Query 008300
Match_columns 570
No_of_seqs 176 out of 953
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 22:56:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nxc_A Mannosyl-oligosaccharid 100.0 5E-141 2E-145 1147.4 37.0 431 101-539 10-471 (478)
2 1x9d_A Endoplasmic reticulum m 100.0 1E-140 3E-145 1154.5 33.8 442 83-536 47-537 (538)
3 1hcu_A Alpha-1,2-mannosidase; 100.0 2E-139 6E-144 1141.4 30.8 421 102-537 6-496 (503)
4 2ri9_A Mannosyl-oligosaccharid 100.0 1E-138 4E-143 1129.2 33.3 411 108-534 2-474 (475)
5 1dl2_A Class I alpha-1,2-manno 100.0 2E-136 8E-141 1117.8 29.0 419 108-538 2-499 (511)
6 2gz6_A N-acetyl-D-glucosamine 98.3 1.4E-05 4.6E-10 83.3 16.1 274 177-476 54-342 (388)
7 2ahf_A Unsaturated glucuronyl 97.9 0.00026 8.8E-09 74.9 18.0 286 177-508 43-365 (377)
8 3gt5_A N-acetylglucosamine 2-e 97.8 0.00019 6.6E-09 75.8 14.3 303 150-476 12-348 (402)
9 2zzr_A Unsaturated glucuronyl 97.6 0.00059 2E-08 72.7 14.6 252 177-477 69-349 (397)
10 1fp3_A N-acyl-D-glucosamine 2- 97.6 0.00076 2.6E-08 70.7 14.6 270 178-476 58-352 (402)
11 2gz6_A N-acetyl-D-glucosamine 97.5 0.0041 1.4E-07 64.5 18.7 250 201-475 13-275 (388)
12 3gt5_A N-acetylglucosamine 2-e 97.5 0.0028 9.4E-08 66.9 17.1 246 246-507 55-319 (402)
13 2zbl_A Putative isomerase; N-a 97.4 0.0024 8.2E-08 67.8 15.6 275 177-476 52-354 (421)
14 1nc5_A Hypothetical protein YT 97.3 0.0077 2.6E-07 63.0 17.7 259 177-486 42-329 (373)
15 3pmm_A Putative cytoplasmic pr 97.1 0.0062 2.1E-07 64.3 14.5 244 150-418 87-339 (382)
16 3k7x_A LIN0763 protein; Q92DQ0 97.0 0.00041 1.4E-08 72.4 5.0 145 184-347 100-250 (349)
17 1nc5_A Hypothetical protein YT 97.0 0.0025 8.6E-08 66.8 10.9 100 182-293 93-195 (373)
18 2ahf_A Unsaturated glucuronyl 97.0 0.008 2.7E-07 63.5 14.4 217 180-412 92-323 (377)
19 2zzr_A Unsaturated glucuronyl 96.9 0.011 3.6E-07 63.0 14.1 225 180-422 118-362 (397)
20 1x9d_A Endoplasmic reticulum m 96.8 0.0091 3.1E-07 65.8 13.5 218 261-513 85-317 (538)
21 3k7x_A LIN0763 protein; Q92DQ0 96.7 0.0092 3.1E-07 62.2 12.1 245 181-476 51-304 (349)
22 1dl2_A Class I alpha-1,2-manno 96.7 0.01 3.5E-07 65.1 12.2 231 261-513 2-257 (511)
23 2ri9_A Mannosyl-oligosaccharid 96.4 0.013 4.6E-07 63.7 10.9 180 139-326 241-451 (475)
24 1nxc_A Mannosyl-oligosaccharid 96.2 0.06 2.1E-06 58.6 14.5 219 264-513 20-253 (478)
25 1hcu_A Alpha-1,2-mannosidase; 95.9 0.012 4.1E-07 64.5 7.3 183 139-326 254-470 (503)
26 2zbl_A Putative isomerase; N-a 95.7 0.47 1.6E-05 50.1 18.7 252 197-476 13-291 (421)
27 3k11_A Putative glycosyl hydro 94.3 0.24 8.3E-06 53.4 11.6 216 178-417 147-370 (445)
28 1fp3_A N-acyl-D-glucosamine 2- 94.2 2.4 8.1E-05 43.9 18.8 243 203-475 21-285 (402)
29 3pmm_A Putative cytoplasmic pr 92.4 2.3 7.9E-05 44.6 15.3 196 246-479 71-280 (382)
30 3k11_A Putative glycosyl hydro 86.4 6 0.0002 42.5 12.8 269 185-479 16-311 (445)
31 2v8i_A Pectate lyase; periplas 85.4 1.7 6E-05 46.9 7.8 100 197-296 2-116 (543)
32 1kwf_A Endoglucanase A; hydrol 83.1 4.6 0.00016 42.2 9.8 137 139-292 72-232 (363)
33 2v8i_A Pectate lyase; periplas 82.4 0.53 1.8E-05 50.8 2.4 142 114-285 317-468 (543)
34 3e6u_A LANC-like protein 1; al 74.7 7.5 0.00026 40.9 8.4 115 185-325 240-355 (411)
35 1v5d_A Chitosanase; chitosan d 74.3 12 0.00042 39.2 9.9 132 150-291 94-248 (386)
36 1wu4_A Xylanase Y; (alpla/alph 72.8 15 0.00053 38.7 10.2 146 139-297 79-252 (396)
37 3e6u_A LANC-like protein 1; al 65.4 1.3E+02 0.0046 31.2 19.9 267 156-473 55-324 (411)
38 1wzz_A Probable endoglucanase; 65.3 18 0.0006 37.3 8.5 146 139-296 58-224 (334)
39 3ren_A Glycosyl hydrolase, fam 48.4 14 0.00049 38.4 4.4 67 443-510 119-185 (350)
40 2g0d_A Nisin biosynthesis prot 43.9 15 0.00051 38.0 3.7 110 194-325 225-345 (409)
41 3nnb_A Alginate lyase; structu 43.7 11 0.00037 39.7 2.7 62 213-277 75-136 (382)
42 1wzz_A Probable endoglucanase; 43.1 40 0.0014 34.6 6.8 95 379-481 114-211 (334)
43 1r76_A Pectate lyase; A-helica 41.8 78 0.0027 33.6 8.8 106 194-305 75-212 (408)
44 3qxf_A Endoglucanase; cellulas 40.8 65 0.0022 33.5 8.0 138 140-293 44-205 (355)
45 1rh5_C Secbeta; protein transl 38.8 21 0.00071 27.3 2.8 44 1-44 1-46 (53)
46 3eu8_A Putative glucoamylase; 38.2 72 0.0024 34.1 7.9 96 194-297 18-121 (430)
47 3ren_A Glycosyl hydrolase, fam 36.0 99 0.0034 32.1 8.4 136 142-297 75-224 (350)
48 2b4j_C PC4 and SFRS1 interacti 35.8 29 0.00099 29.8 3.6 47 441-487 50-96 (98)
49 2g0d_A Nisin biosynthesis prot 33.7 25 0.00086 36.3 3.5 65 185-270 288-352 (409)
50 1h12_A Endo-1,4-beta-xylanase; 32.3 85 0.0029 33.1 7.3 137 139-296 87-262 (405)
51 3h7l_A Endoglucanase; dehydrog 32.2 43 0.0015 37.2 5.2 86 182-275 309-395 (586)
52 1gxm_A Pectate lyase; mechanis 31.0 1.1E+02 0.0039 31.5 7.8 103 196-305 23-134 (332)
53 1wu4_A Xylanase Y; (alpla/alph 28.8 99 0.0034 32.5 7.1 84 392-482 151-242 (396)
54 3qxf_A Endoglucanase; cellulas 26.8 85 0.0029 32.7 6.0 91 379-481 103-197 (355)
55 1kwf_A Endoglucanase A; hydrol 24.0 1.3E+02 0.0045 31.0 6.9 92 379-479 128-223 (363)
No 1
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=100.00 E-value=5.4e-141 Score=1147.37 Aligned_cols=431 Identities=41% Similarity=0.770 Sum_probs=404.7
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhHhhccCchhhhH-------------------------HHHhcCCCCCChhHHHH
Q 008300 101 AFAEDPIDIQRKQKVKDAMIHAWSSYEKYAWGQDELQL-------------------------LYSMCLFWRISDYSFSS 155 (570)
Q Consensus 101 ~~~~~~~~~~r~~~Vk~aF~haw~~Y~k~Awg~DEL~P-------------------------L~IMgl~~~~~~eEF~~ 155 (570)
..+.++...+||++||+||+|||++|++||||||||+| |||||+ ++||++
T Consensus 10 ~~~~~~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEl~P~S~~g~~~~~fg~~~g~TlVDsLDTL~IMgl-----~~Ef~~ 84 (478)
T 1nxc_A 10 REPADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGM-----KTEFQE 84 (478)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEETTTTEEECCGGGTTCCCHHHHHHHHHHHHTTC-----HHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCcCCCccCCcccchheecccceeecCC-----HHHHHH
Confidence 34567788899999999999999999999999999999 999999 999999
Q ss_pred HHHHHHhhcCCCCCccccccchhhhhccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCC
Q 008300 156 EFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSW 235 (570)
Q Consensus 156 A~~~V~~~ldF~~~~~VsvFEttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~ 235 (570)
|++||.++++|+++..|||||||||+||||||||+||+|++||+||+||||+||||||||||||+++||+++|.+.++.|
T Consensus 85 A~~~v~~~l~f~~~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~ 164 (478)
T 1nxc_A 85 AKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPW 164 (478)
T ss_dssp HHHHHHHHCCCCCSSEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTT
T ss_pred HHHHHHhhcCccCCCccchhheehhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887777
Q ss_pred CC-CCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecccCchHHHHH
Q 008300 236 TG-GESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYL 314 (570)
Q Consensus 236 ~~-~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYL 314 (570)
.. +++++||+||++|||++|||+||||+|+++|+++++.|++..+.+||+|++||+.+|+|.+..+++||++|||||||
T Consensus 165 ~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYL 244 (478)
T 1nxc_A 165 ASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYL 244 (478)
T ss_dssp SGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHH
T ss_pred cCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHH
Confidence 63 57899999999999999999999999999999999999998778999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcccccHHHHHHHHHHHHHhhcccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchH
Q 008300 315 LKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEK 394 (570)
Q Consensus 315 LK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLG~~~~~~~~~~~ 394 (570)
+|+|+|+|+.+ ++| ++||.+||++|+++|.+..+++++|+++..++.+.++|+||+||+|||++||++..+....++
T Consensus 245 lK~~il~g~~d--~~~-~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~ 321 (478)
T 1nxc_A 245 LKAWLMSDKTD--LEA-KKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQH 321 (478)
T ss_dssp HHHHHHTTTCC--HHH-HHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHH
T ss_pred HHHHHHcCCch--HHH-HHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHH
Confidence 99999999988 889 999999999999987666678999999998888999999999999999999998876556789
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCccceeEeecCCCc---cccccCCCCCchhHHHHHHhHHhhcCCchHHHHHHHHHHHHH
Q 008300 395 FLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQD---MSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFE 471 (570)
Q Consensus 395 ~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~---~~~~~~~y~LRPE~IESlfyLyR~TgD~~Yre~gW~if~ai~ 471 (570)
++++|++|++||+++|.++|||++||+|.|+.+.. ..+.+++|+||||+|||+|||||+||||+||||||+||++|+
T Consensus 322 ~l~~a~~l~~tC~~~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~ 401 (478)
T 1nxc_A 322 YLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALE 401 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999986532 346788999999999999999999999999999999999999
Q ss_pred HhcccCcCccccccCCC--CCCCCCcchHHHHHHHHHHHHhcCCCCccCCCCeeeccCCCccccccCCCC
Q 008300 472 KNSRIESGYVGLKDVNT--GDKDNMMQSFFLAETLKYLYLLFSPTTVISLDEWVFNTEAHPLKIVTQHDG 539 (570)
Q Consensus 472 ~~~r~~~Gya~i~dV~~--~~~~D~meSFflaETLKYLYLLFsd~~~isLd~~VFnTEaHPl~i~~~~~~ 539 (570)
++|||+|||++|+||++ +.++|+|||||||||||||||||||+++++||+||||||||||||......
T Consensus 402 k~~r~~~G~a~i~dV~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~ld~~VFnTEAHPl~i~~~~~~ 471 (478)
T 1nxc_A 402 SHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPILREQKK 471 (478)
T ss_dssp HHTEETTEECCBSCTTSSSCCBCCCBCHHHHHTHHHHHHHHTSCTTSSCTTTEEECTTSCEEECCC----
T ss_pred HHhhcccccccccccCCCCCCcCCCCCchHHHHHHHHHHeeccCCccCCCCCeeecCCCCceecCCCCcc
Confidence 99999999999999985 456999999999999999999999999999999999999999999876544
No 2
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=100.00 E-value=9.5e-141 Score=1154.48 Aligned_cols=442 Identities=41% Similarity=0.730 Sum_probs=394.1
Q ss_pred CCcccccccccCCCCCCCCC-C------------CChhHHHHHHHHHHHHHHHHHHhHhhccCchhhhH-----------
Q 008300 83 VIGKIDHIKQAKQPPGNKAF-A------------EDPIDIQRKQKVKDAMIHAWSSYEKYAWGQDELQL----------- 138 (570)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~r~~~Vk~aF~haw~~Y~k~Awg~DEL~P----------- 138 (570)
.+|++++++|+.+++..+.. + ....+.+||++||+||+|||++|++||||||||+|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~Vk~~F~haW~~Y~~~Awg~DEL~PlS~~g~d~fg~ 126 (538)
T 1x9d_A 47 WRGAVIEPEQGTELPSRRAEVPTKPPLPPARTQGTPVHLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGL 126 (538)
T ss_dssp -------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCTTSSEEETTTTEEECSSSS
T ss_pred ccCcccccccccCCccccccccccCcccCCccccCCccHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCcccccCC
Confidence 37899999998876665321 1 11236689999999999999999999999999999
Q ss_pred ----------HHHhcCCCCCChhHHHHHHHHHHhhcCCCCCccccccchhhhhccccceeeccCCChHHHHHHHHHHHHH
Q 008300 139 ----------LYSMCLFWRISDYSFSSEFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRL 208 (570)
Q Consensus 139 ----------L~IMgl~~~~~~eEF~~A~~~V~~~ldF~~~~~VsvFEttIRvLGGLLSAY~LSgd~~lL~KA~dLadrL 208 (570)
|||||+ ++||++|++||.++++|+++..|||||||||+||||||||+||+|++||+||+||||+|
T Consensus 127 g~TLVDSLDTL~IMgl-----~~EF~~A~~~V~~~~~f~~d~~VsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLadrL 201 (538)
T 1x9d_A 127 GLTLIDALDTMWILGL-----RKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRL 201 (538)
T ss_dssp CHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHCCCCSSCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ceeeeeccceeeecCC-----HHHHHHHHHHHHHhcCCCCCceeehhheehhhhhhhhhHHHhcCCHHHHHHHHHHHHHH
Confidence 999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC-CCCCCcce
Q 008300 209 LPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF-PADGLLPI 287 (570)
Q Consensus 209 LpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~ 287 (570)
|||||||||||+++||+++|.+.++.|.. .+++||+||++|||++||++||||+|+++|++|++.|++.. +.+||+|+
T Consensus 202 lpAFdTptgiP~~~vnl~~g~~~~~~~~~-~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~GL~p~ 280 (538)
T 1x9d_A 202 MPAFRTPSKIPYSDVNIGTGVAHPPRWTS-DSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPM 280 (538)
T ss_dssp GGGGCSTTSCCCSEEETTTCCEECCTTCS-EEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCS
T ss_pred HHhhcCCCCCCcceeeecccccCCCCcCC-CceeccccceeeeHHHHHHHhCCcHHHHHHHHHHHHHHhcccCCCCCcce
Confidence 99999999999999999999887777764 58999999999999999999999999999999999999977 78999999
Q ss_pred EecCCCCCCCCC-eeeecccCchHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhc-ccCCCCCeeeeccCCCcc
Q 008300 288 YISPDRGTPSYS-TITFGAMGDSFYEYLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVR-RSTPSSFTYICEKNGDSL 365 (570)
Q Consensus 288 ~id~~tg~~~~~-~~t~Ga~~DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~-~~~~~~~~~v~~~~g~~~ 365 (570)
+||+.+|+|+.. .+++||++|||||||+|+|+|+|+.+ ++| ++||.+||++|+++|. ++.+.+++|+++..++.+
T Consensus 281 ~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d--~~y-~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~ 357 (538)
T 1x9d_A 281 FINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQE--TQL-LEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRF 357 (538)
T ss_dssp EEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCC--HHH-HHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEE
T ss_pred EEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCch--HHH-HHHHHHHHHHHHHHhccCCCCCCceEEEeccCCcc
Confidence 999999999988 99999999999999999999999988 889 9999999999999664 454778999999988889
Q ss_pred cccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccceeEeecCC-----Cc--cccccCCCC
Q 008300 366 IDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDG-----QD--MSVGTSWNI 438 (570)
Q Consensus 366 ~~~m~hLsCF~pGmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~-----~~--~~~~~~~y~ 438 (570)
.++|+||+||+|||++||++... +++++++|++|++||+++|.+++||++||+|.|+.. ++ +.+.+++|+
T Consensus 358 ~~~~~hL~cF~gG~~aLgg~~~~---~~~~l~~a~~L~~tC~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~ 434 (538)
T 1x9d_A 358 SAKMDHLVCFLPGTLALGVYHGL---PASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNL 434 (538)
T ss_dssp ECEEEGGGGHHHHHHHHHHHTTC---CHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBC
T ss_pred CcccchHhhhhhhHHHhcCcccC---cHHHHHHHHHHHHHHHHHHHhcccCCCceEEEeccCCCccccceeeeccCcccC
Confidence 99999999999999999998654 578999999999999999999999999999999863 11 346789999
Q ss_pred CchhHHHHHHhHHhhcCCchHHHHHHHHHHHHHHhcccCcC-ccccccCCC---CCCCCCcchHHHHHHHHHHHHhcCCC
Q 008300 439 LRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG-YVGLKDVNT---GDKDNMMQSFFLAETLKYLYLLFSPT 514 (570)
Q Consensus 439 LRPE~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~~~G-ya~i~dV~~---~~~~D~meSFflaETLKYLYLLFsd~ 514 (570)
||||+|||+|||||+||||+||||||+||++|+++|||+|| |++|+||++ +.++|+|||||||||||||||||||+
T Consensus 435 LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Ggya~i~dV~~~~~~~~~D~mESFfLAETLKYlYLLFsd~ 514 (538)
T 1x9d_A 435 LRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDD 514 (538)
T ss_dssp CCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSCBCCBSCTTCSSCCCBCSCBCHHHHHTHHHHHHHHHCCC
T ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCCccccccccCCCCCCcCCCcccHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999 999999987 56799999999999999999999999
Q ss_pred -CccCCCCeeeccCCCccccccC
Q 008300 515 -TVISLDEWVFNTEAHPLKIVTQ 536 (570)
Q Consensus 515 -~~isLd~~VFnTEaHPl~i~~~ 536 (570)
++++||+||||||||||||+..
T Consensus 515 ~~~i~Ld~~VFNTEAHPl~i~~~ 537 (538)
T 1x9d_A 515 PNLLSLDAYVFNTEAHPLPIWTP 537 (538)
T ss_dssp -CCSCTTTEEECTTSCEEECC--
T ss_pred CCcCcCCCeeecCCCccccCCCC
Confidence 9999999999999999999764
No 3
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=100.00 E-value=1.8e-139 Score=1141.37 Aligned_cols=421 Identities=30% Similarity=0.515 Sum_probs=390.8
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHhHhhccCchhhhH----------------------HHHhcCCCCCChhHHHHHHHH
Q 008300 102 FAEDPIDIQRKQKVKDAMIHAWSSYEKYAWGQDELQL----------------------LYSMCLFWRISDYSFSSEFMW 159 (570)
Q Consensus 102 ~~~~~~~~~r~~~Vk~aF~haw~~Y~k~Awg~DEL~P----------------------L~IMgl~~~~~~eEF~~A~~~ 159 (570)
.+..+.+.+||++||+||+|||++|++||||||||+| |||||+ ++||++|++|
T Consensus 6 ~~~~~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~d~~gg~g~TlVDsLDTL~IMgl-----~~Ef~~A~~~ 80 (503)
T 1hcu_A 6 TKRGSPNPTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNGWGSSAIDGLDTAILMGD-----ADIVNTILQY 80 (503)
T ss_dssp -CBCCCCHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHTTC-----HHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHhCCCccccccCcCCccCCCCCcceeehhhccchhhcCC-----HHHHHHHHHH
Confidence 3455678899999999999999999999999999999 999999 9999999999
Q ss_pred HHhhcCCCC----CccccccchhhhhccccceeeccCCCh------------HHHHHHHHHHHHHhhcccCCCCCCccee
Q 008300 160 IANSLDFNK----SYDASVFETTIRVVGGLLSAYDLSGDK------------VFLEKARDIADRLLPAWNTRTGIPYNVI 223 (570)
Q Consensus 160 V~~~ldF~~----~~~VsvFEttIRvLGGLLSAY~LSgd~------------~lL~KA~dLadrLLpAFdTptGiP~~~v 223 (570)
|. +++|++ +..|||||||||+||||||||+||+|+ +||+||+||||+||||||||||||+++|
T Consensus 81 v~-~l~f~~~~~~~~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~v 159 (503)
T 1hcu_A 81 VP-QINFTTTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTV 159 (503)
T ss_dssp GG-GCCTTCCSSTTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEE
T ss_pred HH-hCCCCcccccCCccchheeehhhHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCccee
Confidence 97 699998 889999999999999999999999995 9999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC----CCCCCcceEecCCCCCCCCC
Q 008300 224 NLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF----PADGLLPIYISPDRGTPSYS 299 (570)
Q Consensus 224 Nl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~----~~~GL~p~~id~~tg~~~~~ 299 (570)
|+++|.+ .|..+++++||+||++|||++||++||||+|+++|++|++.|++.+ +.+||+|++||+.+|+|++.
T Consensus 160 nl~~~~~---~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~ 236 (503)
T 1hcu_A 160 FFNPTVR---RSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDS 236 (503)
T ss_dssp ECSSSCE---ECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCC
T ss_pred ecccCCC---CCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCC
Confidence 9999654 3444678999999999999999999999999999999999999954 37999999999999999999
Q ss_pred eeeecccCchHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhccc--CCCCCeeeeccCCCcccccccccccccc
Q 008300 300 TITFGAMGDSFYEYLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRS--TPSSFTYICEKNGDSLIDKMDELACFAP 377 (570)
Q Consensus 300 ~~t~Ga~~DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~--~~~~~~~v~~~~g~~~~~~m~hLsCF~p 377 (570)
.+++||++|||||||+|+|+|+|+.+ +.| ++||.+||++|+++|.+. .+.+++|+++.+++.+.++|+||+||+|
T Consensus 237 ~~~~Ga~~DS~YEYLlK~~il~g~~~--~~y-~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~ 313 (503)
T 1hcu_A 237 SGSWSGLMDSFYEYLIKMYLYDPVAF--AHY-KDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGG 313 (503)
T ss_dssp EECSSTTTHHHHHHHHHHHHHCTTTT--HHH-HHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHH
T ss_pred eeeecCCCccHHHHHHHHHHHcCCch--HHH-HHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhh
Confidence 99999999999999999999999988 889 999999999999976543 3568999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccceeEeecCCC------------------ccccccCCCCC
Q 008300 378 GMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQ------------------DMSVGTSWNIL 439 (570)
Q Consensus 378 GmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~------------------~~~~~~~~y~L 439 (570)
||++|||+..+ .++++++|++|++||+++|.+||||++||+|.|..+. ++.+.+++|+|
T Consensus 314 G~~aLgg~~~~---~~~~~~~a~~L~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~L 390 (503)
T 1hcu_A 314 GNFILGGILLN---EQKYIDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYIL 390 (503)
T ss_dssp HHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCC
T ss_pred HHHHhcCcccc---cHHHHHHHHHHHHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccC
Confidence 99999997543 5789999999999999999999999999999997654 13455689999
Q ss_pred chhHHHHHHhHHhhcCCchHHHHHHHHHHHHHHhcccCcCccccccCCC---CCCCCCcchHHHHHHHHHHHHhcCCCCc
Q 008300 440 RPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNT---GDKDNMMQSFFLAETLKYLYLLFSPTTV 516 (570)
Q Consensus 440 RPE~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~~~Gya~i~dV~~---~~~~D~meSFflaETLKYLYLLFsd~~~ 516 (570)
|||+|||+|||||+||||+||||||+||++|+++|||+|||++|+||++ +.++|+|||||||||||||||||||+++
T Consensus 391 RPE~iES~fylyR~TgD~~yre~gw~if~ai~k~~r~~~Gya~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFsd~~~ 470 (503)
T 1hcu_A 391 RPETLESLYYAYRVTGDSKWQDLAWEALSAIEDACRAGSAYSSINDVTQANGGGASDDMESFWFAEALKYAYLIFAEESD 470 (503)
T ss_dssp CCHHHHHHHHHHHHHCBHHHHHHHHHHHHHHHHHHEETTEECCBSCTTSTTCSCBCSCBCHHHHHTHHHHHHHHHSCCCS
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhccCCcccccccCCCCCCcCCccchHHHHHHHHHHheeccCCcc
Confidence 9999999999999999999999999999999999999999999999987 6679999999999999999999999999
Q ss_pred cCC-----CCeeeccCCCccccccCC
Q 008300 517 ISL-----DEWVFNTEAHPLKIVTQH 537 (570)
Q Consensus 517 isL-----d~~VFnTEaHPl~i~~~~ 537 (570)
++| |+||||||||||||++..
T Consensus 471 i~L~~~~~d~~VFNTEAHPl~i~~~~ 496 (503)
T 1hcu_A 471 VQVQATGGNKFVFNTEAHPFSIRSSS 496 (503)
T ss_dssp SSCCTTSCCCEEECTTSCEEECCC--
T ss_pred cccccCCCCCeEEcCCCccccCCCcc
Confidence 999 999999999999998753
No 4
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=100.00 E-value=1.1e-138 Score=1129.17 Aligned_cols=411 Identities=33% Similarity=0.557 Sum_probs=385.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccCchhhhH----------------------HHHhcCCCCCChhHHHHHHHHHHhhcC
Q 008300 108 DIQRKQKVKDAMIHAWSSYEKYAWGQDELQL----------------------LYSMCLFWRISDYSFSSEFMWIANSLD 165 (570)
Q Consensus 108 ~~~r~~~Vk~aF~haw~~Y~k~Awg~DEL~P----------------------L~IMgl~~~~~~eEF~~A~~~V~~~ld 165 (570)
+.+||++||+||+|||++|++||||||||+| |+|||+ ++||++|++||. +++
T Consensus 2 ~~~r~~~Vk~~F~haw~~Y~~~Awg~DEl~PlS~~~~d~~gg~g~TlVDsLDTL~IMgl-----~~Ef~~a~~~v~-~~~ 75 (475)
T 2ri9_A 2 NQAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHADSRNGWGASAVDALSTAVIMGK-----ADVVNAILEHVA-DID 75 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHHTC-----HHHHHHHHHHHH-HCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCccCCCCCcceeehhhccchhhcCC-----HHHHHHHHHHHH-hCC
Confidence 4689999999999999999999999999999 999999 999999999997 599
Q ss_pred CCC-CccccccchhhhhccccceeeccC-CC-----------hHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCC
Q 008300 166 FNK-SYDASVFETTIRVVGGLLSAYDLS-GD-----------KVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHN 232 (570)
Q Consensus 166 F~~-~~~VsvFEttIRvLGGLLSAY~LS-gd-----------~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~ 232 (570)
|++ +..|||||||||+||||||||+|| +| ++||+||+||||+||||||||||||+++||+++|..
T Consensus 76 f~~~~~~vsvFETtIR~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~-- 153 (475)
T 2ri9_A 76 FSKTSDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGN-- 153 (475)
T ss_dssp TTCCSSCEEHHHHHHHHHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCB--
T ss_pred CCcCCCccchhheehHhHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCC--
Confidence 999 999999999999999999999999 77 799999999999999999999999999999998643
Q ss_pred CCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC-----CCCCCcceEecCCCCCCCCCeeeecccC
Q 008300 233 PSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF-----PADGLLPIYISPDRGTPSYSTITFGAMG 307 (570)
Q Consensus 233 ~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~-----~~~GL~p~~id~~tg~~~~~~~t~Ga~~ 307 (570)
|..+++++||+||++|||++||++||||+|+++|++|++.|++.+ +.+||+|++||+.+|+|++..+++||++
T Consensus 154 --~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~ 231 (475)
T 2ri9_A 154 --DGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGD 231 (475)
T ss_dssp --CCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTT
T ss_pred --cCCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCc
Confidence 344678999999999999999999999999999999999999865 4689999999999999999999999999
Q ss_pred chHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhcccC--CCCCeeeeccCCCcccccccccccccchhhhhhcC
Q 008300 308 DSFYEYLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRST--PSSFTYICEKNGDSLIDKMDELACFAPGMIALGSS 385 (570)
Q Consensus 308 DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~~--~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLG~~ 385 (570)
|||||||+|+|+|+|+.+ ++| ++||.+||++|+++|.+.+ +.+++|+++.+++.+.++|+||+||+|||++|||+
T Consensus 232 DS~YEYLlK~~il~g~~~--~~~-~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~ 308 (475)
T 2ri9_A 232 DSFYEYLIKMYVYDPKRF--ETY-KDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGT 308 (475)
T ss_dssp HHHHHHHHHHHHHCTTTT--HHH-HHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHH
T ss_pred chHHHHHHHHHHHcCCch--HHH-HHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhccc
Confidence 999999999999999998 889 9999999999999765543 56899999999999999999999999999999997
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccceeEeecCCCc------------cccccCCCCCchhHHHHHHhHHhh
Q 008300 386 GYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQD------------MSVGTSWNILRPETVESLFYLWRL 453 (570)
Q Consensus 386 ~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~------------~~~~~~~y~LRPE~IESlfyLyR~ 453 (570)
..+ .++++++|++|++||+++|.++|||++||+|.|..+.. +.+.+++|+||||+|||+|||||+
T Consensus 309 ~~~---~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~ 385 (475)
T 2ri9_A 309 VLD---RQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRV 385 (475)
T ss_dssp HHT---CHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHH
T ss_pred ccc---cHHHHHHHHHHHHHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHH
Confidence 543 57899999999999999999999999999999976532 234568999999999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHhcccCcCccccccCCC---CCCCCCcchHHHHHHHHHHHHhcCCCCccCC-----CCeeec
Q 008300 454 TGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNT---GDKDNMMQSFFLAETLKYLYLLFSPTTVISL-----DEWVFN 525 (570)
Q Consensus 454 TgD~~Yre~gW~if~ai~~~~r~~~Gya~i~dV~~---~~~~D~meSFflaETLKYLYLLFsd~~~isL-----d~~VFn 525 (570)
||||+||||||+||++|+++|||+|||++|+||++ +.++|+|||||||||||||||||||+++++| |+||||
T Consensus 386 TgD~~yr~~gw~~f~ai~k~~rt~~G~a~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~l~~~~~d~~VFN 465 (475)
T 2ri9_A 386 TGKEIYRDWVWNAFVAINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKNTFVYN 465 (475)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTBCSSSBCCBSCTTSGGGSSBBSCCCTHHHHTHHHHHHHTTSCCCTTSCCSTTCCSEEEC
T ss_pred hCCHHHHHHHHHHHHHHHHHHccccCCcccccccCCCCCCcCCccchHHHHHHHHHHHhcccCCcccccccCCCCCeEEc
Confidence 99999999999999999999999999999999987 6779999999999999999999999999999 999999
Q ss_pred cCCCccccc
Q 008300 526 TEAHPLKIV 534 (570)
Q Consensus 526 TEaHPl~i~ 534 (570)
||||||||.
T Consensus 466 TEAHPl~i~ 474 (475)
T 2ri9_A 466 TEAHPISVA 474 (475)
T ss_dssp TTSCEEECC
T ss_pred CCCCCCCCC
Confidence 999999986
No 5
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=100.00 E-value=2.4e-136 Score=1117.82 Aligned_cols=419 Identities=40% Similarity=0.641 Sum_probs=388.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccCchhhhH-------------------------HHHh---------cCCCCCChhHH
Q 008300 108 DIQRKQKVKDAMIHAWSSYEKYAWGQDELQL-------------------------LYSM---------CLFWRISDYSF 153 (570)
Q Consensus 108 ~~~r~~~Vk~aF~haw~~Y~k~Awg~DEL~P-------------------------L~IM---------gl~~~~~~eEF 153 (570)
..+||++||+||+|||++|++||||||||+| |+|| |+ ++||
T Consensus 2 ~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~~~~g~g~G~TlVDSLDTL~IM~~~~~~~~~gl-----~~Ef 76 (511)
T 1dl2_A 2 AGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEF-----EAEI 76 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECSSTTCCCCCTTHHHHHHHHHHHHHHCSSSHHHH-----HHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCCCccCCccceeeeecccceEEeccccccccCCc-----HHHH
Confidence 4689999999999999999999999999998 9999 99 9999
Q ss_pred HHHHHHHHhhcCCCCCccccccchhhhhccccceeeccC------CChHHHHHHHHHHHHHhhccc-CCCCCCcceeecC
Q 008300 154 SSEFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLS------GDKVFLEKARDIADRLLPAWN-TRTGIPYNVINLA 226 (570)
Q Consensus 154 ~~A~~~V~~~ldF~~~~~VsvFEttIRvLGGLLSAY~LS------gd~~lL~KA~dLadrLLpAFd-TptGiP~~~vNl~ 226 (570)
++|++||+++++|+++..|||||||||+||||||||+|| +|++||+||+||||||||||| ||||||+++||++
T Consensus 77 ~~A~~~V~~~l~F~~d~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~ 156 (511)
T 1dl2_A 77 QRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLH 156 (511)
T ss_dssp HHHHHHHHHTCCCCCSSEEEHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETT
T ss_pred HHHHHHHHHhcCCCCCceechhheehhhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecc
Confidence 999999999999999999999999999999999999999 999999999999999999999 9999999999999
Q ss_pred CCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC----CCCCCcceEecCCCCCCCCCeee
Q 008300 227 HGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF----PADGLLPIYISPDRGTPSYSTIT 302 (570)
Q Consensus 227 ~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~----~~~GL~p~~id~~tg~~~~~~~t 302 (570)
+|.+..+.|.++.+++||+||++|||++|||+||||+|+++|++|++.|++.. +.+||+|++||+++|+|.+..++
T Consensus 157 ~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~ 236 (511)
T 1dl2_A 157 SGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIR 236 (511)
T ss_dssp TCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBC
T ss_pred cCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeee
Confidence 99988888887889999999999999999999999999999999999999976 68999999999999999999999
Q ss_pred ecccCchHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhcc-cCCCCCeeeeccC---CCcccccccccccccch
Q 008300 303 FGAMGDSFYEYLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRR-STPSSFTYICEKN---GDSLIDKMDELACFAPG 378 (570)
Q Consensus 303 ~Ga~~DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~-~~~~~~~~v~~~~---g~~~~~~m~hLsCF~pG 378 (570)
+||++|||||||+|+|+|+ .+ ++| ++||.+||++|+++|.+ +.+.+++|+++.. ++.+.++|+||+||+||
T Consensus 237 lGa~~DS~YEYLlK~~il~--~d--~~y-~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG 311 (511)
T 1dl2_A 237 FGSRGDSFYEYLLKQYLLT--HE--TLY-YDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGG 311 (511)
T ss_dssp SSTTTHHHHHHHHHHHHHH--CC--HHH-HHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHH
T ss_pred ecCCCCcHHHHHHHHHHhc--CC--HHH-HHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhH
Confidence 9999999999999999999 44 678 99999999999997654 4467899999873 67788999999999999
Q ss_pred hhhhhcCCCCC--------CCchHHHHHHHHHHHHHHHhhhcCCCCccceeEeecCCC------------c--cccccCC
Q 008300 379 MIALGSSGYGP--------GDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQ------------D--MSVGTSW 436 (570)
Q Consensus 379 mlaLG~~~~~~--------~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~------------~--~~~~~~~ 436 (570)
|+|||+..... ...++++++|++|++||+++|.++|||++||++.|.... + +.+.+++
T Consensus 312 ~~aLg~~~~~~~~~a~~~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~ 391 (511)
T 1dl2_A 312 LLASGSTEGLSIHEARRRPFFSKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRH 391 (511)
T ss_dssp HHHHHHHTTCCHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCC
T ss_pred HHHhccccCCChhhhhhcccccHHHHHHHHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcc
Confidence 99999842211 123479999999999999999999999999999997542 1 3467899
Q ss_pred CCCchhHHHHHHhHHhhcCCchHHHHHHHHHHHHHHhcccCcC------ccccccCCCC--CCCCCcchHHHHHHHHHHH
Q 008300 437 NILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG------YVGLKDVNTG--DKDNMMQSFFLAETLKYLY 508 (570)
Q Consensus 437 y~LRPE~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~~~G------ya~i~dV~~~--~~~D~meSFflaETLKYLY 508 (570)
|+||||+|||+|||||+||||+||||||+||++|+++|||+|| |++|+||++. .++|+||||||||||||||
T Consensus 392 y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~G~~~~~gya~i~dV~~~~~~~~D~mESF~laETLKYlY 471 (511)
T 1dl2_A 392 NLQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLY 471 (511)
T ss_dssp BCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHEESTTCTTTCEECCEEESSSSSCEECSCCCHHHHHTHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccccCCccccccccccccccCCCCcCCCcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 9999999875 4599999999999999999
Q ss_pred HhcCCCCccCCCCeeeccCCCccccccCCC
Q 008300 509 LLFSPTTVISLDEWVFNTEAHPLKIVTQHD 538 (570)
Q Consensus 509 LLFsd~~~isLd~~VFnTEaHPl~i~~~~~ 538 (570)
||||| ++|||+||||||||||||.+...
T Consensus 472 LLFsd--~i~Ld~~VFNTEAHPl~i~~~~~ 499 (511)
T 1dl2_A 472 ILFLD--EFDLTKVVFNTEAHPFPVLDEEI 499 (511)
T ss_dssp HHTCS--CCCTTSEEECTTSCEEECCCHHH
T ss_pred HHccc--cccCCceeecCCCcceecCCCCc
Confidence 99999 89999999999999999986543
No 6
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.27 E-value=1.4e-05 Score=83.33 Aligned_cols=274 Identities=12% Similarity=0.049 Sum_probs=151.2
Q ss_pred hhhhhccccceeecc-CCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHH
Q 008300 177 TTIRVVGGLLSAYDL-SGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIAL 255 (570)
Q Consensus 177 ttIRvLGGLLSAY~L-Sgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~L 255 (570)
.+-|.|-.+.-||.. ++++.+++.|++.++.|+..+-.|.|--+..++ ..|.+... ...+-+-+-+.+-+..+
T Consensus 54 ~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d-~dg~~~~~-----~~~~~~~af~i~al~~~ 127 (388)
T 2gz6_A 54 LQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALT-RGGEPLVQ-----PYNIFSDCFAAMAFSQY 127 (388)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEEC-TTSCBCCC-----CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc-CCCCcccC-----CcchHHHHHHHHHHHHH
Confidence 778888889999998 899999999999999999986555664454444 23433221 12234455566778888
Q ss_pred HHHhCCchHHHHHHHHHHHHhhcC-CCCCCcceEecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCCCcccccHHH
Q 008300 256 SQRTGDPKYRQKAEKVIVELNKTF-PADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTSAVKPYSRDM 334 (570)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g~~d~~~~~~~~~ 334 (570)
.+.|||++|.+.|.++.+.+.+.. ...|++....+... .. -+..+.+ -.-+-|+..+-++|+. .| ++.
T Consensus 128 y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~--~~---~~~~~~~-~~~~all~l~~~t~d~----~~-~~~ 196 (388)
T 2gz6_A 128 ALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTR--PM---KALAVPM-ILANLTLEMEWLLPQE----TL-ENV 196 (388)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTC--------------CC--CC---EETHHHH-HHHHHHHHTGGGSCHH----HH-HHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCC--CC---CCCCHHH-HHHHHHHHHHHHcCCH----HH-HHH
Confidence 999999999999999999998854 23465433322111 11 1111111 1236667777777642 34 455
Q ss_pred HHHHHHHHHHhhcccCCCCCe--eeeccCCCcccccccccccccch-------hhh-hhcCCCCCCCchHHHHHHHHHHH
Q 008300 335 WETSMKGLLSLVRRSTPSSFT--YICEKNGDSLIDKMDELACFAPG-------MIA-LGSSGYGPGDSEKFLSLAEELAW 404 (570)
Q Consensus 335 y~~A~~~i~~ll~~~~~~~~~--~v~~~~g~~~~~~m~hLsCF~pG-------mla-LG~~~~~~~~~~~~l~lA~~L~~ 404 (570)
=.+.++.+.+.+.... .+.. +........-....+ -.-|| +|. ++... ..+++++.|+++++
T Consensus 197 A~~~~~~~~~~~~~~~-~g~~~e~~~~~w~~~~~~~~~---~~~pgh~~e~a~lL~~~~~~t----gd~~~~~~A~~~~~ 268 (388)
T 2gz6_A 197 LAATVQEVMGDFLDQE-QGLMYENVAPDGSHIDCFEGR---LINPGHGIEAMWFIMDIARRK----NDSKTINQAVDVVL 268 (388)
T ss_dssp HHHHHHHHHHTTEETT-TTEECSEECTTSCCCCSTTTT---EECHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-CCeEEEEECCCCCCCCCcccC---cCCCCHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHH
Confidence 5555555555443322 2221 222211100000011 12333 122 22211 24689999999998
Q ss_pred HHHHhhhcCCCCccceeEeecCCCccc---cccCCCCCchhHHHHHHhHHhhcCCchHHHHHHHHHHHHHHhccc
Q 008300 405 TCYNFYQSTPTKLAGENYFFRDGQDMS---VGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI 476 (570)
Q Consensus 405 tC~~~y~~t~tGl~PE~~~f~~~~~~~---~~~~~y~LRPE~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~ 476 (570)
.+.+.--...+|-.--.+.++ |+... ..++..----|.|=.+..+|++|||++|.+++-++++-+.++..-
T Consensus 269 ~~~~~g~d~~~Gg~~~~~~~~-g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~~D 342 (388)
T 2gz6_A 269 NILNFAWDNEYGGLYYFMDAA-GHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQHFAD 342 (388)
T ss_dssp HHHHHHBCTTTCSBCSCEETT-SCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHhccCCCCCEEEeecCC-CCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 875421111123222222222 21100 001100011377888889999999999999999999988888754
No 7
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.95 E-value=0.00026 Score=74.93 Aligned_cols=286 Identities=16% Similarity=0.086 Sum_probs=164.7
Q ss_pred hhhhhccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccch-hhHHHH
Q 008300 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQ-LELIAL 255 (570)
Q Consensus 177 ttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~-LEF~~L 255 (570)
|.-=..|+|.-+|++|||+.+++.|++-.++|.+...... | +...+.|-+. +=+..+
T Consensus 43 t~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~-------~---------------~~~HD~Gf~~~~s~~~~ 100 (377)
T 2ahf_A 43 TDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDRFE-------N---------------LDHHNIGFLYSLSAKAQ 100 (377)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTTT-------T---------------CCBSTHHHHHHTTHHHH
T ss_pred CcchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccc-------C---------------CCCCCchHhhHHHHHHH
Confidence 4455679999999999999999999999999987553211 1 1123455444 457889
Q ss_pred HHHhCCchHHHHHHHHHHHHhhcCCCC-CCcceEecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCCCcccccHHH
Q 008300 256 SQRTGDPKYRQKAEKVIVELNKTFPAD-GLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTSAVKPYSRDM 334 (570)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~~~~~~-GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g~~d~~~~~~~~~ 334 (570)
-++|||++|.+.+.++.+.|..+.++. |.+... +...+.-....+-+..+.- -+-|.+.+.++|+.+ | .+.
T Consensus 101 y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw-~~~~~~~~~~~~iID~mmn--i~~L~~A~~~~gd~~----y-~~~ 172 (377)
T 2ahf_A 101 WIVEKDESARKLALDAADVLMRRWRADAGIIQAW-GPKGDPENGGRIIIDCLLN--LPLLLWAGEQTGDPE----Y-RRV 172 (377)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCB-SSTTCTTTTTEEEGGGGGG--HHHHHHHHHHHCCTH----H-HHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCCCCCCeEEec-cCCCCCCCCceEEechHHH--HHHHHHHHHHhCCHH----H-HHH
Confidence 999999999999999999999865543 555542 2211110112333443332 567889999999754 5 554
Q ss_pred HHHHHHHHHHhhcccCCC-CCeee-eccCCCcc----ccccccc-------ccccchhhhhhcCCCCCCCchHHHHHHHH
Q 008300 335 WETSMKGLLSLVRRSTPS-SFTYI-CEKNGDSL----IDKMDEL-------ACFAPGMIALGSSGYGPGDSEKFLSLAEE 401 (570)
Q Consensus 335 y~~A~~~i~~ll~~~~~~-~~~~v-~~~~g~~~----~~~m~hL-------sCF~pGmlaLG~~~~~~~~~~~~l~lA~~ 401 (570)
=.++.+-+.+.+.+...+ -.++. +...|... ..-...- +.++=|.+.+=-.. ..+++|+.|++
T Consensus 173 A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T----~d~~yL~~A~~ 248 (377)
T 2ahf_A 173 AEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYL----GNADLLETAKR 248 (377)
T ss_dssp HHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHH----TCHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHH----CChHHHHHHHH
Confidence 455555555544442211 12222 11122211 1111111 22233333322111 25789999999
Q ss_pred HHHHHHHhhhcCCCCccceeEeecCCCccccccCCCCCchh-------HHHHHHhHHhhcC-----CchHHHHHHHHHHH
Q 008300 402 LAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILRPE-------TVESLFYLWRLTG-----NKTYKEWGWNIFQA 469 (570)
Q Consensus 402 L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~y~LRPE-------~IESlfyLyR~Tg-----D~~Yre~gW~if~a 469 (570)
+++.+.+.. |....| .+++.... -+.||. ++-.+.-|.++|+ +++|++.|.+++++
T Consensus 249 la~~~l~~~---~~d~~p-ywd~~~~~--------~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~ 316 (377)
T 2ahf_A 249 MARHFLARV---PEDGVV-YWDFEVPQ--------EPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTA 316 (377)
T ss_dssp HHHHHHTTC---CTTSSC-BSBTTSCC--------CTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhh---HHhCCc-ccccCCCc--------cCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHH
Confidence 998877654 322333 22222110 012221 3455777999996 78999999999999
Q ss_pred HHHhcccCcC---ccccccCCCCCC----CCC-c--chHHHHHHHHHHH
Q 008300 470 FEKNSRIESG---YVGLKDVNTGDK----DNM-M--QSFFLAETLKYLY 508 (570)
Q Consensus 470 i~~~~r~~~G---ya~i~dV~~~~~----~D~-m--eSFflaETLKYLY 508 (570)
+...+.+..| =.-|.++.-..+ .|. | --||+-|-|..|.
T Consensus 317 l~~~y~~~~~~~~~g~L~h~~~~~~~~~~~d~~~~ygDy~~~Eal~r~~ 365 (377)
T 2ahf_A 317 LRDGYAERDDGEAEGFIRRGSYHVRGGISPDDYTIWGDYYYLEALLRLE 365 (377)
T ss_dssp HHHHTBCCCCSSCCCSBSCBCSBTTTTBSSSBCBHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCeEEecccccCCCCCCCCcCccHHHHHHHHHHHHHH
Confidence 9998876532 222344321111 111 1 2357778877653
No 8
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.81 E-value=0.00019 Score=75.80 Aligned_cols=303 Identities=12% Similarity=0.070 Sum_probs=167.5
Q ss_pred hhHHHHHHHHH-HhhcC--------CCCCccc-cccc----hhhhhccccceeeccCCChHHHHHHHHHHHHHhhcccCC
Q 008300 150 DYSFSSEFMWI-ANSLD--------FNKSYDA-SVFE----TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTR 215 (570)
Q Consensus 150 ~eEF~~A~~~V-~~~ld--------F~~~~~V-svFE----ttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTp 215 (570)
..|.++++.+= ...+| ++.++.+ ..+| .+-|.|-++--||.+++++.+++.|+..++.|...+-.|
T Consensus 12 ~~~~~~~l~fw~~~~~D~~GGf~~~l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~ 91 (402)
T 3gt5_A 12 RTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNP 91 (402)
T ss_dssp HHHHHHHHHHHTTTTBCTTSSBCCEECTTSCEEESSEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHhcCCCCCcCeeeEECCCCCCCCCCchhHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccC
Confidence 45666666643 33333 1233442 3343 467999999999999999999999999999998865444
Q ss_pred C-CCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC--CCCCCcceEecCC
Q 008300 216 T-GIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF--PADGLLPIYISPD 292 (570)
Q Consensus 216 t-GiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~--~~~GL~p~~id~~ 292 (570)
. |--+..+ +.|.+.... ..+=.-+-+.+=+.. .+.|||+.|.+.|.++++.|.+.+ +..|++-...+++
T Consensus 92 ~~Gg~~~~~--~dG~~~~~~-----~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~ 163 (402)
T 3gt5_A 92 ATGGYAWTL--CDDRVEDDT-----NHCYGLAFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ 163 (402)
T ss_dssp TTSCBCSEE--ETTEEEECC-----EEHHHHHHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT
T ss_pred CCCcEEEEe--eCCCCCcCC-----cchHHHHHHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC
Confidence 4 4434333 555542111 111122223333444 456999999999999999998853 3457765545543
Q ss_pred CCCCCCCeeeecccC-chHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhcccCCCC-Ceeee-ccCCCcccccc
Q 008300 293 RGTPSYSTITFGAMG-DSFYEYLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRSTPSS-FTYIC-EKNGDSLIDKM 369 (570)
Q Consensus 293 tg~~~~~~~t~Ga~~-DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~~~~~-~~~v~-~~~g~~~~~~m 369 (570)
.. .... . +.++ --.-|-|+..+-++|+.. | .+.=.+.++.+.+.+....... ..++. +.+...-....
T Consensus 164 ~~--~~~~-~-~~n~~m~l~eall~L~~~tgd~~----~-~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~ 234 (402)
T 3gt5_A 164 WN--FTRY-R-GQNANMHMCEAMLAAYEASGEQR----Y-LERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRD 234 (402)
T ss_dssp CC--BCSC-E-EHHHHHHHHHHHHHHHHHHCCHH----H-HHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTT
T ss_pred CC--CCCC-C-CCCHHHHHHHHHHHHHHhhCCHH----H-HHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccC
Confidence 11 1111 0 1111 114688999999998643 5 5555555666655333221111 11222 11100000000
Q ss_pred cccc-----cccchhhh--------hhcCCCCCCCchHHHHHHHHHHHHHHHh-hhcCCCCccceeEeecCCCccccccC
Q 008300 370 DELA-----CFAPGMIA--------LGSSGYGPGDSEKFLSLAEELAWTCYNF-YQSTPTKLAGENYFFRDGQDMSVGTS 435 (570)
Q Consensus 370 ~hLs-----CF~pGmla--------LG~~~~~~~~~~~~l~lA~~L~~tC~~~-y~~t~tGl~PE~~~f~~~~~~~~~~~ 435 (570)
+.-. .+-||=.. ++... ..+.+++.|.+|++.+.+. ++. ..|..--.... .+........
T Consensus 235 ~~~~~~~~~~~~pGH~iE~awlLl~~~~~~----~~~~~~~~A~~l~~~~~~~gwd~-~~Gg~~~~~d~-~g~~~~~~k~ 308 (402)
T 3gt5_A 235 NPKHLFRPWGFQPGHQTEWAKLLLILDRYI----EVEWLVPVARSLFDVAVARSWDA-VRGGLCYGFAP-DGTICDDDKY 308 (402)
T ss_dssp STTCSSSCSSBCHHHHHHHHHHHHHHHHHC----CCTTHHHHHHHHHHHHHHHHBCT-TTCSBCSEECT-TSCEEECCEE
T ss_pred CcccccCcCCCCCChHHHHHHHHHHHHHhh----CcHHHHHHHHHHHHHHHHhcccC-CCCcEEEEEcC-CCCeeeCCcc
Confidence 0000 12333311 11111 1357999999999888653 332 22322111111 1111111112
Q ss_pred CCCCchhHHHHHHhHHhhcCCchHHHHHHHHHHHHHHhccc
Q 008300 436 WNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI 476 (570)
Q Consensus 436 ~y~LRPE~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~ 476 (570)
++. --|.|=.+..||++|||++|.+|+-++++-+.++..-
T Consensus 309 ~W~-qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~~~~D 348 (402)
T 3gt5_A 309 FWV-QAESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVD 348 (402)
T ss_dssp HHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC
T ss_pred eeH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 222 2488888999999999999999999999999888775
No 9
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.63 E-value=0.00059 Score=72.70 Aligned_cols=252 Identities=16% Similarity=0.102 Sum_probs=148.7
Q ss_pred hhhhhccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccch-hhHHHH
Q 008300 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQ-LELIAL 255 (570)
Q Consensus 177 ttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~-LEF~~L 255 (570)
|.-=..|+|.-+|++|||+.+++.|++-.++|.+..... +| +...++|-+. +=+..+
T Consensus 69 t~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~-------~~---------------~~~HD~GF~~~~s~~~~ 126 (397)
T 2zzr_A 69 TNGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRINNR-------IA---------------LDHHDLGFLYTPSCTAE 126 (397)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTT-------CS---------------CCSSTHHHHHTTTHHHH
T ss_pred CcchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhhhc-------cc---------------CCCCCchHHHHHHHHHH
Confidence 444467999999999999999999999999988755321 11 1123345444 337889
Q ss_pred HHHhCCchHHHHHHHHHHHHhhcC-CCCCCcceEecCCCCCCCCCeeeecccCchHH--HHHHHHHHhcCCCCCcccccH
Q 008300 256 SQRTGDPKYRQKAEKVIVELNKTF-PADGLLPIYISPDRGTPSYSTITFGAMGDSFY--EYLLKVWIQGNKTSAVKPYSR 332 (570)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfY--EYLLK~~iL~g~~d~~~~~~~ 332 (570)
-++|||++|.+.+.++.+.|..+. +..|.+... +...... ...+- .|.-. +-|.+.+.++|+.+ | .
T Consensus 127 y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqsw-~~~~~~~-~~~~i----ID~~mni~~L~~A~~~~gd~~----y-~ 195 (397)
T 2zzr_A 127 YRINGDVKALEATIKAADKLMERYQEKGGFIQAW-GELGYKE-HYRLI----IDCLLNIQLLFFAYEQTGDEK----Y-R 195 (397)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCS-SSTTCGG-GCEEE----TTHHHHTHHHHHHHHHHCCHH----H-H
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhCcCCCEEEec-ccCCCCC-CCcee----echHhHHHHHHHHHHHhCCHH----H-H
Confidence 999999999999999999999865 334555432 2221111 11222 23332 56788888888644 4 4
Q ss_pred HHHHHHHHHHHHhhcccCCC-CCeeeec-cCCCcc----ccccccc-------ccccchhhhhhcCCCCCCCchHHHHHH
Q 008300 333 DMWETSMKGLLSLVRRSTPS-SFTYICE-KNGDSL----IDKMDEL-------ACFAPGMIALGSSGYGPGDSEKFLSLA 399 (570)
Q Consensus 333 ~~y~~A~~~i~~ll~~~~~~-~~~~v~~-~~g~~~----~~~m~hL-------sCF~pGmlaLG~~~~~~~~~~~~l~lA 399 (570)
+.=.++.+-+.+++.+...+ -.++.-+ ..|... ..-...- +.++=|.+.+--.. ..+++|+.|
T Consensus 196 ~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T----~d~~yL~~A 271 (397)
T 2zzr_A 196 QVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKM----KDYQQIILF 271 (397)
T ss_dssp HHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHH----CCHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHH----CCHHHHHHH
Confidence 44444444455544432111 1222211 122211 1111111 22233444332211 247899999
Q ss_pred HHHHHHHHHhhhcCCCCccceeEeecCCCccccccCCCCCch-------hHHHHHHhHHhhcCC---ch--HHHHHHHHH
Q 008300 400 EELAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILRP-------ETVESLFYLWRLTGN---KT--YKEWGWNIF 467 (570)
Q Consensus 400 ~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~y~LRP-------E~IESlfyLyR~TgD---~~--Yre~gW~if 467 (570)
++|++.+.+.. |....| .|++.... -+.|| =++..+.-|.++|++ .+ |++.|.+++
T Consensus 272 ~~la~~~l~~~---~~d~~p-ywdt~~~~--------~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l 339 (397)
T 2zzr_A 272 KGMTNYFLNRL---PEDKVS-YWDLIFTD--------GSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTML 339 (397)
T ss_dssp HHHHHHHHHTC---CTTSCC-BSBTTCCT--------TSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh---HHhCCc-cccCCCCC--------CCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHH
Confidence 99988877654 333334 22322211 01122 134557779999998 88 999999999
Q ss_pred HHHHHhcccC
Q 008300 468 QAFEKNSRIE 477 (570)
Q Consensus 468 ~ai~~~~r~~ 477 (570)
+++...+.+.
T Consensus 340 ~~l~~~y~~~ 349 (397)
T 2zzr_A 340 RSLIEQYSNN 349 (397)
T ss_dssp HHHHHHTBCC
T ss_pred HHHHHHHhcc
Confidence 9999988664
No 10
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.59 E-value=0.00076 Score=70.68 Aligned_cols=270 Identities=12% Similarity=0.054 Sum_probs=143.6
Q ss_pred hhhhccccceeeccC---CChHHHHHHHHHHHHHhhcc-cCCC--CCCcceeecCCCCCCCCCCCCCCccccccccchhh
Q 008300 178 TIRVVGGLLSAYDLS---GDKVFLEKARDIADRLLPAW-NTRT--GIPYNVINLAHGNPHNPSWTGGESILADSGTEQLE 251 (570)
Q Consensus 178 tIRvLGGLLSAY~LS---gd~~lL~KA~dLadrLLpAF-dTpt--GiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LE 251 (570)
+-|.|=.+..||.+. +++.+|+.|+...+.|...+ |... |+- ..++ ..|.+... .-.+=+-+-+.+-
T Consensus 58 nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~-~s~d-~dg~~~~~-----~~~lyd~af~~~a 130 (402)
T 1fp3_A 58 QGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCA-FVLT-RDGRPVKV-----QRSIFSECFYTMA 130 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBC-SEEC-TTSCEEEC-----CSSSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceE-EEEC-CCCCcccc-----ccchHHHHHHHHH
Confidence 556688888888876 99999999999999999985 4444 443 3343 33332211 1112223345566
Q ss_pred HHHHHHHhCCchHHHHHHHHHHHHhhcC--CCCCCcceEecCCCCCCCCCeeeecccCchHHHHHHH---HHHhcCCCCC
Q 008300 252 LIALSQRTGDPKYRQKAEKVIVELNKTF--PADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLK---VWIQGNKTSA 326 (570)
Q Consensus 252 F~~LS~lTGd~kY~~~a~~i~~~L~~~~--~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK---~~iL~g~~d~ 326 (570)
+..+.+.|||+.|.+.|.++++.+.+.. ...|++.. .++ .+. ..-++++... --|-++. .+.+++
T Consensus 131 ~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~-~~~---~~~-~~~~~~~~m~-~~~~~l~l~~l~~~~~---- 200 (402)
T 1fp3_A 131 MNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRP-QLP---GAV-ASESMAVPMM-LLCLVEQLGEEDEELA---- 200 (402)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCC-CCT---TSC-CEEETHHHHH-HHHHHHHHHTTCHHHH----
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCc-ccc---Ccc-CCCCcchHHH-HHHHHHHHHHHHHhcC----
Confidence 8889999999999999999999888743 44576521 111 121 1112211111 1233343 222332
Q ss_pred cccccHHHHHHHHHHHHHhhcccCCCCC--eeeeccCCCcccccccccccccch-------hhhhhcCCCCCCCchHHHH
Q 008300 327 VKPYSRDMWETSMKGLLSLVRRSTPSSF--TYICEKNGDSLIDKMDELACFAPG-------MIALGSSGYGPGDSEKFLS 397 (570)
Q Consensus 327 ~~~~~~~~y~~A~~~i~~ll~~~~~~~~--~~v~~~~g~~~~~~m~hLsCF~pG-------mlaLG~~~~~~~~~~~~l~ 397 (570)
+.| .+.-.+.++.+.+. .... .+. .+++. +........+. -.-|| +|+-.+... +.+++++
T Consensus 201 -~~~-~~~a~~~~~~~~~~-~~~~-~~~~~e~~d~-dw~~~~~~~g~--~~~pgh~ie~~wlL~~a~~~~---~~~~~l~ 270 (402)
T 1fp3_A 201 -GRY-AQLGHWCARRILQH-VQRD-GQAVLENVSE-DGEELSGCLGR--HQNPGHALEAGWFLLRHSSRS---GDAKLRA 270 (402)
T ss_dssp -HHT-HHHHHHHHHHHHTT-EETT-TTEECSEEET-TSCBCCHHHHH--EECHHHHHHHHHHHHHHHHHT---TCHHHHH
T ss_pred -cHH-HHHHHHHHHHHHHH-hCcC-CCeEEEEECC-CCCccCCCCCC--CCCCCcHHHHHHHHHHHHHHc---CChHHHH
Confidence 123 34444444444443 2211 111 12211 00000000000 02233 233333322 2568999
Q ss_pred HHHHHHHHH-HH-hhhcCCCCccceeEeecCCCccc-cccCCCCCc--hhHHHHHHhHHhhcCCchHHHHHHHHHHHHHH
Q 008300 398 LAEELAWTC-YN-FYQSTPTKLAGENYFFRDGQDMS-VGTSWNILR--PETVESLFYLWRLTGNKTYKEWGWNIFQAFEK 472 (570)
Q Consensus 398 lA~~L~~tC-~~-~y~~t~tGl~PE~~~f~~~~~~~-~~~~~y~LR--PE~IESlfyLyR~TgD~~Yre~gW~if~ai~~ 472 (570)
.|+++++.+ .+ .+... +|-.--...+ +|+... ..+...... -|.|-.+..||++|||++|.+++-++++-+.+
T Consensus 271 ~A~~~~~~~~~~~~~d~~-~gg~~~~~~~-~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 271 HVIDTFLLLPFRSGWDAD-HGGLFYFQDA-DGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFR 348 (402)
T ss_dssp HHHHHHTHHHHHHHBCTT-TCSBCSCEET-TSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCC-CCCEEEeecC-CCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 999999887 43 33321 1322211122 122100 001111111 28899999999999999999999999999988
Q ss_pred hccc
Q 008300 473 NSRI 476 (570)
Q Consensus 473 ~~r~ 476 (570)
+..-
T Consensus 349 ~f~D 352 (402)
T 1fp3_A 349 QFRD 352 (402)
T ss_dssp HTBC
T ss_pred hCcC
Confidence 8864
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.50 E-value=0.0041 Score=64.46 Aligned_cols=250 Identities=10% Similarity=0.099 Sum_probs=135.4
Q ss_pred HHHHHHHHhhcc-----cCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHH-hCCchHHHHHHHHHHH
Q 008300 201 ARDIADRLLPAW-----NTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQR-TGDPKYRQKAEKVIVE 274 (570)
Q Consensus 201 A~dLadrLLpAF-----dTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~l-TGd~kY~~~a~~i~~~ 274 (570)
..+|.+.+||-| |. .|=.+.+++.. |.. .+. +--+=.-|-+..=|..+.+. ||||.|.++|+++.+.
T Consensus 13 ~~~l~~~~l~fw~~~~~D~-~GGf~~~~~~d-~~~-~~~----eK~l~~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~ 85 (388)
T 2gz6_A 13 KNALLNDVLPFWENHSLDS-EGGYFTCLDRQ-GKV-YDT----DKFIWLQNRQVWTFSMLCNQLEKRENWLKIARNGAKF 85 (388)
T ss_dssp HHHHHHTHHHHHHHHCBCT-TSSBCCEEBTT-SCE-EEC----CEEHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHhcCCCC-CCCEEeEECCC-CCc-CCc----chhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 356777777766 65 66666666553 221 111 11222334444557777888 8999999999999999
Q ss_pred Hhhc-CCCCCCcceEecCCCCCCCCC-eeeecccCchHH-HHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhcccCC
Q 008300 275 LNKT-FPADGLLPIYISPDRGTPSYS-TITFGAMGDSFY-EYLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRSTP 351 (570)
Q Consensus 275 L~~~-~~~~GL~p~~id~~tg~~~~~-~~t~Ga~~DSfY-EYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~~~ 351 (570)
|.+. ...+|-+-..+|.++ .+... .... ...|. .=|+..|..+|+.+ | .+.=.+..+.|.+++.. +
T Consensus 86 l~~~~~~~~Gg~~~~~d~dg-~~~~~~~~~~---~~af~i~al~~~y~~tg~~~----~-l~~A~~~~~~i~~~~~d--~ 154 (388)
T 2gz6_A 86 LAQHGRDDEGNWYFALTRGG-EPLVQPYNIF---SDCFAAMAFSQYALASGEEW----A-KDVAMQAYNNVLRRKDN--P 154 (388)
T ss_dssp HHHHSBCTTSCBCSEECTTS-CBCCCCCCHH---HHHHHHHHHHHHHHHHCCHH----H-HHHHHHHHHHHHTC------
T ss_pred HHHhcCCCCCCEEEEEcCCC-CcccCCcchH---HHHHHHHHHHHHHHHhCCHH----H-HHHHHHHHHHHHHHhcC--C
Confidence 9984 444555555666543 33221 1111 12222 12345566677543 4 44445555555554432 1
Q ss_pred CCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccceeEeecCCCccc
Q 008300 352 SSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQDMS 431 (570)
Q Consensus 352 ~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~ 431 (570)
.++ |.....+......++.-+..+-+++.|.... ..+++++.|+++++.+...+...+.|..+|.+.=+. +..
T Consensus 155 ~g~-~~~~~~~~~~~~~~~~~~~~~~all~l~~~t----~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w-~~~- 227 (388)
T 2gz6_A 155 KGK-YTKTYPGTRPMKALAVPMILANLTLEMEWLL----PQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDG-SHI- 227 (388)
T ss_dssp -----------CCCCEETHHHHHHHHHHHHTGGGS----CHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTS-CCC-
T ss_pred Ccc-cCcccCCCCCCCCCCHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCC-CCC-
Confidence 222 1111111111111222233444566665432 246899999999999988777667787777654221 110
Q ss_pred cccCCCCCch-hHHHH---HHhHHhhcCCchHHHHHHHHHHHHHHhcc
Q 008300 432 VGTSWNILRP-ETVES---LFYLWRLTGNKTYKEWGWNIFQAFEKNSR 475 (570)
Q Consensus 432 ~~~~~y~LRP-E~IES---lfyLyR~TgD~~Yre~gW~if~ai~~~~r 475 (570)
........-| ..+|. ++-++++|||++|++.|-++++.+.++.-
T Consensus 228 ~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~ 275 (388)
T 2gz6_A 228 DCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAW 275 (388)
T ss_dssp CSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHB
T ss_pred CCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 0010111222 24554 55566679999999999999999876543
No 12
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.47 E-value=0.0028 Score=66.92 Aligned_cols=246 Identities=13% Similarity=0.019 Sum_probs=131.3
Q ss_pred ccchhhHHHHHHHhCCchHHHHHHHHHHHHhhc-CCC--CCCcceEecCCCCCCCCCeeeecccCchHHHHHHHHHHhcC
Q 008300 246 GTEQLELIALSQRTGDPKYRQKAEKVIVELNKT-FPA--DGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGN 322 (570)
Q Consensus 246 GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~-~~~--~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g 322 (570)
|-++-=|....++||+|.|.++|+++.+.|.+. ... .|++-.. ..|++.... --.....|.=+-+-.|..+|
T Consensus 55 ~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~---~dG~~~~~~--~~lyd~Af~i~al~~~~~tg 129 (402)
T 3gt5_A 55 TRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTL---CDDRVEDDT--NHCYGLAFVMLAYSCGLKVG 129 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEE---ETTEEEECC--EEHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEe---eCCCCCcCC--cchHHHHHHHHHHHHHHHhC
Confidence 444455677778899999999999999999883 222 2444333 334332110 00111223322223355677
Q ss_pred CCCCcccccHHHHHHHHHHHHHhhcccCCCCCeeeeccCC-Cccc--ccccccccccchhhhhhcCCCCCCCchHHHHHH
Q 008300 323 KTSAVKPYSRDMWETSMKGLLSLVRRSTPSSFTYICEKNG-DSLI--DKMDELACFAPGMIALGSSGYGPGDSEKFLSLA 399 (570)
Q Consensus 323 ~~d~~~~~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~~~g-~~~~--~~m~hLsCF~pGmlaLG~~~~~~~~~~~~l~lA 399 (570)
+.+ + .+.=.+.++.|.+++..... +. |...... ..+. +.+..-...+-+++.|.... ..+++++.|
T Consensus 130 d~~----~-l~~A~~l~~~i~~~f~d~~~-G~-~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~t----gd~~~~~~a 198 (402)
T 3gt5_A 130 IKQ----A-REWMDETWCLLERHFWDAEY-GL-YKDEADAQWNFTRYRGQNANMHMCEAMLAAYEAS----GEQRYLERA 198 (402)
T ss_dssp CTT----H-HHHHHHHHHHHHHHTEETTT-TE-ECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHH----CCHHHHHHH
T ss_pred Chh----H-HHHHHHHHHHHHHHhcCCcC-CC-chhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhh----CCHHHHHHH
Confidence 654 5 56666667777766543322 22 2211111 0111 11111111222344444322 247899999
Q ss_pred HHHHHHHHHhhhcCCCCccceeEeecCCCc--cccccCCCCCch------hHHHHHHhHHhh---cCCchHHHHHHHHHH
Q 008300 400 EELAWTCYNFYQSTPTKLAGENYFFRDGQD--MSVGTSWNILRP------ETVESLFYLWRL---TGNKTYKEWGWNIFQ 468 (570)
Q Consensus 400 ~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~--~~~~~~~y~LRP------E~IESlfyLyR~---TgD~~Yre~gW~if~ 468 (570)
+++++.+..-.....+|..+|.|+-+-... .+..++.+..|| -.||..+.|.++ |+|++|.++|-++++
T Consensus 199 ~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~ 278 (402)
T 3gt5_A 199 LVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFD 278 (402)
T ss_dssp HHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Confidence 999988775544456799999986221110 012233344443 578987776554 999999999999999
Q ss_pred HHHHhccc-C-cCccccccCCCCCCCCCcchHHHHHHHHHH
Q 008300 469 AFEKNSRI-E-SGYVGLKDVNTGDKDNMMQSFFLAETLKYL 507 (570)
Q Consensus 469 ai~~~~r~-~-~Gya~i~dV~~~~~~D~meSFflaETLKYL 507 (570)
...++.-- + .|+.--.|......++...-..-+|.++=+
T Consensus 279 ~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~ 319 (402)
T 3gt5_A 279 VAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAA 319 (402)
T ss_dssp HHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHH
T ss_pred HHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHHHHHHHH
Confidence 88776443 2 344322233221112333333446666643
No 13
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.40 E-value=0.0024 Score=67.81 Aligned_cols=275 Identities=15% Similarity=0.037 Sum_probs=156.2
Q ss_pred hhhhhccccceeeccCCChHHHHHHHHHHHHHhhcccCC--CCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHH
Q 008300 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTR--TGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIA 254 (570)
Q Consensus 177 ttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTp--tGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~ 254 (570)
.+-|.+-++.-||. +|++.+++.|+..++.|+..+-.+ .|+- ..++ ..|.+..+ -.+=+-+-+..=+..
T Consensus 52 ~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~-~s~d-~dg~~~~~------k~lyd~Af~i~al~~ 122 (421)
T 2zbl_A 52 ITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWY-ACVN-DQGVVDAS------KQGYQHFFALLGAAS 122 (421)
T ss_dssp HHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBC-SEEE-TTEEEECC------EEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEE-EEeC-CCCCcCCc------hhHHHHHHHHHHHHH
Confidence 77888899999997 899999999999999998776443 3443 3333 22322111 111112222223334
Q ss_pred HHHHhCCchHHHHHHHHHHHHhhcC--CCCCCcceEecCCCCCCCCCeeeecccCch-HHHHHHHHHHhcCCCCCccccc
Q 008300 255 LSQRTGDPKYRQKAEKVIVELNKTF--PADGLLPIYISPDRGTPSYSTITFGAMGDS-FYEYLLKVWIQGNKTSAVKPYS 331 (570)
Q Consensus 255 LS~lTGd~kY~~~a~~i~~~L~~~~--~~~GL~p~~id~~tg~~~~~~~t~Ga~~DS-fYEYLLK~~iL~g~~d~~~~~~ 331 (570)
.+.||++.|.+.|+++.+.+.+.. +..|++-...+.+.. ......++. +-+ .-|-|++.+.++|+.+ |
T Consensus 123 -~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~-~~~~~~~~n--~~m~~~~al~~l~~~tgd~~----~- 193 (421)
T 2zbl_A 123 -AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFS-QTEDYRGGN--ANMHAVEAFLIVYDVTHDKK----W- 193 (421)
T ss_dssp -HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSC-SBCSCEEHH--HHHHHHHHHHHHHHTTCCTH----H-
T ss_pred -HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCC-cccccCCCc--HHHHHHHHHHHHHHhhCCHH----H-
Confidence 588999999999999999998843 336777777776642 222222222 222 3688899999998654 5
Q ss_pred HHHHHHHHHHHHHhhcccCCCCC--eeeeccCCCcccc-cccccccc-----cchhh--------hhhcCCCC-CCCch-
Q 008300 332 RDMWETSMKGLLSLVRRSTPSSF--TYICEKNGDSLID-KMDELACF-----APGMI--------ALGSSGYG-PGDSE- 393 (570)
Q Consensus 332 ~~~y~~A~~~i~~ll~~~~~~~~--~~v~~~~g~~~~~-~m~hLsCF-----~pGml--------aLG~~~~~-~~~~~- 393 (570)
.+.-.+.++.+.+.+.......+ .|-.+.+. .... .-+.-.+| -||-. -++..... .+..+
T Consensus 194 ~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~-~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~ 272 (421)
T 2zbl_A 194 LDRALRIASVIIHDVARNGDYRVNEHFDSQWNP-IRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPA 272 (421)
T ss_dssp HHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCB-CTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCT
T ss_pred HHHHHHHHHHHHHHhccCCCCchhhhcCCcccc-chhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchH
Confidence 55555556655543332111111 12111110 0000 00011123 24432 22221100 00113
Q ss_pred HHHHHHHHHHHHHHHhh-hcC-CCCccceeEeecCCCcccccc---CCCCCchhHHHHHHhHHhhcCCchHHHHHHHHHH
Q 008300 394 KFLSLAEELAWTCYNFY-QST-PTKLAGENYFFRDGQDMSVGT---SWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQ 468 (570)
Q Consensus 394 ~~l~lA~~L~~tC~~~y-~~t-~tGl~PE~~~f~~~~~~~~~~---~~y~LRPE~IESlfyLyR~TgD~~Yre~gW~if~ 468 (570)
++++.|.++++.+.... +.. .-|+. ....... .+.+ .++. --|.|..+..||++|||++|++++-++++
T Consensus 273 ~~l~~A~~l~~~~~~~g~d~~~~GG~~----~~~~~~g-~~~~~~k~~w~-~aea~~all~l~~~tgd~~yl~~a~~~~~ 346 (421)
T 2zbl_A 273 WLLEDAKGLFHATIRDAWAPDGADGFV----YSVDWDG-KPIVRERVRWP-IVEAMGTAYALYTLTDDSQYEEWYQKWWD 346 (421)
T ss_dssp HHHHHHHHHHHHHHHHHBSCSSSSSBC----SCBCTTS-CBSCCCEEHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEE----EeecCCC-CccCCCcccHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 79999999998876533 221 12321 1111111 1111 0111 35899999999999999999999999999
Q ss_pred HHHHhccc
Q 008300 469 AFEKNSRI 476 (570)
Q Consensus 469 ai~~~~r~ 476 (570)
.+.++..-
T Consensus 347 ~~~~~~~d 354 (421)
T 2zbl_A 347 YCIKYLMD 354 (421)
T ss_dssp HHHHHTBC
T ss_pred HHHHhCCC
Confidence 99988875
No 14
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.28 E-value=0.0077 Score=63.02 Aligned_cols=259 Identities=16% Similarity=0.216 Sum_probs=140.5
Q ss_pred hhhhhccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHH
Q 008300 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALS 256 (570)
Q Consensus 177 ttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS 256 (570)
++-=+++||+-+|+++||+.+++.|++.++.++. +.|-.. .+.+. -+. .+ +| .=+..|.
T Consensus 42 ~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~----~~g~l~----~~~~~--------lDd-~~-~g---~~ll~lY 100 (373)
T 1nc5_A 42 HQGVFLCGVLRLWEATGEKRYFEYAKAYADLLID----DNGNLL----FRRDE--------LDA-IQ-AG---LILFPLY 100 (373)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBC----TTCCBC----CCTTC--------GGG-TG-GG---GGHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC----CCCccc----CCCCC--------cch-HH-HH---HHHHHHH
Confidence 3455789999999999999999999999999862 233111 11111 011 11 23 3367788
Q ss_pred HHhCCchHHHHHHHHHHHHhhcC-CCCCCcceEecCCCCCCCCCeeeecccCchHH---HHHHHHHHhcCCCCCcccccH
Q 008300 257 QRTGDPKYRQKAEKVIVELNKTF-PADGLLPIYISPDRGTPSYSTITFGAMGDSFY---EYLLKVWIQGNKTSAVKPYSR 332 (570)
Q Consensus 257 ~lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfY---EYLLK~~iL~g~~d~~~~~~~ 332 (570)
++|||++|.++|.++.+.|.... ...|-+- +.. .. ....- .|.-| ..|.+.+.++|+.+ | .
T Consensus 101 ~~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw---~~~--~~-~~~~w----~D~l~m~~p~L~~l~~~tgd~~----y-~ 165 (373)
T 1nc5_A 101 EQTKDERYVKAAKRLRSLYGTLNRTSEGGFW---HKD--GY-PYQMW----LDGLYMGGPFALKYANLKQETE----L-F 165 (373)
T ss_dssp HHHCCHHHHHHHHHHHGGGGTSCBCTTSCBC---SCT--TS-TTEEE----THHHHHHHHHHHHHHHHHTCTH----H-H
T ss_pred HHhCCHHHHHHHHHHHHHHHhccCCCCCCee---ccC--CC-CCeEE----eCcHHHHHHHHHHHHHHHCCHH----H-H
Confidence 99999999999999999996643 2233221 100 00 01111 33433 56889999999754 3 3
Q ss_pred HHHHHHHHHHHHhhcccCCCCCeeeeccCCCccccc---ccc-cccccc-hh--hhhh----cCCCCC--CCchHHHHHH
Q 008300 333 DMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDK---MDE-LACFAP-GM--IALG----SSGYGP--GDSEKFLSLA 399 (570)
Q Consensus 333 ~~y~~A~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~---m~h-LsCF~p-Gm--laLG----~~~~~~--~~~~~~l~lA 399 (570)
+.=.+.+....+++..+ ..++.|-+ .......++ ... -.+||+ |+ .+.| -+..+. ...+++++.+
T Consensus 166 d~A~~~~~~~~~~l~D~-~tGl~~h~-~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~ 243 (373)
T 1nc5_A 166 DQVVLQESLMRKHTKDA-KTGLFYHA-WDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTL 243 (373)
T ss_dssp HHHHHHHHHHHHHHBCT-TTSCBCSE-EETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-CCCCEEee-cCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHH
Confidence 22233333344444422 23443321 111111110 000 023332 22 1111 112221 1346799999
Q ss_pred HHHHHHHHHhhhcCC-CCccceeEe--ecCCCccccccCCCCCchhHHHHHHhHHhhc-----C--CchHHHHHHHHHHH
Q 008300 400 EELAWTCYNFYQSTP-TKLAGENYF--FRDGQDMSVGTSWNILRPETVESLFYLWRLT-----G--NKTYKEWGWNIFQA 469 (570)
Q Consensus 400 ~~L~~tC~~~y~~t~-tGl~PE~~~--f~~~~~~~~~~~~y~LRPE~IESlfyLyR~T-----g--D~~Yre~gW~if~a 469 (570)
+++++.+.+.- .| +|+ ++ ++.+. ....| +|+==|.++.|-+- | |++|++.|.+++++
T Consensus 244 ~~~a~~l~~~q--~~~dG~----W~~~ld~~~----~~~~~---~EsSatA~~ay~l~~g~~~g~l~~~Y~~~a~k~~~~ 310 (373)
T 1nc5_A 244 QDMIKSICRYQ--DKETGL----WYQIVDKGD----RSDNW---LESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQG 310 (373)
T ss_dssp HHHHHHHHTTS--CTTTSC----CBSBTTCTT----STTCC---BCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhc--CCCCCc----eeeecCCCC----CCCCC---ccccHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHH
Confidence 99999997642 24 663 22 21110 01122 46544555544332 2 78999999999999
Q ss_pred HHHhc--ccCcCccccccC
Q 008300 470 FEKNS--RIESGYVGLKDV 486 (570)
Q Consensus 470 i~~~~--r~~~Gya~i~dV 486 (570)
+.+++ ..+.|.-.+.+|
T Consensus 311 l~~~~~~~~~dG~l~~~~~ 329 (373)
T 1nc5_A 311 LIQHKTETSEDGAFLVKDI 329 (373)
T ss_dssp HHHHHEEECTTSCEEECCE
T ss_pred HHHhceeECCCCCEEecce
Confidence 98875 356686655553
No 15
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.08 E-value=0.0062 Score=64.31 Aligned_cols=244 Identities=11% Similarity=0.063 Sum_probs=127.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCccccccchhhhhccccceeeccCCChHHHHHHHHHHHHHhhcc-cCCCCCCcceeecCCC
Q 008300 150 DYSFSSEFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAW-NTRTGIPYNVINLAHG 228 (570)
Q Consensus 150 ~eEF~~A~~~V~~~ldF~~~~~VsvFEttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAF-dTptGiP~~~vNl~~g 228 (570)
++-++.|.+|+...++ .++.+.-.+ ++.....|+-+|.+++|+.+++.|.++||.|+.-+ +++.|--+... .+
T Consensus 87 ~~y~~~a~~~~~~~~~--~~~~~~n~D-~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~---~~ 160 (382)
T 3pmm_A 87 IEMRDIIDRWFADRFA--EGATTKNVN-TMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMT---LA 160 (382)
T ss_dssp HHHHHHHHHHHHHHHH--HCCCCCCTT-TTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCC---SS
T ss_pred HHHHHHHHHHHHHHHc--CCCCcCccc-chHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeec---CC
Confidence 4455666777764332 122111011 12344578999999999999999999999998644 56665433210 00
Q ss_pred CCCCCCCCCCCccccccccchhhH-HHHHHHhCCchHHHHHHHHHHHHhh-cC-CCCCCcceEecCCCCCCCCCeeeecc
Q 008300 229 NPHNPSWTGGESILADSGTEQLEL-IALSQRTGDPKYRQKAEKVIVELNK-TF-PADGLLPIYISPDRGTPSYSTITFGA 305 (570)
Q Consensus 229 ~~~~~~~~~~~s~lAe~GSl~LEF-~~LS~lTGd~kY~~~a~~i~~~L~~-~~-~~~GL~p~~id~~tg~~~~~~~t~Ga 305 (570)
+........+.--|.++| ..++++|||++|.+.|.+-+....+ .+ +..||+-.-.+...+... ....|+
T Consensus 161 ------~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~~~~~-~~~~Wa- 232 (382)
T 3pmm_A 161 ------EENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNF-ARARWA- 232 (382)
T ss_dssp ------CCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTTTBCT-TCCCBH-
T ss_pred ------CCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCCCCeeeeccCCCCCCC-Ccceec-
Confidence 001112233333355665 6799999999999988887777776 33 567887776665432211 111121
Q ss_pred cCchHHHH-HHHHHHh--cCCCC-CcccccHHHHHHHHHHHHHhhcccCCCCCeeeeccCCCcccccccccccccchhhh
Q 008300 306 MGDSFYEY-LLKVWIQ--GNKTS-AVKPYSRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIA 381 (570)
Q Consensus 306 ~~DSfYEY-LLK~~iL--~g~~d-~~~~~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmla 381 (570)
+|..-+=| |...+-. ..... .-+.+ .+.+.+.++++.++.. ++++-+.. .+...-....+.-++|+-|++-
T Consensus 233 RG~gW~~~gl~~~l~~l~~p~~~~~~~~~-~~~~~~~a~~~~~~q~---~~G~W~~~-~d~~~~y~EsSatA~~ay~ll~ 307 (382)
T 3pmm_A 233 RGNSWLTMVIPDFLELVDLPEGNAVRRYL-ITVLDAQIAALAECQD---DSGLWHTL-LDDPHSYLEASATAGFAYGILK 307 (382)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCHHHHHH-HHHHHHHHHHHHHHCC---TTSCEESB-TTCTTSCEEHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhhcCCcchhhHHHH-HHHHHHHHHHHHHcCC---CCCChhhc-cCCCCCCccccHHHHHHHHHHH
Confidence 12222111 1112211 11111 00234 5666666677666542 33443311 1111111233333445555544
Q ss_pred hhcCC-CCCCCchHHHHHHHHHHHHHHHhhhcCCCCcc
Q 008300 382 LGSSG-YGPGDSEKFLSLAEELAWTCYNFYQSTPTKLA 418 (570)
Q Consensus 382 LG~~~-~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~ 418 (570)
|.+. +- .++|...|++..+++..- ..+.|..
T Consensus 308 -~~~~g~l---~~~Y~~~a~ka~~~l~~~--i~~dG~l 339 (382)
T 3pmm_A 308 -AVRKRYV---GQHYAGVAEKAIRGIVQN--ISPQGEL 339 (382)
T ss_dssp -HHHTTSS---CGGGHHHHHHHHHHHHHT--BCTTSCB
T ss_pred -HHHcCCC---cHHHHHHHHHHHHHHHhh--CCCCCCE
Confidence 3332 22 257999998888877653 3455643
No 16
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.05 E-value=0.00041 Score=72.44 Aligned_cols=145 Identities=18% Similarity=0.162 Sum_probs=92.0
Q ss_pred ccceeeccCCChHHHHHHHHHHHHH-hhcccCC--CCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhC
Q 008300 184 GLLSAYDLSGDKVFLEKARDIADRL-LPAWNTR--TGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTG 260 (570)
Q Consensus 184 GLLSAY~LSgd~~lL~KA~dLadrL-LpAFdTp--tGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTG 260 (570)
+++.||++++|+..|++|+++++.+ ...||++ .||++.. . .+.+..++ .-|-+..=+.+|+++||
T Consensus 100 a~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~---~-------~~~~knai--sN~~~~~~la~l~~~tg 167 (349)
T 3k7x_A 100 AAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRR---P-------QMYYKNTP--VNAPFIILSCWLYNELN 167 (349)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEET---T-------EEEEEEHH--HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCCCceEecC---C-------Cccccchh--hHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999 7999975 3564421 1 01111121 22333444678999999
Q ss_pred CchHHHHHHHHHHHHhh-cCCCCCCcceEecCC-CCCCCC-CeeeecccCchHHHHHHHHHHhcCCCCCcccccHHHHHH
Q 008300 261 DPKYRQKAEKVIVELNK-TFPADGLLPIYISPD-RGTPSY-STITFGAMGDSFYEYLLKVWIQGNKTSAVKPYSRDMWET 337 (570)
Q Consensus 261 d~kY~~~a~~i~~~L~~-~~~~~GL~p~~id~~-tg~~~~-~~~t~Ga~~DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~ 337 (570)
|++|.+.|+++++.+.+ .....|++-.-++.. .|.... ...+.+.+. +..=+.-.|-.+|+ +.| .+.-.+
T Consensus 168 d~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~--~l~g~~~LY~~T~d----~~y-l~~a~~ 240 (349)
T 3k7x_A 168 ETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGV--YIGANLELYRITKE----AIY-LDTANK 240 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHH--HHHHHHHHHHHHCC----HHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHH--HHHHHHHHHHhhCc----HHH-HHHHHH
Confidence 99999999999999987 233447776655532 233211 122222111 33444556666775 346 666677
Q ss_pred HHHHHHHhhc
Q 008300 338 SMKGLLSLVR 347 (570)
Q Consensus 338 A~~~i~~ll~ 347 (570)
.++.+.+++.
T Consensus 241 l~~~~~~~f~ 250 (349)
T 3k7x_A 241 TAAISLKELT 250 (349)
T ss_dssp HHHHHHHHHE
T ss_pred HHHHHHHHhc
Confidence 7777666543
No 17
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.04 E-value=0.0025 Score=66.75 Aligned_cols=100 Identities=10% Similarity=0.021 Sum_probs=71.0
Q ss_pred ccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhh-HHHHHHHhC
Q 008300 182 VGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLE-LIALSQRTG 260 (570)
Q Consensus 182 LGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LE-F~~LS~lTG 260 (570)
.=+|+.+|++++|+.+++.|+++++.|.-.|+++.|--+.. . .++ .....+.--+.++ +.+++++||
T Consensus 93 g~~ll~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~-------~---~~~--~~~w~D~l~m~~p~L~~l~~~tg 160 (373)
T 1nc5_A 93 GLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHK-------D---GYP--YQMWLDGLYMGGPFALKYANLKQ 160 (373)
T ss_dssp GGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSC-------T---TST--TEEETHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCeecc-------C---CCC--CeEEeCcHHHHHHHHHHHHHHHC
Confidence 34678899999999999999999999998888877643311 1 111 1112221113333 568999999
Q ss_pred CchHHHHHHHHHHHHhhc--CCCCCCcceEecCCC
Q 008300 261 DPKYRQKAEKVIVELNKT--FPADGLLPIYISPDR 293 (570)
Q Consensus 261 d~kY~~~a~~i~~~L~~~--~~~~GL~p~~id~~t 293 (570)
|++|.+.|.+.++...+. .+..||+-.-.+...
T Consensus 161 d~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~~ 195 (373)
T 1nc5_A 161 ETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAK 195 (373)
T ss_dssp CTHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTC
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEeecCCcc
Confidence 999999999988888773 356888877676654
No 18
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.00 E-value=0.008 Score=63.54 Aligned_cols=217 Identities=18% Similarity=0.145 Sum_probs=123.0
Q ss_pred hhccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHh
Q 008300 180 RVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRT 259 (570)
Q Consensus 180 RvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lT 259 (570)
=+.-++..+|.|+||+.+++-|.+-|+.|+.-|+...|.-..+ +.. + ++.|. +..++--+- +..=+...++.|
T Consensus 92 ~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw-~~~-~---~~~~~-~~~iID~mm-ni~~L~~A~~~~ 164 (377)
T 2ahf_A 92 LYSLSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQAW-GPK-G---DPENG-GRIIIDCLL-NLPLLLWAGEQT 164 (377)
T ss_dssp HHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCB-SST-T---CTTTT-TEEEGGGGG-GHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCCCCeEEec-cCC-C---CCCCC-ceEEechHH-HHHHHHHHHHHh
Confidence 3345677799999999999999999999999998332433222 111 1 11121 122221111 122355567999
Q ss_pred CCchHHHHHHHHHHHHhhc-CCCC-CCcc-eEecCCCCCCCCCeeeecccCchH---------HHHHHHHHHhcCCCCCc
Q 008300 260 GDPKYRQKAEKVIVELNKT-FPAD-GLLP-IYISPDRGTPSYSTITFGAMGDSF---------YEYLLKVWIQGNKTSAV 327 (570)
Q Consensus 260 Gd~kY~~~a~~i~~~L~~~-~~~~-GL~p-~~id~~tg~~~~~~~t~Ga~~DSf---------YEYLLK~~iL~g~~d~~ 327 (570)
|||+|.+.|.+..+.+.+. ...+ .++- ...|+.+|++..+ .++-+..|.+ -.-|+-.|-.+++.
T Consensus 165 gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~-~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~--- 240 (377)
T 2ahf_A 165 GDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRG-GTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNA--- 240 (377)
T ss_dssp CCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEE-ECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCH---
T ss_pred CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeC-CCcCCcCCcchhHHHHHHHHHHHHHHHHHHCCh---
Confidence 9999999999988888873 3333 3333 3368999987432 1232333332 12334455556643
Q ss_pred ccccHHHHHHHHHHHHHhhcccCCCCCeeeec-cCCCcccc-cccccccccchhhhhhcCCC-CCCCchHHHHHHHHHHH
Q 008300 328 KPYSRDMWETSMKGLLSLVRRSTPSSFTYICE-KNGDSLID-KMDELACFAPGMIALGSSGY-GPGDSEKFLSLAEELAW 404 (570)
Q Consensus 328 ~~~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~-~~g~~~~~-~m~hLsCF~pGmlaLG~~~~-~~~~~~~~l~lA~~L~~ 404 (570)
.| .+.-.+..+.+.+++. ..+..|-.- .......+ .-+.-++++-|++-|+.... .....+++.+.|+++.+
T Consensus 241 -~y-L~~A~~la~~~l~~~~---~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~ 315 (377)
T 2ahf_A 241 -DL-LETAKRMARHFLARVP---EDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVT 315 (377)
T ss_dssp -HH-HHHHHHHHHHHHTTCC---TTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred -HH-HHHHHHHHHHHHHhhH---HhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHH
Confidence 34 4555555555555431 112112111 11111111 23455677888888876532 11124679999999999
Q ss_pred HHHHhhhc
Q 008300 405 TCYNFYQS 412 (570)
Q Consensus 405 tC~~~y~~ 412 (570)
+...-|..
T Consensus 316 ~l~~~y~~ 323 (377)
T 2ahf_A 316 ALRDGYAE 323 (377)
T ss_dssp HHHHHTBC
T ss_pred HHHHHHhc
Confidence 98887754
No 19
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=96.88 E-value=0.011 Score=63.05 Aligned_cols=225 Identities=16% Similarity=0.108 Sum_probs=126.3
Q ss_pred hhccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHh
Q 008300 180 RVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRT 259 (570)
Q Consensus 180 RvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lT 259 (570)
-+.=++..+|.|+||+..++-|.+-|+.|+.-|++..|.-..+-.+. ..+.+ .. +-+.--...=+..-+++|
T Consensus 118 ~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~------~~~~~-~~-iID~~mni~~L~~A~~~~ 189 (397)
T 2zzr_A 118 LYTPSCTAEYRINGDVKALEATIKAADKLMERYQEKGGFIQAWGELG------YKEHY-RL-IIDCLLNIQLLFFAYEQT 189 (397)
T ss_dssp HHTTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTT------CGGGC-EE-ETTHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCcCCCEEEecccCC------CCCCC-ce-eechHhHHHHHHHHHHHh
Confidence 34445677999999999999999999999999987656443331111 11111 11 111111112244457999
Q ss_pred CCchHHHHHHHHHHHHhh-cCCCC-CCcce-EecCCCCCCCCCeeeecccCchH-----H----HHHHHHHHhcCCCCCc
Q 008300 260 GDPKYRQKAEKVIVELNK-TFPAD-GLLPI-YISPDRGTPSYSTITFGAMGDSF-----Y----EYLLKVWIQGNKTSAV 327 (570)
Q Consensus 260 Gd~kY~~~a~~i~~~L~~-~~~~~-GL~p~-~id~~tg~~~~~~~t~Ga~~DSf-----Y----EYLLK~~iL~g~~d~~ 327 (570)
|||+|.+.|.+..+.+.+ ....+ +++-. ..|+.+|++..+ .++-+..|.+ + .-|+-.|--+++.+
T Consensus 190 gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~-- 266 (397)
T 2zzr_A 190 GDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQ-- 266 (397)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-ECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHH--
T ss_pred CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-CcccccCcchhhHHHHHHHHHHHHHHHHHHCCHH--
Confidence 999999999988888777 33333 33333 347788886422 2333333332 2 22344566666543
Q ss_pred ccccHHHHHHHHHHHHHhhcccCCCCCeeeec-cCCCccc-ccccccccccchhhhhhcCCCCCCCchH--HHHHHHHHH
Q 008300 328 KPYSRDMWETSMKGLLSLVRRSTPSSFTYICE-KNGDSLI-DKMDELACFAPGMIALGSSGYGPGDSEK--FLSLAEELA 403 (570)
Q Consensus 328 ~~~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~-~~g~~~~-~~m~hLsCF~pGmlaLG~~~~~~~~~~~--~l~lA~~L~ 403 (570)
| .+.-.+..+-+.+++. ..+..|-.- ....... ..-+.-++++-|++-|+..... ...++ +.+.|+++.
T Consensus 267 --y-L~~A~~la~~~l~~~~---~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~-~~~~~~~Y~~~A~~~l 339 (397)
T 2zzr_A 267 --Q-IILFKGMTNYFLNRLP---EDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPE-VDPDKETYKYAMHTML 339 (397)
T ss_dssp --H-HHHHHHHHHHHHHTCC---TTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCT-TCTTHHHHHHHHHHHH
T ss_pred --H-HHHHHHHHHHHHHhhH---HhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCc-cchhhHHHHHHHHHHH
Confidence 4 4444444444555431 111112111 1111111 1244556778888888875322 22356 999999999
Q ss_pred HHHHHhhhc----CCCCccceeE
Q 008300 404 WTCYNFYQS----TPTKLAGENY 422 (570)
Q Consensus 404 ~tC~~~y~~----t~tGl~PE~~ 422 (570)
++....|.. ...|+.....
T Consensus 340 ~~l~~~y~~~~~~~~~glL~h~~ 362 (397)
T 2zzr_A 340 RSLIEQYSNNELIAGRPLLLHGV 362 (397)
T ss_dssp HHHHHHTBCCCCCTTCCSBCCEE
T ss_pred HHHHHHHhccCCCCCCceeeece
Confidence 999888753 2245554443
No 20
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=96.83 E-value=0.0091 Score=65.83 Aligned_cols=218 Identities=17% Similarity=0.151 Sum_probs=133.9
Q ss_pred CchHHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCCCcccccHHHHHHHHH
Q 008300 261 DPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTSAVKPYSRDMWETSMK 340 (570)
Q Consensus 261 d~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~A~~ 340 (570)
+....+++++++.+-|+.....+.--+.+.|-+|...+ .+|. +-+.-+-|-=.||+.- .+-|++|++
T Consensus 85 ~~~rr~~Vk~~F~haW~~Y~~~Awg~DEL~PlS~~g~d---~fg~-g~TLVDSLDTL~IMgl---------~~EF~~A~~ 151 (538)
T 1x9d_A 85 LNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSE---WFGL-GLTLIDALDTMWILGL---------RKEFEEARK 151 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCTTSSEEETTTTEEEC---SSSS-CHHHHHHHHHHHHTTC---------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCccc---ccCC-ceeeeeccceeeecCC---------HHHHHHHHH
Confidence 45678899999999998443333334566777776544 3555 6666777888888863 577899999
Q ss_pred HHHHhhcccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccce
Q 008300 341 GLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGE 420 (570)
Q Consensus 341 ~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE 420 (570)
-|.+.+..... . ..+.++.---++||+|. |+... ..+.+|+.|.+|++--.-.++ ||||+.--
T Consensus 152 ~V~~~~~f~~d-~-----------~VsvFETtIR~LGGLLS--Ay~Ls--gd~~lL~kA~dLadrLlpAFd-TptgiP~~ 214 (538)
T 1x9d_A 152 WVSKKLHFEKD-V-----------DVNLFESTIRILGGLLS--AYHLS--GDSLFLRKAEDFGNRLMPAFR-TPSKIPYS 214 (538)
T ss_dssp HHHHHCCCCSS-C-----------EEEHHHHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHGGGGC-STTSCCCS
T ss_pred HHHHhcCCCCC-c-----------eeehhheehhhhhhhhh--HHHhc--CCHHHHHHHHHHHHHHHHhhc-CCCCCCcc
Confidence 88763322111 0 11122222345788876 21111 135799999999998888885 79999877
Q ss_pred eEeecCCCccccccCCCCCchhHHHH------HHhHHhhcCCchHHHHHHHHHHHHHHhcccCcC-ccccccCCCCCC--
Q 008300 421 NYFFRDGQDMSVGTSWNILRPETVES------LFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG-YVGLKDVNTGDK-- 491 (570)
Q Consensus 421 ~~~f~~~~~~~~~~~~y~LRPE~IES------lfyLyR~TgD~~Yre~gW~if~ai~~~~r~~~G-ya~i~dV~~~~~-- 491 (570)
.+++..+...... ..-..-+.|. .-+|-|+|||++|.+.+-.+++.+.+.--...| +...-|+.++..
T Consensus 215 ~vnl~~g~~~~~~---~~~~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~GL~p~~i~~~tG~~~~ 291 (538)
T 1x9d_A 215 DVNIGTGVAHPPR---WTSDSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTH 291 (538)
T ss_dssp EEETTTCCEECCT---TCSEEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEES
T ss_pred eeeecccccCCCC---cCCCceeccccceeeeHHHHHHHhCCcHHHHHHHHHHHHHHhcccCCCCCcceEEeCCCCCccC
Confidence 8888776421110 0001123332 346899999999999999999999875412334 333335544432
Q ss_pred ------CCCcchHHHHHHHHHHHHhcCC
Q 008300 492 ------DNMMQSFFLAETLKYLYLLFSP 513 (570)
Q Consensus 492 ------~D~meSFflaETLKYLYLLFsd 513 (570)
.-...||+ |-|==.|+++..
T Consensus 292 ~~~~~lGa~~DS~Y--EYLlK~~il~g~ 317 (538)
T 1x9d_A 292 LGVFTLGARADSYY--EYLLKQWIQGGK 317 (538)
T ss_dssp TTEECSSTTTHHHH--HHHHHHHHHTTS
T ss_pred CcceeecCCccHHH--HHHHHHHHHcCC
Confidence 23446664 433334566653
No 21
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.73 E-value=0.0092 Score=62.23 Aligned_cols=245 Identities=16% Similarity=0.080 Sum_probs=149.7
Q ss_pred hccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhC
Q 008300 181 VVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTG 260 (570)
Q Consensus 181 vLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTG 260 (570)
.+|+|+-+|..+||+.+++.|.+..+.+... ....+| +. ..-+.|-+.+-+..+.++||
T Consensus 51 ~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~--~~~~~~-------------~~------~~DD~a~~~la~~~aye~t~ 109 (349)
T 3k7x_A 51 LVEVRLDAYLRTKKQADLEVAEKTYLHNKNR--NGGTLI-------------HD------FYDDMLWNALAAYRLYKATG 109 (349)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH--TTSSSC-------------CS------BHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc--CCCCCC-------------cc------CccHHHHHHHHHHHHHHHHC
Confidence 4699999999999999999999999988752 111111 11 13456667789999999999
Q ss_pred CchHHHHHHHHHHHH-hhcCCC--CCCcceEecCCCCCCCCCeeeecccCch-HHHHHHHHHHhcCCCCCcccccHHHHH
Q 008300 261 DPKYRQKAEKVIVEL-NKTFPA--DGLLPIYISPDRGTPSYSTITFGAMGDS-FYEYLLKVWIQGNKTSAVKPYSRDMWE 336 (570)
Q Consensus 261 d~kY~~~a~~i~~~L-~~~~~~--~GL~p~~id~~tg~~~~~~~t~Ga~~DS-fYEYLLK~~iL~g~~d~~~~~~~~~y~ 336 (570)
|++|.+.|+++++.+ ...... .|-+. .++.. .-.-.+-+.+ +-.-+.+.+..+|+.. | .+.=+
T Consensus 110 ~~~yL~~A~~l~~~l~~~~wd~~~gGGi~--W~~~~------~~~knaisN~~~~~~la~l~~~tgd~~----Y-l~~A~ 176 (349)
T 3k7x_A 110 KSIYLEDAQLVWQDLVDTGWNDIMGGGFA--WRRPQ------MYYKNTPVNAPFIILSCWLYNELNETK----Y-LEWAM 176 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHTBCSGGGSCBE--EETTE------EEEEEHHHHHHHHHHHHHHHHHHCCHH----H-HHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCCCCCCceE--ecCCC------ccccchhhHHHHHHHHHHHHHHhCCHH----H-HHHHH
Confidence 999999999999999 554322 23332 22211 0011111222 4577789999998754 5 55555
Q ss_pred HHHHHHHHhhcccCCCCCeeeecc--CCCccccccc---ccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhh
Q 008300 337 TSMKGLLSLVRRSTPSSFTYICEK--NGDSLIDKMD---ELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQ 411 (570)
Q Consensus 337 ~A~~~i~~ll~~~~~~~~~~v~~~--~g~~~~~~m~---hLsCF~pGmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~ 411 (570)
+..+-+.+.+.... +..|=+.. ..+....... --..++.|...|--.. ..+++++.|.+|++.+.+.+.
T Consensus 177 ~~~~w~~~~l~d~~--g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T----~d~~yl~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 177 KTYEWQTKVLVRED--GFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRIT----KEAIYLDTANKTAAISLKELT 250 (349)
T ss_dssp HHHHHHHHHHBCTT--SCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHhcCCCCC--CeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhh----CcHHHHHHHHHHHHHHHHHhc
Confidence 56666666555432 33232111 0111111000 1123455554443222 247899999999999877654
Q ss_pred cCCCCccceeEeecCCCccccccCCCCCchhHHHHHHhHHhhcCCchHHHHHHHHHHHHHHhccc
Q 008300 412 STPTKLAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI 476 (570)
Q Consensus 412 ~t~tGl~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~ 476 (570)
+.|+.+|.- .+.+. ..-+.+ ++--+-.+.++++++.|+.+--.--+++-++|+.
T Consensus 251 --~~gi~~~~~---~~~D~-~sFkgi-----~~r~L~~l~~~~p~~~~~~~l~~sa~aa~~~~~~ 304 (349)
T 3k7x_A 251 --EDGIFKDEG---NGGDE-GLFKGI-----FYRYFTDLIEETANKTYRDFVLNSCQILVENAKL 304 (349)
T ss_dssp --ETTEECCCC---SSSGG-GGHHHH-----HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCEE
T ss_pred --cCCcccCCC---CCccH-HHHHHH-----HHHHHHHHHHHCChHHHHHHHHHHHHHHHHhCCC
Confidence 468776521 01110 010111 4455667889999999999999999999999964
No 22
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=96.65 E-value=0.01 Score=65.11 Aligned_cols=231 Identities=19% Similarity=0.158 Sum_probs=133.7
Q ss_pred CchHHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeee-c-ccCchHHHHHHHHHHhcC---CCCCcccccHHHH
Q 008300 261 DPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITF-G-AMGDSFYEYLLKVWIQGN---KTSAVKPYSRDMW 335 (570)
Q Consensus 261 d~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~-G-a~~DSfYEYLLK~~iL~g---~~d~~~~~~~~~y 335 (570)
.....+++++++.+-|+.....+.--+.+.|-+|...+.. + | +.|-..-+-|-=.||+.+ ... ... .+-|
T Consensus 2 ~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~~--~~g~g~G~TlVDSLDTL~IM~~~~~~~~--~gl-~~Ef 76 (511)
T 1dl2_A 2 AGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMP--RGNQPLGWIIVDSVDTLMLMYNSSTLYK--SEF-EAEI 76 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECSS--TTCCCCCTTHHHHHHHHHHHHHHCSSSH--HHH-HHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCCC--ccCCccceeeeecccceEEecccccccc--CCc-HHHH
Confidence 3456788999999999843333333345666676654321 3 3 334455556777888821 111 123 6788
Q ss_pred HHHHHHHHHhhcccCCCCCeeeeccCCCcccccccccccccchhhh---hhcCCCCCCCchHHHHHHHHHHHHHHHhhhc
Q 008300 336 ETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIA---LGSSGYGPGDSEKFLSLAEELAWTCYNFYQS 412 (570)
Q Consensus 336 ~~A~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmla---LG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~ 412 (570)
++|++-|.+.+-.... . ..+.++.--=++||+|. |.... .......+|+.|.+|++--.-.++.
T Consensus 77 ~~A~~~V~~~l~F~~d-~-----------~VsvFETtIR~LGGLLSAy~Ls~~~-~~~~d~~lL~kA~dLadrLlpAFd~ 143 (511)
T 1dl2_A 77 QRSEHWINDVLDFDID-A-----------EVNVFETTIRMLGGLLSAYHLSDVL-EVGNKTVYLNKAIDLGDRLALAFLS 143 (511)
T ss_dssp HHHHHHHHHTCCCCCS-S-----------EEEHHHHHHHHHHHHHHHHHHHHHH-TCSCHHHHHHHHHHHHHHHHGGGGS
T ss_pred HHHHHHHHHhcCCCCC-c-----------eechhheehhhhhhhhhHHHhcccc-cCCCcHHHHHHHHHHHHHHHHhhcC
Confidence 9999988874322211 0 11112222234677765 22100 0112468999999999999999976
Q ss_pred CCCCccceeEeecCCCccccccCCCCCchhHHHH------HHhHHhhcCCchHHHHHHHHHHHHHHhcc---cCcC-ccc
Q 008300 413 TPTKLAGENYFFRDGQDMSVGTSWNILRPETVES------LFYLWRLTGNKTYKEWGWNIFQAFEKNSR---IESG-YVG 482 (570)
Q Consensus 413 t~tGl~PE~~~f~~~~~~~~~~~~y~LRPE~IES------lfyLyR~TgD~~Yre~gW~if~ai~~~~r---~~~G-ya~ 482 (570)
||||+.--.+++..+..... .+-.-..-+.|. .-+|-|+||||+|.+.+-++++.+.+.-. ...| +..
T Consensus 144 TptgiP~~~vnl~~g~~~~~--~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~ 221 (511)
T 1dl2_A 144 TQTGIPYSSINLHSGQAVKN--HADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPI 221 (511)
T ss_dssp SSSSCCCSEEETTTCCEECC--SSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBS
T ss_pred CCCCCCCceeecccCCCCCC--CCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcce
Confidence 89999888888887642111 000000112332 34689999999999999999999988630 2234 333
Q ss_pred cccCCCCCC-------CCCcchHHHHHHHHHHHHhcCC
Q 008300 483 LKDVNTGDK-------DNMMQSFFLAETLKYLYLLFSP 513 (570)
Q Consensus 483 i~dV~~~~~-------~D~meSFflaETLKYLYLLFsd 513 (570)
.-|+.++.. .-...||+ |-|==-|+++.|
T Consensus 222 ~i~~~tg~~~~~~~~lGa~~DS~Y--EYLlK~~il~~d 257 (511)
T 1dl2_A 222 YTFPDTGKFGASTIRFGSRGDSFY--EYLLKQYLLTHE 257 (511)
T ss_dssp EECTTTCCBCSCCBCSSTTTHHHH--HHHHHHHHHHCC
T ss_pred EEcCCCCCccCCeeeecCCCCcHH--HHHHHHHHhcCC
Confidence 345554431 34556764 444333555544
No 23
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=96.39 E-value=0.013 Score=63.66 Aligned_cols=180 Identities=14% Similarity=0.101 Sum_probs=109.1
Q ss_pred HHHhcC-CCCCChhHHHHHHHHHHhhcCCCC--Cc------------cccccchhhhhccccceee-ccCCChHHHHHHH
Q 008300 139 LYSMCL-FWRISDYSFSSEFMWIANSLDFNK--SY------------DASVFETTIRVVGGLLSAY-DLSGDKVFLEKAR 202 (570)
Q Consensus 139 L~IMgl-~~~~~~eEF~~A~~~V~~~ldF~~--~~------------~VsvFEttIRvLGGLLSAY-~LSgd~~lL~KA~ 202 (570)
.|||.- ......+-|++|++-|.+++-+.. .. ....++.-.-++||+++-- ++-+.+..++.|+
T Consensus 241 ~~il~g~~~~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~~~~a~ 320 (475)
T 2ri9_A 241 MYVYDPKRFETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGTVLDRQDFIDFGL 320 (475)
T ss_dssp HHHHCTTTTHHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhcccccccHHHHHHHH
Confidence 677733 001124568899999988776542 11 1223555566778876411 2334667888888
Q ss_pred HHHHHHhhccc-CCCCCCcceeecCCCCCCCC--CCCC-CCccccccccch--hh----HHHHHHHhCCchHHHHHHHHH
Q 008300 203 DIADRLLPAWN-TRTGIPYNVINLAHGNPHNP--SWTG-GESILADSGTEQ--LE----LIALSQRTGDPKYRQKAEKVI 272 (570)
Q Consensus 203 dLadrLLpAFd-TptGiP~~~vNl~~g~~~~~--~~~~-~~s~lAe~GSl~--LE----F~~LS~lTGd~kY~~~a~~i~ 272 (570)
+|++--.-+++ ||+|+.--.+++..+..... .|.. ....... +... -| .-+|-|+||||+|.+.+-+++
T Consensus 321 ~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~-~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f 399 (475)
T 2ri9_A 321 ELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISS-GSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAF 399 (475)
T ss_dssp HHHHHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEE-CCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecc-cccCCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 88888777775 69998777777765432110 0000 0000111 1111 23 356999999999999999999
Q ss_pred HHHhhcCCCCCCcceEecCCC---CCCCCCeeeecccCchHH--HHHHHHHHhcCCCCC
Q 008300 273 VELNKTFPADGLLPIYISPDR---GTPSYSTITFGAMGDSFY--EYLLKVWIQGNKTSA 326 (570)
Q Consensus 273 ~~L~~~~~~~GL~p~~id~~t---g~~~~~~~t~Ga~~DSfY--EYLLK~~iL~g~~d~ 326 (570)
+.|.+....++=+...-|+.+ ++. .-.-.||+ |-|-=.|+|+.+.+.
T Consensus 400 ~ai~k~~rt~~G~a~i~dV~~~~~~~~-------~D~meSF~laETLKYlYLLFsd~~~ 451 (475)
T 2ri9_A 400 VAINSTCRTDSGFAAVSDVNKANGGSK-------YDNQESFLFAEVMKYSYLAHSEDAA 451 (475)
T ss_dssp HHHHHHTBCSSSBCCBSCTTSGGGSSB-------BSCCCTHHHHTHHHHHHHTTSCCCT
T ss_pred HHHHHHHccccCCcccccccCCCCCCc-------CCccchHHHHHHHHHHHhcccCCcc
Confidence 999995444444555556665 332 23457887 776666889987663
No 24
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=96.16 E-value=0.06 Score=58.57 Aligned_cols=219 Identities=16% Similarity=0.167 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeeccc-CchHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHH
Q 008300 264 YRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAM-GDSFYEYLLKVWIQGNKTSAVKPYSRDMWETSMKGL 342 (570)
Q Consensus 264 Y~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~-~DSfYEYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i 342 (570)
..+++++++.+-|+.....+.--+.+.|-+|..... -.||+. +-+.-+-|-=.||+.- .+-|++|++-|
T Consensus 20 rr~~Vk~~F~haw~~Y~~~Awg~DEl~P~S~~g~~~-~~fg~~~g~TlVDsLDTL~IMgl---------~~Ef~~A~~~v 89 (478)
T 1nxc_A 20 KRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSS-SLFGNIKGATIVDALDTLFIMGM---------KTEFQEAKSWI 89 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSEEETTTTEEECC-GGGTTCCCHHHHHHHHHHHHTTC---------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccCCCcCC-CccCCcccchheecccceeecCC---------HHHHHHHHHHH
Confidence 457888899999884322222234556666654321 135665 6666777888888853 57789999998
Q ss_pred HHhhcccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccceeE
Q 008300 343 LSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENY 422 (570)
Q Consensus 343 ~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~ 422 (570)
.+.+..... . ..+.++.---++||+|.-- ... ..+.+++.|.+|++--.-.++ ||||+.--.+
T Consensus 90 ~~~l~f~~~-~-----------~vsvFETtIR~LGGLLSAy--~Ls--gd~~lL~kA~dLad~LlpAFd-TptgiP~~~v 152 (478)
T 1nxc_A 90 KKYLDFNVN-A-----------EVSVFEVNIRFVGGLLSAY--YLS--GEEIFRKKAVELGVKLLPAFH-TPSGIPWALL 152 (478)
T ss_dssp HHHCCCCCS-S-----------EEEHHHHHHHHHHHHHHHH--HHH--CCHHHHHHHHHHHHHHGGGGC-SSSSCCCSEE
T ss_pred HhhcCccCC-C-----------ccchhheehhhhhhhhhhh--hcc--CCHHHHHHHHHHHHHHHHhhc-CCCCCCccee
Confidence 874332211 0 1112222233578887621 111 135789999999998888885 7999988888
Q ss_pred eecCCCccccccCCCCCchhHHHH------HHhHHhhcCCchHHHHHHHHHHHHHHhcccCcC-ccccccCCCCCC----
Q 008300 423 FFRDGQDMSVGTSWNILRPETVES------LFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG-YVGLKDVNTGDK---- 491 (570)
Q Consensus 423 ~f~~~~~~~~~~~~y~LRPE~IES------lfyLyR~TgD~~Yre~gW~if~ai~~~~r~~~G-ya~i~dV~~~~~---- 491 (570)
++..+......... .-..-+.|. .=+|-|+||||+|.+.+..+.+.+.+.-+. .| +...-|+.++..
T Consensus 153 nl~~g~~~~~~~~~-~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~-~GL~p~~i~~~tg~~~~~~ 230 (478)
T 1nxc_A 153 NMKSGIGRNWPWAS-GGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKP-EGLYPNYLNPSSGQWGQHH 230 (478)
T ss_dssp ETTTCCEECCTTSG-GGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCCG-GGCCCSEECTTTCCBCSCE
T ss_pred ecccccCCCCcccC-CCCcccccccchhhhHHHHHHHHCChHHHHHHHHHHHHHHhcCCC-CCccccccCCCCCCccCce
Confidence 88776321100000 000113332 247899999999999999999999886543 34 333345554432
Q ss_pred ---CCCcchHHHHHHHHHHHHhcCC
Q 008300 492 ---DNMMQSFFLAETLKYLYLLFSP 513 (570)
Q Consensus 492 ---~D~meSFflaETLKYLYLLFsd 513 (570)
.-...||+ |-|==.|+++..
T Consensus 231 ~~~Ga~~DS~Y--EYLlK~~il~g~ 253 (478)
T 1nxc_A 231 VSVGGLGDSFY--EYLLKAWLMSDK 253 (478)
T ss_dssp ECSSTTTHHHH--HHHHHHHHHTTT
T ss_pred eeecCCCchHH--HHHHHHHHHcCC
Confidence 34456664 443223666654
No 25
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=95.85 E-value=0.012 Score=64.47 Aligned_cols=183 Identities=12% Similarity=0.019 Sum_probs=107.6
Q ss_pred HHHhcC-CCCCChhHHHHHHHHHHhhcCCCC--Cc------------cccccchhhhhcccccee-eccCCChHHHHHHH
Q 008300 139 LYSMCL-FWRISDYSFSSEFMWIANSLDFNK--SY------------DASVFETTIRVVGGLLSA-YDLSGDKVFLEKAR 202 (570)
Q Consensus 139 L~IMgl-~~~~~~eEF~~A~~~V~~~ldF~~--~~------------~VsvFEttIRvLGGLLSA-Y~LSgd~~lL~KA~ 202 (570)
.|||.- ......+-|++|++-|.+++-+.. .. ....++.-.-++||+++- -++-+++..++.|+
T Consensus 254 ~~il~g~~~~~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~~~~a~ 333 (503)
T 1hcu_A 254 MYLYDPVAFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLNEQKYIDFGI 333 (503)
T ss_dssp HHHHCTTTTHHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCcccccHHHHHHHH
Confidence 677732 001124568899999988776542 11 122355556677887641 12334667888898
Q ss_pred HHHHHHhhccc-CCCCCCcceeecCCCCCCC-CCCCC-C-------Cccccccccch--hhH----HHHHHHhCCchHHH
Q 008300 203 DIADRLLPAWN-TRTGIPYNVINLAHGNPHN-PSWTG-G-------ESILADSGTEQ--LEL----IALSQRTGDPKYRQ 266 (570)
Q Consensus 203 dLadrLLpAFd-TptGiP~~~vNl~~g~~~~-~~~~~-~-------~s~lAe~GSl~--LEF----~~LS~lTGd~kY~~ 266 (570)
+|++--.-+++ |||||.--.+++..+.... +.-.. + .....+ +... -|+ -+|-|+||||+|.+
T Consensus 334 ~L~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~y~LRPE~iES~fylyR~TgD~~yre 412 (503)
T 1hcu_A 334 KLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTA-PYYILRPETLESLYYAYRVTGDSKWQD 412 (503)
T ss_dssp HHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEE-CCBCCCCHHHHHHHHHHHHHCBHHHHH
T ss_pred HHHHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceecc-ccccCChHHHHHHHHHHHHhCCHHHHH
Confidence 88888777775 7999977677775443110 00000 0 000111 1112 243 46999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecccCchHH--HHHHHHHHhcCCCCC
Q 008300 267 KAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFY--EYLLKVWIQGNKTSA 326 (570)
Q Consensus 267 ~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfY--EYLLK~~iL~g~~d~ 326 (570)
.+-++++.|.+....++=+...-|+.+.. .-...-.-.||+ |-|-=.|+|+.+.+.
T Consensus 413 ~gw~if~ai~k~~r~~~Gya~i~dV~~~~----~~~~~D~meSF~laETLKYlYLLFsd~~~ 470 (503)
T 1hcu_A 413 LAWEALSAIEDACRAGSAYSSINDVTQAN----GGGASDDMESFWFAEALKYAYLIFAEESD 470 (503)
T ss_dssp HHHHHHHHHHHHHEETTEECCBSCTTSTT----CSCBCSCBCHHHHHTHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHHHHhhccCCcccccccCCC----CCCcCCccchHHHHHHHHHHheeccCCcc
Confidence 99999999998433333344445665511 011223457887 777666889987663
No 26
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=95.69 E-value=0.47 Score=50.06 Aligned_cols=252 Identities=10% Similarity=-0.017 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHh
Q 008300 197 FLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELN 276 (570)
Q Consensus 197 lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~ 276 (570)
|.+.+..|.+.-..++|.. |. ..++.. |.+... ..--+---|-++-=|....+ ||++.|.++|+++.+.|.
T Consensus 13 l~~~~~~ll~f~~~~~d~~-GF--~~ld~~-g~~~~~----~~k~~~~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~ 83 (421)
T 2zbl_A 13 LEQETDRIFNFGKNAVVPT-GF--GWLGNK-GQIKEE----MGTHLWITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMN 83 (421)
T ss_dssp HHHHHHHHHHHHGGGEETT-EE--CCBCTT-SCBCGG----GCEEHHHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCcCCC-Cc--ceECCC-CCCCCC----chhhHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHH
Confidence 4456666666656667744 63 233332 322111 00111112222333555555 999999999999999998
Q ss_pred hc-CCC--CCCcceEecCCCCCCCCCeeeecccCc--hHH-HHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhcccC
Q 008300 277 KT-FPA--DGLLPIYISPDRGTPSYSTITFGAMGD--SFY-EYLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRST 350 (570)
Q Consensus 277 ~~-~~~--~GL~p~~id~~tg~~~~~~~t~Ga~~D--SfY-EYLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~~ 350 (570)
+. ... .|++ -.+|.+. ... -..+.. .|. .-++- |..+|+.+ + ++.=.++.+-+.+++....
T Consensus 84 ~~~~D~~~GG~~-~s~d~dg-~~~-----~~k~lyd~Af~i~al~~-~~~tg~~~----~-l~~a~~~~~~l~~~~~d~~ 150 (421)
T 2zbl_A 84 GALRDKKYGGWY-ACVNDQG-VVD-----ASKQGYQHFFALLGAAS-AVTTGHPE----A-RKLLDYTIEVIEKYFWSEE 150 (421)
T ss_dssp TTTBCTTTSSBC-SEEETTE-EEE-----CCEEHHHHHHHHHHHHH-HHTTTCTT----H-HHHHHHHHHHHHHHTEETT
T ss_pred HhccCcCCCeEE-EEeCCCC-CcC-----CchhHHHHHHHHHHHHH-HHHhCCcc----H-HHHHHHHHHHHHHHhccCC
Confidence 84 222 2455 4555432 111 111111 111 11222 56677654 4 5555666677777654432
Q ss_pred CCCCeeeeccCCCcc--cccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccceeEeecCCC
Q 008300 351 PSSFTYICEKNGDSL--IDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQ 428 (570)
Q Consensus 351 ~~~~~~v~~~~g~~~--~~~m~hLsCF~pGmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~ 428 (570)
.+++........... ...+..+...+-+++.++.... .+++++.|+++++.|.......++|..+|.|. .+.
T Consensus 151 ~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tg----d~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~--~~~ 224 (421)
T 2zbl_A 151 EQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTH----DKKWLDRALRIASVIIHDVARNGDYRVNEHFD--SQW 224 (421)
T ss_dssp TTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTC----CTHHHHHHHHHHHHHCCCCCGGGTTCCCCEEC--TTS
T ss_pred CCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhC----CHHHHHHHHHHHHHHHHHhccCCCCchhhhcC--Ccc
Confidence 222211111111111 1122222223445555554332 46899999999999876655556788888863 321
Q ss_pred c----cccccCCCCCc-----hh-HHHHHHh---HHhhc---CC--c-hHHHHHHHHHHHHHHhccc
Q 008300 429 D----MSVGTSWNILR-----PE-TVESLFY---LWRLT---GN--K-TYKEWGWNIFQAFEKNSRI 476 (570)
Q Consensus 429 ~----~~~~~~~y~LR-----PE-~IESlfy---LyR~T---gD--~-~Yre~gW~if~ai~~~~r~ 476 (570)
. ....++....| |= .||..+. ++++| || + .|.++|-++++.+.++.--
T Consensus 225 ~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d 291 (421)
T 2zbl_A 225 NPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWA 291 (421)
T ss_dssp CBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBS
T ss_pred ccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcC
Confidence 1 01122333443 43 2676554 48888 67 7 8999999999999777654
No 27
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.27 E-value=0.24 Score=53.35 Aligned_cols=216 Identities=9% Similarity=0.009 Sum_probs=115.9
Q ss_pred hhhhccccceeeccCCChHHHHHHHHHHHHHhhccc-CCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHH-HH
Q 008300 178 TIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWN-TRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELI-AL 255 (570)
Q Consensus 178 tIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFd-TptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~-~L 255 (570)
.-.++=+|+-+|.+++|+.+++.|.++||.|+.-|. |+.|.-+.. .+ .+ .....+.--|.+.|. .+
T Consensus 147 ~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~------~~-~~-----~q~WiD~lyM~~pfla~~ 214 (445)
T 3k11_A 147 AGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARN------RP-QR-----NTLWLDDMFMGIPAVAQM 214 (445)
T ss_dssp THHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBC------SS-ST-----TEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeec------CC-CC-----CceEecchhhHHHHHHHH
Confidence 344556789999999999999999999999999884 777766521 11 11 122334333455554 58
Q ss_pred HHHhCCch--HHHHHHHHHHHHhh-c-CCCCCCcceEecCCCCCCCCCeeeecccCchHHHH-HHHHHHhcCCCC-Cccc
Q 008300 256 SQRTGDPK--YRQKAEKVIVELNK-T-FPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEY-LLKVWIQGNKTS-AVKP 329 (570)
Q Consensus 256 S~lTGd~k--Y~~~a~~i~~~L~~-~-~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEY-LLK~~iL~g~~d-~~~~ 329 (570)
+++|||++ |.+.|.+-+....+ . .+..||+-.-.+.+.+.. ....|| +|..-|=| |...+-...+.. .-+.
T Consensus 215 ~~~tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~~~~~--~~~~Wa-RGnGW~~~gl~~~l~~lp~~~~~r~~ 291 (445)
T 3k11_A 215 SRYDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTDH--PAFCWA-RANGWALLTACELLDVLPEDYPQRPK 291 (445)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTCSSC--CCCCBH-HHHHHHHHHHHHHHHHSCTTCTTHHH
T ss_pred HHHHCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecCCCCCC--Ccceec-ccchHHHHHHHHHHHhcccccccHHH
Confidence 99999999 99988887766665 2 245677766655433211 111111 11121111 222222222211 0023
Q ss_pred ccHHHHHHHHHHHHHhhcccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHh
Q 008300 330 YSRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNF 409 (570)
Q Consensus 330 ~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~ 409 (570)
+ .+.+.+.++++.++.. ++++-+.. .+...-....+.-++|+-|++- |.+..- .+++.+...|++..+++...
T Consensus 292 l-~~~~~~~a~~l~~~Q~---~~G~W~~v-ld~~~~y~EsSaTAmfaygllk-gvr~G~-Ld~~~Y~~~A~ka~~~L~~~ 364 (445)
T 3k11_A 292 V-MDYFRAHVRGVTALQS---GEGFWHQL-LDCNDSYLETSATAIYVYCLAH-AINKGW-IDAIAYGPVAQLGWHAVAGK 364 (445)
T ss_dssp H-HHHHHHHHHHHHTTCC---TTSCEESB-TTCTTSCEEHHHHHHHHHHHHH-HHHHTS-SCHHHHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHHHHHHHhCC---CCCchhhc-cCCCCCCCCccHHHHHHHHHHH-HHHcCC-CCHHHHHHHHHHHHHHHHHh
Confidence 4 5666666666666542 33432211 1111111233333445555544 333211 12457888888887776542
Q ss_pred hhcCCCCc
Q 008300 410 YQSTPTKL 417 (570)
Q Consensus 410 y~~t~tGl 417 (570)
..+.|.
T Consensus 365 --i~~dG~ 370 (445)
T 3k11_A 365 --INEEGQ 370 (445)
T ss_dssp --BCTTSC
T ss_pred --CCCCCC
Confidence 334553
No 28
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=94.22 E-value=2.4 Score=43.93 Aligned_cols=243 Identities=14% Similarity=0.102 Sum_probs=125.6
Q ss_pred HHHHHHh-hcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHh---CCchHHHHHHHHHHHHhhc
Q 008300 203 DIADRLL-PAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRT---GDPKYRQKAEKVIVELNKT 278 (570)
Q Consensus 203 dLadrLL-pAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lT---Gd~kY~~~a~~i~~~L~~~ 278 (570)
++....+ ..||...|=.+..++. .|.+. +. ...+---|-+..-|..+.+++ |++.|.++|+++.+.|.+.
T Consensus 21 ~~l~~w~~~~~D~~~GGf~~~~~~-dg~~~-~~----~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~ 94 (402)
T 1fp3_A 21 RVMAFWLEHSHDREHGGFFTCLGR-DGRVY-DD----LKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRH 94 (402)
T ss_dssp HHHHHHHHHSBCTTTSSBCCCBCT-TSCBS-CC----CEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCCCCCCEeeEECC-CCCCC-CC----ccchhhhHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHh
Confidence 4445555 5778777766666664 34443 21 122222333455677777876 9999999999999999984
Q ss_pred -CCC-C--CCcceEecCCCCCCCCCeeeecccCc--hHHH-HHHHHHHhcCCCCCcccccHHHHHHHHHHHHHhhcccCC
Q 008300 279 -FPA-D--GLLPIYISPDRGTPSYSTITFGAMGD--SFYE-YLLKVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRSTP 351 (570)
Q Consensus 279 -~~~-~--GL~p~~id~~tg~~~~~~~t~Ga~~D--SfYE-YLLK~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~~~ 351 (570)
... . |++ ..+|.+. .+. ....... .|+= -++-.|..+|+.+ | ++.=.+.++.|.+++... +
T Consensus 95 ~~d~~gg~g~~-~s~d~dg-~~~----~~~~~lyd~af~~~a~~~~~~atgd~~----~-~~~A~~l~~~~~~~~~d~-~ 162 (402)
T 1fp3_A 95 ARVAPPEKKCA-FVLTRDG-RPV----KVQRSIFSECFYTMAMNELWRVTAEAR----Y-QSEAVDMMDQIVHWVRED-P 162 (402)
T ss_dssp TBSSTTSCCBC-SEECTTS-CEE----ECCSSSHHHHHHHHHHHHHHHHHCCHH----H-HHHHHHHHHHHHHHHHTC-G
T ss_pred ccCcCCCCceE-EEECCCC-Ccc----ccccchHHHHHHHHHHHHHHHHhCCHH----H-HHHHHHHHHHHHHHhccC-C
Confidence 332 2 455 5566433 211 1112211 2221 1234455677543 4 444455555555554311 2
Q ss_pred CCCeeeeccCCCccccccc---ccccccchhhh---hhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCCccceeEeec
Q 008300 352 SSFTYICEKNGDSLIDKMD---ELACFAPGMIA---LGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFR 425 (570)
Q Consensus 352 ~~~~~v~~~~g~~~~~~m~---hLsCF~pGmla---LG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~ 425 (570)
.++ |-......+....+. |+. -.+++ +... . ...+++.|+++.+.+... ....+|..+|.++-
T Consensus 163 ~G~-f~~~~~~~~~~~~~~~~m~~~---~~~l~l~~l~~~--~---~~~~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~- 231 (402)
T 1fp3_A 163 SGL-GRPQLPGAVASESMAVPMMLL---CLVEQLGEEDEE--L---AGRYAQLGHWCARRILQH-VQRDGQAVLENVSE- 231 (402)
T ss_dssp GGG-CCCCCTTSCCEEETHHHHHHH---HHHHHHHTTCHH--H---HHHTHHHHHHHHHHHHTT-EETTTTEECSEEET-
T ss_pred Ccc-cCccccCccCCCCcchHHHHH---HHHHHHHHHHHh--c---CcHHHHHHHHHHHHHHHH-hCcCCCeEEEEECC-
Confidence 222 211111111111110 111 11222 1111 0 123667777777777665 44456777877652
Q ss_pred CCCccccccCCCCCchh-HHHH---HHhHHhhcCCchHHHHHHHHHHHH-HHhcc
Q 008300 426 DGQDMSVGTSWNILRPE-TVES---LFYLWRLTGNKTYKEWGWNIFQAF-EKNSR 475 (570)
Q Consensus 426 ~~~~~~~~~~~y~LRPE-~IES---lfyLyR~TgD~~Yre~gW~if~ai-~~~~r 475 (570)
+.+. .+....+..+|- -||. +.-++++|||+.|.+.|-++++.+ .++..
T Consensus 232 dw~~-~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~~~~ 285 (402)
T 1fp3_A 232 DGEE-LSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGW 285 (402)
T ss_dssp TSCB-CCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHB
T ss_pred CCCc-cCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhc
Confidence 1110 000011234554 4885 555577799999999999999998 55543
No 29
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=92.42 E-value=2.3 Score=44.55 Aligned_cols=196 Identities=12% Similarity=0.075 Sum_probs=109.1
Q ss_pred ccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCC
Q 008300 246 GTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTS 325 (570)
Q Consensus 246 GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g~~d 325 (570)
|-+.--+..+.+.|||++|.+.|++.++.+.+.... ..|.+++ + .++ -|+..|-++|+..
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~~~~------~~n~D~~----------~---~~~-~l~~lY~~Tgd~~ 130 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGAT------TKNVNTM----------A---PFL-TLAYRFEETGRMA 130 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC------CCCTTTT----------T---THH-HHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcCCCC------cCcccch----------H---HHH-HHHHHHHHhCCHH
Confidence 445666888999999999999999999877663211 0122221 1 122 3578899998744
Q ss_pred CcccccHHHHHHHHHHHHHhhcccCCCCCeeeeccCCCcccccccccccc--cchhhhhhcCCCCCCCchHHHHHHHHHH
Q 008300 326 AVKPYSRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACF--APGMIALGSSGYGPGDSEKFLSLAEELA 403 (570)
Q Consensus 326 ~~~~~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF--~pGmlaLG~~~~~~~~~~~~l~lA~~L~ 403 (570)
| ++.-.++.+.+.+...+...+++.+........-....| .|| .|.+.-++... +.+++++.|..-+
T Consensus 131 ----Y-l~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~WiD--gl~M~~p~La~~~~~t----gd~~y~d~A~~q~ 199 (382)
T 3pmm_A 131 ----Y-LPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDD--TLMMTVLPLAKIGKLL----NRPQYVEEATYQF 199 (382)
T ss_dssp ----G-HHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEETT--HHHHTHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ----H-HHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEEec--chhhhHHHHHHHHHHH----CCHHHHHHHHHHH
Confidence 6 555555555554322222222222111000000011122 233 22323344322 2578999997777
Q ss_pred HHHHHhhhcCCCCccceeEeecCCCcc---c--cccCCCCCchhHHHHHHhHHhh-------cCCchHHHHHHHHHHHHH
Q 008300 404 WTCYNFYQSTPTKLAGENYFFRDGQDM---S--VGTSWNILRPETVESLFYLWRL-------TGNKTYKEWGWNIFQAFE 471 (570)
Q Consensus 404 ~tC~~~y~~t~tGl~PE~~~f~~~~~~---~--~~~~~y~LRPE~IESlfyLyR~-------TgD~~Yre~gW~if~ai~ 471 (570)
.++.+......||+--..+++...+.. . -+..|++ =.+=-++|. |+++.|.++..++..++.
T Consensus 200 ~~~~~~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~------~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~ 273 (382)
T 3pmm_A 200 LLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLT------MVIPDFLELVDLPEGNAVRRYLITVLDAQIAALA 273 (382)
T ss_dssp HHHHHHHBCTTTSCBCSEEETTTTBCTTCCCBHHHHHHHH------HHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCCCeeeeccCCCCCCCCcceecccccHHH------HHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHH
Confidence 777766555678998777776543210 0 1233321 122222333 678899999999999999
Q ss_pred HhcccCcC
Q 008300 472 KNSRIESG 479 (570)
Q Consensus 472 ~~~r~~~G 479 (570)
++-. +.|
T Consensus 274 ~~q~-~~G 280 (382)
T 3pmm_A 274 ECQD-DSG 280 (382)
T ss_dssp HHCC-TTS
T ss_pred HcCC-CCC
Confidence 9865 566
No 30
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.42 E-value=6 Score=42.53 Aligned_cols=269 Identities=14% Similarity=0.139 Sum_probs=132.7
Q ss_pred cceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCC--CCCC------CCccc--cccccchhhHHH
Q 008300 185 LLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNP--SWTG------GESIL--ADSGTEQLELIA 254 (570)
Q Consensus 185 LLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~--~~~~------~~s~l--Ae~GSl~LEF~~ 254 (570)
|.-+|.-.=...--+.-++..|+++.-+++.| |+..+|-.+|+.... .|.. +.-.+ =+-|-+.--+..
T Consensus 16 ~~~~~~~~~~~~~~~~i~~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~gl~~ 93 (445)
T 3k11_A 16 LQPAYQGTYGDLTPEQVKKDIDRVFAYIDKET--PARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEWGVTYSALIA 93 (445)
T ss_dssp SCCCCSSCCSCCCHHHHHHHHHHHHHHHHHTS--CCCEEETTTCCEECCTTTCCTTEEECCCSSCTTSHHHHHHHHHHHH
T ss_pred cCCCCCCCCCcCCHHHHHHHHHHHHHHHhccC--cceeecCCCCceeccccccccccccccCCcccCccCHHHHHHHHHH
Confidence 44555544434444556666777765555433 445566655552111 1211 00001 012445567889
Q ss_pred HHHHhCCchHHHHHHHHHHHHhhcCC--------CCCCcceEec-CCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCC
Q 008300 255 LSQRTGDPKYRQKAEKVIVELNKTFP--------ADGLLPIYIS-PDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTS 325 (570)
Q Consensus 255 LS~lTGd~kY~~~a~~i~~~L~~~~~--------~~GL~p~~id-~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g~~d 325 (570)
+.+.|||++|.+.|++.++.|.+..+ ..++...+-+ ...+ ..+. .|. +---|++.|-++++.+
T Consensus 94 ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~-~LDD---~g~----~~~~Li~lY~~T~d~~ 165 (445)
T 3k11_A 94 AAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPH-ALDD---AGA----VCTAMIKLRLKDESLP 165 (445)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCC-SGGG---THH----HHHHHHHHHHHCTTCC
T ss_pred HHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCC-cchh---HHH----HHHHHHHHHHhcCCHH
Confidence 99999999999999999987764210 1111110100 0000 1111 121 2234667887887644
Q ss_pred CcccccHHHHHHHHHHHHHhhcccCCCCCeeeeccCCCcccccccccccccchhhh-hhcCCCCCCCchH--HHHHHHHH
Q 008300 326 AVKPYSRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIA-LGSSGYGPGDSEK--FLSLAEEL 402 (570)
Q Consensus 326 ~~~~~~~~~y~~A~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmla-LG~~~~~~~~~~~--~l~lA~~L 402 (570)
| ++.-.+..+.+.+..-+...+++.+-... .. .-+.|-|- -.+=.++ +|. ..+ .++ +++.|..-
T Consensus 166 ----y-l~~a~~~ad~L~~~~pRt~~Ggf~h~~~~-~~--q~WiD~ly-M~~pfla~~~~-~tg---d~~~~y~d~A~~q 232 (445)
T 3k11_A 166 ----V-DGLIQNYFDFIINKEYRLADGTFARNRPQ-RN--TLWLDDMF-MGIPAVAQMSR-YDK---EAKNKYLAEAVKQ 232 (445)
T ss_dssp ----C-HHHHHHHHHHHHHTSCBCTTCCBCBCSSS-TT--EEETHHHH-HHHHHHHHHHH-HCG---GGHHHHHHHHHHH
T ss_pred ----H-HHHHHHHHHHHHHcCCCCCCCceeecCCC-CC--ceEecchh-hHHHHHHHHHH-HHC---CcchHHHHHHHHH
Confidence 6 66666666666654433323333221100 00 11222220 1222222 332 222 456 88888777
Q ss_pred HHHHHHhhhcCCCCccceeEeecCCCc---c-ccccCCCCCchhHHHHHHhH-HhhcCCchHHHHHHHHHHHHHHhcccC
Q 008300 403 AWTCYNFYQSTPTKLAGENYFFRDGQD---M-SVGTSWNILRPETVESLFYL-WRLTGNKTYKEWGWNIFQAFEKNSRIE 477 (570)
Q Consensus 403 ~~tC~~~y~~t~tGl~PE~~~f~~~~~---~-~~~~~~y~LRPE~IESlfyL-yR~TgD~~Yre~gW~if~ai~~~~r~~ 477 (570)
...+.+......|||.=..+....+.. . .-+..|++.- ++|.+=+| -.-++++.+.++..++..++.++-. +
T Consensus 233 ~~~~~~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~g--l~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~-~ 309 (445)
T 3k11_A 233 FLQFADRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLT--ACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQS-G 309 (445)
T ss_dssp HHHHHHHHEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHH--HHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCC-T
T ss_pred HHHHHHhcccCCCCCEeeeecCCCCCCCcceecccchHHHHH--HHHHHHhcccccccHHHHHHHHHHHHHHHHHhCC-C
Confidence 777766555567888766655432211 0 0123333210 12221111 0126788899999999999988754 4
Q ss_pred cC
Q 008300 478 SG 479 (570)
Q Consensus 478 ~G 479 (570)
.|
T Consensus 310 ~G 311 (445)
T 3k11_A 310 EG 311 (445)
T ss_dssp TS
T ss_pred CC
Confidence 55
No 31
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=85.35 E-value=1.7 Score=46.85 Aligned_cols=100 Identities=19% Similarity=0.288 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHhhcccC------CCCCCcceeecCCCCCCCCCCCC-CCccccccccch---hhHHHHHHHhCCchHHH
Q 008300 197 FLEKARDIADRLLPAWNT------RTGIPYNVINLAHGNPHNPSWTG-GESILADSGTEQ---LELIALSQRTGDPKYRQ 266 (570)
Q Consensus 197 lL~KA~dLadrLLpAFdT------ptGiP~~~vNl~~g~~~~~~~~~-~~s~lAe~GSl~---LEF~~LS~lTGd~kY~~ 266 (570)
+|..-.+.+|.++..... ||-+-..-+|..++++-...++. ....++-+.|=| ==+..||.+||||+|.+
T Consensus 2 ~L~~v~~y~d~vl~~~~s~~~g~~~TPLlADG~D~~t~~pV~W~~pdg~~~~iSNfAsQQN~lR~L~~LS~lTgd~~Y~q 81 (543)
T 2v8i_A 2 RLTVVKQYVDNVLNKASDTYHGDKPSPLLADGVDPRTGQQLEWIFPDGRRAVLSNFSAQQNLMRVMSGLSQLSGDPRYQK 81 (543)
T ss_dssp HHHHHHHHHHHHHHHTBCCSSTTSCCSCBCSEECTTTCCBCEEECTTSCEEEEECGGGCHHHHHHHHHHHHHHCCTHHHH
T ss_pred hHHHHHHHHHHHHHhccCcccCCCCCceeccccccCCCCceeeeCCCCCccccccHHHHHHHHHHHHHHhhccCCHHHHH
Confidence 355556677777665543 33344456777777664433332 234455555544 23567999999999999
Q ss_pred HHHHHHHHHhhc-CCCCCCcc----eEecCCCCCC
Q 008300 267 KAEKVIVELNKT-FPADGLLP----IYISPDRGTP 296 (570)
Q Consensus 267 ~a~~i~~~L~~~-~~~~GL~p----~~id~~tg~~ 296 (570)
.|..+.+..... ....||+= .+||-+|.+.
T Consensus 82 ~A~~~~~yf~dh~vd~sGL~~WGGHrFi~L~tl~~ 116 (543)
T 2v8i_A 82 RAEDIVRYHFQNYQDPSGLLYWGGHRFVDLKTLQP 116 (543)
T ss_dssp HHHHHHHHHHHHSBCTTSCBSCSTTCEEETTTCCE
T ss_pred HHHHHHHHHHHcccCCCCceeecCceeEeccccCc
Confidence 999999998885 35567752 5677776553
No 32
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=83.07 E-value=4.6 Score=42.18 Aligned_cols=137 Identities=18% Similarity=0.258 Sum_probs=89.5
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHhhcCCC--------CCcc--------ccccchhhhhccccceeeccCCCh---HHHH
Q 008300 139 LYSMCLFWRISDYSFSSEFMWIANSLDFN--------KSYD--------ASVFETTIRVVGGLLSAYDLSGDK---VFLE 199 (570)
Q Consensus 139 L~IMgl~~~~~~eEF~~A~~~V~~~ldF~--------~~~~--------VsvFEttIRvLGGLLSAY~LSgd~---~lL~ 199 (570)
...|+- +++|++-.+|.++++.=+ .++. .|--+-=+++.=+||=|..+=+++ .++.
T Consensus 72 Av~~~d-----~~~Fd~l~~wt~~~~~~~~l~aW~~~~~g~~~~~~d~~~~AtDgDl~IA~ALl~A~~~W~~~g~~~Y~~ 146 (363)
T 1kwf_A 72 AVCFNE-----QALFDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQ 146 (363)
T ss_dssp HHHTTC-----HHHHHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHH
T ss_pred HHHcCC-----HHHHHHHHHHHHHhcCCCCCeEEEECCCCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcchhHHH
Confidence 345788 999999999998766311 1121 123333467777888888777776 7999
Q ss_pred HHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCC-CCccccccccchhh-HHHHHHHhCCchHHHHHHHHHHHHhh
Q 008300 200 KARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTG-GESILADSGTEQLE-LIALSQRTGDPKYRQKAEKVIVELNK 277 (570)
Q Consensus 200 KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~-~~s~lAe~GSl~LE-F~~LS~lTGd~kY~~~a~~i~~~L~~ 277 (570)
.|+.|++.|+.-=-.| |.. .+.+ |. .|.. ..++++-. .+. |..+++.||++...+++++..+.|.+
T Consensus 147 ~A~~i~~~i~~~~~~~-~~~--~l~p--g~----~~~~~~~~npSY~---~p~~~~~fa~~~~~~~W~~~~~~~~~~l~~ 214 (363)
T 1kwf_A 147 EARTLINNLYNHCVEH-GSY--VLKP--GD----RWGGSSVTNPSYF---APAWYKVYAQYTGDTRWNQVADKCYQIVEE 214 (363)
T ss_dssp HHHHHHHHHHHHHBCT-TTC--CBCS--BS----SSCBTTBBCGGGC---CHHHHHHHHHHHCCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-CCe--EEec--cc----cCCCCCEecchhc---CHHHHHHHHHccCCchHHHHHHHHHHHHHH
Confidence 9999999988642223 221 0111 11 1211 12333322 233 47889999999999999998888887
Q ss_pred c---CCCCCCcceEecCC
Q 008300 278 T---FPADGLLPIYISPD 292 (570)
Q Consensus 278 ~---~~~~GL~p~~id~~ 292 (570)
. .+..||+|+.++.+
T Consensus 215 ~~~~~~~tGL~PDw~~~~ 232 (363)
T 1kwf_A 215 VKKYNNGTGLVPDWCTAS 232 (363)
T ss_dssp HTTTSTTSCCCCSSBCTT
T ss_pred HhhhcCCCCCCCcceeec
Confidence 4 35789999998764
No 33
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=82.41 E-value=0.53 Score=50.76 Aligned_cols=142 Identities=18% Similarity=0.261 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHhHhhccCch--hhhHHHHhcCCCCCChhHHHHHHHHHHhhcCCCCCc------c-ccccchhhhhccc
Q 008300 114 KVKDAMIHAWSSYEKYAWGQD--ELQLLYSMCLFWRISDYSFSSEFMWIANSLDFNKSY------D-ASVFETTIRVVGG 184 (570)
Q Consensus 114 ~Vk~aF~haw~~Y~k~Awg~D--EL~PL~IMgl~~~~~~eEF~~A~~~V~~~ldF~~~~------~-VsvFEttIRvLGG 184 (570)
++.+--...-++|.+|||--+ +++|||-=|- + + ....|..|+ + +.-|..---+|=.
T Consensus 317 ~~l~W~i~gLka~~~yAYd~~~N~~~Pm~~dG~-----d---------l-tgy~l~RdGYYG~KGtvl~~~p~~~~yll~ 381 (543)
T 2v8i_A 317 DLLKWTVDGLKAFAKYAYNDQDNTFRPMIANGQ-----D---------L-SNYTLPRDGYYGKKGTVLKPYKAGNEFLIS 381 (543)
T ss_dssp HHHHHHHHHHHHHHHHHEETTTTEECCEETTSC-----B---------C-TTEECSSCBTTBCTTCEECCEECCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCCCceeecccCCc-----C---------C-cCcccccccccCCCCCeeccccCCchhhHH
Confidence 334444455677888888544 7999887775 1 1 124444442 2 4556666667778
Q ss_pred cceeeccCCChHHHHHHHHHHHHH-hhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCch
Q 008300 185 LLSAYDLSGDKVFLEKARDIADRL-LPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPK 263 (570)
Q Consensus 185 LLSAY~LSgd~~lL~KA~dLadrL-LpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~k 263 (570)
++-||.+|+|+.|.+.|..++.++ +-.++++.|= -..||..+... +. -+.+-...|.+.|++++
T Consensus 382 ~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~~~~~-~~~~~~~~~~~---------sp-----~lL~allEL~~atq~~~ 446 (543)
T 2v8i_A 382 YARAYAIDNDPLLWKVARGIANDQGLGDIGTAPGK-EVKVNMDTTNS---------DP-----YALFALLDLYHASQVAD 446 (543)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHTTCEECTTBTTB-SCEECTTCCCC---------CH-----HHHHHHHHHHHHHCCHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHhhCCccccCCCcCc-ccccccCCCCc---------CH-----HHHHHHHHHHHHhCCHH
Confidence 899999999999999999999987 4445554332 22344442211 11 13466788999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCc
Q 008300 264 YRQKAEKVIVELNKTFPADGLL 285 (570)
Q Consensus 264 Y~~~a~~i~~~L~~~~~~~GL~ 285 (570)
|.+.|.++-+.|.++.-..|||
T Consensus 447 ~l~lA~~~g~nl~~~~~~~G~F 468 (543)
T 2v8i_A 447 YRKLAEKIGDNIIKIRYIDGFF 468 (543)
T ss_dssp HHHHHHHHHHHHHHHHEETTEE
T ss_pred HHHHHHHHHHHHHHHhhcCcee
Confidence 9999999999999876667775
No 34
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=74.70 E-value=7.5 Score=40.91 Aligned_cols=115 Identities=13% Similarity=0.044 Sum_probs=71.6
Q ss_pred cceeeccCCChHHHHHHHHHHHHHhhcccCCCC-CCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCch
Q 008300 185 LLSAYDLSGDKVFLEKARDIADRLLPAWNTRTG-IPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPK 263 (570)
Q Consensus 185 LLSAY~LSgd~~lL~KA~dLadrLLpAFdTptG-iP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~k 263 (570)
|+.++..++++.+++.+++..+.++.-+. ++| .|... ..+......|-.|..- + .+=+..+.+.++|++
T Consensus 240 Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~-~~g~wp~~~---~~~~~~~~~wChG~~G---i---~~~l~~~~~~~~~~~ 309 (411)
T 3e6u_A 240 LMQPSLQVSQGKLHSLVKPSVDYVCQLKF-PSGNYPPCI---GDNRDLLVHWCHGAPG---V---IYMLIQAYKVFREEK 309 (411)
T ss_dssp HTCGGGCCCHHHHHHTHHHHHHHHHHTCC-TTSCCCSBT---TCCCCCCCSSSSSHHH---H---HHHHHHHHHHHCCHH
T ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHhhc-cCCCCCCCC---CcccCccccccCCcHH---H---HHHHHHHHHHcCCHH
Confidence 66777888899999999999999987654 344 23211 1111222345443332 2 223667778999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCC
Q 008300 264 YRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTS 325 (570)
Q Consensus 264 Y~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g~~d 325 (570)
|.+.|.++.+.+++. |+. ..+..+..+. . .--+.|++.|-.+|+.+
T Consensus 310 ~~~~a~~~~~~~~~~----g~~-----~~~~~lChG~-----a--G~~~~ll~~~~~t~~~~ 355 (411)
T 3e6u_A 310 YLCDAYQCADVIWQY----GLL-----KKGYGLCHGS-----A--GNAYAFLTLYNLTQDMK 355 (411)
T ss_dssp HHHHHHHHHHHHHHH----CSB-----TTCSCSTTSH-----H--HHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHhc----Ccc-----CCCCceecCh-----H--HHHHHHHHHHHHhCCHH
Confidence 999999999999884 221 0111122222 2 23467899998888643
No 35
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=74.29 E-value=12 Score=39.22 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=84.6
Q ss_pred hhHHHHHHHHHHhhcCCCCC----------c-----cccccchhhhhccccceeeccCCCh---HHHHHHHHHHHHHhhc
Q 008300 150 DYSFSSEFMWIANSLDFNKS----------Y-----DASVFETTIRVVGGLLSAYDLSGDK---VFLEKARDIADRLLPA 211 (570)
Q Consensus 150 ~eEF~~A~~~V~~~ldF~~~----------~-----~VsvFEttIRvLGGLLSAY~LSgd~---~lL~KA~dLadrLLpA 211 (570)
+++|++-.+|.++++.=..+ + ..+--+-=+++.=+||=|..+=+++ .++..|+.|++.|+.-
T Consensus 94 ~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~g~~~~d~n~AtDgDl~IA~ALl~A~~~Wg~~g~~~Y~~~A~~il~~i~~~ 173 (386)
T 1v5d_A 94 QKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYLKEAQDMITKGIKA 173 (386)
T ss_dssp HHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCCCCcCCCCCCCCHHHHHHHHHHHHHHHHcCCCchHhHHHHHHHHHHHHHHh
Confidence 88999999999987651111 1 1233444466677777777777776 8999999999988764
Q ss_pred c-cCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhc---C-CCCCCcc
Q 008300 212 W-NTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKT---F-PADGLLP 286 (570)
Q Consensus 212 F-dTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~---~-~~~GL~p 286 (570)
= ...+++ +.+.... .... ..++++-+ +.-=|..+.++|+++.+.+++++..+.|.+. . +..||+|
T Consensus 174 ~~~~~~~~----l~~g~~~-~~~~---~~~npSY~--~p~~l~~f~~~~~~~~W~~v~~~~~~~l~~~~~~~~~~tGL~P 243 (386)
T 1v5d_A 174 SNVTNNNQ----LNLGDWD-SKSS---LDTRPSDW--MMSHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYSPNTGLIS 243 (386)
T ss_dssp HHBCTTSS----BCSSTTS-CTTC---CCBCGGGC--CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHCTTTCCCC
T ss_pred cccCCCCe----eeecccC-CCCC---Ceechhhc--cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcCCCcCCCC
Confidence 2 222222 1121110 0011 12233321 1133888899999999988888888887653 2 5789999
Q ss_pred eEecC
Q 008300 287 IYISP 291 (570)
Q Consensus 287 ~~id~ 291 (570)
.++..
T Consensus 244 Dw~~~ 248 (386)
T 1v5d_A 244 DFVVK 248 (386)
T ss_dssp SSEET
T ss_pred cceec
Confidence 99988
No 36
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=72.84 E-value=15 Score=38.68 Aligned_cols=146 Identities=19% Similarity=0.140 Sum_probs=92.1
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHhhcCCCC-------------Cc----cccccchhhhhccccceeeccCC-----ChH
Q 008300 139 LYSMCLFWRISDYSFSSEFMWIANSLDFNK-------------SY----DASVFETTIRVVGGLLSAYDLSG-----DKV 196 (570)
Q Consensus 139 L~IMgl~~~~~~eEF~~A~~~V~~~ldF~~-------------~~----~VsvFEttIRvLGGLLSAY~LSg-----d~~ 196 (570)
..+|+- ++.|++-.+|..+++.... ++ ..|--+-=+++.=+||=|..+=+ +..
T Consensus 79 Av~~~d-----~~~FD~l~~wt~~~l~~~~~~~~~L~aW~~~~~~~~~~~n~AtDgDl~IA~ALl~A~~~Wg~~~g~~~~ 153 (396)
T 1wu4_A 79 AVQMDR-----KDIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFN 153 (396)
T ss_dssp HHHTTC-----HHHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTCC
T ss_pred HHHcCC-----HHHHHHHHHHHHHHhccCCcccCCCceEEECCCCCcCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCcHH
Confidence 345788 9999999999998653221 11 23445555677777888877767 578
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCcceeecCCC-CCCCCCCCCCCccccccccchhhHHHH-HH---HhCCchHHHHHHHH
Q 008300 197 FLEKARDIADRLLPAWNTRTGIPYNVINLAHG-NPHNPSWTGGESILADSGTEQLELIAL-SQ---RTGDPKYRQKAEKV 271 (570)
Q Consensus 197 lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g-~~~~~~~~~~~s~lAe~GSl~LEF~~L-S~---lTGd~kY~~~a~~i 271 (570)
++..|+.|++.|+.-=-...|-|. ++.... ....+. +..++++-. ..-|.++ ++ .++++.+.+++++.
T Consensus 154 Y~~~A~~il~~i~~~~~~~~~~~~--l~p~~~~~~f~~~--~~~~npSY~---~pa~~~~fa~~~~~~~~~~W~~~~~~~ 226 (396)
T 1wu4_A 154 YSEQARKLLHTCVHNGEGGPGHPM--WNRDNKLIKFIPE--VEFSDPSYH---LPHFYELFSLWANEEDRVFWKEAAEAS 226 (396)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCS--BCTTTCCBCSSTT--CSEECGGGC---CHHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCCcce--ecCCCceeeecCC--CCeeChhhc---cHHHHHHHHHhcccccChhHHHHHHHH
Confidence 999999999999863211112221 222221 000111 112333332 2345555 55 67888899999999
Q ss_pred HHHHhhc-CCCCCCcceEecCCCCCCC
Q 008300 272 IVELNKT-FPADGLLPIYISPDRGTPS 297 (570)
Q Consensus 272 ~~~L~~~-~~~~GL~p~~id~~tg~~~ 297 (570)
.+.|.+. .+..||+|.++..+ |++.
T Consensus 227 ~~lL~~~~~~~tGL~PDw~~~d-g~~~ 252 (396)
T 1wu4_A 227 REYLKIACHPETGLAPEYAYYD-GTPN 252 (396)
T ss_dssp HHHHHHHSCTTTCCCCSSEETT-SSBC
T ss_pred HHHHHhcccCCCCCCCceeeec-Cccc
Confidence 8888874 56789999999875 5543
No 37
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=65.36 E-value=1.3e+02 Score=31.20 Aligned_cols=267 Identities=15% Similarity=0.113 Sum_probs=126.3
Q ss_pred HHHHHHhhcCCCCCccccccchhhhhccccceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCC
Q 008300 156 EFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSW 235 (570)
Q Consensus 156 A~~~V~~~ldF~~~~~VsvFEttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~ 235 (570)
-++.|.+.+.=..+.+.++|.-..=+.=-|+-.|.+++|+.+++.|.++.+.+....+.. ...
T Consensus 55 ll~~~~~~~~~~~~~~~~lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~~~l~~~----------------~~~- 117 (411)
T 3e6u_A 55 LLQQMERGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKR----------------SIT- 117 (411)
T ss_dssp HHHHHHHHTTTSCTTCCCSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCCSC----------------CCC-
T ss_pred HHHHHHhhcccCCCCCCCeeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccc----------------CCc-
Confidence 334444333222234567777555444457777889999999999999999987644310 111
Q ss_pred CCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecccCchHHHHHH
Q 008300 236 TGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLL 315 (570)
Q Consensus 236 ~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLL 315 (570)
.+...+....=...|.+.+||++. +.+..+.+.+.... +.+. ...+-.|.. .+-=.|+
T Consensus 118 -----~~~G~aG~l~~l~~ly~~~g~~~~---a~~~~~~l~~~~~~--------~~~~----~~dll~G~A--G~l~aLl 175 (411)
T 3e6u_A 118 -----FLCGDAGPLAVAAVLYHKMNNEKQ---AEDCITRLIHLNKI--------DPHA----PNEMLYGRI--GYIYALL 175 (411)
T ss_dssp -----TTTSTHHHHHHHHHHHHHTTCHHH---HHHHHHHHHGGGGG--------CTTC----CSSTTTSHH--HHHHHHH
T ss_pred -----cccCcHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHhcc--------cccC----ChhhhcCcH--HHHHHHH
Confidence 111122222335667889999863 44444444442110 0000 001111222 2223466
Q ss_pred HHHHhcCCCCCcccccHHHHHHHHHHHHHhhccc---CCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCc
Q 008300 316 KVWIQGNKTSAVKPYSRDMWETSMKGLLSLVRRS---TPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDS 392 (570)
Q Consensus 316 K~~iL~g~~d~~~~~~~~~y~~A~~~i~~ll~~~---~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLG~~~~~~~~~ 392 (570)
..+-.+++..+.+....+.-+..++..+++.... .+..+.| .+.+. ...-+-|= ++|.+.+=.+....-+.
T Consensus 176 ~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~--~w~~~-~~~G~aHG---~aGI~~~Ll~~~~~~~~ 249 (411)
T 3e6u_A 176 FVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMY--EWYQE-YYVGAAHG---LAGIYYYLMQPSLQVSQ 249 (411)
T ss_dssp HHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCC--CBTTB-CBCSTTTS---HHHHHHHHTCGGGCCCH
T ss_pred HHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcce--eecCc-cCCccccc---HHHHHHHHHHHHhhcCh
Confidence 6666667655332110111222222222221110 0111111 00010 00000010 22322211111111124
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCccceeEeecCCCccccccCCCCCchhHHHHHHhHHhhcCCchHHHHHHHHHHHHHH
Q 008300 393 EKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEK 472 (570)
Q Consensus 393 ~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TgD~~Yre~gW~if~ai~~ 472 (570)
+++.+.+++..+...... .+.|--|.... ... .....|----|=++-++..++++++|++|++.+-+..+.+-+
T Consensus 250 ~~~~~~i~~~l~~l~~~~--~~~g~wp~~~~--~~~--~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~ 323 (411)
T 3e6u_A 250 GKLHSLVKPSVDYVCQLK--FPSGNYPPCIG--DNR--DLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQ 323 (411)
T ss_dssp HHHHHTHHHHHHHHHHTC--CTTSCCCSBTT--CCC--CCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh--ccCCCCCCCCC--ccc--CccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 556666655554443332 23343332211 010 122356677889999999999999999999999999888766
Q ss_pred h
Q 008300 473 N 473 (570)
Q Consensus 473 ~ 473 (570)
.
T Consensus 324 ~ 324 (411)
T 3e6u_A 324 Y 324 (411)
T ss_dssp H
T ss_pred c
Confidence 5
No 38
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=65.34 E-value=18 Score=37.26 Aligned_cols=146 Identities=18% Similarity=0.102 Sum_probs=94.2
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHhhcCCCCCc----------------cccccchhhhhccccceeeccCCChHHHHHHH
Q 008300 139 LYSMCLFWRISDYSFSSEFMWIANSLDFNKSY----------------DASVFETTIRVVGGLLSAYDLSGDKVFLEKAR 202 (570)
Q Consensus 139 L~IMgl~~~~~~eEF~~A~~~V~~~ldF~~~~----------------~VsvFEttIRvLGGLLSAY~LSgd~~lL~KA~ 202 (570)
..+|+- +++|++-.+|..+++....++ ..|--+-=+++.=+||=|..+=+++.++..|+
T Consensus 58 Av~~~d-----~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~~~~~v~d~n~AtDgDl~IA~ALl~A~~~Wg~~~Y~~~A~ 132 (334)
T 1wzz_A 58 AASAGD-----LASFQSMWMWARTNLQHTNDKLFSWRFLKGHQPPVPDKNNATDGDLLIALALGRAGKRFQRPDYIQDAM 132 (334)
T ss_dssp HHHHTC-----HHHHHHHHHHHHHHTBCSSSSCBCSEEETTSSSSSCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHhCC-----HHHHHHHHHHHHHHhccCCCCceEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 455788 999999999999877533221 12333444677778888888888999999999
Q ss_pred HHHHHHhhc-ccCCCCCCcceeecCCCCCCCCCCC-CCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhc-C
Q 008300 203 DIADRLLPA-WNTRTGIPYNVINLAHGNPHNPSWT-GGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKT-F 279 (570)
Q Consensus 203 dLadrLLpA-FdTptGiP~~~vNl~~g~~~~~~~~-~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~-~ 279 (570)
.|++.|+.- ..+.+|.+. |..|... ..+. +..++++-. +.-=|..+++.++|....+++++..+.|.+. .
T Consensus 133 ~il~~i~~~~v~~~~g~~~----llPg~~g-f~~~~~~~~npSY~--~p~~~~~fa~~~~~~~W~~~~~~~~~ll~~~~~ 205 (334)
T 1wzz_A 133 AIYGDVLNLMTMKAGPYVV----LMPGAVG-FTKKDSVILNLSYY--VMPSLLQAFDLTADPRWRQVMEDGIRLVSAGRF 205 (334)
T ss_dssp HHHHHHHHHHEEEETTEEE----ECSCSSS-CBCSSEEEECGGGC--CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHhcccCCCCeEE----ECCCccc-ccCCCCCeechhhc--CHHHHHHHHHccCCchHHHHHHHHHHHHHHccc
Confidence 999998763 122223221 1111100 0000 011122221 1123777899999999999999999999874 4
Q ss_pred CCCCCcceEecC-C-CCCC
Q 008300 280 PADGLLPIYISP-D-RGTP 296 (570)
Q Consensus 280 ~~~GL~p~~id~-~-tg~~ 296 (570)
+..||.|..+.. + +|.+
T Consensus 206 ~~tGL~pDw~~~~~~~g~~ 224 (334)
T 1wzz_A 206 GQWRLPPDWLAVNRATGAL 224 (334)
T ss_dssp TTTTBCCSSEEEETTTCCE
T ss_pred CCCCCCccceeeecCCCCc
Confidence 578999999987 4 4554
No 39
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=48.36 E-value=14 Score=38.44 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=52.8
Q ss_pred HHHHHHhHHhhcCCchHHHHHHHHHHHHHHhcccCcCccccccCCCCCCCCCcchHHHHHHHHHHHHh
Q 008300 443 TVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLAETLKYLYLL 510 (570)
Q Consensus 443 ~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~~~Gya~i~dV~~~~~~D~meSFflaETLKYLYLL 510 (570)
++.+|....+.=+++.|++.|-+|.++|.++|-.+....+-.|.... ..-.-+|||.=.+||.|+-.
T Consensus 119 IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~~~~~~g~l~~~~d~~~~-~~~ln~SY~~~~a~~~f~~~ 185 (350)
T 3ren_A 119 IIKALLLANNRWNSFYYKFYAINIANSLLKHAEENETLVDYIDNYGK-GNTTTLCYLDLPTMKLLSQV 185 (350)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECSEECSSCB-CSEEEGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHccccCcccCCCCccCC-CCEeehHhcCHHHHHHHHHh
Confidence 78888888888999999999999999999999876433333344443 33456899999999999965
No 40
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=43.89 E-value=15 Score=38.01 Aligned_cols=110 Identities=12% Similarity=0.006 Sum_probs=66.1
Q ss_pred ChHHHHHHHHHHHHHhh-cccCCCCCCcce--eec--------CCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCc
Q 008300 194 DKVFLEKARDIADRLLP-AWNTRTGIPYNV--INL--------AHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDP 262 (570)
Q Consensus 194 d~~lL~KA~dLadrLLp-AFdTptGiP~~~--vNl--------~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~ 262 (570)
++.+++.|++..+.++. .|+.++|.-++. +.. .......+.|-.|.+-+ .+=+..+.+.|+|+
T Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi------~~~l~~~~~~~~d~ 298 (409)
T 2g0d_A 225 NEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGI------SLLYLYGGLALDND 298 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHH------HHHHHHHHHHTTCH
T ss_pred ChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHH------HHHHHHHHHHcCCH
Confidence 89999999999999864 354455532222 221 11122344564444322 24467788899999
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCC
Q 008300 263 KYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTS 325 (570)
Q Consensus 263 kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSfYEYLLK~~iL~g~~d 325 (570)
+|.+.|+++.+.+++. +.. .....+..+.. .-.+.|+..+-.+++.+
T Consensus 299 ~~~~~a~~~~~~~~~~----~~~-----~~~~~LCHG~a-------G~~~~l~~l~~~~~~~~ 345 (409)
T 2g0d_A 299 YFVDKAEKILESAMQR----KLG-----IDSYMICHGYS-------GLIEICSLFKRLLNTKK 345 (409)
T ss_dssp HHHHHHHHHHHHHHHH----CTT-----CCSCCTTTSHH-------HHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHHHh----ccC-----CCCCCCCChHH-------HHHHHHHHHHHHhCCHH
Confidence 9999999999999885 111 01111222222 23466778888888765
No 41
>3nnb_A Alginate lyase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 1.60A {Bacteroides ovatus} PDB: 3nfv_A*
Probab=43.71 E-value=11 Score=39.74 Aligned_cols=62 Identities=23% Similarity=0.175 Sum_probs=34.3
Q ss_pred cCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhh
Q 008300 213 NTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNK 277 (570)
Q Consensus 213 dTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~ 277 (570)
++|.|+||-+ +.|+.......+..+.+.....-.--....-++|||++|.++|.+++++-..
T Consensus 75 ~~~dg~Pyi~---rDG~~nP~~~~~d~~~l~~~~~a~~~LALAW~~TGd~~YA~kA~~iL~aWf~ 136 (382)
T 3nnb_A 75 SKPDGLPYIR---KDGQRNPELDKLDRNKLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNVWFL 136 (382)
T ss_dssp TSTTCCSCEE---CTTCCCGGGGGSSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCccc---ccCCCCCccccccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHC
Confidence 5788999943 2444322221111111221111122233445789999999999998888764
No 42
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=43.10 E-value=40 Score=34.61 Aligned_cols=95 Identities=8% Similarity=0.005 Sum_probs=63.1
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCC---ccceeEeecCCCccccccCCCCCchhHHHHHHhHHhhcC
Q 008300 379 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTK---LAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTG 455 (570)
Q Consensus 379 mlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tG---l~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~Tg 455 (570)
-|.++++..+ ..+|.+.|+.|...|.+--.....| |.|....|.... -...++.|.+- +.+-.+.+.|+
T Consensus 114 ALl~A~~~Wg---~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~-~~~~npSY~~p----~~~~~fa~~~~ 185 (334)
T 1wzz_A 114 ALGRAGKRFQ---RPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKD-SVILNLSYYVM----PSLLQAFDLTA 185 (334)
T ss_dssp HHHHHHHHHT---CHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSS-EEEECGGGCCH----HHHHHHHHHHC
T ss_pred HHHHHHHHhC---CHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCC-CCeechhhcCH----HHHHHHHHccC
Confidence 3445555443 3689999999999888654433333 335554443322 13456667542 44556778899
Q ss_pred CchHHHHHHHHHHHHHHhcccCcCcc
Q 008300 456 NKTYKEWGWNIFQAFEKNSRIESGYV 481 (570)
Q Consensus 456 D~~Yre~gW~if~ai~~~~r~~~Gya 481 (570)
|+.|++.+-...+-|.+.|-.+.|+.
T Consensus 186 ~~~W~~~~~~~~~ll~~~~~~~tGL~ 211 (334)
T 1wzz_A 186 DPRWRQVMEDGIRLVSAGRFGQWRLP 211 (334)
T ss_dssp CTHHHHHHHHHHHHHHHSCBTTTTBC
T ss_pred CchHHHHHHHHHHHHHHcccCCCCCC
Confidence 99999999999999988877666743
No 43
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=41.80 E-value=78 Score=33.62 Aligned_cols=106 Identities=23% Similarity=0.233 Sum_probs=65.4
Q ss_pred ChHHH-HHHHHHHHHHhhcccCCCC-CCcceeecCCC-----CC-------------------CCCCCCCCCcccccccc
Q 008300 194 DKVFL-EKARDIADRLLPAWNTRTG-IPYNVINLAHG-----NP-------------------HNPSWTGGESILADSGT 247 (570)
Q Consensus 194 d~~lL-~KA~dLadrLLpAFdTptG-iP~~~vNl~~g-----~~-------------------~~~~~~~~~s~lAe~GS 247 (570)
|.-|. +.|+.+||.|+ +|++|+| =|+. ++...- .. ..+.+. ...+=+.+.
T Consensus 75 ~~~y~s~~A~~iAd~ll-~~Q~~~GGW~kn-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~T~Dndd 150 (408)
T 1r76_A 75 AAWYTSKAARHVADVIV-SFQTPAGGWGKN-QPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWH--YVGTIDNDA 150 (408)
T ss_dssp GGGGGSHHHHHHHHHHH-HHCCTTSCCCSS-CCSSSCCCCTTCCSSCCCCCCCC---------CCCCCS--SSSBCGGGT
T ss_pred hhhhchHHHHHHHHHHH-HccccCCCCCCc-cccccccchhhhhcccccccccccccccchhhcccccC--CCCCCCCch
Confidence 55677 46999999998 5788775 4442 332211 00 000111 111222233
Q ss_pred chhhHHHHHHH----h--CCchHHHHHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecc
Q 008300 248 EQLELIALSQR----T--GDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGA 305 (570)
Q Consensus 248 l~LEF~~LS~l----T--Gd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga 305 (570)
-..|...|.++ | ++++|.+++.|.++.|..+....|=+|.+ ++++..+ .++|+|.-
T Consensus 151 Ta~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqF-dpdn~~y-~~~IpFnD 212 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQV-WPLEGGY-HDAITYND 212 (408)
T ss_dssp THHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSB-SSCCCGG-GGSEECGG
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCc-Ccccccc-ccCCCcCc
Confidence 34455555543 6 89999999999999999988888999886 4555433 35677743
No 44
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=40.79 E-value=65 Score=33.53 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=84.0
Q ss_pred HHhcCCCCCChhHHHHHHHHHHhhcCCC--------------CCccc------cccchhhhhccccceeeccCCChHHHH
Q 008300 140 YSMCLFWRISDYSFSSEFMWIANSLDFN--------------KSYDA------SVFETTIRVVGGLLSAYDLSGDKVFLE 199 (570)
Q Consensus 140 ~IMgl~~~~~~eEF~~A~~~V~~~ldF~--------------~~~~V------svFEttIRvLGGLLSAY~LSgd~~lL~ 199 (570)
.+|+- +++|++..+|..+++.=. .++.. |--+-=+++-=+||=|..+=+++.++.
T Consensus 44 v~~~d-----r~~FD~Lw~wt~~~l~~~d~~~~L~aW~w~~~~~g~~~v~D~nsAtDGDl~IA~ALl~A~~~Wg~~~Y~~ 118 (355)
T 3qxf_A 44 LAAND-----RAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTD 118 (355)
T ss_dssp HHTTC-----HHHHHHHHHHHHHHHSTTCTTTSCCCSEEEECTTSCEEEEECSCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhCC-----HHHHHHHHHHHHHHhccCCcccCCceEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 45788 999999999998876421 11221 223333666667777778888999999
Q ss_pred HHHHHHHHHhhcccCC-CCCCcceeecCCCCCCCCCCCC---CCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHH
Q 008300 200 KARDIADRLLPAWNTR-TGIPYNVINLAHGNPHNPSWTG---GESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVEL 275 (570)
Q Consensus 200 KA~dLadrLLpAFdTp-tGiP~~~vNl~~g~~~~~~~~~---~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L 275 (570)
.|+.|++.|+.-=-.+ +|. ...+.+ |. ..|.. ..++++- +.+-+.++-... ++...++++...+.|
T Consensus 119 ~A~~il~~I~~~~v~~~~g~-~~~Llp--G~---~gF~~~~~~~~nPSY---~~p~~~~~fa~~-~~~W~~l~~~~~~lL 188 (355)
T 3qxf_A 119 IGSALLKRIAREEVVTVPGL-GSMLLP--GK---VGFAEDNSWRFNPSY---LPPTLAQYFTRF-GAPWTTLRETNQRLL 188 (355)
T ss_dssp HHHHHHHHHHHHHEEEETTT-EEEECS--SS---SSSEETTEEEECTTS---SCHHHHHHHGGG-CTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCC-ceeecC--cc---cCccCCCCCeechhh---ccHHHHHHHHHh-CChHHHHHHHHHHHH
Confidence 9999999997632111 130 001111 10 01110 0122222 223344333333 888888888888888
Q ss_pred hhcCCCCCCcceEecCCC
Q 008300 276 NKTFPADGLLPIYISPDR 293 (570)
Q Consensus 276 ~~~~~~~GL~p~~id~~t 293 (570)
.+. ...||.|+.++.+.
T Consensus 189 ~~~-~~tGL~PDwv~~~~ 205 (355)
T 3qxf_A 189 LET-APKGFSPDWVRYEK 205 (355)
T ss_dssp HHT-CTTSCCCSSEEEET
T ss_pred HHh-hhcCCCCceEEecC
Confidence 875 47899999998763
No 45
>1rh5_C Secbeta; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.23.29.1 PDB: 1rhz_C 2yxq_C 2yxr_C 3kcr_C 3dkn_C 3bo1_C 3bo0_C
Probab=38.80 E-value=21 Score=27.30 Aligned_cols=44 Identities=18% Similarity=0.465 Sum_probs=10.9
Q ss_pred CCCcCCCCCCCCCCcccccCc-ccccc-CchhHHHHHHHHHHHHHH
Q 008300 1 MARNRSSSSSSSSGKLRYCNP-AYYLK-RPKRLAMLLIVFVSVTLV 44 (570)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 44 (570)
|||++-+...||.|-+||..- +-=+| .|+..+.+.++|++++++
T Consensus 1 Mak~~~~~~~ssaGLvryy~ee~~giKi~P~~Vl~~si~~i~~V~~ 46 (53)
T 1rh5_C 1 MSKREETGLATSAGLIRYMDETFSKIRVKPEHVIGVTVAFVIIEAI 46 (53)
T ss_dssp --------------------CCCCSCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCcccccchhhhhccCCccccCCeehhhhHHHHHHHHHH
Confidence 888876544457789999643 11233 345555555555555543
No 46
>3eu8_A Putative glucoamylase; YP_210071.1, structural genomics, JOI for structural genomics, JCSG; 2.12A {Bacteroides fragilis nctc 9343}
Probab=38.21 E-value=72 Score=34.12 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHHHHhhcccCC-CCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCC-------chHH
Q 008300 194 DKVFLEKARDIADRLLPAWNTR-TGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGD-------PKYR 265 (570)
Q Consensus 194 d~~lL~KA~dLadrLLpAFdTp-tGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd-------~kY~ 265 (570)
|..+|++-..=.=+-.-.|-+| ||+|..++....-.+.+. ...++++.+| |.-+|-+.+- ..-.
T Consensus 18 d~~~L~~~~r~T~~yF~~~~~p~~gL~~Dn~~~~~~~p~~~---a~~tS~tniG-----fgL~A~~vA~e~G~I~r~ea~ 89 (430)
T 3eu8_A 18 DDALMDTVQRRTFNYFWDAAEPNSGLARERYHMDGEYPAGG---PEIVTSGGSG-----FGIMAILAGIDRGYVSREEGL 89 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCTTTCCCBSEEETTCCCTTSC---TTEEEHHHHH-----HHHHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCcCCCCCCCccccCCCCCCC---CCccCCHHHH-----HHHHHHHHHHHcCCCCHHHHH
Confidence 4555554322222222233334 799998776542111111 1235566666 5556655532 2233
Q ss_pred HHHHHHHHHHhhcCCCCCCcceEecCCCCCCC
Q 008300 266 QKAEKVIVELNKTFPADGLLPIYISPDRGTPS 297 (570)
Q Consensus 266 ~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~ 297 (570)
+.++++++.|.+.....|.+++.+|..||+..
T Consensus 90 ~R~~~tL~~l~~~~r~~G~fyhwyD~~Tg~~l 121 (430)
T 3eu8_A 90 RRMEKIVGFLEKADRFKGAYPHWWNGETGHVQ 121 (430)
T ss_dssp HHHHHHHHHHHHSCCBTTBCCSEEETTTCCBC
T ss_pred HHHHHHHHHHHhchhcCCcCccccCCCCCCcC
Confidence 44555666666667778999999999999954
No 47
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=36.02 E-value=99 Score=32.10 Aligned_cols=136 Identities=17% Similarity=0.076 Sum_probs=93.0
Q ss_pred hcCCCCCChhHHHHHHHHHHhhcCCCCCc------------cccccchhhhhccccceeeccCCChHHHHHHHHHHHHHh
Q 008300 142 MCLFWRISDYSFSSEFMWIANSLDFNKSY------------DASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLL 209 (570)
Q Consensus 142 Mgl~~~~~~eEF~~A~~~V~~~ldF~~~~------------~VsvFEttIRvLGGLLSAY~LSgd~~lL~KA~dLadrLL 209 (570)
+|- ++.|++..+|..+++. + ++ .+|--.-=+|+.-.||=|...=+++.+...|+.|+..|+
T Consensus 75 ~~d-----~~~Fd~l~~~t~~~l~-~-~~L~sWr~~~~~~~~nNAtdgDl~IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~ 147 (350)
T 3ren_A 75 ANN-----KELFDEHFDIVKEMRL-K-NGLISWRKEGDENSPSSATIDELRIIKALLLANNRWNSFYYKFYAINIANSLL 147 (350)
T ss_dssp TTC-----HHHHHHHHHHHHTTBC-T-TSSBCSEEETTEECSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred cCC-----HHHHHHHHHHHHHHhc-c-CCceEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 477 9999999999988765 2 21 234444558888899999999999999999999999998
Q ss_pred hcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCCC--CCcce
Q 008300 210 PAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPAD--GLLPI 287 (570)
Q Consensus 210 pAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~--GL~p~ 287 (570)
. ....+|......+..++ +...+++-+ +.-=|..|.+. ++...+.+++..+.|.+..+.+ +|+|.
T Consensus 148 ~-~~~~~g~l~~~~d~~~~--------~~~ln~SY~--~~~a~~~f~~~--~~~W~~l~~~g~~lL~~g~p~D~~~l~~~ 214 (350)
T 3ren_A 148 K-HAEENETLVDYIDNYGK--------GNTTTLCYL--DLPTMKLLSQV--DKKWEGIYEKSNSIIENGKISEEVPLYRK 214 (350)
T ss_dssp H-HHEETTEECSEECSSCB--------CSEEEGGGC--CHHHHHHHHHH--CTHHHHHHHHHHHHHHTTBCCSSSCCBCS
T ss_pred H-HccccCcccCCCCccCC--------CCEeehHhc--CHHHHHHHHHh--cchHHHHHHHHHHHHHhCCCCcccccCCc
Confidence 7 22233433333333221 112223321 12346777777 5788899999999999854443 68999
Q ss_pred EecCCCCCCC
Q 008300 288 YISPDRGTPS 297 (570)
Q Consensus 288 ~id~~tg~~~ 297 (570)
..++.++++.
T Consensus 215 ~~~~~~~~y~ 224 (350)
T 3ren_A 215 VFYEETQKYD 224 (350)
T ss_dssp EEETTTTEEC
T ss_pred ccccCCCCcc
Confidence 8888775543
No 48
>2b4j_C PC4 and SFRS1 interacting protein; HIV, integration, transcription, viral protein, recombinatio; 2.02A {Homo sapiens} SCOP: a.48.4.1 PDB: 3f9k_C 3hpg_G 3u88_C* 3hph_E
Probab=35.82 E-value=29 Score=29.77 Aligned_cols=47 Identities=15% Similarity=0.160 Sum_probs=32.4
Q ss_pred hhHHHHHHhHHhhcCCchHHHHHHHHHHHHHHhcccCcCccccccCC
Q 008300 441 PETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVN 487 (570)
Q Consensus 441 PE~IESlfyLyR~TgD~~Yre~gW~if~ai~~~~r~~~Gya~i~dV~ 487 (570)
||.|+.+==+.|..|+...|+.|-.++..+...+-++.|..-+.+|.
T Consensus 50 pe~V~t~kklRry~g~q~Ir~kA~~iY~kfK~~f~~~eg~~~~~~~~ 96 (98)
T 2b4j_C 50 TEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL 96 (98)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHC--------------
T ss_pred hHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCchHHHHHh
Confidence 89999999999999999999999999999999999999988777763
No 49
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=33.71 E-value=25 Score=36.26 Aligned_cols=65 Identities=14% Similarity=0.055 Sum_probs=44.4
Q ss_pred cceeeccCCChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchH
Q 008300 185 LLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKY 264 (570)
Q Consensus 185 LLSAY~LSgd~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY 264 (570)
|+.+|..++|+.+++.|++.++.++.. .+. ..++. -|=.-+|...+ |..+.+.|+|++|
T Consensus 288 l~~~~~~~~d~~~~~~a~~~~~~~~~~----~~~-----------~~~~~-----LCHG~aG~~~~-l~~l~~~~~~~~~ 346 (409)
T 2g0d_A 288 YLYGGLALDNDYFVDKAEKILESAMQR----KLG-----------IDSYM-----ICHGYSGLIEI-CSLFKRLLNTKKF 346 (409)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH----CTT-----------CCSCC-----TTTSHHHHHHH-HHHHHHHHCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHh----ccC-----------CCCCC-----CCChHHHHHHH-HHHHHHHhCCHHH
Confidence 577888899999999999999988763 000 01111 11122233322 7889999999999
Q ss_pred HHHHHH
Q 008300 265 RQKAEK 270 (570)
Q Consensus 265 ~~~a~~ 270 (570)
.+.|.+
T Consensus 347 ~~~a~~ 352 (409)
T 2g0d_A 347 DSYMEE 352 (409)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988887
No 50
>1h12_A Endo-1,4-beta-xylanase; hydrolase, xylan degradation, psychrophilic, cold adaptation, temperature, glycosyl hydrolase, family 8; HET: XYP XYS; 1.2A {Pseudoalteromonas haloplanktis} SCOP: a.102.1.2 PDB: 1h13_A 1xw2_A 1xwq_A* 1h14_A 1xwt_A 2b4f_A* 2a8z_A*
Probab=32.32 E-value=85 Score=33.12 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=86.5
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHhhc----CC---------------CCCccc------cccchhhhhccccceeeccCC
Q 008300 139 LYSMCLFWRISDYSFSSEFMWIANSL----DF---------------NKSYDA------SVFETTIRVVGGLLSAYDLSG 193 (570)
Q Consensus 139 L~IMgl~~~~~~eEF~~A~~~V~~~l----dF---------------~~~~~V------svFEttIRvLGGLLSAY~LSg 193 (570)
-.+|+- ++.|++..+|+++++ .- +.++.+ |--+-=+++.=+||=|..+=+
T Consensus 87 Av~~~d-----r~~FD~L~~wtk~~l~~~~~~~~g~~~~l~aW~~g~~~~g~~~d~n~~sAtDgDl~IA~ALl~A~~~Wg 161 (405)
T 1h12_A 87 AVMLNK-----QEEFDNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARWG 161 (405)
T ss_dssp HHHTTC-----HHHHHHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCC-----HHHHHHHHHHHHHHhccccccccCCcccceEEEeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHcC
Confidence 345788 999999999998877 11 112221 122222666667777776666
Q ss_pred ---ChHHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHH-HHHHhCC----chHH
Q 008300 194 ---DKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIA-LSQRTGD----PKYR 265 (570)
Q Consensus 194 ---d~~lL~KA~dLadrLLpAFdTptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~-LS~lTGd----~kY~ 265 (570)
+..++..|+.|.+.|+.-= |.. ..+.+..+.. ..++++-. .+-|.+ +++.|++ +...
T Consensus 162 ~~g~~~Y~~~A~~il~~I~~~~--~~~---~~~~f~p~~~-------~~~npSY~---~pa~~~~fa~~~~~~~~~~~W~ 226 (405)
T 1h12_A 162 NSGEFNYYNDAITMLNTIKNKL--MEN---QIIRFSPYID-------NLTDPSYH---IPAFYDYFANNVTNQADKNYWR 226 (405)
T ss_dssp SSSSCCHHHHHHHHHHHHHHHS--EET---TEECSCTTCS-------SCBCGGGC---CHHHHHHHHHHCSSHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHhC--CCC---CeeEEecCCC-------CeeChhhc---CHHHHHHHHHhcccccCchhHH
Confidence 6789999999999998642 211 1233322211 11223322 234444 4888988 7788
Q ss_pred HHHHHHHHHHhhcC-CCCC----CcceEec-CCCCCC
Q 008300 266 QKAEKVIVELNKTF-PADG----LLPIYIS-PDRGTP 296 (570)
Q Consensus 266 ~~a~~i~~~L~~~~-~~~G----L~p~~id-~~tg~~ 296 (570)
+++++..+.|.+.. +..| |+|.++. .+ |++
T Consensus 227 ~v~~~~~~lL~~~~~~~tG~~~~L~PDw~~~~d-g~p 262 (405)
T 1h12_A 227 QVATKSRTLLKNHFTKVSGSPHWNLPTFLSRLD-GSP 262 (405)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTTTTCCCSCBCTT-SCB
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCchhHHhcC-CCc
Confidence 88888888887643 3478 9999998 65 554
No 51
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=32.21 E-value=43 Score=37.17 Aligned_cols=86 Identities=14% Similarity=0.188 Sum_probs=52.9
Q ss_pred ccccceeeccCCChHHHHHHHHHHHHHhhccc-CCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhC
Q 008300 182 VGGLLSAYDLSGDKVFLEKARDIADRLLPAWN-TRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTG 260 (570)
Q Consensus 182 LGGLLSAY~LSgd~~lL~KA~dLadrLLpAFd-TptGiP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTG 260 (570)
+=|.+--|.-|+|+.+|++|+++++.|..-|. .+.+-++ +-+-..+ . .+-+ . .|..|--.+-+.+|.++|+
T Consensus 309 ~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~-w~~~d~~-~-r~~~---d--~a~~gl~~iaLl~l~~~~~ 380 (586)
T 3h7l_A 309 LLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHF-WSANQDG-S-RPYF---H--AAEAGLPTIALCEYLAIED 380 (586)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSE-EBSSSSS-S-SBCC---C--TTTTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCc-CCCcccC-C-cccc---c--ccccHHHHHHHHHhhhhcC
Confidence 44556667889999999999999999998774 3333332 2111111 1 1111 1 1223333456778899999
Q ss_pred CchHHHHHHHHHHHH
Q 008300 261 DPKYRQKAEKVIVEL 275 (570)
Q Consensus 261 d~kY~~~a~~i~~~L 275 (570)
|+.+.+.|++.++.-
T Consensus 381 d~~~~~~a~~~i~~~ 395 (586)
T 3h7l_A 381 DSVQTESVKCIVNRA 395 (586)
T ss_dssp STTTTHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 987777776655543
No 52
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=30.98 E-value=1.1e+02 Score=31.49 Aligned_cols=103 Identities=26% Similarity=0.359 Sum_probs=64.2
Q ss_pred HHHHHH-----HHHHHHHhhcccCCCC-CCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHH---HhCCchHHH
Q 008300 196 VFLEKA-----RDIADRLLPAWNTRTG-IPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQ---RTGDPKYRQ 266 (570)
Q Consensus 196 ~lL~KA-----~dLadrLLpAFdTptG-iP~~~vNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~---lTGd~kY~~ 266 (570)
..|+|+ ...||.|+ +|++|+| =|+. ++..+-......+ ...+=+.+.-..|...|.+ .|++++|.+
T Consensus 23 ~~~~~~~~~w~~~~Ad~~l-~~Q~~~GGW~kn-~d~~~~~~~~~~~---~~~t~DnddTa~vl~~Larv~~~~~~~~y~~ 97 (332)
T 1gxm_A 23 NWLNNARTKWSASRADVVL-SYQQNNGGWPKN-LDYNSVGNGGGGN---ESGTIDNGATITEMVFLAEVYKSGGNTKYRD 97 (332)
T ss_dssp HHHHHHTTSSCGGGHHHHH-HTCCTTSCCCSC-CCTTTCCCCCCCC---SCEECGGGTTHHHHHHHHHHHHHHCCHHHHH
T ss_pred hhhcchHHHHHHHHHHHHH-HcCcCCCCCCcc-eecccccccCCCC---CCCCccCccHHHHHHHHHHHhccccchHHHH
Confidence 356666 44789888 5788775 5553 3443221111111 1222233333445555544 488999999
Q ss_pred HHHHHHHHHhhcCCCCCCcceEecCCCCCCCCCeeeecc
Q 008300 267 KAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGA 305 (570)
Q Consensus 267 ~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga 305 (570)
++.|+.+-|..+....|=+|.+ +++++.+ .++|+|.-
T Consensus 98 Ai~Rgl~wlL~mQ~~nGGWpqF-dpd~~~Y-l~~IpFnD 134 (332)
T 1gxm_A 98 AVRKAANFLVNSQYSTGALPQF-YPLKGGY-SDHATFND 134 (332)
T ss_dssp HHHHHHHHHHHHCCTTSCCBSE-ESCCSGG-GGSEECGG
T ss_pred HHHHHHHHHHhccCCCCCcccc-CCCcccc-cccCCcch
Confidence 9999999999998899999987 4555443 35678743
No 53
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=28.77 E-value=99 Score=32.47 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=58.5
Q ss_pred chHHHHHHHHHHHHHHHhhhcCC--CCcccee--EeecCCCccccccCCCCCchhHHHHHHhHHh----hcCCchHHHHH
Q 008300 392 SEKFLSLAEELAWTCYNFYQSTP--TKLAGEN--YFFRDGQDMSVGTSWNILRPETVESLFYLWR----LTGNKTYKEWG 463 (570)
Q Consensus 392 ~~~~l~lA~~L~~tC~~~y~~t~--tGl~PE~--~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR----~TgD~~Yre~g 463 (570)
..+|.+.|+.|...|.+--...+ .-|.|+. +.|.++ -...++.|.+ | .+|-+|. .++|+.|++.+
T Consensus 151 ~~~Y~~~A~~il~~i~~~~~~~~~~~~l~p~~~~~~f~~~--~~~~npSY~~-p----a~~~~fa~~~~~~~~~~W~~~~ 223 (396)
T 1wu4_A 151 PFNYSEQARKLLHTCVHNGEGGPGHPMWNRDNKLIKFIPE--VEFSDPSYHL-P----HFYELFSLWANEEDRVFWKEAA 223 (396)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSSCCCSBCTTTCCBCSSTT--CSEECGGGCC-H----HHHHHHHHHSCGGGHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhhccCCCcceecCCCceeeecCC--CCeeChhhcc-H----HHHHHHHHhcccccChhHHHHH
Confidence 45799999999999986543322 1234554 355443 2567788877 6 4455544 67889999999
Q ss_pred HHHHHHHHHhcccCcCccc
Q 008300 464 WNIFQAFEKNSRIESGYVG 482 (570)
Q Consensus 464 W~if~ai~~~~r~~~Gya~ 482 (570)
-...+-|.+.|..+.|+..
T Consensus 224 ~~~~~lL~~~~~~~tGL~P 242 (396)
T 1wu4_A 224 EASREYLKIACHPETGLAP 242 (396)
T ss_dssp HHHHHHHHHHSCTTTCCCC
T ss_pred HHHHHHHHhcccCCCCCCC
Confidence 9999999998887778553
No 54
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=26.85 E-value=85 Score=32.68 Aligned_cols=91 Identities=7% Similarity=-0.015 Sum_probs=59.4
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCC----ccceeEeecCCCccccccCCCCCchhHHHHHHhHHhhc
Q 008300 379 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTK----LAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLT 454 (570)
Q Consensus 379 mlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tG----l~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~T 454 (570)
-|.++++..+ ..+|.+.|+.|...|.+--.....| |.|....|..+.. ...++.|.. |.+.|-.-- .
T Consensus 103 ALl~A~~~Wg---~~~Y~~~A~~il~~I~~~~v~~~~g~~~~LlpG~~gF~~~~~-~~~nPSY~~-p~~~~~fa~----~ 173 (355)
T 3qxf_A 103 SLLEAGRLWK---EQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNS-WRFNPSYLP-PTLAQYFTR----F 173 (355)
T ss_dssp HHHHHHHHTT---CHHHHHHHHHHHHHHHHHHEEEETTTEEEECSSSSSSEETTE-EEECTTSSC-HHHHHHHGG----G
T ss_pred HHHHHHHHhC---CHHHHHHHHHHHHHHHHhccccCCCCceeecCcccCccCCCC-Ceechhhcc-HHHHHHHHH----h
Confidence 3555665554 4589999999999887643222224 2566555654432 457888855 755553322 2
Q ss_pred CCchHHHHHHHHHHHHHHhcccCcCcc
Q 008300 455 GNKTYKEWGWNIFQAFEKNSRIESGYV 481 (570)
Q Consensus 455 gD~~Yre~gW~if~ai~~~~r~~~Gya 481 (570)
|+.|++.+-...+-|.+.| +.|+.
T Consensus 174 -~~~W~~l~~~~~~lL~~~~--~tGL~ 197 (355)
T 3qxf_A 174 -GAPWTTLRETNQRLLLETA--PKGFS 197 (355)
T ss_dssp -CTTHHHHHHHHHHHHHHTC--TTSCC
T ss_pred -CChHHHHHHHHHHHHHHhh--hcCCC
Confidence 8899999999999999876 55643
No 55
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=23.95 E-value=1.3e+02 Score=31.04 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=57.2
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhhcCCCC--ccceeEeecCCCccccccCCCCCchhHHHHHHhHHhhcCC
Q 008300 379 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTK--LAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGN 456 (570)
Q Consensus 379 mlaLG~~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tG--l~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TgD 456 (570)
-|.++++..+.....+|.+.|+.|...|.+.-.. +.. |.|... |.. ....+..|.+ |.+.+ .+.+.|+|
T Consensus 128 ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~~~~~-~~~~~l~pg~~-~~~---~~~~npSY~~-p~~~~---~fa~~~~~ 198 (363)
T 1kwf_A 128 ALIFADKLWGSSGAINYGQEARTLINNLYNHCVE-HGSYVLKPGDR-WGG---SSVTNPSYFA-PAWYK---VYAQYTGD 198 (363)
T ss_dssp HHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHBC-TTTCCBCSBSS-SCB---TTBBCGGGCC-HHHHH---HHHHHHCC
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHHHHHhcc-CCCeEEecccc-CCC---CCEecchhcC-HHHHH---HHHHccCC
Confidence 3445555433222237999999999888764322 211 233221 211 1345677777 77766 34677899
Q ss_pred chHHHHHHHHHHHHHHhcc--cCcC
Q 008300 457 KTYKEWGWNIFQAFEKNSR--IESG 479 (570)
Q Consensus 457 ~~Yre~gW~if~ai~~~~r--~~~G 479 (570)
+.|++.+-...+-+.+.|+ .+.|
T Consensus 199 ~~W~~~~~~~~~~l~~~~~~~~~tG 223 (363)
T 1kwf_A 199 TRWNQVADKCYQIVEEVKKYNNGTG 223 (363)
T ss_dssp THHHHHHHHHHHHHHHHTTTSTTSC
T ss_pred chHHHHHHHHHHHHHHHhhhcCCCC
Confidence 9999999999999988883 3446
Done!