFYSCSFEGY 385 (571)
Q Consensus 319 ~tiI~~~~~--~~~g~~t--~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAv--------Al~~~~d~~~~~~c~~~g~ 385 (571)
.+.|+|... .-||.+. .+...|.+ ...++.++||+|+|... -+... ++.+...++.+.||.|.+.
T Consensus 110 nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~--ih~s~~V~i~NtDGi~i~s~nV~I~n~~I~~g 187 (464)
T 1h80_A 110 NFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKT--IFASILVDVTERNGRLHWSRNGIIERIKQNNA 187 (464)
T ss_dssp EEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSC--BSCSEEECEEEETTEEEEEEEEEEEEEEEESC
T ss_pred ceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccce--EeeceeeeeecCCCceeeccCEEEeceEEecC
Confidence 112232210 0111110 11122333 36789999999999543 12111 1133567888999999988
Q ss_pred cceee-cc--C-CceeeeecEEeec--cceeec-----------cceEEEeeceeeecCCCCCCceeEEecCCCCCCCCe
Q 008293 386 QDTLY-AH--S-LRQFYRDCDIYGT--IDFIFG-----------NAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNT 448 (571)
Q Consensus 386 QDTl~-~~--~-~r~~~~~c~I~G~--vDfIfG-----------~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~ 448 (571)
.|++- .+ . ....+++|++.|. +.+--| -....|+||++.... +.|..... ...-.
T Consensus 188 ddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~------~~I~I~p~--~~~is 259 (464)
T 1h80_A 188 LFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGL------AAVMFGPH--FMKNG 259 (464)
T ss_dssp CTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSS------EEEEEECT--TCBCC
T ss_pred CCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCc------eeEEEeCC--CceEe
Confidence 77763 11 1 2347889987761 001111 124578888887432 22333211 12235
Q ss_pred EEEEEcCEEeec
Q 008293 449 GISIHNCTIKAA 460 (571)
Q Consensus 449 G~vf~~c~i~~~ 460 (571)
.+.|+|.+.+..
T Consensus 260 nItfeNI~~t~~ 271 (464)
T 1h80_A 260 DVQVTNVSSVSC 271 (464)
T ss_dssp CEEEEEEEEESS
T ss_pred EEEEEEEEEEcc
Confidence 688888887764
No 23
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.80 E-value=0.0078 Score=62.31 Aligned_cols=138 Identities=14% Similarity=0.187 Sum_probs=82.2
Q ss_pred eEEE-EcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecc---------cceeeccCC-ceeeeecEEeecc
Q 008293 339 TFAV-VGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGY---------QDTLYAHSL-RQFYRDCDIYGTI 407 (571)
Q Consensus 339 t~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~---------QDTl~~~~~-r~~~~~c~I~G~v 407 (571)
.+.+ ..+++.++||+|+|+.. ..+-+. .+++.+.+|.+.+. -|.+..... ....++|+|.-.-
T Consensus 102 ~i~~~~~~nv~i~~i~i~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gD 175 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNTPV----QAISVQ--ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQD 175 (336)
T ss_dssp CEEEEEEEEEEEESCEEECCSS----CCEEEE--EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSS
T ss_pred EEEEeeeCcEEEEEEEEEeCCc----cEEEEE--eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCC
Confidence 4555 57889999999999852 334554 88999999999975 345555443 4468899987544
Q ss_pred cee-ecc-ceEEEeeceeeecCCCCCCceeEEe--cCCCCCCCCeEEEEEcCEEeecCCccccccccceEeeccccCCCc
Q 008293 408 DFI-FGN-AAVVFQNCNMYPRRPLDNQFNAITA--QGRTDPNQNTGISIHNCTIKAADDLANSINATQTYLGRPWKEYSR 483 (571)
Q Consensus 408 DfI-fG~-~~avf~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~ 483 (571)
|-| ++. ...+|+||.+..- .+ |.. .|......-..+.|+||++....... ..++.-||. .....
T Consensus 176 Dciaiksg~nI~i~n~~~~~g------hG-isiGS~g~~~~~~v~nV~v~n~~~~~t~~gi----rIkt~~g~~-G~v~n 243 (336)
T 1nhc_A 176 DCIAINSGESISFTGGTCSGG------HG-LSIGSVGGRDDNTVKNVTISDSTVSNSANGV----RIKTIYKET-GDVSE 243 (336)
T ss_dssp EEEEESSEEEEEEESCEEESS------SE-EEEEEESSSSCCEEEEEEEEEEEEESCSEEE----EEEEETTCC-CEEEE
T ss_pred CEEEEeCCeEEEEEeEEEECC------cC-ceEccCccccCCCEEEEEEEeeEEECCCcEE----EEEEECCCC-CEEee
Confidence 432 222 4677888887631 12 443 12112233457789999998754210 112222321 22345
Q ss_pred EEEeccCCCCc
Q 008293 484 TVYMQSFMDSL 494 (571)
Q Consensus 484 ~v~~~s~l~~~ 494 (571)
+.|-+-.|.++
T Consensus 244 I~~~ni~~~~v 254 (336)
T 1nhc_A 244 ITYSNIQLSGI 254 (336)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEeeEEeecc
Confidence 66666666543
No 24
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=96.77 E-value=0.016 Score=61.80 Aligned_cols=144 Identities=13% Similarity=0.188 Sum_probs=84.2
Q ss_pred cccHHHHHHhCcCCCCCCCCCeEEEEEeceEEee--eEEeeccCcceEEeecCC-------Cc--eE-Eeccc-------
Q 008293 266 YTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEE--YVSIPKQKKNLMMIGAGK-------GL--TV-ITGNR------- 326 (571)
Q Consensus 266 f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E--~v~i~~~~~~itl~G~g~-------~~--ti-I~~~~------- 326 (571)
=.-||+||+++..+ -+|+|.+|+|.- .|.+.. ..+++|..+|. .. .. +....
T Consensus 37 T~Aiq~Ai~ac~~g--------~~V~vP~G~Yli~~~l~l~g-~s~v~l~l~G~~l~~~~~~~~~~~~~~~~~~~~i~i~ 107 (422)
T 1rmg_A 37 GPAITSAWAACKSG--------GLVYIPSGNYALNTWVTLTG-GSATAIQLDGIIYRTGTASGNMIAVTDTTDFELFSST 107 (422)
T ss_dssp HHHHHHHHHHHTBT--------CEEEECSSEEEECSCEEEES-CEEEEEEECSEEEECCCCSSEEEEEEEEEEEEEECSS
T ss_pred HHHHHHHHHHCCCC--------CEEEECCCeEEeCCceeecC-CCeEEEEEcCcEEcccCCCCceEEEEecCceeEEeec
Confidence 35699999988643 489999999985 266652 24676665541 00 01 11110
Q ss_pred --cccCCcc-------cccceeEEE-EcCcEEEEEeEeecCCCCCccceeeeec-CCCceEEEeceeec----ccceeec
Q 008293 327 --SYVDGWT-------TFNTATFAV-VGQGFVAVNITFRNTAGPTKHQAVAVRN-GADKSTFYSCSFEG----YQDTLYA 391 (571)
Q Consensus 327 --~~~~g~~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g----~QDTl~~ 391 (571)
...||.+ .++...+.+ ..+++.++||+|+|+.. . .+.+ ..+++.++||.|.+ .-|.+..
T Consensus 108 G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~nsp~----~--~i~i~~~~nv~I~n~~I~~~d~~ntDGidi 181 (422)
T 1rmg_A 108 SKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDAPA----F--HFTMDTCSDGEVYNMAIRGGNEGGLDGIDV 181 (422)
T ss_dssp SCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECCSS----C--SEEEEEEEEEEEEEEEEECCSSTTCCSEEE
T ss_pred cCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECCCc----e--EEEEeCcCCEEEEeEEEECCCCCCCccEee
Confidence 0111211 113334444 57889999999999743 1 2332 45678888888876 4566655
Q ss_pred cCCceeeeecEEeeccceee---ccceEEEeeceee
Q 008293 392 HSLRQFYRDCDIYGTIDFIF---GNAAVVFQNCNMY 424 (571)
Q Consensus 392 ~~~r~~~~~c~I~G~vDfIf---G~~~avf~~c~i~ 424 (571)
.......++|+|...-|=|. |....+++||.+.
T Consensus 182 ~~~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~ 217 (422)
T 1rmg_A 182 WGSNIWVHDVEVTNKDECVTVKSPANNILVESIYCN 217 (422)
T ss_dssp EEEEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEE
T ss_pred cCCeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEc
Confidence 55233567888875545332 3456677888753
No 25
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.74 E-value=0.0077 Score=62.27 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=81.2
Q ss_pred ccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeee---------------EEeeccCcceEEeecCCCceEEeccccccCC
Q 008293 267 TTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEY---------------VSIPKQKKNLMMIGAGKGLTVITGNRSYVDG 331 (571)
Q Consensus 267 ~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~---------------v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g 331 (571)
..+++||+..+.. ++.+|.+ .|++.-. +.|.- .+|+||+|... .|.|
T Consensus 24 ~~L~~al~~~~~~------~p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v-~sn~TI~G~~a---~i~g------- 85 (330)
T 2qy1_A 24 EAMQSAIDSYSGS------GGLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKN-KSDVTIKGANG---SAAN------- 85 (330)
T ss_dssp HHHHHHHHHSCSS------SCEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEES-CCSEEEEECTT---CBBS-------
T ss_pred HHHHHHHhccCCC------CCEEEEE-ccEEecccccccccccccccceeEEEc-CCCeEEECCCc---EEee-------
Confidence 3678899875432 2467766 6776532 23321 35677766441 1222
Q ss_pred cccccceeEEEE--cCcEEEEEeEeecCCCCCccceeeeec----CCCceEEEeceeecccceeeccCCceeeeecEEee
Q 008293 332 WTTFNTATFAVV--GQGFVAVNITFRNTAGPTKHQAVAVRN----GADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYG 405 (571)
Q Consensus 332 ~~t~~sat~~v~--~~~f~~~~lt~~Nt~g~~~~qAvAl~~----~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G 405 (571)
.-|.+. +++++++||+|++-.......|+-+.. .++++-+.+|.|..--|. ....++++| .|
T Consensus 86 ------~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~-~~~~~~~~~-----Dg 153 (330)
T 2qy1_A 86 ------FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTK-CSGAGDASF-----DG 153 (330)
T ss_dssp ------SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCC-CTTCTTCSS-----CC
T ss_pred ------eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccc-cccCCccee-----ec
Confidence 246665 789999999999764322356666664 589999999999633222 123456665 46
Q ss_pred ccceeeccceEEEeeceeee
Q 008293 406 TIDFIFGNAAVVFQNCNMYP 425 (571)
Q Consensus 406 ~vDfIfG~~~avf~~c~i~~ 425 (571)
.+|..-|.-..-+++|.|+.
T Consensus 154 ~idi~~~s~~VTISnn~f~~ 173 (330)
T 2qy1_A 154 GIDMKKGVHHVTVSYNYVYN 173 (330)
T ss_dssp SEEEESSCEEEEEESCEEEE
T ss_pred ccccccCcceEEEEcceecc
Confidence 67776666677788888863
No 26
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=96.67 E-value=0.028 Score=62.83 Aligned_cols=108 Identities=14% Similarity=0.008 Sum_probs=58.2
Q ss_pred EEEE-cCcEEEEEeEeecCCCCCccceeeee-cCCCceEEEeceeec----ccceeeccCC-ceeeeecEEeecccee-e
Q 008293 340 FAVV-GQGFVAVNITFRNTAGPTKHQAVAVR-NGADKSTFYSCSFEG----YQDTLYAHSL-RQFYRDCDIYGTIDFI-F 411 (571)
Q Consensus 340 ~~v~-~~~f~~~~lt~~Nt~g~~~~qAvAl~-~~~d~~~~~~c~~~g----~QDTl~~~~~-r~~~~~c~I~G~vDfI-f 411 (571)
|.+. .+++.++||+|+|+..- .+. ...+++.+.++.+.. +-|.+..... ....++|+|.-.-|-| +
T Consensus 334 i~~~~~~nv~I~giti~ns~~~------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iai 407 (608)
T 2uvf_A 334 MTLRGVENVYLAGFTVRNPAFH------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINF 407 (608)
T ss_dssp EEEESEEEEEEESCEEECCSSC------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeeeeEEEeCcEEecCCCC------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEe
Confidence 4443 67899999999987421 122 245666667766654 2455555433 3356677776544433 1
Q ss_pred --c----------cceEEEeeceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeec
Q 008293 412 --G----------NAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAA 460 (571)
Q Consensus 412 --G----------~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~ 460 (571)
| ....+++||.+... .+.+. -|......-..+.|+||+|.+.
T Consensus 408 ksg~~~~g~~~~~s~nI~I~n~~~~~g------hg~~~-iGS~~~~~v~nI~v~n~~~~~t 461 (608)
T 2uvf_A 408 AAGTGEKAQEQEPMKGAWLFNNYFRMG------HGAIV-TGSHTGAWIEDILAENNVMYLT 461 (608)
T ss_dssp ECCCSGGGGGSCCEEEEEEESCEECSS------SCSEE-EESCCTTCEEEEEEESCEEESC
T ss_pred cCCcCccccccccccCEEEEeEEEeCC------CCeEE-EcccCCCCEEEEEEEeEEEECC
Confidence 1 23556777766531 12222 2222222334567777777765
No 27
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.64 E-value=0.0097 Score=62.22 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=60.4
Q ss_pred EEeeccCcceEEeecCCCceEEeccccccCCcccccceeEEE--EcCcEEEEEeEeecCCCC--CccceeeeecCCCceE
Q 008293 301 VSIPKQKKNLMMIGAGKGLTVITGNRSYVDGWTTFNTATFAV--VGQGFVAVNITFRNTAGP--TKHQAVAVRNGADKST 376 (571)
Q Consensus 301 v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~~~~d~~~ 376 (571)
|.|. .|+||+|.|.+ ..|.|. -|.| .+++++++||+|++.... .++.|+-+. .++++.
T Consensus 104 l~v~---snkTI~G~G~~-~~i~G~-------------gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~-~s~nVw 165 (359)
T 1idk_A 104 ITVT---SNKSLIGEGSS-GAIKGK-------------GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLVW 165 (359)
T ss_dssp EEEC---SSEEEEECTTT-CEEESC-------------CEEECTTCEEEEEESCEEEEECTTEETSCCSEEEC-SCEEEE
T ss_pred EEeC---CCceEEEecCC-eEEecc-------------eEEEecCCCcEEEeCeEEEcccccccccCCceeec-CCCcEE
Confidence 5553 48899998753 445543 3666 578999999999984211 234556554 589999
Q ss_pred EEeceeecccceeecc----CCceeeeecEEeecc
Q 008293 377 FYSCSFEGYQDTLYAH----SLRQFYRDCDIYGTI 407 (571)
Q Consensus 377 ~~~c~~~g~QDTl~~~----~~r~~~~~c~I~G~v 407 (571)
+.+|+|...-|-++.. +...-..+|+|.|.-
T Consensus 166 IDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 166 IDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp EESCEEEEESSCSEEECCCTTCEEEEESCEEECBC
T ss_pred EEeeEeecCCCCcEEecccCcceEEEECcEecCCc
Confidence 9999999887877742 223346678887653
No 28
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.60 E-value=0.022 Score=59.53 Aligned_cols=173 Identities=14% Similarity=0.124 Sum_probs=103.1
Q ss_pred cccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeE-EeeccCcceEEeecCC-----------------CceEEecc-c
Q 008293 266 YTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYV-SIPKQKKNLMMIGAGK-----------------GLTVITGN-R 326 (571)
Q Consensus 266 f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v-~i~~~~~~itl~G~g~-----------------~~tiI~~~-~ 326 (571)
+..||+|++++... +.-+|+|.+|+|.. + .+. .+++|..+|. +.+.|+|. .
T Consensus 35 ~~aiq~ai~~c~~~------~g~~v~vP~G~~l~-l~~l~---~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~~ 104 (362)
T 1czf_A 35 AAAAKAGKAKCSTI------TLNNIEVPAGTTLD-LTGLT---SGTKVIFEGTTTFQYEEWAGPLISMSGEHITVTGASG 104 (362)
T ss_dssp HHHHHHHGGGCSEE------EEESCEECTTCCEE-ECSCC---TTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTT
T ss_pred HHHHHHHHHHhhcc------CCCEEEECCCEEEE-eeccC---CCeEEEEeCcEEeccccCCCcEEEEeCccEEEEcCCC
Confidence 56799999998642 12578899999863 2 221 2344443331 23344442 1
Q ss_pred cccCCcc-----------cccceeEEE-EcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecc---------
Q 008293 327 SYVDGWT-----------TFNTATFAV-VGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGY--------- 385 (571)
Q Consensus 327 ~~~~g~~-----------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~--------- 385 (571)
...||.+ ..+...+.+ ..+++.++||+|+|+.. ..+-+. .+++.+.+|.+.+.
T Consensus 105 g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~N 178 (362)
T 1czf_A 105 HLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ--ANDITFTDVTINNADGDTQGGHN 178 (362)
T ss_dssp CEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE--CSSEEEESCEEECGGGGTTTCCS
T ss_pred cEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe--eCCEEEEEEEEECCccccccCCC
Confidence 1122211 011223444 57889999999999843 335554 89999999999975
Q ss_pred cceeeccC-CceeeeecEEeecccee-ecc-ceEEEeeceeeecCCCCCCceeEEe--cCCCCCCCCeEEEEEcCEEeec
Q 008293 386 QDTLYAHS-LRQFYRDCDIYGTIDFI-FGN-AAVVFQNCNMYPRRPLDNQFNAITA--QGRTDPNQNTGISIHNCTIKAA 460 (571)
Q Consensus 386 QDTl~~~~-~r~~~~~c~I~G~vDfI-fG~-~~avf~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~ 460 (571)
-|.+-... .....++|+|...-|-| ++. ...+|+||.+... .| |.. .|+.+...-..+.|+||++...
T Consensus 179 tDGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g------hG-isiGS~G~~~~~~v~nV~v~n~~~~~t 251 (362)
T 1czf_A 179 TDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGG------HG-LSIGSVGDRSNNVVKNVTIEHSTVSNS 251 (362)
T ss_dssp CCSEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESS------CC-EEEEEECSSSCCEEEEEEEEEEEEEEE
T ss_pred CCceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCC------ce-eEEeeccccCCCCEEEEEEEeeEEECC
Confidence 34444443 24468899998665633 333 4678999988742 12 333 1322333445678999999875
Q ss_pred C
Q 008293 461 D 461 (571)
Q Consensus 461 ~ 461 (571)
.
T Consensus 252 ~ 252 (362)
T 1czf_A 252 E 252 (362)
T ss_dssp E
T ss_pred c
Confidence 4
No 29
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.47 E-value=0.043 Score=56.55 Aligned_cols=137 Identities=14% Similarity=0.227 Sum_probs=82.0
Q ss_pred ceEEEcCCCCCCcccHHHHHHh---CcCCCCCCCCCeEEEEEeceEEe------eeEEeec------cCcceEEeecCCC
Q 008293 254 QMVVVNPNGTADYTTISDAVAA---APNSTDSSSNGYYLIYVAAGVYE------EYVSIPK------QKKNLMMIGAGKG 318 (571)
Q Consensus 254 ~~~~V~~dg~g~f~TIq~Ai~a---ap~~~~~~~~~r~~I~I~~G~Y~------E~v~i~~------~~~~itl~G~g~~ 318 (571)
..++|.- ..-+++||.. .... +++.+|.| .|+-. +.|.|.. ..+++||+|.|.+
T Consensus 21 ~vv~Vtt-----l~dL~~Al~~~~~~~~~-----~~p~iI~V-~G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~ 89 (326)
T 3vmv_A 21 RVEYAST-----GAQIQQLIDNRSRSNNP-----DEPLTIYV-NGTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTN 89 (326)
T ss_dssp EEEEESS-----HHHHHHHHHHHHHSSCT-----TSCEEEEE-CSEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTC
T ss_pred eEEEECC-----HHHHHHHHhhcccccCC-----CCCEEEEE-eeEEecCCCCCceEEEecccccccCCCCeEEEecCCC
Confidence 4555653 2337888873 1111 23467765 46654 4677741 1158999998853
Q ss_pred ceEEeccccccCCcccccceeEEE-EcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCcee
Q 008293 319 LTVITGNRSYVDGWTTFNTATFAV-VGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQF 397 (571)
Q Consensus 319 ~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~ 397 (571)
..|.|. -|.+ .+++++++||+|++... ....|+-+.-.++++-+.+|.|..-.+ -..+.++
T Consensus 90 -~~i~G~-------------gl~i~~a~NVIIrNl~i~~~~~-~~~DaI~i~~~s~nVWIDH~s~s~~~~---g~~~~~~ 151 (326)
T 3vmv_A 90 -GEFDGI-------------GIRLSNAHNIIIQNVSIHHVRE-GEGTAIEVTDDSKNVWIDHNEFYSEFP---GNGDSDY 151 (326)
T ss_dssp -CEEESC-------------CEEEESEEEEEEESCEEECCCS-TTSCSEEEETTCEEEEEESCEEECCSS---TTSCTTS
T ss_pred -eEEeCc-------------EEEEEecceEEEECeEEEcCCC-CCCCeEEEecCCCcEEEEeeEEecccc---CCcCccc
Confidence 444443 2444 68899999999998752 245666665457899999999973210 0111122
Q ss_pred eeecEEeeccceeeccceEEEeeceee
Q 008293 398 YRDCDIYGTIDFIFGNAAVVFQNCNMY 424 (571)
Q Consensus 398 ~~~c~I~G~vDfIfG~~~avf~~c~i~ 424 (571)
+ .|.+|..-|.-..-+++|.|.
T Consensus 152 ~-----Dgl~di~~~s~~VTISnn~f~ 173 (326)
T 3vmv_A 152 Y-----DGLVDMKRNAEYITVSWNKFE 173 (326)
T ss_dssp S-----CCSEEECTTCEEEEEESCEEE
T ss_pred c-----CcceEecCCCceEEEEceEEe
Confidence 2 255566555555667777776
No 30
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.43 E-value=0.12 Score=53.75 Aligned_cols=129 Identities=14% Similarity=0.208 Sum_probs=76.7
Q ss_pred cceEEeecCCCceEEeccccccCCcccccceeEEE-EcCcEEEEEeEeecCCC--C---------CccceeeeecCCCce
Q 008293 308 KNLMMIGAGKGLTVITGNRSYVDGWTTFNTATFAV-VGQGFVAVNITFRNTAG--P---------TKHQAVAVRNGADKS 375 (571)
Q Consensus 308 ~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g--~---------~~~qAvAl~~~~d~~ 375 (571)
+|+||+|.|. ...|.|. -|.+ .+++++++||+|++... | ....|+-+ ..+.++
T Consensus 80 sn~TI~G~G~-~~~i~g~-------------gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i-~~s~nV 144 (355)
T 1pcl_A 80 SNTTIIGVGS-NGKFTNG-------------SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVI-DNSTNV 144 (355)
T ss_pred CCeEEEEecC-CeEEecC-------------EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEe-cCCCcE
Confidence 5899999875 4455543 3444 57899999999998631 1 12344444 257899
Q ss_pred EEEeceeecccce---eeccCCceeeeecEEeeccceeeccceEEEeeceeeecCCCCCCceeEEecCCCCCC-----CC
Q 008293 376 TFYSCSFEGYQDT---LYAHSLRQFYRDCDIYGTIDFIFGNAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPN-----QN 447 (571)
Q Consensus 376 ~~~~c~~~g~QDT---l~~~~~r~~~~~c~I~G~vDfIfG~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~-----~~ 447 (571)
-+.+|.|..-.|. +-...||++. .-.|.+|+.-|...+-+++|.|.... +..+. |..+.. ..
T Consensus 145 WIDH~s~s~~~~~d~~~~~~~G~~~~---~~Dgl~Di~~~s~~VTiS~n~f~~h~-----k~~Li--G~sd~~~~~d~g~ 214 (355)
T 1pcl_A 145 WVDHVTISDGSFTDDKYTTKDGEKYV---QHDGALDIKKGSDYVTISYSRFELHD-----KTILI--GHSDSNGSQDSGK 214 (355)
T ss_pred EEEeeEEeccccCccccccccCcccc---ccccceeeecCCCcEEEEeeEEcCCC-----ceEEe--CCCCCCcccccCc
Confidence 9999999854222 1112245432 11356676656667779999997421 22222 333221 12
Q ss_pred eEEEEEcCEEeecC
Q 008293 448 TGISIHNCTIKAAD 461 (571)
Q Consensus 448 ~G~vf~~c~i~~~~ 461 (571)
..+.|++|.|....
T Consensus 215 ~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 215 LRVTFHNNVFDRVT 228 (355)
T ss_pred ceEEEECcEEeCCc
Confidence 34778888886443
No 31
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=96.33 E-value=0.023 Score=59.27 Aligned_cols=137 Identities=12% Similarity=0.073 Sum_probs=81.8
Q ss_pred cccHHHHHHhCcCCCCC----CCCCeEEEEEeceEE------------------eeeEEeeccCcceEEeecCCCceEEe
Q 008293 266 YTTISDAVAAAPNSTDS----SSNGYYLIYVAAGVY------------------EEYVSIPKQKKNLMMIGAGKGLTVIT 323 (571)
Q Consensus 266 f~TIq~Ai~aap~~~~~----~~~~r~~I~I~~G~Y------------------~E~v~i~~~~~~itl~G~g~~~tiI~ 323 (571)
..++++||+++..+... +.+++.+|.| .|+- ...+.|....+++||+|.+. . |.
T Consensus 26 ~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v-~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~--~-~~ 101 (353)
T 1air_A 26 MQDIVNIIDAARLDANGKKVKGGAYPLVITY-TGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANG--S-SA 101 (353)
T ss_dssp HHHHHHHHHHTTBCTTSCBCTBCSSCEEEEE-CCCCHHHHHHHHTSGGGSTTSCCCEEEEESBCSCEEEEECTT--C-CB
T ss_pred HHHHHHHHHhhccccccccccCCCceEEEEE-ccEEeccccccccccccccccCCCceEEEecCCCEEEEeccC--C-CC
Confidence 56889999887532110 0234577777 5652 13566643345888888631 1 11
Q ss_pred ccccccCCcccccceeEEE-EcCcEEEEEeEeecCCCC-CccceeeeecCCCceEEEeceeecccceeec-cCCceeeee
Q 008293 324 GNRSYVDGWTTFNTATFAV-VGQGFVAVNITFRNTAGP-TKHQAVAVRNGADKSTFYSCSFEGYQDTLYA-HSLRQFYRD 400 (571)
Q Consensus 324 ~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g~-~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~-~~~r~~~~~ 400 (571)
| ..|.+ .+++++++||+|++..+. ....|+-+. .++++-+.+|.|..-+|.... ..+++.|
T Consensus 102 -------g------~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~-~s~nVWIDH~s~s~~~~~~~g~~~~~~~~-- 165 (353)
T 1air_A 102 -------N------FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDNDTTF-- 165 (353)
T ss_dssp -------S------SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEE-SCCSEEEESCEEECCSCCCTTCGGGCCSS--
T ss_pred -------C------ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEee-CCCcEEEEeeEEecCCccccccccccccc--
Confidence 1 13444 568999999999975321 124555554 679999999999876543221 1122222
Q ss_pred cEEeeccceeeccceEEEeeceeee
Q 008293 401 CDIYGTIDFIFGNAAVVFQNCNMYP 425 (571)
Q Consensus 401 c~I~G~vDfIfG~~~avf~~c~i~~ 425 (571)
.|.+|+.-|...+-+++|.|..
T Consensus 166 ---DGl~di~~~s~~VTISnn~f~~ 187 (353)
T 1air_A 166 ---ESAVDIKGASNTVTVSYNYIHG 187 (353)
T ss_dssp ---CCSEEEESSCCEEEEESCEEEE
T ss_pred ---ccceeeecccCcEEEEeeEEcC
Confidence 2566777666677788888863
No 32
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=96.24 E-value=0.053 Score=56.09 Aligned_cols=202 Identities=15% Similarity=0.177 Sum_probs=113.8
Q ss_pred cccHHHHHHhCcCCCCCCCCCeEEEEEeceEEeeeE-EeeccCcceEEeecCC-----------------CceEEeccc-
Q 008293 266 YTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYEEYV-SIPKQKKNLMMIGAGK-----------------GLTVITGNR- 326 (571)
Q Consensus 266 f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~E~v-~i~~~~~~itl~G~g~-----------------~~tiI~~~~- 326 (571)
+..||+|++++... +.-+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|..
T Consensus 12 ~~aiq~ai~~c~~~------gg~~v~vP~G~~l~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~g 81 (339)
T 1ia5_A 12 ASSASKSKTSCSTI------VLSNVAVPSGTTLD-LTKL---NDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGASG 81 (339)
T ss_dssp HHHHHHHGGGCSEE------EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTT
T ss_pred hHHHHHHHHHhhcc------CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcCcEEEEcCCC
Confidence 56799999998652 12578899999863 2 22 22444444331 123333321
Q ss_pred cccCCcc------------cccceeEEE-EcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecc--------
Q 008293 327 SYVDGWT------------TFNTATFAV-VGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGY-------- 385 (571)
Q Consensus 327 ~~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~-------- 385 (571)
...||.+ ..+...+.+ ..+++.++||+|+|+.. ..+-+ ...+++.+.+|.+.+.
T Consensus 82 G~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i-~~~~nv~i~~~~I~~~~~d~~~~~ 156 (339)
T 1ia5_A 82 HSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV----QVFSV-AGSDYLTLKDITIDNSDGDDNGGH 156 (339)
T ss_dssp CEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEE-ESCEEEEEESCEEECGGGTTTTCC
T ss_pred eEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc----ceEEE-ecccCeEEeeEEEECCccccccCC
Confidence 1112211 112224555 57889999999999853 22332 3578899999999975
Q ss_pred -cceeeccC-CceeeeecEEeecccee-ecc-ceEEEeeceeeecCCCCCCceeEEe--cCCCCCCCCeEEEEEcCEEee
Q 008293 386 -QDTLYAHS-LRQFYRDCDIYGTIDFI-FGN-AAVVFQNCNMYPRRPLDNQFNAITA--QGRTDPNQNTGISIHNCTIKA 459 (571)
Q Consensus 386 -QDTl~~~~-~r~~~~~c~I~G~vDfI-fG~-~~avf~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~ 459 (571)
-|.+.... .....++|+|.-.-|-| ++. ...+|+||.+... .+ |.. .|......-..+.|+||+|..
T Consensus 157 ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g------hG-isiGS~g~~~~~~v~nV~v~n~~~~~ 229 (339)
T 1ia5_A 157 NTDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGG------HG-LSIGSVGGRSDNTVKNVTFVDSTIIN 229 (339)
T ss_dssp SCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESS------SC-EEEEEECSSSCCEEEEEEEEEEEEES
T ss_pred CCCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECC------ce-EEECcCCcccCCCEEEEEEEeeEEEC
Confidence 34455543 34468899997544432 222 4678899988731 12 433 121222334577899999987
Q ss_pred cCCccccccccceEeeccccCCCcEEEeccCCCCc
Q 008293 460 ADDLANSINATQTYLGRPWKEYSRTVYMQSFMDSL 494 (571)
Q Consensus 460 ~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~l~~~ 494 (571)
..... ..+++-||+ .....+.|-+-.|.++
T Consensus 230 t~~gi----rIKt~~g~~-G~v~nI~~~ni~~~~v 259 (339)
T 1ia5_A 230 SDNGV----RIKTNIDTT-GSVSDVTYKDITLTSI 259 (339)
T ss_dssp CSEEE----EEEEETTCC-CEEEEEEEEEEEEEEE
T ss_pred CCcEE----EEEEeCCCC-cEEEeeEEEEEEEECc
Confidence 54210 122333331 2245677777777643
No 33
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.21 E-value=0.023 Score=58.82 Aligned_cols=85 Identities=18% Similarity=0.251 Sum_probs=59.6
Q ss_pred eEEEEEeceEEe----eeEEeeccCcceEEeecCCCceEEeccccccCCcccccceeEEE-EcCcEEEEEeEeecCCC--
Q 008293 287 YYLIYVAAGVYE----EYVSIPKQKKNLMMIGAGKGLTVITGNRSYVDGWTTFNTATFAV-VGQGFVAVNITFRNTAG-- 359 (571)
Q Consensus 287 r~~I~I~~G~Y~----E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g-- 359 (571)
+.+|.| .|+.. ..|.|. +|+||.|.+.. .|.|. -|.+ .+++++++||+|++...
T Consensus 47 PriIvv-~G~I~~~~~~~l~v~---snkTI~G~ga~--~I~G~-------------Gi~I~~a~NVIIrnl~i~~~~~~~ 107 (340)
T 3zsc_A 47 KYVIVV-DGTIVFEPKREIKVL---SDKTIVGINDA--KIVGG-------------GLVIKDAQNVIIRNIHFEGFYMED 107 (340)
T ss_dssp CEEEEE-EEEEEEEEEEEEEEC---SSEEEEEEEEE--EEEEE-------------EEEEESCEEEEEESCEEECCCCTT
T ss_pred CEEEEE-CcEEEeCCcceEEec---CCCEEEeccCc--EEecC-------------ceEEEcCceEEEeCeEEECCcccc
Confidence 456665 68876 456663 58999999865 56653 2444 47899999999998631
Q ss_pred -C----CccceeeeecCCCceEEEeceeecccceeec
Q 008293 360 -P----TKHQAVAVRNGADKSTFYSCSFEGYQDTLYA 391 (571)
Q Consensus 360 -~----~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~ 391 (571)
+ ....|+-+. .+.++-+.+|.|....|.++.
T Consensus 108 ~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~id 143 (340)
T 3zsc_A 108 DPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVD 143 (340)
T ss_dssp CTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEE
T ss_pred CccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceE
Confidence 1 134556654 478999999999987776555
No 34
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.99 E-value=0.04 Score=56.60 Aligned_cols=114 Identities=15% Similarity=0.199 Sum_probs=80.6
Q ss_pred ceeEEEEcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCceeeeecEEeec------ccee
Q 008293 337 TATFAVVGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYGT------IDFI 410 (571)
Q Consensus 337 sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G~------vDfI 410 (571)
...+.|.++...++|..|... |- .|++.+.+..|++|.|+|.-|-+|- .+..+|.+|.|.-. -.+|
T Consensus 114 AvAl~v~~d~~~f~~c~f~g~------QD-TLy~~~~r~~~~~c~I~G~vDFIfG-~~~a~f~~c~i~~~~~~~~~~~~i 185 (319)
T 1gq8_A 114 AVALRVGSDLSAFYRCDILAY------QD-SLYVHSNRQFFINCFIAGTVDFIFG-NAAVVLQDCDIHARRPGSGQKNMV 185 (319)
T ss_dssp CCSEEECCTTEEEEEEEEECS------TT-CEEECSSEEEEESCEEEESSSCEEE-SCEEEEESCEEEECCCSTTCCEEE
T ss_pred eEEEEecCCcEEEEEeEECcc------ce-eeeecCccEEEEecEEEeeeeEEec-CCcEEEEeeEEEEecCCCCCceEE
Confidence 356778999999999999843 43 5778888899999999999999995 47899999999842 3466
Q ss_pred eccc--------eEEEeeceeeecCCCCCC-ceeEEecCCCCCCCCeEEEEEcCEEee
Q 008293 411 FGNA--------AVVFQNCNMYPRRPLDNQ-FNAITAQGRTDPNQNTGISIHNCTIKA 459 (571)
Q Consensus 411 fG~~--------~avf~~c~i~~~~~~~~~-~~~itA~gr~~~~~~~G~vf~~c~i~~ 459 (571)
.-.+ --+|++|+|......... ...-+--||.-. ...-.||.+|.+..
T Consensus 186 tA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~-~~sr~v~~~t~~~~ 242 (319)
T 1gq8_A 186 TAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWK-EYSRTVVMQSSITN 242 (319)
T ss_dssp EEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSS-TTCEEEEESCEECT
T ss_pred EeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCC-CcceEEEEeccCCC
Confidence 6543 348999999864321100 001223467432 23458999999864
No 35
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=95.94 E-value=0.043 Score=57.36 Aligned_cols=119 Identities=16% Similarity=0.219 Sum_probs=74.1
Q ss_pred CeEEEEEeceEEe----------------eeEEeeccCcceEEeecCCCceEEeccccccCCcccccceeEEE----EcC
Q 008293 286 GYYLIYVAAGVYE----------------EYVSIPKQKKNLMMIGAGKGLTVITGNRSYVDGWTTFNTATFAV----VGQ 345 (571)
Q Consensus 286 ~r~~I~I~~G~Y~----------------E~v~i~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v----~~~ 345 (571)
++.+|.| .|+.. .+|.| ..|+||+|.|.+ ..|.|. -|.| .++
T Consensus 53 ~p~vI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v---~snkTI~G~G~~-~~i~g~-------------gl~i~~~~~~~ 114 (361)
T 1pe9_A 53 EAKIIQI-KGTIDISGGTPYTDFADQKARSQINI---PANTTVIGLGTD-AKFING-------------SLIIDGTDGTN 114 (361)
T ss_dssp SCEEEEE-CSEEETTTTCCCCSHHHHHHHSEEEC---CSSEEEEECTTC-CEEESS-------------EEEEEGGGTCE
T ss_pred CcEEEEE-CCEEecCCccccccccccccceeEEe---cCCcEEEccCCC-eEEecC-------------EEEEecCCCCc
Confidence 3567766 56664 24555 358999998754 444442 3666 468
Q ss_pred cEEEEEeEeecCCC--C---------CccceeeeecCCCceEEEeceeecccceeec---cCCceeeeecEEeeccceee
Q 008293 346 GFVAVNITFRNTAG--P---------TKHQAVAVRNGADKSTFYSCSFEGYQDTLYA---HSLRQFYRDCDIYGTIDFIF 411 (571)
Q Consensus 346 ~f~~~~lt~~Nt~g--~---------~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~---~~~r~~~~~c~I~G~vDfIf 411 (571)
+++++||+|++... | ....|+-|.-.+.++-+.+|.|..-.|.=-. ..||++. .-.|.+|+.-
T Consensus 115 NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~---~~DgllDi~~ 191 (361)
T 1pe9_A 115 NVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYV---QHDGALDIKR 191 (361)
T ss_dssp EEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECC---CCCCSEEECT
T ss_pred eEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCccee---eccceeeeec
Confidence 99999999998642 1 1234455544478999999999854332100 1245542 1125667766
Q ss_pred ccceEEEeeceeee
Q 008293 412 GNAAVVFQNCNMYP 425 (571)
Q Consensus 412 G~~~avf~~c~i~~ 425 (571)
|...+-+.+|.|..
T Consensus 192 ~s~~VTiS~n~f~~ 205 (361)
T 1pe9_A 192 GSDYVTISNSLIDQ 205 (361)
T ss_dssp TCEEEEEESCEEEE
T ss_pred CCCcEEEEeeEEcC
Confidence 66677788888864
No 36
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.72 E-value=0.044 Score=56.28 Aligned_cols=114 Identities=11% Similarity=0.178 Sum_probs=80.4
Q ss_pred ceeEEEEcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCceeeeecEEee------cccee
Q 008293 337 TATFAVVGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYG------TIDFI 410 (571)
Q Consensus 337 sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G------~vDfI 410 (571)
...+.|.++...++|..|... |- .|++.+.+..|++|.|+|.-|-+|-. +..+|.+|.|.- .-.+|
T Consensus 110 AvAl~v~~d~~~f~~c~f~g~------QD-TLy~~~~r~~~~~c~I~G~vDFIfG~-~~avf~~c~i~~~~~~~~~~~~i 181 (317)
T 1xg2_A 110 AVALRVGADMSVINRCRIDAY------QD-TLYAHSQRQFYRDSYVTGTVDFIFGN-AAVVFQKCQLVARKPGKYQQNMV 181 (317)
T ss_dssp CCSEEECCTTEEEESCEEECS------TT-CEEECSSEEEEESCEEEESSSCEEEC-CEEEEESCEEEECCCSTTCCEEE
T ss_pred eEEEEEeCCcEEEEEeEeCcc------cc-ceeecCccEEEEeeEEEeceeEEcCC-ceEEEeeeEEEEeccCCCCccEE
Confidence 356778999999999999843 43 57788888999999999999999955 688999999974 23466
Q ss_pred eccc--------eEEEeeceeeecCCCCCC-ceeEEecCCCCCCCCeEEEEEcCEEee
Q 008293 411 FGNA--------AVVFQNCNMYPRRPLDNQ-FNAITAQGRTDPNQNTGISIHNCTIKA 459 (571)
Q Consensus 411 fG~~--------~avf~~c~i~~~~~~~~~-~~~itA~gr~~~~~~~G~vf~~c~i~~ 459 (571)
.-.+ --+|++|+|......... ...-+--||.-. ...-.||.+|.+..
T Consensus 182 tA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~-~~sr~v~~~t~~~~ 238 (317)
T 1xg2_A 182 TAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWK-EYSRTVVMESYLGG 238 (317)
T ss_dssp EEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSS-TTCEEEEESCEECT
T ss_pred EecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccC-CCceEEEEecccCC
Confidence 5443 358999999864321100 001223467432 23458999999874
No 37
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.65 E-value=0.057 Score=55.99 Aligned_cols=78 Identities=15% Similarity=0.351 Sum_probs=62.7
Q ss_pred EEEcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCceeeeecEEeecc----------cee
Q 008293 341 AVVGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYGTI----------DFI 410 (571)
Q Consensus 341 ~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G~v----------DfI 410 (571)
.+.++...+++..|.. .|- .|++.+.|..|++|.|+|.=|-+|-. ++.+|.+|.|.=.- -+|
T Consensus 136 ~v~~d~~~f~~c~f~G------~QD-TLy~~~gr~~~~~c~I~G~vDFIFG~-a~a~f~~c~i~~~~~~~~~~~~~~g~I 207 (342)
T 2nsp_A 136 TKSGDRAYFKDVSLVG------YQA-TLYVSGGRSFFSDCRISGTVDFIFGD-GTALFNNCDLVSRYRADVKSGNVSGYL 207 (342)
T ss_dssp CTTCBSEEEEEEEEEC------STT-CEEECSSEEEEESCEEEESEEEEEES-SEEEEESCEEEECCCTTSCTTSCCEEE
T ss_pred eeccCcEEEEeeEEec------ccc-eEEECCCCEEEEcCEEEeceEEEeCC-ceEEEecCEEEEecCcccccccCceEE
Confidence 5789999999999983 343 58888899999999999999988866 68999999997321 477
Q ss_pred eccc-------eEEEeeceeeec
Q 008293 411 FGNA-------AVVFQNCNMYPR 426 (571)
Q Consensus 411 fG~~-------~avf~~c~i~~~ 426 (571)
.-.+ --+|++|+|...
T Consensus 208 tA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 208 TAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EEECCBTTCSCCEEEESCEEEES
T ss_pred EccCCCCCCCCEEEEEcCEEecC
Confidence 6543 248999999864
No 38
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=95.26 E-value=0.12 Score=54.80 Aligned_cols=128 Identities=18% Similarity=0.310 Sum_probs=75.9
Q ss_pred CcceEEeecCCCceEEeccccccCCcccccceeEEEEcCcEEEEEeEeecCCC------C---------CccceeeeecC
Q 008293 307 KKNLMMIGAGKGLTVITGNRSYVDGWTTFNTATFAVVGQGFVAVNITFRNTAG------P---------TKHQAVAVRNG 371 (571)
Q Consensus 307 ~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g------~---------~~~qAvAl~~~ 371 (571)
.+|+||+|.|.+ ..|.|. -|.|.+++++++||+|++... | ....|+-+ ..
T Consensus 126 ~snkTI~G~G~~-~~i~g~-------------gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~ 190 (399)
T 2o04_A 126 PANTTIVGSGTN-AKVVGG-------------NFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITI-NG 190 (399)
T ss_dssp CSSEEEEESSSC-CEEESC-------------EEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEE-ES
T ss_pred CCCceEEeccCC-eEEeeC-------------EEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeEEe-cC
Confidence 458999999754 444442 477777899999999998632 1 11244444 35
Q ss_pred CCceEEEeceeecccce---eeccCCceeeeecEEeeccceeeccceEEEeeceeeecCCCCCCceeEEecCCCCCC---
Q 008293 372 ADKSTFYSCSFEGYQDT---LYAHSLRQFYRDCDIYGTIDFIFGNAAVVFQNCNMYPRRPLDNQFNAITAQGRTDPN--- 445 (571)
Q Consensus 372 ~d~~~~~~c~~~g~QDT---l~~~~~r~~~~~c~I~G~vDfIfG~~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~--- 445 (571)
+.++-+.+|.|.-..|. .-...||+|.. -.|.+|+.-|...+-+++|.|.... ++.+. |..+..
T Consensus 191 s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~---~Dgl~Di~~~s~~VTISnn~f~~h~-----k~~Li--G~sd~~~~d 260 (399)
T 2o04_A 191 GTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH---HDGQTDASNGANYITMSYNYYHDHD-----KSSIF--GSSDSKTSD 260 (399)
T ss_dssp CEEEEEESCEEECTTCCGGGSCEETTEECCC---CCCSEEEETTCEEEEEESCEEEEEE-----ECCEE--SCCTTCGGG
T ss_pred CCcEEEEeeeeecCCCccccccccccceeec---cccceeeeccCCcEEEEeeEEcCCC-----ceeEe--CCCCCCccc
Confidence 78999999999854331 00011444431 1256677666667788999987431 12222 222211
Q ss_pred -CCeEEEEEcCEEee
Q 008293 446 -QNTGISIHNCTIKA 459 (571)
Q Consensus 446 -~~~G~vf~~c~i~~ 459 (571)
....+.|+++.|..
T Consensus 261 ~g~~~vT~h~N~f~~ 275 (399)
T 2o04_A 261 DGKLKITLHHNRYKN 275 (399)
T ss_dssp TTCCCEEEESCEEEE
T ss_pred cCceeEEEECcEecC
Confidence 12357788887754
No 39
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.20 E-value=0.1 Score=54.58 Aligned_cols=112 Identities=17% Similarity=0.231 Sum_probs=76.5
Q ss_pred eeeeecCCCceEEEeceeecc--------------------cc-eeec--cCCceeeeecEEeeccceeecc--ceEEEe
Q 008293 365 AVAVRNGADKSTFYSCSFEGY--------------------QD-TLYA--HSLRQFYRDCDIYGTIDFIFGN--AAVVFQ 419 (571)
Q Consensus 365 AvAl~~~~d~~~~~~c~~~g~--------------------QD-Tl~~--~~~r~~~~~c~I~G~vDfIfG~--~~avf~ 419 (571)
...+.+.++.+.++|+.|+.. |. .|++ ++.|..|++|.+.|.=|-+|-. +..+|.
T Consensus 114 saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 114 SSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKTGSRSYFS 193 (364)
T ss_dssp CCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECTTCEEEEE
T ss_pred eeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCCCCCEEEE
Confidence 456788999999999999733 32 5555 3568889999999999998865 789999
Q ss_pred eceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecCCccccccccceEe---eccccCCCcEEEeccCCC
Q 008293 420 NCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAADDLANSINATQTYL---GRPWKEYSRTVYMQSFMD 492 (571)
Q Consensus 420 ~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL---GRpW~~~s~~v~~~s~l~ 492 (571)
+|.|.- ..-+|.=.+ --+|++|+|..-...... ....|+ +|+-....--||.+|.+.
T Consensus 194 ~c~I~G------tvDFIFG~a--------~a~f~~c~i~~~~~~~~~--~~~g~ITA~~~~~~~~~G~vf~~c~i~ 253 (364)
T 3uw0_A 194 DCEISG------HVDFIFGSG--------ITVFDNCNIVARDRSDIE--PPYGYITAPSTLTTSPYGLIFINSRLT 253 (364)
T ss_dssp SCEEEE------SEEEEEESS--------EEEEESCEEEECCCSSCS--SCCEEEEEECCCTTCSCCEEEESCEEE
T ss_pred cCEEEc------CCCEECCcc--------eEEEEeeEEEEeccCccc--CCccEEEeCCcCCCCCcEEEEEeeEEe
Confidence 999983 234665332 259999999864321100 011232 454333345899999985
No 40
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=94.96 E-value=0.14 Score=54.34 Aligned_cols=112 Identities=10% Similarity=0.160 Sum_probs=76.1
Q ss_pred eeeecCCCceEEEeceee---c-------cc-ceeeccCCceeeeecEEeeccceeec-------------cceEEEeec
Q 008293 366 VAVRNGADKSTFYSCSFE---G-------YQ-DTLYAHSLRQFYRDCDIYGTIDFIFG-------------NAAVVFQNC 421 (571)
Q Consensus 366 vAl~~~~d~~~~~~c~~~---g-------~Q-DTl~~~~~r~~~~~c~I~G~vDfIfG-------------~~~avf~~c 421 (571)
.-+.+.++.+.++|..|+ | .| -.|++.+-|..|++|.+.|.=|-+|- .+..+|.+|
T Consensus 194 AT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~C 273 (422)
T 3grh_A 194 AVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNS 273 (422)
T ss_dssp CSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESC
T ss_pred EEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEec
Confidence 346678999999999996 2 23 46777788999999999999999994 468899999
Q ss_pred eeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecCCccccccccceEeec-cccCCCcEEEeccCCCC
Q 008293 422 NMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAADDLANSINATQTYLGR-PWKEYSRTVYMQSFMDS 493 (571)
Q Consensus 422 ~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGR-pW~~~s~~v~~~s~l~~ 493 (571)
.|.- .--+|.=.+ --+|++|.|..-..... ..+-+--+| +=....--||.+|.|..
T Consensus 274 yIeG------tVDFIFG~a--------~AvFe~C~I~s~~~~~~--~~g~ITA~~t~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 274 YIEG------DVDIVSGRG--------AVVFDNTEFRVVNSRTQ--QEAYVFAPATLSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp EEEE------SEEEEEESS--------EEEEESCEEEECCSSCS--SCCEEEEECCBTTCCCCEEEESCEEEE
T ss_pred EEec------cccEEccCc--------eEEEEeeEEEEecCCCC--CceEEEecCCCCCCCCEEEEECCEEEe
Confidence 9973 334665322 25999999986542110 011111223 22233457999999864
No 41
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=94.79 E-value=0.3 Score=53.73 Aligned_cols=108 Identities=15% Similarity=0.108 Sum_probs=75.0
Q ss_pred EEcCcEEEEEeEeecCCCCCccceeeeecCC-Cc--eEEEeceeec----ccceeeccCCceeeeecEEeeccceee-cc
Q 008293 342 VVGQGFVAVNITFRNTAGPTKHQAVAVRNGA-DK--STFYSCSFEG----YQDTLYAHSLRQFYRDCDIYGTIDFIF-GN 413 (571)
Q Consensus 342 v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~-d~--~~~~~c~~~g----~QDTl~~~~~r~~~~~c~I~G~vDfIf-G~ 413 (571)
....++.++||+|+|+. ...+.+.... +. +.+.++.+.+ .-|.+-.. .....++|+|.-.-|-|- +.
T Consensus 290 ~~c~nV~I~Giti~Nsp----~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~-~nV~I~n~~i~~gDDcIaIks 364 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPP----FNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY-PGTILQDVFYHTDDDGLKMYY 364 (549)
T ss_dssp SSCEEEEEESCEEECCS----SCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC-TTCEEEEEEEEESSCCEECCS
T ss_pred CCceEEEEECcEEECCC----ceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc-CCEEEEeeEEeCCCCEEEECC
Confidence 44678999999999984 2334444455 67 8999999864 24666555 556788999997777653 34
Q ss_pred ceEEEeeceeeecCCCCCCcee-EEecCCCCCCCCeEEEEEcCEEeecC
Q 008293 414 AAVVFQNCNMYPRRPLDNQFNA-ITAQGRTDPNQNTGISIHNCTIKAAD 461 (571)
Q Consensus 414 ~~avf~~c~i~~~~~~~~~~~~-itA~gr~~~~~~~G~vf~~c~i~~~~ 461 (571)
...+++||++.... .+. |+. |+ .+..-..+.|.||+|....
T Consensus 365 ~NI~I~n~~~~~~~-----g~~~Isi-Gs-~~~~V~NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 365 SNVTARNIVMWKES-----VAPVVEF-GW-TPRNTENVLFDNVDVIHQA 406 (549)
T ss_dssp SSEEEEEEEEEECS-----SSCSEEC-CB-SCCCEEEEEEEEEEEEECC
T ss_pred CCEEEEeeEEEcCC-----CCceEEE-CC-CCCcEEEEEEEeeEEECcc
Confidence 57889999997532 123 543 44 2445567899999998754
No 42
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=94.51 E-value=0.079 Score=54.75 Aligned_cols=133 Identities=14% Similarity=0.155 Sum_probs=74.6
Q ss_pred EcCcEEEEEeEeecCCCCCccceeeeecCCCc-eEEEeceeecc----------cceeeccCCceeeeecEEeecccee-
Q 008293 343 VGQGFVAVNITFRNTAGPTKHQAVAVRNGADK-STFYSCSFEGY----------QDTLYAHSLRQFYRDCDIYGTIDFI- 410 (571)
Q Consensus 343 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~-~~~~~c~~~g~----------QDTl~~~~~r~~~~~c~I~G~vDfI- 410 (571)
..+ +.++||+++|+.. ..+-+ ...++ +.+.+|.+... -|.+-........++|+|.-.-|-|
T Consensus 104 ~~~-v~i~giti~nsp~----~~i~i-~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi~s~nV~I~n~~i~~gDDcIa 177 (335)
T 1k5c_A 104 KGS-GTYKKFEVLNSPA----QAISV-GPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVSANNVTIQNCIVKNQDDCIA 177 (335)
T ss_dssp EEE-EEEESCEEESCSS----CCEEE-EEEEEEEEEESCEEECGGGGGGGCCCSCCSEEEECSSEEEESCEEESSSCSEE
T ss_pred ceE-EEEEEEEEECCCc----ceEEE-EccCCeEEEEEEEEECCCCcccccCCCCCeEcccCCeEEEEeeEEEcCCCEEE
Confidence 345 9999999999853 22222 24566 88999999864 3344442234567888888654532
Q ss_pred ecc-ceEEEeeceeeecCCCCCCceeEEecCCCC-CCCCeEEEEEcCEEeecCCccccccccceEeeccccCCCcEEEec
Q 008293 411 FGN-AAVVFQNCNMYPRRPLDNQFNAITAQGRTD-PNQNTGISIHNCTIKAADDLANSINATQTYLGRPWKEYSRTVYMQ 488 (571)
Q Consensus 411 fG~-~~avf~~c~i~~~~~~~~~~~~itA~gr~~-~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~~v~~~ 488 (571)
++. ...+|+||.+... .| |.. |... ...-..+.|+||++....... ..++.-||+=.....+.|-+
T Consensus 178 iksg~nI~i~n~~~~~g------hG-isI-GS~g~~~~v~nV~v~n~~~~~t~~gi----rIKt~~g~~~G~v~nI~f~n 245 (335)
T 1k5c_A 178 INDGNNIRFENNQCSGG------HG-ISI-GSIATGKHVSNVVIKGNTVTRSMYGV----RIKAQRTATSASVSGVTYDA 245 (335)
T ss_dssp EEEEEEEEEESCEEESS------CC-EEE-EEECTTCEEEEEEEESCEEEEEEEEE----EEEEETTCCSCEEEEEEEES
T ss_pred eeCCeeEEEEEEEEECC------cc-CeE-eeccCCCCEEEEEEEeeEEECCCceE----EEEEeCCCCcceEeeeEEEE
Confidence 222 4678888888742 12 333 2111 233446789999998754210 12333333212234566666
Q ss_pred cCCCC
Q 008293 489 SFMDS 493 (571)
Q Consensus 489 s~l~~ 493 (571)
-.|.+
T Consensus 246 i~~~~ 250 (335)
T 1k5c_A 246 NTISG 250 (335)
T ss_dssp CEEEE
T ss_pred EEEEc
Confidence 65544
No 43
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=94.43 E-value=0.25 Score=52.50 Aligned_cols=101 Identities=19% Similarity=0.261 Sum_probs=63.1
Q ss_pred CcceEEeecCCCceEEeccccccCCcccccceeEEE-EcCcEEEEEeEeecCCC--C-------------Cccceeeeec
Q 008293 307 KKNLMMIGAGKGLTVITGNRSYVDGWTTFNTATFAV-VGQGFVAVNITFRNTAG--P-------------TKHQAVAVRN 370 (571)
Q Consensus 307 ~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g--~-------------~~~qAvAl~~ 370 (571)
..|+||+|.|.+ ..|.|. -|.+ .+++++++||+|++... | ....|+-+ .
T Consensus 131 ~snkTI~G~G~~-~~i~g~-------------gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~ 195 (416)
T 1vbl_A 131 GSNTSIIGVGKD-AKIKGG-------------GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISI-E 195 (416)
T ss_dssp CSSEEEEECTTC-CEEESC-------------EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEE-E
T ss_pred CCCeeEEecCCC-eEEecC-------------EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEe-c
Confidence 358999999854 444443 3555 46899999999998632 1 11234444 3
Q ss_pred CCCceEEEeceeecccce---eeccCCceeeeecEEeeccceeeccceEEEeeceeee
Q 008293 371 GADKSTFYSCSFEGYQDT---LYAHSLRQFYRDCDIYGTIDFIFGNAAVVFQNCNMYP 425 (571)
Q Consensus 371 ~~d~~~~~~c~~~g~QDT---l~~~~~r~~~~~c~I~G~vDfIfG~~~avf~~c~i~~ 425 (571)
.+.++-+.+|.|.-..|. .-...||++. .-.|.+|+.-|...+-+.+|.|..
T Consensus 196 ~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~---~~DGl~Di~~~s~~VTISnn~f~~ 250 (416)
T 1vbl_A 196 GSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQ---QHDGALDIKNSSDFITISYNVFTN 250 (416)
T ss_dssp SCEEEEEESCEEECTTCCGGGSCEETTEECC---CCCCSEEEESSCEEEEEESCEEEE
T ss_pred CCceEEEEccEEecCCCcccccccccCccee---ecccceeeecCCCcEEEEeeEEcC
Confidence 578999999999854321 0001245543 112566776566677788888874
No 44
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=93.01 E-value=1 Score=49.68 Aligned_cols=107 Identities=14% Similarity=0.106 Sum_probs=73.4
Q ss_pred EcCcEEEEEeEeecCCCCCccceeeeecCCCce--EEEeceeec---c-cceeeccCCceeeeecEEeecccee-eccce
Q 008293 343 VGQGFVAVNITFRNTAGPTKHQAVAVRNGADKS--TFYSCSFEG---Y-QDTLYAHSLRQFYRDCDIYGTIDFI-FGNAA 415 (571)
Q Consensus 343 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~--~~~~c~~~g---~-QDTl~~~~~r~~~~~c~I~G~vDfI-fG~~~ 415 (571)
...++.++||||.|+.- ..+-+ ...+++ .+.+|++.+ . -|.+-.. .....++|+|.-.-|-| .+...
T Consensus 331 ~c~NV~I~Giti~NSp~----w~i~~-~~c~nV~~~I~nv~i~~~~~~nTDGIDi~-~NV~I~nc~I~~gDDcIaIks~N 404 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPF----NTMDF-NGNSGISSQISDYKQVGAFFFQTDGPEIY-PNSVVHDVFWHVNDDAIKIYYSG 404 (574)
T ss_dssp SSEEEEEESCEEECCSS----CSEEE-CSSSCEEEEEEEEEEECCCSTTCCCCBCC-TTCEEEEEEEEESSCSEECCSTT
T ss_pred CceeEEEECeEEECCCC----cEEee-cCCCChhhEEEeeEeeCCCCCCCccCccc-CCEEEEeeEEECCCCEEEECCcc
Confidence 57889999999999732 22222 457788 999998763 3 5666666 55678899998776755 23467
Q ss_pred EEEeeceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecC
Q 008293 416 VVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAAD 461 (571)
Q Consensus 416 avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 461 (571)
.+++||++..... .+.|.. |. ++..-..+.|.||+|....
T Consensus 405 I~I~nc~i~~g~g----~g~IsI-GS-~~g~V~NV~v~N~~i~~~~ 444 (574)
T 1ogo_X 405 ASVSRATIWKCHN----DPIIQM-GW-TSRDISGVTIDTLNVIHTR 444 (574)
T ss_dssp CEEEEEEEEECSS----SCSEEC-CS-SCCCEEEEEEEEEEEEECC
T ss_pred EEEEeEEEECCCC----CceEEE-cC-CCCcEEEEEEEeEEEECCc
Confidence 8899999876321 112443 33 3455568899999998754
No 45
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=87.98 E-value=4.8 Score=41.23 Aligned_cols=113 Identities=15% Similarity=0.186 Sum_probs=70.3
Q ss_pred EcCcEEEEEeEeecCCCCC--ccceeeeec-CCCceEEEeceeecccceeeccCCce-eeeecEEeeccceeecc-----
Q 008293 343 VGQGFVAVNITFRNTAGPT--KHQAVAVRN-GADKSTFYSCSFEGYQDTLYAHSLRQ-FYRDCDIYGTIDFIFGN----- 413 (571)
Q Consensus 343 ~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~~~~c~~~g~QDTl~~~~~r~-~~~~c~I~G~vDfIfG~----- 413 (571)
..++++++|++|.+..+.. .+-.=++.+ .+.++.+.||.|..--|-+...+++. .+++|++.+.-.+-+|.
T Consensus 130 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGSlg~~~ 209 (339)
T 2iq7_A 130 SATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGGHGLSIGSVGGRS 209 (339)
T ss_dssp SCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEESSSS
T ss_pred ccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEECCceEEECcCCccc
Confidence 4677888999998864310 111223444 45788889999887778888887755 67888888766666654
Q ss_pred ----ceEEEeeceeeecCCCCCCceeE-EecCCCCCCCCeEEEEEcCEEeecC
Q 008293 414 ----AAVVFQNCNMYPRRPLDNQFNAI-TAQGRTDPNQNTGISIHNCTIKAAD 461 (571)
Q Consensus 414 ----~~avf~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~~ 461 (571)
..++|+||++.... ..-.| +.+|| ...-..+.|+|.++....
T Consensus 210 ~~~v~nV~v~n~~~~~~~----~girIkt~~g~--~G~v~nI~~~ni~~~~v~ 256 (339)
T 2iq7_A 210 DNTVKTVTISNSKIVNSD----NGVRIKTVSGA--TGSVSGVTYSGITLSNIA 256 (339)
T ss_dssp CCEEEEEEEEEEEEESCS----EEEEEEEETTC--CCEEEEEEEEEEEEEEES
T ss_pred CCCEEEEEEEeeEEECCC----cEEEEEEeCCC--CeEEEEEEEEeEEccCcc
Confidence 34578888886421 11122 22333 122345678888887643
No 46
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=87.37 E-value=1.4 Score=48.57 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=30.3
Q ss_pred cccHHHHHHhCcCCCCCCCCCeEEEEEece-EEee-------------eEEeeccCcceEEeecC
Q 008293 266 YTTISDAVAAAPNSTDSSSNGYYLIYVAAG-VYEE-------------YVSIPKQKKNLMMIGAG 316 (571)
Q Consensus 266 f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G-~Y~E-------------~v~i~~~~~~itl~G~g 316 (571)
=.-||+|++++.... .-+|+|.+| +|.- .|.+ |.+++|.-+|
T Consensus 64 T~AIqkAIdaCs~~G------GgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L---kSnVtL~LdG 119 (600)
T 2x6w_A 64 RQYLQAAIDYVSSNG------GGTITIPAGYTWYLGSYGVGGIAGHSGIIQL---RSNVNLNIEG 119 (600)
T ss_dssp HHHHHHHHHHHHHTT------CEEEEECTTCEEEECSCCCGGGGGGTEEEEC---CTTEEEEECS
T ss_pred HHHHHHHHHHhhhcC------CCEEEECCCCEEEecccccccccccccceEE---cCceEEeeec
Confidence 356999999986531 268999999 9975 3544 3478777776
No 47
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=86.19 E-value=7.6 Score=43.10 Aligned_cols=109 Identities=9% Similarity=0.110 Sum_probs=66.1
Q ss_pred EEcCcEEEEEeEeecCCCCCccceeeeec-CCCceEEEeceeecccceeeccCC------------ceeeeecEEeeccc
Q 008293 342 VVGQGFVAVNITFRNTAGPTKHQAVAVRN-GADKSTFYSCSFEGYQDTLYAHSL------------RQFYRDCDIYGTID 408 (571)
Q Consensus 342 v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g~QDTl~~~~~------------r~~~~~c~I~G~vD 408 (571)
...++++++|++|.+...+ ... ++.+ .+.++.+.||.|..--|-+..+++ .-.+++|++.+.-+
T Consensus 360 ~~~~nv~i~~v~i~~~~~~-NtD--Gidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg 436 (608)
T 2uvf_A 360 LENHNVVANGLIHQTYDAN-NGD--GIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHG 436 (608)
T ss_dssp ESCEEEEEESCEEECTTCT-TCC--SEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSC
T ss_pred ecCCCEEEeeEEEcCCCCC-CCC--eEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCC
Confidence 3456788888887653222 123 3444 457788888888765566666543 23578888877656
Q ss_pred ee-ecc------ceEEEeeceeeecCCCCCCce-eE-EecCCCCCCCCeEEEEEcCEEeec
Q 008293 409 FI-FGN------AAVVFQNCNMYPRRPLDNQFN-AI-TAQGRTDPNQNTGISIHNCTIKAA 460 (571)
Q Consensus 409 fI-fG~------~~avf~~c~i~~~~~~~~~~~-~i-tA~gr~~~~~~~G~vf~~c~i~~~ 460 (571)
.+ +|. ...+|+||.+..-. .| .| |.+||. ..-..+.|+|+++...
T Consensus 437 ~~~iGS~~~~~v~nI~v~n~~~~~t~-----~GirIKt~~g~g--G~v~nI~~~ni~m~~v 490 (608)
T 2uvf_A 437 AIVTGSHTGAWIEDILAENNVMYLTD-----IGLRAKSTSTIG--GGARNVTFRNNAMRDL 490 (608)
T ss_dssp SEEEESCCTTCEEEEEEESCEEESCS-----EEEEEEEETTTC--CEEEEEEEEEEEEEEE
T ss_pred eEEEcccCCCCEEEEEEEeEEEECCC-----ceEEEeeecCCC--ceEECcEEEeeEEEcc
Confidence 43 665 34788999887421 11 12 344442 2234677888888765
No 48
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=85.76 E-value=13 Score=40.99 Aligned_cols=79 Identities=10% Similarity=-0.015 Sum_probs=57.8
Q ss_pred cCcE--EEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCceeeeecEEeeccc---eeecc-----
Q 008293 344 GQGF--VAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYGTID---FIFGN----- 413 (571)
Q Consensus 344 ~~~f--~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G~vD---fIfG~----- 413 (571)
.+++ +++|+++.+..+. +.=++.+. .++.+.||.|.-.=|-+-..+..-.+++|++.+.-. .-+|.
T Consensus 355 c~nV~~~I~nv~i~~~~~~---nTDGIDi~-~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i~~g~g~g~IsIGS~~g~V 430 (574)
T 1ogo_X 355 NSGISSQISDYKQVGAFFF---QTDGPEIY-PNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDI 430 (574)
T ss_dssp SSCEEEEEEEEEEECCCST---TCCCCBCC-TTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSSCCCE
T ss_pred CCChhhEEEeeEeeCCCCC---CCccCccc-CCEEEEeeEEECCCCEEEECCccEEEEeEEEECCCCCceEEEcCCCCcE
Confidence 5778 9999998875432 23345666 999999999999889888887667899999885321 22342
Q ss_pred ceEEEeeceeeec
Q 008293 414 AAVVFQNCNMYPR 426 (571)
Q Consensus 414 ~~avf~~c~i~~~ 426 (571)
-.+.|+||+|...
T Consensus 431 ~NV~v~N~~i~~~ 443 (574)
T 1ogo_X 431 SGVTIDTLNVIHT 443 (574)
T ss_dssp EEEEEEEEEEEEC
T ss_pred EEEEEEeEEEECC
Confidence 3568999999754
No 49
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=85.64 E-value=6.3 Score=41.46 Aligned_cols=84 Identities=17% Similarity=0.235 Sum_probs=55.7
Q ss_pred eEEEEcCcEEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccc---------eeeccC---CceeeeecEEeec
Q 008293 339 TFAVVGQGFVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQD---------TLYAHS---LRQFYRDCDIYGT 406 (571)
Q Consensus 339 t~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QD---------Tl~~~~---~r~~~~~c~I~G~ 406 (571)
-+.|.+++.++++++|.+.... .+.|.-.+.+..+.+|.+.+..| .+.++. ....|++|.+..+
T Consensus 131 GI~v~gs~~~i~n~~i~~n~~~----GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N 206 (400)
T 1ru4_A 131 GAYVIGSHNTFENTAFHHNRNT----GLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWEN 206 (400)
T ss_dssp SEEECSSSCEEESCEEESCSSC----SEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESC
T ss_pred cEEEeCCCcEEEeEEEECCCce----eEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeec
Confidence 4667888899999999876421 13333233478888999998764 333331 2446889999877
Q ss_pred cce---eecc-ceEEEeeceeeec
Q 008293 407 IDF---IFGN-AAVVFQNCNMYPR 426 (571)
Q Consensus 407 vDf---IfG~-~~avf~~c~i~~~ 426 (571)
.|. +|+. +.++|++|..+..
T Consensus 207 ~ddGidl~~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 207 SDDGFDLFDSPQKVVIENSWAFRN 230 (400)
T ss_dssp SSCSEECTTCCSCCEEESCEEEST
T ss_pred CCCcEEEEecCCCEEEEeEEEECC
Confidence 662 3443 4568999988754
No 50
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=84.72 E-value=4 Score=41.89 Aligned_cols=114 Identities=14% Similarity=0.154 Sum_probs=72.6
Q ss_pred EEcCcEEEEEeEeecCCCCC--ccceeeeec-CCCceEEEeceeecccceeeccCCce-eeeecEEeeccceeecc----
Q 008293 342 VVGQGFVAVNITFRNTAGPT--KHQAVAVRN-GADKSTFYSCSFEGYQDTLYAHSLRQ-FYRDCDIYGTIDFIFGN---- 413 (571)
Q Consensus 342 v~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~~~~c~~~g~QDTl~~~~~r~-~~~~c~I~G~vDfIfG~---- 413 (571)
...++++++|++|.+..+.. .+-.=++.+ .+.++.+.+|.|..--|-+...+++. .+++|++.+.-.+-+|.
T Consensus 133 ~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~g~~ 212 (339)
T 1ia5_A 133 AGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSVGGR 212 (339)
T ss_dssp ESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSSCEEEEEECSS
T ss_pred ecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECCceEEECcCCcc
Confidence 34678999999999864311 112223554 46889999999987778888887755 68899988766666654
Q ss_pred -----ceEEEeeceeeecCCCCCCceeE-EecCCCCCCCCeEEEEEcCEEeecC
Q 008293 414 -----AAVVFQNCNMYPRRPLDNQFNAI-TAQGRTDPNQNTGISIHNCTIKAAD 461 (571)
Q Consensus 414 -----~~avf~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~~ 461 (571)
..+.|+||++.... ..-.| +.+|| ...-..+.|+|.++....
T Consensus 213 ~~~~v~nV~v~n~~~~~t~----~girIKt~~g~--~G~v~nI~~~ni~~~~v~ 260 (339)
T 1ia5_A 213 SDNTVKNVTFVDSTIINSD----NGVRIKTNIDT--TGSVSDVTYKDITLTSIA 260 (339)
T ss_dssp SCCEEEEEEEEEEEEESCS----EEEEEEEETTC--CCEEEEEEEEEEEEEEES
T ss_pred cCCCEEEEEEEeeEEECCC----cEEEEEEeCCC--CcEEEeeEEEEEEEECcc
Confidence 24578888886421 11122 22333 222345678888887543
No 51
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=81.61 E-value=5.6 Score=45.02 Aligned_cols=102 Identities=22% Similarity=0.321 Sum_probs=66.8
Q ss_pred CcccHHHHHHhCcCCCCCCCCCeEEEEEeceEEe--eeEEeeccCcceEEeecCCCceEEecccc-ccCCcccccceeEE
Q 008293 265 DYTTISDAVAAAPNSTDSSSNGYYLIYVAAGVYE--EYVSIPKQKKNLMMIGAGKGLTVITGNRS-YVDGWTTFNTATFA 341 (571)
Q Consensus 265 ~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G~Y~--E~v~i~~~~~~itl~G~g~~~tiI~~~~~-~~~g~~t~~sat~~ 341 (571)
|=..||+||+++..+ .+||+.+|+|+ ..|.|+. ++.|+|++- .+|.+... ..|- + ...+.|.
T Consensus 416 DT~Ai~~al~aa~~g--------~~v~~P~G~Y~vt~Ti~ip~---~~~ivG~~~--~~I~~~G~~F~d~-~-~P~pvv~ 480 (758)
T 3eqn_A 416 DTQAIKNVFAKYAGC--------KIIFFDAGTYIVTDTIQIPA---GTQIVGEVW--SVIMGTGSKFTDY-N-NPQPVIQ 480 (758)
T ss_dssp CHHHHHHHHHHHTTT--------SEEECCSEEEEESSCEEECT---TCEEECCSS--EEEEECSGGGCCT-T-SCEEEEE
T ss_pred hHHHHHHHHHHhcCC--------CEEEECCCEeEECCeEEcCC---CCEEEeccc--ceEecCCccccCC-C-CCeeeEE
Confidence 346799999976433 58999999998 5799974 799999985 45554322 2221 1 1235666
Q ss_pred EE----cCcEEEEEeEeecCCCCCccceeeeecC-------CCceEEEeceee
Q 008293 342 VV----GQGFVAVNITFRNTAGPTKHQAVAVRNG-------ADKSTFYSCSFE 383 (571)
Q Consensus 342 v~----~~~f~~~~lt~~Nt~g~~~~qAvAl~~~-------~d~~~~~~c~~~ 383 (571)
|. ...+.+.+|.|. +.|+. .-|+.|..+ .+.+.+.++.|+
T Consensus 481 VG~~gd~G~veisdl~~~-t~g~~-~gail~ewn~~~~~~~~~~~~mwDvh~R 531 (758)
T 3eqn_A 481 VGAPGSSGVVEITDMIFT-TRGPA-AGAIIVEWNVHDPSGQQAAAGAWDTHLI 531 (758)
T ss_dssp ESCTTCBSCEEEESCEEE-ECSCC-TTEEEEEECCBCCTTCTTCEEEESCBEE
T ss_pred eCCCCCCCeEEEEeEEEE-ecCCC-CCcEEEEEcCCCCCCCCCCeeEEEEEEE
Confidence 62 246999999997 33432 335555442 246788888888
No 52
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=81.57 E-value=3.8 Score=42.24 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=70.6
Q ss_pred EcCcEEEEEeEeecCCCCC----------ccceeeeec-CCCceEEEeceeecccceeeccCCce-eeeecEEeecccee
Q 008293 343 VGQGFVAVNITFRNTAGPT----------KHQAVAVRN-GADKSTFYSCSFEGYQDTLYAHSLRQ-FYRDCDIYGTIDFI 410 (571)
Q Consensus 343 ~~~~f~~~~lt~~Nt~g~~----------~~qAvAl~~-~~d~~~~~~c~~~g~QDTl~~~~~r~-~~~~c~I~G~vDfI 410 (571)
..++++++|++|.+..+.. .+-.=++.+ .+.++.+.||.|..--|-+...+++. .+++|++.+.-.+-
T Consensus 134 ~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGis 213 (349)
T 1hg8_A 134 GSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGGHGLS 213 (349)
T ss_dssp SCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEESSCCEE
T ss_pred ccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeCCcceE
Confidence 3678999999999864321 122234554 46889999999987778888887755 67899888765665
Q ss_pred ecc---------ceEEEeeceeeecCCCCCCceeEE-ecCCCCCCCCeEEEEEcCEEeec
Q 008293 411 FGN---------AAVVFQNCNMYPRRPLDNQFNAIT-AQGRTDPNQNTGISIHNCTIKAA 460 (571)
Q Consensus 411 fG~---------~~avf~~c~i~~~~~~~~~~~~it-A~gr~~~~~~~G~vf~~c~i~~~ 460 (571)
+|. -.+.|+||+|.... ..-.|- .+|| ...-..+.|+|.++...
T Consensus 214 iGS~G~~~~~~v~nV~v~n~~~~~~~----~GirIKt~~g~--~G~v~nI~~~ni~~~~v 267 (349)
T 1hg8_A 214 IGSVGGKSDNVVDGVQFLSSQVVNSQ----NGCRIKSNSGA--TGTINNVTYQNIALTNI 267 (349)
T ss_dssp EEEESSSSCCEEEEEEEEEEEEEEEE----EEEEEEEETTC--CEEEEEEEEEEEEEEEE
T ss_pred EccccccccCCEEEEEEEEEEEECCC----cEEEEEecCCC--CccccceEEEEEEEEcc
Confidence 543 24578899887432 011222 2232 11223456888777653
No 53
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=79.90 E-value=11 Score=39.89 Aligned_cols=19 Identities=21% Similarity=0.158 Sum_probs=9.4
Q ss_pred eeeeecCCCceEEEeceee
Q 008293 365 AVAVRNGADKSTFYSCSFE 383 (571)
Q Consensus 365 AvAl~~~~d~~~~~~c~~~ 383 (571)
++++.....++.+.||.+.
T Consensus 199 ~Iai~s~~~nI~I~n~~~~ 217 (422)
T 1rmg_A 199 CVTVKSPANNILVESIYCN 217 (422)
T ss_dssp EEEEEEEEEEEEEEEEEEE
T ss_pred eEEeCCCCcCEEEEeEEEc
Confidence 4444444445555555544
No 54
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=79.08 E-value=10 Score=41.47 Aligned_cols=78 Identities=12% Similarity=0.009 Sum_probs=57.0
Q ss_pred Cc--EEEEEeEeecCCCCCccceeeeecCCCceEEEeceeecccceeeccCCceeeeecEEeeccc---eeecc-----c
Q 008293 345 QG--FVAVNITFRNTAGPTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQFYRDCDIYGTID---FIFGN-----A 414 (571)
Q Consensus 345 ~~--f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~~~~~c~I~G~vD---fIfG~-----~ 414 (571)
++ ++++|+++.+..++ +.-++.+. .++.+.||.|.--=|-+-..+..-.+++|++.+... +-.|. -
T Consensus 318 ~ni~V~I~n~~i~~~~~~---NTDGidi~-~nV~I~n~~i~~gDDcIaIks~NI~I~n~~~~~~~g~~~IsiGs~~~~V~ 393 (549)
T 1x0c_A 318 DLITCRVDDYKQVGAFYG---QTDGLEMY-PGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTE 393 (549)
T ss_dssp GGEEEEEEEEEEECCCBT---TCCCCBCC-TTCEEEEEEEEESSCCEECCSSSEEEEEEEEEECSSSCSEECCBSCCCEE
T ss_pred CCCeEEEEeeEeEcCCCC---CCCccccc-CCEEEEeeEEeCCCCEEEECCCCEEEEeeEEEcCCCCceEEECCCCCcEE
Confidence 47 99999999875432 23355566 999999999998888888877666899999986432 33442 2
Q ss_pred eEEEeeceeeec
Q 008293 415 AVVFQNCNMYPR 426 (571)
Q Consensus 415 ~avf~~c~i~~~ 426 (571)
.+.|+||+|...
T Consensus 394 NV~v~n~~i~~s 405 (549)
T 1x0c_A 394 NVLFDNVDVIHQ 405 (549)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEeeEEECc
Confidence 568999998753
No 55
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=79.04 E-value=10 Score=38.83 Aligned_cols=112 Identities=16% Similarity=0.182 Sum_probs=71.4
Q ss_pred EEcCc-EEEEEeEeecCCC-----CCccceeeeecCCCceEEEeceeecccceeeccCCce-eeeecEEeeccceeecc-
Q 008293 342 VVGQG-FVAVNITFRNTAG-----PTKHQAVAVRNGADKSTFYSCSFEGYQDTLYAHSLRQ-FYRDCDIYGTIDFIFGN- 413 (571)
Q Consensus 342 v~~~~-f~~~~lt~~Nt~g-----~~~~qAvAl~~~~d~~~~~~c~~~g~QDTl~~~~~r~-~~~~c~I~G~vDfIfG~- 413 (571)
...++ ++++|++|.|..+ ......+-+ .+.++.+.||.|..--|-+-..+++. .+++|++.+.--+-+|.
T Consensus 125 ~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi--~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisIGS~ 202 (335)
T 1k5c_A 125 GPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV--SANNVTIQNCIVKNQDDCIAINDGNNIRFENNQCSGGHGISIGSI 202 (335)
T ss_dssp EEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE--ECSSEEEESCEEESSSCSEEEEEEEEEEEESCEEESSCCEEEEEE
T ss_pred EccCCeEEEEEEEEECCCCcccccCCCCCeEcc--cCCeEEEEeeEEEcCCCEEEeeCCeeEEEEEEEEECCccCeEeec
Confidence 34577 9999999998743 112333444 78889999999997777777777654 78899998754455542
Q ss_pred ------ceEEEeeceeeecCCCCCCceeE-EecCCCCCCCCeEEEEEcCEEeec
Q 008293 414 ------AAVVFQNCNMYPRRPLDNQFNAI-TAQGRTDPNQNTGISIHNCTIKAA 460 (571)
Q Consensus 414 ------~~avf~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~ 460 (571)
..++|+||++..... .-.| +.+||. +..-..+.|+|.++...
T Consensus 203 g~~~~v~nV~v~n~~~~~t~~----girIKt~~g~~-~G~v~nI~f~ni~~~~v 251 (335)
T 1k5c_A 203 ATGKHVSNVVIKGNTVTRSMY----GVRIKAQRTAT-SASVSGVTYDANTISGI 251 (335)
T ss_dssp CTTCEEEEEEEESCEEEEEEE----EEEEEEETTCC-SCEEEEEEEESCEEEEE
T ss_pred cCCCCEEEEEEEeeEEECCCc----eEEEEEeCCCC-cceEeeeEEEEEEEEcc
Confidence 245788888874320 1122 222331 12234567999888764
No 56
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=79.04 E-value=5.5 Score=41.29 Aligned_cols=82 Identities=15% Similarity=0.185 Sum_probs=59.6
Q ss_pred cCcEEEEEeEeecCCCCC--ccceeeeec-CCCceEEEeceeecccceeeccCCce-eeeecEEeeccceeecc------
Q 008293 344 GQGFVAVNITFRNTAGPT--KHQAVAVRN-GADKSTFYSCSFEGYQDTLYAHSLRQ-FYRDCDIYGTIDFIFGN------ 413 (571)
Q Consensus 344 ~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~~~~c~~~g~QDTl~~~~~r~-~~~~c~I~G~vDfIfG~------ 413 (571)
.++++++|++|.+..+.. .+..=++.+ .+.++.+.||.|..--|-+...+++. .+++|++.+.--+-+|.
T Consensus 156 ~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~G~~~~ 235 (362)
T 1czf_A 156 ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSVGDRSN 235 (362)
T ss_dssp CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEECSSSC
T ss_pred eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCCceeEEeeccccCC
Confidence 889999999999864310 112234555 45889999999998888899888755 78999998755565654
Q ss_pred ---ceEEEeeceeee
Q 008293 414 ---AAVVFQNCNMYP 425 (571)
Q Consensus 414 ---~~avf~~c~i~~ 425 (571)
-...|+||++..
T Consensus 236 ~~v~nV~v~n~~~~~ 250 (362)
T 1czf_A 236 NVVKNVTIEHSTVSN 250 (362)
T ss_dssp CEEEEEEEEEEEEEE
T ss_pred CCEEEEEEEeeEEEC
Confidence 145788888864
No 57
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=78.86 E-value=14 Score=38.23 Aligned_cols=108 Identities=14% Similarity=0.167 Sum_probs=69.3
Q ss_pred cCcEEEEEeEeecCCCCCccceeeeec-CCCceEEEeceeecccceeeccC-------CceeeeecEEeeccceeecc--
Q 008293 344 GQGFVAVNITFRNTAGPTKHQAVAVRN-GADKSTFYSCSFEGYQDTLYAHS-------LRQFYRDCDIYGTIDFIFGN-- 413 (571)
Q Consensus 344 ~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g~QDTl~~~~-------~r~~~~~c~I~G~vDfIfG~-- 413 (571)
.++++++|++|.+........ ++.+ .+.++.+.||.|..--|-+..++ ..-.+++|++.+.--+-+|.
T Consensus 182 ~~~v~i~~v~I~~~~~~~NtD--Gid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiGSe~ 259 (376)
T 1bhe_A 182 GDGFTAWKTTIKTPSTARNTD--GIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSET 259 (376)
T ss_dssp CEEEEEEEEEEECCTTCSSCC--SEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEEEEE
T ss_pred CCcEEEEeEEEECCCCCCCCc--eEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceEEEEEeeEEEccccEEeccCC
Confidence 578999999999876432333 3444 46889999999987778888773 13368899988654455553
Q ss_pred ---ceEEEeeceeeecCCCCCCce-eEEe-cCCCCCCCCeEEEEEcCEEeec
Q 008293 414 ---AAVVFQNCNMYPRRPLDNQFN-AITA-QGRTDPNQNTGISIHNCTIKAA 460 (571)
Q Consensus 414 ---~~avf~~c~i~~~~~~~~~~~-~itA-~gr~~~~~~~G~vf~~c~i~~~ 460 (571)
..++|+||+|.... .+ .|-. ++| ...-..+.|+|.++...
T Consensus 260 ~~v~nV~v~n~~~~~t~-----~GirIKt~~g~--~G~v~ni~f~ni~~~~v 304 (376)
T 1bhe_A 260 MGVYNVTVDDLKMNGTT-----NGLRIKSDKSA--AGVVNGVRYSNVVMKNV 304 (376)
T ss_dssp SSEEEEEEEEEEEESCS-----EEEEEECCTTT--CCEEEEEEEEEEEEESC
T ss_pred ccEeeEEEEeeEEeCCC-----cEEEEEEecCC--CceEeeEEEEeEEEeCC
Confidence 46789999987421 12 2221 222 12223466777777643
No 58
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=77.13 E-value=5.9 Score=40.53 Aligned_cols=114 Identities=11% Similarity=0.113 Sum_probs=74.4
Q ss_pred EcCcEEEEEeEeecCCCCC--ccceeeeec-CCCceEEEeceeecccceeeccCCce-eeeecEEeeccceeecc-----
Q 008293 343 VGQGFVAVNITFRNTAGPT--KHQAVAVRN-GADKSTFYSCSFEGYQDTLYAHSLRQ-FYRDCDIYGTIDFIFGN----- 413 (571)
Q Consensus 343 ~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~~~~c~~~g~QDTl~~~~~r~-~~~~c~I~G~vDfIfG~----- 413 (571)
..++++++|++|.+..+.. .+-.=++.+ .+.++.+.||.|..--|-+...+++. .+++|+..+.-.+-+|.
T Consensus 129 ~~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGS~g~~~ 208 (336)
T 1nhc_A 129 QATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSGGHGLSIGSVGGRD 208 (336)
T ss_dssp EEEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEESSSEEEEEEESSSS
T ss_pred EeCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEECCcCceEccCcccc
Confidence 3888999999999875310 012234555 46889999999988888888888755 68999998766676654
Q ss_pred ----ceEEEeeceeeecCCCCCCceeEEecCCCCCCCCeEEEEEcCEEeecC
Q 008293 414 ----AAVVFQNCNMYPRRPLDNQFNAITAQGRTDPNQNTGISIHNCTIKAAD 461 (571)
Q Consensus 414 ----~~avf~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 461 (571)
..+.|+||++.... ..-..=+.+|| ...-..+.|+|.++....
T Consensus 209 ~~~v~nV~v~n~~~~~t~---~girIkt~~g~--~G~v~nI~~~ni~~~~v~ 255 (336)
T 1nhc_A 209 DNTVKNVTISDSTVSNSA---NGVRIKTIYKE--TGDVSEITYSNIQLSGIT 255 (336)
T ss_dssp CCEEEEEEEEEEEEESCS---EEEEEEEETTC--CCEEEEEEEEEEEEEEES
T ss_pred CCCEEEEEEEeeEEECCC---cEEEEEEECCC--CCEEeeeEEeeEEeeccc
Confidence 24578888886421 00011123333 122345678888887643
No 59
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=75.91 E-value=30 Score=36.88 Aligned_cols=47 Identities=23% Similarity=0.362 Sum_probs=35.1
Q ss_pred CcccHHHHHHhCcCCCCCCCCCeEEEEEece----EEee--eEEeeccCcceEEeecCCCc
Q 008293 265 DYTTISDAVAAAPNSTDSSSNGYYLIYVAAG----VYEE--YVSIPKQKKNLMMIGAGKGL 319 (571)
Q Consensus 265 ~f~TIq~Ai~aap~~~~~~~~~r~~I~I~~G----~Y~E--~v~i~~~~~~itl~G~g~~~ 319 (571)
+-.-||+||+++.... +.-+|+|.+| +|.= .+.++ .+++|.|++...
T Consensus 67 DTaAIQkAIdaA~a~~-----GGGtVyVPaG~~~~tYlvt~tI~Lk---SnV~L~Ge~~At 119 (514)
T 2vbk_A 67 NYQAIQNAIDAVASLP-----SGGELFIPASNQAVGYIVGSTLLIP---GGVNIRGVGKAS 119 (514)
T ss_dssp CHHHHHHHHHHHHTST-----TCEEEECCCCSSTTCEEESSCEEEC---TTEEEECCSTTS
T ss_pred cHHHHHHHHHHHhhcC-----CCeEEEECCCCcceeEEECCeEEec---CCeEEEEecCce
Confidence 4577999999885431 2368999999 8974 57775 389999998653
No 60
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=70.03 E-value=53 Score=34.83 Aligned_cols=11 Identities=9% Similarity=0.202 Sum_probs=6.4
Q ss_pred EEEEEcCEEee
Q 008293 449 GISIHNCTIKA 459 (571)
Q Consensus 449 G~vf~~c~i~~ 459 (571)
.+.|+|.+.+.
T Consensus 375 nI~~~NI~~t~ 385 (448)
T 3jur_A 375 SVFVKNLKATG 385 (448)
T ss_dssp EEEEESCEEEE
T ss_pred EEEEEeEEEEe
Confidence 45566666554
No 61
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=64.62 E-value=60 Score=36.81 Aligned_cols=20 Identities=5% Similarity=0.003 Sum_probs=11.5
Q ss_pred CceEEEeceeecccceeecc
Q 008293 373 DKSTFYSCSFEGYQDTLYAH 392 (571)
Q Consensus 373 d~~~~~~c~~~g~QDTl~~~ 392 (571)
.++.++||.|.+.+-.|...
T Consensus 234 ~NVtV~Nc~~~nT~nGIRIK 253 (772)
T 3gqn_A 234 RHVVLSNNRSKGCYGGIEIK 253 (772)
T ss_dssp EEEEEEEEEEESSSEEEEEC
T ss_pred ccEEEEceEEECCCcEEEEE
Confidence 45566666666555555554
No 62
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=59.45 E-value=43 Score=36.20 Aligned_cols=94 Identities=10% Similarity=0.051 Sum_probs=56.8
Q ss_pred eeecCCCceEEEeceeeccccee-----------eccCCceeeeecEEeeccce----ee--------ccceEEEeecee
Q 008293 367 AVRNGADKSTFYSCSFEGYQDTL-----------YAHSLRQFYRDCDIYGTIDF----IF--------GNAAVVFQNCNM 423 (571)
Q Consensus 367 Al~~~~d~~~~~~c~~~g~QDTl-----------~~~~~r~~~~~c~I~G~vDf----If--------G~~~avf~~c~i 423 (571)
.|++.++.+.++++.|.+....+ ++.+.+--+++|.|.|.-+- |- ......+++|.|
T Consensus 88 ~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I 167 (506)
T 1dbg_A 88 KVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSF 167 (506)
T ss_dssp EEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEE
T ss_pred eEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEE
Confidence 57788899999999999765433 22224556889999875222 21 223458999999
Q ss_pred eecCCCCCCc----eeEEecCCC-CCCCCeEEEEEcCEEeecC
Q 008293 424 YPRRPLDNQF----NAITAQGRT-DPNQNTGISIHNCTIKAAD 461 (571)
Q Consensus 424 ~~~~~~~~~~----~~itA~gr~-~~~~~~G~vf~~c~i~~~~ 461 (571)
...... +.. +.|...+-. .-.+..+.+|++|.|...+
T Consensus 168 ~Gk~~~-G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~ 209 (506)
T 1dbg_A 168 TDKITF-DQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQ 209 (506)
T ss_dssp ECCCSS-SCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECC
T ss_pred ECCcCc-ceEEecCceeEeccCcccccccCCeEEeCcEEcccc
Confidence 864321 111 134443210 0023357799999998754
No 63
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=55.90 E-value=48 Score=34.79 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=36.6
Q ss_pred ceeEEEE--cCcEEEEEeEeecCC-CCCccceee----------------eecCCCceEEEeceeecccce--eeccCCc
Q 008293 337 TATFAVV--GQGFVAVNITFRNTA-GPTKHQAVA----------------VRNGADKSTFYSCSFEGYQDT--LYAHSLR 395 (571)
Q Consensus 337 sat~~v~--~~~f~~~~lt~~Nt~-g~~~~qAvA----------------l~~~~d~~~~~~c~~~g~QDT--l~~~~~r 395 (571)
.|-+.|. ++.+.++++.|++.. |-.-++|-+ |+-.+....+.++.+...+|. +|+...
T Consensus 161 dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns- 239 (410)
T 2inu_A 161 KTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGNHMGAGPDGVTLLAENH- 239 (410)
T ss_dssp CEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEESSSEEEEECSCEESCEEESCEEECCTTSEEEEEESE-
T ss_pred ceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEEecCCceeeccccccceEecceeeecCCCCEEEEEeC-
Confidence 3555565 788999999999864 111122222 222234445556666666666 666532
Q ss_pred eeeeecEEeec
Q 008293 396 QFYRDCDIYGT 406 (571)
Q Consensus 396 ~~~~~c~I~G~ 406 (571)
.++.|+|+
T Consensus 240 ---~~~~I~~N 247 (410)
T 2inu_A 240 ---EGLLVTGN 247 (410)
T ss_dssp ---ESCEEESC
T ss_pred ---CCCEEECC
Confidence 45555555
No 64
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=55.15 E-value=34 Score=37.83 Aligned_cols=20 Identities=5% Similarity=0.003 Sum_probs=11.3
Q ss_pred CceEEEeceeecccceeecc
Q 008293 373 DKSTFYSCSFEGYQDTLYAH 392 (571)
Q Consensus 373 d~~~~~~c~~~g~QDTl~~~ 392 (571)
.++.|+||.|.+.+-.+...
T Consensus 234 ~NVtV~Nc~i~nt~~GIrIK 253 (609)
T 3gq8_A 234 RHVVLSNNRSKGCYGGIEIK 253 (609)
T ss_dssp EEEEEESEEEESSSEEEEEE
T ss_pred ccEEEEeeEEECCCCEEEEE
Confidence 45566666666555555543
No 65
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=54.05 E-value=0.83 Score=48.75 Aligned_cols=91 Identities=12% Similarity=0.010 Sum_probs=67.4
Q ss_pred EEcCCCCCCcccHHHHHHhCcCCCCCCCCCeE------EEEEeceEEeeeEEeeccCcceEEeecCC---CceEEecccc
Q 008293 257 VVNPNGTADYTTISDAVAAAPNSTDSSSNGYY------LIYVAAGVYEEYVSIPKQKKNLMMIGAGK---GLTVITGNRS 327 (571)
Q Consensus 257 ~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~r~------~I~I~~G~Y~E~v~i~~~~~~itl~G~g~---~~tiI~~~~~ 327 (571)
.|+.+..|.+ +|+|.+.++-.+. .+. .+-|++|+|+|.|.|+.+++++++.|=+. +.|.|+++..
T Consensus 295 ~~~~~~~g~~--~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (432)
T 1vcl_A 295 MVGCDQNGKV--SQQISNTISFSST----VTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCD 368 (432)
T ss_dssp EEEEETTSCC--EEEECCEEECSSC----CCHHHHHHHHHHHHHCCEETTEECCHHHHHHHHHHHHTTCSCCCCEEEECC
T ss_pred ccccCCCCcE--EEeccceEEEecc----ccccEEEEEEEeeccceEEEEEEeecccchhhhhhhccCCCCcEEEEEecC
Confidence 3444445665 4777777665432 222 67899999999999999999999988653 3588998753
Q ss_pred ccCCcccccceeEEEEcCcEEEEEeEeecCCC
Q 008293 328 YVDGWTTFNTATFAVVGQGFVAVNITFRNTAG 359 (571)
Q Consensus 328 ~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g 359 (571)
. +.++.+.++|-.|++++-|-|--++
T Consensus 369 ~------~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (432)
T 1vcl_A 369 N------YDSDEEFTRGCMWQLAIETTEVKSG 394 (432)
T ss_dssp B------CTTSSBCSSEEEEEEEEEEEETTTT
T ss_pred C------CcccChhhccceEEEeeeeeecccC
Confidence 2 4578899999999999999876554
No 66
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=23.68 E-value=1.3e+02 Score=32.11 Aligned_cols=79 Identities=18% Similarity=0.140 Sum_probs=52.4
Q ss_pred EEEcCcEEEEEeEeecCCCCCccceee-e-ecCCCceEEEeceeecccceeeccCC-------------ceeeeecEEee
Q 008293 341 AVVGQGFVAVNITFRNTAGPTKHQAVA-V-RNGADKSTFYSCSFEGYQDTLYAHSL-------------RQFYRDCDIYG 405 (571)
Q Consensus 341 ~v~~~~f~~~~lt~~Nt~g~~~~qAvA-l-~~~~d~~~~~~c~~~g~QDTl~~~~~-------------r~~~~~c~I~G 405 (571)
.+..+++.++|++|.|... .++ . .....++.+.||.|.| .+.|....+ .-.|++|.+++
T Consensus 171 ~i~s~nV~I~n~~I~~gdd-----giGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~n 244 (464)
T 1h80_A 171 LHWSRNGIIERIKQNNALF-----GYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCSK 244 (464)
T ss_dssp EEEEEEEEEEEEEEESCCT-----TCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEES
T ss_pred eeeccCEEEeceEEecCCC-----eEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEEC
Confidence 4567888899999987642 223 2 2346789999999998 667655433 22799999987
Q ss_pred ccc-eeecc-----ceEEEeeceeee
Q 008293 406 TID-FIFGN-----AAVVFQNCNMYP 425 (571)
Q Consensus 406 ~vD-fIfG~-----~~avf~~c~i~~ 425 (571)
.-- ++++. ....|+|.+...
T Consensus 245 v~~~I~I~p~~~~isnItfeNI~~t~ 270 (464)
T 1h80_A 245 GLAAVMFGPHFMKNGDVQVTNVSSVS 270 (464)
T ss_dssp SSEEEEEECTTCBCCCEEEEEEEEES
T ss_pred CceeEEEeCCCceEeEEEEEEEEEEc
Confidence 422 34442 356777777664
No 67
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=21.28 E-value=3.4e+02 Score=22.26 Aligned_cols=33 Identities=6% Similarity=-0.016 Sum_probs=28.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008293 92 TSYLSTIRALEDCSLLAGMNVDSLSHASNTINS 124 (571)
Q Consensus 92 ~~d~~~k~AL~DC~ely~daid~L~~S~~~l~~ 124 (571)
.++..+..||+.|.+-|-++-..+.+.+..+..
T Consensus 55 ~L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~q~~~q 87 (95)
T 3dxr_B 55 ELNKNESSCLDRCVAKYFETNVQVGENMQKMGQ 87 (95)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999888887653
No 68
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=20.92 E-value=1.3e+02 Score=22.72 Aligned_cols=30 Identities=7% Similarity=-0.078 Sum_probs=26.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008293 92 TSYLSTIRALEDCSLLAGMNVDSLSHASNT 121 (571)
Q Consensus 92 ~~d~~~k~AL~DC~ely~daid~L~~S~~~ 121 (571)
.++..+..|++.|.+-|-++-..+.+.+..
T Consensus 33 ~L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~ 62 (64)
T 3cjh_B 33 NLSSQEEQCLSNCVNRFLDTNIRIVNGLQN 62 (64)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478899999999999999998888777654
Done!