BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008301
(570 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/538 (67%), Positives = 435/538 (80%), Gaps = 9/538 (1%)
Query: 28 NANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLV 87
NA G V P+ +GVINP+ VP P L P F LNP+VL +M+ RS+SL+
Sbjct: 69 NAPVGFV-PRPVGVINPSFGP-----VPPFDPASL-PQPGFVLNPAVLVRMEHRRSISLL 121
Query: 88 QLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSY 147
Q M+NEGL+PS EEE KR+NVI+KLKEIVL WVKRVAWQR+ PK+QIA T ATILTYGSY
Sbjct: 122 QFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTSATILTYGSY 181
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFD 207
GLGVHG ESDIDALC+GP FA+MA+DFF+VL NML+SRPEVSEIHCVKDAKVPLMRFKFD
Sbjct: 182 GLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFD 241
Query: 208 GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQP 267
GI +DLPYA L +L VPEN++VLNP+FLR++DETSWKSLSGVRAN+CILQLVP++E FQ
Sbjct: 242 GISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQS 301
Query: 268 VLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWP 327
+LRCIKLWAKRRGVYGNL G+ GGVHLAIL A VCQ +P +LN L+++FFKT++ WPWP
Sbjct: 302 ILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWP 361
Query: 328 TPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRD 387
TPV L+D LP G ETR+LMPI+LPCSP+ YCHSNIT+STFY+I TE GH TRD
Sbjct: 362 TPVALEDGRLPTGGT-RETRALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRD 420
Query: 388 LMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG 447
L+R DFDW+ +FEPF YSKKY+RF+++YLS+SNQD+LGDWVGWVKSRFR L+ K+EEVQG
Sbjct: 421 LLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEEVQG 480
Query: 448 LCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHN-GFQGSPGRMGL 506
LCDPNPTE+ID D EP++VF+WG+QPGR N DI VE DF++NI+N G+QG PG+M L
Sbjct: 481 LCDPNPTEFIDPDAGEPNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNL 540
Query: 507 LVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGYVDAKADSK 564
V+ SQL + LD GS RTKACW+ +Y+ PR+PV+SQHLP Y +GY D+K
Sbjct: 541 SVIPTSQLPGYAXLDTGSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVGYAATDKDAK 598
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/538 (67%), Positives = 435/538 (80%), Gaps = 9/538 (1%)
Query: 28 NANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLV 87
NA G V P+ +GVINP+ VP P L P F LNP+VL +M+ RS+SL+
Sbjct: 28 NAPVGFV-PRPVGVINPSFGP-----VPPFDPASL-PQPGFVLNPAVLVRMEHRRSISLL 80
Query: 88 QLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSY 147
Q M+NEGL+PS EEE KR+NVI+KLKEIVL WVKRVAWQR+ PK+QIA T ATILTYGSY
Sbjct: 81 QFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTSATILTYGSY 140
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFD 207
GLGVHG ESDIDALC+GP FA+MA+DFF+VL NML+SRPEVSEIHCVKDAKVPLMRFKFD
Sbjct: 141 GLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFD 200
Query: 208 GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQP 267
GI +DLPYA L +L VPEN++VLNP+FLR++DETSWKSLSGVRAN+CILQLVP++E FQ
Sbjct: 201 GISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQS 260
Query: 268 VLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWP 327
+LRCIKLWAKRRGVYGNL G+ GGVHLAIL A VCQ +P +LN L+++FFKT++ WPWP
Sbjct: 261 ILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWP 320
Query: 328 TPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRD 387
TPV L+D LP G ETR+LMPI+LPCSP+ YCHSNIT+STFY+I TE GH TRD
Sbjct: 321 TPVALEDGRLPTGGT-RETRALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRD 379
Query: 388 LMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG 447
L+R DFDW+ +FEPF YSKKY+RF+++YLS+SNQD+LGDWVGWVKSRFR L+ K+EEVQG
Sbjct: 380 LLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEEVQG 439
Query: 448 LCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHN-GFQGSPGRMGL 506
LCDPNPTE+ID D P++VF+WG+QPGR N DI VE DF++NI+N G+QG PG+M L
Sbjct: 440 LCDPNPTEFIDPDAGGPNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNL 499
Query: 507 LVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGYVDAKADSK 564
V+ SQL +QLD GS RTKACW+ +Y+ PR+PV+SQHLP Y +GY D+K
Sbjct: 500 SVIPTSQLPGYAQLDTGSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVGYAATDKDAK 557
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/493 (68%), Positives = 416/493 (84%), Gaps = 1/493 (0%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
M+EERSLSL++ M NEGLVPS EE+KR+NVI LK+IV+AW K+VAWQRRLP+ QIA T
Sbjct: 1 MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIAST 60
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ATILTYGSYGLGV+G ESDIDA+C+GP FAT+AEDFF+VL NMLK+RPEVS IHCVKDA
Sbjct: 61 NATILTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDA 120
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
KVPLMRFKFDGI IDLPYA L VL+VP+NVD+LNPFFL ++DETSWKSLSGVRAN+ ILQ
Sbjct: 121 KVPLMRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQ 180
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
VP+LE FQ +LRCIKLWA+RRGV GNL+GFLGGVHLAIL A VCQ +P S++ L++NF
Sbjct: 181 FVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNF 240
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
F TYA WPWPTPVMLQD M A ETRS MPIRLPCSPHEYCHSNIT+ST+Y+IRTE
Sbjct: 241 FATYATWPWPTPVMLQDGMSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIRTE 300
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
FLRGH+ T+DL++PDFDW+ +FEPFPYSKKY RFV++YLSA +QD++GDWVGWVKSRFR+
Sbjct: 301 FLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFRA 360
Query: 438 LILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNGF 497
L+LKLE +QG CDP+P EY D DV+EP++VFYWGL P R+N +D+ +VE+DFL+NI++G+
Sbjct: 361 LLLKLEGLQGQCDPSPVEYADRDVSEPNVVFYWGLNPSRSNYIDLESVEEDFLRNIYSGY 420
Query: 498 QGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGYV 557
G+ ++ L +V+A++L K++Q + G+G++ KA WK +D R P YSQHLP Y +GY+
Sbjct: 421 HGTRRKLELSIVKAAELPKNAQFNSGNGKKMKAYWKVVDKE-QRTPAYSQHLPGYFVGYL 479
Query: 558 DAKADSKYPSAGG 570
D++ PS GG
Sbjct: 480 ATNGDTECPSCGG 492
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/483 (66%), Positives = 389/483 (80%), Gaps = 2/483 (0%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGL 149
M NEGL PS EE++KR+ +++KLK IV+AW K+VAWQR LPK+QIA T ATILTYGSYGL
Sbjct: 1 MVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAATSATILTYGSYGL 60
Query: 150 GVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGI 209
G H ESDIDALC+GP FAT+AEDFF+VLHN+LKSRPE+SEIHCVKD+KVPLMRF FDGI
Sbjct: 61 GFHDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGI 120
Query: 210 LIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVL 269
+DLPYA L VL+VPENVD+LN L ++DETSWKSLSGVRAN+ IL LVP+L FQ +L
Sbjct: 121 SVDLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSML 180
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP 329
RC+KLWAKRRGVYGNL+GFLGGVHLA+L A VCQN P S+ L++NFF TYA WPWPTP
Sbjct: 181 RCLKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTP 240
Query: 330 VMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL- 388
VMLQD M ETR MPIRLPCSP+EYCHSN+T+STF KIR EFLRGH+ TRDL
Sbjct: 241 VMLQDGMSSNVEDVIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDLL 300
Query: 389 -MRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG 447
++ D D +FEPFPYS Y RFV++YLSA +QD+LGDWVGWVKS FR L+LKLE VQG
Sbjct: 301 KLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLEAVQG 360
Query: 448 LCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQGSPGRMGLL 507
CDPNP EY+D+D +EP++VFYWGL R N + I VE+DF ++I+ G+ G G+M L
Sbjct: 361 FCDPNPMEYVDMDASEPNVVFYWGLNRSRCNFVYIEPVEEDFSRSIYCGYYGIRGKMELS 420
Query: 508 VVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGYVDAKADSKYPS 567
+VQAS+L K+++ D G+G++ KACWK LDYN R P YSQHLP+Y +GYV++ D++YPS
Sbjct: 421 IVQASELPKNARFDSGNGKKMKACWKMLDYNQRRTPAYSQHLPSYFVGYVESNGDTEYPS 480
Query: 568 AGG 570
GG
Sbjct: 481 TGG 483
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/494 (62%), Positives = 387/494 (78%), Gaps = 14/494 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D+E S+SL QLM NEGL+PS E+E KRR VI +L++IV+ WVK VAWQ RLP+ QI T+
Sbjct: 14 DDESSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATN 73
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
ATIL YGSYGLGV+GSESDIDALC+GP FA++AEDFF+ L +MLKSR EVSE+HCVKDAK
Sbjct: 74 ATILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAK 133
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VPL+RFKFDGIL+DLPYA L VLS+P NVDVLNPFFLRD+DETSWK LSGVRANKCILQL
Sbjct: 134 VPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQL 193
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP LE FQ +LRC+KLWAKRRGVYGNL+GFLGGVH+AIL A VC P +L++L+ANFF
Sbjct: 194 VPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFF 253
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
T+A+W WPTPV+L + P+ G P LMPI+LPC H+YC+S ITRSTFYKI EF
Sbjct: 254 YTFAHWQWPTPVVLLEDTYPSTGAPP---GLMPIQLPCGSHQYCNSTITRSTFYKIVAEF 310
Query: 379 LRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
L GHN T+D ++ +F W LFE +PY+ Y F +++LSA+NQ+DL DWVGWVKSRFR L
Sbjct: 311 LLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCL 370
Query: 439 ILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG-F 497
++K+EEV G+CDPNPTEY++ +P+IVFYWGLQ N+ DI +V+ DFLKN+++G F
Sbjct: 371 LIKIEEVYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSF 430
Query: 498 QGSPGRMGLLVVQASQLSKSSQLDFGSGRR----TKACWK-NLDYNLPRIPVYSQHLPNY 552
+G+ GR+ L +V+ASQL K+ + GS R TK CW+ D +PVYS+HLP Y
Sbjct: 431 RGTVGRIQLTLVKASQLPKNGEC--GSNNRSKKVTKTCWRIREDKQCNNVPVYSKHLPGY 488
Query: 553 IIGY---VDAKADS 563
++GY V+ +AD
Sbjct: 489 VVGYQKMVNREADG 502
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/483 (63%), Positives = 380/483 (78%), Gaps = 7/483 (1%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
M++ S+SL QLM NEGL+PS E+++KRR VI KL++IV+ WVK VAWQ RLP+ QI T
Sbjct: 15 MEDGSSISLRQLMVNEGLIPSLEDQEKRRVVINKLRKIVVRWVKNVAWQHRLPQNQIDAT 74
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ATIL YGSYGLGV+GSESDIDALC+GP FA+++EDFF+ L +MLKSR EVSE+HCVKDA
Sbjct: 75 NATILPYGSYGLGVYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDA 134
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
KVPL+RFKFDGIL+DLPYA L VLS+P NVDVLNPFFLRD+DETSWKSLSGVRANKCILQ
Sbjct: 135 KVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQ 194
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP LE FQ +LRC+KLWAKRRGVYGNL+GFLGGVH+AIL A VC +L++L+ANF
Sbjct: 195 LVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANF 254
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
F +A+W WPTPV+L + PA G P LMPI+LPC H+YC+SNITRSTFYKI E
Sbjct: 255 FYIFAHWQWPTPVVLLEDTYPATGAPP---GLMPIQLPCGSHQYCNSNITRSTFYKIMAE 311
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
FLRGHN T+D ++P+F W LFE +PY Y F +++LSA+NQ+DL DWVGWVKSRFR
Sbjct: 312 FLRGHNLTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRC 371
Query: 438 LILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG- 496
L+ K+EEV G+CDPNPTEY++ +P+IVFYWGLQ N+ DI +VE +FLKN+++G
Sbjct: 372 LLSKIEEVYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVETEFLKNLNSGS 431
Query: 497 FQGSPGRMGLLVVQASQLSKSSQL--DFGSGRRTKACWK-NLDYNLPRIPVYSQHLPNYI 553
FQG GR+ L VV+ SQL K+ + + S + TK CW+ + +PVYS HLP Y+
Sbjct: 432 FQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRIRENKQCNNVPVYSHHLPGYV 491
Query: 554 IGY 556
+GY
Sbjct: 492 VGY 494
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 305/483 (63%), Positives = 378/483 (78%), Gaps = 14/483 (2%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGL 149
M NEGL+PS E+E KRR VI +L++IV+ WVK VAWQ RLP+ QI T+ATIL YGSYGL
Sbjct: 1 MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGL 60
Query: 150 GVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGI 209
GV+GSESDIDALC+GP FA++AEDFF+ L +MLKSR EVSE+HCVKDAKVPL+RFKFDGI
Sbjct: 61 GVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGI 120
Query: 210 LIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVL 269
L+DLPYA L VLS+P NVDVLNPFFLRD+DETSWKSLSGVRANKCILQLVP LE FQ +L
Sbjct: 121 LVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLL 180
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP 329
RC+KLWAKRRGVYGNL+GFLGGVH+AIL A VC P +L++L+ANFF T+A W WPTP
Sbjct: 181 RCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTP 240
Query: 330 VMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
V+L + P+ G P LMPI+LPC H+YC+S ITRSTFYKI EFL GHN T+D +
Sbjct: 241 VVLLEDTYPSTGAPP---GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYL 297
Query: 390 RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
+ +F W LFE +PY+ Y F +++LSA+NQ+DL DWVGWVKSRFR L++K+EEV G+C
Sbjct: 298 KLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEEVYGIC 357
Query: 450 DPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG-FQGSPGRMGLLV 508
DPNPTEY++ +P+IVFYWGLQ N+ DI +V+ DFLKN+++G F+G+ GR+ L +
Sbjct: 358 DPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVGRIQLTL 417
Query: 509 VQASQLSKSSQLDFGSGRR----TKACWK-NLDYNLPRIPVYSQHLPNYIIGY---VDAK 560
V+ASQL K+ + GS R TK CW+ D +PVYS+HLP Y++GY V+ +
Sbjct: 418 VKASQLPKNGEC--GSNNRSKKVTKTCWRIREDKQCNNVPVYSKHLPGYVVGYQKMVNRE 475
Query: 561 ADS 563
AD
Sbjct: 476 ADG 478
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 303/483 (62%), Positives = 377/483 (78%), Gaps = 15/483 (3%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGL 149
M NEGL+PS E+E KRR VI +L++IV+ WVK VAWQ RLP+ QI T+ATIL YGSYGL
Sbjct: 1 MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGL 60
Query: 150 GVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGI 209
GV+GSESDIDALC+GP FA++A DFF+ L +MLKSR EVSE+HCVKDAKVPL+RFKFDGI
Sbjct: 61 GVYGSESDIDALCIGPFFASIA-DFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGI 119
Query: 210 LIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVL 269
L+DLPYA L VLS+P NVDVLNPFFLRD+DETSWK LSGVRANKCILQLVP LE FQ +L
Sbjct: 120 LVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLL 179
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP 329
RC+KLWAKRRGVYGNL+GFLGGVH+AIL A VC P +L++L+ANFF T+A+W WPTP
Sbjct: 180 RCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTP 239
Query: 330 VMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
V+L + P+ G P LMPI+LPC H+YC+S ITRSTFYKI EFL GHN T+D +
Sbjct: 240 VVLLEDTYPSTGAPP---GLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYL 296
Query: 390 RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
+ +F W LFE +PY+ Y F +++LSA+NQ+DL DWVGWVKSRFR L++K+EEV G+C
Sbjct: 297 KLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEEVYGIC 356
Query: 450 DPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG-FQGSPGRMGLLV 508
DPNPTEY++ +P+IVFYWGLQ N+ DI +V+ DFLKN+++G F+G+ GR+ L +
Sbjct: 357 DPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVGRIQLTL 416
Query: 509 VQASQLSKSSQLDFGSGRR----TKACWK-NLDYNLPRIPVYSQHLPNYIIGY---VDAK 560
V+ASQL K+ + GS R TK CW+ D +PVYS+HLP Y++GY V+ +
Sbjct: 417 VKASQLPKNGEC--GSNNRSKKVTKTCWRIREDKQCNNVPVYSKHLPGYVVGYQKMVNRE 474
Query: 561 ADS 563
AD
Sbjct: 475 ADG 477
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/551 (43%), Positives = 338/551 (61%), Gaps = 18/551 (3%)
Query: 26 PQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLS 85
PQ A T S+ P++ P + P+ VP + +D R+ +
Sbjct: 3 PQIAVMPPATLVSVPNARPHIGISGSTAPPVSGPLMTVPPIPGHVFLDSPTDIDIARTHA 62
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + + L+ + +EE KRR+V+ +L++IV W +RV WQR LPK+ ++A I T+G
Sbjct: 63 LEKFQIDAELILTEKEEAKRRSVLAQLEQIVKRWARRVTWQRGLPKDLKESSNAKIFTFG 122
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG E+DIDALC+GP +AT+ +DFF+VL+NMLK EVSE+ CVK A VPLMRFK
Sbjct: 123 SYQLGVHGPEADIDALCVGPCYATLEDDFFIVLYNMLKKTAEVSEVQCVKSANVPLMRFK 182
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F GI IDL YA L + ++PE++D+L+ L +LD+T+ KSL+G R ILQLVP +E F
Sbjct: 183 FSGISIDLLYARLSLRTIPEDMDILDEKLLENLDDTTVKSLNGCRVTARILQLVPKIENF 242
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LRCIK WAKRRG+Y ++ GFLGG+H A+LVA VCQ P +++ LV+ FF YA+W
Sbjct: 243 RSTLRCIKFWAKRRGIYSHIFGFLGGIHWAVLVARVCQMFPNATVSMLVSRFFWIYAHWQ 302
Query: 326 WPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
WPTPV L + P S+ MPI +P P+ C N+TRST K+++EF RG +
Sbjct: 303 WPTPVTLVETQ-PDHADGSDRHHHMPIIIPVHPYSCCSYNVTRSTLQKLKSEFSRGWDAI 361
Query: 386 RDL------MRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
+ + DW+ LFE FP+ Y F+++Y++AS++DD W GWV+SRFR L+
Sbjct: 362 MKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIYVTASDEDDFRSWRGWVESRFRHLL 421
Query: 440 LKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQG 499
LK E++ CDPNP Y D +V EPH F WGL+ + +D+ +E +F + NG++G
Sbjct: 422 LKFEKLPAYCDPNPYPYFDKNVKEPHCYFLWGLKLRKNISVDMADLEDEFRLYLSNGYEG 481
Query: 500 SPG-RMGLLVVQASQL-----SKSSQLDFGSGRRTKACWKNLDYN-LPRIPVYSQHLPNY 552
PG + L ++ QL SKSS+L + +K W N YN RIP YSQ+ P Y
Sbjct: 482 RPGCDVHLTLLNRFQLPSFANSKSSELR----QHSKPYWTNESYNYYRRIPRYSQYYPLY 537
Query: 553 IIGYVDAKADS 563
++GY+ ++
Sbjct: 538 VVGYIAVDKEA 548
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/439 (49%), Positives = 298/439 (67%), Gaps = 15/439 (3%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
+PS+L ++D RS SLVQ + +EG V S E+E+KR VI++LK+IV+ W VA+++ +P
Sbjct: 70 HPSLLAEVDHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVP 129
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ AT+LTYGSY LG HG ESDID LCLGP AT+ FFVVL +L+ RPEVSE
Sbjct: 130 Q---GLATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSE 186
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+H V+ AKVPLMRF+F GI +DL YA L V+ + ++ +P L+ +D SW+SLSGVR
Sbjct: 187 VHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVR 246
Query: 251 ANKCILQLVPD---------LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
N+ I+QLVP+ ++KFQ +LRCIKLWA++RG++ + GF G+HLAIL A+V
Sbjct: 247 VNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYV 306
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEY 361
C+ P S++ L A FF+T+A+WPW PV L D + SE R LMPI +PC+P E+
Sbjct: 307 CRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDEL--TTCLHSEGR-LMPIVMPCTPPEF 363
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ 421
C S +T+ + KIR E RG+ TRD +R DF W +LFEPFPY +KY +F+R+ L A
Sbjct: 364 CASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTI 423
Query: 422 DDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLD 481
+LGDW GWVKSRFR LILKLE CDP P+E +D +P++VFYWGL P R +D
Sbjct: 424 AELGDWAGWVKSRFRFLILKLERAGIECDPCPSEEVDHTDNDPNVVFYWGLIPKRIIQVD 483
Query: 482 IVAVEKDFLKNIHNGFQGS 500
+++ DF++++ N G+
Sbjct: 484 TSSLKGDFMEDLTNDVYGT 502
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/496 (46%), Positives = 310/496 (62%), Gaps = 39/496 (7%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P+ L + D RS SLVQ + NEG VP+ EE+ R VI+KLKEIV+ W K VA+++R+P
Sbjct: 82 PAFLFEADFRRSHSLVQFLENEGAVPTVEEDKTREQVIRKLKEIVMDWAKVVAYEQRVPP 141
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEI 191
++ AT+LTYGSY LG HG ESDIDALC+GP AT+ FFV L +L+ R EVS +
Sbjct: 142 RRVT---ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHHFFVALRQILERRLEVSGM 198
Query: 192 HCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
V++AKVPLMRF F GI +DL YA L V+ E ++ +P FLR LD SW+SLSGVR
Sbjct: 199 QTVENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWRSLSGVRV 258
Query: 252 NKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLN 311
N+ I+QLVP+ +KFQ +LR IKLWA+RRG++ +L GF G+HLAIL A++CQ +P + N
Sbjct: 259 NEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQRYPNATAN 318
Query: 312 TLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS----LMPIRLPCSPHEYCHSNIT 367
L FF+ +A+W W PV L G P+ + MPI +PC+P E C SN+T
Sbjct: 319 GLFTMFFEIFAHWDWQIPVNLH-------GQPTNCKRSDGYYMPIVMPCTPPELCMSNMT 371
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
+ TF KIR E +RG+ T+DL R DF+W +LF PFPY+ +Y +F+R+ L + ++L DW
Sbjct: 372 KCTFKKIREELMRGYALTKDLWRHDFEWTWLFAPFPYATRYQQFLRIALCSPTSEELRDW 431
Query: 428 VGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEK 487
GWVKSRFR LILKLE CDP +E +D V +P+I+++WGL LDI ++ +
Sbjct: 432 TGWVKSRFRQLILKLERNGLECDPYSSEEVDHRVIKPNIMYHWGLISEANTYLDISSLRE 491
Query: 488 DFLKNIHNGFQGS----PGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIP 543
DF+K+I N G + L VV +SQL KS D
Sbjct: 492 DFMKDIINDVYGKVKCRRSELTLSVVGSSQLPKSMYSD---------------------S 530
Query: 544 VYSQHLPNYIIGYVDA 559
Y ++P Y++GY A
Sbjct: 531 AYLGYMPQYMVGYQPA 546
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/509 (45%), Positives = 320/509 (62%), Gaps = 52/509 (10%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ L QMD R+ SL+Q +EG +PS E + KR VI+KL +IV+ W K VA+++R+
Sbjct: 8 LHPAFLAQMDSRRTTSLLQ---DEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRV 64
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
P + AT+LTYGSY LG HG ESDIDALC+GP AT+ FF+VL +L+ RPEVS
Sbjct: 65 PPRRAT---ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVS 121
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
E+ V+ AKVPLMRF+F GI +D YA L + NP L+ LD SW+SLSGV
Sbjct: 122 ELQTVESAKVPLMRFRFSGISVDFTYAQLPAIITS------NPHLLQKLDSLSWRSLSGV 175
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QLVP+ +KFQ +LRCIKLWAKRRG++ +L GF G+HLAIL A+VCQ +P G+
Sbjct: 176 RVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGT 235
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR----SLMPIRLPCSPHEYCHSN 365
+N L FF +A+W W PV L G P+ R S MPI LPC+P E+C SN
Sbjct: 236 INGLFTIFFDIFAHWNWQIPVSLH-------GQPTNCRRPDGSFMPILLPCTPPEFCTSN 288
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
+T+ TF KIR E +RG+ T++ R DF+W +LF PFPY+ KY F+R+ L A ++L
Sbjct: 289 MTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELR 348
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
DW GWVKSRF +LILKLE + CDP+ TE +D V EP IV +WGL + +DI ++
Sbjct: 349 DWAGWVKSRF-NLILKLESIGVECDPDSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSL 407
Query: 486 EKDFLKNIHNG----FQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPR 541
+DF+K++ N +G+ ++ + +V++SQL KS L
Sbjct: 408 GEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPKS---------------------LYS 446
Query: 542 IPVYSQHLPNYIIGYVDAKADSKYPSAGG 570
VY+ ++P Y++GY + + Y A G
Sbjct: 447 HSVYTPYIPQYMLGY---QTPTDYSGAAG 472
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 297/430 (69%), Gaps = 6/430 (1%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ ++ D RS SL+ ++ G++PS EEE KR+ V+++L +IV+ W KRVA+ +R
Sbjct: 69 LDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQR- 127
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
EQ T AT+LT+GSY LG +G ESDIDA+C+GP A++ FF+VL ML+ RPEVS
Sbjct: 128 --EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVS 185
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
++H +++AKVPLMRFKF+G+L+D PY L V++ E + +P L ++E SW+ LSGV
Sbjct: 186 DLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGV 245
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QL+P+++KFQ +LRC+KLWA++RG++ +L GF G+HLAIL A VC HP +
Sbjct: 246 RVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHAT 305
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
L++L +FF +++W WP PV L D P + S MPI +PCSP E+C S+ITRS
Sbjct: 306 LSSLFNSFFDIFSHWHWPLPVSLLDQPTP---WRPHCCSFMPIVMPCSPPEFCASSITRS 362
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
TF KI+ E RG T+ D +W LF PFPY+ +Y F+R+ LSA ++L DWVG
Sbjct: 363 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 422
Query: 430 WVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDF 489
WVKSRFR+L+LKLE + CDP+P+E D + EP++VF+WGL + + I +V++DF
Sbjct: 423 WVKSRFRNLLLKLESIGVDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNICIDSVKEDF 482
Query: 490 LKNIHNGFQG 499
+K++ N G
Sbjct: 483 MKSVTNDIYG 492
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/487 (45%), Positives = 325/487 (66%), Gaps = 30/487 (6%)
Query: 74 VLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQ 133
V+ MDE RS SL++ +++ G+VPS E+E +R V+++L +IV+ W KRVA+++
Sbjct: 64 VIIYMDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMDWAKRVAYEQG-NWHW 122
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
IA AT+LT+GSY LG +G ESDID LC+GP A++ FFVVL ML+ RPEVSE+H
Sbjct: 123 IAS--ATVLTFGSYALGAYGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGRPEVSELHS 180
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
++ AKVPLMRFKF+GIL+D PY L V++ E + +P L ++D SW+ LSGVRAN+
Sbjct: 181 IEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANR 240
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
I+QLVP+++KFQ +LRC+KLWA++RG++ +L GF G+HLAIL A+VC+ HP S+NTL
Sbjct: 241 QIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTL 300
Query: 314 VANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
++ FF + +WPWP PV L DP +P G + SLMPI LPC P E+C S+ T STF K
Sbjct: 301 LSLFFDIFVHWPWPLPVSLLDPPVPCRG--PDGCSLMPIMLPCIPPEFCSSSTTESTFSK 358
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
I+ E RG+ ++D DF+W +LF PFPY +Y F+R+ LSA ++L DWVGWVKS
Sbjct: 359 IKEELWRGYALSKDTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRDWVGWVKS 418
Query: 434 RFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNI 493
RFR+L+LKLE + CDP+P+E +D +T+P++VF+WGL R + I ++++DF+K++
Sbjct: 419 RFRNLLLKLESLGVYCDPDPSEQVDHTITDPNVVFFWGLIYRRNIQICISSLKEDFMKSV 478
Query: 494 HNGFQG----SPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHL 549
N G + + + +V QL KS + + VYS+ L
Sbjct: 479 CNNIYGKEKCAHSDITMSIVGPPQLPKS---------------------VFDLSVYSEKL 517
Query: 550 PNYIIGY 556
P +++G+
Sbjct: 518 PQHMMGH 524
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/481 (47%), Positives = 307/481 (63%), Gaps = 29/481 (6%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P +MD R+ SL+Q +T+EG +P+ EEE+ R VI++LK+IV W K VA + R+P
Sbjct: 67 PEFFFEMDYRRTHSLIQFLTDEGAIPTPEEEETRELVIRELKKIVTDWAKGVASEERVPP 126
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEI 191
++ AT+LTYGSY LG HG ESDIDALC+GP A + FFVVL +LK RPEVS +
Sbjct: 127 RRVT---ATVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFVVLRQILKCRPEVSGL 183
Query: 192 HCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
V++AKVPLMRF+F GI +DL YA L VL + ++ +P +LR LD SWKSLSGVR
Sbjct: 184 QTVENAKVPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRRLDSRSWKSLSGVRV 243
Query: 252 NKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLN 311
N+ I+QLVP+ EKFQ +LRCIKLWA+RRG++ +L G G+HLAIL A+VCQ P + N
Sbjct: 244 NEQIVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHLAILAAYVCQRFPNATAN 303
Query: 312 TLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR----SLMPIRLPCSPHEYCHSNIT 367
L FF +A+WPW PV L G P+ R LMPI +PC+P E C SN+T
Sbjct: 304 GLFTMFFGIFAHWPWHIPVDLH-------GQPTNCRHSDGCLMPIVMPCTPPELCASNMT 356
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
TF KIR E +RG+ T+DL DF+W ++FEPFPYS Y +F+R+ L A ++L DW
Sbjct: 357 EGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPFPYSTTYGQFLRIALCAPTSEELHDW 416
Query: 428 VGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEK 487
+GWVKSRF LILKLE + CDPN ++ +D V +P+ V++WGL P LD ++++
Sbjct: 417 IGWVKSRFPYLILKLENIGIECDPNSSQEVDHTVIKPNTVYHWGLIPLSDVYLDPSSLKE 476
Query: 488 DFLKNIHNGFQG----SPGRMGLLVVQASQLSKSSQLD----------FGSGRRTKA-CW 532
DF+K I N G + + + +V AS+L KS D +G G + A CW
Sbjct: 477 DFMKYIINDVYGKVKCTDSELTISIVDASELPKSMSNDSFYSQQHLHEYGVGYQAAADCW 536
Query: 533 K 533
Sbjct: 537 S 537
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/426 (49%), Positives = 301/426 (70%), Gaps = 5/426 (1%)
Query: 74 VLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQ 133
V+ MDE RS SL++ ++N G+ PS E+E +R V+++L +IV+ W +RVA+++ +Q
Sbjct: 64 VIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGKIVMDWARRVAYEQ---GKQ 120
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
T AT+LT+GSY LG +G ESDID LC+GP A++ FFVVL ML+ RPEVSE+H
Sbjct: 121 HWITSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHS 180
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
++ AKVPLMRFKF+GIL+D PY L V++ E + +P L ++D SW+ LSGVRAN+
Sbjct: 181 IEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANR 240
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
I+QLVP+++KFQ +LRC+KLWA++RG+ +L GF G+HLAIL A+VC+ HP S+NTL
Sbjct: 241 QIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTL 300
Query: 314 VANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
++ FF + +WPWP PV L DP + G + SLMPI LPC P E+C S+ T STF K
Sbjct: 301 LSLFFDIFVHWPWPLPVSLLDPPVLCGG--PDGCSLMPIMLPCIPPEFCSSSTTESTFSK 358
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
I+ E RG+ ++D D DW +LF PFPY +Y F+R+ LSA +D+L DWVGWVKS
Sbjct: 359 IKEELRRGYALSKDTRSTDSDWSWLFAPFPYGARYKCFLRIVLSAPMEDELRDWVGWVKS 418
Query: 434 RFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNI 493
RFR+L+LKLE + CDP+P++ +D +T+P++VF+WGL R+ + ++++DF+K++
Sbjct: 419 RFRNLLLKLESLGVYCDPDPSKQVDHTITDPNVVFFWGLIYRRSIQICTNSLKEDFMKSV 478
Query: 494 HNGFQG 499
N G
Sbjct: 479 CNNIYG 484
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 309/456 (67%), Gaps = 11/456 (2%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ MD RS+SL++ + G+VPS EEE +R V+++L +IV+ W K+VA+ +R
Sbjct: 63 LDPATTVHMDVVRSVSLLKFIAGAGVVPSQEEEQRREEVVRELDKIVMDWAKQVAYDQR- 121
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
++ T T+LT+GSY LG +G ESDIDA+C+GP A++ FFVVL ML+ RPEVS
Sbjct: 122 --DKHWITTGTVLTFGSYALGAYGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPEVS 179
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
++H ++ A+VPLMRFKF+G+ +D PY L V++ E + +P L +D SW+ LSGV
Sbjct: 180 DLHSIESARVPLMRFKFNGVSVDFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLSGV 239
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QLVP++++FQ +LRC+KLWA++RG+Y +L G+ G+HLA+L A+VC+ HP S
Sbjct: 240 RVNRQIMQLVPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPNAS 299
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
+NTL + FF +++WPWP PV L D A + + SLMPI +PC P E+C S+IT+S
Sbjct: 300 VNTLFSMFFDIFSHWPWPLPVALHD---QAPLWGPDGCSLMPIVMPCFPPEFCASSITKS 356
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
TF KI+ E RG T+D+ D DW ++F P+PY+ KY F+ + LSA ++L DWVG
Sbjct: 357 TFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTEELRDWVG 416
Query: 430 WVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDF 489
WVKSRFR+LILKLE + CDP+P+E ++ + P++VF+WGL R+ + +++ DF
Sbjct: 417 WVKSRFRNLILKLESLDVDCDPDPSEKVNHTIAAPNVVFFWGLI-YRSTKISASSLKNDF 475
Query: 490 LKNIHNGFQG----SPGRMGLLVVQASQLSKSSQLD 521
+K++ N G + + + +++ SQL KS D
Sbjct: 476 MKSVINNIYGKEKCARSDITMSIIETSQLPKSISGD 511
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/509 (43%), Positives = 307/509 (60%), Gaps = 69/509 (13%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ L QMD R+ SL+Q + +EG +PS E + KR VI+KL +IV+ W K VA+++R+
Sbjct: 8 LHPAFLAQMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRV 67
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
P + AT+LTYGSY LG HG ESDIDALC+GP AT+ FF+VL +L+ RPEVS
Sbjct: 68 PPRRAT---ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVS 124
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
E+ V+ AK + NP L+ LD SW+SLSGV
Sbjct: 125 ELQTVESAKA---------------------------IITSNPHLLQKLDSRSWRSLSGV 157
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QLVP+ +KFQ +LRCIKLWAKRRG++ +L GF G+HLAIL A+VCQ +P G+
Sbjct: 158 RVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGT 217
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR----SLMPIRLPCSPHEYCHSN 365
+N L FF +A+W W PV L G P+ R S MPI LPC+P E+C SN
Sbjct: 218 INGLFTIFFDIFAHWNWQIPVSLH-------GQPTNCRRPDGSFMPILLPCTPPEFCTSN 270
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
+T+ TF KIR E +RG+ T++ R DF+W +LF PFPY+ KY F+R+ L A ++L
Sbjct: 271 MTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELR 330
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
DW GWVKSRFR+LILKLE + CDP+ TE +D V EP IV +WGL + +DI ++
Sbjct: 331 DWAGWVKSRFRNLILKLESIGVECDPDSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSL 390
Query: 486 EKDFLKNIHNG----FQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPR 541
+DF+K++ N +G+ ++ + +V++SQL KS L
Sbjct: 391 GEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPKS---------------------LYS 429
Query: 542 IPVYSQHLPNYIIGYVDAKADSKYPSAGG 570
VY+ ++P Y++GY + + Y A G
Sbjct: 430 HSVYTPYIPQYMLGY---QTPTDYSGAAG 455
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/509 (43%), Positives = 306/509 (60%), Gaps = 70/509 (13%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ L QMD R+ SL+Q + +EG +PS E + KR VI+KL +IV+ W K VA+++R+
Sbjct: 8 LHPAFLAQMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRV 67
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
P + AT+LTYGSY LG HG ESDIDALC+GP AT+ FF+VL +L+ RPEVS
Sbjct: 68 PPRRAT---ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVS 124
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
E+ V+ AK + NP L+ LD SW+SLSGV
Sbjct: 125 ELQTVESAKA---------------------------IITSNPHLLQKLDSLSWRSLSGV 157
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QLVP+ +KFQ +LRCIKLWAKRRG++ +L GF G+HLAIL A+VCQ +P G+
Sbjct: 158 RVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGT 217
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR----SLMPIRLPCSPHEYCHSN 365
+N L FF +A+W W PV L G P+ R S MPI LPC+P E+C SN
Sbjct: 218 INGLFTIFFDIFAHWNWQIPVSLH-------GQPTNCRRPDGSFMPILLPCTPPEFCTSN 270
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
+T+ TF KIR E +RG+ T++ R DF+W +LF PFPY+ KY F+R+ L A ++L
Sbjct: 271 MTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELR 330
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
DW GWVKSRF +LILKLE + CDP+ TE +D V EP IV +WGL + +DI ++
Sbjct: 331 DWAGWVKSRF-NLILKLESIGVECDPDSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSL 389
Query: 486 EKDFLKNIHNG----FQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPR 541
+DF+K++ N +G+ ++ + +V++SQL KS L
Sbjct: 390 GEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPKS---------------------LYS 428
Query: 542 IPVYSQHLPNYIIGYVDAKADSKYPSAGG 570
VY+ ++P Y++GY + + Y A G
Sbjct: 429 HSVYTPYIPQYMLGY---QTPTDYSGAAG 454
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 263/393 (66%), Gaps = 15/393 (3%)
Query: 117 LAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV 176
+ W VA+++ +P+ AT+LTYGSY LG HG ESDID LCLGP AT+ FFV
Sbjct: 1 MHWANAVAYEQSVPQ---GLATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFV 57
Query: 177 VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR 236
VL +L+ RPEVSE+H V+ AKVPLMRF+F GI +DL YA L V+ + ++ +P L+
Sbjct: 58 VLRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQ 117
Query: 237 DLDETSWKSLSGVRANKCILQLVPD---------LEKFQPVLRCIKLWAKRRGVYGNLHG 287
+D SW+SLSGVR N+ I+QLVP+ ++KFQ +LRCIKLWA++RG++ + G
Sbjct: 118 KIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLG 177
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR 347
F G+HLAIL A+VC+ P S++ L A FF+T+A+WPW PV L D + SE R
Sbjct: 178 FFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDEL--TTCLHSEGR 235
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
LMPI +PC+P E+C S +T+ + KIR E RG+ TRD +R DF W +LFEPFPY +K
Sbjct: 236 -LMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQK 294
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIV 467
Y +F+R+ L A +LGDW GWVKSRFR LILKLE CDP P+E +D +P++V
Sbjct: 295 YQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAGIECDPCPSEEVDHTDNDPNVV 354
Query: 468 FYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQGS 500
FYWGL P R +D +++ DF++++ N G+
Sbjct: 355 FYWGLIPKRIIQVDTSSLKGDFMEDLTNDVYGT 387
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 263/393 (66%), Gaps = 15/393 (3%)
Query: 117 LAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV 176
+ W VA+++ +P+ AT+LTYGSY LG HG ESDID LCLGP AT+ FFV
Sbjct: 1 MHWANAVAYEQSVPQ---GLATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFV 57
Query: 177 VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR 236
VL +L+ RPEVSE+H V+ AKVPLMRF+F GI +DL YA L V+ + ++ +P L+
Sbjct: 58 VLRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQ 117
Query: 237 DLDETSWKSLSGVRANKCILQLVPD---------LEKFQPVLRCIKLWAKRRGVYGNLHG 287
+D SW+SLSGVR N+ I+QLVP+ ++KFQ +LRCIKLWA++RG++ + G
Sbjct: 118 KIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLG 177
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR 347
F G+HLAIL A+VC+ P S++ L A FF+T+A+WPW PV L D + SE R
Sbjct: 178 FFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDEL--TTCLHSEGR 235
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
LMPI +PC+P E+C S +T+ + KIR E RG+ TRD +R DF W +LFEPFPY +K
Sbjct: 236 -LMPIVMPCTPLEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQK 294
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIV 467
Y +F+R+ L A +LGDW GWVKSRFR LILKLE CDP P+E +D +P++V
Sbjct: 295 YQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAGIECDPCPSEEVDHTDNDPNVV 354
Query: 468 FYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQGS 500
FYWGL P R +D +++ DF++++ N G+
Sbjct: 355 FYWGLIPKRIIQVDTSSLKGDFMEDLTNDVYGT 387
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/383 (48%), Positives = 264/383 (68%), Gaps = 6/383 (1%)
Query: 117 LAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV 176
+ W KRVA+ +R EQ T AT+LT+GSY LG +G ESDIDA+C+GP A++ FF+
Sbjct: 1 MGWAKRVAYDQR---EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFI 57
Query: 177 VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR 236
VL ML+ RPEVS++H +++AKVPLMRFKF+G+L+D PY L V++ E + +P L
Sbjct: 58 VLRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLA 117
Query: 237 DLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAI 296
++E SW+ LSGVR N+ I+QL+P+++KFQ +LRC+KLWA++RG++ +L GF G+HLAI
Sbjct: 118 AVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAI 177
Query: 297 LVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPC 356
L A VC HP +L++L +FF +++W WP PV L D P + S MPI +PC
Sbjct: 178 LAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLDQPTP---WRPHCCSFMPIVMPC 234
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
SP E+C S+ITRSTF KI+ E RG T+ D +W LF PFPY+ +Y F+R+ L
Sbjct: 235 SPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVL 294
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGR 476
SA ++L DWVGWVKSRFR+L+LKLE + CDP+P+E D + EP++VF+WGL
Sbjct: 295 SAPVAEELRDWVGWVKSRFRNLLLKLESIGVDCDPDPSEQADHSMIEPNVVFFWGLMYRT 354
Query: 477 TNLLDIVAVEKDFLKNIHNGFQG 499
+ + I +V++DF+K++ N G
Sbjct: 355 STNICIDSVKEDFMKSVTNDIYG 377
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/383 (48%), Positives = 264/383 (68%), Gaps = 6/383 (1%)
Query: 117 LAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV 176
+ W KRVA+ +R EQ T AT+LT+GSY LG +G ESDIDA+C+GP A++ FF+
Sbjct: 1 MGWAKRVAYDQR---EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFI 57
Query: 177 VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR 236
VL ML+ RPEVS++H +++AKVPLMRFKF+G+L+D PY L V++ E + +P L
Sbjct: 58 VLRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLA 117
Query: 237 DLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAI 296
++E SW+ LSGVR N+ I+QL+P+++KFQ +LRC+KLWA++RG++ +L GF G+HLAI
Sbjct: 118 VVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAI 177
Query: 297 LVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPC 356
L A VC HP +L++L +FF +++W WP PV L D P + S MPI +PC
Sbjct: 178 LAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLDQPTP---WRPHCCSFMPIVMPC 234
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
SP E+C S+ITRSTF KI+ E RG T+ D +W LF PFPY+ +Y F+R+ L
Sbjct: 235 SPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVL 294
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGR 476
SA ++L DWVGWVKSRFR+L+LKLE + CDP+P+E D + EP++VF+WGL
Sbjct: 295 SAPVAEELRDWVGWVKSRFRNLLLKLESIGVDCDPDPSEQADHSMIEPNVVFFWGLMYRT 354
Query: 477 TNLLDIVAVEKDFLKNIHNGFQG 499
+ + I +V++DF+K++ N G
Sbjct: 355 STNICIDSVKEDFMKSVTNDIYG 377
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/430 (43%), Positives = 276/430 (64%), Gaps = 33/430 (7%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ ++ D RS SL+ ++ G++PS EEE KR+ V+++L +IV+ W KRVA+ +R
Sbjct: 69 LDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQR- 127
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
EQ T AT+LT+GSY LG +G ESDIDA+C+GP A++ FF+VL ML+ RPEVS
Sbjct: 128 --EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVS 185
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
++H +++AK + +P L ++E SW+ LSGV
Sbjct: 186 DLHSIENAKA---------------------------IHAFDPRLLAAVNEPSWRCLSGV 218
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QL+P+++KFQ +LRC+KLWA++RG++ +L GF G+HLAIL A VC HP +
Sbjct: 219 RVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHAT 278
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
L++L +FF +++W WP PV L D P + S MPI +PCSP E+C S+ITRS
Sbjct: 279 LSSLFNSFFDIFSHWHWPLPVSLLDQPTP---WRPHCCSFMPIVMPCSPPEFCASSITRS 335
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
TF KI+ E RG T+ D +W LF PFPY+ +Y F+R+ LSA ++L DWVG
Sbjct: 336 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 395
Query: 430 WVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDF 489
WVKSRFR+L+LKLE + CDP+P+E D + EP++VF+WGL + + I +V++DF
Sbjct: 396 WVKSRFRNLLLKLESIGVDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNICIDSVKEDF 455
Query: 490 LKNIHNGFQG 499
+K++ N G
Sbjct: 456 MKSVTNDIYG 465
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/430 (45%), Positives = 265/430 (61%), Gaps = 60/430 (13%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
+PS+L ++D RS SLVQ + +EG V S E+E+KR VI++LK+IV+ W VA+++ +P
Sbjct: 70 HPSLLAEVDHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVP 129
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ AT+LTYGSY LG HG ESDID LCLGP AT+ FFVVL +L+ RPEVSE
Sbjct: 130 Q---GLATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSE 186
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+H V+ AKVPLMRF+F GI +DL YA L V+ + ++ +P L+ +D SW+SLSGVR
Sbjct: 187 VHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVR 246
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
N+ I+QLVP+ EKFQ +LRCIKLWA++RG++ + GF G+HLAIL A+VC+ P S+
Sbjct: 247 VNEQIVQLVPNAEKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASV 306
Query: 311 NTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
+ L A FF+T+A+WPW P DP+
Sbjct: 307 SGLFAVFFQTFAHWPWQVP----DPL---------------------------------- 328
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
R DF W +LFEPFPY +KY +F+R+ L A +LGDW GW
Sbjct: 329 -------------------RHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGW 369
Query: 431 VKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFL 490
VKSRFR LILKLE CDP P+E +D +P++VFYWGL P R +D +++ DF+
Sbjct: 370 VKSRFRFLILKLERAGIECDPCPSEEVDHTDNDPNVVFYWGLIPKRIIQVDTSSLKGDFM 429
Query: 491 KNIHNGFQGS 500
+++ N G+
Sbjct: 430 EDLTNDVYGT 439
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/430 (43%), Positives = 276/430 (64%), Gaps = 33/430 (7%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ ++ D RS SL+ ++ G++PS EEE KR+ V+++L +IV+ W KRVA+ +R
Sbjct: 69 LDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQR- 127
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
EQ T AT+LT+GSY LG +G ESDIDA+C+GP A++ FF+VL ML+ RPEVS
Sbjct: 128 --EQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVS 185
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
++H +++AK + +P L ++E SW+ LSGV
Sbjct: 186 DLHSIENAKA---------------------------IHAFDPRLLAVVNEPSWRCLSGV 218
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QL+P+++KFQ +LRC+KLWA++RG++ +L GF G+HLAIL A VC HP +
Sbjct: 219 RVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHAT 278
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
L++L +FF +++W WP PV L D P + S MPI +PCSP E+C S+ITRS
Sbjct: 279 LSSLFNSFFDIFSHWHWPLPVSLFDQPTP---WRPHCCSFMPIVMPCSPPEFCASSITRS 335
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
TF KI+ E RG T+ D +W LF PFPY+ +Y F+R+ LSA ++L DWVG
Sbjct: 336 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 395
Query: 430 WVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDF 489
WVKSRFR+L+LKLE + CDP+P+E D + EP++VF+WGL + + I +V++DF
Sbjct: 396 WVKSRFRNLLLKLESIGVDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNICIDSVKEDF 455
Query: 490 LKNIHNGFQG 499
+K++ N G
Sbjct: 456 MKSVTNDIYG 465
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/434 (44%), Positives = 265/434 (61%), Gaps = 60/434 (13%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ L QMD R+ SL+Q + +EG +PS E + KR VI+KL +IV+ W K VA+++R+
Sbjct: 51 LHPAFLAQMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRV 110
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
P + AT+LTYGSY LG HG ESDIDALC+GP AT+ FF+VL +L+ RPEVS
Sbjct: 111 PPRRAT---ATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVS 167
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
E+ V+ AK + NP L+ LD SW+SLSGV
Sbjct: 168 ELQTVESAKA---------------------------IITSNPHLLQKLDSLSWRSLSGV 200
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R N+ I+QLVP+ +KFQ +LRCIKLWAKRRG++ +L GF G+HLAIL A+VCQ +P G+
Sbjct: 201 RVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGT 260
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR----SLMPIRLPCSPHEYCHSN 365
+N + G P+ R S MPI LPC+P E+C SN
Sbjct: 261 INVSL-------------------------HGQPTNCRRPDGSFMPILLPCTPPEFCTSN 295
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
+T+ TF KIR E +RG+ T++ R DF+W +LF PFPY+ KY F+R+ L A ++L
Sbjct: 296 MTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELR 355
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
DW GWVKSRF +LILKLE + CDP+ TE +D V EP IV +WGL + +DI ++
Sbjct: 356 DWAGWVKSRF-NLILKLESIGVECDPDSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSL 414
Query: 486 EKDFLKNIHNGFQG 499
+DF+K++ N G
Sbjct: 415 GEDFMKDVINDVYG 428
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/461 (40%), Positives = 276/461 (59%), Gaps = 64/461 (13%)
Query: 70 LNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
L+P+ ++ D RS SL+ ++ G++PS EEE KR+ V+++L +IV+ W KRVA+ +R
Sbjct: 69 LDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQR- 127
Query: 130 PKEQIAETHATILTYGSYGLG-----------------------VHGSESDIDALCLGPE 166
EQ T AT+LT+GSY LG +G ESDIDA+C+GP
Sbjct: 128 --EQYWNTTATVLTFGSYALGEFPFEIFNISYCDKRCLKCSALKAYGPESDIDAVCVGPC 185
Query: 167 FATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPEN 226
A++ FF+VL ML+ RPEVS++H +++AK
Sbjct: 186 IASLQHHFFIVLRQMLEERPEVSDLHSIENAKA--------------------------- 218
Query: 227 VDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLH 286
+ +P L ++E SW+ LSGVR N+ I+QL+P+++KFQ +LRC+KLWA++RG++ +L
Sbjct: 219 IHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLL 278
Query: 287 GFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSET 346
GF G+HLAIL A VC HP +L++L +FF +++W WP PV L D P +
Sbjct: 279 GFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLDQPTP---WRPHC 335
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTR--------DLMRPDFDWHFL 398
S MPI +PCSP E+C S+ITRSTF KI+ E RG T+ D +W L
Sbjct: 336 CSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNGDINWTEL 395
Query: 399 FEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYID 458
F PFPY+ +Y F+R+ LSA ++L DWVGWVKSRFR+L+LKLE + CDP+P+E D
Sbjct: 396 FAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIGVDCDPDPSEQAD 455
Query: 459 VDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQG 499
+ EP++VF+WGL + + I +V++DF+K++ N G
Sbjct: 456 HSMIEPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYG 496
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 255/416 (61%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S D +RS L + + + GL S EE R V+ ++ +IV WVK++ ++
Sbjct: 25 PISLSGPSGSDLQRSRELEEFLVSAGLYESEEESALREEVLAQIDQIVKQWVKQLTREKG 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E++A + T+GSY LGVHG +DID LC+GPE+A EDFF++LH+ML PEV
Sbjct: 85 YTEQMVEESNAKVFTFGSYRLGVHGPGADIDTLCVGPEYADQEEDFFILLHDMLAEMPEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
E++ V DA VP+M+FKF GI IDL YA + + VP+++D+ L ++DE + +SL+G
Sbjct: 145 MELNRVPDAHVPVMKFKFRGISIDLLYASVALRIVPDDLDISQESVLYNVDEQTVRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R N+ IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P
Sbjct: 205 CRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ LV+ FF+ + W WP PVML+ G+ P + MPI P P
Sbjct: 265 IPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPIITPAYPGM 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F +G+ D+ +W LF+P+P+ + Y +++V + A++
Sbjct: 325 NSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPFFEAYKNYLQVDIVAAD 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
QDDL W GWV+SR R L LK+E + G+ C P PTEY+D PH F+ GLQ
Sbjct: 385 QDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCAFFMGLQ 440
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 247/410 (60%), Gaps = 48/410 (11%)
Query: 151 VHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGIL 210
+G ESDID LC+GP AT+ FFVVL ML+ RPEVSE+ ++ AKVPLMRFKF+GIL
Sbjct: 213 AYGPESDIDVLCIGPYIATLQHHFFVVLRQMLEGRPEVSELQSIEGAKVPLMRFKFNGIL 272
Query: 211 IDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 270
+D PY L ++ E + +P L ++D SW+ LSGVRAN+ I+QLVP+++
Sbjct: 273 VDFPYVQLPFINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMK------- 325
Query: 271 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 330
L GF G+HLAIL A+VC+ HP S+NTL++ FF +A+WPWP PV
Sbjct: 326 --------------LLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPV 371
Query: 331 MLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR 390
L DP P + SLMPI LPC+P E+C S+ T STF KI+ E RG+ T+D
Sbjct: 372 SLLDP--PVLCRGPDGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRRGYALTKDTRS 429
Query: 391 PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCD 450
DFDW +LF FPY +Y F+R+ LSA ++L DWVGWVKSRFR+L+LKLE + CD
Sbjct: 430 TDFDWSWLFASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLKLESLGVYCD 489
Query: 451 PNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQG----SPGRMGL 506
P+ +E +D +TEP++VF+WGL R + ++++DF+K++ N G + + +
Sbjct: 490 PDSSEQVDHTITEPNVVFFWGLVFTRNIQICTSSLKEDFMKSVCNNIYGKEKCAHSDITM 549
Query: 507 LVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGY 556
+V QL KS + + VYS+ LP +++G+
Sbjct: 550 AIVGPPQLPKS---------------------IFDLSVYSEKLPQHMMGH 578
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 74 VLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQ 133
V+ MDE RS SL++ +++ G+VPS E+E +R V+++L +IV+ W KRVA+++ +Q
Sbjct: 64 VIVYMDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMEWAKRVAYEQ---GKQ 120
Query: 134 IAETHATILTYGSYGLG 150
T AT+LT+GSY LG
Sbjct: 121 HWITSATVLTFGSYALG 137
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 245/419 (58%), Gaps = 11/419 (2%)
Query: 66 FNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAW 125
F PL+ + D +R+ L + + + GL S EE R+ V+ +L +IV +WVK++
Sbjct: 26 FTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTR 85
Query: 126 QRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSR 185
QR + + + +A I T+GSY LGVHG DID LC+GP + EDFF++LHN+L
Sbjct: 86 QRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEM 145
Query: 186 PEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKS 245
EVSE+ V DA VP+M+FKF GI IDL YA + +L VPE++D+ + L D+DE + +S
Sbjct: 146 EEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRS 205
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH 305
L+G R IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ AILVA +CQ +
Sbjct: 206 LNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLY 265
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCS 357
P + LV+ FF+ Y W WP PVML G+ P + MPI P
Sbjct: 266 PNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAY 325
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS 417
P N++ ST + +F G+ ++ W LF+P+ + + Y +++V +
Sbjct: 326 PCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDII 385
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
AS+ DDL W GWV+SR R L LK+E + G+ C P P EY+D H F+ GLQ
Sbjct: 386 ASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFFMGLQ 444
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 245/420 (58%), Gaps = 11/420 (2%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
+F PL+ + D +R+ L + + + GL S EE R+ V+ +L +IV WVK++
Sbjct: 24 AFTKPLSLAGPTDADLQRNNELDKFLLDSGLYESNEESAARKEVLHRLDQIVKNWVKQLT 83
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
QR + + + +A I T+GSY LGVHG DID LC+GP + EDFFV+LHN+L
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFVILHNILAE 143
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWK 244
EVSE+ V DA VP+M+FKF GI IDL YA + +L VPE++D+ + L D+DE + +
Sbjct: 144 MEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVR 203
Query: 245 SLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN 304
SL+G R IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ AILVA +CQ
Sbjct: 204 SLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQL 263
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTPVMLQD--------PMLPAAGYPSETRSLMPIRLPC 356
+P + LV+ FF+ Y W WP PVML P+ P + MPI P
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPA 323
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N++ ST + +F G+ ++ W LF+P+ + + Y +++V +
Sbjct: 324 YPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDI 383
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
AS+ DDL W GWV+SR R L LK+E + G+ C P P EY+D H F+ GLQ
Sbjct: 384 IASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSAFFMGLQ 443
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 254/432 (58%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 11 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 68
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 69 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 128
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 129 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 188
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L D+DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 189 SVLCDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------S 344
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHR 308
Query: 345 ETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
+ LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A + +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 369 FEAYKNYLQVDIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 429 QFLHCAFFMGLQ 440
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 11 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 68
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 69 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 128
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 129 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 188
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 189 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 308
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 369 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 429 QFLHCAFFMGLQ 440
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 11 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 68
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 69 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 128
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 129 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 188
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 189 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 248
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 249 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 308
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 309 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 368
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 369 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 428
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 429 QFLHCAFFMGLQ 440
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 255/432 (59%), Gaps = 13/432 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P NSP PL+ + D +R++ L + + +EGL S ++ +R V+ ++
Sbjct: 12 LPPLNSPKSY--GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRI 69
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+IV WVK++ QR + + + +A I T+GSY LGVHG +DID LC+GP + E
Sbjct: 70 DQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 129
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF++LH++L EV+E+H V DA VP+M+FKF GI IDL YA + +L VP+++D+ +
Sbjct: 130 DFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSS 189
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++DE + +SL+G R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV
Sbjct: 190 SVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 249
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRS---- 348
+ A+LVA VCQ +P + LV+ FF+ Y W WP PVML G+P R
Sbjct: 250 NWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHR 309
Query: 349 ----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
LMPI P P N+++ST + +F G+N +++ W LFE + +
Sbjct: 310 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMF 369
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDV 461
+ Y +++V + A++ +DL W GWV+SRFR L LK+E + G +C P P EY+D
Sbjct: 370 FEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTAR 429
Query: 462 TEPHIVFYWGLQ 473
H F+ GLQ
Sbjct: 430 QFLHCAFFMGLQ 441
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 246/416 (59%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D R+ L +++T GL S EE +R V+ +L ++V WVK + ++
Sbjct: 15 PISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRKG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ E +A I T+GSY LGVHG +DID LC+GP + EDFF V H ML++ EV
Sbjct: 75 YSEQVTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGMLEAMSEV 134
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V DA VP+MRFKF GI IDL YA L V ++PE++D+ LR+LDE S +SL+G
Sbjct: 135 TELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEPSVRSLNG 194
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRC+KLWA++RGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 195 CRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNA 254
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML + + G P + MPI P P
Sbjct: 255 LPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCM 314
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF R + + +W LFEP+ + Y ++++ + A++
Sbjct: 315 NSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFAAD 374
Query: 421 QDDLGDWVGWVKSRFRSLILKLEE-VQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
DDL W GWV+SR R L LK+E+ G+ C P+P +++D H F+ GLQ
Sbjct: 375 NDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQ 430
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/431 (39%), Positives = 246/431 (57%), Gaps = 16/431 (3%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + GL EE KR +V+ ++ +IV WVK++ ++ + + + +
Sbjct: 35 DLQRTAELEKFLVEAGLYEGKEESAKREDVLCEIGQIVKEWVKQLTSKKGYADQLVEQAN 94
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A + T+GSY LGVHG E+DID LC+GP + EDFFV LH +L + EV+E+ V DA
Sbjct: 95 AVLFTFGSYRLGVHGPEADIDTLCVGPSYVNREEDFFVTLHGILAEKEEVTELQPVPDAH 154
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++FKF GI IDL YA L + +P + D+ L D+DE + +SL+G R IL+L
Sbjct: 155 VPVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCDVDEATVRSLNGCRVADQILRL 214
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+ FF
Sbjct: 215 VPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 274
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRST 370
+ + W WP PVML G+ P + LMPI P P N++ ST
Sbjct: 275 RVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSSYNVSSST 334
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I +F G+ +++ +W+ LFEPF + + Y +F+ V + A N DDL W GW
Sbjct: 335 LRVIMEQFQFGNKICQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAENDDDLRLWKGW 394
Query: 431 VKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL-----QPGRTNLLDI 482
++SR R L LK++ + +G+ C P P EY D + H FY GL R DI
Sbjct: 395 IESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKEGSKKRGQQFDI 454
Query: 483 VAVEKDFLKNI 493
+F++ I
Sbjct: 455 RGTVDEFMREI 465
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 245/419 (58%), Gaps = 18/419 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D ++ L + + + GL S E+ R V+ +L +IV WVK ++ +
Sbjct: 21 PISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEVLGRLDQIVKIWVKAISRAKG 80
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L ++ + E +A I T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV
Sbjct: 81 LNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEV 140
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
SE+H V DA VP+MRFK G+ IDL YA L + +PE++D+ L++ DE + +SL+G
Sbjct: 141 SELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSILQNTDEQTVRSLNG 200
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 201 CRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNA 260
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
N LV+ FF+ + W WP PVML + G P + LMPI P P
Sbjct: 261 LPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCM 320
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF RGH+ + DW LFEP+P+ + Y ++++ ++A N
Sbjct: 321 NSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPFFEAYKNYLQIDITAEN 380
Query: 421 QDDLGDWVGWVKSRFRSLILKLEE-----VQGLCDPNPTEYIDVDVTEP-HIVFYWGLQ 473
DD+ W GWV+SR R L LK+E +Q C P P ++ D + P H ++ GLQ
Sbjct: 381 DDDIRIWKGWVESRLRQLTLKIERHTYNMLQ--CHPYPGDF--SDKSRPFHHCYFMGLQ 435
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/412 (41%), Positives = 239/412 (58%), Gaps = 17/412 (4%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D ++ L + + + GL S EE R V+ +L +IV WVK ++ +RL ++ + E
Sbjct: 20 EYDVTKTRELEKFLQDAGLYESQEEAVSREEVLGRLDQIVKNWVKVISRAKRLNEQLVQE 79
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A I T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV+E+H V D
Sbjct: 80 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMPEVTELHPVPD 139
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+MRFKF G+ IDL YA L + +PE++DV L + DE + +SL+G R IL
Sbjct: 140 AHVPVMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADEQTVRSLNGCRVTDQIL 199
Query: 257 QLVPD---LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
+LVP+ ++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA +CQ P N L
Sbjct: 200 RLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNML 259
Query: 314 VANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSN 365
V+ FF+ Y W WP PVML + G P + LMPI P P N
Sbjct: 260 VSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPSMNSSYN 319
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
++ ST + EF RG+ + +W LFEPF + + Y ++++ +SA N+DDL
Sbjct: 320 VSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEPFSFFEAYKNYLQIDISAENEDDLR 379
Query: 426 DWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGLQ 473
W GWV+SR R L LK+E C P+P E+ D + P H ++ GLQ
Sbjct: 380 QWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEF--SDKSRPLHCSYFMGLQ 429
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 242/412 (58%), Gaps = 18/412 (4%)
Query: 76 DQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+++D ++ L + + GL S EE R V+ +L +IV WVK ++ + L ++ +
Sbjct: 28 NELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAKGLNEQLVQ 87
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
E +A I T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV+E+H V
Sbjct: 88 EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVP 147
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
DA VP+MRFKF G+ IDL YA L + +PE++DV L++ DE + +SL+G R I
Sbjct: 148 DAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQI 207
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L+LVP+++ F+ LR ++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P + LV+
Sbjct: 208 LRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVS 267
Query: 316 NFFKTYAYWPWPTPVMLQDPMLPAAG--------YPSETRSLMPIRLPCSPHEYCHSNIT 367
FF+ Y W WP PVML G YP + LMPI P P N++
Sbjct: 268 RFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVS 327
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
ST + EF RG+ + + DW L EP+P+ + Y ++++ ++A N DDL W
Sbjct: 328 SSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADDLRKW 387
Query: 428 VGWVKSRFRSLILKLEE-----VQGLCDPNPTEYIDVDVTEP-HIVFYWGLQ 473
GWV+SR R L LK+E +Q C P+P ++ D + P H ++ GLQ
Sbjct: 388 KGWVESRLRQLTLKIERHTYNMLQ--CHPHPGDF--SDKSRPFHCCYFMGLQ 435
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 252/438 (57%), Gaps = 11/438 (2%)
Query: 54 VPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLK 113
+P N V P++ + D +R+ L + + + GL S EE KR V+ ++
Sbjct: 16 LPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIG 75
Query: 114 EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAED 173
+IV WVK++ + + + + +A I T+GSY LGVHG +DID LC+GP + ED
Sbjct: 76 QIVKDWVKQLTRIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 135
Query: 174 FFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPF 233
FF +LHN+L+ EVSE+ V DA VP+M+FKFDGI IDL YA + L VPE++D+ +
Sbjct: 136 FFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVS 195
Query: 234 FLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVH 293
L ++DE + +SL+G R IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+
Sbjct: 196 VLYNVDEPTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGGVN 255
Query: 294 LAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLPAAGY-----PSE 345
A+LVA VCQ +P + L++ FF+ Y W WP PVML ++ L + + P +
Sbjct: 256 WALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRD 315
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYS 405
MPI P P N++ ST + +F G+ ++ W LFEP+ +
Sbjct: 316 RTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFF 375
Query: 406 KKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE---EVQGLCDPNPTEYIDVDVT 462
+ Y +++V + A++ DDL W GWV+SRFR L L +E E + C P P EY+D
Sbjct: 376 ESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKP 435
Query: 463 EPHIVFYWGLQPGRTNLL 480
H F+ GLQ + ++
Sbjct: 436 CAHCAFFMGLQRKQGEII 453
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 243/406 (59%), Gaps = 12/406 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R++ L + + + L S EE KR V+ ++ +IV +WVK++ R ++ + + +
Sbjct: 35 DIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLTLLRGYTEQMVEDAN 94
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A I T+GSY LGVHG SDID LC+GP + EDFF++LHN+L EV+++ V DA
Sbjct: 95 AVIFTFGSYRLGVHGPGSDIDTLCVGPSYVNR-EDFFIILHNILAEMEEVTDLQPVPDAH 153
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+MRFKF GI IDL YA + +L VPE++D+ + L ++DE + +SL+G R IL+L
Sbjct: 154 VPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVRSLNGCRVADQILRL 213
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+ FF
Sbjct: 214 VPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQLYPNAIPSMLVSRFF 273
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRST 370
+ Y W WP PVML G+ P + LMPI P P N++ ST
Sbjct: 274 RVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSSYNVSTST 333
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ +F G++ ++ W LFEP+ + + Y +++V + A++ DDL W GW
Sbjct: 334 LRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAADADDLLAWKGW 393
Query: 431 VKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
V+SRFR L LK+E + +G+ C P P EY D H F+ GLQ
Sbjct: 394 VESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQ 439
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/406 (41%), Positives = 237/406 (58%), Gaps = 18/406 (4%)
Query: 82 RSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATI 141
+S L + + + GL S EE R V+ +L +IV WVK ++ + L ++ + E +A I
Sbjct: 36 KSRELEKFLQDMGLYESREESVSREEVLGRLDQIVKHWVKVISRAKGLNEQLVQEANAKI 95
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV+E+H V DA VP+
Sbjct: 96 FTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMPEVTELHPVPDAHVPV 155
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
++FKF G+ IDL YA L + +PE++D+ L++ DE + +SL+G R IL+LVP+
Sbjct: 156 LKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPN 215
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTY 321
++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA +CQ P N LV+ FF+ Y
Sbjct: 216 IQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNMLVSRFFRVY 275
Query: 322 AYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
W WP PVML + G P + LMPI P P N++ ST
Sbjct: 276 TQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSASTLRI 335
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
+ EF RG+ + DW+ LFE F + Y ++++ + A N+DDL W GWV+S
Sbjct: 336 MSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYKNYLQIDIGAENEDDLRKWKGWVES 395
Query: 434 RFRSLILKLEE-----VQGLCDPNPTEYIDVDVTEP-HIVFYWGLQ 473
R R L LK+E +Q C P+P E+ D + P H ++ GLQ
Sbjct: 396 RLRQLTLKIERHTFNMLQ--CHPHPGEF--TDKSRPLHCSYFMGLQ 437
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 254/451 (56%), Gaps = 17/451 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D +RSL L + + + GL S EE KR V+ +L +IV WVK++ R
Sbjct: 24 PISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVKQLTRLRG 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A + T+GSY LGVHG +DID LC+GP + + EDFF +LHN+L EV
Sbjct: 84 YTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKFDGI IDL YA + +L VPE++D+ + L ++DE + +SL+G
Sbjct: 144 TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P
Sbjct: 204 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML G+ P + MPI P P
Sbjct: 264 VPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCM 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ + + W LFEP+ + + Y +++V + A +
Sbjct: 324 NSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVD 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLEE---VQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRT 477
DDL W GWV+SR R L L +E + C P P EY+D H F+ GLQ +
Sbjct: 384 IDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQG 443
Query: 478 NLL------DIVAVEKDFLKNIHNGFQGSPG 502
++ DI +F +I+ PG
Sbjct: 444 EIIQEGQQFDIRGTVDEFRHSINMYMFWKPG 474
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 241/406 (59%), Gaps = 11/406 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+L L + + +EGL S EE +R V+ ++ +IV WVK++ QR + + + +
Sbjct: 39 DVKRNLELEKFLVDEGLYESKEETMRREEVLVRIDQIVKHWVKQLTRQRGYTDQMVDDAN 98
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A I T+GSY LGVHG +DID LC+GP + EDFF++L +ML EV+E+ V DA
Sbjct: 99 AVIFTFGSYRLGVHGPRADIDTLCVGPSYVNREEDFFIILRDMLAEMEEVTELQPVTDAH 158
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M+FKF GI IDL YA + +L +P+++D+ N L D+DE + +SL+G R IL+L
Sbjct: 159 VPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKL 218
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+ E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA +CQ +P + LV+ FF
Sbjct: 219 VPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQLYPNAIPSMLVSRFF 278
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
+ Y W WP PVML +P + LMPI P P N+++ST
Sbjct: 279 RVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQST 338
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ +F G+ +++ W LFE + + + Y +++V + A + +DL W GW
Sbjct: 339 LRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMFFEAYKNYLQVDVLALDAEDLLAWKGW 398
Query: 431 VKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
V+SRFR L LK+E + G +C P P EY+D H F+ GLQ
Sbjct: 399 VESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMGLQ 444
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 245/423 (57%), Gaps = 11/423 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D +RSL L + + + GL S EE KR V+ +L +IV WVK++ R
Sbjct: 24 PISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVKQLTRLRG 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A + T+GSY LGVHG +DID LC+GP + + EDFF +LHN+L EV
Sbjct: 84 YTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKFDGI IDL YA + +L VPE++D+ + L ++DE + +SL+G
Sbjct: 144 TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P
Sbjct: 204 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML G+ P + MPI P P
Sbjct: 264 VPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCM 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ + + W LFEP+ + + Y +++V + A +
Sbjct: 324 NSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVD 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLEE---VQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRT 477
DDL W GWV+SR R L L +E + C P P EY+D H F+ GLQ +
Sbjct: 384 IDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQG 443
Query: 478 NLL 480
++
Sbjct: 444 EII 446
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 242/412 (58%), Gaps = 18/412 (4%)
Query: 76 DQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+++D ++ L + + GL S EE R V+ +L +IV WVK ++ + L ++ +
Sbjct: 28 NELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAKGLNEQLVQ 87
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
E +A I T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV+E+H V
Sbjct: 88 EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVP 147
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
DA VP+MRFKF G+ IDL YA L + +PE++DV L++ DE + +SL+G R I
Sbjct: 148 DAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQI 207
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L+LVP+++ F+ LR ++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P + LV+
Sbjct: 208 LRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVS 267
Query: 316 NFFKTYAYWPWPTPVMLQDPMLPAAG--------YPSETRSLMPIRLPCSPHEYCHSNIT 367
FF+ Y W WP PVML G YP + LMPI P P N++
Sbjct: 268 RFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVS 327
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
ST + EF RG+ + + DW L EP+P+ + Y ++++ ++A N DDL W
Sbjct: 328 SSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADDLRKW 387
Query: 428 VGWVKSRFRSLILKLEE-----VQGLCDPNPTEYIDVDVTEP-HIVFYWGLQ 473
GWV+SR R L LK+E +Q C P+P ++ D + P H ++ GLQ
Sbjct: 388 KGWVESRLRQLTLKIERHTYNMLQ--CHPHPGDF--SDKSRPFHCCYFMGLQ 435
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D R+ L +++T GL S EE +R V+ +L ++V WVK + ++
Sbjct: 15 PISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRKG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ E +A I T+GSY LGVHG +DID LC+GP + EDFF V H ML++ EV
Sbjct: 75 YSEQLTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGMLEAMSEV 134
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V DA VP+MRFKF GI IDL YA L V ++PE++D+ LR+LDE S +SL+G
Sbjct: 135 TELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEPSVRSLNG 194
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRC+KLWA++RGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 195 CRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNA 254
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML + + G P + MPI P P
Sbjct: 255 LPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCM 314
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF R + + +W LFEP+ + Y ++++ + A++
Sbjct: 315 NSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFAAD 374
Query: 421 QDDLGDWVGWVKSRFRSLILKL---EEVQ----GL--CDPNPTEYIDVDVTEPHIVFYWG 471
DDL W GWV+SR R L LK+ E++ G+ C P+P +++D H F+ G
Sbjct: 375 NDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMG 434
Query: 472 LQ 473
LQ
Sbjct: 435 LQ 436
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 170/419 (40%), Positives = 247/419 (58%), Gaps = 15/419 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D R+ L +L++N GL S EE KR V+ +L +IV +WV+++ +
Sbjct: 3 PLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNKG 62
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
E + E +A I T+GSY LGVHG SDID LC+GP AT EDFFV LHN+L V
Sbjct: 63 FSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETENV 122
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E++ V +A VP+M+FKFDGI IDL YA L ++PE++D+ + +++LDE S SL+G
Sbjct: 123 TELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLNG 182
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRC+K WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 183 CRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPNA 242
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY-----------PSETRSLMPIRLPCS 357
+TLV+ FF+ Y W WP PVML P+ + P + LMPI P
Sbjct: 243 VPSTLVSRFFRVYTQWRWPNPVMLC-PIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS 417
P N++ ST + EF RG+ L W LFE F + + Y ++++ +
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVV 361
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
A + D W GWV+SR R L LK+E + G+ C P+P++++D+ H ++ GLQ
Sbjct: 362 AIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQ 420
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 247/419 (58%), Gaps = 15/419 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D R+ L +L++N GL S EE KR V+ +L +IV +WV+++ +
Sbjct: 3 PLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNKG 62
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
E + E +A I T+GSY LGVHG SDID LC+GP AT EDFFV LHN+L V
Sbjct: 63 FSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETENV 122
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E++ V +A VP+M+FKFDGI IDL YA L ++PE++D+ + +++LDE S SL+G
Sbjct: 123 TELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLNG 182
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRC+K WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 183 CRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPNA 242
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY-----------PSETRSLMPIRLPCS 357
+TL++ FF+ Y W WP PVML P+ + P + LMPI P
Sbjct: 243 VPSTLISRFFRVYTQWRWPNPVMLC-PIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS 417
P N++ ST + EF RG+ L W LFE F + + Y ++++ +
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVV 361
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
A + D W GWV+SR R L LK+E + G+ C P+P++++D+ H ++ GLQ
Sbjct: 362 AIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQ 420
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/438 (39%), Positives = 251/438 (57%), Gaps = 17/438 (3%)
Query: 48 SPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRN 107
SP Q N V P++ + D ++ L + + + GL S EE +R
Sbjct: 3 SPGQTATQSNGQYLGVTE---PISLGGPSEFDYIKTAELEKFLVSAGLYESQEEAVRREE 59
Query: 108 VIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEF 167
V+ +L +IV WV++++ + ++ + E +A I T+GSY LGVHG +DID LC+GP
Sbjct: 60 VLGRLDQIVKVWVRKISRNKGFGEQVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRH 119
Query: 168 ATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENV 227
AT EDFF+ L+ ML PEV+E+H V DA VP+M+FKF+GI IDL YA L + +PE++
Sbjct: 120 ATREEDFFIELYEMLADMPEVTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDL 179
Query: 228 DVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHG 287
D+ LR+ DE + +SL+G R IL+LVP+++ F+ LRC+KLWAKRRGVY N+ G
Sbjct: 180 DISQDSILRNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAG 239
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML----QDPM-LPA--- 339
FLGGV+ A+LVA +CQ +P + LV FF+ Y W WP PVML + P+ LP
Sbjct: 240 FLGGVNWALLVARICQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDP 299
Query: 340 AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF 399
P + MPI P P N++ ST + EF R + +L W+ LF
Sbjct: 300 RKNPRDRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILF 359
Query: 400 EPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEY 456
E +P+ + Y ++ + +SA DDL W GW +SR R L LK+E + G+ C P+P ++
Sbjct: 360 ETYPFFEAYKNYLEIDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDF 419
Query: 457 IDVDVTEP-HIVFYWGLQ 473
D P H F+ GLQ
Sbjct: 420 --SDPQRPYHCCFFMGLQ 435
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 252/431 (58%), Gaps = 15/431 (3%)
Query: 82 RSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATI 141
RS L +++ + G+ EE KR +I+KL+ +V +WVK+V + + + +A I
Sbjct: 29 RSFELEKVLWDGGVYQVEEEARKREEIIEKLRVVVKSWVKQVTRWKGYTDKMVENANALI 88
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
+T+GSY LGVHG SDID LC+GP + EDFF+ LHN+L VSE+ + A VP+
Sbjct: 89 VTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFIRLHNILIGMEGVSELLPIPHAHVPV 148
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
M+FKF+G+ IDL YA + L VP+++D+ N L + DE + +SLSG R IL+LVP+
Sbjct: 149 MKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADEPTVRSLSGCRVADQILRLVPN 208
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTY 321
+E F+ LRC+K WAKRRGVY N+ GFLGGV+LA+LVA VCQ +P + + LV+ FF+ Y
Sbjct: 209 VEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNANPSMLVSRFFRVY 268
Query: 322 AYWPWPTPVML---QD-----PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
W WP PVML +D P+ P + MPI P P+ +++ ST
Sbjct: 269 TQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPIITPAYPNMNSSYSVSTSTLEA 328
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
+ +F + D+ W LFEPF + + Y +++V ++A++ DDL W GWV+S
Sbjct: 329 MMKQFHTANKICNDIELNKSSWGALFEPFLFFRSYQNYLQVDITATDADDLRAWKGWVES 388
Query: 434 RFRSLILKLEEV---QGLCDPNPTEYIDVDVTEPHIVFYWGL--QPGRT--NLLDIVAVE 486
R R L LK+E + LC P P EY+D H ++ GL +PG ++DI
Sbjct: 389 RLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCTYFMGLRKKPGVEVGEVIDIRVAT 448
Query: 487 KDFLKNIHNGF 497
++F + I N F
Sbjct: 449 QEFKEEIVNMF 459
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 245/431 (56%), Gaps = 16/431 (3%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + GL EE KR +V+ ++ IV WVK++ ++ ++ + + +
Sbjct: 35 DLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEWVKQLTRKKGYAEQLVEQAN 94
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A + T+GSY LGVHG +DID LC+GP + EDFFV LH +L + EV+E+ V DA
Sbjct: 95 AILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAEKEEVAELQPVPDAH 154
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++FKF GI IDL YA + + +P + D+ L D+DE + +SL+G R IL+L
Sbjct: 155 VPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVRSLNGCRVADQILRL 214
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+ FF
Sbjct: 215 VPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 274
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRST 370
+ + W WP PVML G+ P + LMPI P P N++ ST
Sbjct: 275 RVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSSYNVSTST 334
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I +F G+ +++ +W+ LFEPF + + Y +F+ V + A + DDL W GW
Sbjct: 335 LRVIMEQFQFGNKVCQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAEDDDDLRLWKGW 394
Query: 431 VKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ-----PGRTNLLDI 482
++SR R L LK+E + +G+ C P P EY D + H FY GL R DI
Sbjct: 395 IESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKEGLKKRGQQFDI 454
Query: 483 VAVEKDFLKNI 493
+F++ I
Sbjct: 455 RGTVDEFMREI 465
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 244/416 (58%), Gaps = 12/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D ++ L + + + GL + EE +R V+ ++ +IV WVK V+ +
Sbjct: 20 PISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVSRAKG 79
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A I T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV
Sbjct: 80 FNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAETPEV 139
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
E+H V DA VP+M+FKF+G+ IDL YA L + +PE++D+ L+++DE + +SL+G
Sbjct: 140 QELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVRSLNG 199
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 200 CRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNA 259
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
+TLV+ FF+ Y W WP PVML G P + LMPI P P
Sbjct: 260 VPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSM 319
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + E RG+ +++ + W LFEPF + + Y ++++ ++A N
Sbjct: 320 NSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITAEN 379
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
DL +W GWV+SR R L K+E G C P+P E+ D + H ++ GL+
Sbjct: 380 DVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRS-FHYCYFMGLR 434
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/406 (41%), Positives = 242/406 (59%), Gaps = 12/406 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R++ L + + + L S EE KR V+ ++ +IV +WVK++ R ++ + + +
Sbjct: 35 DIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLTLLRGYTEQMVEDAN 94
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A T+GSY LGVHG SDID LC+GP + EDFF++LHN+L EV+++ V DA
Sbjct: 95 AVXFTFGSYRLGVHGPGSDIDTLCVGPSYVN-REDFFIILHNILAEMEEVTDLQPVPDAH 153
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+MRFKF GI IDL YA + +L VPE++D+ + L ++DE + +SL+G R IL+L
Sbjct: 154 VPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVRSLNGCRVADQILRL 213
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+ FF
Sbjct: 214 VPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQLYPNAIPSMLVSRFF 273
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRST 370
+ Y W WP PVML G+ P + LMPI P P N++ ST
Sbjct: 274 RVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSSYNVSTST 333
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ +F G++ ++ W LFEP+ + + Y +++V + A++ DDL W GW
Sbjct: 334 LRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAADADDLLAWKGW 393
Query: 431 VKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
V+SRFR L LK+E + +G+ C P P EY D H F+ GLQ
Sbjct: 394 VESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQ 439
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 244/416 (58%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D +R+L L + + +EGL S EE +R V+ ++ +IV WVK++ QR
Sbjct: 28 PLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQRG 87
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A I T+GSY LGVHG +DID LC+GP + EDFF+ ++L EV
Sbjct: 88 YTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEV 147
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF GI IDL YA + +L +P+++D+ N L D+DE + +SL+G
Sbjct: 148 TELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNG 207
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 208 CRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNA 267
Query: 309 SLNTLVANFFKTYAYWPWPTPVML-----QDPMLPAAGYPSETRS---LMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML D P R LMPI P P
Sbjct: 268 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCM 327
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+++ST + +F G+ +++ W LF+ + + + Y +++V + A++
Sbjct: 328 NSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAAD 387
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
+DL W GWV+SRFR L LK+E + G +C P P EY+D H F+ GLQ
Sbjct: 388 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQ 443
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 244/416 (58%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D +R+L L + + +EGL S EE +R V+ ++ +IV WVK++ QR
Sbjct: 28 PLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQRG 87
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A I T+GSY LGVHG +DID LC+GP + EDFF+ ++L EV
Sbjct: 88 YTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEV 147
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF GI IDL YA + +L +P+++D+ N L D+DE + +SL+G
Sbjct: 148 TELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNG 207
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 208 CRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNA 267
Query: 309 SLNTLVANFFKTYAYWPWPTPVML-----QDPMLPAAGYPSETRS---LMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML D P R LMPI P P
Sbjct: 268 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCM 327
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+++ST + +F G+ +++ W LF+ + + + Y +++V + A++
Sbjct: 328 NSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAAD 387
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
+DL W GWV+SRFR L LK+E + G +C P P EY+D H F+ GLQ
Sbjct: 388 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQ 443
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 244/416 (58%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D +R+L L + + +EGL S EE +R V+ ++ +IV WVK++ QR
Sbjct: 28 PLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQRG 87
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A I T+GSY LGVHG +DID LC+GP + EDFF+ ++L EV
Sbjct: 88 YTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEV 147
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF GI IDL YA + +L +P+++D+ N L D+DE + +SL+G
Sbjct: 148 TELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNG 207
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 208 CRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNA 267
Query: 309 SLNTLVANFFKTYAYWPWPTPVML-----QDPMLPAAGYPSETRS---LMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML D P R LMPI P P
Sbjct: 268 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCM 327
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+++ST + +F G+ +++ W LF+ + + + Y +++V + A++
Sbjct: 328 NSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAAD 387
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
+DL W GWV+SRFR L LK+E + G +C P P EY+D H F+ GLQ
Sbjct: 388 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQ 443
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 244/416 (58%), Gaps = 12/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D ++ L + + + GL + EE +R V+ ++ +IV WVK V+ +
Sbjct: 20 PISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVSRAKG 79
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A I T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV
Sbjct: 80 FNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAETPEV 139
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
E+H V DA VP+M+FKF+G+ IDL YA L + +PE++D+ L+++DE + +SL+G
Sbjct: 140 QELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVRSLNG 199
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 200 CRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNA 259
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
+TLV+ FF+ Y W WP PVML G P + LMPI P P
Sbjct: 260 VPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSM 319
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + E RG+ +++ + W LFEPF + + Y ++++ ++A N
Sbjct: 320 NSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITAEN 379
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
DL +W GWV+SR R L K+E G C P+P E+ D + H ++ GL+
Sbjct: 380 DVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRS-FHYCYFMGLR 434
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 244/416 (58%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D +R+L L + + +EGL S EE +R V+ ++ +IV WVK++ QR
Sbjct: 28 PLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQRG 87
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A I T+GSY LGVHG +DID LC+GP + EDFF+ ++L EV
Sbjct: 88 YTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEV 147
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF GI IDL YA + +L +P+++D+ N L D+DE + +SL+G
Sbjct: 148 TELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNG 207
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 208 CRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNA 267
Query: 309 SLNTLVANFFKTYAYWPWPTPVML-----QDPMLPAAGYPSETRS---LMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML D P R LMPI P P
Sbjct: 268 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCM 327
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+++ST + +F G+ +++ W LF+ + + + Y +++V + A++
Sbjct: 328 NSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAAD 387
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
+DL W GWV+SRFR L LK+E + G +C P P EY+D H F+ GLQ
Sbjct: 388 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQ 443
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 258/445 (57%), Gaps = 22/445 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D R+ + + + + GL S EE R V+ KL +IV AW+K+
Sbjct: 16 PISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASG 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A I T+GSY LGVHG +DID LC+GP AT E FF L++ML PEV
Sbjct: 76 FGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEV 135
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V DA VP+++FK +G+ IDL YA L + +PE++D+ + L ++DE + +SL+G
Sbjct: 136 TELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNG 195
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR ++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 196 CRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNA 255
Query: 309 SLNTLVANFFKTYAYWPWPTPVML---QDPML------PAAGYPSETRSLMPIRLPCSPH 359
S + L++ FFK Y+ W WP PVML ++ L P + MPI P P
Sbjct: 256 SPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHH-MPIITPAYPS 314
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N++ ST + + EF R + + + + DW LFEP+P+ + Y ++++ ++A
Sbjct: 315 MNSSYNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPFFESYRNYLKIEITAR 374
Query: 420 NQDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL--- 472
N+DDL +W GWV+SR R+L+LK+E L PNP ++I D + P H ++ GL
Sbjct: 375 NEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFI--DSSRPLHCFYFMGLWKK 432
Query: 473 ---QPGRTNLLDIVAVEKDFLKNIH 494
Q DI A+ +F NIH
Sbjct: 433 QISQAQEAEQYDIRAIVNEFKSNIH 457
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/404 (40%), Positives = 237/404 (58%), Gaps = 14/404 (3%)
Query: 82 RSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATI 141
++ L + + GL S EE R V+ +L +IV WVK ++ + ++ + E +A I
Sbjct: 34 KTRELEKYLQGVGLYESQEEAVGREEVLGRLDQIVKIWVKNISRAKGFNEQLVHEANAKI 93
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
T+GSY LGVHG +DID LC+GP A+ EDFF L ML EV+E+H V DA VP+
Sbjct: 94 FTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKMLSEMQEVTELHPVPDAHVPV 153
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
M+FKF+G+ +DL YA L + +P+++D+ L+++DE + SL+G R +L+LVP+
Sbjct: 154 MKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVPN 213
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTY 321
++ F+ LRC++ WAKRRGVY N+ GFLGG++LA+LVA +CQ +P N LV+ FF+ Y
Sbjct: 214 IQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPNMLVSRFFRVY 273
Query: 322 AYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
W WP PVML + G P + LMPI P P N+T ST
Sbjct: 274 TQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRV 333
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
+ EF RG + DW LFEP+P+ + Y ++++ ++A N DDL W GWV+S
Sbjct: 334 MSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVES 393
Query: 434 RFRSLILKLEE-VQGL--CDPNPTEYIDVDVTEP-HIVFYWGLQ 473
R R L LK+E G+ C P+P E+ D + P H ++ GLQ
Sbjct: 394 RLRQLTLKIERHTYGMLQCHPHPGEF--SDNSRPFHHCYFMGLQ 435
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/405 (40%), Positives = 235/405 (58%), Gaps = 11/405 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + GL S +E +R V+ +L +IV WVK++ QR + + E +
Sbjct: 17 DVQRTAELNKFLVEAGLYESADESARREEVLGELDKIVKVWVKQLTSQRGYTDQMVEEAN 76
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A + T+GSY LGVHG +DID LC+GP + EDFF+VLH++L EVS++ V DA
Sbjct: 77 AVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVSQLQPVPDAH 136
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R IL+L
Sbjct: 137 VPVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDEATVRSLTGCRVADQILRL 196
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WA+RRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+ FF
Sbjct: 197 VPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 256
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRST 370
+ + W WPTPVML G+ P + MPI P P N++ ST
Sbjct: 257 RVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTST 316
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ +F G+ +++ W LFEPF + + Y +++V + A + +DL W GW
Sbjct: 317 LRVMIEQFQFGNKICQEIEMNKASWSALFEPFNFFEAYKNYLQVDIIAEDDEDLRLWKGW 376
Query: 431 VKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGL 472
V+SR R L LK+E + G C P P EY D H F+ GL
Sbjct: 377 VESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGL 421
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 257/445 (57%), Gaps = 22/445 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D R+ + + + + GL S EE R V+ KL +IV AW+K+
Sbjct: 37 PISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASG 96
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A I T+GSY LGVHG +DID LC+GP AT E FF L++ML PEV
Sbjct: 97 FGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEV 156
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V DA VP+++FK +G+ IDL YA L + +PE++D+ + L ++DE + +SL+G
Sbjct: 157 TELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNG 216
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR ++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 217 CRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNA 276
Query: 309 SLNTLVANFFKTYAYWPWPTPVML---QDPML------PAAGYPSETRSLMPIRLPCSPH 359
S + L++ FFK Y+ W WP PVML ++ L P + MPI P P
Sbjct: 277 SPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHH-MPIITPAYPS 335
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N++ ST + + EF R + + + DW LFEP+P+ + Y ++++ ++A
Sbjct: 336 MNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITAR 395
Query: 420 NQDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL--- 472
N+DDL +W GWV+SR R+L+LK+E L PNP ++I D + P H ++ GL
Sbjct: 396 NEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFI--DSSRPLHCFYFMGLWKK 453
Query: 473 ---QPGRTNLLDIVAVEKDFLKNIH 494
Q DI A+ +F NIH
Sbjct: 454 QISQAQEAEQYDIRAIVNEFKSNIH 478
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 257/445 (57%), Gaps = 22/445 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D R+ + + + + GL S EE R V+ KL +IV AW+K+
Sbjct: 16 PISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASG 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A I T+GSY LGVHG +DID LC+GP AT E FF L++ML PEV
Sbjct: 76 FGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEV 135
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V DA VP+++FK +G+ IDL YA L + +PE++D+ + L ++DE + +SL+G
Sbjct: 136 TELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNG 195
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR ++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 196 CRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNA 255
Query: 309 SLNTLVANFFKTYAYWPWPTPVML---QDPML------PAAGYPSETRSLMPIRLPCSPH 359
S + L++ FFK Y+ W WP PVML ++ L P + MPI P P
Sbjct: 256 SPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHH-MPIITPAYPS 314
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N++ ST + + EF R + + + DW LFEP+P+ + Y ++++ ++A
Sbjct: 315 MNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITAR 374
Query: 420 NQDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL--- 472
N+DDL +W GWV+SR R+L+LK+E L PNP ++I D + P H ++ GL
Sbjct: 375 NEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFI--DSSRPLHCFYFMGLWKK 432
Query: 473 ---QPGRTNLLDIVAVEKDFLKNIH 494
Q DI A+ +F NIH
Sbjct: 433 QISQAQEAEQYDIRAIVNEFKSNIH 457
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 257/445 (57%), Gaps = 22/445 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D R+ + + + + GL S EE R V+ KL +IV AW+K+
Sbjct: 16 PISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASG 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A I T+GSY LGVHG +DID LC+GP AT E FF L++ML PEV
Sbjct: 76 FGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEV 135
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V DA VP+++FK +G+ IDL YA L + +PE++D+ + L ++DE + +SL+G
Sbjct: 136 TELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNG 195
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR ++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P
Sbjct: 196 CRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNA 255
Query: 309 SLNTLVANFFKTYAYWPWPTPVML---QDPML------PAAGYPSETRSLMPIRLPCSPH 359
S + L++ FFK Y+ W WP PVML ++ L P + MPI P P
Sbjct: 256 SPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHH-MPIITPAYPS 314
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N++ ST + + EF R + + + DW LFEP+P+ + Y ++++ ++A
Sbjct: 315 MNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITAR 374
Query: 420 NQDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL--- 472
N+DDL +W GWV+SR R+L+LK+E L PNP ++I D + P H ++ GL
Sbjct: 375 NEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFI--DSSRPLHCFYFMGLWKK 432
Query: 473 ---QPGRTNLLDIVAVEKDFLKNIH 494
Q DI A+ +F NIH
Sbjct: 433 QISQAQEAEQYDIRAIVNEFKSNIH 457
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/407 (40%), Positives = 240/407 (58%), Gaps = 11/407 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D +++ L + + GL S EE +R V+ +L +IV WVK++ QR + + E
Sbjct: 33 EVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGYTDQMVEE 92
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH++L EV+E+ V D
Sbjct: 93 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPD 152
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R IL
Sbjct: 153 AHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQIL 212
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP++E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 213 RLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 272
Query: 317 FFKTYAYWPWPTPVML----QD----PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ + W WP PVML +D P+ Y + MPI P P N++
Sbjct: 273 FFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVST 332
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + +F G+ +++ +W LFEPF + + Y +++V + A + +DL W
Sbjct: 333 STLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLWK 392
Query: 429 GWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 393 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 439
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/415 (39%), Positives = 244/415 (58%), Gaps = 11/415 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D +++ L + + GL S EE +R V+ +L +IV WVK++ QR
Sbjct: 25 PISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRG 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A + T+GSY LGVHG +DID LC+GP + EDFF+VLH++L EV
Sbjct: 85 YTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA VCQ +P
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVML----QD----PMLPAAGYPSETRSLMPIRLPCSPHE 360
+ LV+ FF+ + W WP PVML +D P+ Y + MPI P P
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCM 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ +++ +W LFEPF + + Y +++V + A +
Sbjct: 325 NSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAED 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
+DL W GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 385 GEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 439
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/415 (39%), Positives = 244/415 (58%), Gaps = 11/415 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D +++ L + + GL S EE +R V+ +L +IV WVK++ QR
Sbjct: 25 PISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRG 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A + T+GSY LGVHG +DID LC+GP + EDFF+VLH++L EV
Sbjct: 85 YTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRC+K WAK+RGVY N+ GFLGGV+ A+LVA VCQ +P
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVML----QD----PMLPAAGYPSETRSLMPIRLPCSPHE 360
+ LV+ FF+ + W WP PVML +D P+ Y + MPI P P
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCM 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ +++ +W LFEPF + + Y +++V + A +
Sbjct: 325 NSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAED 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
+DL W GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 385 GEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 439
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 235/407 (57%), Gaps = 11/407 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D +R+ L + + GL S +E +R V+ KL +IV WVK++ QR + + E
Sbjct: 24 EADLQRTAELEKFLVEAGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGYTDQMVEE 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH +L +V+E+ V D
Sbjct: 84 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPD 143
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R I+
Sbjct: 144 AHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQII 203
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 204 RLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 263
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ + W WP PVML G+ P + MPI P P N++
Sbjct: 264 FFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVST 323
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + +F G+ +++ W LFEPF + + Y +++V + A + +DL W
Sbjct: 324 STLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWK 383
Query: 429 GWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 384 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 430
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/407 (40%), Positives = 236/407 (57%), Gaps = 14/407 (3%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D ++L L + + GL S EE R V+ +L +IV WVK ++ + ++ + E +
Sbjct: 31 DAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVKIWVKNISRAKGFNEQLVHEAN 90
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A I T GSY LGVHG +DID LC+GP A+ EDFF L ML EV+E+H V DA
Sbjct: 91 AKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKMLSEMQEVTELHPVPDAH 150
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++FKF+G+ +DL YA L + +PE++D+ L+ +DE + SL+G R +L+L
Sbjct: 151 VPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQSVDEQTVLSLNGCRVTDQVLRL 210
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+++ F+ LRC++ WAKRRGVY N+ GFLGG++LA+LVA +CQ +P + LV+ FF
Sbjct: 211 VPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPDMLVSRFF 270
Query: 319 KTYAYWPWPTPVMLQD--------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
+ Y W WP PVML P+ P + LMPI P P N+T ST
Sbjct: 271 RVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYPCMNSTYNVTSST 330
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ EF RG + DW LFEP+P+ + Y ++++ ++A N DDL W GW
Sbjct: 331 LRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGW 390
Query: 431 VKSRFRSLILKLEE-VQGL--CDPNPTEYIDVDVTEP-HIVFYWGLQ 473
V SR R L LK+E G+ C P+P E+ D + P H ++ GLQ
Sbjct: 391 VGSRLRQLTLKIERHTYGMLQCHPHPGEF--SDNSRPFHHCYFMGLQ 435
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 247/416 (59%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D R+ LV+ + + GL S EE KR V+ ++ +IV W+K++ QR
Sbjct: 32 PISLAGPSEADLLRNADLVKFLVDSGLYESKEENLKREEVLCRIDQIVKDWIKQLTRQRG 91
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A I T+GSY LGVHG +DID LC+GP + EDFF++LH++L E+
Sbjct: 92 YSDQMVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHDILAEMDEI 151
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF GI IDL YA + + VPE++D+ + L D+DE + +SL+G
Sbjct: 152 TELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDEQTVRSLNG 211
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 212 CRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARLCQLYPNA 271
Query: 309 SLNTLVANFFKTYAYWPWPTPVML----QD----PMLPAAGYPSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML +D P+ P + MPI P P
Sbjct: 272 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITPAYPCM 331
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ ++ W LFEP+ + + Y ++++ + A++
Sbjct: 332 NSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQIDIIAAD 391
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
DDL W GWV+SR R L LK+E + G+ C P P EYID PH F+ GLQ
Sbjct: 392 ADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAFFMGLQ 447
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 234/407 (57%), Gaps = 11/407 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D +R+ L + + GL S +E +R V+ KL +IV WVK++ QR + + E
Sbjct: 24 EADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGYTDQMVEE 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH +L +V+E+ V D
Sbjct: 84 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPD 143
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R I+
Sbjct: 144 AHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQII 203
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+ E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 204 RLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 263
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ + W WP PVML G+ P + MPI P P N++
Sbjct: 264 FFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVST 323
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + +F G+ +++ W LFEPF + + Y +++V + A + +DL W
Sbjct: 324 STLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWK 383
Query: 429 GWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 384 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 430
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 234/407 (57%), Gaps = 11/407 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D +R+ L + + GL S +E +R V+ KL +IV WVK++ QR + + E
Sbjct: 24 EADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGYTDQMVEE 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH +L +V+E+ V D
Sbjct: 84 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPD 143
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R I+
Sbjct: 144 AHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQII 203
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+ E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 204 RLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 263
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ + W WP PVML G+ P + MPI P P N++
Sbjct: 264 FFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVST 323
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + +F G+ +++ W LFEPF + + Y +++V + A + +DL W
Sbjct: 324 STLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWK 383
Query: 429 GWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 384 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 430
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 234/407 (57%), Gaps = 11/407 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D +R+ L + + GL S +E +R V+ KL +IV WVK++ QR + + E
Sbjct: 24 EADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGYTDQMVEE 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH +L +V+E+ V D
Sbjct: 84 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPD 143
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R I+
Sbjct: 144 AHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQII 203
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+ E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 204 RLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 263
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ + W WP PVML G+ P + MPI P P N++
Sbjct: 264 FFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVST 323
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + +F G+ +++ W LFEPF + + Y +++V + A + +DL W
Sbjct: 324 STLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWK 383
Query: 429 GWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 384 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 430
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 234/407 (57%), Gaps = 11/407 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D +R+ L + + GL S +E +R V+ KL +IV WVK++ QR + + E
Sbjct: 24 EADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGYTDQMVEE 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH +L +V+E+ V D
Sbjct: 84 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPD 143
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R I+
Sbjct: 144 AHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQII 203
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+ E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 204 RLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 263
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ + W WP PVML G+ P + MPI P P N++
Sbjct: 264 FFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVST 323
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + +F G+ +++ W LFEPF + + Y +++V + A + +DL W
Sbjct: 324 STLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWK 383
Query: 429 GWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 384 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 430
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 162/408 (39%), Positives = 236/408 (57%), Gaps = 12/408 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D ++ L + + GL S +E R V+ +L +IV WVK ++ + ++ + E
Sbjct: 29 EEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIVKIWVKTISRAKGFNEQLVQE 88
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A I T+GSY LGVHG +DID LC+GP AT EDFF L ML EV+E+H V D
Sbjct: 89 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEMEEVTELHPVPD 148
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF+G+ +DL YA L + +PE++D+ L+++DE + SL+G R +L
Sbjct: 149 AHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVLSLNGCRVTDQVL 208
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+++ F+ LR ++ WAKRRGVY N+ GFLGG++LA+LV +CQ +P N LV+
Sbjct: 209 RLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGRICQLYPNALPNMLVSR 268
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ Y W WP PVML + G P + LMPI P P N+T
Sbjct: 269 FFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNSTYNVTT 328
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF RG + DW LFEP+P+ + Y ++++ ++A N DDL W
Sbjct: 329 STLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDDLRQWK 388
Query: 429 GWVKSRFRSLILKLEE-VQGL--CDPNPTEYIDVDVTEPHIVFYWGLQ 473
GWV+SR R L LK+E+ G+ C P P E+ D + H ++ GLQ
Sbjct: 389 GWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSF-HQCYFMGLQ 435
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/430 (39%), Positives = 234/430 (54%), Gaps = 98/430 (22%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
+PS + ++D+ RS SLVQ + +EG VPS E+E KR VI++LK+IV+ W VA+++ +P
Sbjct: 76 DPSFVAEVDQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKIVMHWANAVAYEQSVP 135
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ AT+LTYGSY LG HG ESDID LC+GP AT+ FFVVL +L+ RPEVSE
Sbjct: 136 Q---GLATATVLTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLRQLLEGRPEVSE 192
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+ ++ AKVPLMRF+F GI +D YA L V+
Sbjct: 193 LQTIEKAKVPLMRFRFTGIAVDFTYAQLPVIDA--------------------------- 225
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
L+KFQ +LRCIKLWA++RG++ + GF G+HLAIL A+VC+ P S+
Sbjct: 226 -----------LKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASV 274
Query: 311 NTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
N L A FF +T + P ++P
Sbjct: 275 NGLFAVFF--------------------------QTFAHWPWQVP--------------- 293
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
D +R DF W +LFEPFPY KKY +F+R+ L A +L DW GW
Sbjct: 294 ----------------DSLRHDFQWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGW 337
Query: 431 VKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFL 490
VKSRFR LILKLE CDP P+E +D +P++VFYWGL P R +D ++++DF+
Sbjct: 338 VKSRFRLLILKLERAGIECDPCPSEEVDHTDNDPNVVFYWGLIPERIIQVDTSSLKEDFM 397
Query: 491 KNIHNGFQGS 500
++I N G+
Sbjct: 398 ESITNDVYGT 407
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/417 (39%), Positives = 238/417 (57%), Gaps = 11/417 (2%)
Query: 67 NFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQ 126
N PL+ + D +R+ L + + GL S E +R V+ +L +IV WVK++ Q
Sbjct: 5 NKPLSLAGPVDADIQRTAELNKFLVEAGLYESAHESARREEVLGELDKIVKDWVKQLTSQ 64
Query: 127 RRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
R + + + +A + T+GSY LGVHG +D+D LC+GP + EDFF+VLH++L
Sbjct: 65 RGYTDQMVEDANAVLFTFGSYRLGVHGPGADVDTLCVGPSYVNREEDFFIVLHDILAQTE 124
Query: 187 EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSL 246
EV+E+ V DA VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL
Sbjct: 125 EVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDEATVRSL 184
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP 306
+G R IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P
Sbjct: 185 NGCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 244
Query: 307 KGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSP 358
+ LV+ FF+ + W WP PVML G+ P + MPI P P
Sbjct: 245 NAVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYP 304
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
N++ ST + +F G+ +++ +W LFE F + + Y +++V + A
Sbjct: 305 CMNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQFFEAYKNYLQVDIIA 364
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGL 472
+ +DL W GWV+SR R L LK+E + G C P P EY D H F+ GL
Sbjct: 365 EDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGL 421
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 241/423 (56%), Gaps = 20/423 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D +RSL L + S EE KR V+ +L +IV WVK++ R
Sbjct: 24 PISVAGPTEVDIQRSLELEK---------SKEEAIKRAEVLDRLGQIVKDWVKQLTRLRG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A + T+GSY LGVHG +DID LC+GP + + EDFF +LHN+L EV
Sbjct: 75 YTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEV 134
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKFDGI IDL YA + +L VPE++D+ + L ++DE + +SL+G
Sbjct: 135 TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNG 194
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P
Sbjct: 195 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 254
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML G+ P + MPI P P
Sbjct: 255 VPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCM 314
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ + + W LFEP+ + + Y +++V + A +
Sbjct: 315 NSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVD 374
Query: 421 QDDLGDWVGWVKSRFRSLILKLEE---VQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRT 477
DDL W GWV+SR R L L +E + C P P EY+D H F+ GLQ +
Sbjct: 375 IDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQG 434
Query: 478 NLL 480
++
Sbjct: 435 EII 437
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/408 (39%), Positives = 237/408 (58%), Gaps = 13/408 (3%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D ++ L + + + GL S EE +R V+ L +IV W+K ++ + L + + E
Sbjct: 24 EFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRAKGLNDQLLHE 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A I T+GSY LGVHG +DID LC+GP AT DFF L ML PEV+E+H V D
Sbjct: 84 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMPEVTELHPVPD 143
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VPLM FK +G+ IDL YA L + +PE++D+ L++ DE + +SL+G R IL
Sbjct: 144 AHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTVRSLNGCRVTDQIL 203
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P N LV+
Sbjct: 204 RLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNILVSR 263
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ + W WP + L P + G P + +MPI P P N++
Sbjct: 264 FFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSSYNVSE 323
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST ++ EF RG+ + DW LFEPF + + Y ++++ +SA+N DDL W
Sbjct: 324 STLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISAANVDDLRKWK 383
Query: 429 GWVKSRFRSLILKLEEVQGL--CDPNPTEYIDVDVTEP-HIVFYWGLQ 473
GWV+SR R L LK+E + C P+P ++ D + P H ++ GLQ
Sbjct: 384 GWVESRLRQLTLKIERHFKMLHCHPHPHDF--QDTSRPLHCSYFMGLQ 429
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 172/449 (38%), Positives = 251/449 (55%), Gaps = 17/449 (3%)
Query: 62 LVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVK 121
+VP + PL+ ++ D ++ L + + GL EE KR V++++ +IV WVK
Sbjct: 13 VVPEADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVK 72
Query: 122 RVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
+V Q+ ++ + E +A + T+GSY LGVHG +DIDALC+GP + E+FFV+L+
Sbjct: 73 KVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGA 132
Query: 182 LKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDET 241
L EV+E+ V DA VP+M+FKF G+ IDL YA + + +P + D+ L D+DE
Sbjct: 133 LSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEA 192
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+ +SL+G R IL+LVP+ E F+ LRC+K WA+RRGVY N+ G LGGV A+LVA V
Sbjct: 193 TVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARV 252
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVML----QDPMLPAAGY-----PSETRSLMPI 352
CQ +P + LV+ FF+ + W WP PVML D L A + P + +MPI
Sbjct: 253 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPI 312
Query: 353 RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV 412
P P N++ ST I +F G+ +++ W LFEPF + + Y R++
Sbjct: 313 ITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYL 372
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFY 469
V + A + DDL W GW++SR R L LK+E + +G+ C PNP EY D + H FY
Sbjct: 373 VVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFY 432
Query: 470 WGLQPG-----RTNLLDIVAVEKDFLKNI 493
GL R DI +F+ I
Sbjct: 433 MGLSRKEGMKIRGQKFDIRGTVDEFMHEI 461
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/442 (38%), Positives = 247/442 (55%), Gaps = 17/442 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ ++ D ++ L + + GL EE KR V++++ +IV WVK+V Q+
Sbjct: 28 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 87
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A + T+GSY LGVHG +DIDALC+GP + E+FFV+L+ L EV
Sbjct: 88 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 147
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF G+ IDL YA + + +P + D+ L D+DE + +SL+G
Sbjct: 148 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 207
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ E F+ LRC+K WA+RRGVY N+ G LGGV A+LVA VCQ +P
Sbjct: 208 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 267
Query: 309 SLNTLVANFFKTYAYWPWPTPVML----QDPMLPAAGY-----PSETRSLMPIRLPCSPH 359
+ LV+ FF+ + W WP PVML D L A + P + +MPI P P
Sbjct: 268 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 327
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N++ ST I +F G+ +++ W LFEPF + + Y R++ V + A
Sbjct: 328 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVAD 387
Query: 420 NQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQPG- 475
+ DDL W GW++SR R L LK+E + +G+ C PNP EY D + H FY GL
Sbjct: 388 DDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 447
Query: 476 ----RTNLLDIVAVEKDFLKNI 493
R DI +F+ I
Sbjct: 448 GMKIRGQKFDIRGTVDEFMHEI 469
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/442 (38%), Positives = 246/442 (55%), Gaps = 17/442 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ ++ D ++ L + + GL EE KR V++++ +IV WVK+V Q+
Sbjct: 27 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 86
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A + T+GSY LGVHG +DIDALC+GP + E+FFV L+ L EV
Sbjct: 87 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEV 146
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+M+FKF G+ IDL YA + + +P + D+ L D+DE + +SL+G
Sbjct: 147 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 206
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ E F+ LRC+K WA+RRGVY N+ G LGGV A+LVA VCQ +P
Sbjct: 207 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 266
Query: 309 SLNTLVANFFKTYAYWPWPTPVML----QDPMLPAAGY-----PSETRSLMPIRLPCSPH 359
+ LV+ FF+ + W WP PVML D L A + P + +MPI P P
Sbjct: 267 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 326
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N++ ST I +F G+ +++ W LFEPF + + Y R++ V + A
Sbjct: 327 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVAD 386
Query: 420 NQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQPG- 475
+ DDL W GW++SR R L LK+E + +G+ C PNP EY D + H FY GL
Sbjct: 387 DDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 446
Query: 476 ----RTNLLDIVAVEKDFLKNI 493
R DI +F+ I
Sbjct: 447 GMKIRGQKFDIRGTVDEFMHEI 468
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/416 (39%), Positives = 241/416 (57%), Gaps = 11/416 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D +R+ L + + GL S +E KR V+ +L EIV +WVK++ R
Sbjct: 19 PISMAGPSATDLQRTRELEKFLAASGLYESKDEAAKREEVLHRLGEIVKSWVKQLTRLRG 78
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + +A ILT+GSY LGVHG +D+D LC+GP + T EDFF LH++L + EV
Sbjct: 79 YTGQMVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTREEDFFYTLHDILANVEEV 138
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ + DA VP+M+FKFDGI IDL YA + L +PE++D+ + L ++DE + +SL+G
Sbjct: 139 TELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDISDVSVLHNVDEPTVRSLNG 198
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRC+K WAKRRG+Y N+ GFLGGV+LA+LVA VCQ +P
Sbjct: 199 CRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPNA 258
Query: 309 SLNTLVANFFKTYAYWPWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WPTPVM L P+ P + MPI P P
Sbjct: 259 VPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITPAYPCM 318
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ ++ W LFE + + + Y +++V + A++
Sbjct: 319 NSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYSFFESYKNYLQVDVVAAD 378
Query: 421 QDDLGDWVGWVKSRFRSLILKLEE---VQGLCDPNPTEYIDVDVTEPHIVFYWGLQ 473
DDL W GWV+SR R L L +E + C P E++D H F+ GLQ
Sbjct: 379 ADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCAFFMGLQ 434
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 241/446 (54%), Gaps = 43/446 (9%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D ++ L + + + GL + +E R V+ +L +IV WVK + +
Sbjct: 22 PISLSGPTEYDVAKTRELEKYLQDAGLYENQDEAICREEVLGRLDQIVKIWVKTICRAKG 81
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A I T+GSY LGVHG +DID LC+GP AT EDFF LH ML PEV
Sbjct: 82 FNEQLVKEANAMIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKMLSEMPEV 141
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V DA VP+M FKF+G+ +DL YA L + +PE++D+ L+ DE + +SL+G
Sbjct: 142 TELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVRSLNG 201
Query: 249 VRANKCILQLVPDLE-----------------------------KFQPVLRCIKLWAKRR 279
R IL LVP+++ F+ LRC+KLWAK R
Sbjct: 202 CRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRCVKLWAKCR 261
Query: 280 GVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPA 339
GVY N+ GFLGG++ A+LV +CQ +P N LV+ FF+ Y W WP PVML +
Sbjct: 262 GVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTIKEGS 321
Query: 340 AGY--------PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRP 391
G P + LMPI P P N++ ST + EF RG +
Sbjct: 322 LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEAMEAN 381
Query: 392 DFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE-VQGL-- 448
DW LFEP+P+ + Y ++R+ +SA N DDL +W GWVKSR R L LK+E G+
Sbjct: 382 KADWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLKIERNTYGMLQ 441
Query: 449 CDPNPTEYIDVDVTEP-HIVFYWGLQ 473
C P+P ++ D + P H ++ GLQ
Sbjct: 442 CHPHPGDF--SDKSRPLHCSYFMGLQ 465
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 250/452 (55%), Gaps = 25/452 (5%)
Query: 54 VPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLK 113
+P N V P++ + D +R+ L + + + GL S EE KR V+ ++
Sbjct: 16 LPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIG 75
Query: 114 EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAED 173
+IV WVK++ + + + + +A I T+GSY LGVHG +DID LC+GP + ED
Sbjct: 76 QIVKDWVKQLTRIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 135
Query: 174 FFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPF 233
FF +LHN+L+ EVSE+ V DA VP+M+FKFDGI IDL YA + L VPE++D+ +
Sbjct: 136 FFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVS 195
Query: 234 FLRDLDETSWKSLSGVRANKCILQLVPDLEKFQ------PV--------LRCIKLWAKRR 279
L ++DE + +SL+G R IL+LVP + PV LRC+K WAKRR
Sbjct: 196 VLYNVDEPTVRSLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAKRR 255
Query: 280 GVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPM 336
GVY N+ GFLGGV+ A+LVA VCQ +P + L++ FF+ Y W WP PVML ++
Sbjct: 256 GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDD 315
Query: 337 LPAAGY-----PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRP 391
L + + P + MPI P P N++ ST + +F G+ ++
Sbjct: 316 LGCSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELN 375
Query: 392 DFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE---EVQGL 448
W LFEP+ + + Y +++V + A++ DDL W GWV+SRFR L L +E E +
Sbjct: 376 KAQWSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQ 435
Query: 449 CDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLL 480
C P P EY+D H F+ GLQ + ++
Sbjct: 436 CHPYPHEYVDTSKPCAHCAFFMGLQRKQGEII 467
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/432 (38%), Positives = 241/432 (55%), Gaps = 17/432 (3%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D ++ L + + GL EE KR V++++ +IV WVK+V Q+ ++ + E +
Sbjct: 6 DLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYSEQMVKEAN 65
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A + T+GSY LGVHG +DIDALC+GP + E+FFV L+ L EV+E+ V DA
Sbjct: 66 AVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQPVPDAH 125
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M+FKF G+ IDL YA + + +P + D+ L D+DE + +SL+G R IL+L
Sbjct: 126 VPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRL 185
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+ E F+ LRC+K WA+RRGVY N+ G LGGV A+LVA VCQ +P + LV+ FF
Sbjct: 186 VPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFF 245
Query: 319 KTYAYWPWPTPVML----QDPMLPAAGY-----PSETRSLMPIRLPCSPHEYCHSNITRS 369
+ + W WP PVML D L A + P + +MPI P P N++ S
Sbjct: 246 RVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTS 305
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T I +F G+ +++ W LFEPF + + Y R++ V + A + DDL W G
Sbjct: 306 TLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDDDLRLWKG 365
Query: 430 WVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQPG-----RTNLLD 481
W++SR R L LK+E + +G+ C PNP EY D + H FY GL R D
Sbjct: 366 WIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKIRGQKFD 425
Query: 482 IVAVEKDFLKNI 493
I +F+ I
Sbjct: 426 IRGTVDEFMHEI 437
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 235/406 (57%), Gaps = 11/406 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + GL S EE KR V+ +L EIV WVK++ R + + + +
Sbjct: 29 DLQRTRELEKFLAVSGLYESKEEAAKREEVLHRLGEIVKNWVKQLTRLRGYTDQMVEDAN 88
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A ILT+GSY LGVHG +D+D LC+GP + EDFF LH++L + EV+E+ + DA
Sbjct: 89 AVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILANIEEVTELQPIPDAH 148
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M+FKFDGI IDL YA + L VPE++D+ + L ++DE + +SL+G R IL+L
Sbjct: 149 VPVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKL 208
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WAKRRG+Y N+ GFLGGV+LA+LVA VCQ +PK + LV+ FF
Sbjct: 209 VPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPKAVPSMLVSRFF 268
Query: 319 KTYAYWPWPTPVML-----QDPMLPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
+ Y W WPTPVML D P P + MPI P P N++ ST
Sbjct: 269 RVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITPAYPCMNSSYNVSMST 328
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ +F G+ ++ W LFE + + + Y +++V + A++ DDL W GW
Sbjct: 329 LRVMMEQFQYGNKICGEIELSKDCWKALFEKYSFFESYKNYLQVDVVAADADDLRSWKGW 388
Query: 431 VKSRFRSLILKLEE---VQGLCDPNPTEYIDVDVTEPHIVFYWGLQ 473
V+SR R L L +E + C P E++D H F+ GL
Sbjct: 389 VESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFMGLH 434
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 236/411 (57%), Gaps = 18/411 (4%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D ++ L + + + GL S EE +R V+ L +IV W+K ++ + L E +
Sbjct: 24 ELDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRTKGLNDELLHL 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A I T+GSY LGVHG +DID LC+GP AT DFF L ML PEV+E+H V D
Sbjct: 84 ANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMPEVTELHPVPD 143
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VPLM FK +G+ IDL YA L + +PE++D+ L++ DE + +SL+G R IL
Sbjct: 144 AHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 203
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P N L +
Sbjct: 204 RLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNMLASR 263
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITR 368
FF+ Y W WP PV+L + G P + +MPI P P N++
Sbjct: 264 FFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPIITPAYPCMNSSYNVSA 323
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF RG + DW LFEPF + + Y ++++ +SA+N +DL W
Sbjct: 324 STLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAFFEAYKNYLQIDISAANVNDLRKWK 383
Query: 429 GWVKSRFRSLILKLEE-----VQGLCDPNPTEYIDVDVTEP-HIVFYWGLQ 473
GWV+SR R L LK+E +Q C P+P ++ D + P H ++ GLQ
Sbjct: 384 GWVESRLRQLTLKIERHTYDMLQ--CHPHPHDF--QDASRPLHCSYFMGLQ 430
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 245/443 (55%), Gaps = 20/443 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D ++ + + + + GL S EE R V+ KL + V W+K+
Sbjct: 35 PISLSGPTEKDVMQTTEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKATRASG 94
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A I T+GSY LGVHG +DID LC+GP AT + FF LH+ML PEV
Sbjct: 95 YGEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAEMPEV 154
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
SE+H V DA VP++ FK G+ IDL YA L + +PE++D+ L ++DE + +SL+G
Sbjct: 155 SELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSILHNVDEQAVRSLNG 214
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR ++ W KRRGVY N+ GFLGG++ AILVA +CQ +P
Sbjct: 215 CRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQLYPNA 274
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
S + L++ FF+ Y+ W WP PV L G P + MPI P P
Sbjct: 275 SPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCM 334
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST Y + EF RG+ + + W LFEP+P+ + Y ++ V +SA N
Sbjct: 335 NSSYNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPFFELYRNYLEVVISARN 394
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL---- 472
+DDL +W GWV+SR R+L+LK E L P+P ++ D + P H ++ GL
Sbjct: 395 EDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDF--SDGSRPLHSFYFMGLWRKQ 452
Query: 473 --QPGRTNLLDIVAVEKDFLKNI 493
QP DI + +F ++
Sbjct: 453 TVQPQEAEQFDIRGIVNEFKSSV 475
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 226/376 (60%), Gaps = 11/376 (2%)
Query: 109 IQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFA 168
+ +L E+V WVK ++ ++ L E + E I T+GSY LGVHG +DID LC+GP +
Sbjct: 52 LGRLDELVNVWVKSMSRKKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYV 111
Query: 169 TMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVD 228
T EDFFV LH++L+ V+E+H V DA VP+M F+F+GI IDL YA L + +PE +D
Sbjct: 112 TREEDFFVELHDLLQKTEGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELD 171
Query: 229 VLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGF 288
+L L+++DE S +SL+G R IL+LVP++E F+ LR +KLWAKRRGVY N+ GF
Sbjct: 172 ILQDTILQNVDEQSVRSLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGF 231
Query: 289 LGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD--------PMLPAA 340
LGGV+ A+LVA +CQ +P + L++ FF+ Y W WP PVML P+
Sbjct: 232 LGGVNWALLVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPR 291
Query: 341 GYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFE 400
P + LMPI P P + N++ ST + EF RG + L DW LFE
Sbjct: 292 RNPRDRSHLMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFE 351
Query: 401 PFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYI 457
P+P+ + Y ++++ +SA +++DL W GWV+SR R LILK+E + G C P+P+ +
Sbjct: 352 PYPFFESYKNYLQIDISAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFH 411
Query: 458 DVDVTEPHIVFYWGLQ 473
D F+ LQ
Sbjct: 412 DTSKRVQVCSFFVALQ 427
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/373 (42%), Positives = 222/373 (59%), Gaps = 11/373 (2%)
Query: 112 LKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMA 171
L E+V WVK V+ + L E + E I T+GSY LGVHG +DID LC+GP + T
Sbjct: 59 LDELVNVWVKMVSRMKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTRE 118
Query: 172 EDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLN 231
EDFFV LH++L+ V+E+H V DA VP+M F+F+GI IDL YA L + +PE +D+L
Sbjct: 119 EDFFVELHDLLQKTDGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQ 178
Query: 232 PFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGG 291
L+++DE S +SL+G R IL+LVP++E F+ LR +KLWAKRRGVY N+ GFLGG
Sbjct: 179 DSILQNVDEQSVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGG 238
Query: 292 VHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD--------PMLPAAGYP 343
V+ A+LVA +CQ +P + L++ FF+ Y W WP PVML P+ P
Sbjct: 239 VNWALLVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNP 298
Query: 344 SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP 403
+ LMPI P P + N++ ST + EF RG L DW LFEP+P
Sbjct: 299 RDRSHLMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYP 358
Query: 404 YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVD 460
+ + Y ++++ ++A +++DL W GWV+SR R LILK+E + G+ C P+P + D
Sbjct: 359 FFESYKNYLQIEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTS 418
Query: 461 VTEPHIVFYWGLQ 473
F+ LQ
Sbjct: 419 KKVQVCSFFVALQ 431
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 245/443 (55%), Gaps = 20/443 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D ++ + + +++ GL +E R V+ KL + V AW+K+
Sbjct: 16 PISLSGPTEKDLMQTAEVEKYLSDAGLYERQDEAILREEVLGKLDQTVKAWIKKATRISG 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A I T+GSY LGVHG +DID LC+GP AT E FF LH++L PEV
Sbjct: 76 YGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDILAEMPEV 135
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
SE+H V DA VP++ FK +G+ IDL YA L +PE++D+ L ++DE + +SL+G
Sbjct: 136 SELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDEQTVRSLNG 195
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR I+ W KRRGVY N+ GFLGG++ AILV +CQ +P
Sbjct: 196 CRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGRICQLYPNA 255
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
S + L++ FF+ Y+ W WP PVML G P + MPI P P
Sbjct: 256 SPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCM 315
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST Y + EF + + + DW LFEP+P+ + Y ++ V ++A N
Sbjct: 316 NSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNITARN 375
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL---- 472
+DDL +W GWV+SR R+L+LK+E L P P ++ D + P HI ++ GL
Sbjct: 376 EDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDF--SDKSRPLHIFYFMGLWRKQ 433
Query: 473 --QPGRTNLLDIVAVEKDFLKNI 493
Q T DI + +F I
Sbjct: 434 TTQAQETEQFDIRGIVNEFKNTI 456
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 242/443 (54%), Gaps = 20/443 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S D ++ + + +++ GL S +E R V+ KL + V AW+K+
Sbjct: 16 PISLSGPTDKDLMQTTEVEKYLSDAGLYESQDEAVLREEVLGKLDQTVKAWIKKATRISG 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ + E +A I T+GSY LGVHG +DID LC+GP AT E FF LH+ML PEV
Sbjct: 76 YGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDMLAEMPEV 135
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
SE+H V DA VP++ FK +G+ IDL YA L +PE++D+ L ++DE + +SL+G
Sbjct: 136 SELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILNNVDEQTVRSLNG 195
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR I+ W KRRGVY N+ GFLGG++ AILV +CQ +P
Sbjct: 196 CRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAILVGRICQLYPNA 255
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
S + L++ FF+ Y+ W WP PVML G P + MPI P P
Sbjct: 256 SPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCM 315
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST Y + EF R + + DW LFEP+P+ + Y ++ V ++A N
Sbjct: 316 NSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNITARN 375
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL---- 472
+D+L W GWV+SR R+L+LK+E L P P ++ D + P H ++ GL
Sbjct: 376 EDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDF--SDKSRPLHCFYFMGLWRKQ 433
Query: 473 --QPGRTNLLDIVAVEKDFLKNI 493
Q DI + +F I
Sbjct: 434 TTQTQEAEQFDIRGIVNEFKNTI 456
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 242/439 (55%), Gaps = 20/439 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + D ++ + + + + GL S EE R V+ KL + V W+K+
Sbjct: 14 PISLSGPTEKDVVQTAEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKATRVSG 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E +A I T+GSY LGVHG +DID LC+GP AT + FF LH+ML PEV
Sbjct: 74 YGDQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAEMPEV 133
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
SE+H V DA VP++ FK G+ IDL YA L + +P+++D+ L ++DE + +SL+G
Sbjct: 134 SELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSILHNVDEQAVRSLNG 193
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LR ++ W KRRGVY N+ GFLGG++ AILVA +CQ +P
Sbjct: 194 CRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQLYPNA 253
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
S + L++ FF+ Y+ W WP PV L G P + MPI P P
Sbjct: 254 SPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCM 313
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST Y + EF RG+ + + W LFEP+P+ + Y ++ V ++A +
Sbjct: 314 NSSYNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPFFELYKNYLEVGITARS 373
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTEP-HIVFYWGL---- 472
+DDL +W GWV+SR R+L+LK E L P+P ++ D + P H ++ GL
Sbjct: 374 EDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDF--SDGSRPLHSFYFMGLWRKQ 431
Query: 473 --QPGRTNLLDIVAVEKDF 489
QP DI + +F
Sbjct: 432 TAQPQEAEQFDIRGIVNEF 450
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 206/351 (58%), Gaps = 11/351 (3%)
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
+ + +A ILT+GSY LGVHG +D+D LC+GP + EDFF H++L S EV+E+
Sbjct: 2 VEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQP 61
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
V DA VP+M+FKFDGI IDL YA + L VPE +D+ + L ++DE + +SL+G R
Sbjct: 62 VPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVAD 121
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + L
Sbjct: 122 QILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSML 181
Query: 314 VANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSN 365
V+ FF+ Y W WP PVML G+ P + LMPI P P N
Sbjct: 182 VSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSYN 241
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
++ ST + +F G+ D+ W LF P+ + + Y F+++ + A++ DDL
Sbjct: 242 VSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDDLR 301
Query: 426 DWVGWVKSRFRSLILKLEE--VQGL-CDPNPTEYIDVDVTEPHIVFYWGLQ 473
W GWV+SR R L L +E + L C P P EYID H F+ GLQ
Sbjct: 302 AWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQ 352
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 226/384 (58%), Gaps = 8/384 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + +D + S L + + L S EE KR ++ KL +IV W K+V+ ++
Sbjct: 58 PISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWAKQVSLKKG 117
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
P++ +E A I T+GSY LGVHG SDID LC+GP+ M DFF L ++LK PE+
Sbjct: 118 YPEQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHI-MRSDFFDDLSDILKVHPEI 176
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENV-DVLNPFFLRDLDETSWKSLS 247
+E VKDA VP++ F GI IDL YA L + ++PE + D+++ FL+++DE S SL+
Sbjct: 177 TEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSILSLN 236
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP++ F+ LRCIKLWA RRG+Y N+ GFLGGV A+L A +CQ +P
Sbjct: 237 GCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQLYPN 296
Query: 308 GSLNTLVANFFKTYAYWPWPTPVML---QDPML--PAAGYPSETRS-LMPIRLPCSPHEY 361
+ +T++ FFK Y W WP P++L Q+ + P P ++ LMPI P P
Sbjct: 297 SAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKRDKAHLMPIITPAYPSMN 356
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ 421
N+++ST +++EF+RG TR + + W L E + +Y+ ++ + + N+
Sbjct: 357 STYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFYIEIDCYSMNE 416
Query: 422 DDLGDWVGWVKSRFRSLILKLEEV 445
+D W GW++S+ R LI LE
Sbjct: 417 EDSRKWEGWIESKLRFLISNLEST 440
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 228/402 (56%), Gaps = 19/402 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E + L +++ G+ S +E R V++ L+ IV WVK++ + P + E
Sbjct: 26 DLEATAELEKVLREAGMYESPQESAVRAEVLRDLQGIVDRWVKQLTLKHGYPDAMVDEAT 85
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE-VSEIHCVKDA 197
A +L +GSY LGVHG SDIDAL +GP F +DFF VL L E V+++ V A
Sbjct: 86 ALLLPFGSYRLGVHGGGSDIDALVVGPSFVDRDQDFFGVLAGALAEATEAVTDLQPVPGA 145
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+M+ +F G+ +DL YA +++ VP ++D+ + LR LD + +S++GVR IL+
Sbjct: 146 HVPVMKLRFRGVQVDLVYASVNLPVVPRDLDLSDRAVLRGLDHVTARSMNGVRVADEILR 205
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVPD F+ LRC+KLWAK RGVY N+ GFLGGV AILVA VCQ +P + + LV+ F
Sbjct: 206 LVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGVAWAILVARVCQLYPNAAPSMLVSRF 265
Query: 318 FKTYAYWPWPTPVMLQD---------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITR 368
FK + W WPTPVML D P+ P + LMP+ P P C N+++
Sbjct: 266 FKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRDRTHLMPVITPAYPCMNCTYNVSQ 325
Query: 369 STFYKIRTEFLRGHNTTRDLMR-PDFDWHFLFEPFPYSKKYARFVRVYLS-ASNQDDLGD 426
+T I+ + GH +++ D W LF+PFP+ + + +++V + A +++L +
Sbjct: 326 ATQRIIKEQIQAGHVACQEIAAGGDRGWGALFQPFPFFRTHKSYLQVDATVAGGEEELRE 385
Query: 427 WVGWVKSRFRSLILKLEE---VQGLCDPNPTEYIDVDVTEPH 465
W GWV+SR R L+ K+E + LC NP Y EPH
Sbjct: 386 WKGWVESRLRQLVAKVERDTFGELLCHQNPRAYD----AEPH 423
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 241/440 (54%), Gaps = 19/440 (4%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D ++++ L + + G+ + EE + R V++K+ E+ W+K V+ Q+ +P
Sbjct: 39 LDLQKTIELSEALVPHGVSETDEELNHRMEVLRKVNELAKEWIKEVSVQKNMPTSAADHV 98
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DIDALC+ P D+F ++LK +PEV+E+ V++A
Sbjct: 99 GGKIYTFGSYRLGVHNKGADIDALCVAPRHVDRV-DYFTSFVDLLKKQPEVTELRAVEEA 157
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ FDGI +D+ +A L + +P+N+D+ + L++LD +SL+G R IL+
Sbjct: 158 FVPVIKMNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNLDPKCVRSLNGCRVTDEILR 217
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP+++ F+ LR IKLWAK+ G+Y N+ G+LGGV A+LVA CQ +P + TLV F
Sbjct: 218 LVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLVARTCQLYPNAAAATLVQKF 277
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P YP S+ LMPI P P + N++ S
Sbjct: 278 FLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSCS 337
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T ++ EF +G N T ++M W LFEP + KY F+ + S+S+ +D +WVG
Sbjct: 338 TRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFFVKYKHFIVLIASSSSVEDQLEWVG 397
Query: 430 WVKSRFRSLILKLEEVQ--GLCDPNPTEYIDVDVTEPHIVFYW--GLQPGRTNLLDIVAV 485
V+S+ R LIL LE L NP +Y V I W GL +T L+I
Sbjct: 398 LVESKIRHLILALERNDHITLAHINPEQYDPVQPEPDTISTMWFIGLVFKKTESLNI--- 454
Query: 486 EKDFLKNIHNGFQGSPGRMG 505
D ++I F G R
Sbjct: 455 --DLTQDIQ-AFTGQVHRQA 471
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 232/443 (52%), Gaps = 53/443 (11%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D +R+ L +L+ + GL S +E KR V+ ++ +
Sbjct: 22 PISTAGPTEADIQRTRELEKLLGDSGLYESKDEAVKREEVLARIDQ-------------- 67
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
VHG +DID LC+GP + EDFF VLHN+L EV
Sbjct: 68 ----------------------VHGPGADIDTLCVGPSYVNREEDFFFVLHNILAEMEEV 105
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+MRFKFDGI IDL YA + +L VPE++D+ + L D+DE + +SL+G
Sbjct: 106 TELQPVPDAHVPVMRFKFDGISIDLLYASISLLVVPEDLDISDVSVLYDVDEPTVRSLNG 165
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA +CQ +P
Sbjct: 166 CRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNA 225
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ LV+ FF+ Y W WP PVML G+ P + MPI P P
Sbjct: 226 IPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPIITPAYPCM 285
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + +F G+ ++ W LFEP+ + + Y +++V + A++
Sbjct: 286 NSSYNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLFEPYLFFESYKNYLQVDIVATD 345
Query: 421 QDDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQPGRT 477
DDL W GWV+SR R L L ++ + G C P P EY+D H F+ GLQ +
Sbjct: 346 VDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQG 405
Query: 478 NLL------DIVAVEKDFLKNIH 494
++ DI +F +I+
Sbjct: 406 EMIQEGQQFDIRGTVDEFRNSIN 428
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 132/256 (51%), Positives = 188/256 (73%), Gaps = 3/256 (1%)
Query: 74 VLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQ 133
V+ MDE RS SL++ ++N G+ PS E+E +R V+++L +IV+ W +RVA+++ +Q
Sbjct: 64 VIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGKIVMDWARRVAYEQ---GKQ 120
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
T AT+LT+GSY LG +G ESDID LC+GP A++ FFVVL ML+ RPEVSE+H
Sbjct: 121 HWITSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHS 180
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
++ AKVPLMRFKF+GIL+D PY L V++ E + +P L ++D SW+ LSGVRAN+
Sbjct: 181 IEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANR 240
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
I+QLVP+++KFQ +LRC+KLWA++RG+ +L GF G+HLAIL A+VC+ HP S+NTL
Sbjct: 241 QIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTL 300
Query: 314 VANFFKTYAYWPWPTP 329
++ FF + +WPWP P
Sbjct: 301 LSLFFDIFVHWPWPLP 316
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 229/408 (56%), Gaps = 15/408 (3%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D +++ L + + GL S EE +R V+ +L +IV WVK++ QR + + E
Sbjct: 33 EVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGYTDQMVEE 92
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH++L EV+E+ V D
Sbjct: 93 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPD 152
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R IL
Sbjct: 153 AHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQIL 212
Query: 257 QLVPDLEKFQPVLR-CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
+LVP++E ++ C+ + + GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 213 RLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 269
Query: 316 NFFKTYAYWPWPTPVML----QD----PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNIT 367
FF+ + W WP PVML +D P+ Y + MPI P P N++
Sbjct: 270 RFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVS 329
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
ST + +F G+ +++ +W LFEPF + + Y +++V + A + +DL W
Sbjct: 330 TSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLW 389
Query: 428 VGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 390 KGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 437
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 229/408 (56%), Gaps = 15/408 (3%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D +++ L + + GL S EE +R V+ +L +IV WVK++ QR + + E
Sbjct: 33 EVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGYTDQMVEE 92
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+A + T+GSY LGVHG +DID LC+GP + EDFF+VLH++L EV+E+ V D
Sbjct: 93 ANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPD 152
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+M+FKF GI IDL YA + +L VP ++D+ L D+DE + +SL+G R IL
Sbjct: 153 AHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQIL 212
Query: 257 QLVPDLEKFQPVLR-CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
+LVP++E ++ C+ + + GFLGGV+ A+LVA VCQ +P + LV+
Sbjct: 213 RLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 269
Query: 316 NFFKTYAYWPWPTPVML----QD----PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNIT 367
FF+ + W WP PVML +D P+ Y + MPI P P N++
Sbjct: 270 RFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVS 329
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
ST + +F G+ +++ +W LFEPF + + Y +++V + A + +DL W
Sbjct: 330 TSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLW 389
Query: 428 VGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 390 KGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 437
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 222/401 (55%), Gaps = 18/401 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E + L +L+ G+ S EE R V++ L+ IV WVK++ + P + E
Sbjct: 22 DIEATAQLEKLLREAGMYESAEESAVRAEVLRDLQGIVDLWVKQLMLKHGYPDAMVDEAT 81
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A +L +GSY LGV G SDIDAL +GP F +DFF VL +L V+E+H V A
Sbjct: 82 AFVLPFGSYRLGVLGGGSDIDALVVGPSFVDRDQDFFGVLAGVLAETEAVTELHPVPGAH 141
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M+ +F G+ +DL YA +++ VP N+D+ + LR LD + +S++GVR I++L
Sbjct: 142 VPVMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDHVTARSMNGVRVADEIVRL 201
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VPD F+ LRC+KLWAK RGVY N+ GFLGGV AILVA VCQ +P + LV+ FF
Sbjct: 202 VPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVARVCQLYPNAVPSMLVSRFF 261
Query: 319 KTYAYWPWPTPVMLQD---------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
K +++W WP PVML D P+ + LMP+ P P C N++R+
Sbjct: 262 KVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAYPCMNCTYNVSRA 321
Query: 370 TFYKIRTEFLRGHNTTRDLMR-PDFDWHFLFEPFPYSKKYARFVRVYLS-ASNQDDLGDW 427
T I+ + G + + DW LF+P P+ + +++V + A ++L +W
Sbjct: 322 THRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSPFFSTHKSYLQVDAAVAGGAEELREW 381
Query: 428 VGWVKSRFRSLILKLEE---VQGLCDPNPTEYIDVDVTEPH 465
GWV+SR R L+ K+E + LC NP Y EPH
Sbjct: 382 KGWVESRLRQLVAKVERDTFGELLCHQNPRAYD----AEPH 418
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 199/337 (59%), Gaps = 18/337 (5%)
Query: 151 VHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGIL 210
VHG +DID LC+GP AT EDFF LH ML PEV+E+H V DA VP+MRFKF G+
Sbjct: 283 VHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVS 342
Query: 211 IDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 270
IDL YA L + +PE++DV L++ DE + +SL+G R IL+LVP+++ F+ LR
Sbjct: 343 IDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLR 402
Query: 271 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 330
++ WAKRRGVY N+ GFLGG++ A+LVA +CQ +P + LV+ FF+ Y W WP PV
Sbjct: 403 FMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPV 462
Query: 331 MLQDPMLPAAG--------YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
ML G YP + LMPI P P N++ ST + EF RG+
Sbjct: 463 MLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGN 522
Query: 383 NTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKL 442
+ + DW L EP+P+ + Y ++++ ++A N DDL W GWV+SR R L LK+
Sbjct: 523 EISEVMEANKADWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKI 582
Query: 443 EE-----VQGLCDPNPTEYIDVDVTEP-HIVFYWGLQ 473
E +Q C P+P ++ D + P H ++ GLQ
Sbjct: 583 ERHTYNMLQ--CHPHPGDF--SDKSRPFHCCYFMGLQ 615
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 76 DQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+++D ++ L + + GL S EE R V+ +L +IV WVK ++ + L ++ +
Sbjct: 28 NELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAKGLNEQLVQ 87
Query: 136 ETHATILTYGSYGLG-VHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCV 194
E +A I T+GSY LG + G + ++D L P + V E+ V
Sbjct: 88 EANAKIFTFGSYRLGAISGLKINLDKSKLMP----------------VGRVSNVEELTVV 131
Query: 195 KDAKVPLMRFKFDGILI 211
D KV ++ + G+L+
Sbjct: 132 IDCKVGVLPTTYLGLLL 148
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 224/386 (58%), Gaps = 18/386 (4%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
Q D S ++++++ E PS EE KR V+ KL I+ WVK+V ++ L +E ++
Sbjct: 14 QKDLTNSEAIMEILKKENRFPSDEENKKREEVLAKLDGIIKGWVKQVCLKQGLSEEFVSS 73
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ ++T+GS+ LGVHG +DID LC+ P F LH++LK RPE++E+ V D
Sbjct: 74 AGSKLVTFGSFRLGVHGPGADIDTLCIVPNMVE-KHHCFTDLHDILKLRPEIAELKPVPD 132
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VPL+ FDG+ IDL +A L +P ++D+L+ L+D D+ + +SL+G R IL
Sbjct: 133 AYVPLITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADDETQRSLNGPRVADQIL 192
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVP+ E F+ LRCIKLWA RR +YGN+ G+LGGV AIL A +CQ +P + +TL+
Sbjct: 193 KLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAKICQMYPNAAPSTLLTK 252
Query: 317 FFKTYAYWPW-PTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCH 363
FF Y W W PV+L+ +P L P + + LMPI P P
Sbjct: 253 FFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKL----NPRDKQHLMPIITPSYPCMNST 308
Query: 364 SNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDD 423
N++++T ++ EF RG + T+ +W LFE + +Y+ +++V ++ SN+ D
Sbjct: 309 FNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATDFFVRYSNYLQVEINTSNEVD 368
Query: 424 LGDWVGWVKSRFRSLILKLEEVQGLC 449
W+G+++S+ R LI KLE V GL
Sbjct: 369 HLKWIGFIQSKVRFLIPKLEAVPGLT 394
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 221/396 (55%), Gaps = 18/396 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E + L + + + GL S EE R +V+ +L+ IV WVKR+ QR P +++
Sbjct: 22 DLESTSRLEKHLRDAGLYESPEELAAREDVLCELRAIVDRWVKRLTAQRGYPDGMVSQAT 81
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKD 196
A +L +GSY LGVHG SDIDAL +GP + DFF VL +L + V+E+ V
Sbjct: 82 APVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDHDFFGVLGGVLSEMTDDAVTELQPVPG 141
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++ +F G+ +DL +A + + VPE++D+ + LR +D + +S++GVR IL
Sbjct: 142 AHVPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGMDLATVRSVNGVRVADEIL 201
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVPD F+ LRC+KLWAK RGVY N+ GF GGV AILVA VCQ +P + + LV+
Sbjct: 202 RLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILVAFVCQLYPNAAPSVLVSR 261
Query: 317 FFKTYAYWPWPTPVMLQDP----------MLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
FFK A W WP PV L+D + P + LMP+ P P N+
Sbjct: 262 FFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTPAYPCMNSCYNV 321
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS---NQDD 423
+ +T I + G+ + ++ W LFEPF + K+Y ++RV + + + D
Sbjct: 322 SHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPFHFFKEYKSYLRVDVKVAGGGGEGD 381
Query: 424 LGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEY 456
L +W GWV+SR R L++++E LC PNP Y
Sbjct: 382 LREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAY 417
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 233/424 (54%), Gaps = 40/424 (9%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+L + + L PS EE+ +R NV+ L +V+ WV+RVA +RL ++ + E A I T+
Sbjct: 31 TLEECLHANNLYPSREEQRQRLNVLGALNAVVVEWVRRVALAQRLSEDVVEEHGARIFTF 90
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFF-------------VVLHNMLKSRPEVSEI 191
GSY LGV+G +D+D LC+ P F FF VVL +ML+ E+
Sbjct: 91 GSYRLGVNGPGADVDTLCVVPRFVERNRYFFGLPDEQGSRAPTQVVLADMLRQDDRTEEL 150
Query: 192 HCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
V+ A VP+++ +F G+ +DL A + ++ +P+N ++L+ LR++D+ + +SL+GVR
Sbjct: 151 VTVESAYVPVIKIRFMGVDMDLLCAPIALMKIPKNFNILDDAVLRNVDDATQRSLNGVRV 210
Query: 252 NKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLN 311
IL+LVPD++ F+ LRCIK WAKRRG+Y N+ G+LGGV A+LVA VCQ +P +
Sbjct: 211 TDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGGVAWAMLVARVCQLYPNATAA 270
Query: 312 TLVANFFKTYAYWPWPTPVMLQDPML--PAAGY----------PSETRSLMPIRLPCSPH 359
+++ FF+ Y+ W WP PV L P++ AG P + R LMPI P P
Sbjct: 271 VVLSAFFRLYSQWQWPKPVKLC-PIIRHQHAGLRQLKVWDPTDPRDRRHLMPIITPAYPS 329
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPD---------FDWHFLFEPFPYSKKYAR 410
N+T ST + EF RG D++ DW L EP + +Y
Sbjct: 330 MNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVSPRDWERLLEPSDFFARYKH 389
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL-CDPNPTEYIDVDVTEPHIVFY 469
++++ ++A N DDL W G V+SR R L+ +LE + + P P + D + FY
Sbjct: 390 YLQIEITAGNMDDLKKWRGHVESRLRLLVQRLEVLPPVSVHPWP----EADERGTSVFFY 445
Query: 470 WGLQ 473
+GL+
Sbjct: 446 FGLR 449
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 214/390 (54%), Gaps = 11/390 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D + L + M G+ S +E + R V+ KL V W+ ++ + LP +
Sbjct: 34 EIDHIYTQKLTEAMKPFGVFESEDELNHRLAVLGKLNSFVKEWIAEISESKNLPLSAVVN 93
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
I T+GSY LGVH +DIDALC+ P DFF LK E+ ++ V+D
Sbjct: 94 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFFEKLKRLDEIKDLRAVED 152
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++FKFDGI IDL +A L + S+P+N+D+ LR+LD +SL+G R IL
Sbjct: 153 AFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEIL 212
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 213 YLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHK 272
Query: 317 FFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITR 368
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 273 FFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVST 332
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF G T ++++ DW LFEP + +KY ++ + SAS +++ +W+
Sbjct: 333 STRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASASTEENHLEWI 392
Query: 429 GWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
G V+S+ R L+ LE E L NP +
Sbjct: 393 GLVESKIRVLVGNLERNEYITLAHVNPQSF 422
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 214/390 (54%), Gaps = 11/390 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D + L + M G+ +E + R V+ KL V W+ ++ + LP +A
Sbjct: 34 EIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWISEISESKNLPPSAVAN 93
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
I T+GSY LGVH +DIDALC+ P DFF LK E+ ++ V+D
Sbjct: 94 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFFEKLKRHDEIKDLRAVED 152
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++FKFDGI IDL +A L + S+P+N+D+ LR+LD +SL+G R IL
Sbjct: 153 AFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEIL 212
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 213 YLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHK 272
Query: 317 FFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITR 368
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 273 FFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVST 332
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF G T ++++ DW LFEP + ++Y ++ + SAS +++ +W+
Sbjct: 333 STRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTASASTEENHLEWI 392
Query: 429 GWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
G V+S+ R L+ LE E L NP +
Sbjct: 393 GLVESKIRVLVGNLERNEYITLAHVNPQSF 422
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 217/390 (55%), Gaps = 11/390 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D E + L + M G+ EE + R V+ KL V W+ ++ + LP I+
Sbjct: 33 EIDHEYTRKLCEAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIAEISELKNLPPSAISC 92
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
I T+GSY LGVH +DIDALC+ P + DFF LK E+ ++ V+D
Sbjct: 93 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFQSFFEKLKQHEEIKDLRAVED 151
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++FKFDGI IDL +A L + S+P+N+D+ L++LD +SL+G R IL
Sbjct: 152 AFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTDEIL 211
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 212 YLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHK 271
Query: 317 FFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITR 368
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 272 FFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVST 331
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF G + T ++++ +W LFEP + +KY ++ + SAS +++ +WV
Sbjct: 332 STRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSFFQKYKHYIVLTASASTEENHLEWV 391
Query: 429 GWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
G V+S+ R L+ LE E L NP +
Sbjct: 392 GLVESKIRVLVGNLERNEYITLAHVNPQSF 421
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 213/390 (54%), Gaps = 11/390 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D + L + M G+ +E + R V+ KL V W+ ++ + LP +
Sbjct: 34 EIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWIAEISDSKNLPPSSVTN 93
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
I T+GSY LGVH +DIDALC+ P DFF LK E+ ++ V+D
Sbjct: 94 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHIERT-DFFSSFFEKLKRHDEIKDLRAVED 152
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++FKFDGI IDL +A L + S+P+N+D+ LR+LD +SL+G R IL
Sbjct: 153 AFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEIL 212
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 213 YLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHK 272
Query: 317 FFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITR 368
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 273 FFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVST 332
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF G T ++++ DW LFEP + +KY ++ + SAS +++ +W+
Sbjct: 333 STRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASASTEENHLEWI 392
Query: 429 GWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
G V+S+ R L+ LE E L NP +
Sbjct: 393 GLVESKIRVLVGNLERNEYITLAHVNPQSF 422
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 241/464 (51%), Gaps = 32/464 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S +D + S L + + L S EE KR V+ KL +IV W K+V+ ++
Sbjct: 51 PISTSPPSALDLKLSNDLENTLISFNLFESPEESRKREEVLGKLNQIVREWAKQVSIKKG 110
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
P++ AE A I T+GSY LGVHG SDID LC+GP+ M DFF L LK+ PE+
Sbjct: 111 YPEQTAAEVVAKIFTFGSYRLGVHGPNSDIDTLCVGPKHI-MRSDFFDDLSESLKTHPEI 169
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENV-DVLNPFFLRDLDETSWKSLS 247
+E VKDA VP++ F G+ IDL YA L + ++PE + D+++ +L+++DE S SL+
Sbjct: 170 TEFTTVKDAFVPVINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDEKSILSLN 229
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP++ F+ LRCIKLWA FLGG+ A+L A +CQ +P
Sbjct: 230 GCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITWALLTARICQLYPN 280
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAA------GYPSETRSLMPIRLPCSPHEY 361
+ +T++ FFK Y W WP PV+L + A + LMPI P P
Sbjct: 281 SAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAKRDKAHLMPILTPAYPMMN 340
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ 421
N+++ST ++ EF+RG TR + + ++ L E + +Y ++++ SA N+
Sbjct: 341 STYNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFFTRYRFYIQIDCSAGNE 400
Query: 422 DDLGDWVGWVKSRFRSLILKLEEVQGL--CDPNPTEYIDVDVTEPH-----IVFYWGL-- 472
+D W GW++S+ R LI LE + P P + ++ E H F+ GL
Sbjct: 401 EDHRKWEGWIESKLRFLISNLEMTPKMKYAVPFPKSFSNLIHKESHPDQICTTFFMGLVF 460
Query: 473 ----QPGRTNLLDIVAVEKDFLKNIHNGF--QGSPGRMGLLVVQ 510
PG +D+ +F I Q +P M + VQ
Sbjct: 461 NFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQ 504
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 21 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKN 80
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 81 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 139
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ EN+D+ + LR LD +SL+G
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNG 199
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 417
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ EN+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ EN+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 221/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L++ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 23 PISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISELSESKN 82
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 83 LPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 141
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ ++DA VP+++F+FDGI IDL +A L + +V +N+D+ + LR LD +SL+G
Sbjct: 142 RNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLNG 201
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 202 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 261
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 262 AASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 321
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 322 NSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 381
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 382 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 419
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPTNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 214/390 (54%), Gaps = 11/390 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D + L M G+ EE + R V+ KL V W+ ++ + LP I+
Sbjct: 31 EIDHHYTKKLCDAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIAEISELKNLPPSAISC 90
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
I T+GSY LGVH +DIDALC+ P DFF LK E+ ++ V+D
Sbjct: 91 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQSFFEKLKQHEEIKDLRAVED 149
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++FKFDGI IDL +A L + S+P+N+D+ L++LD +SL+G R IL
Sbjct: 150 AFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTDEIL 209
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 210 YLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHK 269
Query: 317 FFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITR 368
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 270 FFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVST 329
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF G + T ++++ +W LFEP + +KY ++ + SAS +++ +W+
Sbjct: 330 STRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIVLAASASTEENHLEWI 389
Query: 429 GWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
G V+S+ R L+ LE E L NP +
Sbjct: 390 GLVESKIRVLVGNLERNEYITLAHVNPQSF 419
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 21 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 80
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 81 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 139
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 199
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 417
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 221/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L++ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 38 PISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISELSESKN 97
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 98 LPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 156
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ ++DA VP+++F+FDGI IDL +A L + +V +N+D+ + LR LD +SL+G
Sbjct: 157 RNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLNG 216
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 217 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 276
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 277 AASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 337 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 396
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 397 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 434
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 21 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 80
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 81 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 139
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 199
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 417
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 211/383 (55%), Gaps = 14/383 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P PS L + DE L + + GL S EE R V+ K+ ++V W+ V+ ++
Sbjct: 50 PPKPSDLQRTDE-----LEETLRQFGLFESEEELAHRMEVLSKINQLVKKWIYEVSIKKN 104
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+P I T+GSY LGVH +DID LC+ P + DFF +L+ + EV
Sbjct: 105 MPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS-DFFASFVELLRQQEEV 163
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI +D+ +A L + +PE+ D+ + L++LD+ +SL+G
Sbjct: 164 KDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQKCVRSLNG 223
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR IKLWAKR GVY N+ G+LGGV A+LVA CQ +P
Sbjct: 224 CRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVARTCQLYPNA 283
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
+ TLV FF ++ WPWP PV+L+ P G+P ++ LMPI P P +
Sbjct: 284 AAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQ 343
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST +R EF +G T ++M DW LFEP + KY F+ + S +
Sbjct: 344 NSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQS 403
Query: 421 QDDLGDWVGWVKSRFRSLILKLE 443
++ +W G V+S+ R LI LE
Sbjct: 404 KEHHLEWYGLVESKIRILISNLE 426
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 211/383 (55%), Gaps = 14/383 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P PS L + DE L + + GL S EE R V+ K+ ++V W+ V+ ++
Sbjct: 101 PPKPSDLQRTDE-----LEETLRQFGLFESEEELAHRMEVLSKINQLVKKWIYEVSIKKN 155
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+P I T+GSY LGVH +DID LC+ P + DFF +L+ + EV
Sbjct: 156 MPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS-DFFASFVELLRQQEEV 214
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI +D+ +A L + +PE+ D+ + L++LD+ +SL+G
Sbjct: 215 KDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQKCVRSLNG 274
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR IKLWAKR GVY N+ G+LGGV A+LVA CQ +P
Sbjct: 275 CRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVARTCQLYPNA 334
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
+ TLV FF ++ WPWP PV+L+ P G+P ++ LMPI P P +
Sbjct: 335 AAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQ 394
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST +R EF +G T ++M DW LFEP + KY F+ + S +
Sbjct: 395 NSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQS 454
Query: 421 QDDLGDWVGWVKSRFRSLILKLE 443
++ +W G V+S+ R LI LE
Sbjct: 455 KEHHLEWYGLVESKIRILISNLE 477
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 21 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 80
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 81 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 139
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 199
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 417
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 45 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 104
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 105 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 163
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 164 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 223
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 224 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 283
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 284 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 343
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 344 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 403
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 404 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 441
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + V
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGV 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EEHQLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + +++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQD--------PMLPAAGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P+ PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 16 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKN 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 76 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 134
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 135 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 194
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 195 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 254
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 255 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 314
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 315 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 374
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 375 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 412
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTEKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + S+ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQSISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP P++ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ ++ +
Sbjct: 81 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKN 140
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 141 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 199
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 200 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 259
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 260 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 319
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 320 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 379
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 380 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 439
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 440 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 477
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELTHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+G
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ +W L EP + +KY ++ + SAS
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 216/378 (57%), Gaps = 12/378 (3%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D + S L + + L + EE K+ ++ KL IV WV V+ +R ++ E
Sbjct: 42 DLKLSTELEDTLKSFNLFETPEESGKKEEILGKLNLIVRKWVIDVSLKRGFTEQMSLEVV 101
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A I T+GSY LGV G SDID LC+ P+ M DFF L LK P+++E++ VKDA
Sbjct: 102 AKIFTFGSYRLGVSGPSSDIDTLCVAPKH-IMRSDFFDFLGEALKVHPDITELNMVKDAY 160
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENV-DVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP++ F GI IDL +A L + S+ E++ D+++ +L++LD+ S SL+G R IL
Sbjct: 161 VPVITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKNLDDQSITSLNGCRVTDKILT 220
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IKLWA+RRG+Y N+ GFLGGV A+L A +CQ +P + +T++ F
Sbjct: 221 LVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALLTARICQLYPNAAPSTIINRF 280
Query: 318 FKTYAYWPW----PTPVML---QDPMLPAAGYPSETRS---LMPIRLPCSPHEYCHSNIT 367
FK Y W W PTPV+L QD + AA ++ R LMPI P P N++
Sbjct: 281 FKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQKRDKSHLMPILTPAYPSMNSTYNVS 340
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
+ST ++ EF RG+ + L + +W+ L E + +Y ++++ SA N+++ W
Sbjct: 341 KSTLSLLKDEFARGNQIAQKLESGEANWNKLLEKSDFFSRYQFYLQIDCSAQNEEEHRKW 400
Query: 428 VGWVKSRFRSLILKLEEV 445
GW++S+ R LI LE+
Sbjct: 401 EGWIESKLRKLISFLEQT 418
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 210/373 (56%), Gaps = 11/373 (2%)
Query: 94 GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
G+ S +E + R ++ KL +V W+K V+ + +P+ I T+GSY LGVH
Sbjct: 59 GVFESEQELNHRMVILGKLYSLVKQWIKDVSISKNMPESVAENVGGKIYTFGSYRLGVHN 118
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
+DIDALC+ P + DFF + +LK +PEV+++ V++A VP+++ FDGI ID+
Sbjct: 119 RGADIDALCVAPRHIS-RNDFFGSFYELLKKQPEVTDLRAVEEAFVPVIKMNFDGIEIDM 177
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
+A L + +P+++D+ + L++LD+ +SL+G R IL+LVP+++ F+ LR IK
Sbjct: 178 LFARLLLKEIPDSMDLRDDLLLKNLDQKCVRSLNGCRVTDEILRLVPNVDNFRLALRAIK 237
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
LWAKR G+Y N G+LGGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 238 LWAKRHGIYSNALGYLGGVSWAMLVARTCQLYPNAAPATLVHKFFLVFSQWKWPQPVLLK 297
Query: 334 DPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
P G+ + LMPI P P + N++ ST I EF G T
Sbjct: 298 QPSNVNLGFAVWDPRVNIQDRYHLMPIITPAYPQQNSTFNVSGSTRQIIMEEFKLGLQLT 357
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
D+M W LFEP + KY F+ + +SA + +D +W G V+S+FR LI LE
Sbjct: 358 DDIMLSKQTWDKLFEPPLFFMKYKHFIVLLVSAESPEDHLEWCGLVESKFRLLIGTLERN 417
Query: 446 Q--GLCDPNPTEY 456
Q L NP +
Sbjct: 418 QHITLAHINPESF 430
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 205/369 (55%), Gaps = 11/369 (2%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
+ EE + R ++ KL +V WV+ V+ + +P+ + I T+GSY LGVH +D
Sbjct: 56 AEEELNHRMEILAKLNTLVKQWVRDVSISKNMPEAMAEKLGGKIYTFGSYRLGVHHKGAD 115
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P A D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 116 IDALCVAPRNIERA-DYFGSFFELLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFAR 174
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P+N D+ + L++LD+ S +SL+G R IL+LVP+++ F+ LR IKLWAK
Sbjct: 175 LALKEIPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAK 234
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPML 337
R G+Y N G+ GGV A+LVA CQ +P TLV FF ++ W WP PV+L+ P
Sbjct: 235 RHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDN 294
Query: 338 PAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
G+ + LMPI P P + N++ ST + EF RG T D+M
Sbjct: 295 VNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIM 354
Query: 390 RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ--G 447
W LFE + +Y F+ + +++SN DD +W G V+S+ R LI LE Q
Sbjct: 355 MGKQMWEKLFEAPSFFYRYRHFIVLLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHIN 414
Query: 448 LCDPNPTEY 456
L NP Y
Sbjct: 415 LAHVNPKCY 423
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 212/390 (54%), Gaps = 21/390 (5%)
Query: 82 RSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATI 141
++ L + + + GL + +E V+ +L +IV WVK ++ + L K+ + E +A I
Sbjct: 35 KTRELEKYLQDAGLYENQQE--AVXEVLGRLDQIVKIWVKIISRAKGLNKQLVQEANAKI 92
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
T+GSY LGVH ++ID LC+GP A+ EDFF LH ML PEV+E+H V DA VP+
Sbjct: 93 FTFGSYXLGVHSPGANIDTLCVGPRHASRDEDFFGDLHRMLSKMPEVTELHPVPDAHVPV 152
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
MRFKF+G+ IDL YA L + +PE++D+ L++ DE + SL+G R +L
Sbjct: 153 MRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADEETVCSLNGCRVTDKVL----- 207
Query: 262 LEKFQPVLRCIKLWAKRRGVYGN--LHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFK 319
L+ F LRC+K WAK GVY + +LGG++ A+LVA C P N LV+ FF+
Sbjct: 208 LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLVARTCXLFPNALPNMLVSRFFR 267
Query: 320 TYAYWPWPTPVMLQDPMLPAAG--------YPSETRSLMPIRLPCSPHEYCHSNITRSTF 371
Y W WP PVML + G YP++ LMPI P N++ T
Sbjct: 268 VYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIITPAYACMNSSYNVSSITL 327
Query: 372 YKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWV 431
+ EF RG+ + D W F + FP S Y ++++ +S N DDL W GWV
Sbjct: 328 CIMTEEFQRGNEICEYFAQDDLTWAFKLK-FPCSNSYKNYLQIDISGENADDLRKWKGWV 386
Query: 432 KSRFRSLILKLEE-VQGL--CDPNPTEYID 458
+S R L L++E + G+ C P+P + D
Sbjct: 387 ESHLRQLRLQIERHIYGMLQCHPHPGDSSD 416
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 243/479 (50%), Gaps = 33/479 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V D + + L + G+ + E + R V+ KL E+V W+ ++ ++
Sbjct: 15 PISTAVPKPQDIKLTNLLEACLQKYGVFDTPEGQKHRLLVLGKLNELVKKWIIDISKEKG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + E TI T+GSY LGVHG +DID L + P DFF +L V
Sbjct: 75 KSEAEAKEVGGTIFTFGSYRLGVHGKGADIDTLLVAPRHIERT-DFFSSFKELLFEAKNV 133
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ + V DA VP+++ +FDG+ +DL +A L + +P+ + +L+ L++LD +SL+G
Sbjct: 134 TNVRAVPDAFVPVIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDAKCVRSLNG 193
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ E F+ LR IKLWAKRRG+Y N G+LGGV A+LVA CQ +P
Sbjct: 194 CRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNA 253
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY----------PSETRSLMPIRLPCSP 358
+ +T+V FF + W WP PV+L+ G P + LMPI P P
Sbjct: 254 ASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIITPAYP 313
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
+ N+T+ST + EF RG + RD+ W LFEP + Y ++ + +A
Sbjct: 314 QQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEPIKFFSLYKHYIVICATA 373
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLEEVQG--LCDPNPTEY--IDVDVTEPHIVFYWGLQ- 473
+ D L W G V+S+ R LI KLE+ + + NPT Y I D T+ H++++ GL+
Sbjct: 374 IDSDLLLKWSGLVESKIRILIGKLEDNENIKIAHVNPTSYPRIVPDSTDSHLMWFIGLEF 433
Query: 474 ---PGRTNLLDIVAVEKDFLKNIHN--GFQGSPGRMGLLVVQASQLSKSSQLDFGSGRR 527
PG N+ ++ F+ ++ Q SP L +QLD RR
Sbjct: 434 CVGPGGVNITLTYEIQM-FINSVVKSPALQSSP-----------DLRNGTQLDVKHARR 480
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 218/395 (55%), Gaps = 19/395 (4%)
Query: 57 NSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIV 116
SP+ L P PS D + ++ L++ M G+ EE R V+ KL V
Sbjct: 22 TSPISLAP-------PSDKDHIHTQK---LIEAMKPFGVFEDQEELYHRTTVLGKLNNFV 71
Query: 117 LAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV 176
W+ +A + LP + I T+GSY LGVH SDIDALC+ P + DFF
Sbjct: 72 REWILELAESKNLPPSITEQVGGKIFTFGSYRLGVHTKGSDIDALCVAPSHVERS-DFFQ 130
Query: 177 VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR 236
LK++ EV + ++DA VP+++F+FDGI IDL +A L + +V +++D+ + L+
Sbjct: 131 SFFEKLKNQEEVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSDDLDLRDDSCLK 190
Query: 237 DLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAI 296
LD +SL+G R IL+LVP+LE F+ LR +KLWAKRRGVY N+ GFLGGV A+
Sbjct: 191 SLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSWAM 250
Query: 297 LVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD--------PMLPAAGYPSETRS 348
LVA +CQ +P +TL+ FF ++ W WP PV+L+ P+ PS+
Sbjct: 251 LVARICQLYPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYH 310
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
+MPI P P + N++ ST + EF RG T ++++ DW LFEP + +KY
Sbjct: 311 VMPIITPAYPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSKLFEPLNFFQKY 370
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++ + SA ++ +W+G VKS+ R L+ LE
Sbjct: 371 KHYIVLTASAFTEEHHLNWIGLVKSKIRVLVGNLE 405
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 217/397 (54%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + ++E + +L++ + +G + EE R V+ +L +V +V+RV+
Sbjct: 13 PISTSESNDREKEVTTTLMEELRRQGTFETEEEAKTREIVLGRLAAVVKKFVRRVSLANG 72
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + I T+GSY LGVHG SDID LC+ P+ T EDFF VL MLK V
Sbjct: 73 MSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-EDFFDVLEEMLKETEGV 131
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP+++ K +GI IDL A L + S+P+++ + + LR+LDE +SL+G
Sbjct: 132 TEVSGVPEAYVPIIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLLRNLDERCVRSLNG 191
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 192 SRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 251
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+V+ FF W WP PV+L+ +P L YP++ MPI P
Sbjct: 252 IAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKL----YPADRAHRMPIITPA 307
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T ST + EF +G ++ +W LF + K+ +++V
Sbjct: 308 YPSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFFHKHRYYLQVIA 367
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S N D W G V+SR R L++KLE V+ L +P
Sbjct: 368 STGNSDLQIKWSGTVESRIRQLVMKLEYVESLILAHP 404
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 215/407 (52%), Gaps = 24/407 (5%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E + L +L+ EGL S EE R V++ L+ +V WVKR+ QR P
Sbjct: 24 DLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVDRWVKRLTRQRGYPDGMADRAT 83
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A +L +GSY LGVHG SDIDAL +GP + DFF L L V+E+ V A
Sbjct: 84 ALVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDRDFFGALAAALAETAGVAELQPVPGAH 143
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +F G+ +DL YA + + VP ++D+ LR LD + +SL+GVR IL+L
Sbjct: 144 VPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVRVADEILRL 203
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VPD F+ LRC+K WAK RGVY N+ GFLGGV AILVA VC +P S + L+ FF
Sbjct: 204 VPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVARVCLLYPNASPSMLLPRFF 263
Query: 319 KTYAYWPWPTPVMLQD------------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
+ +A W WP+PVML+ P+ P + LMPI P P N+
Sbjct: 264 RVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPCMNSGYNV 323
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDF---DWHFLFEPFPYSKKYARF--VRVYLSASNQ 421
+ +T I + G +++++ W LF+PF + Y + V V ++ +
Sbjct: 324 SHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDVTVTGGEE 383
Query: 422 DDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPH 465
DDL +W GWV+SR R L ++E + G LC +P Y EPH
Sbjct: 384 DDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPY----AAEPH 426
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 217/382 (56%), Gaps = 12/382 (3%)
Query: 73 SVLDQMDEERSLS--LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S+ + +++R L+ L++ + G+ S E RR V+ KL EIV +V V+ +R+LP
Sbjct: 15 SLAEPTEKDRVLTEKLIEHIEPYGVFESESEHSARRIVLGKLNEIVKEFVMNVSEERKLP 74
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ I + T+GSY LGV +DID LC+ P + DFF V +LK R EVSE
Sbjct: 75 QSLIDTAGGKLYTFGSYRLGVCAKGADIDTLCVVPRHVNRS-DFFSVFCTLLKERSEVSE 133
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+ ++DA VP+++ KF+G+ ID+ ++ L + VP + D+ + L++LD +SL+G R
Sbjct: 134 LRAIEDAFVPVIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNLDIRCIRSLNGCR 193
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
IL LVP++E F+ LR IKLWAKR+G+Y N+ G+LGGV A+LVA CQ +P
Sbjct: 194 VTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLVARTCQLYPNAIA 253
Query: 311 NTLVANFFKTYAYWPWPTPVMLQDPM------LPA---AGYPSETRSLMPIRLPCSPHEY 361
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 254 STLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPIITPAYPQQN 313
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ 421
N+TRS+ ++ EF+ G+ T ++ W L E + +Y F+ + SA +Q
Sbjct: 314 STYNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPNFFNEYKHFIVLMASAESQ 373
Query: 422 DDLGDWVGWVKSRFRSLILKLE 443
++ W G V+S+ R L+ LE
Sbjct: 374 ENFNLWTGLVESKIRILVGYLE 395
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 219/409 (53%), Gaps = 21/409 (5%)
Query: 58 SPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVL 117
SP+ L P P +D + ++ LV++M + G+ EE + R V+ KL +V
Sbjct: 160 SPISLAP-------PKDIDYIHTQK---LVEVMESFGVFEDEEELNHRLVVLCKLNNLVK 209
Query: 118 AWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV 177
W+ + + LP + I T+GSY LGVH +DIDALC+ P + DFF
Sbjct: 210 EWIFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQS 268
Query: 178 LHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRD 237
LK + E+ + V+DA VP+++F+FDGI IDL +A L V +V +N+D+ + LR
Sbjct: 269 FFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRS 328
Query: 238 LDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAIL 297
LD +SL+G R IL LVP+ E FQ LR IKLWAKRRG+Y N+ GFLGGV A+L
Sbjct: 329 LDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAML 388
Query: 298 VAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSL 349
VA CQ HP +TLV FF ++ W WP PV+L+ P LP PS+ +
Sbjct: 389 VARTCQLHPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHV 448
Query: 350 MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYA 409
MPI P P + N++ ST + E G T ++++ DW LFE + +KY
Sbjct: 449 MPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNFFQKYK 508
Query: 410 RFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
++ + S ++ +WVG V+S+ R L+ LE E + NP +
Sbjct: 509 HYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSF 557
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 218/409 (53%), Gaps = 21/409 (5%)
Query: 58 SPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVL 117
SP+ L P P +D + ++ LV+ M + G+ EE + R V+ KL +V
Sbjct: 22 SPISLAP-------PKDIDYIHTQK---LVEAMESFGVFEDEEELNHRLVVLCKLNNLVK 71
Query: 118 AWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV 177
W+ + + LP + I T+GSY LGVH +DIDALC+ P + DFF
Sbjct: 72 EWIFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQS 130
Query: 178 LHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRD 237
LK + E+ + V+DA VP+++F+FDGI IDL +A L V +V +N+D+ + LR
Sbjct: 131 FFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRS 190
Query: 238 LDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAIL 297
LD +SL+G R IL LVP+ E FQ LR IKLWAKRRG+Y N+ GFLGGV A+L
Sbjct: 191 LDIRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAML 250
Query: 298 VAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSL 349
VA CQ HP +TLV FF ++ W WP PV+L+ P LP PS+ +
Sbjct: 251 VARTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHV 310
Query: 350 MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYA 409
MPI P P + N++ ST + E G T ++++ DW LFE + +KY
Sbjct: 311 MPIITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYK 370
Query: 410 RFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
++ + S ++ +WVG V+S+ R L+ LE E + NP +
Sbjct: 371 HYIVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSF 419
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 170/265 (64%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + + + GL S +E KR V+ ++ +IV WVK++ QR + + E +
Sbjct: 18 DLHRNAELEKFLVDSGLNESKDETIKREEVLGRIDQIVKDWVKQLTRQRGYTDQMVEEAN 77
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A I T+GSY LGVHG +DID LC+GP + EDFF+ LH+ L EV+E+ V DA
Sbjct: 78 AVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFITLHDKLAETEEVTELQPVPDAH 137
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M+FKF GI IDL YA + +L VPE++D+ N L ++DE + +SL+G R IL+L
Sbjct: 138 VPVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQTVRSLNGCRVADQILKL 197
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+ FF
Sbjct: 198 VPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFF 257
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP 343
+ Y W WP PVML G+P
Sbjct: 258 RVYTQWRWPNPVMLCSIEEDDLGFP 282
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 209/377 (55%), Gaps = 17/377 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ +L + + S EE + R ++ KL +V WVK ++ + +P+ +
Sbjct: 56 DLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLVKQWVKEMSVSKNMPESAAEKLG 115
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P A D+F +LK +PEV+E V++A
Sbjct: 116 GKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQSFFEVLKKQPEVTECRSVEEAF 174
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI IDL +A L + +P++ D+ + LR+LD S +SL+G R IL L
Sbjct: 175 VPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILAL 234
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAK+ G+Y N G+ GGV A+LVA CQ +P + TLV FF
Sbjct: 235 VPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNATAATLVHKFF 294
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
++ W WP PV+L+ DP + A S+ LMPI P P + N+
Sbjct: 295 LVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNV 350
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD 426
+ ST + TEF RG N T ++M W LFE + +Y F+ + +++ DD +
Sbjct: 351 SESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQTADDHLE 410
Query: 427 WVGWVKSRFRSLILKLE 443
W G V+S+ R LI LE
Sbjct: 411 WCGLVESKIRLLIGNLE 427
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 209/377 (55%), Gaps = 17/377 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ +L + + S EE + R ++ KL +V WVK ++ + +P+ +
Sbjct: 55 DLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLVKQWVKEMSVSKNMPESAAEKLG 114
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P A D+F +LK +PEV+E V++A
Sbjct: 115 GKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQSFFEVLKKQPEVTECRSVEEAF 173
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI IDL +A L + +P++ D+ + LR+LD S +SL+G R IL L
Sbjct: 174 VPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILAL 233
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAK+ G+Y N G+ GGV A+LVA CQ +P + TLV FF
Sbjct: 234 VPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNATAATLVHKFF 293
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
++ W WP PV+L+ DP + A S+ LMPI P P + N+
Sbjct: 294 LVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNV 349
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD 426
+ ST + TEF RG N T ++M W LFE + +Y F+ + +++ DD +
Sbjct: 350 SESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQTADDHLE 409
Query: 427 WVGWVKSRFRSLILKLE 443
W G V+S+ R LI LE
Sbjct: 410 WCGLVESKIRLLIGNLE 426
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 207/374 (55%), Gaps = 10/374 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D ++ LV+ + G+ + EE + R V+ KL +IV W++ VA ++ +P
Sbjct: 29 DNRQTKELVEALKPHGVFENEEELNHRLVVLGKLDQIVKDWIRLVAEEKNIPPNIADTVG 88
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DID LC+ P DFF ++++K+ PE + V++A
Sbjct: 89 GKIYTFGSYRLGVHTKGADIDTLCVAP-LHVERSDFFKSFYDIVKALPETKDCRAVEEAF 147
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI +D+ +A L + VPEN+D+ + L++LD +SL+G R IL +
Sbjct: 148 VPVIKLVFDGIEMDILFARLALRVVPENLDLTDDSLLKNLDPKCVRSLNGCRVTDEILNV 207
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP E F+ LR IKLWAK++GVY N GFLGGV A+LVA CQ +P + +TLV FF
Sbjct: 208 VPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAMLVARTCQLYPNAAASTLVNKFF 267
Query: 319 KTYAYWPWPTPVMLQDPMLPAA-GYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
+ W WP PV+L+ P G+ S+ LMPI P P + N+++S
Sbjct: 268 LVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMPIITPAYPQQNSTYNVSQS 327
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T I E G T+++M+ W LFE + KY ++ + SA N+DD WVG
Sbjct: 328 TKTVIEQELQGGLAITQEIMQGKATWEKLFESSNFFGKYKHYIVLIASAGNEDDHLKWVG 387
Query: 430 WVKSRFRSLILKLE 443
V+S+ R L+ LE
Sbjct: 388 LVESKIRVLVGNLE 401
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 64 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 123
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 124 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 182
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 183 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 242
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 243 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 302
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
DP + A S+ LMPI P P + N++ ST I TEF RG N T
Sbjct: 303 VNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNIT 358
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++M W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 359 DEIMLGRISWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 416
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 210/385 (54%), Gaps = 11/385 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +++ L + + + E + R ++ KL +V WV+ V+ + +P+ +
Sbjct: 103 DIQKTTELEKALEPYNVFEEESELNHRMEILAKLNTLVKQWVRDVSISKNMPEALAEKLG 162
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P A D+F +LK +PEV+E V++A
Sbjct: 163 GKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSFFELLKKQPEVTECRAVEEAF 221
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI IDL +A L + +P+N D+ + L++LD S +SL+G R IL+L
Sbjct: 222 VPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLKNLDPKSVRSLNGCRVTDEILRL 281
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+++ F+ LR IKLWAK+ G+Y N G+ GGV A+LVA CQ +P TLV FF
Sbjct: 282 VPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVHKFF 341
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P G+ + LMPI P P + N++ ST
Sbjct: 342 LVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVSSST 401
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ EF RG T ++M W LFE + KY F+ + ++++N DD +W G
Sbjct: 402 RKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFFFKYRHFIVLLVTSNNADDHLEWCGL 461
Query: 431 VKSRFRSLILKLEEVQ--GLCDPNP 453
V+S+ R LIL LE Q L NP
Sbjct: 462 VESKIRYLILNLERNQHINLAHVNP 486
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 230/424 (54%), Gaps = 16/424 (3%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
P P++ S + D + ++ LV + + + E R V+ KL ++V W+K+V
Sbjct: 7 PGITSPISLSEPTKFDIDLNVKLVNTLKPYNVFDTEEGLTHRMVVLGKLNKLVKEWIKQV 66
Query: 124 AWQRRLPKEQIAET-HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNML 182
+ + +P IAET I T+GSY LGVHG+ +DID LC+ P + DFF + +L
Sbjct: 67 SLAKNMPP-AIAETVGGKIYTFGSYRLGVHGAGADIDTLCVAPRHVDRS-DFFSSFYEIL 124
Query: 183 KSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETS 242
K + E ++I V++A VP+++ FDG+ +D+ +A L + VPE+ D+ L++LD+
Sbjct: 125 KDQKETTDIRGVEEAFVPVIKLDFDGVELDILFARLALPQVPEDQDLREEVLLKNLDQRC 184
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R +L LVP+ E F+ LR IKLWAKRRGVY N+ GFLGGV A+LVA C
Sbjct: 185 VRSLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLVARTC 244
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD---------PMLPAAGYPSETRSLMPIR 353
Q +P +TL+ FF ++ W WP PV+L+ + P + LMPI
Sbjct: 245 QLYPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPII 304
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
P P + N++ ST ++ EF G T+++ W LFEP + KY ++
Sbjct: 305 TPAYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSFFGKYKHYIV 364
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ--GLCDPNPTEYIDVDVTEPHIVFYW- 470
+ SA++++ +WVG V+S+ R LI LE L NP +Y ++ E V W
Sbjct: 365 LSTSATSKEHHLEWVGLVESKVRILIGNLERTAYIALAHVNPKQYPPLNPQEDVFVTNWF 424
Query: 471 -GLQ 473
GLQ
Sbjct: 425 IGLQ 428
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 228/432 (52%), Gaps = 57/432 (13%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + +D S L + + N L + +E +R V+ +L +++ WV+RV+ +
Sbjct: 20 PISTATPTPLDYRLSRELEEFLHNRNLYENNKEAQRREQVLAELHQLINEWVRRVSRSQG 79
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV------------ 176
+ +E ++ET A + T+GSY LGV+ +DID LC+ P + D F
Sbjct: 80 IAEEIVSETEAKLFTFGSYRLGVNPPNADIDTLCIVPRYVERNRDVFGIPSESGSVPEEE 139
Query: 177 -VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFL 235
VL N+ KS P++ ++ V DA VP+++FKF G+ IDL A L +PE +D+L+ L
Sbjct: 140 NVLVNIFKSHPKIEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSKLPERLDILDDSIL 199
Query: 236 RDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLA 295
R++D+ + +S++GVR IL+LVP++E F+ LR +K WAK RG+Y N+ GFLGGV A
Sbjct: 200 RNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGGVSWA 259
Query: 296 ILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--DPMLPAAG--------YPSE 345
ILVA +CQ +P + N +++ FF+ Y+ W WP PV+L P P+ G +P++
Sbjct: 260 ILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVFPAD 319
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG----------HNTTRDLMRPD--- 392
+ LMP+ P P N++R+T I+ E RG N++R + +
Sbjct: 320 RKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTEDTE 379
Query: 393 ---------------------FDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWV 431
W LFE + K+ ++++ + + ++ W G+V
Sbjct: 380 NDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWHGFV 439
Query: 432 KSRFRSLILKLE 443
+S+ R L LKLE
Sbjct: 440 ESKLRVLTLKLE 451
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 186/318 (58%), Gaps = 8/318 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + GL EE KR +V+ ++ IV WVK++ ++ ++ + + +
Sbjct: 35 DLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEWVKQLTRKKGYAEQLVEQAN 94
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A + T+GSY LGVHG +DID LC+GP + EDFFV LH +L + EV+E+ V DA
Sbjct: 95 AILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAEKEEVAELQPVPDAH 154
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++FKF GI IDL YA + + +P + D+ L D+DE + +SL+G R IL+L
Sbjct: 155 VPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVRSLNGCRVADQILRL 214
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LRC+K WAKRRGVY N+ GFLGGV+ A+LVA VCQ +P + LV+ FF
Sbjct: 215 VPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 274
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRST 370
+ + W WP PVML G+ P + LMPI P P N++ ST
Sbjct: 275 RVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSSYNVSTST 334
Query: 371 FYKIRTEFLRGHNTTRDL 388
I +F G+ + L
Sbjct: 335 LRVIMEQFQFGNKVCQVL 352
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 62 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 121
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 122 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 180
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 240
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 241 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 300
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
DP + A S+ LMPI P P + N++ ST I TEF RG N T
Sbjct: 301 VNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNIT 356
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++M W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 357 DEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 414
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 210/379 (55%), Gaps = 17/379 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + + + EE + R ++ KL +V WVK ++ + +P+ +
Sbjct: 43 DLQRTEELSKSLEPYNVFETQEELNHRMEILAKLNTLVKQWVKDISVSKNMPEAAAEKLG 102
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P + D+F +LK +PEV+E V++A
Sbjct: 103 GKIYTFGSYRLGVHHKGADIDALCVAPRNIERS-DYFQSFFEILKKQPEVTECRSVEEAF 161
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDG+ IDL +A L + +P++ D+ + L++LD S +SL+G R IL L
Sbjct: 162 VPVIKMNFDGVEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILAL 221
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAKR G+Y N G+ GGV A+LVA CQ +P + TLV FF
Sbjct: 222 VPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFF 281
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
++ W WP PV+L+ DP + A S+ LMPI P P + N+
Sbjct: 282 LVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNV 337
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD 426
+ ST I TEF RG + T ++M W LFE + +Y F+ + +++ DD +
Sbjct: 338 SESTKKVILTEFNRGMSITDEIMLGRVGWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLE 397
Query: 427 WVGWVKSRFRSLILKLEEV 445
W G V+S+ R LI LE +
Sbjct: 398 WCGLVESKVRLLIGNLERI 416
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 62 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 121
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 122 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 180
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 240
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 241 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 300
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
DP + A S+ LMPI P P + N++ ST I TEF RG N T
Sbjct: 301 VNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNIT 356
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++M W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 357 DEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLE 414
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 62 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 121
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 122 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 180
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 240
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 241 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 300
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
DP + A S+ LMPI P P + N++ ST I TEF RG N T
Sbjct: 301 VNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNIT 356
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++M W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 357 DEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 414
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 62 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 121
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 122 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 180
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 240
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 241 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 300
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
DP + A S+ LMPI P P + N++ ST I TEF RG N T
Sbjct: 301 VNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNIT 356
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++M W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 357 DEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 414
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 62 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 121
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 122 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 180
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 240
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 241 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 300
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
DP + A S+ LMPI P P + N++ ST I TEF RG N T
Sbjct: 301 VNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNIT 356
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++M W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 357 DEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 414
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 207/377 (54%), Gaps = 17/377 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + S +E + R ++ KL +V WVK ++ + +P+ +
Sbjct: 44 DLQRTEELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLG 103
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P D+F +LK +PEV+E V++A
Sbjct: 104 GKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAF 162
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI IDL +A L + +P++ D+ + LR+LD S +SL+G R IL L
Sbjct: 163 VPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILAL 222
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAK+ G+Y N G+ GGV A+LVA CQ +P + TLV FF
Sbjct: 223 VPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFF 282
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
++ W WP PV+L+ DP + A S+ LMPI P P + N+
Sbjct: 283 LVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNV 338
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD 426
+ ST I TEF RG N T ++M W LFE + +Y F+ + +++ DD +
Sbjct: 339 SESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLE 398
Query: 427 WVGWVKSRFRSLILKLE 443
W G V+S+ R LI LE
Sbjct: 399 WCGLVESKVRLLIGNLE 415
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 200/358 (55%), Gaps = 17/358 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 62 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 121
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 122 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 180
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 240
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+
Sbjct: 241 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 300
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
DP + A S+ LMPI P P + N++ ST I TEF RG N T
Sbjct: 301 VNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNIT 356
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++M W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 357 DEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 414
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 199/354 (56%), Gaps = 9/354 (2%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 74 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGAD 133
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 134 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 192
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + L++LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 193 LSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 252
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPML 337
+ G+Y N G+ GGV A+LVA CQ +P + TLV FF ++ W WP PV+L+ P
Sbjct: 253 KHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDN 312
Query: 338 PAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
+P S+ LMPI P P + N++ ST I TEF RG N T ++M
Sbjct: 313 VNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIM 372
Query: 390 RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
W LFE + +Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 373 LGRVPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 426
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 207/373 (55%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + + S +E + R ++ KL +V WVK ++ + +P+ +
Sbjct: 54 DLQRTEELSKSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNMPEAAAEKLG 113
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P D+F +LK +PEV+E V++A
Sbjct: 114 GKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAF 172
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI IDL +A L + +P++ D+ + L++LD S +SL+G R IL L
Sbjct: 173 VPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILAL 232
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAK+ G+Y N G+ GGV A+LVA CQ +P + TLV FF
Sbjct: 233 VPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFF 292
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P +P S+ LMPI P P + N++ ST
Sbjct: 293 LVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSEST 352
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I TEF RG + T ++M W LFE + +Y F+ + +++ DD +W G
Sbjct: 353 KKVILTEFNRGMSITDEIMLGRVSWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGL 412
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 413 VESKVRLLIGNLE 425
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 217/416 (52%), Gaps = 23/416 (5%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
MD + S L + E + S EE +R V+ ++ E + WVK + + + E+ E
Sbjct: 1 MDVKLSAELEARLHLENVFESPEECARREEVLGEINEALQEWVKAASAAKGI--EEDLEP 58
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV--------LHNMLKSRPEVS 189
+ T+GSY LGVHG +DID LC+GP + +EDFF + +K+ P
Sbjct: 59 RCNLYTFGSYRLGVHGPAADIDTLCIGPRHLSRSEDFFGSEWTEYEGSFYLAMKNHPGTD 118
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
I V DA VP ++ F G +D+ Y L ++VPE++DV L++LD+ S KSL+G
Sbjct: 119 RIVAVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVKSLNG 178
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R +L+LVP+ F+ LR +++WA+ RGVY N+ GF GGV+LAILVA VCQ +P
Sbjct: 179 CRVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQLYPNA 238
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ + LV +FF+ + W W TPVML + G +E LM I P P +
Sbjct: 239 AASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQ 298
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+T ST + ++ EF RG T ++ W L+EP P+ + +++V + A
Sbjct: 299 NSTFNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPFFTMHKHYLQVTMCAIT 358
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYID-VDVTEPHIVFYWGL 472
+DD W GWV SR R L+ +E G + P P D + H ++Y GL
Sbjct: 359 EDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGL 414
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 204/373 (54%), Gaps = 11/373 (2%)
Query: 94 GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
G+ E +R V+ KL +V W++ V+ + +P I I T+GSY LGVH
Sbjct: 49 GVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHT 108
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
+DIDALC+ P DFF + LK + EV ++ V++A VP+++ FDGI ID+
Sbjct: 109 KGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDI 167
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
+A L + ++PEN+D+ + L++LD +SL+G R IL LVP++E F+ LR IK
Sbjct: 168 LFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIK 227
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
LWAKR +Y N+ GFLGGV A+LVA CQ +P TLV FF ++ W WP PV+L+
Sbjct: 228 LWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLK 287
Query: 334 DPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
P LP PS+ LMPI P P + N++ ST + EF RG T
Sbjct: 288 QPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAIT 347
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-- 443
++++ DW LFE + +KY ++ + SA + +WVG V+S+ R L+ LE
Sbjct: 348 DEILQNKADWSKLFEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKN 407
Query: 444 EVQGLCDPNPTEY 456
E L NP +
Sbjct: 408 EFITLAHVNPQSF 420
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 205/373 (54%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +++ L + + + E + R ++ KL +V WV+ V+ + +P+ +
Sbjct: 47 DHTKTVELQKALEPYNVFEDESELNHRMEILSKLNTLVKQWVRDVSISKNMPEALAEKLG 106
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P +D+F +LK +PEV+E V++A
Sbjct: 107 GKIYTFGSYRLGVHHKGADIDALCVAPR-NIERQDYFGSFFELLKKQPEVTECRAVEEAF 165
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI IDL +A L + +P+N D+ + L++LD S +SL+G R IL+L
Sbjct: 166 VPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDPKSVRSLNGCRVTDEILRL 225
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+++ F+ LR IKLWAK+ G+Y N G+ GGV A+LVA CQ +P TLV FF
Sbjct: 226 VPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVHKFF 285
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P G+ + LMPI P P + N++ ST
Sbjct: 286 LVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVSSST 345
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ EF RG T ++M W LFE + KY F+ + ++++N DD +W G
Sbjct: 346 RKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRHFIVLLVTSNNADDHLEWCGL 405
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 406 VESKIRYLIQNLE 418
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 209/374 (55%), Gaps = 9/374 (2%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 37 LDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNMPPNVAEQV 96
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DIDALC+ P + D+F +LK + EV+++ V++A
Sbjct: 97 GGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFNSFFELLKMQEEVTDLRAVEEA 155
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+
Sbjct: 156 FVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 215
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ F
Sbjct: 216 LVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKF 275
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P GYP S+ LMPI P P + N++ S
Sbjct: 276 FLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVS 335
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T ++ F G + T +++ +W LFEP + KY ++ + +S +D +W G
Sbjct: 336 TRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFFSKYKHYIVLLARSSTAEDQLEWCG 395
Query: 430 WVKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 396 LVESKIRHLIGTLE 409
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 213/404 (52%), Gaps = 39/404 (9%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +++ L + +GL S EE R V+ +L +V WV+RV L + ET+
Sbjct: 12 DFQQTADLELCLREQGLYESNEEAVLREEVLGRLDRLVKEWVQRVCAWLGLGEFGEVETN 71
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV----LHNMLKSRPEVSEIHCV 194
A I T+GSY LGVHG +DID LC+GP + FF L ML PEV+E+ V
Sbjct: 72 AKIFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKMLSDLPEVTELQPV 131
Query: 195 KDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKC 254
D+ VP+++ KF G+ IDL YA L VPEN+DV LR+ D+ S +SL+G R
Sbjct: 132 VDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKSVRSLNGCRVTDT 191
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLV 314
+L V +E F+ LR IKLWA+RRG+Y N+ G+LGGV+ AILVA+ C+ +P G + +V
Sbjct: 192 LLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTCKLYPCGIASVIV 251
Query: 315 ANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNI 366
FFK +A WPWPTP+ML++ A G P ++ LMPI P P N+
Sbjct: 252 DRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITPAYPAANSSYNV 311
Query: 367 TRSTF--YKIRT----------EFLRGHNT-TRDLMRPDF-DWHFLFEPFPYSKKYARFV 412
+ ST K RT EF G TR L WH L EP P+ + Y ++
Sbjct: 312 SESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEPVPFFRNYRNYL 371
Query: 413 --RVYLSASNQDDLGD-----------WVGWVKSRFRSLILKLE 443
R++L+ S W GWV SR R L++++E
Sbjct: 372 QARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE 415
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 215/393 (54%), Gaps = 9/393 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + ++E +++L+ + +G + EE R V+ ++ +V +V+ V+ +R
Sbjct: 13 PISTNESNAREKEVTVTLMDELRRQGTFETEEEAKTREIVLGRVAALVKRFVRHVSLKRG 72
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG SDID LC+ P+ + EDFF V MLK V
Sbjct: 73 LSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFEVFEEMLKETEGV 131
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E V DA VP+++ K GI +DL A L + ++P+++ + + LR+LDE +SL+G
Sbjct: 132 TEASGVPDAYVPILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLLRNLDERCVRSLNG 191
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 192 SRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 251
Query: 309 SLNTLVANFFKTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLMPIRLPCSPHE 360
+V+ FF W WP PV+L +D LP YP++ MPI P P
Sbjct: 252 IAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSM 311
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G ++ +W LF + KY +++V S +
Sbjct: 312 CATHNVSASTQMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDFFHKYRYYLQVIASTGS 371
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
Q+ W G V+SR R L++KLE V L +P
Sbjct: 372 QELQTKWAGTVESRIRQLVMKLEYVDSLTLAHP 404
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 208/374 (55%), Gaps = 9/374 (2%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 41 IDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNMPPNVAEQV 100
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DIDALC+ P + D+F +LK + EV+++ V++A
Sbjct: 101 GGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFATFFELLKMQEEVTDLRAVEEA 159
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+
Sbjct: 160 FVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNLDQKCVRSLNGCRVTDEILR 219
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ F
Sbjct: 220 LVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKF 279
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P GYP S+ LMPI P P + N++ S
Sbjct: 280 FLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSVS 339
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T ++ F G T +++ W LFEP + KY ++ + +S+ +D +W G
Sbjct: 340 TRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFFGKYKHYIVLLARSSSAEDQLEWCG 399
Query: 430 WVKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 400 LVESKIRHLIGTLE 413
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 220/414 (53%), Gaps = 14/414 (3%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
P P++ ++ +D ++S L ++ GL S E D R V+ ++ E+V W++ V
Sbjct: 17 PGVTAPISVALPRPVDLDKSKELEAVLHEFGLFESASELDHRLQVLGRINELVQQWIQEV 76
Query: 124 AWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
+ + +P+ + T I T+GSY LGVH +DID LC+ P DFF +LK
Sbjct: 77 SIAKGVPENIASSTRGKIFTFGSYRLGVHTKGADIDTLCVAPRHVERT-DFFTSFVELLK 135
Query: 184 SRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSW 243
+P+V ++ V++A VP+++ +FDGI D+ +A L + +P + ++ + L++LD
Sbjct: 136 QQPQVRDLRAVEEAYVPVIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLKNLDAKCV 195
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G R IL LVPD+ F+ LR IKLWAK++GVY N+ G+LGGV A+LVA CQ
Sbjct: 196 RSLNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAMLVARTCQ 255
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLP---AAGYP--------SETRSLMPI 352
+P + +V FF ++ WPWP PV L+ G+ ++ LMPI
Sbjct: 256 LYPHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHLMPI 315
Query: 353 RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV 412
P P + N + ST + F G T ++++ WH LF P + +Y F+
Sbjct: 316 ITPVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFSPPEFFGQYKTFI 375
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ--GLCDPNPTEYIDVDVTEP 464
+ A+ ++DL W G V+S+ R+LI+ LE V + NP Y V +P
Sbjct: 376 MLTAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKP 429
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 212/397 (53%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S +++ +++++ + +G S EE R V+ ++ +V +V +VA R
Sbjct: 15 PISSSESTDAEKKVTVAMMDELRRQGTFESEEEARTRELVLGRVATLVKKFVHKVALSRG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + A I T+GSY LGVHG SDID LC+ P+ + EDFF V ML+ V
Sbjct: 75 LSESAAAAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFEVFEPMLREVEGV 133
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
SE+ V +A VP+++ K GI ID A L + S+P+++ + + L++LDE +SL+G
Sbjct: 134 SEVSGVPEAYVPIIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNLLKNLDERCIRSLNG 193
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 194 SRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 253
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+V+ FF W WP PV+L+ +P L YP + MPI P
Sbjct: 254 VAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRL----YPGDRSHRMPIITPA 309
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T ST + EF RG + ++ W LF + KY ++++
Sbjct: 310 YPAMCATHNVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDFFHKYRYYLQIIA 369
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S N D W G V+SR R L++KLE V L +P
Sbjct: 370 STGNPDLQIKWAGTVESRIRQLVMKLEYVDALTLAHP 406
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 215/407 (52%), Gaps = 24/407 (5%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E + L +L+ EGL S EE R V++ L+ +V WVKR+ QR P
Sbjct: 24 DLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVDRWVKRLTRQRGYPDGMADRAT 83
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A +L +GSY LGVHG SDIDAL +GP + DFF L L V+E+ V A
Sbjct: 84 ALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFFGALATALAETAAVAELQPVPGAH 143
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +F G+ +DL YA + + VP ++D+ LR LD + +SL+GVR IL+L
Sbjct: 144 VPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVRVADEILRL 203
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VPD F+ LRC+K WAK RGVY N+ GFLGGV AILVA VC +P S + L+ FF
Sbjct: 204 VPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYPNASPSMLLPRFF 263
Query: 319 KTYAYWPWPTPVMLQD------------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
+ +A W WP+PVML+ P+ P + LMPI P P N+
Sbjct: 264 RVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPCMNSGYNV 323
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDF---DWHFLFEPFPYSKKYARF--VRVYLSASNQ 421
+ +T I + G +++++ W LF+PF + Y + V V ++ +
Sbjct: 324 SHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDVTVTGGEE 383
Query: 422 DDLGDWVGWVKSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPH 465
DDL +W GWV+SR R L ++E + G LC +P Y EPH
Sbjct: 384 DDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPY----AAEPH 426
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 208/377 (55%), Gaps = 17/377 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D +R+ L + + + S +E + R ++ KL +V W+K ++ + +P+
Sbjct: 41 DLQRTGELGKSLEPYNVFESQDELNHRMEILAKLNTLVKQWIKEISVSKNMPEAAADRLG 100
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P D+F +LK +PEV+E V++A
Sbjct: 101 GKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAF 159
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI IDL +A L + +P++ D+ + L++LD S +SL+G R IL L
Sbjct: 160 VPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILAL 219
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAK+ G+Y N G+ GGV A+LVA CQ +P + TLV FF
Sbjct: 220 VPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFF 279
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
++ W WP PV+L+ DP + A S+ LMPI P P + N+
Sbjct: 280 LVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNA----SDRYHLMPIITPAYPQQNSTFNV 335
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD 426
+ ST I TEF RG + T ++M +W LFE + +Y F+ + +++ DD +
Sbjct: 336 SESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLE 395
Query: 427 WVGWVKSRFRSLILKLE 443
W G V+S+ R LI LE
Sbjct: 396 WCGLVESKVRLLIGNLE 412
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 207/374 (55%), Gaps = 9/374 (2%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
MD R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 29 MDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNMPPNVAEQV 88
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DIDALC+ P A D+F ++L+ + EV+++ V++A
Sbjct: 89 GGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRA-DYFTSFFDLLRMQEEVTDLRAVEEA 147
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+
Sbjct: 148 FVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 207
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ F
Sbjct: 208 LVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKF 267
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P GYP S+ LMPI P P + N++ S
Sbjct: 268 FLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSIS 327
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T ++ F G T +++ W LFEP + KY ++ + + +D +W G
Sbjct: 328 TRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLTAEDQLEWCG 387
Query: 430 WVKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 388 LVESKIRHLIGMLE 401
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 210/395 (53%), Gaps = 19/395 (4%)
Query: 73 SVLDQMDEERSLS--LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S D D E+ L+ L++ + +G + EE R V+ ++ V +V++V+ R L
Sbjct: 15 STADSSDREKELTKTLMEELRRQGTFENVEESRTRELVLGRVAAAVKKFVRQVSLSRGLS 74
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ I T+GSY LGVHG+ SDID LC+ P+ + EDFF +L+ SE
Sbjct: 75 ESAATAAGGKIFTFGSYRLGVHGAGSDIDTLCVVPKH-VLREDFFETFEPILREVEGASE 133
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+ V +A VP+++ K GI +D A L + S+P+++ + + LR+LDE +SL G R
Sbjct: 134 VSGVPEAYVPIIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDERCIRSLGGSR 193
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
N IL+LVP++E ++ LRCIKLWA+RR +Y N++GFLGGV AILVA +CQ +P
Sbjct: 194 VNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVARICQLYPNAVA 253
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V+ FF W WP PV+L+ +P L YP + MPI P P
Sbjct: 254 GAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKL----YPGDRSHRMPIITPAYP 309
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
N+T+ST + EF +G + ++ W LF + KY +++V S
Sbjct: 310 AMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSATWADLFRKHDFFHKYRYYLQVIAST 369
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
N + W G V+SR R L++KLE V L +P
Sbjct: 370 DNTETQIKWAGTVESRLRQLVMKLEYVDSLILAHP 404
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 208/374 (55%), Gaps = 9/374 (2%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
MD R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 39 MDISRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNMPPNVAEQV 98
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DIDALC+ P +D+F ++LK + EV+++ V++A
Sbjct: 99 GGKIYTFGSYRLGVHHKGADIDALCVVPRH-IYRQDYFTSFFDLLKMQEEVTDLRAVEEA 157
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+
Sbjct: 158 FVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 217
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ F
Sbjct: 218 LVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKF 277
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P GYP ++ LMPI P P + N++ S
Sbjct: 278 FLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSVS 337
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T ++ F G T +++ W LFEP + KY ++ + + + +D +W G
Sbjct: 338 TRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLSAEDQLEWCG 397
Query: 430 WVKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 398 LVESKIRHLIGMLE 411
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 215/402 (53%), Gaps = 36/402 (8%)
Query: 66 FNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAW 125
F P++ + D + + L Q + ++GL S EE + R V+ +L +V W++ VA
Sbjct: 7 FVEPISQAEPTPQDLKHTRDLEQHLRDQGLYESQEEAELREVVLGRLDGLVKEWIRGVAA 66
Query: 126 QRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV----VLHNM 181
R P E + +A I T+GSY LGVHG +DID LC+GP +AT DFF L M
Sbjct: 67 LRGHPPE---DANAKIFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCLQAM 123
Query: 182 LKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDET 241
L + PEV + V A VP+M KF GI IDL YA L V V E++D+ LR D+
Sbjct: 124 LCALPEVLALRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHCDDQ 183
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
S +SL+G R IL+ VP + F+ LRC+KLWA+RRGVY N+ G+LGGV+ AILVA+V
Sbjct: 184 SVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILVAYV 243
Query: 302 CQNHPKGSLNTLVAN-----------FFKTYAYWPWPTPVML----QDPMLPAAGY---- 342
C+ P L+A+ + Y+ W WPTP+ML +DP L +
Sbjct: 244 CKLQP-----CLLASPPHLGPAPCLPVPQVYSQWAWPTPIMLRAIERDPSLAMPVWDPRE 298
Query: 343 -PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPD----FDWHF 397
P + LMPI P P N++ T + EF RG +M + DW
Sbjct: 299 NPRDRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQ 358
Query: 398 LFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
L EP P+ + + F++V + AS+Q+D W GWV SR R LI
Sbjct: 359 LLEPLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMRLLI 400
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 205/379 (54%), Gaps = 9/379 (2%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D E++ L + + G+ S E R V+ L +V W++ + ++ +P
Sbjct: 45 IDIEKTNELKESLVPFGVFESEAEMHHRMEVLGSLHRLVRQWIRDESLRKNMPPSVADTV 104
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DIDALC+ P + D+F + +LK +P+V ++ V+DA
Sbjct: 105 GGNIYTFGSYRLGVHHRGADIDALCVAPRHIDRS-DYFQSFYELLKEQPQVKDLRAVEDA 163
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ FDGI IDL +A L + +P++ D+ + L++LD+ +SL+G R IL+
Sbjct: 164 FVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVRSLNGCRVTDEILR 223
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVPD+ F+ LR IKLWAKR G+Y N G+LGGV A+LVA CQ +P TL+ F
Sbjct: 224 LVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLYPNALPATLLHKF 283
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P G+P S+ LMPI P P + N++ S
Sbjct: 284 FLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPIITPAYPQQNSTFNVSSS 343
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T I EF G T ++M W LFE + +Y F+ + S++N D W G
Sbjct: 344 TRTVIMEEFRLGLAITDEIMLGKCGWERLFEAANFFSRYKHFIVLLASSANTLDQLPWCG 403
Query: 430 WVKSRFRSLILKLEEVQGL 448
V+S+ R LI LE Q +
Sbjct: 404 LVESKIRHLITTLERNQHI 422
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 209/383 (54%), Gaps = 9/383 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
++E +++L++ + +G S E R V+ +L +V +V +V+ R L +
Sbjct: 32 EKEVTVTLLEELRRQGTFESEAEAKTREIVLGRLAALVKKFVHQVSLSRGLSEAAATAAG 91
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVHG SDID LC+ P+ + EDFF V +MLK V E+ V DA
Sbjct: 92 GKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFDVFEDMLKETEGVIEVSGVPDAY 150
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ K GI IDL A L + ++ +++ + + LR+LDE +SL+G R IL+L
Sbjct: 151 VPIIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRNLDERCVRSLNGSRVTDEILRL 210
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P +V+ FF
Sbjct: 211 VPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFF 270
Query: 319 KTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
W WP PVML +D LP YP++ MPI P P N+T+ST
Sbjct: 271 IIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTQST 330
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ EF + + +++ W LF + KY +++V S D W G
Sbjct: 331 QMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDFFHKYRYYLQVIASTGGPDVQIKWSGT 390
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V+SR R L++KLE V+ L +P
Sbjct: 391 VESRIRQLVMKLEYVESLALAHP 413
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 223/431 (51%), Gaps = 35/431 (8%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+L+Q + N G S + KR V+ + +V +V V+ + + + + T+
Sbjct: 27 ALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVYTVSKSKNMSDSMAQDAGGKVFTF 86
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ T +DFF V ++++ RPE+ EI CV DA VP+++
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFADIIRKRPELEEIACVPDAYVPIIKL 145
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+FDGI IDL A L++ VP ++ + + L++LDE +SL+G R ILQLVP
Sbjct: 146 EFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVPKPTV 205
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LRCIKLWA++R VYGN+ GF GGV A+LVA +CQ +P + +V FF Y W
Sbjct: 206 FKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSAIVEKFFNIYTKW 265
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P L YP + MP+ P P NIT ST
Sbjct: 266 NWPEPVLLKSIEDGPLQVRVWNPRL----YPHDRLHRMPVITPAYPSMCATHNITSSTQK 321
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLGDWVGWV 431
I E RG + +++ W LFE + KY ++ V S + ++ W G++
Sbjct: 322 VILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASIDSAEEHKKWSGFI 381
Query: 432 KSRFRSLILKLEEVQGLCDPNP------TEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
+S+ R L+LKLE +G+ +P +I D I+ +G G
Sbjct: 382 ESKLRQLVLKLEVAEGVEIAHPYVKDFSNTFILDDKNAEDIINSYGTLSG---------- 431
Query: 486 EKDFLKNIHNG 496
+DFL+ +H+
Sbjct: 432 -EDFLRTLHSS 441
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 216/397 (54%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++ ++E +++L++ + + S EE R V+ ++ +V +V +++ R
Sbjct: 17 PISTAESNEREKEVTVTLMEELRRQNTFESEEEARTREIVLGRVAALVKKFVYKISIARG 76
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG SDID LC+ P+ T EDFF MLK V
Sbjct: 77 LSESAAQAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-EDFFDTFEPMLKEMEGV 135
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP+++ + DGI +D A L++ S+P+++ + + LR+LDE +SL G
Sbjct: 136 TEVSGVPEAYVPIIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRNLDERCVRSLGG 195
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 196 SRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQLYPNA 255
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+V+ FF W WP PV+L+ +P L YP++ MPI P
Sbjct: 256 LAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKL----YPADRAHRMPIITPA 311
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T ST + EF RG + ++ W LF + KY ++++
Sbjct: 312 YPSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDFFHKYRYYLQIIA 371
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S + D W G V+SR R L++KLE V+ L +P
Sbjct: 372 STGDPDLQNKWSGTVESRIRQLVMKLEYVESLILAHP 408
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 223/431 (51%), Gaps = 35/431 (8%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+L+Q + N G S + KR V+ + +V +V V+ + + + + T+
Sbjct: 27 ALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVYTVSKSKNMSDSMAQDAGGKVFTF 86
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ T +DFF V ++++ RPE+ EI CV DA VP+++
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFADIIRKRPELEEIACVPDAYVPIIKL 145
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+FDGI IDL A L++ VP ++ + + L++LDE +SL+G R ILQLVP
Sbjct: 146 EFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVPKPTV 205
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LRCIKLWA++R VYGN+ GF GGV A+LVA +CQ +P + +V FF Y W
Sbjct: 206 FKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSAIVEKFFNIYTKW 265
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P L YP + MP+ P P NIT ST
Sbjct: 266 NWPEPVLLKSIEDGPLQVRVWNPRL----YPHDRLHRMPVITPAYPSMCATHNITSSTQK 321
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLGDWVGWV 431
I E RG + +++ W LFE + KY ++ V S + ++ W G++
Sbjct: 322 VILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASIDSAEEHKKWSGFI 381
Query: 432 KSRFRSLILKLEEVQGLCDPNP------TEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
+S+ R L+LKLE +G+ +P +I D I+ +G G
Sbjct: 382 ESKLRQLVLKLEVAEGVEIAHPYVKDFSNTFILDDKNAEDIINSYGTLSG---------- 431
Query: 486 EKDFLKNIHNG 496
+DFL+ +H+
Sbjct: 432 -EDFLRTLHSS 441
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 233/431 (54%), Gaps = 18/431 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D E + L++ + G+ EE +R ++QKL +V W++ ++ R
Sbjct: 26 PISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRN 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P DFF ++ LK + EV
Sbjct: 86 LPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY----IDVDVTEPHIVFYWGL-- 472
+ +WVG V+S+ R L+ LE E L NP + +VD E ++ GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEEFRTMWVIGLVL 444
Query: 473 -QPGRTNLLDI 482
+P + +L I
Sbjct: 445 KKPENSEILSI 455
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 207/387 (53%), Gaps = 11/387 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ +E + +L+ + S EE R V+ +L +V +V +V+ + E
Sbjct: 16 RAEELSTTALMDELKERRTFESPEEARARELVLGRLNLLVKEFVIKVSLALGMSDHVARE 75
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
T I T+GSY LGVHG SDID LC+ P T E FF +L MLK RPEV+E+ V +
Sbjct: 76 TGGKIFTFGSYRLGVHGPGSDIDTLCVVPRQVTR-EHFFEILPQMLKERPEVTELSTVPE 134
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP++ KF GI +DL +A L + SVP+++++ + L++LD+ +SL G R IL
Sbjct: 135 AFVPIISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDDRCVRSLGGSRVTDEIL 194
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+LVPD+E F+ LR IKLWAK R VY N+ GF GGV A+ A VCQ +P T+V
Sbjct: 195 RLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTARVCQLYPNKPAATIVNR 254
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAG----------YPSETRSLMPIRLPCSPHEYCHSNI 366
FF + W WP+PV+L+ G YP + MPI P P N+
Sbjct: 255 FFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIITPAYPCMCSTHNV 314
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD 426
T+ST + TEF RG T + W LFE + +Y ++++ S+ D
Sbjct: 315 TKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKHDFFTRYRNYIQITASSPEADAHLK 374
Query: 427 WVGWVKSRFRSLILKLEEVQGLCDPNP 453
W G V+SR R L+LK+EE++ + +P
Sbjct: 375 WAGTVESRLRLLVLKVEEIETVDMAHP 401
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D E + L++ + G+ EE +R ++QKL +V W++ ++ R
Sbjct: 26 PISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRN 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P DFF ++ LK + EV
Sbjct: 86 LPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVD-RNDFFTSFYDKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D E + L++ + G+ EE +R ++QKL +V W++ ++ R
Sbjct: 25 PISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P DFF ++ LK + EV
Sbjct: 85 LPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 264 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 324 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D E + L++ + G+ EE +R ++QKL +V W++ ++ R
Sbjct: 26 PISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRN 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P DFF ++ LK + EV
Sbjct: 86 LPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVD-RNDFFTSFYDKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 212/393 (53%), Gaps = 9/393 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+ S + ++E + +L++ + +G S +E R V+ ++ +V +V VA +
Sbjct: 18 PIATSESNPREKEVTRTLLEELKRQGTFESEDESKTREIVLGRIAALVKKFVHTVALREG 77
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L I T+GSY LGVHG SDID LC+ P+ + EDFF V +MLK V
Sbjct: 78 LSDAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFDVFEHMLKDAEGV 136
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V DA VP+++ K GI IDL A L + ++P+++ + + LR+LD+ +SL+G
Sbjct: 137 AEVSGVPDAYVPIIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLRNLDDRCVRSLNG 196
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 197 SRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 256
Query: 309 SLNTLVANFFKTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLMPIRLPCSPHE 360
+V+ FF W WP PV+L +D LP YP++ MPI P P
Sbjct: 257 VAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPIITPAYPSM 316
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+T+ST + EF + ++ W LF + KY +++V S +
Sbjct: 317 CATHNVTQSTQMIMTEEFKKASEIVDKVIINKASWSDLFARHDFFHKYRYYLQVIASTGS 376
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ W G V+SR R L++KLE V+ L +P
Sbjct: 377 PELQVKWSGTVESRVRQLVMKLEYVESLALAHP 409
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 205/373 (54%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + + + S E + R ++ KL +V W++ + R +P +
Sbjct: 43 DFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIRDTSIARNMPSSVAEQVG 102
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P + D+F +LK + EV+++ V++A
Sbjct: 103 GKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFFELLKMQEEVTDLRAVEEAF 161
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+L
Sbjct: 162 VPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCVRSLNGCRVTDEILRL 221
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ FF
Sbjct: 222 VPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFF 281
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P GYP S+ LMPI P P + N++ ST
Sbjct: 282 LVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVST 341
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
++ F G + T +++ W LFEP + KY ++ + + +D +W G
Sbjct: 342 RTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGL 401
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 402 VESKIRHLIGTLE 414
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 208/373 (55%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 42 DLTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNMPPNVAEQVG 101
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P + D+F ++LK + EV+++ V++A
Sbjct: 102 GKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFSSFFDLLKMQEEVTDLRAVEEAF 160
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+L
Sbjct: 161 VPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 220
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ FF
Sbjct: 221 VPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFF 280
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P G+P S+ LMPI P P + N++ ST
Sbjct: 281 LVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVST 340
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
++ F G + T +++ W LFEP + KY ++ + + + +D +W G
Sbjct: 341 RTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLSAEDQLEWCGL 400
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 401 VESKIRHLIGTLE 413
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 206/373 (55%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 43 DFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSVARNMPPNVAEQVG 102
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P + D+F +LK + EV+++ V++A
Sbjct: 103 GKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLKMQEEVTDLRAVEEAF 161
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+L
Sbjct: 162 VPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 221
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ FF
Sbjct: 222 VPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFF 281
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P G+P S+ LMPI P P + N++ ST
Sbjct: 282 LVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVST 341
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
++ F G + T +++ W LFEP + KY ++ + + +D +W G
Sbjct: 342 RTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGL 401
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 402 VESKIRHLIGTLE 414
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 205/373 (54%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + + + S E + R ++ KL +V W++ + R +P +
Sbjct: 39 DFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIRDTSIARNMPSSVADQVG 98
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P + D+F +LK + EV+++ V++A
Sbjct: 99 GKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFFELLKMQEEVTDLRAVEEAF 157
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+L
Sbjct: 158 VPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCVRSLNGCRVTDEILRL 217
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ FF
Sbjct: 218 VPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFF 277
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P GYP S+ LMPI P P + N++ ST
Sbjct: 278 LVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVST 337
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
++ F G + T +++ W LFEP + KY ++ + + +D +W G
Sbjct: 338 RTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGL 397
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 398 VESKIRHLIGTLE 410
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 208/382 (54%), Gaps = 18/382 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+L+Q + N G S + KR V+ +++V +V V+ + + + + T+
Sbjct: 27 TLIQELKNRGSFESEQATKKRVEVLTLFQQLVQEFVYTVSKSKNMSDAMAQDAGGKVFTF 86
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ T +DFF V ++++ RPE+ EI CV DA VP+++
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFADIIRKRPELEEIACVPDAYVPIIKI 145
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+FDGI IDL A L++ VP ++ + + L++LDE +SL+G R ILQLVP
Sbjct: 146 EFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVPKPTV 205
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LRCIK+WA++R VYGN+ GF GGV A+LVA +CQ +P + +V FF Y W
Sbjct: 206 FKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKFFNIYTKW 265
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P L YP + MP+ P P NIT ST
Sbjct: 266 NWPEPVLLKSIEDGPLQVRVWNPRL----YPHDRLHRMPVITPAYPSMCATHNITSSTQK 321
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA-SNQDDLGDWVGWV 431
I E RG + +D+ W LFE + KY ++ V + + ++ W G++
Sbjct: 322 VILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKKWSGFI 381
Query: 432 KSRFRSLILKLEEVQGLCDPNP 453
+S+ R L+LKLE +G+ +P
Sbjct: 382 ESKLRQLVLKLEVAEGVEIAHP 403
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 222/420 (52%), Gaps = 41/420 (9%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + +D ++S L + L EE R V+ KL IV W +V+ +
Sbjct: 82 PISLASPTSIDTKQSTELETTLRGFNLFEPPEESRLREEVLGKLDAIVKQWAIKVSVLKG 141
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
++ +E A I TYGSY LGVH S SDID LC+ P+ M DFF L ++L PE+
Sbjct: 142 FTEQMASEVIAKIFTYGSYRLGVHASGSDIDTLCVTPKH-IMRADFFGTLADVLCVHPEI 200
Query: 189 SE---------------------------------IHCVKDAKVPLMRFKFDGILIDLPY 215
+E + VKDA VP+++ F GI IDL +
Sbjct: 201 TEFTVSTFFSGSSGSSGGSSSGSSGLQRILIKKTMVMPVKDAFVPVIKMIFCGIPIDLIF 260
Query: 216 ACLHVLSVPENV-DVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
A L + ++PE++ D+++ +L+++D+ SL+G R IL+LVP++ F+ LRCIKL
Sbjct: 261 ARLSIPAIPEDLNDLIDENYLKNVDDKCIVSLNGCRVTDQILRLVPNVTTFRMALRCIKL 320
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML-- 332
WA+RRGVY N+ G LGGV A+L A +CQ +P + +T++ FFK Y W WP+P++L
Sbjct: 321 WAQRRGVYSNVLGLLGGVSWALLTARICQLYPNAAPSTIINRFFKIYDGWKWPSPILLCQ 380
Query: 333 -QDPMLPAAGYPSETRS---LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL 388
QD AA ++ R LMPI P P N++RST +++EF RG T+ +
Sbjct: 381 IQDGGQLAAKVWNQKRDKSHLMPILTPAYPSMNSTYNVSRSTLSLLKSEFSRGAEITKKI 440
Query: 389 MRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
+ W L E + +Y ++++ +SA +D W GW++S+ R LI LE+ +
Sbjct: 441 DSGERKWTDLVEKGDFFTRYRFYLQIDVSAPEEDTHRKWEGWIESKLRILISNLEQTPNM 500
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 206/373 (55%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 43 DFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSVARNMPPNVAEQVG 102
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P + D+F +LK + EV+++ V++A
Sbjct: 103 GKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLKMQEEVTDLRAVEEAF 161
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI ID+ +A L + +P+++D+ + L++LD+ +SL+G R IL+L
Sbjct: 162 VPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 221
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAKR G+Y N+ G+LGGV A+LVA CQ +P TL+ FF
Sbjct: 222 VPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFF 281
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P G+P S+ LMPI P P + N++ ST
Sbjct: 282 LVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVST 341
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
++ F G + T +++ W LFEP + KY ++ + + +D +W G
Sbjct: 342 RTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGL 401
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 402 VESKIRHLIGTLE 414
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 215/393 (54%), Gaps = 9/393 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++ ++ ++SL++ + +G S EE R V+ +L ++ +V +++ Q
Sbjct: 15 PISVNESNEREKLVTVSLMEELRRQGTFESEEESKTREIVLGRLASLIKKFVHKISLQHG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG +DID LC+ P+ + EDFF L ML+ V
Sbjct: 75 LSEAAADAAGGKIFTFGSYRLGVHGPGTDIDTLCVVPKHVSR-EDFFEALEPMLRETEGV 133
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP++ K GI IDL A L + S+P+++ + + LR+LDE +SL+G
Sbjct: 134 TEVTGVPEAYVPIVTTKISGIPIDLTMARLALSSIPDDLTLQDDNLLRNLDERCIRSLNG 193
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++E F+ LRCIKLWA+++ +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 194 SRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGVAWAMLVARICQLYPSA 253
Query: 309 SLNTLVANFFKTYAYWPWPTPVML---QDPMLPAAG-----YPSETRSLMPIRLPCSPHE 360
+V+ FF W WP PV+L +D LP YP++ MPI P P
Sbjct: 254 VAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRSHRMPIITPAYPSM 313
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+++ST + EF +G ++ W LF + KY +++V S +
Sbjct: 314 CATHNVSQSTQMIMTEEFKKGSEIVEKVIMGTTQWSELFVKHDFFHKYRYYLQVIASTGD 373
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
D W G V+SR R L++KLE V L +P
Sbjct: 374 PDLHIKWAGTVESRIRQLVMKLEYVDSLTLAHP 406
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + LV+ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLXFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 209/392 (53%), Gaps = 19/392 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PLN + D+ S L + + GL S +E R V+ ++V WVK V +R
Sbjct: 14 PLNDAPPTAEDKRHSKELEEFLRASGLYESLDEAILREEVLGLFYQLVQIWVKGVCRRRN 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV----VLHNMLKS 184
L + + A + T+GSY LGVHG SD+D L +GP + DFF L +L
Sbjct: 74 L---NVEDARAHVYTFGSYRLGVHGPGSDMDTLVVGPRYVLREMDFFGNEKHCLQYLLSQ 130
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWK 244
P++++I V DA VP++ K+ G+ ID+ YA L ++++PE +D+ N LR DE + +
Sbjct: 131 TPDITDIQPVPDAFVPMIGIKYKGVQIDVLYASLAMVTLPEQLDLSNHAVLRGCDEATVR 190
Query: 245 SLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN 304
SL+G R IL+LVP+ + F+ LR +K WA RG+ N+ G+LGGV+LAI+VA +CQ
Sbjct: 191 SLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQL 250
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPC 356
+P+ +T++ FF WPWP + L+ P + G P ++ +LMP+ P
Sbjct: 251 YPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVITPA 310
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR----PDFDWHFLFEPFPYSKKYARFV 412
P N+ RST + EF +R DW LF P P+ ++ ++
Sbjct: 311 YPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQHTFYI 370
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
++ +SA ++ DL W GWV SR R L+ LE+
Sbjct: 371 QIEVSADSEQDLVLWDGWVSSRIRRLVRNLED 402
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 222/413 (53%), Gaps = 19/413 (4%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
+ P P +L P++ S + +E ++++++ + +G+ S E+ +R + ++
Sbjct: 1 MAPAEQPKYL--GITDPISVSPPTEAEEAATVAMMEELHRQGVFESAEDSKRRELALDRI 58
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+ +V++V R L + + T+GSY LGVH ESDID LC+ P+ + E
Sbjct: 59 SALTKKFVQKVTIARGLSEVTARNAGGKVYTFGSYRLGVHTPESDIDTLCVVPKHVSR-E 117
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF V ML+ P+V+E+ + +A VP+++ K GI ID+ A L + S+PE++ + +
Sbjct: 118 DFFDVFEPMLRESPDVTEVAGIPEAYVPIIKIKMFGIPIDILMARLALSSIPEDLSLQDS 177
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
LR+LD+ +SL+G R +L+LVP+++ F+ LRCIKLWA+R+ +Y N++GF GGV
Sbjct: 178 NILRNLDDRCVRSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGV 237
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAA 340
A+LVA VCQ +P + T+V FF WPWP PV+L+ +P L
Sbjct: 238 AWAMLVARVCQLYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKL--- 294
Query: 341 GYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFE 400
+P + MP+ P P N++ STF I E RG ++ W LFE
Sbjct: 295 -FPGDRAHRMPVITPVYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFE 353
Query: 401 PFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ KY F+++ S ++ + W V+++ R L+ KLE V+ L +P
Sbjct: 354 KHDFFHKYRYFLQIIASTASAEAQLMWAPNVEAKIRQLVSKLELVESLTLAHP 406
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 211/379 (55%), Gaps = 13/379 (3%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+++ ++SL++ + + S EE R V+ +L +V +V V+ + + ++
Sbjct: 31 EQQLTVSLMEELKRRNIFESPEEARAREIVLGRLDVLVKQFVINVSISLGMSEAVARDSG 90
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVHG +DID LC+ P T E FF VL ML RPEV+E+ V +A
Sbjct: 91 GKIFTFGSYRLGVHGPGADIDTLCVVPRHITR-EHFFEVLPAMLNDRPEVTELATVPEAF 149
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ KF I +DL +A L + S+P+++++++ L++LD+ +SL G R IL+L
Sbjct: 150 VPIIKLKFSSIEVDLLFARLALPSIPDSLELIDDALLKNLDDRCVRSLGGSRVTDEILRL 209
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VPD+ F+ LR IKLWAK R VY N+ GF GGV A+ VA VCQ +P T+V FF
Sbjct: 210 VPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAMCVARVCQLYPNKPAGTIVNRFF 269
Query: 319 KTYAYWPWPTPVMLQDPMLPAAG-----------YPSETRSLMPIRLPCSPHEYCHSNIT 367
+ W WP+PV+L+ P+ P YP + MPI P P NIT
Sbjct: 270 AVLSQWNWPSPVLLK-PIGPGPPGDQRRIWNPKIYPQDRGHRMPIITPAYPCMCSTHNIT 328
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
+ST + TEF RG T ++ W LF+ + +Y ++++ S+ N + W
Sbjct: 329 KSTAQIMMTEFKRGLAVTDEIATGTKPWAALFDKHDFFTRYRYYLQITASSPNAEIQLKW 388
Query: 428 VGWVKSRFRSLILKLEEVQ 446
G V++R R L++K+EEV+
Sbjct: 389 AGTVEARLRQLVMKVEEVE 407
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 211/395 (53%), Gaps = 17/395 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S D+ D S L + + G + EE + R V+ K+ V WV+ V+ +R+
Sbjct: 158 PISISGPDEFDIVMSAKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRVVSKRRQ 217
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+P ++ + T+GSY L VH +DID+LC+ P DFF + ML P
Sbjct: 218 MPDSEVQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDR-NDFFTSFYEMLAEDPNT 276
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V++A VP+++ K+ GI +D+ +A L + VPE+ + + LR+LDE S +SL+G
Sbjct: 277 TELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVRSLNG 336
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F LR IKLWAK G+Y N+ G+LGGV AILVA CQ +P
Sbjct: 337 CRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 396
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQD---------PMLPAAGYPSETRS-----LMPIRL 354
LV FF Y W WP PV+L++ P L + +RS LMPI
Sbjct: 397 GPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDRFHLMPIVT 456
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRV 414
P P + N+T+S+ I E G T D+M+ +W LFE + +Y F+ +
Sbjct: 457 PAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKAEWSALFEEVNFFSRYKHFLAL 516
Query: 415 Y-LSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
LSA+ QD+L W G V+S+ R LI LE + +
Sbjct: 517 LCLSATEQDELV-WCGLVESKIRFLIASLERRESI 550
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 218/398 (54%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D E + L++ + G+ EE +R ++QKL +V W++ ++ R
Sbjct: 25 PISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P DFF ++ LK + EV
Sbjct: 85 LPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +S +G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSFNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 264 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 324 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 210/395 (53%), Gaps = 17/395 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S D+ D S L + + G + EE + R V+ K+ V WV+ V+ +R+
Sbjct: 154 PISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRIVSKRRQ 213
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+P +I + T+GSY L VH +DID+LC+ P DFF + ML P
Sbjct: 214 MPDSEIQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDR-NDFFTSFYEMLAEDPNT 272
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V++A VP+++ K+ GI +D+ +A L + VPE+ + + LR+LDE S +SL+G
Sbjct: 273 TELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVRSLNG 332
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F LR IKLWAK G+Y N+ G+LGGV AILVA CQ +P
Sbjct: 333 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 392
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQD---------PMLPAAGYPSETRS-----LMPIRL 354
LV FF Y W WP PV+L++ P L + +RS LMPI
Sbjct: 393 GPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHLMPIVT 452
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRV 414
P P + N+T+S+ I E G T D+M+ W LFE + +Y F+ +
Sbjct: 453 PAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKTGWSALFEEVNFFSRYKHFLAL 512
Query: 415 Y-LSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
LSA+ QD+L W G V+S+ R LI LE + +
Sbjct: 513 LCLSATEQDELV-WCGLVESKIRFLIASLERRESI 546
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 221/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SAS
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 201/366 (54%), Gaps = 9/366 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + M G+ E R V+ KL +V W+ + Q+ LP I+ I T+G
Sbjct: 40 LTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIGELGEQKSLPPSIISAVGGKIFTFG 99
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DID+LC+ P + DFF LK + + + V+DA VP+++F+
Sbjct: 100 SYRLGVHTKGADIDSLCVAPRHVERS-DFFQSFSEKLKQQDGIKNLRAVEDAFVPVIKFE 158
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F IDL +A L + +P+N+D+ + LR+LD +SL+G R IL LVP+ E F
Sbjct: 159 FMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNGCRVTDEILHLVPNKENF 218
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 219 RLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 278
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP P++ LMPI P P + N++ ST + E
Sbjct: 279 WPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTYNVSISTRSVMVEE 338
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G + T +++ DW LFEP + KY ++ + SAS ++ +WVG V+S+ R
Sbjct: 339 FKQGLSVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHHLEWVGLVESKIRV 398
Query: 438 LILKLE 443
L+ LE
Sbjct: 399 LVGNLE 404
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 221/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SAS
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 221/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 25 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 264 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SAS
Sbjct: 324 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 202/377 (53%), Gaps = 18/377 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + N G S + KR V+ +++V +V V+ + + ++ + T+
Sbjct: 28 SLIQELKNRGSFESEQATKKRVEVLTLFQKLVQEFVYTVSKSKNMSDGMAKDSGGKVFTF 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ T +DFF V ++++ RPE+ EI CV DA VP+++
Sbjct: 88 GSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFPDIIRKRPELEEIACVPDAFVPIIKL 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+FDGI IDL A L+V VP + + + L++LDE +SL+G R ILQLVP
Sbjct: 147 EFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVPKPTV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LRCIKLWA++R VYGN++GF GGV A+LVA +CQ +P +V FF Y W
Sbjct: 207 FKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFSIYTKW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P L YP + MP+ P P NIT ST
Sbjct: 267 NWPEPVLLKSIEDGPLQVRVWNPRL----YPHDRLHRMPVITPAYPSMCATHNITSSTQK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLGDWVGWV 431
I E RG + D+ + W LF+ Y Y ++ V + + W G+V
Sbjct: 323 VILKELSRGSSIMNDINTGNKTWSDLFKRHEYFHAYKFYLCVVAATVDTSEQHKKWSGFV 382
Query: 432 KSRFRSLILKLEEVQGL 448
+SR R L+LKLE G+
Sbjct: 383 ESRLRQLVLKLEVTDGI 399
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + LV+ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 203/374 (54%), Gaps = 9/374 (2%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D + L + M G+ E R V+ KL +V W+ + Q+ LP I+
Sbjct: 31 IDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIAELGEQKSLPPTIISAA 90
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DID+LC+ P + DFF LK + + + V+DA
Sbjct: 91 GGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEKLKQQDGIKNLRAVEDA 149
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++F+F IDL +A L + +P+N+D+ + LR+LD +SL+G R IL
Sbjct: 150 FVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNGCRVTDEILH 209
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P +TLV F
Sbjct: 210 LVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAIASTLVHKF 269
Query: 318 FKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P LP P++ LMPI P P + N++ S
Sbjct: 270 FLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTYNVSIS 329
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T + EF +G T +++ DW LFEP + KY ++ + SAS ++ +WVG
Sbjct: 330 TRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHHLEWVG 389
Query: 430 WVKSRFRSLILKLE 443
V+S+ R L+ LE
Sbjct: 390 LVESKIRVLVGNLE 403
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 203/374 (54%), Gaps = 9/374 (2%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D + L + M G+ E R V+ KL +V W+ + Q+ LP I+
Sbjct: 32 IDHIYTQKLTEAMGPFGVFEDDAELSHRMVVLGKLNNLVKEWIAELGEQKSLPPTIISAA 91
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DID+LC+ P + DFF LK + + + V+DA
Sbjct: 92 GGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEKLKQQDGIKNLRAVEDA 150
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++F+F IDL +A L + +P+N+D+ + LR+LD +SL+G R IL
Sbjct: 151 FVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNGCRVTDEILH 210
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P +TLV F
Sbjct: 211 LVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAIASTLVHKF 270
Query: 318 FKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P LP P++ LMPI P P + N++ S
Sbjct: 271 FLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTYNVSIS 330
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T + EF +G T +++ DW LFEP + KY ++ + SAS ++ +WVG
Sbjct: 331 TRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHHLEWVG 390
Query: 430 WVKSRFRSLILKLE 443
V+S+ R L+ LE
Sbjct: 391 LVESKIRVLVGNLE 404
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 219/397 (55%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S + ++E +++L++ + +G+ S EE R V+ +L ++ +VKRV+ R
Sbjct: 13 PISTSESNPREKEVTVTLLEELRRQGIFESEEEAKMREIVLGRLAALIKKFVKRVSLARG 72
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG +DID LC+ P T EDFF VL ML+ V
Sbjct: 73 LSESAANSAGGKIYTFGSYRLGVHGPGTDIDTLCVVPRHVTR-EDFFNVLEGMLREMEGV 131
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP+++ + GI IDL +A L + ++P+++D+ + L++LDE +SL+G
Sbjct: 132 TEVSGVPEAFVPIIKTEISGIPIDLLFAQLSLAAIPDDLDLRDDNLLKNLDERCVRSLNG 191
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 192 SRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 251
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+V+ FF W WP PV+L+ +P L YP + MPI P
Sbjct: 252 VAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRL----YPQDRNHRMPIITPA 307
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+ ST + EF RG ++ + W LF + +Y +++V
Sbjct: 308 YPSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFRYRFYLQVIA 367
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S+ + D W G V+S+ R L+++LE V L +P
Sbjct: 368 SSPDLDTQNKWSGTVESKIRQLVMRLEFVDTLKLAHP 404
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 227/440 (51%), Gaps = 42/440 (9%)
Query: 108 VIQKLKEIVLAWVKRV-AWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPE 166
V+ +L IV WV +V + +P + E + T+GSY LGVHG +DID LC+ P
Sbjct: 101 VLARLDSIVKQWVIQVLTAKNEMPPD--TEPGGKVFTFGSYRLGVHGRGADIDTLCIAPR 158
Query: 167 FATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGI-----------LIDLPY 215
T +DFF L +L+ + E SE+ V A P++ KF G+ IDL +
Sbjct: 159 GVTR-DDFFQSLVELLREQSETSELTPVTGAFTPIITLKFSGVDNRSLASSAPLKIDLLF 217
Query: 216 ACL-HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
A L VLSV EN++V++ LR+ D + +S++G R ILQLVPD + F+ LR IKL
Sbjct: 218 AELPGVLSVSENLNVMDNAILRNCDMATVRSVNGSRVANYILQLVPDRDNFRMALRAIKL 277
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV---- 330
WA RGVY N GFLGG+ AILVA CQ +PK S +T+VA FF+ + W WPTPV
Sbjct: 278 WANNRGVYSNKLGFLGGIAWAILVARTCQLYPKSSASTIVARFFRVFHNWSWPTPVWLKA 337
Query: 331 MLQDPMLPAAGY-----PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
M +D L + S+ R LMPI P P N++ ST + EF RG T
Sbjct: 338 MEEDRSLALPNWNPVINASDARHLMPIITPAYPSMNSTHNVSMSTLRVMTEEFARGMQVT 397
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYL-SASNQDDLGDWVGWVKSRFRSLILKLEE 444
D+ W LFE + +Y ++++ + NQD+ W G+V+S+ R + LE
Sbjct: 398 LDIEVGKVGWPVLFEKNNFFTRYKTYIQISARTEENQDEHRQWEGFVESKLRMFLQWLES 457
Query: 445 VQGL--CDPNPTEYIDVDVTEPH-----IVFYWGL--------QPGRTNLLDIVAVEKDF 489
G+ P P + D TE +FY+G+ P L +IV ++
Sbjct: 458 APGVDYVHPYPKTFSQTDTTESGQPVYLTIFYFGMMFKKQEGTDPRVIELGNIVRDFREA 517
Query: 490 LKNIHNGFQGSPGRMGLLVV 509
+KN + F +P R+ L+V+
Sbjct: 518 IKNQNASFVNNP-RVDLVVL 536
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V+ KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREISESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SAS
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V+ KL +V W++ ++ +
Sbjct: 25 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREISESKS 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 264 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SAS
Sbjct: 324 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 201/373 (53%), Gaps = 9/373 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + GL S +E R V+ K+ E+V W+ V+ ++ +P
Sbjct: 42 DVARTRDLEDTLRQFGLFESADELAHRMEVLSKINELVKQWIYDVSVKKNMPPSVAENVG 101
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DID LC+ P DFF +L+ + EV ++ V++A
Sbjct: 102 GKIYTFGSYRLGVHTKGADIDTLCVAPRHVDRT-DFFSSFVELLRQQEEVKDLRAVEEAF 160
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ F GI +D+ +A L + +PE D+ + L++LD +SL+G R IL L
Sbjct: 161 VPVIKMTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDPKCVRSLNGCRVTDEILHL 220
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+ E F+ LR IKLWAK+ GVY N+ G+LGGV A+LVA CQ +P + TLV FF
Sbjct: 221 VPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVARTCQLYPNAAAATLVHKFF 280
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ WPWP PV+L+ P G+P ++ LMPI P P + N++ ST
Sbjct: 281 LVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITPAYPQQNSTFNVSVST 340
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+R EF +G T ++M +W LFEP + KY F+ + + ++ +W G
Sbjct: 341 RTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPNFFGKYKHFIVLMATTMTKEHHLEWYGL 400
Query: 431 VKSRFRSLILKLE 443
V+S+ R LI LE
Sbjct: 401 VESKIRILISNLE 413
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 217/397 (54%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ SV + ++E +++L+ + + + + +E R V+ ++ ++V +V +VA R
Sbjct: 15 PISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKVALLRG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG SDID LC+ P+ T +DFF +L+ V
Sbjct: 75 LSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-DDFFEYFEPLLRELDGV 133
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP+++ K GI +DL A + + ++P+++ + + LR++DE +SL G
Sbjct: 134 TEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIRSLGG 193
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R +L+LVPD++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 194 SRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 253
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+ +V+ FF W WP PV+L+ +P L YPS+ MPI P
Sbjct: 254 TAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKL----YPSDRSHRMPIITPA 309
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T ST + EF +G + ++ W LF + KY +++V
Sbjct: 310 YPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIA 369
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S N D W G V+SR R LI+KLE V+ L +P
Sbjct: 370 STGNSDLQIKWAGTVESRIRQLIMKLEYVESLTLAHP 406
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 38 PISLAAPKEIDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 97
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 98 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEV 156
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 157 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 216
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 217 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 276
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 277 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 337 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 396
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 397 EKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF 434
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 209/374 (55%), Gaps = 10/374 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAW-QRRLPKEQIAET 137
D +++ L + + + S E + R V+ KL +V W+ ++ Q+ +PK +
Sbjct: 45 DIQKTKELEEALKPFNVFESDAELNFRMEVLSKLNNLVKEWIIDISVNQKNMPKNVAEQV 104
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH +DIDALC+ P + D+F + +LK + EVS++ V++A
Sbjct: 105 GGKIYTFGSYRLGVHQKGADIDALCVAPRHIDRS-DYFTSFYELLKEQKEVSQLRSVENA 163
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ FDGI IDL +A L + +P+++D+ + + L++LD+ +SL+G R IL+
Sbjct: 164 FVPVIKMNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQKCVRSLNGCRVTDEILR 223
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP+ E F+ LR IKLWAK+ VY N G+LGGV A+LVA CQ +P TLV F
Sbjct: 224 LVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVARTCQLYPNAVAATLVHKF 283
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ P +P S+ LMPI P P + N++ S
Sbjct: 284 FLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSLS 343
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T ++ E G + T D+M W LFE + KY ++ + LS+++ +D +W G
Sbjct: 344 TRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFFSKYRHYIVLLLSSNSPEDQLEWCG 403
Query: 430 WVKSRFRSLILKLE 443
V+S+ R L+ LE
Sbjct: 404 LVESKIRLLVGNLE 417
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 217/397 (54%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ SV + ++E +++L+ + + + + +E R V+ ++ ++V +V +VA R
Sbjct: 15 PISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKVALLRG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG SDID LC+ P+ T +DFF +L+ V
Sbjct: 75 LSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-DDFFEYFEPLLRELDGV 133
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP+++ K GI +DL A + + ++P+++ + + LR++DE +SL G
Sbjct: 134 TEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIRSLGG 193
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R +L+LVPD++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 194 SRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 253
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+ +V+ FF W WP PV+L+ +P L YPS+ MPI P
Sbjct: 254 TAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKL----YPSDRSHRMPIITPA 309
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T ST + EF +G + ++ W LF + KY +++V
Sbjct: 310 YPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIA 369
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S N D W G V+SR R LI+KLE V+ L +P
Sbjct: 370 STGNSDLQIKWAGTVESRIRQLIMKLEYVESLTLAHP 406
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 211/389 (54%), Gaps = 13/389 (3%)
Query: 67 NFPLNPSVLDQMDEERSL----SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKR 122
+ L + + + EE +L L+ M + + + E + R V ++L+ + W+K
Sbjct: 4 TYGLTGPISEDLPEEENLIQTRKLLDTMKSYNVYENNLEFEHRERVFRRLESLFRDWLKE 63
Query: 123 VAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNML 182
+ + +P+ + I +GSY LGVH +DIDALC+GP F + FF L
Sbjct: 64 ICIEMNVPEVVTEKVGGKIFPFGSYHLGVHSKGADIDALCVGPGFLER-KAFFTSFFAKL 122
Query: 183 KSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETS 242
K++ EV +I +++A VP++ ++GI IDL +A L SVP+N+D+LN ++D+D
Sbjct: 123 KAQKEVKDIQAIEEAYVPVITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDIRC 182
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+S +G R + IL+LVP++ F+ LR IKLWAK+R +Y N GFLGGV AI+VA +C
Sbjct: 183 VRSFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVARIC 242
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD--------PMLPAAGYPSETRSLMPIRL 354
Q +P + +TLV FFK ++ W WP P+ L + P S+ LMPI
Sbjct: 243 QVYPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIIT 302
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRV 414
P P + N++RST + E RGH +++ + W LFE + +KY + +
Sbjct: 303 PAYPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDFFQKYQHYAVL 362
Query: 415 YLSASNQDDLGDWVGWVKSRFRSLILKLE 443
S + ++ +WVG V+S+ R L+ LE
Sbjct: 363 EASYTTEEKCLEWVGLVESKIRLLVSTLE 391
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 39 LIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 98
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 99 SYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLC 157
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 158 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 217
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 218 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 277
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 278 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 337
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 338 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 397
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 398 LVGNLEKNEFITLAHVNPQSF 418
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 41 LIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 100
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 101 SYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLC 159
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 160 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 219
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 220 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 279
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 280 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 339
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 340 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 399
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 400 LVGNLEKNEFITLAHVNPQSF 420
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 210/406 (51%), Gaps = 21/406 (5%)
Query: 64 PSFNFPLNPSVLDQMDEERSL----SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAW 119
P+ N + P + R + +LV + +G+ S EE R ++ KL +V +
Sbjct: 16 PTRNLGVTPPIATNGPTSREIEVTKTLVAELEKQGVFESDEESKIREVILGKLDAMVKDF 75
Query: 120 VKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLH 179
V RV+ + + I T+GSY LGVHG SDID LC+ P+ EDFF V
Sbjct: 76 VYRVSISHGMSETLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKH-VQREDFFSVFE 134
Query: 180 NMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLD 239
+MLK R EV+E+ V A VPL+ KF G+ ID +A L + V +N+ + + LR+LD
Sbjct: 135 SMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRNLD 194
Query: 240 ETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA 299
E +SL G R IL+LVP++ F+ LRCIKLWA+RR +Y N+ GFLGGV A+L A
Sbjct: 195 ERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTA 254
Query: 300 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETR 347
+CQ +P + +V+ FF W WP PV+L +P L YPS+
Sbjct: 255 RICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKL----YPSDRL 310
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
MPI P P N+++ST + +EF R ++ +W LF + K
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDFFFK 370
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
Y +++V S+ + D W G V+S+ R L++KLE V + +P
Sbjct: 371 YKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHP 416
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV+ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV+ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV+ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 39 LVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 98
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 99 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 157
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 158 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 217
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 218 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 277
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 278 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 337
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 338 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 397
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 398 LVGSLEKNEFITLAHVNPQSF 418
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 212/380 (55%), Gaps = 17/380 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LVQ + + G S EE KR V+ K+ I +V+ V+ + LP+ + I T+G
Sbjct: 47 LVQTLRDYGQYESEEEAQKREIVLGKIDAIFKEFVRSVSIKNGLPESLANDVGGKIFTFG 106
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG +SDID LC+ P+ EDF ++ +LK+R EVSEI V DA VP+++ +
Sbjct: 107 SYRLGVHGKKSDIDTLCVAPKHVKR-EDFLEYMYELLKARQEVSEITAVADAYVPIIKLE 165
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F I IDL +A L + +V E++D+ + L++LD+ +SL+G R IL+LVP++E F
Sbjct: 166 FSDISIDLVFARLALPTVSEDLDLSDDSLLKNLDDRCIRSLNGSRVTDDILRLVPNVETF 225
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LRCIKLWA +R +Y N+ GF GGV AIL+A VCQ +P + +V+ FF+ W
Sbjct: 226 RIALRCIKLWALQRAIYSNVMGFFGGVAWAILIARVCQLYPCAAAGEVVSKFFQIMYRWE 285
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P + YP + MPI P P N+T ST
Sbjct: 286 WPLPVLLKPIEEGPLAVRVWNPKI----YPQDKAHRMPIITPAYPSMCSTHNVTVSTQTV 341
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
EF R TT +M W LF+ + +Y +++V S+++ + W G+V+S
Sbjct: 342 TTQEFERAAVTTDKIMLGREKWTVLFQKNDFFHRYKYYLQVIASSNDDEKQLMWAGFVES 401
Query: 434 RFRSLILKLEEVQGLCDPNP 453
R R L++KLE + L +P
Sbjct: 402 RLRQLVMKLELAENLDIAHP 421
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 209/392 (53%), Gaps = 19/392 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PLN S+ D+ S L Q + + GL E+ R+ V+ E+ WVK V ++
Sbjct: 14 PLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYELTQTWVKGVCRKKN 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV----VLHNMLKS 184
L + + A + T+GSY LGVHG +D+D L +GP + DFF L ML
Sbjct: 74 L---NVEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGSEKHCLEYMLSQ 130
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWK 244
P++++I V DA VP++ K+ G+ ID+ YA L + ++PE +D+ N LR DE + +
Sbjct: 131 TPDITDIQPVPDAFVPMIGIKYKGVQIDILYASLAMQTLPEQLDLSNHAVLRGCDEPTVR 190
Query: 245 SLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN 304
+L+G R +L+LVP E F+ LR +K WA RG+ N+ G+LGGV+LAI+VA +CQ
Sbjct: 191 ALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQL 250
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPC 356
+P+ +T++ FF WPWP + L+ P + G P ++ +LMP+ P
Sbjct: 251 YPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPVITPA 310
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR----PDFDWHFLFEPFPYSKKYARFV 412
P N+ RST + EF + + +W LF P P+ +++ ++
Sbjct: 311 YPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPFFTQHSFYI 370
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
++ +SA ++ DL W GWV SR R L+ LE+
Sbjct: 371 QLEVSADSEGDLVLWDGWVSSRIRRLVRNLED 402
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV+ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 217/418 (51%), Gaps = 24/418 (5%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
DE+ S +L + E + +E +R V+ ++ ++ WV +A R +
Sbjct: 35 DEKLSKALDDKLREEDVYEDADECVRREEVLGEINALLQDWV--LAASERKGITEDMRPS 92
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV--------VLHNMLKSRPEVSE 190
+ T+GSY LGVHG +DID LCLGP + EDFF +++++ P
Sbjct: 93 CNLYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGWDENDYEGSFYDVMRKHPGTES 152
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
I V+DA VP ++ F G ID+ Y L VPE++DV + +LD+ KSL+G
Sbjct: 153 IVPVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLDVCQTSVMMNLDDPGVKSLNGC 212
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R +L++VP+ + F+ LR ++LWA+RRGVY N+ GF GGV+LAILVA VCQ +P +
Sbjct: 213 RVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGVNLAILVARVCQLYPNAA 272
Query: 310 LNTLVANFFKTYAYWPWPTPVML---QDPMLPAAGY------PSETRSLMPIRLPCSPHE 360
+ LV +FF+ ++ W W TPVML D LP +E LM I P P +
Sbjct: 273 PSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQ 332
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST ++ EF RG T+ ++ W L+ + +KY ++ V +SA N
Sbjct: 333 NSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLWCSLNFLEKYKHYLMVTISAKN 392
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTE-PHIVFYWGLQP 474
+DD W GWV SR + LI +E G L P + Y D + E H+ + GL P
Sbjct: 393 EDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENSHVTLFLGLFP 450
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV+ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 58 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 117
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 118 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 176
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 177 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 236
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 237 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 296
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 297 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 356
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 357 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 416
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 417 LVGSLEKNEFITLAHVNPQSF 437
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 219/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE R +++KL +V W++ ++ R
Sbjct: 26 PISLAAPKETDCALTQKLIETLRPFGVFEEEEELQSRILILEKLNNLVKEWIREISESRS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ + + T+GSY LGVH +DIDALC+ P + DFF ++ LK R EV
Sbjct: 86 LPEAVVESVGGRLFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLREEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDG+ ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 RDLRAVEEAFVPVIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVPD++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 225/412 (54%), Gaps = 11/412 (2%)
Query: 55 PCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKE 114
P +P+ + P++ +V + D + L++ + G+ EE +R V++KL
Sbjct: 12 PQQAPLPKCYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNN 71
Query: 115 IVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDF 174
+V W++ ++ + LP+ I I T+GSY LGVH +DIDALC+ P + DF
Sbjct: 72 LVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DF 130
Query: 175 FVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFF 234
F + LK + EV ++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ +
Sbjct: 131 FTSFYVKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 190
Query: 235 LRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHL 294
L++LD +SL+G R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV
Sbjct: 191 LKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSW 250
Query: 295 AILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSET 346
A+LVA CQ +P +TLV FF ++ W WP PV+L++P LP PS+
Sbjct: 251 AMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDR 310
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSK 406
LMPI P P + N++ ST + EF +G T +++ +W LFE + +
Sbjct: 311 YHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQ 370
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
KY ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 371 KYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 225/412 (54%), Gaps = 11/412 (2%)
Query: 55 PCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKE 114
P +P+ + P++ +V + D + L++ + G+ EE +R V++KL
Sbjct: 12 PQQAPLPKCYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNN 71
Query: 115 IVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDF 174
+V W++ ++ + LP+ I I T+GSY LGVH +DIDALC+ P + DF
Sbjct: 72 LVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DF 130
Query: 175 FVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFF 234
F + LK + EV ++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ +
Sbjct: 131 FTSFYVKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 190
Query: 235 LRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHL 294
L++LD +SL+G R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV
Sbjct: 191 LKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSW 250
Query: 295 AILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSET 346
A+LVA CQ +P +TLV FF ++ W WP PV+L++P LP PS+
Sbjct: 251 AMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDR 310
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSK 406
LMPI P P + N++ ST + EF +G T +++ +W LFE + +
Sbjct: 311 YHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQ 370
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
KY ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 371 KYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 218/398 (54%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 135 PISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 194
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 195 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEV 253
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 254 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 313
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 314 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 373
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 374 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 433
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 434 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 493
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 494 EKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF 531
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 39 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 98
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 99 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 157
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 158 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 217
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 218 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 277
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 278 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 337
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 338 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 397
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 398 LVGSLEKNEFITLAHVNPQSF 418
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 39 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 98
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 99 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 157
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 158 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 217
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 218 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 277
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 278 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 337
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 338 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 397
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 398 LVGSLEKNEFITLAHVNPQSF 418
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ E +R V++KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTQRLIETLRPFGVFEEEGELQRRILVLEKLNNLVKEWIREISESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SAS
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIILLASAST 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 58 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 117
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 118 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 176
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 177 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 236
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 237 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 296
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 297 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 356
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 357 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 416
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 417 LVGSLEKNEFITLAHVNPQSF 437
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 39 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 98
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 99 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 157
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 158 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 217
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 218 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 277
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 278 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 337
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 338 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 397
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 398 LVGSLEKNEFITLAHVNPQSF 418
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 213/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R +++KL +V W++ ++ + LP+ I I T+G
Sbjct: 43 LIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFG 102
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 103 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 161
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 162 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 221
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 222 RLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWE 281
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L++P LP PS+ LMPI P P + N++ ST + E
Sbjct: 282 WPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEE 341
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 342 FKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRI 401
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 402 LVGSLEKNEFITLAHVNPQSF 422
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 200/381 (52%), Gaps = 18/381 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+Q + EG S +E KR V++ +++ +V RV+ + + ++ + T+G
Sbjct: 29 LIQELKKEGSFESEQETAKRVKVLEIFQQLAQEFVYRVSKSKNMSDGMAKDSGGKVFTFG 88
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID L + P+ T EDFF V +L+ R E+ EI V DA VP+++ K
Sbjct: 89 SYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDELLRKRKELEEIAPVPDAYVPIIKTK 147
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI IDL A L V VP+ + + + LR+LDE ++L+G R IL+LVP F
Sbjct: 148 FDGISIDLICARLDVAQVPQTLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPIVF 207
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWA+RR VYGN+ GF GGV A+LVA +CQ +P ++ FFK + W
Sbjct: 208 RIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILSEWK 267
Query: 326 WPTPVMLQDPMLPAAGYPSETR------------SLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ P P + R MP+ P P NIT ST
Sbjct: 268 WPQPVVLK----PIEDGPLQVRVWNPKIYAQDRCHRMPVITPAYPSMCATHNITESTKKV 323
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWVK 432
I EF RG T ++ W LF+ + Y ++ V S D+ W G V+
Sbjct: 324 ILKEFERGVEITNNIFSNKATWEDLFKRHTFFHDYKFYLTVTASTKGNDEQHLKWSGLVE 383
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R LILKLE + G+ +P
Sbjct: 384 SKVRLLILKLEALPGIKSAHP 404
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 45 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 104
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 105 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 163
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 164 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 223
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 224 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 283
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 284 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 343
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 344 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 403
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 404 LVGSLEKNEFITLAHVNPQSF 424
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 140 LIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 199
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 200 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 258
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 259 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 318
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 319 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 378
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 379 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 438
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 439 FKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 498
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 499 LVGSLEKNEFITLAHVNPQSF 519
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 58 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 117
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 118 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 176
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 177 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 236
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 237 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 296
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 297 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 356
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 357 FKQGPAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 416
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 417 LVGSLEKNEFITLAHVNPQSF 437
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 69 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 128
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 129 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 187
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 188 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 247
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 248 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 307
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 308 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 367
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 368 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 427
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 428 LVGSLEKNEFITLAHVNPQSF 448
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 207/372 (55%), Gaps = 17/372 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + + GL S +E KR V+ KL ++V +V +V+ + P E I TYG
Sbjct: 31 LLETLKSYGLFESEQEAQKRVVVLGKLDKLVKEFVYKVSKMKGFPDSLAREAGGKIFTYG 90
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG+ +DID LC+ P+ E FF ++++MLK RPEV+EI V DA VP+++
Sbjct: 91 SYRLGVHGAGADIDTLCVFPKHVE-REHFFTIMYDMLKERPEVTEISAVPDAYVPVIKMH 149
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F GI ID A L V VP+++++ + L++LDE +SL+G R IL+LVP++ F
Sbjct: 150 FSGIPIDFICARLAVARVPDDLELADNNILKNLDERCVRSLNGSRVTDDILRLVPNVATF 209
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAK + +Y N+ GFLGGV A+L+A +CQ +P ++V FF W
Sbjct: 210 RIALRTIKLWAKCKAIYSNVMGFLGGVAWAMLIARICQLYPNACAASIVNRFFLIMYQWK 269
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P L YP++ MPI P P N+T ST
Sbjct: 270 WPQPVLLRPLEDGPLQVRVWNPKL----YPADRSHRMPIITPAYPSMCATHNVTESTRKI 325
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
+ EF G + +++ W LF + +++ ++++ S+ + + W G V++
Sbjct: 326 MIQEFKNGIDVASNIILGSGQWSDLFVKSDFFQQFKHYLQITSSSYSSETQLMWSGLVEA 385
Query: 434 RFRSLILKLEEV 445
+ R L+LKLE V
Sbjct: 386 KLRQLVLKLETV 397
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 43 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 102
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 103 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLC 161
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 162 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 221
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 222 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 281
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 282 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 341
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 342 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 401
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 402 LVGSLEKNEFITLAHVNPQSF 422
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 206/392 (52%), Gaps = 20/392 (5%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D + S + + G EE R V+ KL +V +V R+A +
Sbjct: 15 PLSMKESTEEDVKLSEEMDMYLQERGFFEDDEEGQTRERVLGKLNFMVKEFVARMAKNKG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ A I T+GSY LGVHG +DIDALC+ P T DFF + LK P +
Sbjct: 75 NGDGEKA-YGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVT-RNDFFTYFYEELKGDPNI 132
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ ++DA VP+++F+F GI IDL +A L+V V + +++LN L+ +DE SL+G
Sbjct: 133 KGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNG 192
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R +L LVP+++ F LRCIK WAKRR VYGN +G+ GGV ++ VA VCQ +P
Sbjct: 193 SRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNA 252
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
S T+V FF+ ++ W WPTPV+L+ DP + YPS+ MP+ P
Sbjct: 253 SSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKV----YPSDKYHRMPVITPA 308
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N++ ST + I EF R H +L + DF +FE + +Y FV V
Sbjct: 309 YPSMCATHNVSNSTQHVITMEFSRAHEILSNLEKNDF--RRIFELSDFFGRYKLFVEVLA 366
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
++ ++ W G+V+SR R L K E V +
Sbjct: 367 MSTLEEGFTKWEGYVESRIRILASKFEAVDDI 398
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 55 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 114
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 115 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 173
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 174 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 233
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 234 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 293
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 294 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 353
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 354 FKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 413
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 414 LVGSLEKNEFITLAHVNPQSF 434
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV+ + G+ EE +R ++ KL +V W++ + + LP+ I I T+G
Sbjct: 42 LVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIRESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 55 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 114
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 115 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 173
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 174 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 233
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 234 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 293
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 294 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 353
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 354 FKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 413
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 414 LVGSLEKNEFITLAHVNPQSF 434
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 49 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 108
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 109 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 167
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 168 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 227
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 228 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 287
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 288 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 347
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 348 FKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 407
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 408 LVGSLEKNEFITLAHVNPQSF 428
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV+ + G+ EE +R ++ KL +V W++ + + LP+ I I T+G
Sbjct: 42 LVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIRESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTRRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREMSESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVTENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFASFYAKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SAS
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 23 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 82
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ + I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 83 LPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYAKLKLQEEV 141
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 142 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 201
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 202 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 261
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 262 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 321
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 322 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 381
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 382 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 419
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 215/401 (53%), Gaps = 18/401 (4%)
Query: 60 VFLVPSFNFP--LNPSVLDQ---MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKE 114
+ + P+ N+P +P L+ +D + S L + M G+ S EE R +V+ K+
Sbjct: 8 IIMEPAKNYPGITSPISLEGPKPVDLKLSEKLEEAMRPHGVFESEEEMSHRMDVLHKINT 67
Query: 115 IVLAWVKRVAWQRR-LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAED 173
+V W+K V+ Q+ P+++I + T+GSY LGVH +DID LC+ P + D
Sbjct: 68 LVREWIKDVSRQKNNYPEDKIDAFGGKVCTFGSYRLGVHTKGADIDTLCVAPRHVDRS-D 126
Query: 174 FFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPF 233
FF +LK+ PEV ++ V++A VP+++ FDGI +D+ +A L + +PE +D+ +
Sbjct: 127 FFSSFFEILKNTPEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALPQIPEEIDLRDES 186
Query: 234 FLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVH 293
L++L+E +SL+G R IL LVP+ F+ LR IKLWAK++G+Y N GFLGGV
Sbjct: 187 LLKNLNEKCVRSLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGVS 246
Query: 294 LAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD-----------PMLPAAGY 342
A+LVA VCQ +P + TL+ FF W WP PV+L+ P+
Sbjct: 247 WAMLVARVCQLYPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVN 306
Query: 343 PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPF 402
S+ LMPI P P + N+T ST + E G + +W LFEP
Sbjct: 307 TSDRFHLMPIITPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEPS 366
Query: 403 PYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ +KY ++ + SA + D +W G+V+S+ R L+ LE
Sbjct: 367 NFFQKYKHYIVLTASAVEEKDYLEWHGYVESKIRLLVGNLE 407
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 210/406 (51%), Gaps = 21/406 (5%)
Query: 64 PSFNFPLNPSVLDQMDEERSL----SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAW 119
P+ N + P + R + +LV + +G+ S EE R ++ KL +V +
Sbjct: 16 PTRNLGVTPPIAANGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDF 75
Query: 120 VKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLH 179
V RV+ + + I T+GSY LGVHG SDID LC+ P+ EDFF V
Sbjct: 76 VYRVSIANGMSESLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKH-VQREDFFSVFE 134
Query: 180 NMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLD 239
MLK R EV+E+ V A VPL+ KF G+ ID +A L + V +++ + + LR+LD
Sbjct: 135 TMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLLRNLD 194
Query: 240 ETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA 299
E +SL G R IL+LVP++ F+ LRCIKLWA++R +Y N+ GFLGGV A+L A
Sbjct: 195 ERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWAMLTA 254
Query: 300 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETR 347
+CQ +P + +V+ FF + W WP PV+L +P L YPS+
Sbjct: 255 RICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKL----YPSDRL 310
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
MPI P P N+++ST + +EF R ++ DW LF + K
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDFFFK 370
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
Y +++V S+ + D W G V+S+ R L++KLE V + +P
Sbjct: 371 YKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHP 416
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 210/397 (52%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++E + +L+Q + + S EE R V+ +L +V A+V++V+ R
Sbjct: 13 PISTTESSAREKEVTGTLMQELRRQKTFESEEEAKTREIVLGRLAALVKAFVRKVSLSRG 72
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG SDID LC+ P+ + EDFF V ML+ V
Sbjct: 73 LSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKH-VLREDFFDVFEQMLRETEGV 131
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E V +A VP+++ K GI ID A L + ++P+++ + + LR+LD+ +SL G
Sbjct: 132 TECSGVPEAYVPIVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDDRCIRSLGG 191
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 192 SRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 251
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+V+ FF W WP PV+L+ +P L YP + MPI P
Sbjct: 252 IAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKL----YPGDRSHRMPIITPA 307
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T ST + EF +G + ++ W LF + KY ++++
Sbjct: 308 YPAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDFFHKYRYYLQIIA 367
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S + W G V+SR R L++KLE V+ L +P
Sbjct: 368 STGDPALQIKWAGTVESRLRQLVMKLEFVESLQLAHP 404
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 55 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 114
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 115 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 173
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 174 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 233
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 234 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 293
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 294 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 353
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 354 FKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 413
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 414 LVGSLEKNEFITLAHVNPQSF 434
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 135 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 194
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 195 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 253
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 254 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 313
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 314 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 373
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 374 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 433
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 434 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 493
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 494 LVGSLEKNEFITLAHVNPQSF 514
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 202/385 (52%), Gaps = 17/385 (4%)
Query: 81 ERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT 140
E + +LV + + + S EE R ++ KL +V +V RV+ + +
Sbjct: 37 EVTRTLVAELERQRVFESDEESKVREVILGKLDAMVKDFVYRVSIAHGMSESLARAAGGK 96
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVP 200
I T+GSY LGVHG SDID LC+ P+ EDFF V MLK R EV+E+ V A VP
Sbjct: 97 IFTFGSYRLGVHGPGSDIDTLCVVPKH-VQREDFFSVFEGMLKEREEVTEVAGVPTAHVP 155
Query: 201 LMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP 260
L+ KF G+ ID +A L + V +N+ + + LR LDE +SL G R IL+LVP
Sbjct: 156 LIASKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRSLDERDVRSLGGSRVTDGILRLVP 215
Query: 261 DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKT 320
++ F+ LRCIKLWA+RR +Y N+ GFLGGV A+L A +CQ +P + +V+ FF
Sbjct: 216 NIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLYPNEAAGAIVSRFFII 275
Query: 321 YAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITR 368
+ W WP PV+L +P L YPS+ MPI P P N+++
Sbjct: 276 FYQWKWPQPVLLTQIEDGPLSVRVWNPKL----YPSDRLHRMPIITPAYPGMCATHNVSQ 331
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + +EF R ++ DW LF + KY +++V S+ + D W
Sbjct: 332 STQMVMTSEFKRAAEVVDRVIIGKTDWSELFAKHDFYFKYKYYLQVIASSGSADLQLKWH 391
Query: 429 GWVKSRFRSLILKLEEVQGLCDPNP 453
G V+S+ R L++KLE V + +P
Sbjct: 392 GTVESKIRQLVMKLELVPTITCAHP 416
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R +++KL +V W++ ++ + LP+ I I T+G
Sbjct: 43 LIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFG 102
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK EV ++ V++A VP+++
Sbjct: 103 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLHEEVKDLRAVEEAFVPVIKLC 161
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 162 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 221
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 222 RLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWE 281
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L++P LP PS+ LMPI P P + N++ ST + E
Sbjct: 282 WPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEE 341
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 342 FKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRI 401
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 402 LVGSLEKNEFITLAHVNPQSF 422
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
R V+ KL E+V +V++VA + RLP+ E I T+GSY LGVH S+ DID LC+
Sbjct: 43 RIQVLTKLNELVKDFVRKVAKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVV 102
Query: 165 PEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-V 223
P+ T FF + +MLK V+E +++A VPL++ FDGI +D+ +A L S V
Sbjct: 103 PQHVTR-HHFFTIFLDMLKKTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKV 161
Query: 224 PENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYG 283
PE+ D+ N LR+L+E +SL+G R IL LVP++E F+ LR +KLWA+R+G+Y
Sbjct: 162 PEDQDLRNIEILRNLEEKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYK 221
Query: 284 NLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY- 342
N GF+GGV A+LVA CQ +P + +TL+ FF ++ W WP PV L+ P G+
Sbjct: 222 NALGFIGGVCWAMLVARTCQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFT 281
Query: 343 ---------PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR--P 391
P + LMPI P PH+ N++RST ++ E + TT+ +++ P
Sbjct: 282 HPVWDPRFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTP 341
Query: 392 DFD------WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ D W LF + KY F+ + +A Q+ W+G V+S R L+ LE
Sbjct: 342 NPDEPNTRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLE 399
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 101 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 160
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 161 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 219
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 220 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 279
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 280 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 339
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 340 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 399
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 400 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 459
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 460 LVGSLEKNEFITLAHVNPQSF 480
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 55 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 114
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 115 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 173
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 174 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 233
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 234 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 293
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 294 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 353
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 354 FKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 413
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 414 LVGSLEKNEFITLAHVNPQSF 434
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 205/377 (54%), Gaps = 11/377 (2%)
Query: 79 DEERSL-SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+EE+ L SL+ + + L R V++K+ +I+ + A + + Q +
Sbjct: 19 EEEKQLQSLIDTLKDLQLFEDGNRLMSRELVLKKVDKILKEFALHEAINEGIEEMQAKKL 78
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ T+GSY LG H ++DID LCL P T + FF L +L+ VS++H + +A
Sbjct: 79 RIQLKTFGSYRLGCHHPDADIDVLCLAPRHCTRVK-FFQKLPILLEVSSFVSDLHVIPNA 137
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++FK DGI +D+ ++CL++ S+PE++++L+ FL LD+ S +SL+G R + ILQ
Sbjct: 138 FVPVIKFKVDGIAVDMLFSCLYLESIPEHINILDDQFLNGLDDVSVRSLNGCRVTEKILQ 197
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
L+ E F+ L IK WA+ RG+Y N+ GFLGGV+LAI+ A VCQ +P TL+ F
Sbjct: 198 LISHQEYFRITLTAIKYWARNRGIYSNVLGFLGGVNLAIMAAKVCQLYPDALPPTLLIKF 257
Query: 318 FKTYAYWPWPTPVMLQDPMLPA---------AGYPSETRSLMPIRLPCSPHEYCHSNITR 368
F Y W WP P+ + + P YP + LMPI PC P N+
Sbjct: 258 FHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSSYNVMS 317
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST ++TEF ++ W L + KY F++V +S+ +++D G WV
Sbjct: 318 STLDVMKTEFKNASLQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEEDFGRWV 377
Query: 429 GWVKSRFRSLILKLEEV 445
WV+SR R+ ++LE +
Sbjct: 378 TWVESRLRTFFIRLEAI 394
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 202/381 (53%), Gaps = 18/381 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+Q + EG S EE KR V+++L+ + +V +V+ +R + + + I T+G
Sbjct: 29 LIQELKKEGTFESEEETAKRIKVLEELQALAQEFVFKVSRKRNMSEGMARDAGGKIFTFG 88
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID L + P+ T +DFF V +L++RPE+ EI V +A VP+++ K
Sbjct: 89 SYRLGVHGPGSDIDTLVVVPKHVTR-DDFFTVFDELLRARPELDEIAPVPEAFVPIIKIK 147
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
+ GI IDL A L + VP N+ + + LR+LDE ++L+G R IL+LVP F
Sbjct: 148 YSGISIDLICARLDIPQVPLNLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPTAF 207
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P +VA FF W
Sbjct: 208 KIALRAIKLWAQRRAVYANVFGFPGGVAWAMLVARICQLYPNACSAVIVARFFHILTRWS 267
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P + Y ++ MP+ P P NI ST
Sbjct: 268 WPQPVLLKPIEDGPLQVRVWNPKI----YANDRLHKMPVITPAYPSMCSTHNICESTKKV 323
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWVK 432
I E RG T D+ W LF+ + KY ++ V S D+ W G V+
Sbjct: 324 ILNELQRGVEVTTDIFTNKKTWGDLFQKHDFFYKYKFYLTVMASTKGSDEQHLKWSGLVE 383
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R L+LKLE + G+ +P
Sbjct: 384 SKLRLLVLKLEVLSGINLAHP 404
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 202/383 (52%), Gaps = 20/383 (5%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
L+Q + EG S +E + R V++ L+++ +V +V + + + + T+
Sbjct: 28 ELIQELKKEGSFESEQETNNRVKVLEILQKLTQDFVYKVYKNKNMSDGMAKDAGGKVFTF 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P++ T EDFF V L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKYVTR-EDFFTVFDQSLRERKELDEIAPVPDAYVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L + VP N+ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICAKLDIAQVPINLQLNDKNLLRNLDEKDLRALNGTRVTDEILELVPKPII 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VYGN+ GF GGV A+LVA +CQ +P ++ FFK + W
Sbjct: 207 FRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 KWPQPVVLKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I EF RG T D+ W+ LF+ F Y K+ + +++D L W G
Sbjct: 323 VILKEFERGMKITNDIFSNKLTWNDLFKKHTFFYDYKFYLTITTATKGTDEDHLK-WSGL 381
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R LILKLE + G+ +P
Sbjct: 382 VESKVRLLILKLEALPGITLTHP 404
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 202/381 (53%), Gaps = 18/381 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+Q + EG S +E R V++ L+E+ +V RV+ ++ + + I T+G
Sbjct: 29 LIQELKKEGSFESEQETANRIKVLKILQELAQEFVYRVSKKKNMSDGMARDAGGKIFTFG 88
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID L + P+ M EDFF VL +L+SRPE+ EI V DA VP+++ K
Sbjct: 89 SYRLGVHGPGSDIDTLVVVPKHV-MREDFFTVLDEILRSRPELEEIAPVPDAFVPIIKIK 147
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F GI IDL A L + +P+++ + + LR+LDE ++L+G R IL+LVP F
Sbjct: 148 FSGISIDLICAKLDLAQIPQSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPIVF 207
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWA RR +Y N+ GF GGV A+LVA +CQ +P + ++ FFK + W
Sbjct: 208 RIALRAIKLWANRRAIYANVFGFPGGVAWAMLVARICQLYPNATSAVILNRFFKILSEWK 267
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 268 WPQPVVLKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKRV 323
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWVK 432
I E G + T D+ W LF + KY ++ V S D+ W G V+
Sbjct: 324 ILQELENGISITNDIFSNKKTWSDLFTKHNFFYKYKFYLTVMASTRGTDEENLKWSGMVE 383
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R L+LKLE + G+ +P
Sbjct: 384 SKVRLLVLKLEALPGIKLAHP 404
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R +++KL +V W++ ++ + LP+ I I T+G
Sbjct: 43 LIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFG 102
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK EV ++ V++A VP+++
Sbjct: 103 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLHEEVKDLRAVEEAFVPVIKLC 161
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 162 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 221
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 222 RLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWE 281
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L++P LP PS+ LMPI P P + N++ ST + E
Sbjct: 282 WPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEE 341
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 342 FKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRI 401
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 402 LVGSLEKNEFITLAHVNPQSF 422
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 73 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISEIKNLPQSVIENVGGKIFTFG 132
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 133 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLC 191
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 192 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 251
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 252 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 311
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 312 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 371
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 372 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 431
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 432 LVGSLEKNEFITLAHVNPQSF 452
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 212/397 (53%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + + + +L+ + N+ L S E +KR V+ +L++I +VK+V+ +
Sbjct: 11 PISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVKKVSLAKH 70
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ ++ E I TYGSY LGV+G SDID L + P+ + ++FF L ML+ R EV
Sbjct: 71 MNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSR-DNFFQDLEPMLREREEV 129
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+++ V DA VP+++FKF GI IDL +A L V VP ++++ + L+ ++E SL+G
Sbjct: 130 TDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVLSLNG 189
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R ILQLVP+ F+ LR IK WA+RR +Y N+ GF GGV A++VA +CQ +P
Sbjct: 190 TRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNA 249
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+ +VA FF+ W WP P++L+ +P L YPS+ MPI P
Sbjct: 250 VSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKL----YPSDKAHRMPIITPA 305
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P NIT ST I E +R +M W LF+ + +Y ++ +
Sbjct: 306 YPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITA 365
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+A + W G V+S+ R L+ +LE V + +P
Sbjct: 366 AAKTAEAQLKWAGLVESKLRHLVTRLELVDAIALAHP 402
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 220/398 (55%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYAKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ FLGGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA+
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQKYKHYIVLLASATT 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 208/381 (54%), Gaps = 17/381 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+LV + + L S ++ +KR V+Q+L+ I +V++V+ + + ++ +E+ I TY
Sbjct: 27 ALVNELKAQNLFESAQDSEKRVRVLQELQAITTEFVRKVSLSKHMSEKMASESGGKIFTY 86
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ + E+FF L ML++RPE++++ V +A VP+++F
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVSR-ENFFQDLEPMLRARPEITDLAAVPEAYVPIIKF 145
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL +A L + VP ++++ + L+ ++E SL+G R ILQLVP+
Sbjct: 146 KFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEERCILSLNGTRVTDQILQLVPNRAV 205
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IK WA+RR +Y N+ GF GGV A++VA +CQ +P +V+ FF+ + W
Sbjct: 206 FKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNAVSAVIVSKFFRILSQW 265
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P L YPS+ MPI P P NIT ST
Sbjct: 266 NWPQPVLLKPIDDGPLQVRVWNPKL----YPSDKAHRMPIITPAYPSMCATHNITPSTQT 321
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 432
I E R D+M W LFE + +Y ++ V ++ D W G V+
Sbjct: 322 VILREMARAGLIVDDIMAGKKPWSALFEKHDFFHRYRYYLTVTAASKTADSQLKWSGLVE 381
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R + +LE V + +P
Sbjct: 382 SKLRHFVTRLELVDAITLAHP 402
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 211/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F GI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FGGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 280
Query: 326 WPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 215/383 (56%), Gaps = 9/383 (2%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
++E + +L+ + +G+ S EE R V+ +L ++ +V++V+ R L +
Sbjct: 23 EKEVTTTLMGELQRQGIFESEEEAKTREIVLGRLAALIKKFVRQVSLSRGLSEAAANAAG 82
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVHG +DID LC+ P T +DFF VL ML+ V+E+ V +A
Sbjct: 83 GKIYTFGSYRLGVHGPGADIDTLCVAPRHVTR-DDFFNVLEGMLREMEGVTEVSGVPEAY 141
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP++ + GI IDL +A L + +PE++D+ + LR+LDE S +SL+G R IL+L
Sbjct: 142 VPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLLRNLDEKSIRSLNGSRVINEILRL 201
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+++ F+ LRCIKLWA++R VY N++GFLGGV A+LVA VCQ +P +V+ FF
Sbjct: 202 VPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAMLVARVCQLYPNAVAGAIVSRFF 261
Query: 319 KTYAYWPWPTPVMLQ----DPMLPAAGYP---SETRS-LMPIRLPCSPHEYCHSNITRST 370
W WP PV+L+ P+ P S+ RS MPI P P N+ +ST
Sbjct: 262 VIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPIITPAYPSMCATHNVMQST 321
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
++ EF RG D+M +W LF + ++Y +++V ++ + + W G
Sbjct: 322 QQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRYRFYLQVVAASRDLEMQNKWSGT 381
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V S+ R L+++LE V L +P
Sbjct: 382 VASKIRQLVMRLEYVDALKLAHP 404
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 221/414 (53%), Gaps = 14/414 (3%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D + + SL ++ E ++ + E+ +R V+ L + W++ V+ +R LP+
Sbjct: 16 IDIQLTKSLDDALSREKVITTDEDLSQRLEVLSMLNNLAKEWIREVSMERNLPEITAENV 75
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ T+GSY LGV+ +DIDA+ + P T D+F +N LK P ++ + V++A
Sbjct: 76 GGLVCTFGSYRLGVYHKGADIDAIVIVPRHITRT-DYFATFYNKLKENPSINNVRAVEEA 134
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ GI ID+ +A L + V E+ D+ LR+L+ +SL+G R IL+
Sbjct: 135 FVPVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPKCVRSLNGCRVTDSILR 194
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP+ E F+ L IKLWAKR VY N G+LGGV A+LVA VCQ +P + TL+ F
Sbjct: 195 LVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARVCQLYPNAAPATLIHKF 254
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRS 369
F ++ W WP PV+L+ GYP ++ +MPI P P + N++ S
Sbjct: 255 FLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPVYPQQNSTFNVSHS 314
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
T I+ EF + +++ + W +F+P + KY F+ + + A+ ++L +W G
Sbjct: 315 TLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFFTKYRYFLAITVFANCDEELLEWRG 374
Query: 430 WVKSRFRSLILKLEEVQGL--CDPNPTEYI---DVDVTEPHIVFYWGLQPGRTN 478
V+SR R L LEE++ + NP +++ D P V++ GL+ ++N
Sbjct: 375 LVESRLRFLPTSLEEIECVQRSHLNPDQFVLPYDKSQGRPSSVWFVGLEISKSN 428
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 216/388 (55%), Gaps = 11/388 (2%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
P PL+ + D + + L + + GL S E +R V++ L ++ +V+ V
Sbjct: 11 PGITEPLSLEKPKEHDIKLTDELQKTLVQYGLYDSKERAKQREYVLKSLDKMTKKFVQIV 70
Query: 124 AWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
++ K++ + +LTYGSY LG + +++DID LC+ P++ + +DFF ++ ++L+
Sbjct: 71 YERQGFSKQEAIQAGGKVLTYGSYRLGANAADADIDTLCVFPKYVS-RKDFFTIMLSLLR 129
Query: 184 SRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSW 243
S ++ +I V D+ VP+++FK++ I ID A L V VPE++D+ +P L LDE S
Sbjct: 130 SNEQIKDITPVTDSYVPVIKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSI 189
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G R IL+LVP++E F+ LRCIKLWA R+ +Y N+ GFLGGV AILVA VCQ
Sbjct: 190 RSLNGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQ 249
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQ----DPMLPAAG------YPSETRSLMPIR 353
+P S +T+V +FF+ +W WP+PVML+ P L A P++ MPI
Sbjct: 250 LYPHASASTVVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPII 309
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
P P N+ ST I E + + + W LF+ + + Y ++++
Sbjct: 310 TPSYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHNFFEIYMQYLQ 369
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILK 441
+ + A N + W G V++R R L+L+
Sbjct: 370 ITVVADNYNLQLKWAGLVEARLRQLLLE 397
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 214/412 (51%), Gaps = 28/412 (6%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + N G + KR V+ +++V +V V+ + + + + T+
Sbjct: 27 SLIQELKNRGSFENESATKKRAEVLALFQKMVQEFVYTVSKSKNMSDGMAKDAGGKVFTF 86
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ T EDFF V +++ RPE+ EI V DA VP+++
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVTR-EDFFTVFEQIIRKRPELQEIASVPDAFVPIIKI 145
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+FDGI IDL A L+V VP ++ + + L+++DE +SL+G R ILQLVP
Sbjct: 146 EFDGISIDLILARLNVPRVPLDMTLDDKNLLKNIDERDLRSLNGTRVTDEILQLVPKPTV 205
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LRCIKLWA++R VYGN+ GF GGV A+LVA +CQ +P +V FF Y W
Sbjct: 206 FKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFNIYTKW 265
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P L YP + MP+ P P NIT ST
Sbjct: 266 NWPQPVLLKPIEDGPLQVRVWNPRL----YPHDRLHRMPVITPAYPSMCATHNITSSTQK 321
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWV 431
I +E RG + W L E + KY ++ + + ++ D+ W G V
Sbjct: 322 VIMSELARGAEVMNQINLGKSSWSALLERHDFFHKYKFYLCIVAATTSSDEEHLKWSGLV 381
Query: 432 KSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIV 483
+S+ R L+LKLE G+ +P Y+ D ++ +I+ G N +D++
Sbjct: 382 ESKLRHLVLKLEVTDGIELAHP--YVK-DFSDSYIL-------GENNHMDVI 423
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 208/406 (51%), Gaps = 21/406 (5%)
Query: 64 PSFNFPLNPSVLDQMDEERSL----SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAW 119
P+ N + P + R + +LV + +G+ S EE R ++ KL +V +
Sbjct: 16 PTRNLGVTPPIATNGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDF 75
Query: 120 VKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLH 179
V RV+ + + I T+GSY LGVHG SDID LC+ P+ EDFF V
Sbjct: 76 VYRVSIASGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKH-VQREDFFSVFE 134
Query: 180 NMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLD 239
MLK R EV+E+ V A VPL+ KF G+ ID +A L + V +++ + + LR+LD
Sbjct: 135 GMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLLRNLD 194
Query: 240 ETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA 299
E +SL G R IL+LVP++ F+ LRCIKLWA+RR +Y N+ GFLGGV A+L A
Sbjct: 195 ERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTA 254
Query: 300 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETR 347
+CQ +P + +V+ FF W WP PV+L +P L YPS+
Sbjct: 255 RICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKL----YPSDRL 310
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
MPI P P N+++ST + +EF R ++ W LF + K
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDFFFK 370
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
Y +++V S+ + D W G V+S+ R L++KLE V + +P
Sbjct: 371 YKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHP 416
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 237/464 (51%), Gaps = 28/464 (6%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D + SL+Q + + G + EE KR V+Q L V W++ ++ RLP + E
Sbjct: 31 DLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGIS-SARLPNGKFFEAG 89
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
++++GSY LGVH S DID++ + P + DFF L ++L P V ++ V+ A
Sbjct: 90 GQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILIRNPNVKNLNAVEKAF 148
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M F+F G+ +DL +A L + +P+ +D+ + L+++D+ S +SL+GVR + +LQL
Sbjct: 149 VPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQL 208
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+ E F LR IK+WAK GVY N GF GG+ A+LVA CQ +P S + LV F
Sbjct: 209 VPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLYPNASPSRLVQKVF 268
Query: 319 KTYAYWPWPTPVMLQDPMLPAA----------GYPSETR-SLMPIRLPCSPHEYCHSNIT 367
++ W +P+P++L P A G R LMPI P P + N++
Sbjct: 269 YVFSTWNYPSPIVLCMPTRERADMLTLDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVS 328
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
RST I+ E D+ DW FLFE + +Y FV + L A ++ +
Sbjct: 329 RSTMEVIKKEMADALVICNDIFDGKCDWKFLFEEVNFYSQYKHFVVMKLDAKKEETENSY 388
Query: 428 VGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEK 487
G+++SRFR LI E +G+ + ++ +++ GL+ D V
Sbjct: 389 GGFLESRFRQLIGAFERNRGIKMAHLNPKKCQPTSKAQSLWFIGLE------FDDVVKNM 442
Query: 488 DFLKNIHNGFQGSPGRMGLLVVQASQLS--KSSQLDFGSGRRTK 529
D + I N F+ + L VQA Q++ + +LD +R++
Sbjct: 443 DLTREIDN-FKWN------LNVQAKQIAGFEEVELDISYAKRSQ 479
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 212/397 (53%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + +EE +++L+Q + ++ S EE R V+ ++ +V +V +V+ R
Sbjct: 16 PISTAGPSKREEEVTVTLMQELRDQNRFESEEEARTREIVLGRVSALVRKFVYKVSIARG 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + I TYGSY LGVHG SDID LC+ P+ EDFF V ML+ V
Sbjct: 76 MSETAAQAAGGKIFTYGSYRLGVHGPGSDIDTLCVVPKHVNR-EDFFDVFEPMLRELEGV 134
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP+++ K I +DL +A + + SV +++D+ + LR+LDE +SL G
Sbjct: 135 AEVSGVPEAYVPIIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILRNLDERCVRSLGG 194
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 195 SRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 254
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+ +V+ FF W WP PV+L+ +P L YPS+ MPI P
Sbjct: 255 NAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKL----YPSDRAHRMPIITPN 310
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+++ST I+ E R ++ W LF + KY +++V
Sbjct: 311 YPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFFHKYRYYLQVIA 370
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S N D W G V+SR R L++KLE V L +P
Sbjct: 371 STENADLQLKWAGTVESRLRQLVMKLEYVDSLVLAHP 407
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 206/392 (52%), Gaps = 20/392 (5%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D S + + G +E R V+ KL +V +V R+A +
Sbjct: 15 PLSMKESTEEDIRLSEEMDTYLQERGFFEDCKEGQTRERVLGKLNFMVKEFVARMAKNKG 74
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ A I T+GSY LGVHG +DIDALC+ P T + DFF + LK P +
Sbjct: 75 NGDGEKA-YGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRS-DFFTYFYEELKEDPNI 132
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ ++DA VP+++F+F GI IDL +A L+V V + +++LN L+ +DE SL+G
Sbjct: 133 EGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNG 192
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R +L LVP+++ F LRCIK WAKRR VYGN +G+ GGV ++ VA VCQ +P
Sbjct: 193 SRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNA 252
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
S T+V FF+ ++ W WPTPV+L+ DP + YPS+ MP+ P
Sbjct: 253 SSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKV----YPSDKYHRMPVITPA 308
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N++ ST + I EF R H + + DF +FE + +Y FV V
Sbjct: 309 YPSMCATHNVSNSTQHVITMEFSRAHEILSNPEKNDF--RRIFELSDFFSRYKLFVEVLA 366
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
+++++ W G+V+S+ R L K E V +
Sbjct: 367 MSTSEEGFAKWEGYVESKIRILASKFEAVDDI 398
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 206/382 (53%), Gaps = 18/382 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + EE KR V++ +++ +V +V+ ++ + + + T+
Sbjct: 28 SLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVYQVSKKKNMSDGMARDAGGKVFTF 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ + EDFF V +L+ RPE+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLIVVPKHVSR-EDFFTVFDALLRERPELEEIASVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF+GI IDL +A L + VP ++ + + LR++DE ++L+G R IL+LVP+
Sbjct: 147 KFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKDLRALNGTRVTDEILELVPNKTS 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IK+WAKRR VY N+ GF GGV A+ V +CQ +P +++ FF+ + W
Sbjct: 207 FKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRICQLYPNACSAVIISKFFQILSRW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NI+ ST
Sbjct: 267 KWPQPVLLKPIEDGPLQVRVWNPKI----YAQDRSHKMPVITPAYPSMCATHNISESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWV 431
I +E RG T+ + + W LF+ + KY ++ V +S D+ W G+V
Sbjct: 323 VILSELQRGVEVTQKIFSNELSWEDLFKKHDFFFKYKFYLTVMVSTKGSDEQHLKWSGFV 382
Query: 432 KSRFRSLILKLEEVQGLCDPNP 453
+S+ R L+ KLE + G+ +P
Sbjct: 383 ESKLRLLVQKLEVLPGINLAHP 404
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 207/385 (53%), Gaps = 9/385 (2%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D E + +L + + S EE R V+ ++ +V +V R + + L +
Sbjct: 21 EKDLEVTNALEAELRANNVFESPEEAKLREVVLGRVDALVKEFVYRASIKHGLSESAARA 80
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ I T+GSY LGVHG SDID LC+ P+ EDFF + +L++R +V+E+ V +
Sbjct: 81 SGGKIFTFGSYRLGVHGPGSDIDTLCVAPKH-VQREDFFEIFEALLQARDDVTEVTSVPE 139
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VPL++ KF GI ID ++ + + + +++++ + L++LDE +SL G R IL
Sbjct: 140 AYVPLIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKNLDERDVRSLGGSRVTDEIL 199
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP++ F+ LRCIKLWA RR +Y N+ GFLGGV A+LVA +CQ +P +V+
Sbjct: 200 HLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAMLVARICQLYPNEVAGAIVSR 259
Query: 317 FFKTYAYWPWPTPVML---QDPMLPAAG-----YPSETRSLMPIRLPCSPHEYCHSNITR 368
FF W WP PV+L +D LP YP++ MPI P P N+T+
Sbjct: 260 FFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPIITPAYPSMCATHNVTQ 319
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
ST + EF RG + R W+ LFE + KY +++V S+ + D W
Sbjct: 320 STQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDFFHKYKYYLQVIASSGSADLQLKWQ 379
Query: 429 GWVKSRFRSLILKLEEVQGLCDPNP 453
G V+SR R LI+KLE V L +P
Sbjct: 380 GTVESRLRQLIMKLELVPALLCAHP 404
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 209/397 (52%), Gaps = 22/397 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S D +E SL SL+Q + G S KR V+ + +V +V V+ + +
Sbjct: 12 STADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVSISKNMS 71
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ I T+GSY LGV+G SDIDAL + P T EDFF +++ RPE+ E
Sbjct: 72 DGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTTFDKIIRQRPELQE 130
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I+ V DA VP+++ +FDGI +DL A L+V VP ++ + + L++LDE +SL+G R
Sbjct: 131 INGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNGTR 190
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
ILQLVP F+ LRCIKLWA+ R VYGN+ GF GGV A+L A +CQ +P
Sbjct: 191 VTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNAVS 250
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V FF Y W WP PV+L+ +P L Y + + MP+ P P
Sbjct: 251 AVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRL----YAHDRQHRMPVITPAYP 306
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
NIT ST I E RG + + ++ + W LF + +Y RF ++A
Sbjct: 307 SMCATHNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDFFHRY-RFYLCVVAA 365
Query: 419 SNQ--DDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+++ ++ W G+V+S+ R L++KLE +G+ +P
Sbjct: 366 TSESAEEHHKWHGFVESKLRQLVIKLESTEGVELAHP 402
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 217/425 (51%), Gaps = 24/425 (5%)
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATIL 142
S +L + + E + EE +R V+ +L ++ W + + + + ++ +
Sbjct: 33 SAALDEKLHTEDVYEDPEECTRREEVLGELNALLQEWTRTASAAKGITEDM--RPSCNLY 90
Query: 143 TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHN--------MLKSRPEVSEIHCV 194
T+GSY LGVHG +DID LCLGP + EDFF N +++ P EI V
Sbjct: 91 TFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGFEENDYEGSFYDVMRKHPGTEEIVPV 150
Query: 195 KDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
+DA VP ++ F G ID+ Y L SVPE++DV L +LD+ KSL+G R
Sbjct: 151 RDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNLDDPGVKSLNGCRVAD 210
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
+L+ VP+ + F+ LR ++LWA+RRG+Y N+ GF GGV+LAILVA VCQ +P + + L
Sbjct: 211 QLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILVARVCQLYPNAASSML 270
Query: 314 VANFFKTYAYWPWPTPVML---QDPMLPAAGY------PSETRSLMPIRLPCSPHEYCHS 364
V +FF+ ++ W W TPVML D LP +E LM I P P +
Sbjct: 271 VYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNSTF 330
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDL 424
N++ ST ++ EF RG T++++ W L+ + Y ++ V +SA +D
Sbjct: 331 NVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTSFLTMYKHYLMVSISAKTAEDF 390
Query: 425 GDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEYIDVDVTE-PHIVFYWGLQPGRTNLL 480
W GWV SR + LI +E G L P Y D + E H++ + GL P
Sbjct: 391 KKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTHVILFLGLFPSSLKKK 450
Query: 481 DIVAV 485
+ VA+
Sbjct: 451 EKVAM 455
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 212/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R +++KL +V W++ ++ + LP+ I I T+G
Sbjct: 42 LIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIRELSESKSLPQAVIENVGGKIFTFG 101
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF ++ LK EV ++ V++A VP+++
Sbjct: 102 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLHEEVKDLRAVEEAFVPVIKLC 160
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 161 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 220
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR +KLWAK +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 221 RLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWE 280
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L++P LP PS+ LMPI P P + N++ ST + E
Sbjct: 281 WPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEE 340
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 341 FKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIALLASAPTEKQHLEWVGLVESKIRI 400
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 401 LVGSLEKNEFITLAHVNPQSF 421
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 216/398 (54%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D + L++ + G+ EE R ++ KL +V W++ ++ +
Sbjct: 22 PISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNLVKEWIREISELKN 81
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 82 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEKLKQQEEV 140
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LF+ + +KY ++ + SA
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPT 380
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 418
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 222/456 (48%), Gaps = 63/456 (13%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E + R ++ KL +V WV+ V+ R +P+ + I T+GSY LGVH +DIDA
Sbjct: 87 ELNHRMEILAKLNTLVKQWVRDVSISRHMPEATAEKLGGKIYTFGSYRLGVHHKGADIDA 146
Query: 161 LCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHV 220
LC+ P + D+F +LK +PEV+E V++A VP+++ FDGI IDL +A L +
Sbjct: 147 LCVAPRNIDRS-DYFGSFFELLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLAL 205
Query: 221 LSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRR- 279
+P+N D+ + L++LD+ S +SL+G R IL+LVP+++ F+ LR IKLWAKR+
Sbjct: 206 KEIPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKL 265
Query: 280 -------------------------------GVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
G+Y N G+ GGV A+LVA CQ +P
Sbjct: 266 LPHGLISPEGMCDERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNA 325
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHE 360
TLV FF ++ W WP PV+L+ P G+ + LMPI P P +
Sbjct: 326 VAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQ 385
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF RG T D+M W LFE + +Y F+ + +++SN
Sbjct: 386 NSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSN 445
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQ--GLCDPNPTEY----------------IDVDVT 462
DD +W G V+S+ R LI LE Q L NP Y D + T
Sbjct: 446 ADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNPAATLNAGGGADANQT 505
Query: 463 EPHIVFYW--GLQPGRTNLLDIVAVE--KDFLKNIH 494
W GL+ RT L++ E + F ++H
Sbjct: 506 PAAFCSLWFIGLEFERTENLNVDLTESIQSFTDSVH 541
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 210/381 (55%), Gaps = 11/381 (2%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 39 LIETLKPFGVFEEEEELQHRILILGKLNNLVKEWIREISELKNLPQSVIENVGGKIFTFG 98
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 99 SYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEKLKQQEEVKDLRSVEEAFVPVIKLC 157
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 158 FDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 217
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 218 RLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWE 277
Query: 326 WPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
WP PV+L+ P LP PS+ LMPI P P + N++ ST + E
Sbjct: 278 WPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMVEE 337
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F +G T +++ +W LF+ + +KY ++ + SA + +WVG V+S+ R
Sbjct: 338 FKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGLVESKIRI 397
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 398 LVGSLEKNEFITLAHVNPQSF 418
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 208/397 (52%), Gaps = 22/397 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S D +E SL SL+ + G S KR V+ + +V +V V+ + +
Sbjct: 12 STADPTAKEFSLNESLIHELKGRGSFESESATKKRAEVLSLFQTLVQEFVYEVSKSKNMS 71
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ I T+GSY LGV+G SDIDAL + P T EDFF +++ RPE+ E
Sbjct: 72 DGMSRDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTTFDQIIRKRPELQE 130
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I+ V DA VP+++ +FDGI +DL A L+V VP ++ + + L++LDE +SL+G R
Sbjct: 131 INGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNGTR 190
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
ILQLVP F+ LRCIKLWA+ R VYGN+ GF GGV A+L A +CQ +P
Sbjct: 191 VTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNAVS 250
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+ +V FF Y W WP PV+L+ +P L Y + MP+ P P
Sbjct: 251 SVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRL----YAHDRLHRMPVITPAYP 306
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
NIT ST I E LRG + + + + W LFE + +Y RF ++A
Sbjct: 307 SMCATHNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNFFHRY-RFYLCVVAA 365
Query: 419 S--NQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ + ++ W G+V+S+ R L+LKLE +G+ +P
Sbjct: 366 TVDSAEEHHKWHGFVESKLRQLVLKLESTEGIEIAHP 402
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 223/420 (53%), Gaps = 24/420 (5%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+ + G S + KR ++ +++V +V +V+ + + + + I T+G
Sbjct: 28 LIAELKARGSFESEQATRKRVEILNLFQKLVQEFVHKVSKSKNMSEGMAKDAGGKIFTFG 87
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGV+G SDID L + P+ T EDFF V ++++ RPE+ EI V DA VP+++ +
Sbjct: 88 SYRLGVYGPGSDIDTLVVVPKHVTR-EDFFSVFESIVRERPELEEITSVPDAFVPIIKIE 146
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI IDL A L+V VP N+ + + LR+LDE ++L+G R ILQLVP F
Sbjct: 147 FDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDERDMRALNGTRVTDEILQLVPKPTVF 206
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LRCIK+WA+ R VYGN+ GF GGV A++VA +CQ +P +V FF Y W
Sbjct: 207 KHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVARICQLYPNAVGAVIVDKFFNIYTKWN 266
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P L Y ++ MPI P P NIT ST
Sbjct: 267 WPQPVLLKPIEDGPLQVKVWNPRL----YTNDRNHRMPIITPAYPSMCATHNITSSTQKV 322
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL-SASNQDDLGDWVGWVK 432
I +E ++G + D+ W LF+ + +Y ++ + + + +N+++ W G+V+
Sbjct: 323 ILSELVKGVDIVGDIKLGKRTWSDLFQRHDFFFRYKFYLCIVVGTKANEEEHSKWSGFVE 382
Query: 433 SRFRSLILKLEEVQGLCDPNP-----TEYIDVDVTEP-HIVFYWGLQPGRTNLLDIVAVE 486
S+ R L+ KLE G+ +P + D++ EP +V +G+ G + L + VE
Sbjct: 383 SKLRLLVQKLEATSGIEIAHPYVKDFNDSYDINDLEPFEVVNSYGILSGASVLNKLQKVE 442
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 233/476 (48%), Gaps = 29/476 (6%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+ + G S + KR ++ L+++V +V V+ ++ + + I T+
Sbjct: 27 SLIAELKARGSFESEQATRKRVEILALLQKMVQEFVYTVSKKKNMSDGMAKDAGGKIFTF 86
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ + EDFF + M++ RPE+ EI V DA VP++
Sbjct: 87 GSYRLGVYGPGSDIDTLIVVPKHV-VREDFFTIFDQMIRQRPELEEITAVPDAFVPIIMI 145
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+F GI IDL +A L+V VP ++ + + L+++DE ++L+G R ILQLVP +
Sbjct: 146 EFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDENDMRALNGTRVTDQILQLVPKVTV 205
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LRCIKLWA++R VYGN+ GF GGV A+LVA +CQ +P +V FF Y W
Sbjct: 206 FKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFNIYTKW 265
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P L YP + + MP+ P P NI ST
Sbjct: 266 NWPQPVLLKPIEDGPLQVRVWNPRL----YPHDRQHKMPVITPAYPSMCATHNINSSTQK 321
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS--NQDDLGDWVGW 430
I E RG + + W LF+ + +Y +F ++A+ ++ W G
Sbjct: 322 VIMNELERGSELMAQISLNNKTWADLFQRHDFFHRY-KFYLCIIAATEGTNEEHSKWSGM 380
Query: 431 VKSRFRSLILKLEEVQGLCDPNP------TEYIDVDVTEPHIVFYWGLQPGRTNLLDIVA 484
V+S+ R LI KLE G+ +P Y+ ++ + I+ +G G T L +
Sbjct: 381 VESKLRILIQKLELTDGIALAHPYVKDFSDSYLIQEIPKDDILAAYGTLKGETLLNKLKH 440
Query: 485 VEKDFLKNIHNGFQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLP 540
VEK +++ Q + L ++L +D G K LD P
Sbjct: 441 VEK---TDVNKDTQKDDQKEDLKQYHLTKLFVGLDIDIGKSSGHTGGTKKLDIQYP 493
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 208/397 (52%), Gaps = 22/397 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S D +E SL SL+Q + G S KR V+ + +V +V V+ + +
Sbjct: 12 STADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVSISKNMS 71
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ I T+GSY LGV+G SDIDAL + P T EDFF +++ R E+ E
Sbjct: 72 DGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTTFDKIIRQRSELQE 130
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I+ V DA VP+++ +FDGI +DL A L+V VP ++ + + L++LDE +SL+G R
Sbjct: 131 INGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNGTR 190
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
ILQLVP F+ LRCIKLWA+ R VYGN+ GF GGV A+L A +CQ +P
Sbjct: 191 VTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNAVS 250
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V FF Y W WP PV+L+ +P L Y + + MP+ P P
Sbjct: 251 AVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRL----YAHDRQHRMPVITPAYP 306
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
NIT ST I E RG N + ++ + W LF + +Y RF ++A
Sbjct: 307 SMCATHNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDFFHRY-RFYLCVVAA 365
Query: 419 SNQ--DDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+++ ++ W G+V+S+ R L++KLE +G+ +P
Sbjct: 366 TSESAEEHHKWHGFVESKLRQLVIKLESTEGVELAHP 402
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 203/381 (53%), Gaps = 18/381 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LVQ + E + +E R V++ L+++ +V +V+ + + ++ + T+G
Sbjct: 29 LVQELKKENSFETEQETANRVKVLEILQKLTENFVFKVSKNKNMSDGMAKDSGGKVFTFG 88
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID L + P+ T EDFF V ++L+ RPE+ EI V DA VP+++ K
Sbjct: 89 SYRLGVHGPGSDIDTLIVVPKHVTR-EDFFTVFDSLLRERPELEEIAPVPDAFVPVIKVK 147
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F GI IDL A L + VP N+ + + LR+LDE ++L+G R IL+LVP F
Sbjct: 148 FSGISIDLLCARLDIAQVPLNLTLSDKNLLRNLDEKELRALNGTRVTDEILELVPKPNVF 207
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWA+RR +Y N+ GF GGV A+LVA +CQ +P ++ FFK ++ W
Sbjct: 208 RITLRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVVLNRFFKIFSEWK 267
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 268 WPQPVVLKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKTI 323
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWVK 432
I EF RG T D+ +W LF+ + +Y ++ + S D+ W G V+
Sbjct: 324 ILKEFARGVQVTNDIFSNKGNWGDLFKKHTFFYEYKFYLTITASTRGTDEEHLKWSGLVE 383
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R LILKLE + G+ +P
Sbjct: 384 SKLRLLILKLEALPGINLAHP 404
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 230/441 (52%), Gaps = 19/441 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + D E + SL + + EE +R V+QKL V W++++ + R
Sbjct: 24 PISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQKIT-EAR 82
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
PK+Q+ ++ +GSY LGVH S +DID L L P AT A DFF ML PEV
Sbjct: 83 YPKDQLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSFKQMLAKDPEV 141
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ + V++A VP+M K+ GI ID +A L + VPE++D+L+ L++LD+ S +SL+G
Sbjct: 142 TNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESVRSLNG 201
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R + +L+LVP+ E F LR IKLWAK G+Y N GF GG+ AILVA CQ +P
Sbjct: 202 CRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNA 261
Query: 309 SLNTLVANFFKTYAYWPWPTPVML----QDPMLPAA---------GYPSETRSLMPIRLP 355
S + L+ F ++ W WP PV+L D M A S+ LMPI P
Sbjct: 262 SPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTP 321
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY 415
P + N++RS+ I+ E T ++ +W L E + +Y F+ +
Sbjct: 322 AFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKHFISLS 381
Query: 416 LSASNQDDLGDWVGWVKSRFRSLILKLEEVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQ 473
++A + D + G+ +SR R L+L LE+ QG L NP ++ + V++ GLQ
Sbjct: 382 MTAETEKDELAFGGFFESRIRQLVLILEKNQGIKLAHINPKKFKAAKDPKKS-VWFIGLQ 440
Query: 474 -PGRTNLLDIVAVEKDFLKNI 493
LD+ + F +NI
Sbjct: 441 FDENVKNLDLTKDIQQFKRNI 461
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 213/411 (51%), Gaps = 28/411 (6%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+Q + EG S +E + R V++ L+E+ +V RV+ ++ + + + YG
Sbjct: 29 LIQELKKEGSFESEQETENRVKVLKTLQELTQEFVYRVSKKKNMSDGMARDAGGKVFPYG 88
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID L + P+ T EDFF V +L+ R E+ EI V DA VP+++ K
Sbjct: 89 SYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDELLRGRQELEEIAAVPDAFVPIIKMK 147
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F GI IDL A L + +P+++ + + LR+LDE ++L+G R IL+LVP F
Sbjct: 148 FSGISIDLICAHLDLAQIPQSLTLADKNLLRNLDEKDLRALNGTRVTDEILELVPKPIVF 207
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWA+RR +Y N+ GF GGV A+LVA +CQ +P ++ FFK + W
Sbjct: 208 RIALRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILSEWK 267
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 268 WPQPVVLKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKKV 323
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG--DWVGWV 431
I E RG T D+ W LF+ + +Y +F ++A+N D W G V
Sbjct: 324 ILGELGRGIRITNDIFTNKKTWADLFQRHTFFHEY-KFYLTVMAATNGDSEQHLKWSGMV 382
Query: 432 KSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEP-HIVFYWGLQPGRTNLLD 481
+S+ R L+LKLE + G+ +P T+P +Y+ + R ++D
Sbjct: 383 ESKVRLLVLKLEALTGIKIAHP-------YTKPFETAYYYHNEEERKKIVD 426
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 196/367 (53%), Gaps = 12/367 (3%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E R ++ + ++V +V V+ + + ++ +E I T GSY LGVHG SD
Sbjct: 44 SDQERKVRERLLSNIAQLVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSD 103
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID +C+ P E FF +ML++ P V+EI V+ A VP+M+ G+ +DL +A
Sbjct: 104 IDTICVCPRH-IYREHFFGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFAR 162
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
+++ +++D+ LR +D+ S +SL+G R IL LVPD+ F+ LR I+LWAK
Sbjct: 163 VNLPEAGDSLDIEKDEILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAK 222
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD--- 334
RRG+Y N+ GF GGV A+L A +CQ +P + T+V FF Y W WP PV+L+
Sbjct: 223 RRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDN 282
Query: 335 ---PMLPAAGYPSETRS----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRD 387
M + P R MP+ P P NIT ST IR E LR T +
Sbjct: 283 GPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDE 342
Query: 388 LMR-PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ 446
+++ PD W LFE + Y +V+V SAS D + DW G V+SR R+L+ LE
Sbjct: 343 ILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLENTD 402
Query: 447 GLCDPNP 453
+ +P
Sbjct: 403 CIITAHP 409
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 204/387 (52%), Gaps = 22/387 (5%)
Query: 73 SVLDQMDEERSLS--LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S + +EE LS + + + G +E R V+ KL +V +V R+A + +
Sbjct: 17 STRESTEEEIRLSGEMDKYLQERGFFEDDKEGQTRERVLGKLNFMVREFVARMA-RNKGS 75
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ I T+GSY LGVH +DIDALC+ P + + DFF + LK P + E
Sbjct: 76 GDGERPCGGKIFTFGSYRLGVHSKGADIDALCIVPRHVSRS-DFFTHFYEELKGDPNIEE 134
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+ ++DA VP+++ KF GI IDL +A L + V + +++LN L+ +DE SL+G R
Sbjct: 135 VTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKSMDEKCILSLNGSR 194
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
+L LVP ++ F LRCIK WAKRR VYGN +G+ GGV ++ VA VCQ +P S
Sbjct: 195 VTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNASS 254
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
T+V FF+ ++ W WPTPV+L+ DP + YPS+ MP+ P P
Sbjct: 255 FTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKV----YPSDKYHRMPVITPAYP 310
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
N++ ST + I EF R H D R DF +FE + +Y FV V +
Sbjct: 311 SMCATHNVSNSTQHVITMEFTRAHKILSDPERNDF--RRIFELSDFFSRYRLFVEVLAMS 368
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLEEV 445
S ++D W G+++S+ R L K E V
Sbjct: 369 SCEEDFPKWEGYLESKIRILASKFEAV 395
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 197/370 (53%), Gaps = 18/370 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E R ++ + ++V +V V+ + + ++ +E I T GSY LGVHG SD
Sbjct: 44 SDQERKVRERLLSNIAQLVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSD 103
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID +C+ P E FF +ML++ P V+EI V+ A VP+M+ G+ +DL +A
Sbjct: 104 IDTICVCPRH-IYREHFFGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFAR 162
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
+++ +++D+ LR +D+ S +SL+G R IL LVPD+ F+ LR I+LWAK
Sbjct: 163 VNLPEAGDSLDIEKDEILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAK 222
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPML 337
RRG+Y N+ GF GGV A+L A +CQ +P + T++ FF Y W WP PV+L+
Sbjct: 223 RRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIIGKFFPIYYQWSWPQPVLLKK--- 279
Query: 338 PAAGYPSETRSL-------------MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
G P+ S+ MP+ P P NIT ST IR E LR
Sbjct: 280 IDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQI 339
Query: 385 TRDLMR-PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
T ++++ PD W LFE + Y +V+V SAS D + DW G V+SR R+L+ LE
Sbjct: 340 TDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE 399
Query: 444 EVQGLCDPNP 453
+ +P
Sbjct: 400 NTDCIITAHP 409
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 205/367 (55%), Gaps = 11/367 (2%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDID 159
EEE + ++ KL +V W++ ++ + LP+ I I T+G Y LGVH +DID
Sbjct: 38 EEEQLQHRILGKLNNLVKEWIREISELKHLPQSVIENVGGKIFTFGPYRLGVHTKGADID 97
Query: 160 ALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLH 219
ALC+ P + DFF ++ LK + EV ++ V++A VP+++ FDGI ID+ +A L
Sbjct: 98 ALCVAPRHVDRS-DFFSSFYDKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLA 156
Query: 220 VLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRR 279
+ ++PE++D+ + L++LD +SL+G R IL LVP+++ F+ LR IKLWAKR
Sbjct: 157 LQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRH 216
Query: 280 GVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM--- 336
+Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W WP PV+L+ P
Sbjct: 217 NIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECN 276
Query: 337 --LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRP 391
LP PS+ LMPI P P + N++ ST + EF +G T +++
Sbjct: 277 LNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLG 336
Query: 392 DFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLC 449
+W LF+ + +KY ++ + SA + +WVG V+S+ R L+ LE E L
Sbjct: 337 KAEWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLA 396
Query: 450 DPNPTEY 456
NP +
Sbjct: 397 HVNPRSF 403
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 208/370 (56%), Gaps = 14/370 (3%)
Query: 100 EEEDKRRN---VIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
EEED+ ++ ++ KL +V W++ ++ + LP+ I I T+GSY LGVH +
Sbjct: 50 EEEDELQHRILILGKLNNLVKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGA 109
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
DIDALC+ P + DFF + LK + EV ++ V++A VP+++ FDGI ID+ +A
Sbjct: 110 DIDALCVAPRHVDRS-DFFSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFA 168
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F+ LR IKLWA
Sbjct: 169 RLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWA 228
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM 336
KR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W WP PV+L+ P
Sbjct: 229 KRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPE 288
Query: 337 -----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL 388
LP PS+ LMPI P P + N++ ST + EF +G T ++
Sbjct: 289 ECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEI 348
Query: 389 MRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQ 446
+ +W LF+ + +KY ++ + SA + +WVG V+S+ R L+ LE E
Sbjct: 349 LLLKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFI 408
Query: 447 GLCDPNPTEY 456
L NP +
Sbjct: 409 TLAHVNPQSF 418
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 211/382 (55%), Gaps = 12/382 (3%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ EE +R ++ KL +V W++ ++ + LP+ I I T+G
Sbjct: 39 LIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFG 98
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK-DAKVPLMRF 204
SY LGVH +DIDALC+ P + DFF ++ LK + EV ++ K +A VP+++
Sbjct: 99 SYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRVCKWEAFVPVIKL 157
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL LVP+++
Sbjct: 158 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 217
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 218 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 277
Query: 325 PWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+L+ P LP PS+ LMPI P P + N++ ST +
Sbjct: 278 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 337
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFR 436
EF +G T +++ +W LFE + +KY ++ + SA + +WVG V+S+ R
Sbjct: 338 EFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIR 397
Query: 437 SLILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 398 ILVGSLEKNEFITLAHVNPQSF 419
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 238/466 (51%), Gaps = 32/466 (6%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D + SL+Q + + G + EE KR V+Q L V W++ ++ RLP + E
Sbjct: 29 DLSLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNVTVKKWIQGIS-AARLPNGKFFEAG 87
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
++++GSY LGVH S DID++ + P T DFF L ++L P V ++ V+ A
Sbjct: 88 GQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRT-DFFTSLKDILIRNPNVKNLNAVEKAF 146
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M F+F G+ +DL +A L + +P+ +D+ + L+++D+ S +SL+GVR + +LQL
Sbjct: 147 VPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQKSVRSLNGVRVAEKLLQL 206
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+ E F LR IK+WAK GVY N GF GG+ AILVA CQ +P S + LV F
Sbjct: 207 VPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARTCQLYPNASPSRLVQKVF 266
Query: 319 KTYAYWPWPTPVMLQDPMLPAA----------GYPSETR-SLMPIRLPCSPHEYCHSNIT 367
++ W +P+P++L P + G R LMPI P P + N++
Sbjct: 267 YVFSTWNYPSPIVLCMPTRERSDMLALDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVS 326
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
RST I+ E D+ DW FLFE + +Y FV + L A ++ +
Sbjct: 327 RSTMEVIKKEMADALVICNDIFEGKSDWKFLFEEVNFYSQYKHFVVMKLDAKKEETENSY 386
Query: 428 VGWVKSRFRSLILKLEEVQG--LCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
G+++SR R L+ E +G L NP + ++ +++ GL+ D V
Sbjct: 387 GGFLESRLRVLVGAFERNRGIKLAHLNPKKC--QPTSKAQSIWFIGLE------FDEVVK 438
Query: 486 EKDFLKNIHNGFQGSPGRMGLLVVQASQLS--KSSQLDFGSGRRTK 529
D + I N F+ + L VQA Q++ + +LD +R++
Sbjct: 439 NMDLTREIDN-FKWN------LNVQAKQIAGFEEVELDISYVKRSQ 477
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 222/399 (55%), Gaps = 11/399 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 23 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 82
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ + I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 83 LPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYAKLKLQEEV 141
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L+DLD S +SL+G
Sbjct: 142 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKDLDIRSIRSLNG 201
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 202 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVARTCQLYPNA 261
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 262 VASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 321
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 322 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 381
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEYI 457
+ +WVG V+S+ R L+ LE E L NP ++
Sbjct: 382 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFL 420
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 204/384 (53%), Gaps = 19/384 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D + SL+Q + + G + EE KR V+Q L V W++ ++ RLP + E
Sbjct: 31 DISLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNATVKKWIQGIS-ASRLPNGKFFEAG 89
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
++++GSY LGVH S DID++ + P + A DFF L ++L P V ++ V+ A
Sbjct: 90 GQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRA-DFFTSLKDILIRNPNVKNLNAVEKAF 148
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M F+F G+ +DL +A L + +PE +D+ + L+++D+ S +SL+GVR + +LQL
Sbjct: 149 VPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQL 208
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+ E F LR IK+WAK GVY N GF GG+ AILVA CQ +P S + LV F
Sbjct: 209 VPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARACQLYPNASPSRLVQKVF 268
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------------SETRSLMPIRLPCSPHEYCHS 364
++ W +P+P++L +P P ++ LMPI P P +
Sbjct: 269 YVFSTWNYPSPIVL---CMPTRERPDMLALDNLCWGRNHADRFHLMPIITPAFPEQNSTH 325
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDL 424
N++RST I+ E D+ DW LFE + +Y FV + L A ++
Sbjct: 326 NVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLFEEVNFYSQYKHFVVMKLDAKKEETE 385
Query: 425 GDWVGWVKSRFRSLILKLEEVQGL 448
+ G+++SR R L+ E +G+
Sbjct: 386 NSYGGFLESRLRVLVGAFERNRGI 409
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 218/398 (54%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ +V + D + L++ + G+ EE +R V++KL +V W++ ++ +
Sbjct: 26 PISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKS 85
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 86 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEV 144
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAK +Y N+ GF GGV A+LVA CQ +P
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTCQLYPNA 264
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+TLV +F ++ W WP PV+L++P LP PS+ LMPI P P +
Sbjct: 265 VASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + F +G T +++ W LFE + +KY ++ + SAS
Sbjct: 325 NSTYNVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 422
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 210/399 (52%), Gaps = 18/399 (4%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
P PL+ + + D E S L + M G+ + EE+ R V+ K+ +V AW++ V
Sbjct: 19 PGVTSPLSLAPPKEHDLELSKKLEKEMAPYGVFETEEEQAHRMEVLNKVNILVKAWIRDV 78
Query: 124 AWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
+ + +P+ I + T+GSY LGV+ +DID LC+ P + DFF LK
Sbjct: 79 SLSKSMPESLIEVVGGGVYTFGSYRLGVNTKGADIDTLCVAPRHV-LRSDFFGSFFESLK 137
Query: 184 SRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSW 243
PEV + V++A VP+++ +FDGI +D+ +A L + V EN ++ + L++LD
Sbjct: 138 QHPEVKDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEENQNLRDESLLKNLDIRCI 197
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G R IL LVP++E F+ LR +KLWAK++G+Y N GFLGGV A+LVA CQ
Sbjct: 198 RSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGVSWAMLVARTCQ 257
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQ-------------DPMLPAAGYPSETRSLM 350
+P TL+ FF ++ W WP PV+L+ DP + S+ LM
Sbjct: 258 LYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNV----SDRFHLM 313
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYAR 410
PI P P + N++ ST + EF ++ +W LF+P + +KY
Sbjct: 314 PIITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKDEWGSLFQPSDFFQKYKH 373
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
++ + + +D +WVG V+S+ R L+ LE+ +C
Sbjct: 374 YIVLVARSDTEDHQLEWVGLVESKIRILVGNLEKNPFIC 412
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 215/426 (50%), Gaps = 26/426 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E +KR V++ L +V WVK V ++P + A + T+GSY LGVH S +DID
Sbjct: 47 ETEKRMEVLRSLNRLVKEWVKNVT-AIKIPSGEGANAGGKLFTFGSYRLGVHSSGADIDT 105
Query: 161 LCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHV 220
L + P DFF ML P V+E+H V++A VP+M+ K+ G+ +D+ +A L +
Sbjct: 106 LAVVPRHIDRT-DFFTSFKEMLSQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLAL 164
Query: 221 LSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRG 280
VP+ ++ + L++LD+ S +SL+G R + +L+LVP + LR IKLWAK G
Sbjct: 165 KEVPDTQELSDDSLLKNLDQESVRSLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHG 224
Query: 281 VYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD------ 334
+Y N GF GG+ AIL+A CQ +P S + LV F +A W WP PV+L +
Sbjct: 225 IYSNSMGFFGGISWAILIARACQLYPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERT 284
Query: 335 ---PMLPAAGYPSETRS----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRD 387
++ P + LMPI P P + N+TRST IRTE G RD
Sbjct: 285 DVGALIDLVWDPRRKSTDRFHLMPIITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRD 344
Query: 388 LMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG 447
+ W LF+ + +Y ++ + ++A N+++ ++ G+++SR R L+ LE Q
Sbjct: 345 ISEGKCGWDALFKEVNFFSRYKHYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQD 404
Query: 448 LC----DPN-----PTEYIDVDVTEPHIVFYW-GLQ-PGRTNLLDIVAVEKDFLKNIHNG 496
+ DPN P DV I ++ GL+ T LD+ + F N+
Sbjct: 405 IVIAHNDPNKHKPSPNAKFDVSPENKRITLWFIGLEFVEHTKSLDLTSEIHRFKTNVELQ 464
Query: 497 FQGSPG 502
G G
Sbjct: 465 ASGVKG 470
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 202/378 (53%), Gaps = 19/378 (5%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + + G + EE KR V+Q L V W++ ++ RLP + E ++++
Sbjct: 842 SLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGIS-SARLPNGKFFEAGGQVVSF 900
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVH S DID++ + P + DFF L ++L P V ++ V+ A VP+M F
Sbjct: 901 GSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILLRNPNVKNLNAVEKAFVPIMTF 959
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+F G+ +DL +A L + +PE +D+ + L+++D+ S +SL+GVR + +LQLVP+ E
Sbjct: 960 EFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQLVPNRES 1019
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F LR IK+WAK GVY N GF GG+ A+LVA CQ +P + + LV F ++ W
Sbjct: 1020 FCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLYPNATPSRLVQKVFYVFSTW 1079
Query: 325 PWPTPVMLQDPMLPAAGYP--------------SETRSLMPIRLPCSPHEYCHSNITRST 370
+P+P++L +P P ++ LMPI P P + N++RST
Sbjct: 1080 NYPSPIVL---CMPTRERPDMLALDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVSRST 1136
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I+ E D+ DW FLFE + +Y FV + L A ++ + G+
Sbjct: 1137 MEVIKKEMADALIICNDVFEGKCDWKFLFEEVNFYSQYKHFVVMKLDAKKEETENSYGGF 1196
Query: 431 VKSRFRSLILKLEEVQGL 448
++SR R L+ E +G+
Sbjct: 1197 LESRLRVLVGAFERNRGI 1214
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 198/382 (51%), Gaps = 18/382 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
L+Q + E + +E R V++ L+ + +V +V+ + + + I TY
Sbjct: 28 ELIQELKKENSFETEQETANRVKVLETLQMLTEKFVFQVSKNKNMSDGMAKDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V +L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDALLRERDELDEIAPVPDAFVPIIKM 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L + VP N+ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDIAQVPLNLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR +Y N+ GF GGV A+LVA +CQ +P ++ FFK + W
Sbjct: 207 FRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 KWPQPVVLKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWV 431
I EF RG T D+ W LF+ + KY ++ + +S D+ W G V
Sbjct: 323 VILEEFARGIQVTNDIFSNKGTWADLFQKHDFFYKYKFYLTITVSTKGSDEEHLKWSGLV 382
Query: 432 KSRFRSLILKLEEVQGLCDPNP 453
+S+ R L+LKLE + G+ +P
Sbjct: 383 ESKTRLLVLKLEALAGIKLAHP 404
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 142/443 (32%), Positives = 226/443 (51%), Gaps = 26/443 (5%)
Query: 76 DQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
D D ++ L++ + G EE ++R V++ L +V WVK V + +P +
Sbjct: 24 DSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVTAMK-IPNGEGV 82
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
+ T+GSY LGVH S +DID L + P + DFF ML + P V+E+H V+
Sbjct: 83 NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNNDPNVTELHGVE 141
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP+M+ K+ G+ +D+ +A L + VP+ ++ + LR+LD+ S +SL+G R + +
Sbjct: 142 EAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNGCRVAEQL 201
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L+LVP ++F LR IKLWAK G+Y N GF GG+ AILVA CQ +P S + LV
Sbjct: 202 LKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSRLVH 261
Query: 316 NFFKTYAYWPWPTPVMLQD--------PMLPAAGYPSETRS-----LMPIRLPCSPHEYC 362
F ++ W WP PV+L + P L + ++ +MPI P P +
Sbjct: 262 RMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPEQNS 321
Query: 363 HSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQD 422
N+TRST I+ E RD+ W LFE + +Y F+ + ++A N++
Sbjct: 322 THNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALIMAAPNEE 381
Query: 423 DLGDWVGWVKSRFRSLILKLEEVQGLC----DPN-----PTEYIDVDVTEPHI-VFYWGL 472
+ ++ G+++SR R L+ LE Q + DPN P DV+ + V++ GL
Sbjct: 382 EELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAKFDVNPENKRVTVWFIGL 441
Query: 473 Q-PGRTNLLDIVAVEKDFLKNIH 494
+ LD+ + F N+
Sbjct: 442 EFAEHAKTLDLTNEIQRFKTNVE 464
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 178/304 (58%), Gaps = 13/304 (4%)
Query: 181 MLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDE 240
ML PEV+E+H V DA VPLM FK +G+ IDL YA L + +PE++D+ L++ DE
Sbjct: 1 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 60
Query: 241 TSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAH 300
+ +SL+G R IL+LVP+++ F+ LRC++ WAKRRGVY N+ GFLGG++ A+LVA
Sbjct: 61 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 120
Query: 301 VCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPI 352
+CQ +P N LV+ FF+ + W WP + L P + G P + +MPI
Sbjct: 121 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 180
Query: 353 RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV 412
P P N++ ST ++ EF RG+ + DW LFEPF + + Y ++
Sbjct: 181 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYL 240
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL--CDPNPTEYIDVDVTEP-HIVFY 469
++ +SA+N DDL W GWV+SR R L LK+E + C P+P ++ D + P H ++
Sbjct: 241 QIDISAANVDDLRKWKGWVESRLRQLTLKIERHFKMLHCHPHPHDF--QDTSRPLHCSYF 298
Query: 470 WGLQ 473
GLQ
Sbjct: 299 MGLQ 302
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 213/397 (53%), Gaps = 26/397 (6%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVI-QKLKEIVLAWVKRVAWQRRLPKEQIAET 137
D S +V+++ N+ +E + K+R+ I KL +I++ W++ V + + + +
Sbjct: 47 DTLESKQIVEILKNDFNQYESEGDRKKRDAILGKLNQIIVEWIQNVGKREGKDDDTVKNS 106
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGVH ++DIDALC+ P FF L ++LK+ P V ++ V++A
Sbjct: 107 GGKIFTFGSYRLGVHSPDTDIDALCVAPRHIERTRHFFGELSDILKNHPGVQKLTEVQEA 166
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSV-PENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
VP++ F+G+ IDL +A + + V E V++L+ LR+ D+ S +SL+G R IL
Sbjct: 167 YVPVINMVFEGVEIDLLFARVELKEVGQELVNLLDDNILRNCDKESIRSLNGCRVTDSIL 226
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
QLVP+ E F+ LR IKLWAK RG+Y N+ GFLGGV AILVA++C P N L+
Sbjct: 227 QLVPNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGVAWAILVANICITCPNLEPNKLLNY 286
Query: 317 FFKTYAYWPW--PTPVMLQD----------PMLPAAGYPSETRSLMPIRLPCSPHEYCHS 364
FFK Y W W P++L + + Y + LMPI P P
Sbjct: 287 FFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEEKQTDLMPIITPAFPSMNATF 346
Query: 365 NITRSTFYKIRTEFLRGHNTTRDL---------MRPDFDWHFLFEPFPYSKKYARFVRVY 415
N++ ST + EF +G T L + + +W LF+ F + K Y F+++
Sbjct: 347 NVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMNWRRLFKKFNFFKSYVHFIQIQ 406
Query: 416 LSASNQDDLGDWVGWVKSRFRSLILKLE---EVQGLC 449
+ + + +D W G+++S+ R L+ +LE E++G C
Sbjct: 407 ILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGC 443
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 224/432 (51%), Gaps = 20/432 (4%)
Query: 63 VPSFNFPLNPSVLDQM----DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLA 118
VP + + P + + M D + + +L+ M E L S E KR V+ L ++V
Sbjct: 15 VPKKQYGVTPPISEAMATPQDYKLTENLIIAMRQENLYESVEGMKKREYVLASLNKLVRE 74
Query: 119 WVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
W+ + + + +E+ I T+GSY LGV + SDID LC+ P + E FF
Sbjct: 75 WIYEASLEHSMNEEEALSAGGGIFTFGSYRLGVVAAGSDIDTLCIAPRHIS-RESFFSFF 133
Query: 179 HNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDL 238
L+ V+++ V DA P+++ + G+ +DL +ACL++ +P +++ L+ L+++
Sbjct: 134 LAKLQQDINVTKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNV 193
Query: 239 DETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILV 298
D+ + +SL+G R N ILQLVP+ E F+ LR +K W+K RG+Y N+ G+LGG+ AIL
Sbjct: 194 DDKTARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILT 253
Query: 299 AHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML-QDPMLPA-----AGY--------PS 344
A +CQ +P + + ++ FF Y W W PV+L + +P G+ P
Sbjct: 254 ARICQLYPNAAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQ 313
Query: 345 ETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
+ +MPI P P N+T +T I E R + +D+ WH ++ PF +
Sbjct: 314 DRAHVMPIITPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPFLF 373
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL-CDPNPTEYIDVDVTE 463
+K+ F++V + ++N+ W+GW++S+ R L+ KLE +GL P P + D +
Sbjct: 374 FEKHKHFIQVKMLSNNEQAFHKWIGWIESKLRFLVRKLETFKGLQVRPWPKAIQEQDEAK 433
Query: 464 PHIVFYWGLQPG 475
+F + G
Sbjct: 434 DGFIFAQSMYIG 445
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 216/398 (54%), Gaps = 11/398 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + LV+ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAXLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ L PI P P +
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 324 NSTYNVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 421
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 197/382 (51%), Gaps = 18/382 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+L+Q + E S E+ KR V++ L+ + +V +V+ +R + + I TY
Sbjct: 28 ALIQELKKEKSFESEEDTKKRVEVLRILQNLAQEFVYQVSKKRNMSDGMAKDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V +L++R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDQILRTRSELEEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L + VP N+ + + LR+LDE ++L+G R ILQLVP
Sbjct: 147 KFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDEKDLRALNGTRVTDEILQLVPKPTS 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF W
Sbjct: 207 FKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILTRFFHILTKW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NI+ ST
Sbjct: 267 NWPQPVLLKPIEDGPLQVRVWNPRI----YAQDRSHKMPVITPAYPSMCATHNISESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWV 431
I E RG + ++ W LF+ + KY ++ V S S + W G V
Sbjct: 323 VILAELERGAQISSEIFSNKKTWSDLFQKHDFFYKYKFYLTVMASTSGSSEQHLKWSGLV 382
Query: 432 KSRFRSLILKLEEVQGLCDPNP 453
+S+ R L+ KLE + G+ +P
Sbjct: 383 ESKLRLLVQKLETLGGINLAHP 404
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 199/383 (51%), Gaps = 20/383 (5%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SLVQ + EG + E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLVQELKKEGSFETEHETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V +L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDALLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP+++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPQSLTLADKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I EF RG T D+ W LFE F Y K+ + Y S++ L W G
Sbjct: 323 VILKEFERGVQITNDIFSNKKSWANLFEKNDFFYRYKFYLEITAYTRGSDEQHL-KWGGL 381
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R LI+KLE + G+ +P
Sbjct: 382 VESKVRLLIMKLEVLAGIKIAHP 404
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 196/378 (51%), Gaps = 10/378 (2%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
L+Q + +G S E KR V+Q L+ + +V +V+ + + + + I TY
Sbjct: 28 QLIQELKKQGNFESESETKKRIEVLQLLQNLATNFVYKVSKNKNMSEGMAKDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ T +DFF V +L++R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVYGPGSDIDTLVVVPKHVT-RDDFFTVFDELLRTRSELEEIAPVPDAFVPIIKV 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
K GI IDL YA L + VP N+ + + LR+LDE +SL+G R ILQLVP
Sbjct: 147 KISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDEKDLRSLNGTRVTDEILQLVPKPVV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR +Y N+ GF GGV A+LVA +CQ +P + +V+ FF W
Sbjct: 207 FKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQLYPNAVSSVIVSKFFHILTQW 266
Query: 325 PWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+ LQ + YP + + MP+ P P NIT ST I
Sbjct: 267 NWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPAYPSMCATHNITASTQKVILN 326
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWVKSRF 435
E RG D++ W LF + KY ++ + D+ W G V+S+
Sbjct: 327 ELQRGSLIMNDIISHKKQWEDLFVKHDFFYKYKFYLNIIAFTRGDDEQHLKWSGLVESKL 386
Query: 436 RSLILKLEEVQGLCDPNP 453
R L+ KLE QG+ +P
Sbjct: 387 RLLVQKLENFQGINLAHP 404
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 203/384 (52%), Gaps = 19/384 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D + SL+Q + + G EE KR V+Q L V W++ ++ RLP + E
Sbjct: 30 DLSLTCSLLQELKSFGSFEEKEETTKRIQVLQFLNATVKKWIQSIS-ATRLPNGKFFEAG 88
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
++++GSY LGVH S DID++ + P T + DFF L ++L P V ++ V+ A
Sbjct: 89 GQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRS-DFFTSLKDILLRNPNVKNLNAVEKAF 147
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+M F+F G+ +DL +A L + +PE +D+ + L+++D+ S +SL+GVR + +LQL
Sbjct: 148 VPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQL 207
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+ E F LR IK+WAK GVY N GF GG+ A+LVA CQ +P S + LV F
Sbjct: 208 VPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLYPNASPSRLVQKVF 267
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------------SETRSLMPIRLPCSPHEYCHS 364
++ W +P+P++L +P P ++ LMPI P P +
Sbjct: 268 YVFSTWNYPSPIVL---CMPTRERPDMLTLDNLCWGRNHADRFHLMPIITPAFPEQNSTH 324
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDL 424
N++RST I+ E D+ DW LFE + +Y FV + L A ++
Sbjct: 325 NVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLFEELNFYSQYKHFVVLKLDAKKEETE 384
Query: 425 GDWVGWVKSRFRSLILKLEEVQGL 448
+ G+++SR R L+ E +G+
Sbjct: 385 NSYGGFLESRLRVLVGAFERNRGI 408
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 203/373 (54%), Gaps = 9/373 (2%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+ M L + E +R +V+ +L +V +V+R R + +I E I T+
Sbjct: 28 SLMAEMRARNLFETDAGERRRESVLGRLDGMVKEFVRRACQLRGRSQSEIDEAGGKIFTF 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG +DID LC+ P + A DFF + +ML+ R +V +I + +A VPL++
Sbjct: 88 GSYRLGVHGPGADIDTLCVVPVYVERA-DFFTIFLDMLRERDDVRDITDIPEAYVPLIKV 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF + IDL +A ++ +VP+++++ + L+ LDE +SL+G R IL+LVP++
Sbjct: 147 KFTNVEIDLTFARINRPTVPDDLELGDDNLLKQLDERDVRSLNGSRVTDQILRLVPNIPV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IK WAKRR VY N+ GF GGV A+LVA +CQ +P +++ FF + W
Sbjct: 207 FRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLVARICQLYPNECPGGILSRFFHIFLLW 266
Query: 325 PWPTPVML----QDPMLPAAGYP----SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+L Q P+ P ++ MP+ P P NI+ S+ I+
Sbjct: 267 QWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPVITPAYPSMCSTHNISHSSMAVIKA 326
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFR 436
E+ RG N + W LFEP + KY ++++ S+ + D+ W G V+S+ R
Sbjct: 327 EWERGENIVNRIAVGQTTWAELFEPTDFFYKYRYYLQITASSQDMDNQLKWSGTVESKLR 386
Query: 437 SLILKLEEVQGLC 449
+L LE +G+
Sbjct: 387 TLGANLEGAEGVT 399
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 201/383 (52%), Gaps = 20/383 (5%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I EF+RG T D+ W LFE F + K+ + Y S++ L W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGL 381
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R L++KLE + G+ +P
Sbjct: 382 VESKVRLLVMKLEVLAGIKIAHP 404
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 197/371 (53%), Gaps = 19/371 (5%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E R ++ + ++V +V V+ + + ++ +E I T GSY LGVHG SD
Sbjct: 44 SDQERKVRERLLSNIAQLVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSD 103
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID +C+ P E FF +ML++ P V+EI V+ A VP+M+ G+ +DL +A
Sbjct: 104 IDTICVCPRH-IYREHFFGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFAR 162
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSL-SGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
+++ +++D+ LR +D+ S +SL +G R IL LVPD+ F+ LR I+LWA
Sbjct: 163 VNLPEAGDSLDIEKDEILRGVDDASQRSLNAGPRVTDMILNLVPDVATFRTALRTIRLWA 222
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM 336
KRRG+Y N+ GF GGV A+L A +CQ +P + T+V FF Y W WP PV+L+
Sbjct: 223 KRRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKK-- 280
Query: 337 LPAAGYPSETRSL-------------MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHN 383
G P+ S+ MP+ P P NIT ST IR E LR
Sbjct: 281 -IDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQ 339
Query: 384 TTRDLMR-PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKL 442
T ++++ PD W LFE + Y +V+V SAS D + DW G V+SR R+L+ L
Sbjct: 340 ITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDL 399
Query: 443 EEVQGLCDPNP 453
E + +P
Sbjct: 400 ENTDCIITAHP 410
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 201/383 (52%), Gaps = 20/383 (5%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I EF+RG T D+ W LFE F + K+ + Y S++ L W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGL 381
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R L++KLE + G+ +P
Sbjct: 382 VESKVRLLVMKLEVLAGIKIAHP 404
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 212/397 (53%), Gaps = 17/397 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++E + +L++ + + + + EE +R V+ ++ +V +V++V+ R
Sbjct: 13 PISTGESTNREKEVTATLMEELRRQNTIETEEESRRREVVLGRVAALVKKFVRQVSMARG 72
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG SDID LC+ P+ + EDFF V MLK
Sbjct: 73 LSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFEVFEPMLKEADGA 131
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
SE+ V +A VP+++ K GI DL A L + S+P+++ + + LR+LDE +SL G
Sbjct: 132 SEVSGVPEAYVPIIKAKLMGIPFDLLMARLALSSIPDDLSLKDDNLLRNLDERCIRSLGG 191
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 192 SRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 251
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPC 356
+V+ FF W WP PV+L+ +P L YP++ MPI P
Sbjct: 252 IAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKL----YPADRSHRMPIITPA 307
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T ST + EF +G + ++ +W LF + KY +++V
Sbjct: 308 YPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTAEWSELFAKHDFFHKYRYYLQVIA 367
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S + D W G V+SR R L++KLE V L +P
Sbjct: 368 STGSADLQIKWSGTVESRIRQLVMKLEYVDSLILAHP 404
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 193/370 (52%), Gaps = 18/370 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E R ++ + ++V +V V+ + L ++ +E I T GSY LGVHG SD
Sbjct: 40 SEQERKVRERLLSNIAQLVTKFVHDVSIKSGLSEKVASEAGGRIYTSGSYRLGVHGPGSD 99
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID +C+ P E FF ML++ P V+EI V+ A VP+M+ G+ +DL +A
Sbjct: 100 IDTICVCPRH-VFKEHFFGEFKEMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFAR 158
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
+++ + +D+ LR +D+ S + L+G R IL LVPD+ F+ LR I+LWAK
Sbjct: 159 VNLAEAGDKLDLEKDEILRGVDDASQRGLNGPRVTDMILNLVPDVATFRTALRTIRLWAK 218
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPML 337
RRG+Y N+ GF GGV A+L A +CQ +P + T+VA FF + W WP PV+L+
Sbjct: 219 RRGIYSNVLGFPGGVAWALLTARICQLYPTAAPATIVAKFFPIFYQWGWPNPVLLKK--- 275
Query: 338 PAAGYPSETRSL-------------MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+G P+ S+ MPI P P NIT ST I+ E LR
Sbjct: 276 IESGPPNMHHSVWNPKLDRRDMAHRMPIITPAYPSMCTTHNITASTMSVIKNEMLRAMQV 335
Query: 385 TRDLM-RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
T +M P W LFE + Y +V+V SAS + + DW G V+SR R+L+ LE
Sbjct: 336 TDRIMSNPGSSWMELFEQIDFFSMYKSYVQVIASASTSEGIKDWGGTVESRIRTLVQDLE 395
Query: 444 EVQGLCDPNP 453
+ +P
Sbjct: 396 NSDNIITAHP 405
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 201/383 (52%), Gaps = 20/383 (5%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I EF+RG T D+ W LFE F + K+ + Y S++ L W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGL 381
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R L++KLE + G+ +P
Sbjct: 382 VESKVRLLVMKLEVLTGIKIAHP 404
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 199/379 (52%), Gaps = 12/379 (3%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+ LQ + Y + MP+ P P NIT ST I
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQ 326
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
EF+RG T D+ W LFE F + K+ + Y S++ L W G V+S+
Sbjct: 327 EFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGLVESK 385
Query: 435 FRSLILKLEEVQGLCDPNP 453
R L++KLE + G+ +P
Sbjct: 386 VRLLVMKLEVLAGIKIAHP 404
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 205/396 (51%), Gaps = 20/396 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S + +E+SL SL++ + G + KR V+ L++I +V RV+ + +
Sbjct: 13 STAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVYRVSLNKNMS 72
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ + I TYGSY LGV+G SDID L + P+ DFF V ++L+ RPE+ E
Sbjct: 73 EGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESLLRERPELEE 131
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I V DA VP+++ +F GI IDL A L + VP ++ + + LR+LDE +SL+G R
Sbjct: 132 IASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDLRSLNGTR 191
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
IL LVP F+ LRCIK+WA++R +Y N+ GF GGV A+L A +CQ +P
Sbjct: 192 VTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQLYPNAVS 251
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V FF Y+ W WP PV+L+ +P L YP + MP+ P P
Sbjct: 252 AVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRL----YPHDRSHRMPVITPAYP 307
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
NIT ST I +EF RG D+ +W LF + +Y ++ V S
Sbjct: 308 SMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVAST 367
Query: 419 -SNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ ++ W G V+S+ R L+ KLE +G+ +P
Sbjct: 368 KGSAEEHLKWSGMVESKLRILVQKLELTEGITIAHP 403
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 208/397 (52%), Gaps = 25/397 (6%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDID 159
EE DKR V++ L +V WVK V ++P A + T+GSY LGVH S +DID
Sbjct: 73 EETDKRLEVLRALNRLVKEWVKNVT-AIKIPSGDGANAGGKLFTFGSYRLGVHSSGADID 131
Query: 160 ALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLH 219
L + P + DFF ML P V+E+H V++A VP+M+ K+ G+ +D+ +A L
Sbjct: 132 TLAVVPRHIDRS-DFFTSFKEMLNQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLA 190
Query: 220 VLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRR 279
+ VP+N ++ + LR+LD S +SL+G R + +L+LVP ++F LR IK+WAK
Sbjct: 191 LREVPDNQELSDDQLLRNLDPESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNH 250
Query: 280 GVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPA 339
G+Y N GF GG+ AIL+A CQ +P S + LV F ++ W WP PV+L++
Sbjct: 251 GIYSNSMGFFGGISWAILIARACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDR 310
Query: 340 AGYP-------------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTR 386
P ++ LMPI P P + N+TRST I+ E R
Sbjct: 311 NDIPTLCELIWDPRHKNTDRFHLMPIITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICR 370
Query: 387 DLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE-- 444
D+ W LFE + +Y F+ + ++A N+++ + G+++SR R L+ LE
Sbjct: 371 DIHDGRAKWSALFEEVNFFSRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP 430
Query: 445 --VQGLCDPN---PTEYIDVDVTEPH---IVFYWGLQ 473
+ DPN P++ DV+ + V++ GL+
Sbjct: 431 DIILAHNDPNKHKPSKNAKFDVSPENKRITVWFIGLE 467
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 199/379 (52%), Gaps = 12/379 (3%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+ LQ + Y + MP+ P P NIT ST I
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQ 326
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
EF+RG T D+ W LFE F + K+ + Y S++ L W G V+S+
Sbjct: 327 EFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGLVESK 385
Query: 435 FRSLILKLEEVQGLCDPNP 453
R L++KLE + G+ +P
Sbjct: 386 VRLLVMKLEVLAGIKIAHP 404
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 254/531 (47%), Gaps = 50/531 (9%)
Query: 2 AAYACNNNQSNNLVVYPYNFVDFYPQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVF 61
AAY N N S++ Y +FV P V P L V + P +
Sbjct: 164 AAYFFNENSSSS---YDADFVGSLPLTYVTPVAYPSVLMVTTEEETEQYGITAPISMA-- 218
Query: 62 LVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVK 121
+P+ LD E L +++ GL S E R V++K+ + W++
Sbjct: 219 ---------DPTELDLRQSE---ELERVLHEYGLFESDAELTHRMEVLRKVNLLFRQWIR 266
Query: 122 RVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
++ QR +P + I T+GSY LGVH +DID LC+ P + EDFF ++
Sbjct: 267 DLSIQRNMPPDVADSVGGKIFTFGSYRLGVHTRGADIDTLCVAPRH-ILREDFFTSFKDL 325
Query: 182 LKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDET 241
LKS+PEVSE +++A VP+++ KFDGI +D+ +A L + VPEN + + LR+LD
Sbjct: 326 LKSQPEVSECRPIEEAFVPVIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDVK 385
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKR-RGVYGNLHGFLGGVHLAILVAH 300
+SL+G R IL LVP+ E F+ LR IK WAKR +GVY N+ GFLGGV A+LVA
Sbjct: 386 CIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVAR 445
Query: 301 VCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAA-GY-------------PSET 346
CQ +P+ + N LV WP PV+L++ + GY S+
Sbjct: 446 TCQLYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDR 497
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSK 406
LMPI P P + N++ +T ++ G + +++ W LFEP +
Sbjct: 498 YHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVICKGLSWPKLFEPSNFFV 557
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG--LCDPNPTEYIDVDVTEP 464
KY ++ + A+ + DL W G V+S+ R LI + E G L NP ++ ++
Sbjct: 558 KYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNTGVLLAHVNPEQFSPLEEHGD 617
Query: 465 HIVFYW--GLQPGRTNL----LDIVAVEKDFLKNI-HNGFQGSPGRMGLLV 508
+ +W GL+ + + +D+ + + F+ +I R G+ V
Sbjct: 618 GVESFWVVGLEMNKEGIGAKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKV 668
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 209/396 (52%), Gaps = 19/396 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S+ D + + L+ M +E L + E KR ++ L ++V W+ + +
Sbjct: 29 PISESLPTPQDYKLTEQLIIAMRSENLYETVEGMKKREQILASLNKMVREWIYEASLEHS 88
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ +E+ I T+GSY LGV + SDID LC+ P T + FF L+ +
Sbjct: 89 MSEEESLTAGGGIYTFGSYRLGVVAAGSDIDTLCIVPRHIT-RDSFFTFFLAKLQQDIHI 147
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++I V DA P+++ + GI +DL +ACL++ +P +++ L+ LR++DE + +SL+G
Sbjct: 148 TKIQPVPDAYTPIIKMVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEKTARSLNG 207
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R N ILQLVP+ E F+ LR +K W+K RG+Y N+ G+LGG+ AIL A +CQ +P
Sbjct: 208 CRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARICQLYPNS 267
Query: 309 SLNTLVANFFKTYAYWPWPTPVML--------QDPMLPAAGY--------PSETRSLMPI 352
+ N ++ FF Y W W PV+L P L G+ P + LMPI
Sbjct: 268 APNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGL--MGFRVWNPNTNPQDRAHLMPI 325
Query: 353 RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV 412
P P N+T++T I E RG +++ W L+ P+ + + + F+
Sbjct: 326 ITPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPYMFFENHKHFI 385
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
+V + A+++ W GW++S+ R L+ KLE +GL
Sbjct: 386 QVKMLANSEQAFQKWTGWIESKIRFLVRKLETFKGL 421
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 199/379 (52%), Gaps = 12/379 (3%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+ LQ + Y + MP+ P P NIT ST I
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQ 326
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
EF+RG T D+ W LFE F + K+ + Y S++ L W G V+S+
Sbjct: 327 EFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGLVESK 385
Query: 435 FRSLILKLEEVQGLCDPNP 453
R L++KLE + G+ +P
Sbjct: 386 VRLLVMKLEVLAGIKIAHP 404
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 205/396 (51%), Gaps = 20/396 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S + +E+SL SL++ + G + KR V+ L++I +V RV+ + +
Sbjct: 13 STAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVYRVSLNKNMS 72
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ + I TYGSY LGV+G SDID L + P+ DFF V ++L+ RPE+ E
Sbjct: 73 EGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESLLRERPELEE 131
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I V DA VP+++ +F GI IDL A L + VP ++ + + LR+LDE +SL+G R
Sbjct: 132 IASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDLRSLNGTR 191
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
IL LVP F+ LRCIK+WA++R +Y N+ GF GGV A+L A +CQ +P
Sbjct: 192 VTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQLYPNAVS 251
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V FF Y+ W WP PV+L+ +P L YP + MP+ P P
Sbjct: 252 AVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRL----YPHDRLHRMPVITPAYP 307
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
NIT ST I +EF RG D+ +W LF + +Y ++ V S
Sbjct: 308 SMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVAST 367
Query: 419 -SNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ ++ W G V+S+ R L+ KLE +G+ +P
Sbjct: 368 KGSAEEHLKWSGMVESKLRILVQKLELTEGITIAHP 403
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 195/370 (52%), Gaps = 18/370 (4%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E R ++ + ++V +V V+ + + ++ +E I T GSY LGVHG SD
Sbjct: 44 SDQERKVRERLLSNIAQLVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSD 103
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID +C+ P E FF +ML++ P V+EI V+ A VP+M+ G+ +DL +A
Sbjct: 104 IDTICVCPRH-IYREHFFGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFAR 162
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
+++ + +D+ LR +D+ S +SL+G R IL LVPD+ F+ LR I+LWAK
Sbjct: 163 VNLPEAGDLLDIEKDEILRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAK 222
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPML 337
RRG+Y N+ GF GGV A+L A +CQ +P + T+V FF Y W WP PV+L+
Sbjct: 223 RRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIVGKFFPIYYQWNWPQPVLLKK--- 279
Query: 338 PAAGYPSETRSL-------------MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
G P+ S+ MP+ P P NIT ST IR E LR
Sbjct: 280 IDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQI 339
Query: 385 TRDLMR-PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
T ++++ P W LFE + Y +V+V SAS D + DW G V+SR R+L+ LE
Sbjct: 340 TDEILKTPGSSWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE 399
Query: 444 EVQGLCDPNP 453
+ +P
Sbjct: 400 NTDCIITAHP 409
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 198/365 (54%), Gaps = 18/365 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D R+ L + + + S EE + R ++ KL +V W++ + R +P +
Sbjct: 40 DLSRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNMPPNVADQVG 99
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVH +DIDALC+ P + D+F ++LKS+ EV+++ V++A
Sbjct: 100 GKIYTFGSYRLGVHHKGADIDALCVVPRHINRS-DYFSSFFDLLKSQMEVTDLRAVEEAY 158
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI ID+ +A L + VP+++D+ + L++LD+ +SL+G R IL+L
Sbjct: 159 VPVIKMNFDGIEIDMLFAKLALKEVPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRL 218
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR IKLWAK+ G+Y N+ G+LGGV A+LVA CQ +P TL+ FF
Sbjct: 219 VPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFF 278
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
++ W WP PV+L+ P G+ + +T S ++ F
Sbjct: 279 LVFSQWKWPQPVLLKSPENVNLGF-----------------QVWDPRVTMSDRTIMQEAF 321
Query: 379 LRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
G T +++ W LFEP + KY ++ + S+S +D +W G V+S+ R L
Sbjct: 322 ETGLAITEEIIMGKASWDKLFEPPNFFGKYRHYIVLLASSSTAEDQLEWCGLVESKIRHL 381
Query: 439 ILKLE 443
I LE
Sbjct: 382 IGTLE 386
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 216/399 (54%), Gaps = 19/399 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ ++E +++L++ + + + EE R V+ ++ +V +V++V+ +
Sbjct: 31 PISTMESNEREKEVTMTLMEELRRQNTFETEEEARTREIVLGRVAALVKKFVRQVSIAKG 90
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L ++ I T+GSY LGVHG SDID LC+ P+ + EDFF V MLK V
Sbjct: 91 LSEQAANLAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFEVFEPMLKDLEGV 149
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSL-- 246
+E+ V +A VP+++ K GI +D A L + S+P+++ + + LR+LDE +SL
Sbjct: 150 TEVSGVPEAYVPIVKTKISGIPLDFLMARLALSSIPDDLSLQDDNLLRNLDERCVRSLGA 209
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP 306
+G R IL+LVP+++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 210 TGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQLYP 269
Query: 307 KGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRL 354
+V+ FF W WP PV+L+ +P L YP++ MPI
Sbjct: 270 NAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKL----YPADRSHRMPIIT 325
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRV 414
P P N+T ST + EF RG + ++ W LF + KY +++V
Sbjct: 326 PAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSATWSELFAKHDFFHKYRYYLQV 385
Query: 415 YLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S N D W G V+SR R L++KLE V L +P
Sbjct: 386 IASTGNADLQIKWSGTVESRIRQLVMKLEYVDSLILAHP 424
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 214/396 (54%), Gaps = 20/396 (5%)
Query: 73 SVLDQMDEERSLS--LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S+ D +E+ L+ L++ + G S KR V+ L+++ +V V+ QR +
Sbjct: 13 SLSDPTSKEKELNDLLIKELKLRGSYESESATLKRVEVLTTLQKLTEQFVYEVSLQRNMS 72
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ + I T+GSY LGV+G SDIDAL + P T +DFF V +L+ R E+ E
Sbjct: 73 QGMAKDAGGKIFTFGSYKLGVYGPSSDIDALVVVPRHVT-RDDFFTVFEKILRGRQELEE 131
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I+CVK+A VP+++ +F GI IDL +A L + VP ++ + + L+++DE ++L+G R
Sbjct: 132 INCVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTR 191
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
IL+LVP F+ LR +K+WA++R +Y N++GF GGV A+LVA +CQ +P
Sbjct: 192 VTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVARICQLYPNAVS 251
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
++ FF+ Y+ W WP PV+L+ +P L Y + + MP+ P P
Sbjct: 252 AVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRL----YAMDRQHRMPVITPAYP 307
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLS 417
NIT ST I +EF RG ++ W L E + KY ++ V +
Sbjct: 308 SMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDFFHKYKFYLCVVAAT 367
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
SN ++ + G V+S+ R L+ KLE+V+G+ +P
Sbjct: 368 KSNTEEHSKYSGMVESKLRLLVQKLEQVEGVELAHP 403
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 203/390 (52%), Gaps = 22/390 (5%)
Query: 73 SVLDQMDEERSLS--LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
S+ + ++E LS + + G +E R V+ KL +V +V R+ R
Sbjct: 17 SMKESTEKEMKLSEEMDMYLQERGFFEDDKEGQTRERVLGKLNFMVREFVARMGKGRGSG 76
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ A I T+GSY LGVHG +DIDALC+ P T DFF + LK P + E
Sbjct: 77 DGEKA-YGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVT-RNDFFTHFYEELKGDPNIKE 134
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+ ++DA VP+++F+F GI IDL +A L+V V + +++LN L+ +DE SL+G R
Sbjct: 135 VTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNGSR 194
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
+L LVP++ F LRCIK WAKRR VYGN +G+ GGV ++ VA VCQ +P S
Sbjct: 195 VTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNASS 254
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
++V FF+ ++ W WPTPV+L+ DP + YPS+ MP+ P P
Sbjct: 255 FSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKV----YPSDKYHRMPVITPAYP 310
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA 418
N++ ST + I EF R H + DF +F+ + +Y F + +
Sbjct: 311 SMCATHNVSNSTQHVISMEFARAHEILSSPEKNDF--RKIFDLSDFFSRYKLFAEILAMS 368
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
+ ++ W G+V+S+ R L K E V +
Sbjct: 369 TEEEGFPKWEGYVESKVRILASKFEAVDDI 398
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 214/400 (53%), Gaps = 30/400 (7%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAW-QR 127
P++ + D E + L++ + + L + + + KR V++ L ++ +V++ A Q
Sbjct: 18 PVSTDGPSESDREDTAELMKFLVAQNLFETEDGKRKRERVLESLNRVLQQFVRKNAIKQL 77
Query: 128 RLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE 187
+P ++ ++ A +LT+GSY LG+ SDID LCL P+ T E FF +N LK P
Sbjct: 78 GIPDDEASKISAKLLTFGSYRLGIVAPNSDIDCLCLCPQSVT-RESFFTDFYNALKLLPN 136
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
++++H V DA P+++ +DGI IDL +A L +VPE +DVL+ LR+++E + +S++
Sbjct: 137 ITKLHAVPDAYTPVIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAILRNMNEATARSIN 196
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL VP+ + F+ LR +KLWA RRG+Y + ++GGV AIL A VCQ +P
Sbjct: 197 GCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAWAILTARVCQLYPN 256
Query: 308 GSLNTLVANFFKTYAYWPWPTPVML----QDPMLPAAGY-----------PSETRSLMPI 352
N L+ FF+ YA W W PVML + P +P GY P++ + LMP+
Sbjct: 257 FLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIP--GYMSFKVWDPRNNPTDRQHLMPV 314
Query: 353 RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFD-------WHFLFEPFPYS 405
P P NIT +T + EF R + DL++ + W + E
Sbjct: 315 ITPAFPSMNSTHNITLTTKRILTDEFKRAN----DLLKVNAKGAQMKNIWERVLEKEDMF 370
Query: 406 KKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
+ F+ + + A+ + G W GW+ SR R LI K+E V
Sbjct: 371 ASHKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIETV 410
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 201/371 (54%), Gaps = 33/371 (8%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
R V+ KL E+V +V++VA + RLP+ E I T+GSY LGVH S+ DID LC+
Sbjct: 43 RIQVLTKLNELVKDFVRKVAKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVV 102
Query: 165 PEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-V 223
P+ T FF + +MLK V+E +++A VPL++ FDGI +D+ +A L S V
Sbjct: 103 PQHVTR-HHFFTIFLDMLKKTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKV 161
Query: 224 PENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYG 283
PE+ D+ N LR+L+E +SL+G R IL LVP++E F+ LR +KLWA+R+G+Y
Sbjct: 162 PEDQDLRNIEILRNLEEKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYK 221
Query: 284 NLHGFLGGVHLAILVAHVCQN-------------HPKGSLNTLVANFFKTYAYWPWPTPV 330
N GF+GGV A+LVA CQ +P + +TL+ FF ++ W WP PV
Sbjct: 222 NALGFIGGVCWAMLVARTCQVGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPV 281
Query: 331 MLQDPMLPAAGY----------PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
L+ P G+ P + LMPI P PH+ N++RST ++ E
Sbjct: 282 FLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKD 341
Query: 381 GHNTTRDLMR--PDFD------WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 432
+ TT+ +++ P+ D W LF + KY F+ + +A Q+ W+G V+
Sbjct: 342 AYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVE 401
Query: 433 SRFRSLILKLE 443
S R L+ LE
Sbjct: 402 SNIRKLVNDLE 412
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 209/383 (54%), Gaps = 19/383 (4%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
MD + S L + E + + EE +R V+ ++ E + W + + + + E+ +
Sbjct: 1 MDLKLSADLEARLHLENVFEAPEECTRREEVLGEINEALQQWCRARSASKGI--EEDLDP 58
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV--------LHNMLKSRPEVS 189
+ T+GSY LGVHG +DID LC+GP T AEDFF + +K+ P
Sbjct: 59 RCNLYTFGSYRLGVHGPAADIDTLCIGPRHLTRAEDFFGSEWTGYEGSFYLEMKNHPGTD 118
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V DA VP ++ F G ID+ Y C+ +SVPE++DV L++LD+ S KSL+G
Sbjct: 119 QVVAVPDAVVPELKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLNG 178
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R +L+LVP+ + F+ LR +++WAK RGVY N+ G+ GGV+LA+LVA VCQ +P
Sbjct: 179 CRVADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPNA 238
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY--------PSETRSLMPIRLPCSPHE 360
+ + LV +FF+ + W W TPVML + G +E LM I P P +
Sbjct: 239 APSMLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQ 298
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N+T ST + ++ EF RG +++ W L+EP P+ + +++V ++A +
Sbjct: 299 NSTFNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPFFTMHKHYLQVTIAAVS 358
Query: 421 QDDLGDWVGWVKSRFRSLILKLE 443
+DD W GWV SR R L+ +E
Sbjct: 359 EDDFKKWEGWVHSRLRMLVQGVE 381
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 226/431 (52%), Gaps = 29/431 (6%)
Query: 80 EERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+E SL +L+ + + G S + KR V+ + +++V +V V+ ++ + +
Sbjct: 20 KENSLNDALIGELRSRGSFESEQATKKRVEVLTQFQKMVQEFVFTVSKKKNMSDGMAKDA 79
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ T+GSY LGV+G SD+D L + P+ + EDFF V +++ RPE+ EI V DA
Sbjct: 80 GGKVFTFGSYRLGVYGPGSDLDTLVVVPQHVSR-EDFFTVFAEIIRKRPELEEIVPVPDA 138
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ ++DG+ +DL +ACL+V +P ++ + + LR+LDE +SL+G R ILQ
Sbjct: 139 FVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDERDLRSLNGTRVTDEILQ 198
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LRCIK+WA+++ VYGN+ GF GGV A+LVA +CQ +P +V F
Sbjct: 199 LVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIVEKF 258
Query: 318 FKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSN 365
F Y W WP PV+L+ +P L Y ++ MP+ P P N
Sbjct: 259 FNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRL----YANDRLHRMPVITPAYPSMCATHN 314
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS--ASNQDD 423
IT ST I +E +G R + W LF+ + Y ++ V + AS+++
Sbjct: 315 ITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDFFHHYKFYLCVVAATVASDEEH 374
Query: 424 LGDWVGWVKSRFRSLILKLEEVQGLCDPNP------TEYIDVDVTEPHIVFYWGLQPGRT 477
L W G ++S+ R L+LKLE +G+ +P Y+ D ++ +G G+
Sbjct: 375 L-KWTGLIESKLRHLVLKLEVTEGVELAHPYVKDFSDSYVLGDANPSDVIGAYGTLSGQP 433
Query: 478 NLLDIVAVEKD 488
LD +A D
Sbjct: 434 -FLDTLAKSDD 443
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 213/395 (53%), Gaps = 16/395 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++++ L+Q + ++ + S +E R V+ ++ +V +VKRV+ +
Sbjct: 5 PISLASPTDLEKQVDAGLIQELKDQNTIESEQESLNREKVLALVQSLVKEFVKRVSIRNG 64
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ + + I T+GSY LGV+ +DID LC+ P+ + EDFF V +LK+R EV
Sbjct: 65 MSESLADQAGGKIFTFGSYRLGVNQPGADIDTLCVVPKHVSR-EDFFDVFEPLLKTREEV 123
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS- 247
S V DA VP+++ GI ID A L + ++P+++++ + L++LDE +SL+
Sbjct: 124 SVCAGVPDAYVPIIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDERCVRSLND 183
Query: 248 ------GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
G R IL++VP+++ F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +
Sbjct: 184 NLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARI 243
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----PMLPAAG----YPSETRSLMPIR 353
CQ +P + ++A FF W WP PV+L++ P+ YPS+ MPI
Sbjct: 244 CQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHRMPII 303
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
P P N+ ST +R EF RG + + + W LF + KY +++
Sbjct: 304 TPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQLFNKHEFFSKYKHYLQ 363
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
+ S + W G V+S+ R L+ KLE V G+
Sbjct: 364 IIASGQTAESQKKWSGAVESKVRQLVSKLELVDGI 398
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 220/425 (51%), Gaps = 28/425 (6%)
Query: 75 LDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQI 134
L +D +R+ L L+ E + S E +R V+ +L E++ W++ + + P E I
Sbjct: 22 LGALDIKRTKELDSLLKLEDVYESQSECTRREEVLGELNEMLQDWIRTRSLSKGHPDESI 81
Query: 135 AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV--------LHNMLKSRP 186
+ T+GSY LGVHG +DID+L +GP+ AEDFF ++ ++
Sbjct: 82 ---RCNLYTFGSYRLGVHGPAADIDSLVIGPKHIDRAEDFFGFEEDDFEGSFYDYMRKHE 138
Query: 187 EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLDETSWKS 245
+I V DA VP ++ +F G ID+ Y L S VP ++DVL+ L LD+ KS
Sbjct: 139 GTEKIVAVPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDDAGVKS 198
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH 305
L+G R +L+LV + +++ LR ++LWA RRGVY N+ GF GGV+LAILVA VCQ +
Sbjct: 199 LAGCRVADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVARVCQLY 258
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQD-PMLPAAGYPS-----------ETRSLMPIR 353
P S + LV +FF+ + W W TPVML + P P E LM I
Sbjct: 259 PNASASMLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKII 318
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
P P + N++ ST ++ EF RG T ++ + W ++ + KY +++
Sbjct: 319 TPAYPAQNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSDVQFFAKYKTYLQ 378
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLE---EVQGLCDPNPTEYIDVDV-TEPHIVFY 469
+ ++A N++D W GWV SR ++L+ +E E + P ++ D + E H +
Sbjct: 379 LIVTADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVF 438
Query: 470 WGLQP 474
+GL P
Sbjct: 439 FGLFP 443
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 205/397 (51%), Gaps = 29/397 (7%)
Query: 72 PSVLDQMDEERSLSLVQL---MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+ L + +E + Q+ + S + R V+ +L +V +V++ A
Sbjct: 13 PASLKESTQESTQLANQMDKYLRESNFFESEDAGQTRERVLGRLDFLVKKFVEKTA---- 68
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
P+ + I T+GSY LGVH +DID LC+ P + +DFF + + L V
Sbjct: 69 -PEGEQKNYGGKIFTFGSYRLGVHDRGADIDVLCVVPRHVSR-KDFFTIFYEELGQDENV 126
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
EI ++DA VP++ +DGI IDL +A L++ + EN+ +LN LR +DE SL+G
Sbjct: 127 KEISKIEDAYVPIISLTYDGIPIDLTFARLNLPVIAENISLLNDTILRSMDEKCILSLNG 186
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+L+P ++ F LR IK WAKRR +YGN +G+ GGV +I VA +CQ +P
Sbjct: 187 SRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGVTFSICVARICQMYPNL 246
Query: 309 SLNTLVANFFKTYAYWPWPTPVML------------QDPMLPAAGYPSETRSLMPIRLPC 356
+V FF+TY+ W WPTPV L DP + YP++ MP+ P
Sbjct: 247 CAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKV----YPADKYHKMPVITPV 302
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P N+T+STF I +E RG+ +LMR + LFE + KK+ F+ V +
Sbjct: 303 YPSINSTHNVTQSTFILICSELARGN----ELMRSKAPFSKLFEVSGFFKKHKMFIEVRI 358
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
++ + W G+++S+ R L KLE ++ + P
Sbjct: 359 NSEDLQAFNIWEGYIQSKIRILCTKLENLENISLAAP 395
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 198/379 (52%), Gaps = 12/379 (3%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+ LQ + Y + MP+ P P NIT T I
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITECTKKVILQ 326
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
EF+RG T D+ W LFE F + K+ + Y S++ L W G V+S+
Sbjct: 327 EFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGLVESK 385
Query: 435 FRSLILKLEEVQGLCDPNP 453
R L++KLE + G+ +P
Sbjct: 386 VRLLVMKLEVLAGIKIAHP 404
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 210/381 (55%), Gaps = 10/381 (2%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+L+Q + ++ S +E R NV+ K+ ++V W+ V+ + +P + T+
Sbjct: 7 ALIQAIIPFDVIESNDEMQHRMNVLAKVNQLVKQWIVDVSLSKNMPLSIANSVGGNVFTF 66
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVH +DIDALC+ P FF ++LKS+ EV++I V+DA VP+++
Sbjct: 67 GSYRLGVHTKGADIDALCVAPRHVDRTS-FFASFVDLLKSQTEVTQITVVEDAFVPVIKM 125
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
FDGI +D+ +A L + ++PEN+D+L+ LR+LD +SL+G R IL LVP+ +
Sbjct: 126 VFDGIEMDMLFARLGLQNIPENLDLLDLELLRNLDMKCVRSLNGCRVTDAILSLVPNADS 185
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWAKRRG+Y N G+LGGV A+LVA CQ +P T+V FF + W
Sbjct: 186 FRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAVAATIVQKFFLVFNQW 245
Query: 325 PWPTPVMLQ---DPMLPAAGYP----SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
W PV+L + L G+ S+ LM I P PH+ N+++ST + E
Sbjct: 246 NWQQPVLLTRMVESDLNLNGWTPSNFSDRSQLMQIITPVYPHQNSTFNVSKSTKTILLEE 305
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
RG ++ + W FEP + +Y ++ + A+++D+ +W+G V+S+ R
Sbjct: 306 IERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVLTAKATSEDNYKEWIGLVESKLRK 365
Query: 438 LILKLE--EVQGLCDPNPTEY 456
L+L LE E + NP Y
Sbjct: 366 LVLTLERNEYFDIVHINPKSY 386
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 187/341 (54%), Gaps = 13/341 (3%)
Query: 80 EERSLSLVQLMTNE----GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+E L L + +T G+ E +R V+ KL +V W++ V+ + +P I
Sbjct: 31 KEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNIPASVID 90
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
I T+GSY LGVH +DIDALC+ P DFF + LK + EV ++ V+
Sbjct: 91 SVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVE 149
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP+++ FDGI ID+ +A L + ++PEN+D+ + L++LD +SL+G R I
Sbjct: 150 EAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEI 209
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L LVP++E F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 210 LHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVH 269
Query: 316 NFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHEYCHSNIT 367
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 270 KFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVS 329
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
ST + EF RG T ++++ DW LFE + +KY
Sbjct: 330 ASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKY 370
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 205/393 (52%), Gaps = 32/393 (8%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+Q + +E S E R +++ L+ + +V V+ +R + + + T+G
Sbjct: 29 LIQELKSENSFESEAETATRVKILEVLQALTEKFVYTVSKRRNMSDGMARDGGGKVFTFG 88
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID L + P+ + +DFF V +L+ RPE+ EI V DA VP+++ K
Sbjct: 89 SYRLGVHGPGSDIDTLIVVPKHVSR-DDFFDVFDKLLRERPELDEIAPVPDAFVPIIKIK 147
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F G+ IDL A L + VP+ + + + LR+LDE ++L+G R IL+LVP F
Sbjct: 148 FSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPIVF 207
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWA+RR VYGN+ GF GGV A+LVA +CQ +P ++ FFK Y+ W
Sbjct: 208 RIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNACSAVIINRFFKIYSDWK 267
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 268 WPQPVILKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKSI 323
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD------- 426
I E RG T D+ W+ LF+ + KY ++ + +AS ++ GD
Sbjct: 324 ILQELQRGIQITNDIFTNKKTWNDLFKRHDFFYKYKFYLTI--TASTREHTGDDGEKTGG 381
Query: 427 ------WVGWVKSRFRSLILKLEEVQGLCDPNP 453
W G V+S+ R L++KLE ++G+ +P
Sbjct: 382 DEQHLKWSGLVESKARLLVMKLEALEGIKVAHP 414
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 199/383 (51%), Gaps = 20/383 (5%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ + EDFF V +L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHV-IREDFFTVFDALLRERKELDEIAPVPDAFVPIIKI 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGW 430
I EF RG T D+ W LFE F + K+ + Y S++ L W G
Sbjct: 323 VILKEFERGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGL 381
Query: 431 VKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R L++KLE + G+ +P
Sbjct: 382 VESKVRLLVMKLEVLAGIKIAHP 404
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 198/379 (52%), Gaps = 12/379 (3%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+Q + EG + +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 24 SLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTY 83
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V ++L+ R E+ EI V DA VP+++
Sbjct: 84 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 142
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI I L A L VP ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 143 KFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 202
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR VY N+ GF GGV A+LVA +CQ +P ++ FF + W
Sbjct: 203 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 262
Query: 325 PWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+ LQ + Y + MP+ P P NIT ST I
Sbjct: 263 NWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQ 322
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEP--FPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
EF+RG T D+ W LFE F + K+ + Y S++ L W G V+S+
Sbjct: 323 EFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHL-KWSGLVESK 381
Query: 435 FRSLILKLEEVQGLCDPNP 453
R L++KLE + G+ +P
Sbjct: 382 VRLLVMKLEVLAGIKIAHP 400
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 192/356 (53%), Gaps = 16/356 (4%)
Query: 104 KRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCL 163
KR ++ L ++ ++ V + L ++ + A +LT+GSY LGV G +SDIDALCL
Sbjct: 54 KRELILASLNRLLHNFIHSVCIMQGLDEDDANDVSARLLTFGSYRLGVIGPDSDIDALCL 113
Query: 164 GPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSV 223
P+ T DFF V +++L + P VS+IH V DA PL++ +D I ID+ +A L + ++
Sbjct: 114 CPQRIT-RNDFFTVFYDILANHPNVSKIHAVADAYTPLIKLVYDDIDIDILFAILPIPTI 172
Query: 224 PENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYG 283
N+ +L+ LR+LD+ + +S++G R +L VP+ F+ LR IKLWA++RG+Y
Sbjct: 173 SPNLSILDDDILRNLDDITARSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYS 232
Query: 284 NLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPA---- 339
N+ G+LGGV AIL A VCQ +P N ++ FFK Y W W PV++ P
Sbjct: 233 NILGYLGGVAWAILTARVCQLYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPG 292
Query: 340 ---------AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR 390
P + LMPI P P N+T +T + EF R H + +
Sbjct: 293 LMMFKVWDPKTNPQDRLHLMPIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELLK--TQ 350
Query: 391 PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ 446
W+ L EP ++ F+ + + AS++ W GW++SR R LI KLE ++
Sbjct: 351 SQMTWNDLLEPANIFNEFKHFLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIE 406
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 206/397 (51%), Gaps = 22/397 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
SV + +E SL SL++ + + G S KR V+ L+++ +V V+ + +
Sbjct: 13 SVANPTPKENSLNDSLIKELKSRGSFESEAATKKRVEVLHILQKLTEEFVYTVSINKNMN 72
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ + I T+GSY LGV+G SDID L + P+ T + DFF V +L+ RPE+ E
Sbjct: 73 EGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRS-DFFEVFDKILRKRPELEE 131
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I V DA VP+++ +F GI IDL A L + +P+++ + + LR++DE +SL+G R
Sbjct: 132 IASVSDAYVPIIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNIDEKDLRSLNGTR 191
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
IL LVP F+ LRCIK+WA++R +Y N+ GF GGV A+LVA +CQ +P
Sbjct: 192 VTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNAVS 251
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V FF YA W WP PV+L+ +P L YP + + MP+ P P
Sbjct: 252 AVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKL----YPHDRQHRMPVITPAYP 307
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF--EPFPYSKKYARFVRVYL 416
NIT ST I EF RG + + W L F Y K+ +
Sbjct: 308 SMCATHNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTFFYKYKFYLCIVAAT 367
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S++D L W G V+SR R LI KLE +G+ +P
Sbjct: 368 QGSSEDHL-KWGGMVESRLRLLIQKLEMTEGIEIAHP 403
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 187/341 (54%), Gaps = 13/341 (3%)
Query: 80 EERSLSLVQLMTNE----GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+E L L + +T G+ E +R V+ KL +V W++ V+ + +P I
Sbjct: 31 KEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNIPASVID 90
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
I T+GSY LGVH +DIDALC+ P DFF + LK + EV ++ V+
Sbjct: 91 SVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVE 149
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP+++ FDGI ID+ +A L + ++PEN+D+ + L++LD +SL+G R I
Sbjct: 150 EAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEI 209
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L LVP++E F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 210 LHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVH 269
Query: 316 NFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHEYCHSNIT 367
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 270 KFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVS 329
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
ST + EF RG T ++++ DW LFE + +KY
Sbjct: 330 ASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKY 370
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 187/341 (54%), Gaps = 13/341 (3%)
Query: 80 EERSLSLVQLMTNE----GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+E L L + +T G+ E +R V+ KL +V W++ V+ + +P I
Sbjct: 31 KEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNIPASVID 90
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
I T+GSY LGVH +DIDALC+ P DFF + LK + EV ++ V+
Sbjct: 91 SVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVE 149
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP+++ FDGI ID+ +A L + ++PEN+D+ + L++LD +SL+G R I
Sbjct: 150 EAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEI 209
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L LVP++E F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 210 LHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVH 269
Query: 316 NFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHEYCHSNIT 367
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 270 KFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVS 329
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
ST + EF RG T ++++ DW LFE + +KY
Sbjct: 330 ASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKY 370
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 187/341 (54%), Gaps = 13/341 (3%)
Query: 80 EERSLSLVQLMTNE----GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+E L L + +T G+ E +R V+ KL +V W++ V+ + +P I
Sbjct: 31 KEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNIPASVID 90
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
I T+GSY LGVH +DIDALC+ P DFF + LK + EV ++ V+
Sbjct: 91 SVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVE 149
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP+++ FDGI ID+ +A L + ++PEN+D+ + L++LD +SL+G R I
Sbjct: 150 EAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEI 209
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L LVP++E F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 210 LHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVH 269
Query: 316 NFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHEYCHSNIT 367
FF ++ W WP PV+L+ P LP PS+ LMPI P P + N++
Sbjct: 270 KFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVS 329
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
ST + EF RG T ++++ DW LFE + +KY
Sbjct: 330 ASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKY 370
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 210/407 (51%), Gaps = 37/407 (9%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E S +L+Q + + G+ S EE R V+ +L ++V +V R + L + E
Sbjct: 21 DLEVSKTLIQELKDRGIYESAEEGRNREMVLGRLNKLVKEFVYRSSINHGLSDAKAREAG 80
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVHG SDID L + P E+FF + MLK V E+ V +A
Sbjct: 81 GKIFTFGSYRLGVHGPGSDIDTLLVVPRHVER-EEFFSLFEQMLKETEGVLEVTGVPEAF 139
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ F GI IDL +A L V +VP+++D+ + LR++D+ +SL+G R +L+L
Sbjct: 140 VPIIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDDRCLRSLNGSRVTDEMLRL 199
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA--- 315
VPD+ F+ LR IKLWA++R +YGN+ GF GGV A+LVA +CQ +PKG + ++++
Sbjct: 200 VPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVARICQLYPKGCVGSIISRCV 259
Query: 316 -----------------NFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSET 346
FF W WP PV+L+ +P L YPS+
Sbjct: 260 MCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPLQVRVWNPKL----YPSDR 315
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSK 406
MPI P P N+T ST + EF R + + W LF+P +
Sbjct: 316 SHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGSAKWSELFQPHDFFS 375
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
KY ++++ S+ + D W G V+SR R L++KLE V L +P
Sbjct: 376 KYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLEYVDTLLLAHP 422
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 219/428 (51%), Gaps = 25/428 (5%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D D + L++ + EE DKR V++ L +V WVK V +
Sbjct: 17 PISVAYPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNVT-AIK 75
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+P A + T+GSY LGVH S +DID L + P + DFF ML P V
Sbjct: 76 IPSGDGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNQDPNV 134
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+H V++A VP+M+ K+ G+ +D+ +A L + VP+N ++ + LR+LD S +SL+G
Sbjct: 135 TELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDAESIRSLNG 194
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R + +L+LVP ++F LR IK+WAK G+Y N GF GG+ AIL+A CQ +P
Sbjct: 195 CRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQLYPNA 254
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQ--------DPMLPAAGYPSETRS-----LMPIRLP 355
S + LV F ++ W WP PV+L+ P L + E +S LMPI P
Sbjct: 255 SPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMPIITP 314
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY 415
P + N+TRS+ I+ E + W LFE + +Y F+ +
Sbjct: 315 AFPEQNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFEEVNFFSRYKHFIALI 374
Query: 416 LSASNQDDLGDWVGWVKSRFRSLILKLEE----VQGLCDPN---PTEYIDVDVTEPH--- 465
++A N+++ + G+++SR R L+ LE + DPN P++ DV+ +
Sbjct: 375 MAAPNEEEELSYGGFLESRIRLLVQSLERNPDIILAHNDPNKHKPSKNAKFDVSPENKRI 434
Query: 466 IVFYWGLQ 473
V++ GL+
Sbjct: 435 TVWFIGLE 442
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 210/400 (52%), Gaps = 20/400 (5%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + ER+ +L++ + +G EE KR V+ L+ + +VK+V +
Sbjct: 14 PISVATPTDKEVERNQALIEELKKQGSFEGAEESQKRVLVLNTLQNLTEGFVKKVCANKG 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSR-PE 187
+P+ I + I TYGSY LGV+ SDID L + P T DFF L ML+ P
Sbjct: 74 MPEHIIKNSGGKIFTYGSYRLGVYAPGSDIDTLLVTPAHITR-HDFFATLPAMLQELVPP 132
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLRDLDETSWKSL 246
++ V DA VP+++FK I IDL +A L +V SVP+++ + + LR DE + + L
Sbjct: 133 PEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKELLRGCDEVNLRCL 192
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP 306
+G R IL LVP F+ LR IKLWA+RR +Y N+ GF GGV A+LVA +CQ +P
Sbjct: 193 NGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAMLVARICQLYP 252
Query: 307 KGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRL 354
+++ FFK A+W WP PV+L+ +P + YPS+ LMPI
Sbjct: 253 MAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKI----YPSDRGHLMPIIT 308
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVR 413
P P NIT+ST I E +M + W LFE ++ Y ++
Sbjct: 309 PAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFFTNGYRYYLS 368
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
V +A ++D L W G V+S+ R L++KLE ++ + +P
Sbjct: 369 VVAAAKDKDTLLGWSGLVESKLRHLVMKLEILETIKLAHP 408
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 202/390 (51%), Gaps = 19/390 (4%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
SF P D + E SL+ + + + EE +RR + +L+EI AW+++ A
Sbjct: 23 SFKKPTEQDFRDTQELEASLAQLNIFETQ------EEISQRREALVRLQEISNAWIRQKA 76
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
++ LP T I T+GSY LGV+ +DID+L + P F T E+FF +L
Sbjct: 77 LEQNLPAHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFIT-REEFFSDFQTVLAE 135
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL--NPFFLRDLDETS 242
V ++H V DA VP+++ KF G+ IDL +A + +S+PEN + +R++DE
Sbjct: 136 NSNVEDLHAVVDAFVPVLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERD 195
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+S++GVR + IL LV + F+ L+ I++WAKRR VY N GFLGGV AILV+ +C
Sbjct: 196 VRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRIC 255
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD---------PMLPAAGYPSETRSLMPIR 353
Q +P + + +V FF ++ WPWP PV L++ P+ PS+ LMPI
Sbjct: 256 QLYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPIL 315
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
P P + N+ RS I E +G N R M W LFE + +Y +V
Sbjct: 316 TPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEA-AFFFQYRHYVV 374
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
V + + + + G V+SR R L+ E
Sbjct: 375 VIVVGNTKHTFIELCGLVESRLRVLVSNFE 404
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 219/405 (54%), Gaps = 14/405 (3%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E + L + + G+ S +E +R V+ KL E+V W+ V+ ++ +P+
Sbjct: 31 DLELTKRLEEALIPYGVFESEDELQQRMIVLAKLNELVKEWIVEVSIKKNMPENVAKTVG 90
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GS+ LGVH +DID L + P A DFF +++LK+ P+V E+ V++A
Sbjct: 91 GKIFTFGSFRLGVHTKGADIDTLLVAPRHIDRA-DFFSSFYDLLKNHPDVRELRAVENAF 149
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ F I +DL +A L +P+N+D+L+ L++LD +SL+G R IL+
Sbjct: 150 VPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLLKNLDPKCVRSLNGCRVTDEILRQ 209
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++E F+ LR +KLWAK+ GVY N+ GFLGGV AILVA CQ +P + +TL+ FF
Sbjct: 210 VPNIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWAILVARTCQLYPNAAASTLLQKFF 269
Query: 319 KTYAYWPWPTPVMLQDPMLPAA---GY--------PSETRSLMPIRLPCSPHEYCHSNIT 367
++ W WP PV+L++ P+ G+ P + LMPI P P + +++
Sbjct: 270 LVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGDRYHLMPIITPAYPQQNFSFSVS 329
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
ST + EF T D++ +W LF P + KY ++ + S++ +++ +W
Sbjct: 330 MSTRKIMCDEFFIRLKNTEDVISGKANWDILFTPPNFFHKYKHYIVLSASSNTEEEHLEW 389
Query: 428 VGWVKSRFRSLILKLE--EVQGLCDPNPTEYIDVDVTEPHIVFYW 470
+G V+S+ R LI LE E L NP Y +D V W
Sbjct: 390 IGLVESKVRLLISYLENNEYIKLAHVNPKSYGPLDSEGEKHVTRW 434
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 193/368 (52%), Gaps = 10/368 (2%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
L++ + +G S E +KR+ V+ ++++ +V++V+ ++ + I T+
Sbjct: 26 ELIEELKRQGSFESEAESNKRKKVLLIMQQLAQEYVRQVSLKKNFSDGMARDAGGKIFTF 85
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V +L+ RPE+ EI V DA VP+++
Sbjct: 86 GSYSLGVHGPGSDIDTLIVVPKHVTR-EDFFEVFERLLRERPELEEISAVPDAFVPIIKV 144
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L + VP ++ + + LR++D+ ++L+G R IL+LVP+
Sbjct: 145 KFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDDKDLRALNGTRVTDDILRLVPNKTV 204
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IK+WA+ R VYGN+ GF GGV ILVA VCQ +P +++ FF W
Sbjct: 205 FKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVARVCQLYPNAVAAVILSRFFNVLLRW 264
Query: 325 PWPTPVML---QDPMLPAAG-----YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+L +D L A Y + MPI P P NIT ST I
Sbjct: 265 RWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPIITPAYPSMCATHNITASTQKVILR 324
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR-VYLSASNQDDLGDWVGWVKSRF 435
E RG ++M W LFE + Y ++ V S + W G+V+S+
Sbjct: 325 ELERGGQILNEIMLGQKPWSALFEKHHFFSDYKYYLSIVAASKGTAEQQLKWSGFVESKL 384
Query: 436 RSLILKLE 443
R L+ KLE
Sbjct: 385 RHLVQKLE 392
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 215/403 (53%), Gaps = 27/403 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRR----NVIQKLKEIVLAWVKRVA 124
P++ ++ + + +L+ + + S + KR+ V++ L I +VKRVA
Sbjct: 13 PISSALPTEAENHAMQTLIDELRRQNTFESPADTQKRQMPSEKVLEHLARICDEFVKRVA 72
Query: 125 WQRRLPKEQ-IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
+R + I + I TYGSY LGV+G SDID L + P++ T A D+F + ++LK
Sbjct: 73 REREKGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIFPDLLK 131
Query: 184 SRP---EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPENVDVLNPFFLRDLD 239
++++ V DA VP+++F+F GI IDL ++ + +L +P++ +V + LR LD
Sbjct: 132 EMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLRGLD 191
Query: 240 ETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA 299
E +SL+G R IL LVP+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA
Sbjct: 192 EAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVA 251
Query: 300 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETR 347
VCQ +PK + + +V FF WPWP PV+L+ +P L Y +
Sbjct: 252 RVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKL----YKGDQF 307
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSK 406
LMP+ P P NITRS I+ E RG + T +M W LF +++
Sbjct: 308 HLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFFTQ 367
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
Y ++ V S+++++ W G+V+S+ R L+ LE+ Q +
Sbjct: 368 GYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQHQSIA 410
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 197/382 (51%), Gaps = 20/382 (5%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+ + G S + KR V+ + +V +V V+ + + + + T+G
Sbjct: 28 LISELKARGSFESEQATKKRVEVLTLFQNMVQEFVYTVSKNKNMSDGMARDAGGKVFTFG 87
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGV+G SDID L + P+ EDFF V +++ RPE+ EI V DA VP+++ +
Sbjct: 88 SYRLGVYGPGSDIDTLVVVPKHVG-REDFFTVFEQIIRKRPELEEITSVPDAFVPIIKIE 146
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI IDL Y+ L+V VP ++ + + L+++DE +SL+G R ILQLVP F
Sbjct: 147 FDGISIDLIYSRLNVPRVPLDMTLEDKNLLKNIDEKDLRSLNGTRVTDEILQLVPKPTVF 206
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LRCIK+WA++R VYGN+ GF GGV A+L A +CQ +P T+V FF Y W
Sbjct: 207 KHALRCIKMWAQQRAVYGNVFGFPGGVAWAMLTARICQLYPNAVGATIVEKFFTIYTKWN 266
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P L YP + + MP+ P P NIT ST
Sbjct: 267 WPQPVLLKPIEDGPLQVRVWNPRL----YPHDRQHRMPVITPAYPSMCATHNITSSTQKV 322
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG--DWVGWV 431
I E RG + + W LFE + Y +F ++A+ DD W G +
Sbjct: 323 IMKELERGAEIMSLVASGEKTWADLFERHSFFHDY-KFYLCIVAATLADDEEHHKWSGMI 381
Query: 432 KSRFRSLILKLEEVQGLCDPNP 453
+S+ R L+ KLE G+ +P
Sbjct: 382 ESKLRILVQKLEVTDGIALAHP 403
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 202/387 (52%), Gaps = 17/387 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
++E +++L++ + + + EE R V+ ++ +V V ++ L +
Sbjct: 23 EKEVTITLLEELKKQKTIEGEEEARTREIVLGRVAALVKKCVHEISLANGLSESAANAAG 82
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGVHG SDID LC+ P+ + E++F V L+ V+E+ V +A
Sbjct: 83 GKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EEWFDVFERRLREMDGVTEVSGVPEAF 141
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ K GI ID A L + S+PE++D+ + LR+LDE +SL+G R IL+L
Sbjct: 142 VPVIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLLRNLDERCVRSLNGSRVTDAILRL 201
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP++ F+ LRCIKLWA R+ +Y N++GFLGGV A+LVA VCQ +P +V+ FF
Sbjct: 202 VPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAMLVARVCQLYPNACAGAIVSRFF 261
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
W WP PV+L+ +P L YP++ MPI P P N+
Sbjct: 262 IIMYQWKWPQPVLLKTIEEGPLNVRVWNPKL----YPTDRAHRMPIITPAYPAMCATHNV 317
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGD 426
ST I E +G ++ DW LF + KY +++V S N D
Sbjct: 318 MASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKYRYYLQVIASTGNADLQLK 377
Query: 427 WVGWVKSRFRSLILKLEEVQGLCDPNP 453
W G V+SR R L++KLE V L +P
Sbjct: 378 WSGTVESRIRQLVMKLEYVDSLTLAHP 404
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 217/403 (53%), Gaps = 27/403 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEE----DKRRNVIQKLKEIVLAWVKRVA 124
P++ ++ +++ + +L++ + + + + + R VI L++I +VKRVA
Sbjct: 13 PISTALPTELENQAKEALIEELKKQNTFETRQSNPFLGESRYQVINHLQQICDEFVKRVA 72
Query: 125 WQRRLPKEQ-IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
+R E I + I TYGS+ LGV+G SDID L + P++ T + D+F + +LK
Sbjct: 73 RKREEGNEALIRDARGQIFTYGSFRLGVYGPGSDIDTLVVAPKYVTRS-DYFEIFPGLLK 131
Query: 184 SRP---EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPENVDVLNPFFLRDLD 239
++++ V+DA VP+++F+F GI IDL ++ + +L +P+ +V + LR LD
Sbjct: 132 EMAPSDAITDMAVVEDAFVPIIKFEFFGISIDLIFSRIAMLKQLPKEFNVQDSGLLRGLD 191
Query: 240 ETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA 299
E +SL+G R IL LVP+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA
Sbjct: 192 EAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVA 251
Query: 300 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR------------ 347
VCQ +PK + + +V FF WPWP PV+L++ G P + R
Sbjct: 252 RVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKN----VEGGPLQVRVWNPKVYKGDQF 307
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSK 406
LMP+ P P NITRS I+ E RG T ++M W LF +++
Sbjct: 308 HLMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKNPWSDLFVKHTFFTQ 367
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
Y ++ V ++++++ W G+V+S+ R L+ LE+ Q +
Sbjct: 368 GYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQHQSIA 410
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 210/388 (54%), Gaps = 14/388 (3%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ ++ + + S +L++ + + S + KR ++ L+ I ++K+V+ +
Sbjct: 14 PLSTALPTDSENQASSALIEELKRQNNYESVVDTQKRTEALKALQAITEEFIKQVSKAQG 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP-- 186
LP I TYGS+ LGV G SDID L +GP+ T +DFF ++L +
Sbjct: 74 LPDSVANSASGKIFTYGSFRLGVFGPGSDIDTLVVGPKHVTR-DDFFKYFPDLLVTMSPP 132
Query: 187 -EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLDETSWK 244
++++ V D+ VP+++F++ GI IDL ++ + VL+ +P+++ + + LR LDE +
Sbjct: 133 GAITDLTPVVDSFVPIIKFEYAGISIDLIFSRIAVLNQIPQSLTLQDSNLLRGLDEADLR 192
Query: 245 SLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN 304
SL+G R IL LVP F+ LR IKLWA+RR +Y N+ GF GGV A+LVA VCQ
Sbjct: 193 SLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGGVAWAMLVARVCQL 252
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPC 356
+PK + +T+V FF+ W WPTPV+ LQ + Y ++ LMPI P
Sbjct: 253 YPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPIITPA 312
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVY 415
P NITRST I+ E RG N T +M W LF +++ Y ++ V
Sbjct: 313 YPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTFFTEGYKYYLSVI 372
Query: 416 LSASNQDDLGDWVGWVKSRFRSLILKLE 443
+++ ++ W G V+S+ R L+L LE
Sbjct: 373 SASTTREAQNIWGGLVESKIRLLVLSLE 400
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 216/403 (53%), Gaps = 27/403 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRR----NVIQKLKEIVLAWVKRVA 124
P++ ++ + + +L+ + + S + +KR+ V++ L I +VKRVA
Sbjct: 13 PISLALPTEAENHAMQTLIDELRRQNTFESPTDTEKRQALSETVLEHLARICDEFVKRVA 72
Query: 125 WQRRLPKEQ-IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
+R + I + I TYGSY LGV+G SDID L + P++ T A D+F + ++LK
Sbjct: 73 RKREEGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIFPDLLK 131
Query: 184 SRP---EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLD 239
++++ V DA VP+++F+F GI IDL ++ + +L +P++ +V + LR LD
Sbjct: 132 EMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLRGLD 191
Query: 240 ETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA 299
E +SL+G R IL LVP+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA
Sbjct: 192 EAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVA 251
Query: 300 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETR 347
VCQ +PK + + +V FF WPWP PV+L+ +P L Y +
Sbjct: 252 RVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKL----YKGDQF 307
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSK 406
LMP+ P P NITRS I+ E RG + T +M W LF +++
Sbjct: 308 HLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRSPWSDLFVKHTFFTQ 367
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
Y ++ V S+++++ W G+V+S+ R L+ LE+ Q +
Sbjct: 368 GYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQHQSIA 410
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 194/382 (50%), Gaps = 18/382 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
L+Q + E S +E R V++ L+E+ +V V+ ++ + + I TY
Sbjct: 28 ELIQELKKENSFESEQETANRVKVLKTLQELTEKFVYEVSKKKNMSDGMARDAGGKIFTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ T EDFF V +L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDALLREREELDEIAPVPDAFVPIIKL 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
KF GI IDL A L + V ++ + + LR+LDE ++L+G R IL+LVP
Sbjct: 147 KFSGISIDLICAKLDIAQVKPSLTLDDKALLRNLDEKDLRALNGTRVTDEILELVPKPSV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IK+WA+RR +Y N+ GF GGV A+LVA +CQ +P ++ FFK + W
Sbjct: 207 FRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILSEW 266
Query: 325 PWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 267 KWPQPVILKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITESTKA 322
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWV 431
I E RG T D+ W LF + +Y ++ + + D+ W G V
Sbjct: 323 VILKELNRGIQVTNDIFAYKKTWADLFTKHDFFFQYKYYLTITAATRGDDEEHLKWSGLV 382
Query: 432 KSRFRSLILKLEEVQGLCDPNP 453
+S+ R L LKLE + G+ +P
Sbjct: 383 ESKLRLLTLKLETIPGIKLAHP 404
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 198/378 (52%), Gaps = 10/378 (2%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
L+Q + E + E +KR N+++ L+++ +V RV+ ++ + ++ + T+
Sbjct: 28 ELIQELKKENSFETELETEKRVNILKTLQKLTEEFVYRVSKKKNMSDGMARDSGGKVFTF 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGVHG SDID L + P+ + +DFF + +L+ R E+ EI V DA VP+++
Sbjct: 88 GSYRLGVHGPGSDIDTLIVVPKHVSR-DDFFTIFAELLRGREEIEEIAPVPDAFVPIIKT 146
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+F GI IDL A L + +P ++ + + LR+LDE ++++G R IL+LVP
Sbjct: 147 QFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNLDEKDLRAINGTRVTDEILELVPKPNV 206
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR +K+WA RR +Y N+ GF GGV A+LVA +CQ +P ++ FFK W
Sbjct: 207 FRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILLEW 266
Query: 325 PWPTPVM--------LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+ LQ + Y + MP+ P P NIT ST I
Sbjct: 267 KWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITDSTKKVILQ 326
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWVKSRF 435
EF RG T D+ W LF+ + KY ++ V S + W G+V+S+
Sbjct: 327 EFERGVQVTNDIFTNKKTWADLFKKHEFFHKYKFYLTVVASTRGSTEQHLKWSGFVESKL 386
Query: 436 RSLILKLEEVQGLCDPNP 453
R L+LKLE + G+ +P
Sbjct: 387 RLLVLKLETLAGIKLAHP 404
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 197/353 (55%), Gaps = 7/353 (1%)
Query: 97 PSTEEED-KRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSE 155
P+TEE+ KR+ V+ K+K ++ +V+ +A + E + + ++ YGSY LGV
Sbjct: 38 PATEEQKTKRQEVLSKIKILINEFVRIIAKKTGNTAEGLENVESQLVPYGSYRLGVVSEG 97
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
SDID + + P F + DFF + M+ + P V E+ V++A P+M F +DGI IDL +
Sbjct: 98 SDIDCIVVAPSFVKRS-DFFNTFYEMMINHPSVKELVKVENAYSPIMSFHYDGIEIDLSF 156
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLW 275
A L + +V E+ D + L ++DE S +SL+G R N +LQLVP+ + F+ VLR +++W
Sbjct: 157 ASLAMTTVAEDTDFADDHILDNVDEESVRSLNGRRVNDMLLQLVPNQDIFRVVLRFLRIW 216
Query: 276 AKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDP 335
AK+R VYGN+ G+LGGV+LAIL A +CQ +PK S ++ FF A W WP P+ + P
Sbjct: 217 AKKRCVYGNVFGYLGGVNLAILAAFICQRYPKKSPAYIIVMFFNDLATWTWPEPIYINTP 276
Query: 336 MLPAAGYPSETRS-----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR 390
TR MPI P P + T+S+ ++ EF RG ++
Sbjct: 277 TTGNRSNWDPTRQQDHKDCMPIITPAYPTINSLHSATKSSRNRMTVEFKRGFKVASACLK 336
Query: 391 PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W + + + ++ +FV V + A+ + +++ +V+SR R L + +E
Sbjct: 337 SEASWERIIDSPKFFVRHRKFVEVLVVATEEKVYTEFMKFVQSRVRFLAINIE 389
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 216/401 (53%), Gaps = 20/401 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ ++ +++ + +L++ MT E L S + +KR V+ L+ I +VKRV ++
Sbjct: 14 PLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITEEFVKRVCRKQN 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE- 187
LP+ + I TYGS+ LGV+G SDID L + P+ + E F + +++ PE
Sbjct: 74 LPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFELFPDLLVEMAPEG 133
Query: 188 -VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLDETSWKS 245
+ ++ V +A VP+++F++ GI IDL +A + VL+ + ++ + + L LDE +S
Sbjct: 134 AIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLTGLDEAGLRS 193
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH 305
L+G R IL LVP+ F+ LR +KLWA+RR +Y N+ GF GGV A+LVA VCQ +
Sbjct: 194 LNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLY 253
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIR 353
P+ + +T++ FF+ + W WP PV+LQ +P + Y + LMPI
Sbjct: 254 PQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRV----YKGDGYHLMPII 309
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFV 412
P P NIT+ST I E RG N T +M W LF ++K Y ++
Sbjct: 310 TPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYL 369
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
V +++ ++ W G V+S+ R L+ +E + + +P
Sbjct: 370 SVISASTTKEAQLIWAGLVESKVRLLVANVENHESIALAHP 410
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 199/372 (53%), Gaps = 25/372 (6%)
Query: 99 TEEEDKRR----NVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+E KRR N++QKL E +V V+ ++ + + I T+GSY LGV+G
Sbjct: 40 SENATKRRVEVLNIMQKLTE---EFVYIVSKRKNMSDGMAKDAGGKIFTFGSYRLGVYGQ 96
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID L + P+ +DFF V ++LK R E+ EI V DA VP+++ +F GI IDL
Sbjct: 97 GSDIDTLVVVPKHVNR-QDFFDVFVDLLKKRSELEEITSVPDAFVPIIKMEFGGISIDLI 155
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+A L + VP ++ + N L++LDE +SL+G R IL LVP F+ LRCIK+
Sbjct: 156 FAKLDIPRVPRDLTLDNKNLLKNLDEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKM 215
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ- 333
WA++R +Y N+ GF GGV A+LVA +CQ +P +V FF+ Y+ W WP PV+L+
Sbjct: 216 WAQQRAIYANVFGFPGGVAWAMLVARICQLYPNTVSAVIVEKFFQIYSQWNWPQPVLLKQ 275
Query: 334 -----------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
+P L YP + + MP+ P P NIT+ST I +EF RG
Sbjct: 276 IEDGPLQVRVWNPRL----YPHDRQHRMPVITPAYPSMCATHNITKSTKDVIMSEFNRGV 331
Query: 383 NTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLGDWVGWVKSRFRSLILK 441
N + W LFE + +Y ++ V + S+ + W G ++S+ R L+ K
Sbjct: 332 NVMAQIHAGTASWGLLFERHRFFFQYKFYLCIVAATKSSSAEHLKWSGMIESKVRLLVQK 391
Query: 442 LEEVQGLCDPNP 453
LE +G+ +P
Sbjct: 392 LELTEGITLAHP 403
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 208/388 (53%), Gaps = 18/388 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D+E + L++ + G S KR V+ L+++ +V V+ ++ + + +
Sbjct: 26 DKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYEVSLRKNMTQGMAKDAG 85
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGV+G SDIDAL + P T EDFF V +L+ RPE+ EI+ VK+A
Sbjct: 86 GKIFTFGSYRLGVYGPSSDIDALVVVPRHVT-REDFFTVFEKILRGRPELEEINSVKEAF 144
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +F GI IDL +A L + VP ++ + + L+++DE ++L+G R IL+L
Sbjct: 145 VPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTRVTDEILRL 204
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP F+ LR IK+WA++R VY N++GF GGV A+LVA +CQ +P ++ FF
Sbjct: 205 VPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLYPNAVSAVILEKFF 264
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
+ Y+ W WP PV+L+ +P L Y + + MP+ P P NI
Sbjct: 265 QIYSQWNWPQPVLLKQIEDGPLQVRVWNPRL----YAMDRQHRMPVITPAYPSMCATHNI 320
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLG 425
T ST I EF RG ++ W L E + +Y ++ V + SN ++
Sbjct: 321 TNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVAATKSNAEEHL 380
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ G V+S+ R L+ KLE+V G+ +P
Sbjct: 381 KYSGMVESKLRLLVQKLEQVDGVELAHP 408
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 208/388 (53%), Gaps = 18/388 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D+E + L++ + G S KR V+ L+++ +V V+ ++ + + +
Sbjct: 21 DKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYEVSLRKNMTQGMAKDAG 80
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGV+G SDIDAL + P T EDFF V +L+ RPE+ EI+ VK+A
Sbjct: 81 GKIFTFGSYRLGVYGPSSDIDALVVVPRHVT-REDFFTVFEKILRGRPELEEINSVKEAF 139
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +F GI IDL +A L + VP ++ + + L+++DE ++L+G R IL+L
Sbjct: 140 VPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTRVTDEILRL 199
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP F+ LR IK+WA++R VY N++GF GGV A+LVA +CQ +P ++ FF
Sbjct: 200 VPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLYPNAVSAVILEKFF 259
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
+ Y+ W WP PV+L+ +P L Y + + MP+ P P NI
Sbjct: 260 QIYSQWNWPQPVLLKQIEDGPLQVRVWNPRL----YAMDRQHRMPVITPAYPSMCATHNI 315
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLG 425
T ST I EF RG ++ W L E + +Y ++ V + SN ++
Sbjct: 316 TNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVAATKSNAEEHL 375
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ G V+S+ R L+ KLE+V G+ +P
Sbjct: 376 KYSGMVESKLRLLVQKLEQVDGVELAHP 403
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 208/404 (51%), Gaps = 22/404 (5%)
Query: 67 NFPLNP--SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKR 122
N+ + P S + +E SL SL++ + G S KR V+ +L+++ +V
Sbjct: 5 NYGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAEKFVYE 64
Query: 123 VAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNML 182
V+ Q+ + + I T+GSY LGV+G SDIDAL + P+ T DFF V +L
Sbjct: 65 VSLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTR-NDFFEVFEKIL 123
Query: 183 KSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETS 242
+ R E+ EI V DA VP+++ +GI IDL +A L V VP+++ + + LR++DE
Sbjct: 124 RERKELEEIAAVPDAYVPIIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKD 183
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP F+ LRCIK+WA++R +Y N+ GF GGV A+LVA +C
Sbjct: 184 LRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARIC 243
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLM 350
Q +P +V FF YA W WP PV+L+ +P L YP + + M
Sbjct: 244 QLYPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRL----YPHDRQHRM 299
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYAR 410
P+ P P NIT ST I EF RG + + + W L + Y
Sbjct: 300 PVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTFFHNYKF 359
Query: 411 FV-RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
++ V + + ++ W G V+SR R L+ KLE +G+ +P
Sbjct: 360 YLCIVAATKGSYEEHIKWSGMVESRLRILVQKLELTEGIELAHP 403
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 195/364 (53%), Gaps = 9/364 (2%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S EE DKR V+ +L++I L +V++V+ + + + + I TYGSY LGV+ SD
Sbjct: 96 SPEESDKRAKVLGELQKITLEFVQKVSLDKHMTESMARDAGGKIFTYGSYRLGVYSPGSD 155
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID L + P T E+FF +L++RPEV+ I V DA VP+++FKF GI IDL +A
Sbjct: 156 IDTLMVVPRHVT-RENFFTDFEQILRNRPEVTGITAVPDAYVPIIKFKFSGIPIDLIFAR 214
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + VP ++ + + L++++E SL+G R IL+LVP+ F+ LR IKLWA+
Sbjct: 215 LALAQVPMDLTLEDNNLLKNVEERCVLSLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQ 274
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVM------ 331
+R +Y N+ GF GGV A+LVA +CQ +P ++A FF+ + W WP PV+
Sbjct: 275 QRAIYSNVMGFPGGVAWAMLVARICQLYPNAVSAVVIAKFFRILSQWKWPQPVLLKPIED 334
Query: 332 --LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
LQ + Y + MPI P P NIT ST I E R + ++
Sbjct: 335 GPLQVRVWNPKIYKGDQAHRMPIITPAYPSMCSTHNITESTQKVIINEMNRAGDIADKIL 394
Query: 390 RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
W LF + +Y ++ + ++ + + W G V+S+ R L+L+LE V +
Sbjct: 395 NGTLPWSTLFAKHTFFHQYKYYLVIVAASKSAEMQLKWSGLVESKVRQLVLRLEYVDEIK 454
Query: 450 DPNP 453
+P
Sbjct: 455 LAHP 458
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 223/456 (48%), Gaps = 35/456 (7%)
Query: 76 DQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
DQ D + L+ + EE +KR V++ L +V WVK+V ++P + A
Sbjct: 24 DQKDIVMTDQLIATLKKFNSYEPKEETEKRMEVLRSLNRLVKEWVKKVT-AIKIPSGEGA 82
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
+ T+GSY LGVH S +DID L + P DFF ML+ P V+E+H V+
Sbjct: 83 NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSFKEMLRQDPNVTELHGVE 141
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP+M+ K+ G+ +D+ +A L + VP+ D+ + LR+LD+ S +SL+G R + +
Sbjct: 142 EAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNLDQESVRSLNGCRVAELL 201
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L+LVP ++F LR IKLWAK G+Y N GF GG+ AILVA CQ +P S + +V
Sbjct: 202 LKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILVARACQLYPNASASRIVH 261
Query: 316 NFFKTYAYWPWPTPVMLQ-------------DPMLPAAGYPSETRSLMPIRLPCSPHEYC 362
F ++ W WP PV+L D + S+ LMPI P P +
Sbjct: 262 RMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPIITPAFPEQNS 321
Query: 363 HSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRV----YLSA 418
N+TRST + IR E G +D+ W LF+ + +Y ++ + Y+
Sbjct: 322 THNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFKEVKFFSRYKHYIGISDHGYIHR 381
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLEEVQGLC---------DPNPTEYIDVDVTEPHI-VF 468
+L W +++SR R L+ LE Q + P+P DV I ++
Sbjct: 382 RRGIEL--W-RFLESRIRLLVQSLERNQDILIAHNDTNKHRPSPNAKFDVRPENTRITIW 438
Query: 469 YWGLQPGR--TNLLDIVAVEKDFLKNIHNGFQGSPG 502
+ GL+ TN LD+ + + F N+ G G
Sbjct: 439 FIGLEFAEHATN-LDLTSEIQRFRTNVELQASGVKG 473
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 211/400 (52%), Gaps = 25/400 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + + +S +L++ + + S E KR V+ ++ I A+V+RVA Q +
Sbjct: 12 PISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQTICDAFVRRVA-QEK 70
Query: 129 LPKEQ--IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS-- 184
PK + I + TYGSY LGV+G SDID L + P++ T ED+F ++L S
Sbjct: 71 EPKNEVLIRNARGKVFTYGSYRLGVYGPGSDIDTLIVAPKYVTR-EDYFKFFPDLLLSMA 129
Query: 185 -RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRDLDETS 242
+ ++++ V DA VP+++F++ GI IDL ++ + P+ D+ + LR LDE
Sbjct: 130 PKDAITDMAVVTDAFVPIIKFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLRGLDEAE 189
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP+ F+ LR IKLWA+RR VY N+ GF GGV A+LVA VC
Sbjct: 190 LRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVC 249
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLM 350
Q +PK + + +V FF + W WP PV+L+ +P L Y +T LM
Sbjct: 250 QLYPKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKL----YKGDTYHLM 305
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYA 409
P+ P P NITRS+ I E R + +M W LF ++ Y
Sbjct: 306 PVITPAYPSMCATFNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFFTAGYK 365
Query: 410 RFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
++ V +A ++ W G+V+S+ R L+ KLE+ Q +
Sbjct: 366 YYISVTSAAKTKEAHTIWSGYVESKVRMLVQKLEQHQSIA 405
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 216/401 (53%), Gaps = 20/401 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ ++ +++ + +L++ MT E L S + +KR V+ L+ I +VKRV ++
Sbjct: 14 PLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITEEFVKRVCRKQN 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE- 187
LP+ + I TYGS+ LGV+G SDID L + P+ + E F + +++ PE
Sbjct: 74 LPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFELFPDLLVEMAPEG 133
Query: 188 -VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLDETSWKS 245
+ ++ V +A VP+++F++ GI IDL +A + VL+ + ++ + + L LDE +S
Sbjct: 134 AIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLTGLDEAGLRS 193
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH 305
L+G R IL LVP+ F+ LR +KLWA+RR +Y N+ GF GGV A+LVA VCQ +
Sbjct: 194 LNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLY 253
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIR 353
P+ + +T++ FF+ + W WP PV+LQ +P + Y + LMPI
Sbjct: 254 PQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRV----YKGDGYHLMPII 309
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFV 412
P P NIT+ST I E RG N T +M W LF ++K Y ++
Sbjct: 310 TPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYL 369
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
V +++ ++ W G V+S+ R L+ +E + + +P
Sbjct: 370 SVISASTTKEAQLIWAGLVESKVRLLVANVENHESIALAHP 410
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 203/390 (52%), Gaps = 19/390 (4%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
SF P + D + E SL+ + + + EE +RR + +L+EI W+++ A
Sbjct: 19 SFKKPTEQDLKDTQELEASLAQLNIFETQ------EEISQRREALVRLQEISNGWIRQKA 72
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
++ LP T I T+GSY LGV+ +DID+L + P F T E+FF +L
Sbjct: 73 LEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITR-EEFFSDFQTVLAE 131
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL--NPFFLRDLDETS 242
P V ++H V DA VP+++ KF G+ IDL +A + +S+PEN + +R++DE
Sbjct: 132 NPNVEDLHAVVDAFVPVVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERD 191
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+S++GVR + IL LV + F+ L+ I++WAKRR VY N GFLGGV AILV+ +C
Sbjct: 192 VRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRIC 251
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD---------PMLPAAGYPSETRSLMPIR 353
Q +P + + +V FF ++ WPWP PV L++ P+ PS+ LMPI
Sbjct: 252 QLYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPIL 311
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
P P + N+ RS I E +G N R M W LFE + +Y +V
Sbjct: 312 TPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEA-AFFFQYRHYVV 370
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
V + + + + G V+SR R L+ E
Sbjct: 371 VIVVGNVKHTFIELCGLVESRLRVLVSNFE 400
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 200/389 (51%), Gaps = 20/389 (5%)
Query: 80 EERSLS--LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
EE L+ LV + +G S KR V++ L+++ +V V+ + + + +
Sbjct: 376 EETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVSKSKNMDEGMAKDA 435
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I T+GSY LGV+G SDID L + P+ EDFF V +L+ RPE+ EI V DA
Sbjct: 436 GGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINR-EDFFTVFEKILRQRPELEEIQSVPDA 494
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ +FDGI IDL A L + VP N+ + + L+++DE ++L+G R IL
Sbjct: 495 FVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLRALNGTRVTDEILL 554
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IK+WA+RR VYGN+ GF GGV A+LVA +CQ +P +++ F
Sbjct: 555 LVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIISKF 614
Query: 318 FKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSN 365
F W WP PV+L+ +P L YP + MP+ P P N
Sbjct: 615 FVILGQWNWPQPVLLKPIEDGPLQVRVWNPRL----YPHDKYHKMPVITPAYPSMCATHN 670
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS-NQDDL 424
IT ST I EF RG ++ W LF + ++Y ++ V + + ++
Sbjct: 671 ITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTVIAATKGSSEEQ 730
Query: 425 GDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ G V+S+ R L+ KLE + + +P
Sbjct: 731 KKFAGMVESKLRLLVQKLENNENINLAHP 759
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 179/314 (57%), Gaps = 14/314 (4%)
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIH---CVKDAKVPLMRFKFDGILID 212
+DIDALC+ P DFF LK E+ ++ CV+DA VP+++FKFDGI ID
Sbjct: 110 ADIDALCVAPRHVERT-DFFQSFFEKLKQHEEIKDLRVCLCVEDAFVPVIKFKFDGIEID 168
Query: 213 LPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
L +A L + S+P+N+D+ L++LD +SL+G R IL LVP+ E F+ LR I
Sbjct: 169 LLFARLALPSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAI 228
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML 332
KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P TLV FF ++ W WP PV+L
Sbjct: 229 KLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLL 288
Query: 333 QDPM-----LPAAG---YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+ P LP PS+ LMPI P P + N++ ST + EF G +
Sbjct: 289 KQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSV 348
Query: 385 TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE- 443
T ++++ +W LFEP + +KY ++ + SAS +++ +W+G V+S+ R L+ LE
Sbjct: 349 TDEILQGKAEWSKLFEPPHFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLER 408
Query: 444 -EVQGLCDPNPTEY 456
E L NP +
Sbjct: 409 NEYITLAHVNPQSF 422
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 213/391 (54%), Gaps = 17/391 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S+ ++++ S SL++ + + S + R V++ L+ I +VK+VA ++
Sbjct: 12 PISVSLPTEIEKRVSESLIEELRRQKTFESPSDTQNRFTVLESLQIITDEFVKKVAREKE 71
Query: 129 LPKEQIAETHA--TILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS-- 184
PK I +A + TYGS+ LGV G SDID L + P++ T ED+F ++L
Sbjct: 72 -PKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTR-EDYFKYFPDLLTEMA 129
Query: 185 -RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRDLDETS 242
+ +++I V DA VP+++F++ GI IDL ++ + P+ D+ + FLR LDE
Sbjct: 130 PKDSITDITAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSGFLRGLDEAE 189
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP+ F+ LR IKLWA+RR VYGN+ GF GGV A+LVA VC
Sbjct: 190 LRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVC 249
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLMPIRL 354
Q +PK + + +V FF + W WP PV+L ++ LP Y ++ LMPI
Sbjct: 250 QLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIIT 309
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVR 413
P P NITRS+ I+ E RG + +M W LF ++ Y ++
Sbjct: 310 PAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFTTGYKYYIS 369
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
V ++ ++ W G+++S+ R L+ KLE+
Sbjct: 370 VVSASKAKEPHKLWAGYIESKVRMLVQKLEQ 400
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 207/404 (51%), Gaps = 22/404 (5%)
Query: 67 NFPLNP--SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKR 122
N+ + P S + +E SL SL++ + G S KR V+ +L+++ +V
Sbjct: 5 NYGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAERFVYE 64
Query: 123 VAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNML 182
V+ Q+ + + I T+GSY LGV+G SDIDAL + P+ T DFF V +L
Sbjct: 65 VSLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTR-NDFFEVFEKIL 123
Query: 183 KSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETS 242
+ R ++ EI V DA VP+++ +GI IDL +A L V VP+++ + + LR++DE
Sbjct: 124 RERKDLEEIAAVPDAYVPIIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKD 183
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP F+ LRCIK+WA++R +Y N+ GF GGV A+LVA +C
Sbjct: 184 LRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARIC 243
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLM 350
Q +P +V FF YA W WP PV+L+ +P L YP + + M
Sbjct: 244 QLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRL----YPHDRQHRM 299
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYAR 410
P+ P P NIT ST I EF RG + + + W L + Y
Sbjct: 300 PVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTFFHNYKF 359
Query: 411 FVRVYLSASN-QDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
++ + + ++ W G V+SR R L+ KLE +G+ +P
Sbjct: 360 YLCIVAATKGPYEEHIKWSGMVESRLRILVQKLELTEGIELAHP 403
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 149/235 (63%), Gaps = 7/235 (2%)
Query: 287 GFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSET 346
GF G+HLAIL A+VC+ P S++ L A FF+T+A+WPW PV L D + SE
Sbjct: 12 GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDEL--TTCLHSEG 69
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSK 406
R LMPI +PC+P E+C S +T+ + KIR E RG+ TRD +R DF W +LFEPFPY +
Sbjct: 70 R-LMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQ 128
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHI 466
KY +F+R+ L A +LGDW GWVKSRFR LILKLE CDP P+E +D +P++
Sbjct: 129 KYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAGIECDPCPSEEVDHTDNDPNV 188
Query: 467 VFYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQG----SPGRMGLLVVQASQLSKS 517
VFYWGL P R +D +++ DF++++ N G + + + VV QL KS
Sbjct: 189 VFYWGLIPKRIIQVDTSSLKGDFMEDLTNDVYGTVKCTHSDVTISVVGLPQLPKS 243
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 195/348 (56%), Gaps = 9/348 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCLLTQKLIETLLPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
N++ ST + EF +G T +++ +W LFE + +KY
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKY 371
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 198/373 (53%), Gaps = 28/373 (7%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E ++R+ V+Q L+ + + +VK V+ ++ L + + I TYGSY LGV+G SD
Sbjct: 45 SPAETERRKQVLQLLQRVTIEFVKVVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSD 104
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
ID L LGP+ + +DFF +L+S + V +I V DA VPL++ + GI IDL
Sbjct: 105 IDTLVLGPKHVVI-DDFFAEFPPLLESMAPQGAVEKITPVPDAFVPLIKLELSGISIDLI 163
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+A L V S+P N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IKL
Sbjct: 164 FARLIVPSIPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKL 223
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ- 333
WA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 224 WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKP 283
Query: 334 -----------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
+P + Y + LMPI P P NI+ ST I E RG
Sbjct: 284 IEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGG 339
Query: 383 NTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILK 441
+ + W+ LF+ ++ Y ++ V S+ ++ W G V+S+ R L+
Sbjct: 340 DIVDKIWAKQATWNDLFKKHSFFTNDYKYYLGVTASSRTKEAESVWSGLVESKVRHLV-- 397
Query: 442 LEEVQGLCDPNPT 454
G D PT
Sbjct: 398 -----GALDRKPT 405
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 199/382 (52%), Gaps = 20/382 (5%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+Q + + +E R V++ L+E+ +V V+ ++ + + I T+G
Sbjct: 29 LIQELKRNNSFETEKETANRVEVLKLLQELAQRFVFNVSKKKNMSDGMAKDAGGKIFTFG 88
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID L + P+ + EDFF ++L+ R E+ EI V DA VP+++ K
Sbjct: 89 SYRLGVHGPGSDIDTLVVVPKHVSR-EDFFTEFDSLLRERSELDEIAPVPDAFVPVIKIK 147
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
GI IDL A L + VPE++ + + LR++DE ++L+G R IL+LVP F
Sbjct: 148 LRGISIDLLCAKLDIAQVPESLVLSDNNLLRNVDEKDLRALNGTRVTDEILELVPKPIVF 207
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IKLWA+ R VY N+ GF GGV A+LVA +CQ +P ++ FFK + W
Sbjct: 208 RIALRAIKLWAQNRAVYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILSEWK 267
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P + Y + MP+ P P NIT ST
Sbjct: 268 WPQPVVLKPIEDGPLQVRVWNPKI----YAQDRSHRMPVITPAYPSMCATHNITDSTKKV 323
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS--ASNQDDLGDWVGWV 431
I EF RG T D+ W LF + KY ++ + S AS+++ L W G V
Sbjct: 324 ILEEFSRGIQITNDIFSSKKSWSDLFNKHEFFYKYKFYLTITASTRASDEEHLK-WSGLV 382
Query: 432 KSRFRSLILKLEEVQGLCDPNP 453
+S+ R L+LKLE + G+ +P
Sbjct: 383 ESKVRLLVLKLEALSGIKIAHP 404
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 196/381 (51%), Gaps = 18/381 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
LV + +G S KR V++ L+++ +V V+ + + + + I T+G
Sbjct: 27 LVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVSKSKNMDEGMAKDAGGKIFTFG 86
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGV+G SDID L + P+ EDFF V +L+ RPE+ EI V DA VP+++ +
Sbjct: 87 SYRLGVYGPGSDIDTLVVFPKHINR-EDFFTVFEKILRQRPELEEIQSVPDAFVPIIKME 145
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI IDL A L + VP N+ + + L+++DE ++L+G R IL LVP F
Sbjct: 146 FDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLRALNGTRVTDEILLLVPQPTVF 205
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR IK+WA+RR VYGN+ GF GGV A+LVA +CQ +P +++ FF W
Sbjct: 206 KHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIISKFFVILGQWN 265
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P L YP + MP+ P P NIT ST
Sbjct: 266 WPQPVLLKPIEDGPLQVRVWNPRL----YPHDKYHKMPVITPAYPSMCATHNITESTKKV 321
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS-NQDDLGDWVGWVK 432
I EF RG ++ W LF + ++Y ++ V + + ++ + G V+
Sbjct: 322 ILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTVIAATKGSSEEQKKFAGMVE 381
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R L+ KLE + + +P
Sbjct: 382 SKLRLLVQKLENNENINLAHP 402
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 199/370 (53%), Gaps = 17/370 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + ++G S EE R V+ ++ +V +V++V+ +E A I T G
Sbjct: 31 LMEELHHQGSFESEEEGRLREQVLGRIAGLVKQFVEKVSVSFGFSEEAAKAAGAKIFTSG 90
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVHG SDID +C+ P+ + E FF V ML + V+E+ V +A VP+++
Sbjct: 91 SYRLGVHGPGSDIDTICVVPKHVSR-EHFFTVFEPMLLNMEGVTEVSGVPEAFVPVIKAI 149
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
GI +D +A L++ +P+++++ + LR+LDE +SL G R IL+LVP F
Sbjct: 150 VSGIHVDFLFARLNLTQIPDDLELKDDNLLRNLDERDVRSLGGSRVTDEILRLVPQPVVF 209
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LR +KLWA+RR +Y N+ GFLGGV A+LVA +CQ PK ++++ FF W
Sbjct: 210 RDALRAVKLWAQRRAIYSNVIGFLGGVAWAMLVARICQLFPKYDAASILSRFFHIIGQWA 269
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP P++L+ +P + YPS+ LMPI P P N+T ST
Sbjct: 270 WPQPILLKAIEDGPLNVRVWNPQI----YPSDRTHLMPIITPAYPSMCATHNVTHSTMKI 325
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
++ E RG +++ W LFE + Y ++++ +++ NQ+ W G V+S
Sbjct: 326 MQNELRRGSQIVEKIIQAGEPWANLFEKHDFFHMYRYYLQIIITSGNQEMYHKWAGTVES 385
Query: 434 RFRSLILKLE 443
+ R L+ KLE
Sbjct: 386 KIRLLVGKLE 395
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 214/392 (54%), Gaps = 19/392 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + + S +L++ + + S + +KR V++ L+EI +V++VA +R
Sbjct: 12 PISVTLPTEAENRASDALLEELRRQKTFESPSDTEKRHAVLKSLQEICNEFVRKVARERE 71
Query: 129 LPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
PK I + TYGS+ LGV+G SDID L + P++ T ED+F ++L S
Sbjct: 72 -PKNDILIKNARGKVFTYGSFRLGVYGPGSDIDTLIVAPKYVTR-EDYFNYFPDLLVSMA 129
Query: 187 ---EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETS 242
++++ VKDA VP+++F++ GI IDL ++ + + + D L + LR LDE
Sbjct: 130 PPGAITDLTVVKDAFVPIIKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLRGLDEAE 189
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP+ F+ LR IKLWA+RR VY N+ GF GGV A+LVA VC
Sbjct: 190 LRSLNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVC 249
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM----LPA-----AGYPSETRSLMPIR 353
Q +PK +++ +V FF W WP PV+L+ P+ LP Y ++ LMP+
Sbjct: 250 QLYPKATMSVIVNKFFLVIGQWRWPQPVLLK-PIDSGPLPVRVWNPKVYKGDSFHLMPVI 308
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFV 412
P P NITRS+ I+ E RG + +M W LF ++ Y ++
Sbjct: 309 TPAYPSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRYYI 368
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
V ++ +++ W G+V+S+ R L+ KLE+
Sbjct: 369 SVISASKDKEAHKIWSGYVESKVRMLVQKLEQ 400
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 207/396 (52%), Gaps = 30/396 (7%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
+L+ + ++ + EE +KR +Q L++ V +V+ V + L I I T+
Sbjct: 30 TLLDELRSQNTFEAPEETEKRGAALQTLQKAVEEFVRHVGQVKGLAPSVIDNAGGKICTF 89
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPL 201
GSY LGV+G SDID L L P+ T +DFF N+L+ + + V DA P+
Sbjct: 90 GSYRLGVYGPGSDIDTLVLAPKHVTR-DDFFAHFINVLERVAPSGAIEKFSPVPDAFTPI 148
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
++ F GI IDL +A L + SVP ++D+ + LR LDET +S++G R +L LVP
Sbjct: 149 IKMDFMGIDIDLIFARLAIASVPLDLDLKDNSLLRGLDETDLRSVNGTRVTDEVLSLVPQ 208
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTY 321
+ F+ V R +KLWA+RR +Y N+ GF GG+ A++VA +CQ +P ++ FF
Sbjct: 209 PKIFRQVTRAVKLWAQRRAIYANIVGFPGGIAWAMMVARICQLYPMACAAVVLGRFFYLM 268
Query: 322 AYWPWPTPVMLQD------------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRS 369
+ WPWP P+ML++ P + YP + R LMPI P P NIT S
Sbjct: 269 STWPWPRPIMLKEIEDGPLQVRVWNPQI----YPGDKRHLMPIITPAYPSMCATHNITHS 324
Query: 370 TFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWV 428
T I+ E LR T D++ W LF+ +++ + ++ + ++ +++ +W
Sbjct: 325 TQKVIKRELLRASQITSDILSEKRRWRDLFDRHTFFTQDFKYYLSIVAASHDKEAQDNWS 384
Query: 429 GWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEP 464
V+S+ R L+ GL + +P E DV++ +P
Sbjct: 385 SSVESKVRKLV-------GLIEQSPAE--DVELAQP 411
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 198/398 (49%), Gaps = 47/398 (11%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 24 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 84 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 142
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V+DA VP+++F+FDGI + C
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEV----RC------------------------------- 167
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 168 -RVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 226
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPHE 360
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 227 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 286
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 287 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 346
Query: 421 QDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 347 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 384
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 216/401 (53%), Gaps = 20/401 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ ++ +++ + +L++ +T E S + DKR V+ L+ I +VKRV ++
Sbjct: 14 PLSTALPTDAEKQATDALIEELTRENNFESRADTDKRTAVLASLQNITEEFVKRVCRKQN 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE- 187
LP+ I I TYGS+ LGV+G SDID L + P+ + E F + +++ P+
Sbjct: 74 LPENYINNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFEMFPDLLVEMAPKG 133
Query: 188 -VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLDETSWKS 245
+ ++ V++A VP+++F++ GI IDL +A + L+ VP + + + L LD+ +S
Sbjct: 134 AIEDLTPVQEAYVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKDDNLLTGLDDAGLRS 193
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH 305
++G R I+ LVP+ F+ LR +KLWA+RR +Y N+ GF GGV A+LVA VCQ +
Sbjct: 194 VNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLY 253
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIR 353
P+ + +T++ FF+ W WP PV+LQ +P + Y S++ LMPI
Sbjct: 254 PQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRV----YKSDSFHLMPII 309
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFV 412
P P N+T+ST I E RG N +M W LF+ ++K Y ++
Sbjct: 310 TPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTFFTKNYKYYL 369
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
V +++ ++ W G V+S+ R L+ LE + + +P
Sbjct: 370 SVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIALAHP 410
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 226/425 (53%), Gaps = 22/425 (5%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVP-----STEEEDKRRNVIQKLKEIVLA 118
P +F + ++ + R L L + + E L+P S +E +R V+ KL E+V
Sbjct: 12 PQKSFGVTSAISHAGPKPRDLELTKRL-EEALIPYGVFESEDELQQRMIVLAKLNELVKE 70
Query: 119 WVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
W+ V+ ++++P+ I T+GS+ LGVH +D L + P A DFF
Sbjct: 71 WIVEVSIKKKMPENVAKTVGGKIFTFGSFILGVHTKGAD--TLLVAPHHIDRA-DFFSSF 127
Query: 179 HNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDL 238
+++LK+ P+V E+ V++A VP+++ F I +DL +A L +P+N+D+L+ L++L
Sbjct: 128 YDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLLKNL 187
Query: 239 DETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILV 298
D +SL+G R IL+ VP++E F+ L +KLWAK+ GVY N+ GFLGGV A+LV
Sbjct: 188 DPKCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGFLGGVSWAMLV 247
Query: 299 AHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAA---GY--------PSETR 347
A CQ +P + +TL+ FF ++ W WP PV+L++ P+ G+ P +
Sbjct: 248 ARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGDRY 307
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
LMPI P P + N++ ST + EF G T D++ +W LF P + K
Sbjct: 308 HLMPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKANWDRLFTPPNFFHK 367
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEYIDVDVTEPH 465
Y ++ + S++ +++ +W+G V+S+ R LI LE E L NP Y +D
Sbjct: 368 YRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKLAHVNPKSYGPLDSEGEK 427
Query: 466 IVFYW 470
V W
Sbjct: 428 HVTRW 432
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 207/395 (52%), Gaps = 26/395 (6%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E R V++ L +V WV++ R +PK+Q+ ++ +GSY LGVH S +D
Sbjct: 48 SKQETLLRIKVLKNLDGLVKDWVQKTTISR-IPKDQMFNAGGKLIPFGSYRLGVHSSGAD 106
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID++ + P T + DFF ++L PEV+E+ V+ A VP+M K+ G+ ID+ +A
Sbjct: 107 IDSIVVAPRHITRS-DFFNSFKDILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFAR 165
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + SVPE++++L+ L++LDE S +SL+G R + +L+LVP + F LR IKLWAK
Sbjct: 166 LALKSVPEDLNILDDSLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAK 225
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
G+Y N GF GG+ AILVA +CQ +P + + L+ F ++ W WP PV+L
Sbjct: 226 NHGIYSNSMGFFGGITWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINC 285
Query: 334 -------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
DP A + LMPI P P + N++RS+ I+ E +
Sbjct: 286 DRTDLAQLNQLVWDPRRNHA----DRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKK 341
Query: 381 GHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+ +W L E + KY F+ + L A + + + G+ +SR R L+
Sbjct: 342 ALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQ 401
Query: 441 KLEEVQ--GLCDPNPTEYIDVDVTEPHIVFYWGLQ 473
LE+ Q + NP ++ DV + I F GL+
Sbjct: 402 ILEKNQVIQVAQINPRKFKDVKDPKKSIWFI-GLE 435
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 208/396 (52%), Gaps = 20/396 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
SV + +E L SL++ + + G S KR V+ L+ + +V +V+ ++ +
Sbjct: 13 SVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKVSIKKNIS 72
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ + I T+GSY LGV+G SDID L + P+ + DFF V + +LK R E+ E
Sbjct: 73 EGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSR-NDFFEVFYELLKGRSELEE 131
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I V DA VP+++ +F GI IDL +A L + VP ++ + + L+++DE ++L+G R
Sbjct: 132 IAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTR 191
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
ILQLVP F+ LRCIK+WA++R VYGN+ GF GGV A+LVA +CQ +P
Sbjct: 192 VTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVS 251
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V FF Y+ W WP PV+L+ +P L Y + + MP+ P P
Sbjct: 252 AVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRL----YALDRQHRMPVITPAYP 307
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLS 417
NIT ST I +EF RG D+ W L E + +Y ++ V +
Sbjct: 308 SMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIVAAT 367
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S + + G V+S+ R L+ KLE V+G+ +P
Sbjct: 368 RSTYAEHLKYSGMVESKLRLLVQKLELVEGIELAHP 403
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 208/396 (52%), Gaps = 20/396 (5%)
Query: 73 SVLDQMDEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
SV + +E L SL++ + + G S KR V+ L+ + +V +V+ ++ +
Sbjct: 13 SVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKVSIKKNIS 72
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ + I T+GSY LGV+G SDID L + P+ + DFF V + +LK R E+ E
Sbjct: 73 EGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSR-NDFFEVFYELLKGRSELEE 131
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
I V DA VP+++ +F GI IDL +A L + VP ++ + + L+++DE ++L+G R
Sbjct: 132 IAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTR 191
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
ILQLVP F+ LRCIK+WA++R VYGN+ GF GGV A+LVA +CQ +P
Sbjct: 192 VTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVS 251
Query: 311 NTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSP 358
+V FF Y+ W WP PV+L+ +P L Y + + MP+ P P
Sbjct: 252 AVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRL----YALDRQHRMPVITPAYP 307
Query: 359 HEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLS 417
NIT ST I +EF RG D+ W L E + +Y ++ V +
Sbjct: 308 SMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIVAAT 367
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
S + + G V+S+ R L+ KLE V+G+ +P
Sbjct: 368 RSTYAEHLKYSGMVESKLRLLVQKLELVEGIELAHP 403
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 206/388 (53%), Gaps = 18/388 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E + L++ + G S KR V+ L+++ +V V+ + + + +
Sbjct: 23 DNELNDLLIKELKLRGSFESEAATRKRVKVLNTLQKLTETFVYNVSRSKNMSEAMARDAG 82
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ T+GSY LGV+G SDIDAL + P + T EDFF +L+ RPE+ EI+ V++A
Sbjct: 83 GKLFTFGSYRLGVYGPSSDIDALVVFPRYIT-REDFFTEFEKLLRERPELEEINSVREAF 141
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +FDGI IDL +A L + +P+++ + + L+++DE ++L+G R IL L
Sbjct: 142 VPIIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKNIDEKDLRALNGTRVTDEILNL 201
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP F+ LR IK+WA++R +Y N++GF GGV A+LVA +CQ +P + +V FF
Sbjct: 202 VPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAMLVARICQLYPNAVSSYIVEKFF 261
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
+ Y+ W WP PV+L+ +P L Y + + MP+ P P NI
Sbjct: 262 QIYSQWSWPQPVLLKQIEDGPLQVRVWNPKL----YSLDRQHRMPVITPAYPSMCATHNI 317
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLG 425
T ST I EF RG ++ +W L + + +Y ++ V + S ++
Sbjct: 318 TASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDFFHRYKFYLCVVAATKSTYEEHL 377
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ G +S+ R L+ KLE V G+ +P
Sbjct: 378 KYSGMFESKLRLLVQKLEMVPGVELAHP 405
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 212/392 (54%), Gaps = 19/392 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + ++ S +L++ + + S + KR V++ L+ I +VKRVA ++
Sbjct: 12 PISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRYKVLESLQAICDEFVKRVAREKE 71
Query: 129 LPKEQ--IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS-- 184
PK I + TYGS+ LGV G SDID L + P++ T ED+F ++L++
Sbjct: 72 -PKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTR-EDYFKYFPDLLEAMA 129
Query: 185 -RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRDLDETS 242
+ ++++ V DA VP+++F++ GI IDL ++ + P+ D+ + LR LDE
Sbjct: 130 PKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGLLRGLDEAE 189
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP+ F+ LR IKLWA+RR VYGN+ GF GGV A+LVA VC
Sbjct: 190 LRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVC 249
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM----LPA-----AGYPSETRSLMPIR 353
Q +PK + + +V FF + W WP PV+L+ P+ LP Y ++ LMP+
Sbjct: 250 QLYPKAATSVIVNKFFLVISQWRWPQPVLLK-PIESGPLPVRVWNPKIYKGDSFHLMPVI 308
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFV 412
P P NI+RS+ I E RG + +M W LF ++ Y ++
Sbjct: 309 TPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFFTSDYKYYI 368
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
V ++ +++ W G+V+S+ R L+ KLE+
Sbjct: 369 SVISASKSKEAHNVWSGYVESKVRMLVQKLEQ 400
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 213/409 (52%), Gaps = 29/409 (7%)
Query: 68 FPLNPSVLDQMDEERSL----SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
F + P + Q+ E L +L++ + + S E KR V+ ++ I A+V+RV
Sbjct: 7 FGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVRRV 66
Query: 124 AWQRRLPKEQIAETHAT--ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
A ++ PK ++ +A + TYGSY LGV+G SDID L + P + T ED+F ++
Sbjct: 67 AEEKE-PKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTR-EDYFKYFPDL 124
Query: 182 LKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRD 237
L S + ++++ V DA VP+++F++ GI IDL ++ + P+ D+ + LR
Sbjct: 125 LVSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRG 184
Query: 238 LDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAIL 297
LDE +SL+G R IL LVP+ F+ LR IKLWA+RR VY N+ GF GGV A+L
Sbjct: 185 LDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAML 244
Query: 298 VAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSE 345
VA VCQ +PK + +V FF + W WP PV+L+ +P L Y +
Sbjct: 245 VARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKL----YKGD 300
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-Y 404
T LMP+ P P NITRS+ I E R + +M W LF +
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFF 360
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ Y ++ V +A ++ W G+V+S+ R L+ KLE+ Q + +P
Sbjct: 361 TAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIALAHP 409
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 199/392 (50%), Gaps = 27/392 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D++ + SL+Q + + S +E R V+ ++ +V +V VA
Sbjct: 11 PISTAESSAEDQKLTESLMQELRAQSTFESDQESRTREIVLGRISALVKKFVTTVAKAHG 70
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L I T+GSY LGVHG SDID LC+ P+ E FF V ML+ P +
Sbjct: 71 LSDATANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVNRDE-FFSVFEPMLREEPNI 129
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
+E+ V DA VP+++ K GI +DL A + + S+P+++ + N LR+LDE KSL
Sbjct: 130 TEVSGVPDAFVPIIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLDERCIKSLG 189
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL L+P+ + F+ LRCIKLWA+RR +Y N++GFLGGV A+LVA +CQ +P
Sbjct: 190 GSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVARICQLYPN 249
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLP 355
T+V FF W WP PV+L+ +P + YPS+ MPI P
Sbjct: 250 AVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQV----YPSDRAHRMPIITP 305
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY 415
P N++ ST + EF RG + + + + W LF + + ++++
Sbjct: 306 SYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFFTDFRHYLQIV 365
Query: 416 LSASNQDDLGDWVGWVKSRFRSLILKLEEVQG 447
SA +Q W L+L+L+ +G
Sbjct: 366 ASADDQHSHDKW---------QLVLRLDAQEG 388
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 207/393 (52%), Gaps = 18/393 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D + S L+ + + E KR V+ KL+ ++ V++V +
Sbjct: 13 PLSTDSPTERDLKLSADLMTELKAQNNFEPPEATQKREEVLVKLEGLLKELVRKVGKSKG 72
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK-SRP- 186
LP+E + + I TYGSY L V G SDIDAL + P T EDFF + +M++ S P
Sbjct: 73 LPEEILQQAGGKIFTYGSYRLKVFGPGSDIDALMIAPRHVTR-EDFFKYMPDMIRQSTPT 131
Query: 187 -EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKS 245
+++E+ V+ A VP+++ + DG+ +DL ++ LH+ SVP+++ + + LR L ET +
Sbjct: 132 EQLTELVPVEAANVPIIKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNLLRGLSETDLRC 191
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH 305
++G R +LQLVP+ + F+ LR IKLWA RRGVYGN++GF GGV A++V +CQ +
Sbjct: 192 VNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGVGYAMMVVRMCQLY 251
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVML--QDPMLPAAGY--------PSETRSLMPIRLP 355
P+ + +V FF W WP PV L ++P P G+ P E MPI P
Sbjct: 252 PRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPA-PDLGHYVAQWPENPWEKADKMPIITP 310
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF--EPFPYSKKYARFVR 413
P +T S I EF R T D+ +W LF + F +++ Y ++
Sbjct: 311 VFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQTF-FTEDYKHYLC 369
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ 446
+ + ++ W G+V SR R L+ +E Q
Sbjct: 370 LVTGSRTKEAQQAWSGFVSSRLRKLVSSIESPQ 402
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 210/394 (53%), Gaps = 21/394 (5%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDK----RRNVIQKLKEIVLAWVKRVA 124
P++ S+ + ++ S SL++ + + S + K R V++ L++I +V++VA
Sbjct: 12 PISVSLPTENEKRISESLIEELRRQKTFESPSDTQKSLSNRHTVLESLQKITDEFVRKVA 71
Query: 125 WQRRLPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNML 182
++ PK I + TYGS+ LGV G SDID L + P++ T ED+F +L
Sbjct: 72 REKE-PKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTR-EDYFKYFPELL 129
Query: 183 KS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRDL 238
+ ++++ V DA VP+++F++ GI IDL ++ + P+ D+ + LR L
Sbjct: 130 AEMAPKDSITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGL 189
Query: 239 DETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILV 298
DE +SL+G R IL LVP+ F+ LR IKLWA+RR VYGN+ GF GGV A+LV
Sbjct: 190 DEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLV 249
Query: 299 AHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLM 350
A VCQ +PK + + +V FF + W WP PV+L ++ LP Y ++ LM
Sbjct: 250 ARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLM 309
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYA 409
PI P P NITRS+ I+ E RG T +M W+ LF ++ Y
Sbjct: 310 PIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFFTTGYK 369
Query: 410 RFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++ V ++ +D W G+++S+ R L+ KLE
Sbjct: 370 YYISVVSASKARDAHKLWSGYIESKVRMLVQKLE 403
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 197/378 (52%), Gaps = 10/378 (2%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
++++ + N+ S E KRR V+ L+++ +V V+ ++ + + + I T+
Sbjct: 989 AMIEELRNQNSFESESETQKRREVLATLQKLTEEFVYTVSRRKNMSEGMARDAGGKIFTF 1048
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV+G SDID L + P+ T +DFF V +L+ RPE+++I V DA +P+++
Sbjct: 1049 GSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFTVFEELLRKRPELNKIQPVPDAFMPIIKT 1107
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
FDG+ IDL L + V ++ + + LR++D+ ++L+G R ILQLVP
Sbjct: 1108 VFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNIDDRDLRALNGTRVTDQILQLVPQKMV 1167
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F+ LR IKLWA+RR +Y N+ GF GGV A+LVA +CQ +P +V+ FF+ Y W
Sbjct: 1168 FRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLVARICQLYPNAVGAVIVSKFFQIYLQW 1227
Query: 325 PWPTPVML---QDPMLPA-----AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
WP PV+L +D LP Y + MP+ P P NIT ST I
Sbjct: 1228 KWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVITPAYPSMCATHNITASTQKIILK 1287
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG-DWVGWVKSRF 435
E RG D+ W LF + Y ++ V + + + W G V+S+
Sbjct: 1288 EMQRGLEIMNDIQFGKRTWKDLFAKHDFFFAYKFYLTVITATRDSYEAHLKWSGMVESKL 1347
Query: 436 RSLILKLEEVQGLCDPNP 453
R L+ KLE V G+ +P
Sbjct: 1348 RLLVQKLEVVNGIVLAHP 1365
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 198/403 (49%), Gaps = 40/403 (9%)
Query: 62 LVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVK 121
L P PL+ + D + L + + GL S E R +V++ L E+ +V+
Sbjct: 10 LYPGITRPLSLEGPTEYDIHLTKELQKTLMLYGLYDSEETAKLREHVLKSLDEMTKKFVQ 69
Query: 122 RVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
V ++ KEQ + I TYGSY LGV+ S+
Sbjct: 70 FVYERQGFSKEQAVKAGGKIFTYGSYRLGVNAKASN------------------------ 105
Query: 182 LKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDET 241
++ +I V DA VP+++FK+ GI ID A L++ + E++D+ +P LR LD
Sbjct: 106 ----EQIKDITPVTDAFVPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEILRGLDAH 161
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
S +S++G R IL LVP+++ F+ LRCIKLWA R+ VY N+ GFLGGV AILVA V
Sbjct: 162 SIRSINGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAWAILVARV 221
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ-----------DPMLPAAGYPSETRSLM 350
CQ +P S +TL++ FF W WP+PVML+ P P P++ M
Sbjct: 222 CQLYPHASASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLN-PTDRSHRM 280
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYAR 410
P+ P P N+T+ST I E + +M W LFE + K Y +
Sbjct: 281 PVITPSYPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAHSFFKMYRQ 340
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
++++ + A N + W G V++R R L++KLE + + +P
Sbjct: 341 YLQITVVADNYELQLKWTGLVEARLRQLVIKLEAIHSVMQVHP 383
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 213/409 (52%), Gaps = 29/409 (7%)
Query: 68 FPLNPSVLDQMDEERSL----SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
F + P + Q+ E L +L++ + + S E KR V+ ++ I A+V+RV
Sbjct: 7 FGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVRRV 66
Query: 124 AWQRRLPKEQIAETHAT--ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
A ++ PK ++ +A + TYGSY LGV+G SDID L + P + T ED+F ++
Sbjct: 67 AEEKE-PKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTR-EDYFKYFPDL 124
Query: 182 LKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRD 237
L S + ++++ V DA VP+++F++ GI IDL ++ + P+ D+ + LR
Sbjct: 125 LVSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRG 184
Query: 238 LDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAIL 297
LDE +SL+G R IL LVP+ F+ LR IKLWA+RR VY N+ GF GGV A+L
Sbjct: 185 LDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAML 244
Query: 298 VAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSE 345
VA VCQ +PK + +V FF + W WP PV+L+ +P L Y +
Sbjct: 245 VARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKL----YKGD 300
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-Y 404
T LMP+ P P NITRS+ I E R + +M W LF +
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFF 360
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ Y ++ V +A ++ W G+V+S+ R L+ KLE+ Q + +P
Sbjct: 361 TAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIALAHP 409
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 204/403 (50%), Gaps = 28/403 (6%)
Query: 64 PSFNFPLNPSVLDQMDEERSLS----LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAW 119
P + + P++ M ++ + L++ + S EE KR +V+++L+ I +
Sbjct: 686 PPRQWGVTPAISHSMPTDQEIKVNNDLIEELKAMNSFESAEESQKRVDVLKRLQRITEDF 745
Query: 120 VKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLH 179
VK+V + + + TYGSY LGV G SDID L + P+ T EDFF
Sbjct: 746 VKQVYTSKNQNELATNSAGGKVFTYGSYRLGVVGPGSDIDTLVVAPKLVTR-EDFFKFYP 804
Query: 180 NMLKS-----RPEV-SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPF 233
+LK+ P++ E+ V DA VP+++F GI IDL + L V VP ++ + +
Sbjct: 805 PLLKALNKPNEPQIIEELAPVPDAFVPIIKFVMSGISIDLIFCRLGVTQVPADMSLEDKN 864
Query: 234 FLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVH 293
LR LDE +SL+G R IL LVP F+ LR IK+WAK + +YGN++GF GGV
Sbjct: 865 LLRGLDEKELRSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGVA 924
Query: 294 LAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAG 341
A+LVA +CQ +P +V+ FF+ W WP PV+L+ +P L
Sbjct: 925 WAMLVARICQLYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRL---- 980
Query: 342 YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEP 401
YPS+ LMPI P P NIT ST I E + + ++ +W LFE
Sbjct: 981 YPSDKNHLMPIITPAYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFER 1040
Query: 402 FP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++K Y ++ V SA Q+ W G V+S+ R L++KLE
Sbjct: 1041 HTFFTKDYKYYLAVNASAKEQEASVKWSGLVESKIRHLVMKLE 1083
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 212/392 (54%), Gaps = 19/392 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + ++ S +L++ + + S + KR V++ L+ I +VKRVA ++
Sbjct: 12 PISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRFKVLESLQAICDEFVKRVAREKE 71
Query: 129 LPKEQ--IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS-- 184
PK I + TYGS+ LGV G SDID L + P++ T +D+F ++L++
Sbjct: 72 -PKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTR-DDYFKYFPDLLEAMA 129
Query: 185 -RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVLNPFFLRDLDETS 242
+ ++++ V DA VP+++F++ GI IDL ++ + P+ D+ + LR LDE
Sbjct: 130 PKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGLDEAE 189
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP+ F+ LR IKLWA+RR VYGN+ GF GGV A+LVA VC
Sbjct: 190 LRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVC 249
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM----LPA-----AGYPSETRSLMPIR 353
Q +PK + + +V FF + W WP PV+L+ P+ LP Y ++ LMP+
Sbjct: 250 QLYPKAATSVIVNKFFLVISQWRWPQPVLLK-PIESGPLPVRVWNPKIYKGDSFHLMPVI 308
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFV 412
P P NI+RS+ I E RG + +M W LF ++ Y ++
Sbjct: 309 TPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFFTSDYKYYI 368
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
V ++ +++ W G+V+S+ R L+ KLE+
Sbjct: 369 SVISASKSKEAHNVWSGYVESKVRMLVQKLEQ 400
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E + R+N +Q ++ + + +VK V+ ++ L + I TYGSY LGV+G SD
Sbjct: 43 SPAETEHRKNTLQLIQRVTVEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
ID L +GP+ + +DFF VL M + V ++ V DA VP+++ +F GI IDL
Sbjct: 103 IDTLIVGPKHVVI-DDFFSDFPPVLERM-APQGAVEKMTPVPDAFVPIIKLEFSGISIDL 160
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
YA L V SVP N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IK
Sbjct: 161 IYARLIVPSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIK 220
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
LWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 221 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 280
Query: 334 ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG 381
+P + Y + LMPI P P N++ ST I E RG
Sbjct: 281 PIEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKTVILRELQRG 336
Query: 382 HNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+ + W+ LF +++ Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 337 GDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVG 396
Query: 441 KLEEVQGLCDPNP 453
L+ + +P
Sbjct: 397 ALDRKSTIAVAHP 409
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E + R+N +Q ++ + + +VK V+ ++ L + I TYGSY LGV+G SD
Sbjct: 43 SPAETEHRKNTLQLIQRVTVEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
ID L +GP+ + +DFF VL M + V ++ V DA VP+++ +F GI IDL
Sbjct: 103 IDTLIVGPKHVVI-DDFFSDFPPVLERM-APQGAVEKMTPVPDAFVPIIKLEFSGISIDL 160
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
YA L V SVP N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IK
Sbjct: 161 IYARLIVPSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIK 220
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
LWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 221 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 280
Query: 334 ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG 381
+P + Y + LMPI P P N++ ST I E RG
Sbjct: 281 PIEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKTVILRELQRG 336
Query: 382 HNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+ + W+ LF +++ Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 337 GDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVG 396
Query: 441 KLEEVQGLCDPNP 453
L+ + +P
Sbjct: 397 ALDRKSTIAVAHP 409
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 197/378 (52%), Gaps = 18/378 (4%)
Query: 89 LMTN-EGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSY 147
LMT +G S EE R V+ ++ ++V ++ + +R L + I T+GSY
Sbjct: 32 LMTELKGTFESAEEGRTREAVLGRVTKLVKEFIYQACIRRNLSEAAAKAAGGKIYTFGSY 91
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFD 207
LGVHG SDID L + P+ +DF + ++L+ V E + V DA VP++ K
Sbjct: 92 RLGVHGPGSDIDTLVVAPKHVDR-QDFMEIFLDLLQKDDWVEEANPVPDAYVPVIDAKIK 150
Query: 208 GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQP 267
GI +D +A L + +P+++++ + L++LD+ +SL+G R+ IL+LVP++ F+
Sbjct: 151 GISMDFTFARLALSVIPDDLELGDDSLLKNLDDKCVRSLNGSRSTDAILRLVPNVHVFRD 210
Query: 268 VLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWP 327
LR IK WA+RR +Y N+ GFLGG+ A+LVA VCQ +P G+ T+V FF + W WP
Sbjct: 211 ALRAIKYWAQRRAIYSNVSGFLGGIAWALLVARVCQLYPNGNAATIVRRFFLIMSMWKWP 270
Query: 328 TPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIR 375
PV+L+ +P + YPS+ MPI P P N+ TF I+
Sbjct: 271 QPVVLKKIEEGNLNMRVWNPKI----YPSDRAHKMPIITPAYPSMCSTHNVMNCTFEIIQ 326
Query: 376 TEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRF 435
E RG + + W LF + +Y ++++ S +++ W V+S+
Sbjct: 327 EELKRGQELIVRITNGEAKWADLFTKHTFFSQYQYYLQIIASCDDEEIQKKWSKTVESKG 386
Query: 436 RSLILKLEEVQGLCDPNP 453
R L+ KLEE L +P
Sbjct: 387 RQLVGKLEESGTLARVHP 404
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 203/392 (51%), Gaps = 27/392 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ +Q ++ + + +VK V+ ++ L + I I TYGSY LGV+G SDID
Sbjct: 46 ETERRKQTLQLIQRVTVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
L +GP+ + EDFF +L NM + + ++ V DA VP+++ + GI IDL YA
Sbjct: 106 LVVGPKHVSF-EDFFSDFPPILENM-APKGAIEKLTSVPDAYVPIIKIELSGISIDLIYA 163
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA
Sbjct: 164 RLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWA 223
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--- 333
+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 224 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIE 283
Query: 334 ---------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+P + Y + LMPI P P N++ ST + E RG +
Sbjct: 284 EGPLQMKVWNPQI----YHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDI 339
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W+ LF +S+ Y ++ + ++ ++D W G V+S+ R L+ L+
Sbjct: 340 ADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALD 399
Query: 444 EVQG--LCDPNPT--EYIDVDVTEPHIVFYWG 471
+ P P E I V E IV G
Sbjct: 400 RKSSIEIAHPFPKGFERIHVCKDEKEIVEVMG 431
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 205/385 (53%), Gaps = 21/385 (5%)
Query: 79 DEERSL--SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQI-- 134
+EE+ L +L Q + +G S E +KR+ V+++L++I +V+R A ++ PK I
Sbjct: 19 EEEKRLNNALHQELRAQGTFESPAETEKRKEVLRQLEKITNVFVQRAAAEKE-PKNTILI 77
Query: 135 AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP--EVSEIH 192
+ + TYGSY LGV+G SD+D L + P++ T+ + F + +++ P ++++
Sbjct: 78 RDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFRIFPEVLVEMAPPGAITDLT 137
Query: 193 CVKDAKVPLMRFKFDGILIDLPYACLHVLS---VPENVDVLNPFFLRDLDETSWKSLSGV 249
V +A VP+++F+F GI IDL + + L +N + + LR L E +SL+G
Sbjct: 138 PVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLRGLSENEVRSLNGT 197
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
R IL LVP+ F+ LR IKLWA+R+ +Y N+ G+ GGV A+LVA VCQ +PK +
Sbjct: 198 RVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQLYPKAT 257
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQD-----PMLPAAG-----YPSETRSLMPIRLPCSPH 359
+V FF WPWP PV+L+D P+ A Y S+ MPI P P
Sbjct: 258 SAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRNHRMPIITPSYPS 317
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N+ RS+ I+ E +G T D+MR W LF + R+ +S+S
Sbjct: 318 MCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDLFTKHTFFTSGFRYYLTVISSS 377
Query: 420 NQDDLGD-WVGWVKSRFRSLILKLE 443
+ W G+V+SR R L+ KLE
Sbjct: 378 RTKKAQNVWSGFVESRVRLLVNKLE 402
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 193/360 (53%), Gaps = 23/360 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ +Q ++ + + +VK V+ ++ L + I I TYGSY LGV+G SDID
Sbjct: 46 ETERRKQTLQLIQRVTVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
L +GP+ + EDFF +L NM + + ++ V DA VP+++ + GI IDL YA
Sbjct: 106 LVVGPKHVSF-EDFFSDFPPILENM-APKGAIEKLTSVPDAYVPIIKIELSGISIDLIYA 163
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA
Sbjct: 164 RLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWA 223
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--- 333
+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 224 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIE 283
Query: 334 ---------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+P + Y + LMPI P P N++ ST + E RG +
Sbjct: 284 EGPLQMKVWNPQI----YHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDI 339
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W+ LF +S+ Y ++ + ++ ++D W G V+S+ R L+ L+
Sbjct: 340 ADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALD 399
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 192/348 (55%), Gaps = 9/348 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D + L++ + G+ +E R ++ KL +V W++ ++ +
Sbjct: 22 PISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNLVKEWIREISELKN 81
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF + LK + EV
Sbjct: 82 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEKLKQQEEV 140
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 201 CRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
N++ ST + EF +G T +++ +W LF+ + +KY
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 207/396 (52%), Gaps = 21/396 (5%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + +D E++ L++ + E +E KR + + L + +V+ V+ ++R
Sbjct: 17 PISTALPEPLDNEKTAELIEELKRENNYEPMDETKKRMSTLALLNRVTQEFVREVSRRQR 76
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF----VVLHNMLKS 184
LP QI + I YGSY LGV G SDID L + P T EDFF VL M
Sbjct: 77 LPPSQIDQFGGKIYPYGSYRLGVFGPGSDIDTLAVAPRHVTR-EDFFEYFPAVLERM-AG 134
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPENVDVLNPFFLRDLDETSW 243
V+ + V D+ VP+++ +GI IDL +A + L ++P+++ + + L LD+ +
Sbjct: 135 PGAVTSLTAVPDSFVPIIKLVLNGIEIDLIFASIASLQTIPKDLTLNDNNLLMGLDQPTV 194
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
++++G R IL LVP+ + F+ LR IKLWA+RR +Y N+ G+ GGV A+LVA VCQ
Sbjct: 195 RAVTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGVAWAMLVARVCQ 254
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQD-------------PMLPAAGYPSETRSLM 350
+P T+V FF ++W WPTPVML+D + A YP + +++M
Sbjct: 255 LYPHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYPGDRKNIM 314
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYA 409
PI P P NI++S I E RG T + W LF+ ++ +
Sbjct: 315 PIITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLFKKHTFFTADHK 374
Query: 410 RFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
++ + S+ N D W G V+S+ R +++LE +
Sbjct: 375 YYLSITASSLNADSAKAWAGLVESKVRIFVMQLEGI 410
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 193/360 (53%), Gaps = 23/360 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ +Q ++ + + +VK V+ ++ L + I I TYGSY LGV+G SDID
Sbjct: 46 ETERRKQTLQLIQRVTVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
L +GP+ + EDFF +L NM + + ++ V DA VP+++ + GI IDL YA
Sbjct: 106 LVVGPKHVSF-EDFFSDFPPILENM-APKGAIEKLTSVPDAYVPIIKIELSGISIDLIYA 163
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA
Sbjct: 164 RLLVHSVPPNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWA 223
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--- 333
+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 224 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAVVGKFFRIMNQWKWPQPVLLKPIE 283
Query: 334 ---------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+P + Y + LMPI P P N++ ST + E RG +
Sbjct: 284 EGPLQMKVWNPQI----YHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDI 339
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W+ LF +S+ Y ++ + ++ ++D W G V+S+ R L+ L+
Sbjct: 340 ADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALD 399
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 192/366 (52%), Gaps = 12/366 (3%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDID 159
EE KR V++ L+ I +V++V + + + I T+GS+ LGV G SDID
Sbjct: 45 EETAKRSAVLKSLQAITEEFVRQVTRAQGSAESAVKSAGGKIETFGSFKLGVIGPGSDID 104
Query: 160 ALCLGPEFATMAEDFFVVLHNMLKSRP--EVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
L + P+ T AE F M KS P ++E+ DA VP++ FKF G+ IDL +
Sbjct: 105 TLVVVPKNITKAEFFQFFPEIMEKSTPPGTITELMSKPDAYVPILTFKFSGVDIDLLFGR 164
Query: 218 LHVLS-VPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
+ L+ +P+++ + + LR L+E +SL+GVR +L LVP + F+ LR IKLW+
Sbjct: 165 IASLNQIPKDLKMTDHDLLRGLEEQEARSLNGVRVADEMLTLVPQTKVFRTALRTIKLWS 224
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM 336
RRG+ GN++GF GGV AILVA VCQ +PK + +T+V FFK W WP PV+L++
Sbjct: 225 ARRGIVGNIYGFPGGVAWAILVARVCQLYPKATGSTIVMKFFKIIDKWQWPQPVLLKNIE 284
Query: 337 LPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL 388
++ R +MPI P P N+TRST I E RG +
Sbjct: 285 TGTLNLQVWNPQINHTDRRHIMPIITPAYPSMCTTHNVTRSTMAVIHKELKRGGEIADRV 344
Query: 389 MRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG 447
M W LFE ++ Y ++ + ++++ + W G+V+S+ R L+ KL E
Sbjct: 345 MMGKAKWKDLFEKHTFFTSSYKYYLCIITASTSSEAQTKWAGFVESKVRLLVGKLTEQTS 404
Query: 448 LCDPNP 453
+ P
Sbjct: 405 IAIAQP 410
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 202/381 (53%), Gaps = 23/381 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ +Q ++ +V+ +VK V ++ L + I TYGSY LGV+G SDID
Sbjct: 46 ETERRQQTLQLIQRVVIEFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFVVLHNMLK--SRP-EVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
L + P+ M +DFF +L+ S P + ++ V DA VP+++ +F GI IDL +A
Sbjct: 106 LIVAPKH-VMIDDFFSDFPPILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISIDLIFAR 164
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + SVP N+D+ N +LR LD+ +SL+G R IL+LVP + F+ LR IKLWA+
Sbjct: 165 LILPSVPLNLDLKNNDYLRGLDDKEVRSLNGTRVTDQILELVPQQKTFRIALRAIKLWAQ 224
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 225 RRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIED 284
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
+P + Y + LMPI P P NI+ ST I E RG +
Sbjct: 285 GPLQIKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDMV 340
Query: 386 RDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
+ W+ LF +SK Y ++++ S+ ++ W G V+S+ R L+ L+
Sbjct: 341 DKIFAKQLTWNDLFTRHTFFSKDYKYYLQITASSKTKEAESVWSGLVESKLRHLVGALDR 400
Query: 445 --VQGLCDPNPTEYIDVDVTE 463
+ + P P + + V +
Sbjct: 401 KNIIAIAHPFPKGFERIHVVK 421
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 200/384 (52%), Gaps = 21/384 (5%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+ + + S E ++R+ V+Q L+ + L +VK V+ ++ L + I TYG
Sbjct: 31 LISELKTQNNFESPAETERRKQVLQLLQRVALEFVKVVSRKKGLSPAAVEAAGGKIFTYG 90
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP---EVSEIHCVKDAKVPLM 202
SY LGV+G SDID L +GP+ + +DFF +L+ + ++ V DA VP++
Sbjct: 91 SYRLGVYGPGSDIDTLVVGPKH-VLIDDFFSDFPPVLEKMAPPGAIEKMTPVPDAFVPII 149
Query: 203 RFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDL 262
+ + GI IDL +A L V SVP N+D+ N +LR LDE +SL+G R IL+LVP
Sbjct: 150 KMELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQQ 209
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA 322
+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+
Sbjct: 210 KTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMN 269
Query: 323 YWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
W WP PV+L+ +P + Y + LMPI P P N++ ST
Sbjct: 270 KWAWPQPVLLKPIEDGPLQIKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMST 325
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVG 429
I E RG + + W+ LF +++ Y ++ + S+ ++ W G
Sbjct: 326 KAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFFTQDYKYYLSITASSKTKEAESVWSG 385
Query: 430 WVKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R L+ L+ + +P
Sbjct: 386 LVESKIRHLVGALDRKNTIAVAHP 409
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 191/356 (53%), Gaps = 15/356 (4%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ V+Q L+ + + +V+ V+ ++ L + + I TYGSY LGV+G SDID
Sbjct: 46 ETERRKQVLQLLQRVTVEFVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
L +GP+ + +DFF VL M S + ++ V DA VP+++ + GI IDL +A
Sbjct: 106 LVVGPKHV-LIDDFFAEFPPVLERM-ASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFA 163
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L + S+P N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IKLWA
Sbjct: 164 RLVIPSIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWA 223
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVM----- 331
+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+
Sbjct: 224 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIE 283
Query: 332 ---LQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL 388
LQ + Y + LMPI P P NI+ ST I E RG + +
Sbjct: 284 DGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDMVDKI 343
Query: 389 MRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
WH LF ++ Y ++ + S+ ++ W G V+S+ R L+ L+
Sbjct: 344 FMKQLSWHDLFARHTFFTHDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALD 399
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 200/375 (53%), Gaps = 15/375 (4%)
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATIL 142
S SL++ + + S +E KR +V+ +L++++ V+ V Q++LP E + E+ I
Sbjct: 28 SESLMEELKAQNNFESPDETKKRGDVLARLQKLLHQLVQIVGKQKKLPNEILKESGGKIF 87
Query: 143 TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP---EVSEIHCVKDAKV 199
TYGSY LGV+G SDID L + P T EDFF + +L+ E++E+ V V
Sbjct: 88 TYGSYRLGVYGPGSDIDTLMVAPRHVTR-EDFFEHMPTLLRQATTPDELTELTPVPGITV 146
Query: 200 PLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLV 259
P+++ + G+ IDL ++ L SVP+N+++ + LR L E + ++G R ILQLV
Sbjct: 147 PIIKLELCGVSIDLIFSALDRASVPKNLELTDNNLLRGLTEVDLRCVNGTRVTDRILQLV 206
Query: 260 PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFK 319
P F+ LR +KLWA+RR +YGN+ GF GGV A++VA +CQ +P+ + +V FF
Sbjct: 207 PQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGVAYAMMVARICQLYPRAAAPMIVQKFFF 266
Query: 320 TYAYWPWPTPVMLQD----PMLPAAGYPSETR----SLMPIRLPCSPHEYCHSNITRSTF 371
+ W WP + LQ P+ P+ R LMP+ P P +I ST
Sbjct: 267 VISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVITPAYPCMNSTMSIMPSTK 326
Query: 372 YKIRTEFLRGHNTTRDLMRPDFDWHFLF--EPFPYSKKYARFVRVYLSASNQDDLGDWVG 429
+ TE RGH+ ++ W LF + F +S+ Y ++ V + ++ W G
Sbjct: 327 AVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKF-FSEAYQHYICVITAGKTKEAQQAWSG 385
Query: 430 WVKSRFRSLILKLEE 444
V+SR R LI +E+
Sbjct: 386 LVQSRLRRLIQGIEQ 400
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 196/372 (52%), Gaps = 21/372 (5%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E ++R+ V+Q ++ + + +VK V+ ++ L + + I TYGSY LGV+G SD
Sbjct: 43 SPAETERRKQVLQLIQRVTVEFVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPE---VSEIHCVKDAKVPLMRFKFDGILIDLP 214
ID L +GP+ + +DFF +L+ + ++ V DA VP+++ + GI IDL
Sbjct: 103 IDTLVVGPKHVII-DDFFSDFPPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLI 161
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+A L + S+P N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IKL
Sbjct: 162 FARLIIPSIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKL 221
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ- 333
WA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 222 WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKP 281
Query: 334 -----------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
+P + Y + LMPI P P N++ ST I E RG
Sbjct: 282 IEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGG 337
Query: 383 NTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILK 441
+ + W LF ++K Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 338 DIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGA 397
Query: 442 LEEVQGLCDPNP 453
L+ + +P
Sbjct: 398 LDRKATIAIAHP 409
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 198/374 (52%), Gaps = 30/374 (8%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E ++R+ V++ L+ + + +VK V+ ++ L + + I TYGSY LGV+G SD
Sbjct: 43 SPAETEQRKEVLKLLQRVTIEFVKVVSRKKGLSEAAVEAAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
ID L +GP+ + +DFF VL M + ++ V DA VP+++ + GI IDL
Sbjct: 103 IDTLVVGPK-QVLIDDFFSDFPPVLERMAPPG-AIEKMTPVPDAYVPIIKLELSGISIDL 160
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
+A L + S+P N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IK
Sbjct: 161 IFARLIIPSIPINLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIK 220
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
LWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 221 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 280
Query: 334 ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG 381
+P + Y + LMPI P P N++ ST I E RG
Sbjct: 281 PIEDGPLQIKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKNVILRELQRG 336
Query: 382 HNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+ + W+ LF ++K Y ++R+ +++ ++ W G V+S+ R L+
Sbjct: 337 GDMVDKIFMKQLTWNDLFARHSFFTKDYKYYLRITAASTTKEADSVWSGLVESKIRHLV- 395
Query: 441 KLEEVQGLCDPNPT 454
G D PT
Sbjct: 396 ------GALDRKPT 403
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 196/372 (52%), Gaps = 21/372 (5%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E ++R+ V+Q ++ + + +VK V+ ++ L + + I TYGSY LGV+G SD
Sbjct: 43 SPAETERRKQVLQLIQRVTVEFVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPE---VSEIHCVKDAKVPLMRFKFDGILIDLP 214
ID L +GP+ + +DFF +L+ + ++ V DA VP+++ + GI IDL
Sbjct: 103 IDTLVVGPKHVII-DDFFSDFPPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLI 161
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+A L + S+P N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IKL
Sbjct: 162 FARLIIPSIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKL 221
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ- 333
WA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 222 WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKP 281
Query: 334 -----------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
+P + Y + LMPI P P N++ ST I E RG
Sbjct: 282 IEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGG 337
Query: 383 NTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILK 441
+ + W LF ++K Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 338 DIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGA 397
Query: 442 LEEVQGLCDPNP 453
L+ + +P
Sbjct: 398 LDRKATIAIAHP 409
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 199/388 (51%), Gaps = 21/388 (5%)
Query: 76 DQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+ D S L + + GL + E +R+ V+ L ++V W ++A + L KE+++
Sbjct: 21 ESKDLAASQELEKFLKAMGLYENAEGSKRRKAVLLMLLKLVKEWSGKIAAEEGLDKEEVS 80
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
AT+ T+GSY LGVH ++DID LCL P + E FF +L++ E+ E+ V
Sbjct: 81 P--ATLKTFGSYHLGVHTPDADIDVLCLAPRHCSR-ESFFTSFCQILRNHTEIDELFPVP 137
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A P+++FK G+ ID+ + LH +P +V LR LD+ +SL+GVR + I
Sbjct: 138 EAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDDAGVRSLNGVRVAELI 197
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L LVP+ + F+ LR +K WA+RRG+Y N+ G LGGV+ AILVA V Q +P S + L+
Sbjct: 198 LSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLT 257
Query: 316 NFFKTYAYWPWPTPVMLQD------------------PMLPAAGYPSETRSLMPIRLPCS 357
FF Y W WP V L + + P + LMPI P
Sbjct: 258 KFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPIITPAY 317
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS 417
P N+ IR E RG T+ + +W LFE + ++ +V+V +S
Sbjct: 318 PAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWANLFERSDFFWRFELYVQVDIS 377
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLEEV 445
A + D W GW++SR RS ++ L+++
Sbjct: 378 ARSAADHRLWFGWIESRMRSFLVCLDQI 405
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 184/382 (48%), Gaps = 51/382 (13%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
++D + L M G+ EE + R V+ KL V W+ ++ + LP I+
Sbjct: 31 EIDHHYTKKLCDAMKPFGVFEDEEELNHRLAVLGKLNNFVKEWIAEISELKNLPPSAISC 90
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
I T+GSY LGVH +DIDALC+ P DFF LK E+ ++ V+D
Sbjct: 91 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQSFFEKLKQHEEIKDLRAVED 149
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++FKFDGI IDL +A L + S+P+N+D+ LR+LD +SL+G R IL
Sbjct: 150 AFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILRNLDIRCIRSLNGCRVTDEIL 209
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP+ E F+ LR IKLWAKRRG+Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 210 YLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHK 269
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
FF ++ W WP PV+L+ P
Sbjct: 270 FFLVFSKWEWPNPVLLKQP----------------------------------------- 288
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFR 436
+L P +D P Y ++ + SAS +++ +W+G V+S+ R
Sbjct: 289 -------EDSNLNLPVWDPRVSITPVFYLLMVLHYIVLTASASTEENHLEWIGLVESKIR 341
Query: 437 SLILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 342 VLVGNLERNEYITLAHVNPQSF 363
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 200/381 (52%), Gaps = 18/381 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G S KR V+ L+++ +V +V+ ++ + + + I T+G
Sbjct: 28 LIKELKQRGSFESETATKKRVEVLNILQKMTEDFVFKVSIKKNMSEGMAKDAGGKIFTFG 87
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGV+G SDID L + P+ T DFF + +LK+R E+ EI V DA VP+++ +
Sbjct: 88 SYRLGVYGPGSDIDTLIVVPKHVTR-NDFFETFYELLKTRDELEEIAPVPDAFVPIIKIE 146
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
F GI IDL +A L + V ++ + + L+++DE ++L+G R IL LVP F
Sbjct: 147 FAGISIDLIFARLDIPRVSRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILTLVPKQTVF 206
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
+ LRCIK+WA++R +Y N+ GF GGV A+LVA +CQ +P ++ FF Y+ W
Sbjct: 207 KHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNAVSAVIIEKFFHIYSQWA 266
Query: 326 WPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
WP PV+L+ +P L Y + + MP+ P P NIT ST
Sbjct: 267 WPQPVLLKQIEDGPLQVRVWNPKL----YAPDRQHRMPVITPAYPSMCATHNITSSTQKV 322
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV-RVYLSASNQDDLGDWVGWVK 432
I +EF RG + W LFE + +Y ++ V + SN ++ + G V+
Sbjct: 323 ILSEFQRGIEIMNGINSGSKTWSDLFERHDFFFRYKFYLCIVAATKSNSEEHLKYGGMVE 382
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R L+ KLE V+G+ +P
Sbjct: 383 SKLRLLVQKLELVEGIELAHP 403
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 210 bits (535), Expect = 1e-51, Method: Composition-based stats.
Identities = 134/434 (30%), Positives = 234/434 (53%), Gaps = 31/434 (7%)
Query: 50 SQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLS-LVQLMTNEGLVPSTEEEDKRRN- 107
S++L+ +P + P++ SV Q + E+ + ++ ++ E TEEE K+++
Sbjct: 1106 SKILISLQNP-------HMPIDTSVHKQQNSEKQMQQILDVLEGEYKYSETEEETKQKDE 1158
Query: 108 VIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEF 167
+++L++I+ W++ +A + Q+ +L +GSY L V+ +SDID +CL P F
Sbjct: 1159 KLKQLRQIIRDWIQAIAEEN---NHQLT-FGGELLFFGSYKLKVNSHDSDIDTVCLVPNF 1214
Query: 168 ATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENV 227
+ FF L N+L++R EV+E+ +K+A VP+++ KF GIL DL +A EN+
Sbjct: 1215 VDRDQHFFGDLVNILQNRKEVTELFPIKEASVPIIKMKFSGILFDLSFARAPPQYNGENI 1274
Query: 228 DVLNPFFLRDLDETSWKSLSGVRANKCILQL--VPDLEKFQPVLRCIKLWAKRRGVYGNL 285
D+ + L +DE S++S +G R + +++ + + E F+ L+CIKLWA RG+Y N+
Sbjct: 1275 DLTSNQMLLSMDERSYRSFNGCRVAEWLIRKDNIQNYENFKITLKCIKLWATNRGIYSNI 1334
Query: 286 HGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPW-PTPVMLQ-------DPML 337
G+L G+ ILVA +CQ +P N L+ FF Y++W W PV ++ + L
Sbjct: 1335 IGYLSGIGWTILVAKICQLYPNYPPNQLIERFFFLYSHWKWHDLPVYVEHIQEDVANTKL 1394
Query: 338 PAAGYPSE--TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDW 395
A + E R+ M I PC P N++ +T I+ + G+ + + + +
Sbjct: 1395 NADQWRPEFRDRNSMMIITPCFPCMNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEKTF 1454
Query: 396 HFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE------VQGLC 449
LF+PF + K+Y F+++ + A+N++D W G V+SR R L E+ +Q
Sbjct: 1455 SDLFKPFNFFKRYKHFLQINIVATNKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHP 1514
Query: 450 DPNPTEYIDVDVTE 463
PNP EY +++ E
Sbjct: 1515 YPNPFEYSPLELEE 1528
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 215/452 (47%), Gaps = 37/452 (8%)
Query: 75 LDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQI 134
L+Q+ R L + EG++ STE ++R V+ L V W+ + + + E
Sbjct: 13 LEQLMSTRKLETC--LKKEGIMESTEGYEQRNRVLANLNAFVKDWLYKYSLEHGKSPEAA 70
Query: 135 AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCV 194
A I T+GS+ LGVH DIDAL P+ T A FF ++ L R +V ++H
Sbjct: 71 QLIRAKIFTFGSFRLGVHSKNGDIDALICFPQSVTRAA-FFSSFYDALAQRDDVEDLHSA 129
Query: 195 KDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKC 254
+ A VP ++ F G+ +DL A L S+ ++D+ + LR+L ET +S++G R
Sbjct: 130 ESAAVPAIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPETCVRSINGRRVTDK 189
Query: 255 ILQLVPDL-EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
IL+L P E F LR IKLWAKRRG+YGN ++GGVHLAILVA +CQ P + +TL
Sbjct: 190 ILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAKICQLFPYATASTL 249
Query: 314 VANFFKTYAYWPWPTPVMLQDPM----------LPAAGYPSETRSLMPIRLPCSPHEYCH 363
V FF Y W W PV LQ P Y S+M I P P +
Sbjct: 250 VEKFFWHYKRWDWAIPVELQHVEDLGITHIPHWSPINNY--HDMSVMKILTPVYPSQNAS 307
Query: 364 SNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDD 423
+TRST Y+I+ E R + + + W L++ P+ Y+ ++ V +++ D
Sbjct: 308 YTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQIPFFGVYSHYICVQALTNSEQD 367
Query: 424 LGDWVGWVKSRFRSLILKLEEVQGLC-------------DPNPTEYIDVDVTEPHIVFYW 470
+ G V+S R+L+ LE + + +P+ D D E + W
Sbjct: 368 RTLYEGLVESTVRNLVTSLEFHPAVTYAIPIPKAFRRSPEKDPSTLEDEDTHERPPEYCW 427
Query: 471 ------GL--QPGRTNLLDIVAVEKDFLKNIH 494
GL P T LDI+ V DF + +
Sbjct: 428 RTLWFIGLVFDPKATEQLDILTVMSDFERRVR 459
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 187/355 (52%), Gaps = 21/355 (5%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
R+ ++ L+ + + ++K V ++ L + I I T+GSY LGV+G SDID L +G
Sbjct: 67 RKQILHLLQRVTIEFIKSVGRKKGLSQGAIDAAGGKIFTFGSYRLGVYGPGSDIDTLVVG 126
Query: 165 PEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL 221
P+ T EDFF + L+ + + ++ V DA VP+M+ + GI IDL +A L V
Sbjct: 127 PKHVTR-EDFFADFPSTLEQLAPKDSIEKLTSVPDAFVPIMKLELSGISIDLIFARLVVH 185
Query: 222 SVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGV 281
SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA+ R +
Sbjct: 186 SVPLNLDLKNKELLRGLDERELRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQSRAI 245
Query: 282 YGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ-------- 333
Y N+ GF GGV A+LVA VCQ +P+ + + ++ FF+ W WP PV+L+
Sbjct: 246 YSNVVGFPGGVAWAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWPQPVLLKPIEDGPLH 305
Query: 334 ----DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
+P + Y + LMPI P P NI+ ST I E RG + +
Sbjct: 306 MKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNISLSTKAVILRELKRGGDIVDKIF 361
Query: 390 RPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
W LF +SK Y ++ + S++ ++ W G V+S+ R L+L L+
Sbjct: 362 MGQLRWSDLFAKHSFFSKDYKYYLSITASSTTKEAQSVWSGLVESKLRHLVLALD 416
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 212/397 (53%), Gaps = 23/397 (5%)
Query: 68 FPLNPSVLDQMDEERSL----SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
+ + P + Q+ + L +L++ + + S + KR V+ ++ I A++++V
Sbjct: 7 YGVTPPISSQLPTDAELRATDALLEELKRQKTFESQADTAKREEVLASIQNIANAFIRQV 66
Query: 124 AWQRRLPKEQ--IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
A Q + PK I + TYGSY LGV+G SDID L + P++ T +D+F ++
Sbjct: 67 A-QEKEPKNDVLIRNARGRVFTYGSYRLGVYGPGSDIDTLIIAPKYVTR-DDYFKYFPDL 124
Query: 182 LKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPEN-VDVLNPFFLRD 237
L S + ++ + V DA VP+++F++ GI IDL ++ + +P + ++ + LR
Sbjct: 125 LVSMAPKDAITGLAVVTDAFVPIIKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSGLLRG 184
Query: 238 LDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAIL 297
LDE +SL+G R IL LVP+ F+ LR IKLWA+RR VY N+ GF GGV A+L
Sbjct: 185 LDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAML 244
Query: 298 VAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM----LPA-----AGYPSETRS 348
VA VCQ +PK + + +V FF + W WP PV+L+ P+ LP Y ++
Sbjct: 245 VARVCQLYPKATPSVIVNKFFLVISQWRWPQPVLLK-PIESGPLPVRVWNPRVYKGDSFH 303
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKK 407
LMP+ P P NITRS+ I E R + +M W LF +++
Sbjct: 304 LMPVITPAYPSMCATFNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFFTQG 363
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
Y ++ V SA +++D W G+V+S+ R L+ KLE+
Sbjct: 364 YKYYISVISSAKSKEDHKIWSGYVESKVRMLVQKLEQ 400
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 209/401 (52%), Gaps = 25/401 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + + + ++++ + + S E KR V+++L+ I +VK+VA +R
Sbjct: 13 PISTALPTEAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEFVKQVARKRE 72
Query: 129 LPKEQ-IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP- 186
E I + I TYGS+ LGV+G SDID L + P++ T +D+F + +L+
Sbjct: 73 EGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTR-DDYFEIFPGLLQKMTP 131
Query: 187 --EVSEIHCVKDAKVPLMRFKFDGILIDLPY---ACLHVLSVPENVDVLNPFFLRDLDET 241
++++ V DA VP+++F+F GI IDL + A L L + + LR LDE
Sbjct: 132 ADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGLDER 191
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+SL+G R I+ LVP+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA V
Sbjct: 192 ELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARV 251
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSL 349
CQ +PK + + +V FF WPWP PV+L+ +P L Y + L
Sbjct: 252 CQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKL----YRGDQFHL 307
Query: 350 MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKY 408
MPI P P NIT+S I+ E RG T ++M W LF ++ Y
Sbjct: 308 MPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGY 367
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
++ V +++ ++ W G+V+S+ R L+ LE+ Q +
Sbjct: 368 KYYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQHQSIA 408
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 202/405 (49%), Gaps = 21/405 (5%)
Query: 65 SFNFPLNPSVLDQM------------DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
S F + P VL+Q D E+S L M S +R ++ +L
Sbjct: 3 SSTFTVAPHVLEQAYKAIRTTPPEPKDLEQSAKLQTYMDEHFPTESDANITRRSLILAEL 62
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+ I AWVK+V ++ +P+E A+ IL GSY LGV+ +DID +C+ P T E
Sbjct: 63 RSIFRAWVKQVCMEKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTR-E 121
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF L + P+VS++ ++ A VPL+ F ++ I IDL A L S+PEN+++L+
Sbjct: 122 DFFSSLKEIFLKHPKVSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDD 181
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L +D + KSL+G R + +++L P+ E F VLR ++ WAKRRG+Y N G+LGGV
Sbjct: 182 HVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGV 241
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLP----AAGYPSE 345
+ ILV + Q +P + +TL+ FF W WP + L D L A
Sbjct: 242 NWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAGHN 301
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM-RPDFDWHFLFEPFPY 404
+MPI P P N++ + ++ EF RG +D++ + +W LFEP +
Sbjct: 302 RYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSEF 361
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
+ ++ V + QD+ W + +SR R L+ L LC
Sbjct: 362 FAVHQHYLAVEVYTEKQDEEQAWCSFCESRMRKLVESLAYNPALC 406
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 213/396 (53%), Gaps = 16/396 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + + ++ +L++ + +G ST E KR V++ L+ + A+VKRVA ++
Sbjct: 12 PLSTEMPTEEQRRQTDALLEELRQQGTFESTAETQKRFKVLESLRMVADAFVKRVAKEKA 71
Query: 129 LPKEQI-AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP- 186
+ + A I TYGS+ LGV+ SDID L + P++ + ED+F ML++
Sbjct: 72 PDNPTLFRDACAKIFTYGSFRLGVYMPGSDIDTLVVAPKYVSR-EDYFNYFPEMLQAMTP 130
Query: 187 --EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVD--VLNPFFLRDLDETS 242
++++ V+DA VP+++F+++GI IDL ++ + + +P + + + LR LDE
Sbjct: 131 PGSITDLTPVEDAFVPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLLRGLDEAE 190
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+S++G R IL LVP+ F+ LR IKLWA+RR +Y N+ GF GGV A++VA VC
Sbjct: 191 LRSVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWAMMVARVC 250
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLMPIRL 354
Q +PK + +V+ FF WPWP PV+L +D LP Y + +MPI
Sbjct: 251 QLYPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIMPIIT 310
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVR 413
P P NI++S+ I+ E R ++ ++ W LF ++ Y ++
Sbjct: 311 PAYPSMCATYNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTFFTSDYKYYIS 370
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
V +++ +D W G+V+S+ R L+ LE + +
Sbjct: 371 VISASTEKDAQNTWSGFVESKVRVLVQGLERHESIA 406
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 213/401 (53%), Gaps = 19/401 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + ++ S +L + + S E DKR V+ L+ I +V++VA ++
Sbjct: 12 PISVNLPTEAEKRASDALKDELRRQKTFESPSETDKRWKVLDSLQLICNEFVRKVATEKE 71
Query: 129 LPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
PK +I + TYGS+ LGV G SDID L + P++ T ED+F ++L +
Sbjct: 72 -PKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTR-EDYFKYFPDLLVAMA 129
Query: 187 ---EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSV-PENVDVLNPFFLRDLDETS 242
++++ V DA VP+++F++ I IDL ++ + + P+ D+ + LR LDE
Sbjct: 130 PAGAITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFADLKDSSLLRGLDEAE 189
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP+ F+ LR IKLWA+RR VY N+ GF GGV A+LVA VC
Sbjct: 190 LRSLNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVC 249
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM----LPA-----AGYPSETRSLMPIR 353
Q +PK + +V FF W WP PV+L+ P+ LP Y ++ LMP+
Sbjct: 250 QLYPKAETSVIVNKFFLVIGQWRWPQPVLLK-PIGSGPLPVRVWNPKVYKGDSFHLMPVI 308
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFV 412
P P NITRS+ I+ E RG + ++M W LF +++ Y ++
Sbjct: 309 TPAYPSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTFFTQGYRYYI 368
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
V ++ N++ W G+V+S+ R L+ KLE+ + +P
Sbjct: 369 SVVSASKNKEAHKVWSGYVESKVRMLVQKLEQHSSIALAHP 409
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 210/393 (53%), Gaps = 19/393 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ ++ ++ +L++ + +G S E DKR V+ L+ I +VKR A Q +
Sbjct: 13 PISTTLPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKRAA-QEK 71
Query: 129 LPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
P I + I TYGS+ LGV+G SDID L + P++ T+ + F + + +++ P
Sbjct: 72 EPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPNLLVEMAP 131
Query: 187 --EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPENVD--VLNPFFLRDLDET 241
++++ V +A VP+++F++ GI IDL + + L +P++ D + + LR L E
Sbjct: 132 PGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLRGLSEN 191
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+SL+G R IL LVP+ + F+ LR IKLWA+RR +Y N+ G+ GGV A+LVA V
Sbjct: 192 EVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARV 251
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----------PMLPAAGYPSETRSLMP 351
CQ +PK + +V FF WPWP PV+L++ + YPS+ MP
Sbjct: 252 CQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMP 311
Query: 352 IRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYAR 410
I P P N+ RS+ I+ E RG + ++M W LFE ++ +
Sbjct: 312 IITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKF 371
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++ V S ++ W G+V+SR R L+ KLE
Sbjct: 372 YLTVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 208/388 (53%), Gaps = 23/388 (5%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT----- 140
L++ + G+ EE +R ++ KL +V W++ ++ + P+ ++ T
Sbjct: 42 LIETLKPFGVFEEEEEPQRRILILGKLNNLVKEWIREISESKVSPESVFLDSGFTWGPCK 101
Query: 141 --ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I + Y LG +DIDALC+ P + DFF ++ LK + EV ++ V++A
Sbjct: 102 YRIGXWDYYFLG-----ADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAF 155
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R IL L
Sbjct: 156 VPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHL 215
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF
Sbjct: 216 VPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFF 275
Query: 319 KTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHEYCHSNITRST 370
++ W WP PV+L+ P LP PS+ LMPI P P + N++ ST
Sbjct: 276 LVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVST 335
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ EF +G T +++ +W LFE + +KY ++ + SA + +WVG
Sbjct: 336 RMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 395
Query: 431 VKSRFRSLILKLE--EVQGLCDPNPTEY 456
V+S+ R L+ LE E L NP +
Sbjct: 396 VESKIRILVGSLEKNEFITLAHVNPQSF 423
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 210/393 (53%), Gaps = 19/393 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ ++ ++ +L++ + +G S E DKR V+ L+ I +VKR A Q +
Sbjct: 13 PISTALPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKRAA-QEK 71
Query: 129 LPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
P I + I TYGS+ LGV+G SDID L + P++ T+ + F + + +++ P
Sbjct: 72 EPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPNLLVEMAP 131
Query: 187 --EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPENVD--VLNPFFLRDLDET 241
++++ V +A VP+++F++ GI IDL + + L +P++ D + + LR L E
Sbjct: 132 PGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLRGLSEN 191
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+SL+G R IL LVP+ + F+ LR IKLWA+RR +Y N+ G+ GGV A+LVA V
Sbjct: 192 EVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARV 251
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----------PMLPAAGYPSETRSLMP 351
CQ +PK + +V FF WPWP PV+L++ + YPS+ MP
Sbjct: 252 CQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMP 311
Query: 352 IRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYAR 410
I P P N+ RS+ I+ E RG + ++M W LFE ++ +
Sbjct: 312 IITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKF 371
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++ V S ++ W G+V+SR R L+ KLE
Sbjct: 372 YLTVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 192/360 (53%), Gaps = 23/360 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ +Q ++ + + +VK V+ ++ L + I I TYGSY LGV+G SDID
Sbjct: 46 ETERRKQTLQLIQRVTVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
L +GP+ + EDFF VL NM + ++ V DA VP+++ + GI IDL YA
Sbjct: 106 LVVGPKHVSF-EDFFSDFPPVLENM-APLGAIEKLTPVPDAFVPIIKIELSGISIDLIYA 163
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA
Sbjct: 164 RLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWA 223
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--- 333
+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 224 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIE 283
Query: 334 ---------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+P + Y + LMPI P P N++ ST + E RG +
Sbjct: 284 EGPLQMKVWNPQI----YHGDKYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDI 339
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W+ LF +S+ Y ++ + ++ ++D W G V+S+ R L+ L+
Sbjct: 340 ADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALD 399
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 208/405 (51%), Gaps = 20/405 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
+V+ + ++G E +R V+ KL +V ++ +A + ++P ++ ++ + I T+G
Sbjct: 16 VVEYLHSKGFFEDESESIQRERVLGKLSNLVNKFIMDIAKRNQIPIDK--KSLSKIFTFG 73
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH S +DID LC+ P F + E FF ++ L S+ ++EI V + VPL++FK
Sbjct: 74 SYRLGVHSSGADIDTLCVVPNFVSRNE-FFTTFYDELCSKDYITEISKVTNTFVPLIKFK 132
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
I IDL +A + + S+ N+D+LN L+ + E SL+G R IL VP++ F
Sbjct: 133 IKTIPIDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVPNISTF 192
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
LR IK WA++R VYG+ +G++GGV A+ VA VCQ +P + FF ++ WP
Sbjct: 193 HKTLRFIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPGADAFETIEKFFDVFSKWP 252
Query: 326 WPTPVMLQDPMLPAAGY----------PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIR 375
WP PV++++ +P Y P MP+ P P NIT ST + +
Sbjct: 253 WPQPVIIKE--VPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHNITNSTLFVAK 310
Query: 376 TEFLRG---HNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 432
EFLRG + D P L E + ++ + + L+ N + ++G+ +
Sbjct: 311 KEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPKEFSRFMGFAE 370
Query: 433 SRFRSLILKLEEVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQPG 475
+R R KLE ++ + P +YI DVT ++ L+ G
Sbjct: 371 TRVRMFAQKLENIENIEYAYTFPKKYILEDVTSKNVPLLKELKCG 415
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 192/360 (53%), Gaps = 23/360 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ +Q ++ + + +VK V+ ++ L + I I TYGSY LGV+G SDID
Sbjct: 46 ETERRKQTLQLIQRVTVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
L +GP+ + EDFF VL NM + ++ V DA VP+++ + GI IDL YA
Sbjct: 106 LVVGPKHVSF-EDFFSDFPPVLENM-APLGAIEKLTPVPDAFVPIIKIELSGISIDLIYA 163
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA
Sbjct: 164 RLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWA 223
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--- 333
+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 224 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIE 283
Query: 334 ---------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+P + Y + LMPI P P N++ ST + E RG +
Sbjct: 284 EGPLQMKVWNPQI----YHGDKYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDI 339
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W+ LF +S+ Y ++ + ++ ++D W G V+S+ R L+ L+
Sbjct: 340 ADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALD 399
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 190/348 (54%), Gaps = 9/348 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + D + L++ + G+ +E R + KL +V W++ ++ +
Sbjct: 22 PISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILSLGKLNNLVKEWIREISELKN 81
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + D F + LK + EV
Sbjct: 82 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DLFSSFYEKLKQQEEV 140
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 201 CRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLPCSPHE 360
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P +
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
N++ ST + EF +G T +++ +W LF+ + +KY
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKY 368
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 196/359 (54%), Gaps = 21/359 (5%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ +Q ++++V+ +VK V ++ L + I TYGSY LGV+G SDID
Sbjct: 46 ETERRQQTLQLIQKVVIEFVKTVGRRKGLSPAVLEAAGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFVVLHNMLK--SRP-EVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
L + P+ + +DFF +L+ S P + ++ V DA VP+++ +F GI +DL +A
Sbjct: 106 LIVAPKHV-LIDDFFSDFPPILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISLDLIFAR 164
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + S+P N+D+ N +LR LD+ +SL+G R IL+LVP + F+ LR IKLWA+
Sbjct: 165 LILPSIPLNLDLKNNDYLRGLDDKEVRSLNGTRVTDQILELVPQQKTFRLALRAIKLWAQ 224
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 225 RRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIED 284
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
+P + Y ++ LMPI P P NI+ ST I E RG +
Sbjct: 285 GPLQIKVWNPKI----YHTDRFHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDIV 340
Query: 386 RDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W+ LF +SK Y ++++ S+ ++ W G V+S+ R L+ L+
Sbjct: 341 DKIFAKQLTWNDLFTRHTFFSKDYKYYLQITASSKTKEADSVWSGLVESKLRHLVGALD 399
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 192/360 (53%), Gaps = 23/360 (6%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E ++R+ V+Q L+ + + +V+ V+ ++ L + + I TYGSY LGV+G SDID
Sbjct: 46 ETERRKQVLQLLQRVTVEFVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFV----VLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
L +GP+ + +DFF +L M S + ++ V DA VP+++ + GI IDL +A
Sbjct: 106 LVVGPKH-VLIDDFFAEFPPILQRM-ASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFA 163
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L + ++P N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IKLWA
Sbjct: 164 RLVIPAIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWA 223
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--- 333
+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 224 QRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIE 283
Query: 334 ---------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+P + Y + LMPI P P NI+ ST I E RG +
Sbjct: 284 DGPLQIKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDI 339
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ W LF ++ Y ++ + S+ ++ W G V+S+ R L+ L+
Sbjct: 340 VDKIFMKQLSWQDLFARHTFFTHDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALD 399
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 204/391 (52%), Gaps = 17/391 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + ++ +L + + +G S E + R+ VI +L++I A+VK+ + +
Sbjct: 11 PISTALPTEAEKRMHQALHEELRAQGTFESRAETEARKKVIAQLEKITTAFVKKATAETQ 70
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP-- 186
+ E + TYGSY LGV+G SDID L + P+ T + F + +++ P
Sbjct: 71 -NSFMVREAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKHVTTEQYFRLFPPLLVEMAPPG 129
Query: 187 EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENV--DVLNPFFLRDLDETSW 243
++++ V DA VP+++F+F GI IDL + + L+ +PE+ ++ + LR L E
Sbjct: 130 AITDLTPVPDAFVPIIKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTLLRGLSENEV 189
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G R IL LVP+ F+ LR IKLWA+R+ +Y N+ GF GGV A+LVA VCQ
Sbjct: 190 RSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVARVCQ 249
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----------PMLPAAGYPSETRSLMPIR 353
+PK + +V FF WPWP PV+L+D P+ Y S+ MPI
Sbjct: 250 LYPKATSAVVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNHRMPII 309
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
P P NI RS+ I E +G T ++M W LF + R+
Sbjct: 310 TPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTKHTFFTSDFRYYL 369
Query: 414 VYLSASNQDDLGD-WVGWVKSRFRSLILKLE 443
+S+S D + W G+++SR R L+ K+E
Sbjct: 370 TVISSSRTKDAQNVWSGFIESRVRVLVNKIE 400
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 193/373 (51%), Gaps = 28/373 (7%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E ++R+ V+Q L+ + +VK V+ ++ L + I TYGSY LGV+G SD
Sbjct: 43 SPAETERRKQVLQLLQRVTHEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRP---EVSEIHCVKDAKVPLMRFKFDGILIDLP 214
ID L +GP+ + +DFF +L+ + ++ V DA VP+++ + GI IDL
Sbjct: 103 IDTLVVGPKH-VLIDDFFSDFPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLI 161
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+A L V SVP N+D+ N +LR LDE +SL+G R IL+LVP + F+ LR IKL
Sbjct: 162 FARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKL 221
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ- 333
WA+RR +Y N+ GF GGV A+LVA VCQ +P + + +V FF+ W WP PV+L+
Sbjct: 222 WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKP 281
Query: 334 -----------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
+P + Y + LMPI P P NI+ ST I E RG
Sbjct: 282 IEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGG 337
Query: 383 NTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILK 441
+ + W+ LF +++ Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 338 DIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITASSRTKEAEAVWSGLVESKIRHLV-- 395
Query: 442 LEEVQGLCDPNPT 454
G D PT
Sbjct: 396 -----GALDRKPT 403
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 200/405 (49%), Gaps = 21/405 (5%)
Query: 65 SFNFPLNPSVLDQM------------DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
S F + P VL+Q D E+S L M S +R ++ +L
Sbjct: 3 SSTFTVAPHVLEQAYKAIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAEL 62
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
+ I WVK+V + +P+E A+ IL GSY LGV+ +DID +C+ P T E
Sbjct: 63 RSIFRQWVKQVCMDKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTR-E 121
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF L + P+VS + ++ A VP++ F ++ I IDL A L S+PEN+++L+
Sbjct: 122 DFFSSLKEIFLQHPKVSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDD 181
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L +D + KSL+G R + +++L P+ E F VLR ++ WAKRRG+Y N G+LGGV
Sbjct: 182 HVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGV 241
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLP----AAGYPSE 345
+ ILV + Q +P + +TL+ FF W WP + L D L A
Sbjct: 242 NWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAGHN 301
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM-RPDFDWHFLFEPFPY 404
+MPI P P N++ + ++ EF RG +D++ + +W LFEP +
Sbjct: 302 RYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSDF 361
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
+ ++ V + Q++ W G+ +SR R L+ L LC
Sbjct: 362 FAVHQHYLAVEVYTEKQEEEAAWCGFCESRMRKLVESLAYNPALC 406
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 206/386 (53%), Gaps = 21/386 (5%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D E L+ + + S EE KR+NV+ KL++++L V+RV ++ L E + E
Sbjct: 24 DNELHDQLLAELKAQNNFESPEETAKRQNVLVKLQKLLLQLVQRVGKKKGLNPELLKEAG 83
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSR---PEVSEIHCVK 195
I TYGS+ LGV+G SDID L L P+ T EDFF + +M++ +++E+ V
Sbjct: 84 GKIFTYGSFRLGVYGPGSDIDTLMLSPKHVTR-EDFFEYMPDMIRQAIPAEDITELVPVP 142
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
VP+++ + +GI IDL + LH VP N+++ + LR L ET K ++G R I
Sbjct: 143 GIGVPIIKTEIEGISIDLIWCTLHKDRVPPNLELNDSELLRGLSETDLKCVNGTRVTDRI 202
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L LVP F+ LR +K+WA++RG+YGN++G+ GGV A++VA VCQ +P+ + +T+VA
Sbjct: 203 LSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGVAYAMMVARVCQLYPRAAASTIVA 262
Query: 316 NFFKTYAYWPWPTPVMLQ----DPML------PAAGYPSETRSLMPIRLPCSPHEYCHSN 365
FF W WP+P+ LQ P L P + + R LMP+ P P
Sbjct: 263 KFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNF-RDKRHLMPVITPAYPVMNATHT 321
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWH-FLFEPFPYSKKYARFVRVYLSASNQDDL 424
ITRST + E RGH D+ W L + ++ Y ++ + ++ +DD
Sbjct: 322 ITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEFFTSAYQHYIVIVTASKTKDDQ 381
Query: 425 GDWVGWVKSRFRSLILKLEEVQGLCD 450
W G V SR R KL V+G+ D
Sbjct: 382 QAWAGLVTSRLR---FKL--VEGIED 402
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 204/390 (52%), Gaps = 26/390 (6%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
PS L + D +L+ + + + E +KR ++ ++ + + +VK V ++ L
Sbjct: 21 TPSELAEND-----NLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGLS 75
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPE 187
+ I + I YGSY LGV+G SDID L +GP+ + EDFF+ L+ +
Sbjct: 76 QAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAI-EDFFLDFPPTLERMAPKDS 134
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
+ ++ V DA VP+++ + GI IDL +A L V S+P ++D+ N LR LDE + ++
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP+ + F+ LR IKLWA+ R +Y N+ GF GGV A+LVA VCQ +P+
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQ 254
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLP 355
+ + +V FF+ YW WP PV+L+ +P + Y + LMPI P
Sbjct: 255 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKI----YHGDRFHLMPIITP 310
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRV 414
P N++ ST I E RG + + W LF +SK Y ++ +
Sbjct: 311 AYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNI 370
Query: 415 YLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
S+++++ W G V+++ R L++ L++
Sbjct: 371 TASSTSKEAQSVWSGLVEAKLRHLVIALDK 400
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 197/385 (51%), Gaps = 28/385 (7%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+ + + S E ++R+ V+Q ++ + +VK V+ ++ L + I TYG
Sbjct: 31 LISELKAQNNFESPAETERRKQVLQLIQRVTHEFVKVVSRKKGLSPAAVEAAGGKIFTYG 90
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP---EVSEIHCVKDAKVPLM 202
SY LGV+G SDID L +GP+ + +DFF +L+ + ++ V DA VP++
Sbjct: 91 SYRLGVYGPGSDIDTLVVGPKH-VLIDDFFSDFPPVLEKMAPPGAIEKMTPVPDAFVPII 149
Query: 203 RFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDL 262
+ + GI IDL +A L V SVP N+D+ N +LR LDE +SL+G R IL+LVP
Sbjct: 150 KLELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQQ 209
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA 322
+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA VCQ +P + + +V FF+
Sbjct: 210 KTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPHATGSVIVGKFFRIMN 269
Query: 323 YWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
W WP PV+L+ +P + Y + LMPI P P NI+ ST
Sbjct: 270 KWAWPQPVLLKPIEDGPLQIKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNISMST 325
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVG 429
I E RG + + W+ LF +++ Y ++ + S+ ++ W G
Sbjct: 326 KAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITASSRTKEAEAVWSG 385
Query: 430 WVKSRFRSLILKLEEVQGLCDPNPT 454
V+S+ R L+ G D PT
Sbjct: 386 LVESKIRHLV-------GALDRKPT 403
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 205/393 (52%), Gaps = 19/393 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + ++ +L + + +G S E KR V+ +L++I +VKR A Q +
Sbjct: 12 PISTALPTENEKRLHDALHKELRAQGTFESPAERAKREKVLAELEKITNVFVKRAA-QEK 70
Query: 129 LPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
PK I + + TYGSY LGV+G SDID L + P++ T+ + F + +++ P
Sbjct: 71 QPKNSILIRDAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKYVTVEQYFRIFPQVLVEMAP 130
Query: 187 --EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPE--NVDVLNPFFLRDLDET 241
+ ++ V +A VP+++F+FDGI IDL + + L +P N + + LR L E
Sbjct: 131 PGAIKDLTPVPEAFVPIIKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNLLRGLSEN 190
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+SL+G R IL LVP+ F+ LR IKLWA+R+ +Y N+ GF GGV A+LVA V
Sbjct: 191 EVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVARV 250
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD-----PMLPAAG-----YPSETRSLMP 351
CQ +PK + +V FF WPWP PV+L+D P+ A Y S+ MP
Sbjct: 251 CQLYPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRNHKMP 310
Query: 352 IRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYAR 410
I P P N+ ST I+ E +G T ++M W LF ++ +
Sbjct: 311 IITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDLFTKHTFFTNGFKY 370
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++ V S+ + W G+++SR R L+ KLE
Sbjct: 371 YLTVISSSRTKQAQNAWSGFIESRVRLLVNKLE 403
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 204/390 (52%), Gaps = 26/390 (6%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
PS L + D +L+ + + + E +KR ++ ++ + + +VK V ++ L
Sbjct: 21 TPSELAEND-----NLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGLS 75
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPE 187
+ I + I YGSY LGV+G SDID L +GP+ + EDFF+ L+ +
Sbjct: 76 QAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAI-EDFFLDFPPTLERLAPKDS 134
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
+ ++ V DA VP+++ + GI IDL +A L V S+P ++D+ N LR LDE + ++
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP+ + F+ LR IKLWA+ R +Y N+ GF GGV A+LVA VCQ +P+
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQ 254
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLP 355
+ + +V FF+ YW WP PV+L+ +P + Y + LMPI P
Sbjct: 255 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKI----YHGDRFHLMPIITP 310
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRV 414
P N++ ST I E RG + + W LF +SK Y ++ +
Sbjct: 311 AYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNI 370
Query: 415 YLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
S+++++ W G V+++ R L++ L++
Sbjct: 371 TASSTSKEAQSVWSGLVEAKLRHLVIALDK 400
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 204/390 (52%), Gaps = 26/390 (6%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
PS L + D +L+ + + + E +KR ++ ++ + + +VK V ++ L
Sbjct: 21 TPSELAEND-----NLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGLS 75
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPE 187
+ I + I YGSY LGV+G SDID L +GP+ + EDFF+ L+ +
Sbjct: 76 QAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAI-EDFFLDFPPTLERLAPKDS 134
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
+ ++ V DA VP+++ + GI IDL +A L V S+P ++D+ N LR LDE + ++
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP+ + F+ LR IKLWA+ R +Y N+ GF GGV A+LVA VCQ +P+
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQ 254
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLP 355
+ + +V FF+ YW WP PV+L+ +P + Y + LMPI P
Sbjct: 255 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKI----YHGDRFHLMPIITP 310
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRV 414
P N++ ST I E RG + + W LF +SK Y ++ +
Sbjct: 311 AYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNI 370
Query: 415 YLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
S+++++ W G V+++ R L++ L++
Sbjct: 371 TASSTSKEAQSVWSGLVEAKLRHLVIALDK 400
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 196/379 (51%), Gaps = 22/379 (5%)
Query: 81 ERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT 140
E + +L P +E E KR+ + L+ + + ++K V+ ++ L + I +
Sbjct: 27 ENDALIAELKLQNNFEPPSETE-KRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASGGK 85
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDA 197
I TYGSY LGV+G SDID L + P+ M EDFF +L+ + + ++ V DA
Sbjct: 86 IFTYGSYRLGVYGPGSDIDTLVVAPKH-VMREDFFAHFPTVLEKHAPKDAIEKMTPVPDA 144
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ + GI IDL +A L V SVP N+D+ N LR LDE + ++G R IL+
Sbjct: 145 FVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILE 204
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP + F+ LR IKLWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V F
Sbjct: 205 LVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKF 264
Query: 318 FKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSN 365
F+ W WP PV+L+ +P + Y + LMPI P P N
Sbjct: 265 FRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHN 320
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDL 424
++ ST I E RG + + W LF +S Y ++ + ++++++
Sbjct: 321 VSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQ 380
Query: 425 GDWVGWVKSRFRSLILKLE 443
W G V+S+ R L+ L+
Sbjct: 381 AIWSGLVESKLRHLVGALD 399
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 195/374 (52%), Gaps = 22/374 (5%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
+ +L P +E E KR+ + L+ + + ++K V+ ++ L + I + I TYG
Sbjct: 32 IAELKLQNNFEPPSETE-KRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASGGKIFTYG 90
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLM 202
SY LGV+G SDID L + P+ M EDFF +L+ + + ++ V DA VP++
Sbjct: 91 SYRLGVYGPGSDIDTLVVAPKH-VMREDFFAHFPTVLEKHAPKDAIEKMTPVPDAFVPII 149
Query: 203 RFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDL 262
+ + GI IDL +A L V SVP N+D+ N LR LDE + ++G R IL+LVP
Sbjct: 150 KIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQ 209
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA 322
+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+
Sbjct: 210 KTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMN 269
Query: 323 YWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
W WP PV+L+ +P + Y + LMPI P P N++ ST
Sbjct: 270 QWSWPQPVLLKHIEDGPLHMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMST 325
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVG 429
I E RG + + W LF +S Y ++ + ++++++ W G
Sbjct: 326 KAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSG 385
Query: 430 WVKSRFRSLILKLE 443
V+S+ R L+ L+
Sbjct: 386 LVESKLRHLVGALD 399
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 195/385 (50%), Gaps = 17/385 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+ + + P + + ++R VI KLK ++ V+ V ++ LP + + TY
Sbjct: 28 SLIAELKAQDNFPPSSDTERRDAVIAKLKGLLRQMVQIVGKKKGLPAGILETAGGEVYTY 87
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP---EVSEIHCVKDAKVPL 201
GS+ LGV+G SD+D L + P+ T E+FF + ++L+ E++E+ V P+
Sbjct: 88 GSFRLGVYGPNSDVDTLMVAPKHVTR-EEFFEYMPDLLRKSAAPGEITELVPVPGIGTPI 146
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
++ K G+ IDL + L V SVP+ +D+ + LR LD+T + ++G R ILQLVP
Sbjct: 147 IKLKIQGVDIDLIFCSLQVQSVPDKMDLADDNLLRGLDDTDVRCVNGTRVTNRILQLVPQ 206
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTY 321
+ F+ LR IKLWA+RR +YGN+ G+ GGV AILVA VCQ +PK +V FF
Sbjct: 207 TKTFRYALRAIKLWAQRRAIYGNIVGYPGGVAWAILVARVCQLYPKAVAPLIVQRFFFIV 266
Query: 322 AYWPWPTPVMLQ----DPMLPAAGYPSETR----SLMPIRLPCSPHEYCHSNITRSTFYK 373
W WP PV LQ ++ P+ +R LMPI P P + ST
Sbjct: 267 KRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVPSTNTAHTVGPSTKMV 326
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVK 432
+ E RG D+ W LFE ++ Y ++ V ++ ++D W G V+
Sbjct: 327 MMRELERGEQIIADIYSKSKPWKALFERHNFFTTAYKHYICVVTASKSKDAQDAWAGLVQ 386
Query: 433 SRFRSLILKLEEVQGLCDPNPTEYI 457
S+ + L+ +E D N E +
Sbjct: 387 SKIKWLVQGIES----SDANSIELV 407
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 198/384 (51%), Gaps = 22/384 (5%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
+ +L P +E E KR+ + L+ + + ++K V+ ++ L + I + I TYG
Sbjct: 32 IAELKLQNNFEPPSETE-KRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASGGKIFTYG 90
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLM 202
SY LGV+G SDID L + P+ M EDFF +L+ + + ++ V DA VP++
Sbjct: 91 SYRLGVYGPGSDIDTLVVAPKH-VMREDFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPII 149
Query: 203 RFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDL 262
+ + GI IDL +A L V SVP N+D+ N LR LDE + ++G R IL+LVP
Sbjct: 150 KIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQ 209
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA 322
+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+
Sbjct: 210 KTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMN 269
Query: 323 YWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRST 370
W WP PV+L+ +P + Y + LMPI P P N++ ST
Sbjct: 270 QWSWPQPVLLKHIEDGPLHMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMST 325
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVG 429
I E RG + + W LF +S Y ++ + ++++++ W G
Sbjct: 326 KAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSG 385
Query: 430 WVKSRFRSLILKLEEVQGLCDPNP 453
V+S+ R L+ L+ + +P
Sbjct: 386 LVESKLRHLVGALDRKSSIEIAHP 409
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 212/396 (53%), Gaps = 23/396 (5%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRN----VIQKLKEIVLAWVKRVA 124
P++ ++ + ++ S +L++ + + S + DKR + V+ L+EI +V++VA
Sbjct: 12 PISVTLPTEAEKRASDALIEELRRQKTFESPSDTDKRHSFRYKVLASLQEICNEFVRKVA 71
Query: 125 WQRRLPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNML 182
++ PK +I + TYGS+ LGV G SDID L + P++ T ED+F ++L
Sbjct: 72 REKE-PKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTR-EDYFKHFPDLL 129
Query: 183 KSRP---EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDL 238
S ++++ V DA VP+++F++ I IDL ++ + + + D L + LR L
Sbjct: 130 VSMAPPGSITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFDNLKDSSLLRGL 189
Query: 239 DETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILV 298
DE +SL+G R IL LVP+ F+ LR IKLWA+RR VY N+ GF GGV A+LV
Sbjct: 190 DEAELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLV 249
Query: 299 AHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM----LPA-----AGYPSETRSL 349
A VCQ +PK + + +V FF W WP PV+L+ P+ LP Y ++ L
Sbjct: 250 ARVCQLYPKAATSVIVNKFFLVIGQWRWPQPVLLK-PIGSGPLPVRVWNPKVYKGDSFHL 308
Query: 350 MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKY 408
MP+ P P NITRS+ I+ E RG + +M W LF ++ Y
Sbjct: 309 MPVITPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGY 368
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
++ V ++ +++ W G+V+S+ R L+ KLE+
Sbjct: 369 RYYISVVSASKDKEAHKVWSGYVESKVRMLVQKLEQ 404
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 191/362 (52%), Gaps = 21/362 (5%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E ++R+ + ++ + + +VK V+ ++ L + I I TYGSY LGV+G SD
Sbjct: 43 SPSETERRKQTLHLIQRVTVEFVKVVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
ID L +GP+ + EDFF +L+ + + ++ V DA VP+++ + GI IDL
Sbjct: 103 IDTLVVGPKHVSF-EDFFSDFPPLLEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLI 161
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
YA L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKL
Sbjct: 162 YARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKL 221
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ- 333
WA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 222 WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWNWPQPVLLKP 281
Query: 334 -----------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
+P + Y + LMPI P P N++ ST + E RG
Sbjct: 282 IEEGPLQMKVWNPKI----YHGDRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGG 337
Query: 383 NTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILK 441
+ + W+ LF +S+ Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 338 DIVDKIFLGQLTWNDLFTRHTFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGA 397
Query: 442 LE 443
L+
Sbjct: 398 LD 399
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 212/417 (50%), Gaps = 23/417 (5%)
Query: 77 QMDEERS--LSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQI 134
+ + ERS +V+ + +G E +R V+ L +V ++ +A + +P +
Sbjct: 5 KAETERSNEKKVVEYLQTKGFFEDENESIQRERVLGMLSNLVNKFIMDIAKRNEIPID-- 62
Query: 135 AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCV 194
+++ + I T+GSY LGVH S +DID LC+ P F + E FF V ++ L S+ ++EI V
Sbjct: 63 SKSLSKIFTFGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTVFYDELCSKSYITEISKV 121
Query: 195 KDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKC 254
+ VPL++FK I IDL +A + + S+P N+D+LN L+ + E SL+G R
Sbjct: 122 TNTFVPLIKFKIKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLNGNRVTDE 181
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLV 314
IL VP++E F LR +K WA++R VYG+ +G++GGV A+ VA VCQ +P +
Sbjct: 182 ILAQVPNIETFHKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPSADAFKTI 241
Query: 315 ANFFKTYAYWPWPTPVMLQDPMLPAAGYPSET----------RSLMPIRLPCSPHEYCHS 364
FF+ ++ W WP PV++++ +P Y + MP+ P P
Sbjct: 242 EKFFEVFSKWAWPQPVIIKE--VPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTH 299
Query: 365 NITRSTFYKIRTEFLRG----HNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASN 420
NIT ST + ++ EF RG + ++ P L E + ++ + + ++ N
Sbjct: 300 NITTSTLFVMKREFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDN 359
Query: 421 QDDLGDWVGWVKSRFRSLILKLEEVQGL--CDPNPTEYIDVDVTEPHIVFYWGLQPG 475
+ G ++G+ ++R R KLE ++ + P Y VT+ + LQ G
Sbjct: 360 SKEFGRFMGFAETRVRMFAQKLESIENIEYAYTLPKNYHLEGVTQKEVPLLKDLQCG 416
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 192/387 (49%), Gaps = 36/387 (9%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+N S + D E L M + V ++ + +R V+ K++ + L WV A +
Sbjct: 31 PINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAG 90
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ +E I T GSY L +H SDIDA+C+ P+F T +E FF L L + P V
Sbjct: 91 MSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCT-SELFFTTLKERLIAHPLV 149
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ ++ ++ A VP++ FD I IDL ACL V +VP +D+ D D+
Sbjct: 150 ANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDI-------DDDQ-------- 194
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
VP+ + F PV+RC++ WAK RG+Y N G+LGGV+ I+VA CQ +P
Sbjct: 195 ----------VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNA 244
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCSPHEYCH 363
+TL+ FFK A W WP + L P G + + MPI P P
Sbjct: 245 GPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSS 304
Query: 364 SNITRSTFYKIRTEFLRGHNTTRDLMRPDFD---WHFLFEPFPYSKKYARFVRVYLSASN 420
+N++R T + +EF RG +M+ + LFEP + +Y ++ V + AS+
Sbjct: 305 ANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASS 364
Query: 421 QDDLGDWVGWVKSRFRSLI--LKLEEV 445
+D+ WVGWV+SR R + ++E V
Sbjct: 365 EDEHRAWVGWVESRLRKVTNRFRMESV 391
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 186/354 (52%), Gaps = 21/354 (5%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
E +KR+ + L+ + + ++K V+ ++ L + I + I TYGSY LGV+G SDID
Sbjct: 46 ETEKRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDT 105
Query: 161 LCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
L + P+ M EDFF +L+ + + ++ V DA VP+++ + GI IDL +A
Sbjct: 106 LVVAPKH-VMREDFFAHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFAR 164
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA+
Sbjct: 165 LIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQ 224
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ---- 333
RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 225 RRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIED 284
Query: 334 --------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
+P + Y + LMPI P P N++ ST I E RG +
Sbjct: 285 GPLHMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKSVILRELRRGGDMV 340
Query: 386 RDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
+ W LF +S Y ++ + +++ ++ W G V+S+ R L
Sbjct: 341 DKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTTKEAQAIWSGLVESKLRHL 394
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 182/342 (53%), Gaps = 17/342 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
D+E + L++ + G S KR V+ L+++ +V V+ ++ + + +
Sbjct: 21 DKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYEVSLRKNMTQGMAKDAG 80
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGV+G SDIDAL + P T EDFF V +L+ RPE+ EI+ VK+A
Sbjct: 81 GKIFTFGSYRLGVYGPSSDIDALVVVPRHVT-REDFFTVFEKILRGRPELEEINSVKEAF 139
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +F GI IDL +A L + VP ++ + + L+++DE ++L+G R IL+L
Sbjct: 140 VPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTRVTDEILRL 199
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP F+ LR IK+WA++R VY N++GF GGV A+LVA +CQ +P ++ FF
Sbjct: 200 VPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLYPNAVSAVILEKFF 259
Query: 319 KTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNI 366
+ Y+ W WP PV+L+ +P L Y + + MP+ P P NI
Sbjct: 260 QIYSQWNWPQPVLLKQIEDGPLQVRVWNPRL----YAMDRQHRMPVITPAYPSMCATHNI 315
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
T ST I EF RG ++ W L E + +Y
Sbjct: 316 TNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQY 357
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 233/487 (47%), Gaps = 53/487 (10%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D + + +L++ +T + + E +R V+ ++++V +V+R + + + +
Sbjct: 22 EADNKLNDNLIETLTRLNVFETLEGNKRREEVLAHVQKVVEEFVRRAGKLKGIAQSTLDV 81
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM---LKSRPEVSEIHC 193
I +GSY LGVHG SDID L + P+ + EDFF + ++ L + ++SE+
Sbjct: 82 AGGKIFFFGSYALGVHGPTSDIDTLIVVPKHVFI-EDFFKIFPSIFRELSNAEDISELVP 140
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLDETSWKSLSGVRAN 252
V+DA VP+++ ++ G+ +DL +A + +S VP+ ++ ++ LR L+ET+ +S++G R
Sbjct: 141 VEDAYVPIIKMEYRGVSLDLLFASMPTMSSVPKELETVDKSVLRHLEETTIRSVNGTRVV 200
Query: 253 KCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT 312
K +L VP F+ LR +KLWA RR +YG + G+ GG+ AI+VA +CQ +P T
Sbjct: 201 KELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGIAWAIMVARICQLYPMACGAT 260
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAG----------YPSETRSLMPIRLPCSPHEYC 362
+++ FF W WP PVML++ LP G YP + R LMP+ P P
Sbjct: 261 ILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLMPVITPAFPAMCS 320
Query: 363 HSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQ 421
+T ST + EF R RD+ W LF +++ + ++ V ++ +
Sbjct: 321 THTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFNNHSFFTQDHKYYLSVIAASRTK 380
Query: 422 DDLGDWVGWVKSRFRSLILKLEEVQGLCD---PNPTEYIDV------------------- 459
+ + G V+S+ R L+ +++ Q D P P + V
Sbjct: 381 EADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFERVHRCKNEDEVEAVTKGSLDY 440
Query: 460 ----------DVTEPHIV----FYWGLQ-PGRTNLLDIVAVEKDFLKNIHNGFQGSPGRM 504
TE HI+ FY GL+ P + LDI + F I G M
Sbjct: 441 MIPVSQVPAAGTTEDHIIYTMTFYIGLRLPKERSTLDISYITNHFRSKITESKLYDEGTM 500
Query: 505 GLLVVQA 511
+ VV
Sbjct: 501 SVKVVHT 507
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 179/337 (53%), Gaps = 24/337 (7%)
Query: 149 LGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDG 208
LGVHG SDIDAL +GP + DFF L L V+E+ V A VP+++ +F G
Sbjct: 94 LGVHGRGSDIDALVVGPSYVDRDRDFFGALAAALAETAAVAELQPVPGAHVPVIKMRFHG 153
Query: 209 ILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPV 268
+ +DL YA + + VP ++D+ LR LD + +SL+GVR IL+LVPD F+
Sbjct: 154 VQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVRVADEILRLVPDAAAFRTT 213
Query: 269 LRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPT 328
LRC+K WAK RGVY N+ GFLGGV AILVA VC +P S + L+ FF+ +A W WP+
Sbjct: 214 LRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYPNASPSMLLPRFFRVFARWKWPS 273
Query: 329 PVMLQD------------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
PVML+ P+ P + LMPI P P N++ +T I
Sbjct: 274 PVMLRAIEHNDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITE 333
Query: 377 EFLRGHNTTRDLMRPDF---DWHFLFEPFPYSKKYARF--VRVYLSASNQDDLGDWVGWV 431
+ G +++++ W LF+PF + Y + V V ++ +DDL +W GWV
Sbjct: 334 QLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWV 393
Query: 432 KSRFRSLILKLE-EVQG--LCDPNPTEYIDVDVTEPH 465
+SR R L ++E + G LC +P Y EPH
Sbjct: 394 ESRLRLLSARVEADTSGMLLCHLHPQPY----AAEPH 426
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 197/370 (53%), Gaps = 19/370 (5%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQ--IAETHATILTYGSYGLGVHGSESDI 158
E +KR V++ L+EI A+VK VA +++ P I + + YGS LGV G SDI
Sbjct: 44 ETEKRFAVLRSLQEIADAFVKTVA-RKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDI 102
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRP---EVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
D L + P + T ED+F +L ++++ V DA VP+++F+F GI IDL +
Sbjct: 103 DTLVVAPRYVTR-EDYFEHFPGLLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIF 161
Query: 216 ---ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
A + L N ++ + LR LDE +S++G R I+ LVP+ F+ LR I
Sbjct: 162 SRIATMKQLPADPNWNLSDSNLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAI 221
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML 332
KLWA+RR +YGN+ GF GGV A+LVA VCQ +P+ + + +V FF WPWP PV+L
Sbjct: 222 KLWAQRRAIYGNIVGFPGGVAWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLL 281
Query: 333 ---QDPMLPA-----AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+D L A YP + LMPI P P NIT+S+ I E ++ +
Sbjct: 282 KAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADL 341
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
T +M W LF+ ++K + +++V ++ +++ W G+V+S+ R L+ LE
Sbjct: 342 TNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLE 401
Query: 444 EVQGLCDPNP 453
+ + P
Sbjct: 402 RHESIAVARP 411
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 207/392 (52%), Gaps = 17/392 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + ++ + +L + +G S E +KR+ V+ +L++I A+V+R A ++
Sbjct: 11 PISTALPTEQEKALNKALHDELRAQGTFESRAETEKRKEVLAQLEKITNAFVQRAAREKH 70
Query: 129 LPKE-QIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP- 186
I + + TYGSY LGV+G SD+D L + P++ T+ + F + +++ P
Sbjct: 71 GKNAILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFRIFPEVLVEMAPP 130
Query: 187 -EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPENVD--VLNPFFLRDLDETS 242
++++ V +A VP+++F+F GI IDL + + L +P + + + LR L E +
Sbjct: 131 AAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNLLRGLSENA 190
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+SL+G R IL LVP+ F+ LR IKLWA+R+ +Y N+ G+ GGV A+LVA VC
Sbjct: 191 VRSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVC 250
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----------PMLPAAGYPSETRSLMPI 352
Q +PK + +V FF WPWP PV+L+D P+ Y S+ MPI
Sbjct: 251 QLYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRNHKMPI 310
Query: 353 RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARF 411
P P N+ RS+ I+ E +G T ++M W LF ++ + +
Sbjct: 311 ITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKHTFFTSGFKYY 370
Query: 412 VRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ V S+ + W G+++SR R L+ K+E
Sbjct: 371 LTVISSSRTKKAQNVWSGFIESRVRLLVNKIE 402
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 183/366 (50%), Gaps = 25/366 (6%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
STE +R V+ K+ ++ WVK VA ++ L ++ + + T GSY LGVH +D
Sbjct: 3 STEGIQRRERVLVKMGNLMREWVKGVAVKKGLNRDAVEGAGGELFTSGSYRLGVHEPGAD 62
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID + + P T EDFF L ++ P+V+ V++A VP++ F ++GI IDL +A
Sbjct: 63 IDTIAVAPNICTR-EDFFDSLAERIRRHPDVTNFVPVENAAVPILTFDWEGINIDLLFAR 121
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK----FQPVLRCIK 273
L+ SVP + D+ N L +D + KSL+G R I LV ++ F V+R ++
Sbjct: 122 LNASSVPRDFDIDNDLVLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFLTVVRLVR 181
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
WAK RG+Y N G+ GGV++ I VA V Q +P +L+ FF + W WP PVML
Sbjct: 182 KWAKARGLYSNKMGYWGGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRWPNPVMLT 241
Query: 334 DPMLPAAGYP-------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT- 385
P G P + R + P+ P P +++R T + EF RGHN
Sbjct: 242 KPHDAELGLPVWNSFQAANMRQVAPMVTPAYPAMNSTLSVSRQTLQILHEEFCRGHNVVD 301
Query: 386 ---RDLMRPDFD---------WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
+D + D W LFEP + Y ++ + + +Q D W G+V+S
Sbjct: 302 KLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPYYLSLCIVGPSQADAQAWAGFVES 361
Query: 434 RFRSLI 439
R R L+
Sbjct: 362 RLRKLV 367
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 197/370 (53%), Gaps = 19/370 (5%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQ--IAETHATILTYGSYGLGVHGSESDI 158
E +KR V++ L+EI A+VK VA +++ P I + + YGS LGV G SDI
Sbjct: 44 ETEKRFAVLRSLQEIADAFVKTVA-RKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDI 102
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRP---EVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
D L + P + T ED+F +L ++++ V DA VP+++F+F GI IDL +
Sbjct: 103 DTLVVAPRYVTR-EDYFEHFPGLLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIF 161
Query: 216 ---ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
A + L N ++ + LR LDE +S++G R I+ LVP+ F+ LR I
Sbjct: 162 SRIATMKQLPADPNWNLSDSNLLRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAI 221
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML 332
KLWA+RR +YGN+ GF GGV A+LVA VCQ +P+ + + +V FF WPWP PV+L
Sbjct: 222 KLWAQRRAIYGNIVGFPGGVAWAMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLL 281
Query: 333 ---QDPMLPA-----AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
+D L A YP + LMPI P P NIT+S+ I E ++ +
Sbjct: 282 KAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADL 341
Query: 385 TRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
T +M W LF+ ++K + +++V ++ +++ W G+V+S+ R L+ LE
Sbjct: 342 TNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLE 401
Query: 444 EVQGLCDPNP 453
+ + P
Sbjct: 402 RHESIAVARP 411
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 190/380 (50%), Gaps = 34/380 (8%)
Query: 96 VPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSE 155
+ S E +R V+ +LK + AWV+ V + L E +E + T GSY L VH
Sbjct: 7 IESDGELRRRERVMGELKRLFQAWVRSVCKAKGLSDELASEAGGKLYTSGSYRLRVHEPG 66
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
+DID++C+ P T EDFF L ML P+V + V+ A VP+M F DG+ IDL +
Sbjct: 67 ADIDSICVAPNHCTR-EDFFDTLKAMLLEHPQVENLRSVETAVVPIMTFDLDGVNIDLLF 125
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP-DLEKFQPVLRCIKL 274
A L + ++P ++D+ L+ +DE + KSL+G R I +LV + E F VLR ++
Sbjct: 126 AHLPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARV 185
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD 334
WAKRRG+Y N G+ GG++ ILVA +CQ PK + + L+ FF +A W WP P +L
Sbjct: 186 WAKRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCR 245
Query: 335 PMLPAAG----------------YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
P+ G Y + +LMPI P P +N+ +F +R EF
Sbjct: 246 PLDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEF 305
Query: 379 LRGHNTTRDLMR------------PDFD---WHFLFEPFPYSKKYARFVRV-YLSASNQD 422
RG + ++ PD W L E + KY ++ V L ++
Sbjct: 306 ARGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKE 365
Query: 423 DLGDWVGWVKSRFRSLILKL 442
D ++ G++ SR R L+ K+
Sbjct: 366 DFDNFKGFLSSRLRKLVEKM 385
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 207/405 (51%), Gaps = 28/405 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+N + D RS L+ ++ L + R V+ +L IV+ WV V ++
Sbjct: 121 PVNMKLPQDADIHRSNELISVLRALNLYETAAGNLLRERVLNELNRIVVEWVVEVGMEQG 180
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L +++ + I T+GSY LGV SDID LC+ P T E FF +LH L+ V
Sbjct: 181 LDEQEARQAGGKIFTFGSYRLGVTTPGSDIDTLCVTPRHVTR-EAFFKILHAKLQQDARV 239
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSWKSLS 247
S++ V DA P+++F FDG+ IDL +A L + +P + + L N F LR +DE + +S++
Sbjct: 240 SKLTPVPDAYTPVLKFNFDGVEIDLLFARLPLPVIPSSWNSLENDFVLRHVDEKTARSVN 299
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R +L+LVP+ E F+ LR +K WAK RG+Y N+ G+LGG+ AILVA CQ +P
Sbjct: 300 GSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGISWAILVARCCQLYPN 359
Query: 308 GSLNTLVANFFKTYAYWPWP-TPVML----QDPMLPAAGYP--------SETRSLMPIRL 354
+ + L+ FF Y+ W W +PV+L + + + + + L+PI
Sbjct: 360 FAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHLLPIIT 419
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL----MRPDFDW----HFLFEPFPYSK 406
P P N++ ST I EF N R + + W H + +P ++
Sbjct: 420 PAFPSMNSTHNVSLSTKRVITDEFA---NAKRIFDVWDKKKEISWTEALHLVLKPLDFT- 475
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDP 451
+ F+ + + A N+ W+GWV+S+ R L+ +LE + C P
Sbjct: 476 SFKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLERLAA-CPP 519
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 173/323 (53%), Gaps = 10/323 (3%)
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
KE +A+ I T+GSY LGV+ ++IDALC+ P D+F +LK +PEV+E
Sbjct: 294 KEHVAKLGGKIYTFGSYRLGVNHKGANIDALCVAPRNIERL-DYFGSFFELLKKQPEVTE 352
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
V++A VP+++ FDGI IDL +A L + +P N D+ + L++LD +SL+G R
Sbjct: 353 CRAVEEALVPVVKMNFDGIKIDLLFARLALKEIPNNFDLGDDMLLKNLDPKLVRSLNGCR 412
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
A IL+LVP+++ F+ LR IKLWAK+ G+Y N G+ GGV +LVA CQ P
Sbjct: 413 ATDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQ-LPNVVA 471
Query: 311 NTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYC 362
T V FF + W WP PV L+ P G+ + LMPI P P
Sbjct: 472 ATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITPAYPQPNS 531
Query: 363 HSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQD 422
+++ ST + EF G T ++M W LFE + KY + + ++++N D
Sbjct: 532 TFHVSSSTRKVMLNEFNSGMQITDEIMLGKAGWDKLFEAPSFFFKYRYVIVLLVTSNNTD 591
Query: 423 DLGDWVGWVKSRFRSLILKLEEV 445
D +W V+S+ R LI LE +
Sbjct: 592 DHLEWCEMVESKIRYLIQNLERI 614
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 201/381 (52%), Gaps = 14/381 (3%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D ++ SL+ + +E + + E +R +V++ ++ +V +V+RV ++ + + I
Sbjct: 24 EQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVRRVGKKKGVQQSIIDA 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK---SRPEVSEIHC 193
I T+GS+ LGVHG +SDID L + P+F ++ +DFF + + K + ++ E
Sbjct: 84 AGGKIFTFGSFALGVHGPKSDIDTLVVAPKFVSI-DDFFAIFPSTFKELCNEKDIQEFVP 142
Query: 194 VKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRAN 252
V+DA VP+++ ++ G+ IDL + L S+P N+ + L L E++ +S++G R
Sbjct: 143 VEDAFVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIEKKDLEGLSESATRSVNGTRVT 202
Query: 253 KCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT 312
+L VP F+ LR IKLW+ RRG+YG + G+ GGV AI+VA +CQ +P + T
Sbjct: 203 NELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLYPMANGAT 262
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAG--------YPSETRSLMPIRLPCSPHEYCHS 364
+V+ FF W WP PVML+ G Y + LMPI P P
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDD 423
+ ST ++ EF R + +D+ DW LFE ++K + ++ V ++ ++
Sbjct: 323 TVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHTFFTKDHKYYLSVVAASRTKEA 382
Query: 424 LGDWVGWVKSRFRSLILKLEE 444
+ G V+S+ R +I +++
Sbjct: 383 NSTFSGLVQSKIRHIIKGIDD 403
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 213/418 (50%), Gaps = 22/418 (5%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
+V P+ + P P++ ++ + + ++++ + + S E KR V+++L
Sbjct: 1 MVGQGHPLGVTP----PISTALPTDAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQL 56
Query: 113 KEIVLAWVKRVAWQRRLPKEQ-IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMA 171
+ I +VK+VA +R E I + I TYGS+ LGV+G SDID L + P++ T
Sbjct: 57 QTICDEFVKQVARKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTR- 115
Query: 172 EDFFVVLHNMLKSRP---EVSEIHCVKDAKVPLMRFKFDGILIDLPY---ACLHVLSVPE 225
+D+F + +L+ ++++ V DA VP+++F+F GI IDL + A L L
Sbjct: 116 DDYFEIFPGLLQKMTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDP 175
Query: 226 NVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNL 285
+ + LR LDE +SL+G R I+ LVP+ F+ LR IKLWA+RR +Y N+
Sbjct: 176 QWSLADSNLLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANI 235
Query: 286 HGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML----QDPMLPAAG 341
GF GGV A+LVA VCQ +PK + + +V FF WPWP PV+L + P+
Sbjct: 236 MGFPGGVAWAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVW 295
Query: 342 YPSETRS----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHF 397
P R LMPI P P NIT+S I+ E RG T ++M W
Sbjct: 296 NPKLYRGDQFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGD 355
Query: 398 LFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCD-PNP 453
LF ++ Y ++ V +++ ++ W G+V+S+ + L+ Q + PNP
Sbjct: 356 LFIKHTFFTSGYKYYISVVTTSTTKEAHKIWSGYVESKVQEGSLQYLAGQETTETPNP 413
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 186/331 (56%), Gaps = 16/331 (4%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHA--TILTYGSY 147
M E L+PS E +R + KL E+ +VKRV + L EQ +E + + T+GSY
Sbjct: 1 MEAENLLPSESESARRVRTLAKLNEMCRDFVKRVYEKNNL-MEQYSEENPPYQLRTFGSY 59
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFD 207
L VH +D+D + + +D F L+ +++R +++ + V++A+VP+++F+ D
Sbjct: 60 RLDVHLPGADMDTVMIVTRH-IHRDDMFNDLYVAMQARKDITNLIKVQEARVPVIKFQMD 118
Query: 208 GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQP 267
DL A L ++PE+ DV + L+++D+ S SL+GVR I LVP ++ +
Sbjct: 119 EFEFDLAMARLSYATIPEDFDVTDDKHLKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLKY 178
Query: 268 VLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWP 327
+R +KLWAK+RGVY N+ GFLGG+ L I+ A + Q +PK + L+ FF TY+ W WP
Sbjct: 179 CIRALKLWAKKRGVYKNVLGFLGGISLEIMAARIGQLYPKALPSRLLYFFFFTYSQWKWP 238
Query: 328 TPVML-------QDPMLPAAGYP----SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
PV L D LP G+ S+ R LMPI PC P + +N+++ST ++
Sbjct: 239 QPVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQNATANVSKSTLKVMQE 298
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPF-PYSK 406
EF R + + ++ + +W LFEP P+SK
Sbjct: 299 EFTRAKDICKQILEGNAEWSDLFEPLDPFSK 329
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 199/380 (52%), Gaps = 7/380 (1%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+D E S LV+ + + G + E R+ V + + +IV ++++V +++ +
Sbjct: 29 IDIEASRKLVEFLDSAGAIADAEAMKHRQAVFETVSKIVDQFIEKVRVNKKMEPPEGEVY 88
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ GSY LGV +SDID + L P+F E+FF + + +L + +V + V++A
Sbjct: 89 KGKLFYSGSYKLGVCSPKSDIDCVILAPQF-VQKEEFFSIFYELLAADTKVKGLIKVEEA 147
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ +D I D+ +A L + ++ +++D+ L +L + S ++L+ +R N +++
Sbjct: 148 YVPIIKLTYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSKLSVRALNSLRVNNMVIK 207
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP+L+ F+ +L+ ++ WA +RG+YGN++G+ GGV+LAIL A VCQ +P S L F
Sbjct: 208 LVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAFVCQRYPTASPAMLALYF 267
Query: 318 FKTYAYWPWPTPVMLQDPMLPA-----AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
F + W WPTP+ + P S+ +MPI P P + T S+
Sbjct: 268 FSEISQWTWPTPIYINRPNYGELLSWDPTTESDHNDVMPIITPAYPSTNSQRSATTSSRN 327
Query: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 432
+I E ++ +++ D W + E + + Y ++ + + A D W G V
Sbjct: 328 RIIQEMVKALQIMPNIITGDLPWSAVCEDHEFFESYKNYIEIDIRAEGLADYNWWKGTVI 387
Query: 433 SRFRSLILKLEEVQGL-CDP 451
S+ + LI LE ++ + C P
Sbjct: 388 SKVKRLITSLEAIERVKCAP 407
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 195/382 (51%), Gaps = 16/382 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA-WQRRLPKEQIAET 137
D + S L+ L+ + L + E + +R ++++ L ++ +V+R A R L ++ ++
Sbjct: 28 DIKASRELLNLLKSYNLYETDEGKKRREDILESLNRLLQQFVRRQAKINRGLTDQEASQV 87
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+LT+GSY LG+ +SDID LCL P T E FF +N L +S++ V DA
Sbjct: 88 SGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVT-RESFFSDFYNTLTKVEGISKLQPVPDA 146
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
P+++ F I ID+ +A L +V +++VL+ LR++++++ +S++G R IL
Sbjct: 147 YTPVIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDSTVRSINGCRVASYILD 206
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
VP+ F+ LR IKLWA RR +Y + G+LGGV AIL A VCQ +P + N L+ F
Sbjct: 207 SVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPNCAPNQLIEKF 266
Query: 318 FKTYAYWPWPTPVML----QDPMLPAAGY---------PSETRSLMPIRLPCSPHEYCHS 364
F+ ++ W W PV L + P +P P + LMPI P P
Sbjct: 267 FRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPSMNSTH 326
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRPDFD-WHFLFEPFPYSKKYARFVRVYLSASNQDD 423
N+T +T I E +R + + + W + E Y F+ + + S +
Sbjct: 327 NVTATTKKVITEELMRALEIFKTPNLSNLELWEKVLEEQDVFSNYKHFLVIEVYGSTEHA 386
Query: 424 LGDWVGWVKSRFRSLILKLEEV 445
G W GW+ SR R LI +LE +
Sbjct: 387 HGKWEGWIGSRMRFLISRLENL 408
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 197/384 (51%), Gaps = 19/384 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA-WQRRLPKEQIAET 137
D + S L+ L+ + L + E + +R ++++ L ++ +V+R A R L ++ ++
Sbjct: 28 DLKASRELLNLLKSHNLYETEEGKKRREDILESLNRLLQQFVRRQAKITRGLTDQEASQV 87
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+LT+GSY LG+ +SDID LCL P T E FF +N L +S++ V DA
Sbjct: 88 SGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVT-RESFFSDFYNTLNKVDGISKLQAVPDA 146
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
P+++ F I ID+ +A L +V +++VL+ LR++++++ +S++G R IL
Sbjct: 147 YTPVIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDSTVRSINGCRVASYILD 206
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
VP+ F+ LR IKLWA RR +Y + G+LGGV AIL A VCQ +P + N L+ F
Sbjct: 207 SVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPNCAPNQLIEKF 266
Query: 318 FKTYAYWPWPTPVML----QDPMLPAAGY---------PSETRSLMPIRLPCSPHEYCHS 364
F+ Y+ W W PV L + P +P P + LMPI P P
Sbjct: 267 FRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPSMNSTH 326
Query: 365 NITRSTFYKIRTEFLRGHN--TTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQD 422
N+T +T I E +R T +L + W + E Y F+ + + SN+
Sbjct: 327 NVTATTKRVITEELMRALEIFKTSNLTNVEL-WEKVLEEEDVFSNYKHFLVIEVYGSNEH 385
Query: 423 DLGD-WVGWVKSRFRSLILKLEEV 445
+ W GW+ SR R LI +LE +
Sbjct: 386 VAHNKWEGWIGSRMRFLISRLENL 409
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 204/402 (50%), Gaps = 21/402 (5%)
Query: 68 FPLNPSVLDQ------------MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEI 115
FP+ PS L+Q +D E+S L M + +R ++ +L+ I
Sbjct: 6 FPVAPSKLEQAYKAIRVTPPEPIDLEQSKKLKDYMDKHFPTENMVNITRRSLILAELRTI 65
Query: 116 VLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF 175
WVK+V ++ +P+E A+ IL GSY LGV+ +DID +C+ P+ T EDFF
Sbjct: 66 FRDWVKQVCIRKGVPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITR-EDFF 124
Query: 176 VVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFL 235
L + +V+ ++ ++ A VPL+ F ++ I IDL A L ++PE++++LN L
Sbjct: 125 TSLKKIFMQHSKVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQIL 184
Query: 236 RDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLA 295
+D + KSL+G R + +++L P+ + F VLR ++ WAKRRG+Y N G+LGGV+
Sbjct: 185 VGVDAATEKSLNGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWC 244
Query: 296 ILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLPA----AGYPSETRS 348
ILV + Q +P + TL+ FF A W WP + L +D L A +
Sbjct: 245 ILVCFINQLYPTAAPTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVGNNRYH 304
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM-RPDFDWHFLFEPFPYSKK 407
+MPI P P N++ + ++ EF R ++++ R +W LFE +
Sbjct: 305 VMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEILNRGAVEWDPLFESSDFFAV 364
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLC 449
++ V + +N++D W + +SR R LI L + LC
Sbjct: 365 QQHYLAVDVYTTNREDEQAWCSFCESRIRKLIESLAYIPMLC 406
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 204/393 (51%), Gaps = 19/393 (4%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ ++ ++ +L + + +G S E +KR V+ L+ I +VKR A Q
Sbjct: 13 PISTALPTDAEKRQTDALFKELRAQGTFESQAETEKRWAVLADLQRITDEFVKRAA-QES 71
Query: 129 LPKEQI--AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE--DFFVVLHNMLKS 184
P I + I TYGS+ LGV+G SDID L + P++ T+ + D F L +
Sbjct: 72 EPHNSILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPKLLEEMAP 131
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL-SVPENVD--VLNPFFLRDLDET 241
++++ V +A VP+++F++ GI IDL + + L +P++ + + N LR L E
Sbjct: 132 PGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNNNLLRGLSEN 191
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+SL+G R IL LVP+ + F+ LR IKLWA+RR +Y N+ G+ GGV A+LVA V
Sbjct: 192 EVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARV 251
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----------PMLPAAGYPSETRSLMP 351
CQ +PK + +V FF WPWP PV+L++ + YPS+ MP
Sbjct: 252 CQLYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMP 311
Query: 352 IRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYAR 410
I P P N+ RS+ I+ E RG ++M W LFE ++ +
Sbjct: 312 IITPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKHTFFTNGFKF 371
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
++ V S ++ W G+V+SR R L+ KLE
Sbjct: 372 YLTVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 211/406 (51%), Gaps = 27/406 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ S+ + + + + +L+ + + S E +KR V+ L+ I A+VK VA +R
Sbjct: 12 PVSVSLPSEFELQATDALLAELRAQNSFESPLETEKRHRVLASLQTIADAFVKVVAKERE 71
Query: 129 LPKEQ--IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNML-KSR 185
P I + A + YGS LGV G SDID L +GP + T ED+F ++L K
Sbjct: 72 -PHNAVLIKDARAKVFAYGSLRLGVWGPGSDIDTLVVGPRYVTR-EDYFQHFPDLLVKMA 129
Query: 186 P--EVSEIHCVKDAKVPLMRFKFDGILIDLPY---ACLHVLSVPENVDVLNPFFLRDLDE 240
P ++++ V++A VP+++F++ GI IDL + A L L + + LR LDE
Sbjct: 130 PPGAITDLTVVEEAFVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNLLRGLDE 189
Query: 241 TSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAH 300
+S++G R IL LVP+ F+ LR IKLWA+RR +YGN+ GF GGV A+LVA
Sbjct: 190 KELRSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAWAMLVAR 249
Query: 301 VCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRS 348
VCQ +PK + + +V FF WPWP PV+L+ +P + Y ++
Sbjct: 250 VCQLYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRV----YKGDSYH 305
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKK 407
LMP+ P P N+TRS+ I+ E T ++M W +F ++K
Sbjct: 306 LMPVITPAYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTFFTKD 365
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ +++V ++ +++ W G+V+S+ R L+ LE + + P
Sbjct: 366 FKYYMQVISASRDKEAHKIWSGFVESKVRMLVQSLERHESIAVARP 411
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 209/392 (53%), Gaps = 23/392 (5%)
Query: 71 NPSV-LDQMDE-----ERSLSLVQLMTNEGLVPSTEEEDKRRNV-IQKLKEIVLAWVKRV 123
NP + +D+ D+ + S ++ ++ E TEEE K+++ +QKL+EI+L W+ +V
Sbjct: 22 NPHIPIDKKDQPPEALKISQKILNILEKEYNYSETEEEIKQKDKKVQKLREIILNWISQV 81
Query: 124 AWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
A ++++ + + +L +GSY L V+ SDIDA+C P F + FF L ++L
Sbjct: 82 AEEKQID----FKYNGDLLIFGSYKLKVNQKNSDIDAVCFVPSFVECKKHFFGDLFHILS 137
Query: 184 SRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSW 243
+ EV +I ++ VPL++ ++ GI D+ ++ ++D+ + L+ +DE S
Sbjct: 138 QKKEVEDIFSIQHTSVPLIKMRYFGIPFDISFSKQSQSQFKSDLDIKSIQILQGMDEKSI 197
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
++L+G R + Q + + + F+ L+CIKLWA+ R +Y N+ G+L G+ +ILVA +CQ
Sbjct: 198 RALNGYRVAEWFNQNIKNKDTFKKALKCIKLWAQNRCIYSNILGYLNGIAWSILVAKICQ 257
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVM--------LQDPMLPAAGYPSETRSL--MPIR 353
+P + ++ FF Y+ W W + + + M+ + E + + M I
Sbjct: 258 LYPNYFVYGIIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWVPENKGISNMMII 317
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR--PDFDWHFLFEPFPYSKKYARF 411
PC P C N+T ST I+ +F G+ ++ + +D+ LF+PF + K+Y F
Sbjct: 318 TPCFPCINCAYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQDLFKPFEFFKRYNAF 377
Query: 412 VRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+++ + A N+++ W G V+ R L +E
Sbjct: 378 LQIRILAKNKNEYFQWKGHVEINLRKLTKIIE 409
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 202/380 (53%), Gaps = 16/380 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SLV+ +T + + + E KR +VI+ L+ +V +V+RV Q+ + + I + T+
Sbjct: 30 SLVETLTRKNVFETPEGNKKRDDVIRHLQTVVEEFVRRVCKQKGVKQAAIDVAGGKVFTF 89
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFF----VVLHNMLKSRPEVSEIHCVKDAKVP 200
GSY LGVHG SDID+L + P+ ++ +DFF + M KS +++E++ V+DA VP
Sbjct: 90 GSYALGVHGPTSDIDSLVVVPKQVSI-DDFFRNFPSIFREMSKSE-DITELNPVEDAFVP 147
Query: 201 LMRFKFDGILIDLPYACLHVLS-VPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLV 259
+++ ++ G+ +DL +A L LS VP +++ + L L E + +S++G R K +L V
Sbjct: 148 IIKMEYRGVSLDLIFASLPKLSSVPRDMETIEKKNLDGLAEQAMRSVNGTRVTKELLAAV 207
Query: 260 PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFK 319
P F+ LR IKLW+ RG+YG + G+ GGV AI+VA +CQ +P + T+V+ FF
Sbjct: 208 PHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAWAIMVARICQLYPFANGATIVSKFFS 267
Query: 320 TYAYWPWPTPVMLQDPMLPAAG--------YPSETRSLMPIRLPCSPHEYCHSNITRSTF 371
W WP PV+L+ A G Y + LMPI P P + ST
Sbjct: 268 LMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPIITPAFPSMCSTHTVMPSTL 327
Query: 372 YKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGW 430
++ EF R + + W LFE ++K + ++ + ++ Q+ + G
Sbjct: 328 RIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFTKDHKYYLTIVAASRTQEAHERFNGL 387
Query: 431 VKSRFRSLILKLEEVQGLCD 450
V+S+ R ++ +++ Q D
Sbjct: 388 VQSKVRHIVKGIDDGQTGID 407
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 162/279 (58%), Gaps = 10/279 (3%)
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
+ + V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR LD +SL+
Sbjct: 6 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 65
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+LVA CQ +P
Sbjct: 66 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 125
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPH 359
+ +TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P
Sbjct: 126 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 185
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
+ N++ ST + EF +G T ++++ DW L EP + +KY ++ + SAS
Sbjct: 186 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 245
Query: 420 NQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 246 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 284
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 174/316 (55%), Gaps = 18/316 (5%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
SF P + D + E +L+ + + + EE +RR + +L+EI W+K+ A
Sbjct: 891 SFKKPTEQDLKDSQELETTLAQLDIFE------TPEEITQRREALMRLQEISNKWIKQKA 944
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
++ LP T I T+GSY LGV+ +D+D+L + P F T E FF ++L
Sbjct: 945 VEQNLPPHVAKATTGKIFTFGSYRLGVNFKGADVDSLLVVPRFITRQE-FFSEFQSVLSE 1003
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL--NPFFLRDLDETS 242
P V +IH V DA VP+++ KF G+ IDL +A + +++ EN ++ +R++DE
Sbjct: 1004 NPHVEDIHAVVDAFVPVLKLKFMGVEIDLLFAQIDQMNIAENFNLCENTEVLMRNMDEHD 1063
Query: 243 WKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC 302
+S++GVR N+ IL LV + F+ L+ I+ WAKRR +Y N GFLGGV AILV+ +C
Sbjct: 1064 VRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVSWAILVSRIC 1123
Query: 303 QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDP-MLPAAGYP--------SETRSLMPIR 353
Q +P S + LV FFK ++ WPWP PV L++ +P+ P + LMPI
Sbjct: 1124 QLYPYASPSMLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHLMPIL 1183
Query: 354 LPCSPHEYCHSNITRS 369
P P + N+ RS
Sbjct: 1184 TPSYPSQNSAYNVQRS 1199
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 208/423 (49%), Gaps = 61/423 (14%)
Query: 81 ERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA-ETHA 139
E + +L + EG++ + E +R V+ KL E+V AWVK+ + + +E+ A + A
Sbjct: 2 EDTKALEAALEPEGVIDTDENMQQRCLVLSKLNELVQAWVKKASKEEYNFEEEAANQVDA 61
Query: 140 TILTYGSYGLGVHG----------------SESDIDALCLGPEFATMAEDFFVVLHNMLK 183
+ T+GSY LGV DID L P E FF + +LK
Sbjct: 62 RLFTFGSYRLGVQSRYDMSSIQLFQMQFSRDAGDIDTLLCFPHHIKR-ESFFGTFYQLLK 120
Query: 184 SRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETS- 242
P V+++H + A VP+++ DG+ +DL +A L V + + + + L+ + E
Sbjct: 121 ETPGVTDLHAAEGAFVPVIKLAMDGVELDLLFASLPVDRLEPTLSLQDVDLLKKIHEDEI 180
Query: 243 WKSLSGVRANKCILQLVP-DLEKFQPVLRCIKLWAKR-------------RGVYGNLHGF 288
+S++G R +L+++P +L+ F+ LR +KLWAK RGVY N+HG+
Sbjct: 181 MRSINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQTVRTSGRGVYSNVHGY 240
Query: 289 LGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW-----------------PW-PTPV 330
GG+HL ILV +CQ +P + +T++ FF+ Y+ W W +P+
Sbjct: 241 FGGIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSPI 300
Query: 331 MLQDPMLPAAGY--------PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
++D G P + LMPI P P + N+ ST ++I TEF RGH
Sbjct: 301 KIKDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRGH 360
Query: 383 NTTRDLMRPDFD--WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+D+MR + W ++EP + +Y FVRV SA+ + D ++ G V+S R L+L
Sbjct: 361 RVCQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVRHLVL 420
Query: 441 KLE 443
L+
Sbjct: 421 NLQ 423
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 164/282 (58%), Gaps = 10/282 (3%)
Query: 99 TEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDI 158
T++E K+R IV +V +V+ + L + I T+GSY LGVHG+ +DI
Sbjct: 43 TDKEAKQR--------IVKEFVYKVSKLQGLSESVARSAGGKIFTFGSYQLGVHGAGADI 94
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL 218
D LC+ P+ T E FF ++ NML PEV+E+ V +A VP++R F GI ID A L
Sbjct: 95 DTLCVFPQHVT-REHFFSIMFNMLNELPEVTELTSVVEAYVPVIRMHFSGIPIDFVCARL 153
Query: 219 HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKR 278
+ S+PE++D+ + L L+E +S+SG R IL+LVP + F+ LR IKLWAK+
Sbjct: 154 LLPSIPEDLDLSDDSLLVGLEEKCVRSVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKK 213
Query: 279 RGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLP 338
RG+Y N+ GFLGGV A+LVA VCQ +P ++V+ FF + W WP PV+L+ PM
Sbjct: 214 RGIYSNVMGFLGGVAWAMLVARVCQMYPNACTASIVSRFFHIMSKWEWPQPVLLK-PMEE 272
Query: 339 AAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
YP++ MPI P P N+T ST + EFL+
Sbjct: 273 GPIYPADKAHRMPIITPGFPSMCATHNVTNSTRSIMMNEFLK 314
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/465 (29%), Positives = 230/465 (49%), Gaps = 26/465 (5%)
Query: 72 PSVLDQMDE---ERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+ LD + E+S L+ + S E+ R + +L ++ +V+ Q+
Sbjct: 15 PATLDSSTKDSLEKSKILINFLKENDFFESEEDAKTRERALGRLSFLLKKFVR----QQS 70
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L K + + I T+GSY LGVH +DIDALC+ P + +DFF + +N L V
Sbjct: 71 LSKGETKDCGGIICTFGSYRLGVHDKGADIDALCVVPRHIS-RKDFFNIFYNQLLEDSNV 129
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V+DA VP+++ + I IDL A +++ V N+D+LN L+ +DE S++G
Sbjct: 130 TELSKVEDAYVPVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKTMDEKCILSING 189
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R +L L+P+ E F LR IK WAKRR +YGN +G+ GGV +I VA +CQ +P
Sbjct: 190 SRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSISVARICQLYPNK 249
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPML---------PAAGYPSETRSLMPIRLPCSPH 359
S +V +F+ Y+ W WP P++L+ P++ YP++ MPI P P
Sbjct: 250 SSYDIVCKYFEYYSNWTWPEPILLK-PIVDHHYNLKVWDNQKYPADRYHKMPIITPAYPS 308
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
N+ +STF I EF R + + D+ +F+ + +KY ++ + + A
Sbjct: 309 MCSTHNVFQSTFDLICREFRRSTEIINNSINST-DFLQIFDNTDFFRKYKLYINIKVKA- 366
Query: 420 NQDDLGDWVGWVKSRFRSLILKLEEVQGLCD--PNPTEYIDVDVTEPHIVFYWGLQPGRT 477
+++ + W G+V+S+ R L K E V+ + P P +I + F+ G++ +T
Sbjct: 367 DKESIKSWSGFVESKVRILCSKFEAVESIVAAIPFPKPFIKDETCN----FFIGIEILKT 422
Query: 478 NLLDIVAVEKDFLKNIHNGFQGSPGRMGLLVVQASQLSKSSQLDF 522
+ +K + G+ ++ ++ S K S F
Sbjct: 423 GSQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF 467
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 206/399 (51%), Gaps = 27/399 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+N + + D RS L+ ++ L + +R V+ +L IV+ WV V ++
Sbjct: 199 PVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEVGMEQG 258
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L +++ + I T+GSY LGV SDID LC+ P + + FF +L+ L+ V
Sbjct: 259 LDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSR-DAFFKILYAKLQQDARV 317
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSWKSLS 247
S++ V DA P+++F FDG+ IDL +A L + +P + + L N LR +DE + +S++
Sbjct: 318 SKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVN 377
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP+ E F+ LR +K WAK RG+Y N+ G+LGGV AILVA CQ +P
Sbjct: 378 GSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPN 437
Query: 308 GSLNTLVANFFKTYAYWPWP-TPVML-QDPMLPAAGYPS-----------ETRSLMPIRL 354
+ + LV FF Y+ W W +PV+L + A G + + L+PI
Sbjct: 438 FAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIIT 497
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL----MRPDFDW----HFLFEPFPYSK 406
P P N++ ST I EF N R + + W H + +P ++
Sbjct: 498 PAFPSMNSTHNVSLSTKRVITEEF---ANAKRIFDIWDKKKEISWTEALHLVLKPLDFT- 553
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
+ F+ + + A N+ W+GWV+S+ R L+ +LE +
Sbjct: 554 SFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERL 592
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 195/404 (48%), Gaps = 36/404 (8%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAET 137
+EE ++SLV G+ P EE ++RR+V++ + IV AW++ R+P E +
Sbjct: 23 EEEHNVSLVDWCV-AGIEPE-EEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQV 80
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I GSY VH S SDID + + P T E FF L L+ P ++E+HC++DA
Sbjct: 81 EGRIFATGSYRYNVHASGSDIDIVLIAPNRITR-EHFFNTLAPRLQHEPRITELHCIRDA 139
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
+VPL+ DGI IDL + + VPE V+ L+ LD+ S S + VR I+
Sbjct: 140 RVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMD 196
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IK W K RG+Y N GF G+ AILVA VCQ HP + +V F
Sbjct: 197 LVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRF 256
Query: 318 FKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPH 359
F+ Y W P P + L + M L P E++S L P+ P P+
Sbjct: 257 FRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPY 316
Query: 360 EYCHSNITRSTFYKIRTEFLRGHN-------TTRDLMRPDFD----WHFLFEPFPYSKKY 408
N+T + ++ TEF RGH T+ + + F W L EP + ++
Sbjct: 317 GNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEH 376
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPN 452
++ V +S ++ + +V V+SR R L E +G N
Sbjct: 377 KYYLHVLVSCTDAEAYQGYVDAVESRIRFLWAGTAESRGYALEN 420
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 206/399 (51%), Gaps = 27/399 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+N + + D RS L+ ++ L + +R V+ +L IV+ WV V ++
Sbjct: 218 PVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEVGMEQG 277
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L +++ + I T+GSY LGV SDID LC+ P + + FF +L+ L+ V
Sbjct: 278 LDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSR-DAFFKILYAKLQQDARV 336
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSWKSLS 247
S++ V DA P+++F FDG+ IDL +A L + +P + + L N LR +DE + +S++
Sbjct: 337 SKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVN 396
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP+ E F+ LR +K WAK RG+Y N+ G+LGGV AILVA CQ +P
Sbjct: 397 GSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPN 456
Query: 308 GSLNTLVANFFKTYAYWPWP-TPVML-QDPMLPAAGYPS-----------ETRSLMPIRL 354
+ + LV FF Y+ W W +PV+L + A G + + L+PI
Sbjct: 457 FAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIIT 516
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL----MRPDFDW----HFLFEPFPYSK 406
P P N++ ST I EF N R + + W H + +P ++
Sbjct: 517 PAFPSMNSTHNVSLSTKRVITEEF---ANAKRIFDIWDKKKEISWTEALHLVLKPLDFT- 572
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
+ F+ + + A N+ W+GWV+S+ R L+ +LE +
Sbjct: 573 SFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERL 611
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 206/399 (51%), Gaps = 27/399 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+N + + D RS L+ ++ L + +R V+ +L IV+ WV V ++
Sbjct: 229 PVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEVGMEQG 288
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L +++ + I T+GSY LGV SDID LC+ P + + FF +L+ L+ V
Sbjct: 289 LDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSR-DAFFKILYAKLQQDARV 347
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSWKSLS 247
S++ V DA P+++F FDG+ IDL +A L + +P + + L N LR +DE + +S++
Sbjct: 348 SKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVN 407
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP+ E F+ LR +K WAK RG+Y N+ G+LGGV AILVA CQ +P
Sbjct: 408 GSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPN 467
Query: 308 GSLNTLVANFFKTYAYWPWP-TPVML-QDPMLPAAGYPS-----------ETRSLMPIRL 354
+ + LV FF Y+ W W +PV+L + A G + + L+PI
Sbjct: 468 FAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIIT 527
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL----MRPDFDW----HFLFEPFPYSK 406
P P N++ ST I EF N R + + W H + +P ++
Sbjct: 528 PAFPSMNSTHNVSLSTKRVITEEF---ANAKRIFDIWDKKKEISWTEALHLVLKPLDFT- 583
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
+ F+ + + A N+ W+GWV+S+ R L+ +LE +
Sbjct: 584 SFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERL 622
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 197/381 (51%), Gaps = 14/381 (3%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ D ++ SL+ + +E + + E +R +V++ ++ +V +V+RV ++ + + I
Sbjct: 24 EQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVRRVGRKKGVQQPIIDA 83
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL---HNMLKSRPEVSEIHC 193
I T+GS+ LGVHG SDID L + P+F ++ +DFF + L ++ E
Sbjct: 84 AGGKIFTFGSFALGVHGPSSDIDTLVVAPKFVSI-DDFFALFPPTFRELCDEKDIQEFVP 142
Query: 194 VKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRAN 252
V+DA VP+++ ++ G+ IDL + L S+P + ++ L L E++ +S++G R
Sbjct: 143 VEDAFVPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTIDKKDLEGLSESATRSVNGTRVT 202
Query: 253 KCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT 312
+L VP F+ LR IKLW+ RRG+YG + G+ GGV AI+VA +CQ +P + T
Sbjct: 203 NELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLYPMANGAT 262
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAG--------YPSETRSLMPIRLPCSPHEYCHS 364
+V+ FF W WP PVML+ G Y + LMPI P P
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDD 423
+ ST ++ EF R +D+ DW LFE ++K + ++ V ++ ++
Sbjct: 323 TVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHTFFTKDHKYYLSVVAASRTKEA 382
Query: 424 LGDWVGWVKSRFRSLILKLEE 444
+ G V+S+ R +I +++
Sbjct: 383 NSTFSGLVQSKIRHIIKGIDD 403
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 214/448 (47%), Gaps = 28/448 (6%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
P+V D E +++ +T S E+ +KR ++ L+ ++ W+ V Q+ +
Sbjct: 26 GPTVADLKQNE---GMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQGMT 82
Query: 131 KEQIAE--THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
E + + + T+GS+ LG+ SDID LC+ P T E FF L L+ EV
Sbjct: 83 AENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTR-EAFFGSLVGKLQQMDEV 141
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V DA P+++ + IDL +A L++ S D+ + L++LD+ S + ++G
Sbjct: 142 ETVTPVPDAYAPIIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVNG 201
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP F+ LR IKLWAKRRG+Y N+ GF GG+ AILVA VCQ P
Sbjct: 202 TRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPNM 261
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDPMLPAA-------------GYPSETRSLMPIRLP 355
LV FF + W W PV L P+ ++ Y S+ LMP+ P
Sbjct: 262 QSVQLVRRFFLILSRWNWDNPVTLC-PIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITP 320
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY 415
P N+T +T I E R H T + DW L FP+ Y +V++
Sbjct: 321 AFPSMNSTYNVTETTKRIIMGEIERAHKLTLP-KKEQVDWELLCHKFPFFCNYLYYVQIR 379
Query: 416 LSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL--CDPNPTEY---IDVDVTEPHIVFYW 470
+SA + + G+V+SR R L+ LE G+ P P E +D +V E +Y
Sbjct: 380 VSALSSTAYRKYKGFVESRLRLLVRMLENTPGIKSVRPWPEEMPYVVDGEVRENSCCWYI 439
Query: 471 GLQ-PGRTNLLDIVAVEKDFLKNIHNGF 497
GL P +++ V D L+N +GF
Sbjct: 440 GLDFPKLSSMAAGQTVTCD-LRNCTSGF 466
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 191/376 (50%), Gaps = 38/376 (10%)
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG------- 153
E +KR+ + L+ + + ++K V+ ++ L + I + I TYGSY LGV+G
Sbjct: 46 ETEKRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDVSGGKIFTYGSYRLGVYGPAVMNGD 105
Query: 154 ----------SESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVP 200
+ SDID L + P+ M EDFF +L+ + + ++ V DA VP
Sbjct: 106 ISLMYSLRQFAGSDIDTLVVAPKH-VMREDFFAHFPTVLEKFAPKDAIEKMTPVPDAFVP 164
Query: 201 LMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP 260
+++ + GI IDL +A L V SVP N+D+ N LR LDE + ++G R IL+LVP
Sbjct: 165 IIKIEISGISIDLIFARLIVPSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVP 224
Query: 261 DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKT 320
+ F+ LR IKLWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+
Sbjct: 225 QQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRI 284
Query: 321 YAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITR 368
W WP PV+L+ +P + Y + LMPI P P NI+
Sbjct: 285 MNQWSWPQPVLLKHIEDGPLHMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNISM 340
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDW 427
ST I E RG + ++ W LF +S Y ++ + +++ ++ W
Sbjct: 341 STKAVILRELRRGGDMVDNIFVGQRRWSDLFARHSFFSGDYKYYLSINSTSTTKEAQAIW 400
Query: 428 VGWVKSRFRSLILKLE 443
G V+S+ R L+ L+
Sbjct: 401 SGLVESKLRHLVGALD 416
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 188/379 (49%), Gaps = 25/379 (6%)
Query: 96 VPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSE 155
+P+ E+ + I +L+ +V W++R + E + AT+L GS+ L V +E
Sbjct: 171 MPTAEQMSAKHLAINELQRVVDIWLRRTLDKLATDSETKSTETATLLLGGSWHLKVGNAE 230
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
SD+D + P T AE FF L L VS++ + A VP++ F+ + + IDL +
Sbjct: 231 SDLDVVAFMPHTVT-AEIFFSSLCEHLGQESSVSDLVARRKAAVPVLSFQLNSVRIDLLF 289
Query: 216 A-CLHVLSVPENVDVL---NPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRC 271
A +VP+++ L + +R +D TS +SLS R IL+LVP+ ++ LR
Sbjct: 290 ARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRV 349
Query: 272 IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVM 331
I+LWA+RRG+Y N GFLGG+ AILV VCQ P+ S+ +LV FF A W WPTP++
Sbjct: 350 IRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPIL 409
Query: 332 LQDPMLPAAGYPSETR-------------SLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
+ P+ G ++ LMPI P P N+ ST +R EF
Sbjct: 410 VAH---PSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEF 466
Query: 379 LRGHNTTRDLMRPDF----DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
RG DL R W+ LF P +Y V + L A N++ L +W +V SR
Sbjct: 467 ARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASR 526
Query: 435 FRSLILKLEEVQGLCDPNP 453
R L+ L+ + +P
Sbjct: 527 TRKLVETLQHTPSISALHP 545
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 188/379 (49%), Gaps = 25/379 (6%)
Query: 96 VPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSE 155
+P+ E+ + I +L+ +V W++R + E + AT+L GS+ L V +E
Sbjct: 171 MPTAEQMSAKHLAINELQRVVDIWLRRTLDKLATDSETKSTETATLLLGGSWHLKVGNAE 230
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
SD+D + P T AE FF L L VS++ + A VP++ F+ + + IDL +
Sbjct: 231 SDLDVVAFMPHTVT-AEIFFSSLCEHLGQESSVSDLVARRKAAVPVLSFQLNSVRIDLLF 289
Query: 216 A-CLHVLSVPENVDVL---NPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRC 271
A +VP+++ L + +R +D TS +SLS R IL+LVP+ ++ LR
Sbjct: 290 ARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRV 349
Query: 272 IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVM 331
I+LWA+RRG+Y N GFLGG+ AILV VCQ P+ S+ +LV FF A W WPTP++
Sbjct: 350 IRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPIL 409
Query: 332 LQDPMLPAAGYPSETR-------------SLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
+ P+ G ++ LMPI P P N+ ST +R EF
Sbjct: 410 VAH---PSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEF 466
Query: 379 LRGHNTTRDLMRPDF----DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
RG DL R W+ LF P +Y V + L A N++ L +W +V SR
Sbjct: 467 ARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASR 526
Query: 435 FRSLILKLEEVQGLCDPNP 453
R L+ L+ + +P
Sbjct: 527 TRKLVETLQHTPSISALHP 545
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 195/404 (48%), Gaps = 36/404 (8%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAET 137
+EE ++SLV G+ P EE ++RR+V++ + IV AW++ R+P E +
Sbjct: 23 EEEHNVSLVDWCV-AGIEPE-EEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQV 80
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I GSY VH S SDID + + P T E FF L L+ P ++E+HC++DA
Sbjct: 81 EGRIFATGSYRYNVHASGSDIDIVLIAPNRITR-EHFFNTLAPRLQHEPRITELHCIRDA 139
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
+VPL+ DGI IDL + + VPE V+ L+ LD+ S S + VR I+
Sbjct: 140 RVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMD 196
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IK W K RG+Y N GF G+ AILVA VCQ HP + +V F
Sbjct: 197 LVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRF 256
Query: 318 FKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPH 359
F+ Y W P P + L + M L P E++S L P+ P P+
Sbjct: 257 FRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPY 316
Query: 360 EYCHSNITRSTFYKIRTEFLRGHN-------TTRDLMRPDFD----WHFLFEPFPYSKKY 408
N+T + ++ TEF RGH T+ + + F W L EP + ++
Sbjct: 317 GNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEH 376
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPN 452
++ V +S ++ + +V V+S+ R L E +G N
Sbjct: 377 KYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALEN 420
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 190/404 (47%), Gaps = 36/404 (8%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAET 137
+EE ++SLV G+ P EE ++RR+V++ + IV AW++ R+P E +
Sbjct: 23 EEEHNVSLVDWCV-AGIEPE-EEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQV 80
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I GSY VH S SDID + + P T E FF L L+ P ++E+HC++DA
Sbjct: 81 EGRIFATGSYRYNVHASGSDIDIVLIAPNRITR-EHFFNTLAPRLQHEPRITELHCIRDA 139
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
+VPL+ DGI IDL + + VPE V+ L+ LD+ S S + VR I+
Sbjct: 140 RVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMD 196
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IK W K RG+Y N GF G+ AILVA VCQ HP + +V F
Sbjct: 197 LVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRF 256
Query: 318 FKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPH 359
F+ Y W P P + L + M L P E++S L P+ P P+
Sbjct: 257 FRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPY 316
Query: 360 EYCHSNITRSTFYKIRTEFLRGH-----------NTTRDLMRPDFDWHFLFEPFPYSKKY 408
N+T + ++ EF RGH + P W L EP + Y
Sbjct: 317 GNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEEAKSRFGPHGIWSRLLEPVKFFGNY 376
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPN 452
++ V +S ++ + +V V+S+ R L E +G N
Sbjct: 377 KYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALEN 420
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 190/390 (48%), Gaps = 36/390 (9%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAET 137
+EE + LV+ G+ P EE ++RR+V++ + IV AW++ R+P E A+
Sbjct: 23 EEEHNAPLVEWCV-AGIEPE-EEANRRRSVLEHINCIVRAWIRSTMITEFRMPAEAAAQV 80
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I GSY VHGS SDID + + P T E FF L L P ++++HC++DA
Sbjct: 81 EGRIFATGSYRYNVHGSGSDIDIVLIAPNRITR-EHFFNTLAPRLSHEPRITKLHCIRDA 139
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
+VPL+ DGI IDL + + VPE V+ L+ LD+ S S + VR I+
Sbjct: 140 RVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMD 196
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IK W K RG+Y N GF G+ AILVA VCQ HP + +V F
Sbjct: 197 LVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRF 256
Query: 318 FKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPH 359
F+ Y W P P + L + M L P E++S L P+ P P+
Sbjct: 257 FRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGRCWDPRESKSDALALFPVLTPAVPY 316
Query: 360 EYCHSNITRSTFYKIRTEFLRGH-----------NTTRDLMRPDFDWHFLFEPFPYSKKY 408
N+T + ++ EF RGH N T++ P W + EP + +Y
Sbjct: 317 GNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNETKEKFGPHGLWSKILEPVKFFGEY 376
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
++ V ++ S+ + +V V+S+ R L
Sbjct: 377 KYYMHVQVTCSDAELYQGYVEAVESKIRFL 406
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 160/267 (59%), Gaps = 1/267 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDP 335
+TLV FF ++ W WP PV+L+ P
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQP 290
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 160/267 (59%), Gaps = 1/267 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRVLILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDP 335
+TLV FF ++ W WP PV+L+ P
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQP 290
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 206/404 (50%), Gaps = 16/404 (3%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
+ N F V S PL+ + + D E +L+ + + S EE KR +V+QKL
Sbjct: 1 MSESNGAQFGVSS---PLSTAPPSRQDTELGETLLTELKAQNNFESPEETAKRNSVLQKL 57
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
++++ V+ V ++ + E + E I TYGSY LGV+G SDID+L + P+ + +
Sbjct: 58 QKLLQKLVQDVGKKKGMSPELLKEAGGKIFTYGSYRLGVYGPGSDIDSLMVAPKHVSR-D 116
Query: 173 DFFVVLHNMLKS--RPE-VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDV 229
DFF + M+++ +PE ++E+ V A VP+++ K G+ IDL +A L S+P N+D+
Sbjct: 117 DFFERMPGMIRATFKPEEITEMVVVAAAAVPIIKTKLMGVDIDLIFANLQRDSIPTNLDL 176
Query: 230 LNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFL 289
+ LR LD+T K ++G R IL LVP F+ LR +KLWA++R VYG + +
Sbjct: 177 GDTNLLRGLDDTDLKCVNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYP 236
Query: 290 GGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY------- 342
GGV ++VA VCQ +P + +V FF W WP+P+ LQ G
Sbjct: 237 GGVAYGMIVARVCQLYPNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTT 296
Query: 343 -PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEP 401
P + R LMP+ P P IT ST ++ E RG ++ W LF
Sbjct: 297 NPGDKRHLMPVITPAYPCMNSTHTITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAK 356
Query: 402 FP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
+S Y ++ + +A +D W G V+SR + L+ +E+
Sbjct: 357 HTFFSDAYQHYICIITAARTKDAQQAWSGLVQSRVKRLLAGIEQ 400
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 160/267 (59%), Gaps = 1/267 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDP 335
+TLV FF ++ W WP PV+L+ P
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQP 290
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 209/410 (50%), Gaps = 15/410 (3%)
Query: 94 GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
G+ P+ EE+ +R I L E+V W K++ + E A I TYGSY L V+G
Sbjct: 13 GMYPTPEEKKEREKAISYLNEVVEKWGKKIYISKTGTSENTDVCAAKIFTYGSYRLDVYG 72
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
+ +DIDA C+ EDFF L+ LK+ P+V EI +K + P++ + I IDL
Sbjct: 73 NNADIDA-CVVTNSTIEREDFFNDLYEDLKNNPDVREIRQIKSVRAPILTMTYMKIDIDL 131
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP--DLEKFQPVLRC 271
+A ++P+ +D+L+ L ++DE S ++++G R I VP +E F+ ++R
Sbjct: 132 NFARTAHTTLPKEMDILSERILDEMDELSTRAINGRRNTDMINNFVPPHSVEAFKVIVRA 191
Query: 272 IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWP-TPV 330
IK+W+K+RG+YG ++ +L G+ + ILVA V + + L+ FF YA W W PV
Sbjct: 192 IKMWSKKRGIYGYVYSYLNGISIEILVAQVISENYQLDNVRLLEKFFHAYATWDWARNPV 251
Query: 331 MLQDPMLPAAGYPSETRSLM-PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
ML + P + M + P +P E N+TRS+ ++ E LRG +
Sbjct: 252 MLG----VSDDRPERKKEEMVQVITPAAPRENSMYNMTRSSLELLKREMLRGERIVKGYK 307
Query: 390 RPDF-DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
DW+ LF+ Y FV + S + L + +G +S+ + LEE++ +
Sbjct: 308 SEGGNDWNLLFKKRHCFCGYYIFVEFSVRGS-LESLENKIGMFESKIVRFVRSLEEMEEV 366
Query: 449 CDPN--PTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG 496
+ N P Y++V+ + +Y G+ + L+D+ A FL++++ G
Sbjct: 367 IEVNVIPEGYLEVENAVDY--YYVGMNVKKDLLVDVSAPLNAFLEDVNKG 414
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 203/403 (50%), Gaps = 16/403 (3%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSL----VQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAW 119
PS F + ++ + E + L ++ + E + + E +R VI+ ++++V +
Sbjct: 7 PSRQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEF 66
Query: 120 VKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATM--AEDFFVV 177
++RV Q+ + + I I T+GSY LGVHG SDID L + P+F + +FF
Sbjct: 67 IRRVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPP 126
Query: 178 LHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLR 236
+ + +++E V+DA VP+++ ++ + IDL +A L S+P N+D + L
Sbjct: 127 TFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLE 186
Query: 237 DLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAI 296
L E++ +S++G R +L VP F+ LR IKLW+ RRG+YG + G+ GGV AI
Sbjct: 187 GLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAI 246
Query: 297 LVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAG--------YPSETRS 348
+VA +CQ +P + T+V+ FF W WP PVML+ G Y +
Sbjct: 247 MVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAH 306
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKK 407
LMPI P P + ST ++ EF R + + DW+ LFE ++K
Sbjct: 307 LMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKD 366
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCD 450
+ ++ V ++ ++ + G V+S+ R ++ +++ Q D
Sbjct: 367 HKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGID 409
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 160/267 (59%), Gaps = 1/267 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 11 PISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 70
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 71 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 129
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 130 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 189
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 190 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 249
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQDP 335
+TLV FF ++ W WP PV+L+ P
Sbjct: 250 IASTLVHKFFLVFSKWEWPNPVLLKQP 276
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 203/403 (50%), Gaps = 16/403 (3%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSL----VQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAW 119
PS F + ++ + E + L ++ + E + + E +R VI+ ++++V +
Sbjct: 7 PSRQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEF 66
Query: 120 VKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATM--AEDFFVV 177
++RV Q+ + + I I T+GSY LGVHG SDID L + P+F + +FF
Sbjct: 67 IRRVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPP 126
Query: 178 LHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVLNPFFLR 236
+ + +++E V+DA VP+++ ++ + IDL +A L S+P N+D + L
Sbjct: 127 TFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLE 186
Query: 237 DLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAI 296
L E++ +S++G R +L VP F+ LR IKLW+ RRG+YG + G+ GGV AI
Sbjct: 187 GLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAI 246
Query: 297 LVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAG--------YPSETRS 348
+VA +CQ +P + T+V+ FF W WP PVML+ G Y +
Sbjct: 247 MVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAH 306
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKK 407
LMPI P P + ST ++ EF R + + DW+ LFE ++K
Sbjct: 307 LMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKD 366
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCD 450
+ ++ V ++ ++ + G V+S+ R ++ +++ Q D
Sbjct: 367 HKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGID 409
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + ++E + SL++ + +G S EE R V+ ++ +V +VK+V R
Sbjct: 7 PISTAESTEREKEVTESLMEELRQQGTFESEEEAQTRELVLGRVSALVKKFVKKVGMARG 66
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L + I T+GSY LGVHG SDID LC+ P+ EDFF V ML+
Sbjct: 67 LSEAAATAAGGKIFTFGSYRLGVHGPSSDIDTLCVVPKH-VQREDFFEVFEPMLREFEGA 125
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+E+ V +A VP++ GI +D A L + S+PE++ + + LR++DE +SL G
Sbjct: 126 TEVAGVPEAYVPIITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDERCVRSLGG 185
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP+++ F+ LRCIKLWA+RR +Y N++GF GGV A++VA +CQ +P
Sbjct: 186 SRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVARICQLYPNA 245
Query: 309 SLNTLVANFFKTYAYWPWPTPVMLQD 334
+V+ FF W WP PV+L+
Sbjct: 246 IAGAIVSRFFIIMYQWTWPQPVLLKQ 271
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 184/357 (51%), Gaps = 21/357 (5%)
Query: 100 EEEDK---RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
E+E K R ++ KL +V WV+ V+ + +P+ + I T+GSY L V+ +
Sbjct: 32 EDESKLNHRMEILSKLNTLVKQWVRNVSISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGT 91
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
+IDALC+ P +D+F +LK +PE V++A VP+++ KFDGI IDL +A
Sbjct: 92 NIDALCVAPR-NIERQDYFGSFFELLKKQPEY---RAVEEALVPVVKMKFDGIKIDLLFA 147
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L + +P+N D+ L++LD +SL+G RA IL+ VP+++ F+ LR IKLWA
Sbjct: 148 RLALKEIPDNFDLREDMLLKNLDPKLVRSLNGCRATDEILRPVPNIDNFRLALRSIKLWA 207
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM 336
K+ G+Y N G+ GGV +LVA CQ P T V FF + W WP PV L+ P
Sbjct: 208 KKHGIYSNSLGYFGGVSWGMLVARTCQ-LPNVVAATQVHKFFLVFLRWKWPQPVFLKRPD 266
Query: 337 LPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL 388
G+ + LM I P P + +++ ST + EF T ++
Sbjct: 267 TVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEI 326
Query: 389 MRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
M W LFE + KY F+ + ++++N DD + +S+ R LI LE +
Sbjct: 327 MLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNTDDHLE-----ESKIRYLIQNLERI 378
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 185/376 (49%), Gaps = 19/376 (5%)
Query: 96 VPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSE 155
+P+ E+ + VI +L+ IV W++R E + AT+L GS+ L V +E
Sbjct: 190 LPTPEQLSAKHLVINELQRIVDIWLRRTLDALEGATETKSTETATLLLGGSWHLKVGMAE 249
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
SD+D + P A +E FF L L VS++ + A VP++ F+ + +DL +
Sbjct: 250 SDLDVVAFMPH-AITSEIFFSSLCEHLGKEASVSDLVARRKAAVPVLSFQLSSVRVDLLF 308
Query: 216 A-CLHVLSVPENVDVL---NPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRC 271
A +VP+++ L + +R +D TS +SLS R IL+LVP+ F+ LR
Sbjct: 309 ARYAQKQAVPKHLPFLPGDDVQVMRGMDATSVRSLSVARVASLILELVPNASVFRSTLRV 368
Query: 272 IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVM 331
I+LWA+RRG+Y N G+LGG+ A+LV VCQ P+ S+ +LV FF A W WPTP++
Sbjct: 369 IRLWARRRGLYSNKAGYLGGISWALLVCFVCQMFPRASVASLVHRFFSVLASWRWPTPIL 428
Query: 332 LQDP----------MLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG 381
+ P A + LMPI P P N+ ST +R EF RG
Sbjct: 429 VAHPSNGGKVDNGVQWDPAHNIHDRAHLMPIITPGFPAVNTAVNVNLSTLRVLREEFARG 488
Query: 382 HNTTRDLMRPDF----DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
DL R W+ LF P +Y + + L A N++ L +W +V SR R
Sbjct: 489 QRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHIAIELRAPNEEALAEWSSFVASRTRK 548
Query: 438 LILKLEEVQGLCDPNP 453
L+ L+ + +P
Sbjct: 549 LVETLQHTPSVATLHP 564
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 192/382 (50%), Gaps = 16/382 (4%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET- 137
D + S + L+ + L + E + +R V++ L ++ +V+R A + + E A T
Sbjct: 28 DLKASEEITALLKSYNLFETDEGKQRRELVLEALNRLLQQFVRRQAKKNQGISESEANTI 87
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+LT+GSY LG+ +SDID LCL P+ T E FF + L +S++ V DA
Sbjct: 88 SGKLLTFGSYRLGIVAPDSDIDVLCLCPKCVTR-ESFFSDFYISLTKVEAISKLQAVPDA 146
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
P+++ + I ID+ +A L +V N++VL+ LR++++++ +S++G R IL
Sbjct: 147 YTPVIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMNDSTVRSINGCRVASFILD 206
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
VP+ F+ LR IKLWA RR +Y + G+LGGV AIL A VCQ +P N L+ F
Sbjct: 207 SVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPNYVPNQLIEKF 266
Query: 318 FKTYAYWPWPTPVML----QDPMLPA---------AGYPSETRSLMPIRLPCSPHEYCHS 364
F+ Y+ W W PV L Q P LP P + + LMPI P P
Sbjct: 267 FRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQHLMPIITPAFPSMNSTH 326
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRP-DFDWHFLFEPFPYSKKYARFVRVYLSASNQDD 423
N+T +T + E R + + P + + E Y F+ + + +++
Sbjct: 327 NVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEEDIFSSYKHFLIIEVYGASEHA 386
Query: 424 LGDWVGWVKSRFRSLILKLEEV 445
G W GW+ SR R LI KLE +
Sbjct: 387 HGKWEGWIGSRMRFLIKKLENL 408
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 194/401 (48%), Gaps = 36/401 (8%)
Query: 58 SPVFLVPSFNF--PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEI 115
S P+F P++ ++ D + SL + + + +EE +R V+ KL +
Sbjct: 2 SSTMSAPTFGISQPISMDFPNKKDLLLNKSLTETLKSFNCFEPSEETSQRVKVLNKLNFL 61
Query: 116 VLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF 175
V W+ + R +P + + ++ +GSY LGVH S SDID L L P T DF
Sbjct: 62 VKKWIHLLTITR-IPMD--VDAGGKLIAFGSYRLGVHSSGSDIDTLVLAPRHVTRL-DF- 116
Query: 176 VVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFL 235
+L N A VP+M FK+ GI IDL +A L + +VP+N+D+ + L
Sbjct: 117 -ILENFT--------------AFVPIMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNIL 161
Query: 236 RDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLA 295
++LD S +SL+G R + +L+ VP+ F LR +KLWAK G+Y N GF GG+ A
Sbjct: 162 KNLDPESVRSLNGCRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAWA 221
Query: 296 ILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML-------------QDPMLPAAGY 342
ILVA CQ +P + + L+ F ++ W WP+PV+L Q P Y
Sbjct: 222 ILVARTCQLYPNAAPSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNY 281
Query: 343 PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPF 402
++ LMPI P P + N++RST I+ E + + W L E
Sbjct: 282 -ADRLHLMPIITPSFPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLEET 340
Query: 403 PYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ KY + V ++A + + D+ G+ +SR R L+ LE
Sbjct: 341 NFFCKYRHLIAVSINAEKEKEDTDFAGFFESRIRQLVQLLE 381
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 189/390 (48%), Gaps = 36/390 (9%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAET 137
+E+ ++ LV+ G+ P EE ++RR+V++ + IV AW++ R+P E A+
Sbjct: 23 EEDHNVPLVEWCA-AGIEPE-EEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQV 80
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I GSY VHGS SDID + + P T E FF L L ++E+HC++DA
Sbjct: 81 EGRIFATGSYRYNVHGSGSDIDIVLIAPNRITR-EHFFNTLAPRLSHESRITELHCIRDA 139
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
+VPL+ DGI IDL + + VPE V+ L+ LD+ S S + VR I+
Sbjct: 140 RVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMD 196
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IK W K RG+Y N GF G+ AILVA VCQ HP + +V F
Sbjct: 197 LVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRF 256
Query: 318 FKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPH 359
F+ Y W P P + L + M L P E++S L P+ P P+
Sbjct: 257 FRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPY 316
Query: 360 EYCHSNITRSTFYKIRTEFLRGH-----------NTTRDLMRPDFDWHFLFEPFPYSKKY 408
N+T + ++ EF RGH T+ + P W + EP + +Y
Sbjct: 317 GNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEY 376
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
++ V ++ ++ + +V V+S+ R L
Sbjct: 377 KYYLHVQVTCTDAEAYQGYVDAVESKIRFL 406
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 164/315 (52%), Gaps = 19/315 (6%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
I T+GSY LGV+ ++IDALC+ P +D+F +LK +PEV+E V++
Sbjct: 8 GMIYTFGSYRLGVNHKRANIDALCVAPR-NIERQDYFGSFLELLKKQPEVTECRAVEEVL 66
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP ++ DGI IDL +A L + +P+N D+ L++LD +SL+ RA IL+L
Sbjct: 67 VPDVKMNLDGIKIDLLFARLALKEIPDNFDLCEDMLLKNLDPKLVRSLNRCRATDEILRL 126
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
VP+++ F+ LR KLWAK+ G+Y N G+ GGV A+LVA CQ P T V FF
Sbjct: 127 VPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQ-LPNVVAATQVHKFF 185
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHSNITRST 370
++ W W PV L+ P G+ LMPI P PH ST
Sbjct: 186 LVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYPH---------ST 236
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
+ EF RG T ++M W LFE + KY + + ++++N DDL +W
Sbjct: 237 RKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYIIVLLVTSNNTDDLLEWCEL 296
Query: 431 VKSRFRSLILKLEEV 445
V+S+ R LI LE +
Sbjct: 297 VESKIRYLIQNLERI 311
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 188/390 (48%), Gaps = 36/390 (9%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAET 137
+E+ ++ LV+ G+ P EE ++RR+V++ + IV AW++ R+P E A+
Sbjct: 23 EEDHNVPLVEWCA-AGIEPE-EEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQV 80
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I GSY VHGS SDID + + P T E FF L L ++E+HC++DA
Sbjct: 81 EGRIFATGSYRYNVHGSGSDIDIVLIAPNRITR-EHFFNTLAPRLSHESRITELHCIRDA 139
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
+VPL+ DGI IDL + + VPE V+ L+ LD+ S S + VR I+
Sbjct: 140 RVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMD 196
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
L P F+ LR IK W K RG+Y N GF G+ AILVA VCQ HP + +V F
Sbjct: 197 LAPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRF 256
Query: 318 FKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPH 359
F+ Y W P P + L + M L P E++S L P+ P P+
Sbjct: 257 FRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPY 316
Query: 360 EYCHSNITRSTFYKIRTEFLRGH-----------NTTRDLMRPDFDWHFLFEPFPYSKKY 408
N+T + ++ EF RGH T+ + P W + EP + +Y
Sbjct: 317 GNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEY 376
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
++ V ++ ++ + +V V+S+ R L
Sbjct: 377 KYYLHVQVTCTDAEAYQGYVDAVESKIRFL 406
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 187/380 (49%), Gaps = 41/380 (10%)
Query: 104 KRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATI--------LTYGSYGLGVHGSE 155
KR+ V++ L++++ W + + T+ + L++GSY L VH
Sbjct: 3 KRKRVLRDLEDMLCRWSDETFFAKNAALNDDDNTNRKVPPTSSPALLSFGSYRLSVHTPS 62
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
SDID L L P T +DFF L++ V E+H V A P+++F+ +G+ IDL +
Sbjct: 63 SDIDCLVLAPPHLTR-DDFFTTWVTALQNEARVKELHPVSGAYTPVIKFEIEGVKIDLIF 121
Query: 216 ACLH--VLSVPENVDVLNPFFLRD-----LDETSWKSLSGVRANKCILQLVPDLEK---- 264
A L+ ++ + +D + L D LDETS +S++GVR + +L + +K
Sbjct: 122 ARLNEPTINNHDELDEIKEMELDDTLLIGLDETSVRSINGVRVAQYLLSTLETTDKNRKN 181
Query: 265 ---------FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
F+ LR +K WA+ G+Y N+ GFLGGV+ AILV VC+ +P +TL+
Sbjct: 182 YDSATQVDNFRLTLRAVKEWARVHGLYSNVLGFLGGVNWAILVCWVCKRYPDAPASTLLQ 241
Query: 316 NFFKTYAYWPWPTPVMLQD------------PMLPAAGYPSETRSLMPIRLPCSPHEYCH 363
FFKT++ W WP PV+L P+ + + + LMPI PC P
Sbjct: 242 IFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSMNSS 301
Query: 364 SNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDD 423
N+ ++R EF R D+ W LFE + +++A +++V A+N+DD
Sbjct: 302 YNVGEPQLRRLRDEFARASKLCSDVAFGTKKWGVLFEWNEFFQQHANYLQVDTVATNEDD 361
Query: 424 LGDWVGWVKSRFRSLILKLE 443
W G ++R R LI LE
Sbjct: 362 FRAWFGLCEARMRLLIAGLE 381
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 165/294 (56%), Gaps = 10/294 (3%)
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
DFF + LK + EV ++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ +
Sbjct: 10 DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 69
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L++LD +SL+G R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV
Sbjct: 70 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 129
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPS 344
A+LVA CQ +P +TLV FF ++ W WP PV+L+ P LP PS
Sbjct: 130 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 189
Query: 345 ETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPY 404
+ LMPI P P + N++ ST + EF +G T +++ +W LFE +
Sbjct: 190 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNF 249
Query: 405 SKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+KY ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 250 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF 303
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 190/385 (49%), Gaps = 20/385 (5%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKR-VAWQRRLPKEQIAET 137
D + S L+ L+ + L + E + +R V++ L ++ +V+R V L ++
Sbjct: 28 DLKASQELIVLLKSYNLYETDEGKKRREEVLESLNRLLQQFVRRQVKINMGLTDQEANSV 87
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
A +LT+GSY LG+ +SDID CL P T E FF +N L ++++ V DA
Sbjct: 88 TAKLLTFGSYRLGIVAPDSDIDVACLCPRGIT-REAFFSDFYNTLTKVEGITKLQSVPDA 146
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
P+++ + I ID+ ++ L +V N+++L+ LR++ +++ +S++G R IL
Sbjct: 147 YTPVIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILRNMSDSNVRSINGCRVASFILD 206
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
VP F+ LR IKLWA RR +Y + G+LGGV AIL A VCQ +P + N L+ F
Sbjct: 207 SVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQMYPNFAPNRLIEKF 266
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYP--------------SETRSLMPIRLPCSPHEYCH 363
FK ++ W W PV L + +G P + + LMPI P P
Sbjct: 267 FKVFSMWNWIYPVTLC-KIKRESGVPGLMSFKVWDPTNSLQDRQHLMPIITPAFPSMNST 325
Query: 364 SNITRSTFYKIRTEFLRGHN--TTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ 421
N+T +T + E R T +L W + E KY F+ + + S++
Sbjct: 326 HNVTATTKRVVTEELSRAAQLLKTPNLTNTQL-WEMVLEEEDVFSKYKHFLVIEVYGSSE 384
Query: 422 DDLGDWVGWVKSRFRSLILKLEEVQ 446
W GW+ SR R LI KLE ++
Sbjct: 385 HAHNKWEGWIGSRMRFLIKKLETLE 409
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 204/436 (46%), Gaps = 59/436 (13%)
Query: 71 NPSVLD---QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR 127
+P LD + D ++ +V+L+ + L + + KR V+ + ++ +V ++ +
Sbjct: 85 DPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELSINQ 144
Query: 128 RLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE 187
+ +E+ E + + T+GSY LGV SDID + L P+ T E FF + L+
Sbjct: 145 GINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNIT-REIFFNEFYLKLQKDRN 203
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSWKSL 246
V ++ + + P+++F +D + IDL A L ++ + L N + L++LDE + +SL
Sbjct: 204 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSL 263
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP 306
+G+R IL VP+ + F+ LR IKLWAKRRG+Y N+ GFLGG+ A+L A +CQ +P
Sbjct: 264 NGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQIYP 323
Query: 307 KGSLNTLVANFFKTYAYWPWPTPVMLQD------------PMLPAAGYPSETRSLMPIRL 354
+++ L+ FF+ Y+ W W PV++Q+ + + +MPI
Sbjct: 324 NYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIIT 383
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL-MRPDFD------------------- 394
P P N+T T + EF R H+ + + PD D
Sbjct: 384 PAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGNAIN 443
Query: 395 ----------------------WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 432
W + EPF K Y F+ + + +N+ W GW++
Sbjct: 444 INNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIE 503
Query: 433 SRFRSLILKLEEVQGL 448
S+ R L KLE + L
Sbjct: 504 SKIRLLFKKLETINEL 519
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 212/463 (45%), Gaps = 66/463 (14%)
Query: 41 VINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTE 100
+IN N+ + + PV S ++P + D ++ +V+L+ + L + +
Sbjct: 68 IINDNVTENKKHEYGVSDPV----SLDYPT------EEDLKKGNDVVELLKSYNLFETEQ 117
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
KR V+ + ++ +V ++ + + +E+ E + + T+GSY LGV SDID
Sbjct: 118 ALKKREKVLGMINKLFHEFVIELSINQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDC 177
Query: 161 LCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHV 220
+ L P+ T E FF + L+ V ++ + + P+++F +D + IDL A L
Sbjct: 178 IFLAPQNIT-REIFFNEFYLKLQQDRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPY 236
Query: 221 LSVPENVDVL-NPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRR 279
++ + L N + L++LDE + +SL+G+R IL VP+ + F+ LR IKLWAKRR
Sbjct: 237 RTLKDCCYTLDNDYILKNLDEVTVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRR 296
Query: 280 GVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----- 334
G+Y N+ GFLGG+ A+L A +CQ +P +++ L+ FF+ Y+ W W PV++Q+
Sbjct: 297 GIYSNILGFLGGISWALLTAKICQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYN 356
Query: 335 -------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRD 387
+ + +MPI P P N+T T + EF R H+
Sbjct: 357 IEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINY 416
Query: 388 L-MRPDFD-----------------------------------------WHFLFEPFPYS 405
+ PD D W + EPF
Sbjct: 417 MDSNPDADISQVMEHVNNLMSHGNAININNVGKSGDNENVNIHNNNSSIWSCIIEPFDLF 476
Query: 406 KKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL 448
K Y F+ + + +N+ W GW++S+ R L KLE + L
Sbjct: 477 KTYKHFLHIQIMGTNELIYNLWKGWIESKIRLLFKKLETINEL 519
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 198/406 (48%), Gaps = 34/406 (8%)
Query: 53 LVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKL 112
L P P++L P+ +F D + + SL++ + +P + + R I++L
Sbjct: 153 LHPVVQPLYLGPTSDF----------DVQNTHSLLRYFHSIAKLPRSSDLSHRHLAIEEL 202
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATM-- 170
+ +V W+ V P +IA + GS+ L S+SD+D + P F T+
Sbjct: 203 QRVVDLWL--VQKFPEYPDSKIA-----LFLGGSWHLKAGFSDSDLDIVAFAPNFVTLDC 255
Query: 171 -AEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDV 229
D +V L N+ S+ ++++ +K A VP++ FK +G+ ID A L VP ++ +
Sbjct: 256 FLTDLYVYLSNLPNSK--ITKLVAMKKATVPILAFKLNGVHIDFLLARSTELKVPTHLPI 313
Query: 230 LNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFL 289
L +D S +S+S R + +L+LVP F+ +R I+LWAKRRG+Y N GFL
Sbjct: 314 CCDEILSGMDSISIRSMSIARVSSLVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFL 373
Query: 290 GGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPS----- 344
GG+ +L +CQ P+ SL+ L+ FF ++ W WPTPV + P L A
Sbjct: 374 GGISWTLLAVFICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCP 433
Query: 345 -----ETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDF--DWHF 397
+ LMPI P P N+ R+T ++ EF RG ++ +W
Sbjct: 434 QTNHHDRAHLMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQN 493
Query: 398 LFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
LF P + +Y ++ + + A N++DL W ++ SR R L+ LE
Sbjct: 494 LFTPSEFLVRYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVESLE 539
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 186/390 (47%), Gaps = 36/390 (9%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAET 137
+EE + LV+ G+ P EE ++RR+V++ L IV AW++ R+P E A+
Sbjct: 23 EEEHNAPLVEWCV-AGIEPE-EEANRRRSVLEHLNCIVRAWIRSTMITEFRMPAEAAAQV 80
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
I GSY VH S SDID + + P T E FF L L V+E+HC++DA
Sbjct: 81 EGRIFATGSYRYNVHASGSDIDIVLIAPNRITR-EHFFDTLAPRLSHEARVTELHCIRDA 139
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
+VPL+ DGI IDL + + VPE V+ LR LD+ S S + VR I+
Sbjct: 140 RVPLIAMVVDGIDIDLSFGSIRQDRVPE---VITDDLLRGLDDQSVLSCNAVRVAHNIMD 196
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LR IK W K RG+Y N GF G+ AILVA V Q HP + +V F
Sbjct: 197 LVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVSQCHPNQNAAGMVVRF 256
Query: 318 FKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPH 359
F+ Y W P P + L + M L P E++S L P+ P P+
Sbjct: 257 FRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLGRCWDPRESKSDALALFPVLTPAVPY 316
Query: 360 EYCHSNITRSTFYKIRTEFLRGH-----------NTTRDLMRPDFDWHFLFEPFPYSKKY 408
N+T + ++ +EF RGH N TR W+ + EP +Y
Sbjct: 317 GNACYNVTITNLRQLCSEFARGHEICSSCIGMSVNDTRTKFGKYGLWNKILEPVKVFGEY 376
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
++ + ++ ++ + +V V+S+ R L
Sbjct: 377 RYYLHIQITCTDPEAYQGYVDAVESKIRFL 406
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 210/393 (53%), Gaps = 22/393 (5%)
Query: 69 PLNPSVL-DQMDEERSLSLVQLMTNEGLVPSTEE---EDKRRNVIQKLKEIVLAWVKRVA 124
PL+ + + Q DE+ S ++Q++ EG +E + K+ ++L+ I+ W++++
Sbjct: 24 PLDQNAIKSQQDEKESKQILQIL--EGEYKYSESEEEQQKKDEAAKQLRIIIKNWIQQIN 81
Query: 125 WQRRLPKEQIAETHA-TILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK 183
++QI H +L +GSY L V+ SDIDA+CL P + ++FF L ++L
Sbjct: 82 -----AEKQIENNHGGDLLFFGSYKLKVNSRGSDIDAVCLCPFYVEREKNFFGDLVHILS 136
Query: 184 SRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSW 243
+ E++E+ +++A VP+++ +F GIL DL +A + +D+ + L +DE S
Sbjct: 137 QKKEITELFPIQEASVPIIKMQFQGILFDLSFARAPTQFQSDKIDLTSNQMLLGMDERSC 196
Query: 244 KSLSGVRANKCILQL--VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
KS +G R + + + + + E FQ +L+CIKLWA+ RG+Y N+ G+L G+ ILV+ +
Sbjct: 197 KSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQNRGIYSNIIGYLSGIGWTILVSKI 256
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPT-PVMLQ-------DPMLPAAGYPSETRSLMPIR 353
CQ P SLN L+ FF Y+ W W PV ++ + L A + E +S M I
Sbjct: 257 CQLFPNYSLNQLLERFFFLYSRWRWQDFPVQVEYIVDDVANSKLSADQWRPEYKSSMMII 316
Query: 354 LPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVR 413
PC P C N++ +T I+ + G+ T + ++ LF+ F + KKY F+
Sbjct: 317 TPCFPCMNCAHNVSSTTLRIIQEQLWHGYETICKIQNGSKNYSDLFKSFKFFKKYKHFLE 376
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ 446
+ + A+N++D W G V+S R L E Q
Sbjct: 377 IKILATNKNDYTVWKGHVESGLRKLTRLFESPQ 409
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 203/414 (49%), Gaps = 51/414 (12%)
Query: 79 DEER-SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAW----VKRVAWQRRLPKEQ 133
DEER S SL+ + T L+ S + +R+ ++KL+ ++ W VK ++ K
Sbjct: 86 DEERLSSSLLDVCTARNLIESEDGTARRKKAMRKLQRMLQDWSGSLVKGKKAKKARAKAA 145
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
AET +L++GSY LGVH ++D+D L L P AT +DFF +LK + V ++H
Sbjct: 146 GAETPPILLSFGSYRLGVHTPDADVDCLVLAPRHATR-DDFFGSWVRILKQKKGVEDLHP 204
Query: 194 VKDAKVPLMRFKFDGILIDLPYACL--------HVLSVP------------ENVDVLNPF 233
V A P+++F DG+ IDL +A + H V VDV +
Sbjct: 205 VSSAYTPVIKFVMDGVKIDLIFASISNEVWLREHAQCVKSGDGGAEDGGSEREVDVDDSL 264
Query: 234 FLRDLDETSWKSLSGVRANKCILQLVPD---LEKFQPVLRCIKLWAKRRGVYGNLHGFLG 290
+ LDE S +S++GVR + +L + LE ++ LR +K WA+ +G+Y N+ G+LG
Sbjct: 265 LV-GLDEASVRSVNGVRVAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSNVLGYLG 323
Query: 291 GVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--------------DPM 336
GV+ AILV VC HP S L+ FF+T+A W WP PVML P+
Sbjct: 324 GVNWAILVCFVCIRHPDASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPV 383
Query: 337 LPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDF--- 393
+ +MPI PC P N+ ++R EF R +R+++
Sbjct: 384 WDPRENYRDKLHVMPIITPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGE 443
Query: 394 ----DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
W LFE + ++ ++RV ++A+ +D+ W G ++R R LI LE
Sbjct: 444 DGKKGWSSLFERSGFFGQHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGLE 497
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 196/390 (50%), Gaps = 38/390 (9%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
PS L + D +L+ + + + E +KR ++ ++ + + +VK V ++ L
Sbjct: 21 TPSELAEND-----NLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGLS 75
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS---RPE 187
+ I + I YGSY LGV+G SDID L +GP+ + EDFF+ L+ +
Sbjct: 76 QAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAI-EDFFLDFPPTLERMAPKDS 134
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
+ ++ V DA VP+++ + GI IDL +A L V S+P ++D+ N LR LDE + ++
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL+LVP+ + F+ LR IKLWA+ GV A+LVA VCQ +P+
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGVAWAMLVARVCQLYPQ 242
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLP 355
+ + +V FF+ YW WP PV+L+ +P + Y + LMPI P
Sbjct: 243 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKI----YHGDRFHLMPIITP 298
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRV 414
P N++ ST I E RG + + W LF +SK Y ++ +
Sbjct: 299 AYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNI 358
Query: 415 YLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
S+++++ W G V+++ R L++ L++
Sbjct: 359 TASSTSKEAQSVWSGLVEAKLRHLVIALDK 388
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 181/373 (48%), Gaps = 42/373 (11%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAETHATILTYGSYGLGVHGSESDI 158
EE ++RR+V++++ +V W++ R+P+ A+ I GSY VH S SDI
Sbjct: 45 EESNRRRSVLERIVNVVRVWIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSGSDI 104
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL 218
D + + P T E FF L LKS P V+++HC+++++VP++ DGI IDL + +
Sbjct: 105 DMVLIAPSRITR-EHFFNTLAPRLKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFGSI 163
Query: 219 HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKR 278
VPE V+ L+ LDE S S + VR I+ LVP+ F+ LR +K W K
Sbjct: 164 RQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKA 220
Query: 279 RGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP--------- 329
R +Y N GF G+ AIL A VCQ +P + +V FF+TY W P P
Sbjct: 221 RSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRA 280
Query: 330 VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
+ L + M L P E++S L P+ P P+ N+T + ++ EF R
Sbjct: 281 IYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQR 340
Query: 381 GHNTTRDLMRPDFD---------------WHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
GH DL+ D W + EP P+ K+ ++++ +S S+ +
Sbjct: 341 GH----DLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQ 396
Query: 426 DWVGWVKSRFRSL 438
+ V+SR R L
Sbjct: 397 AYADGVESRIRIL 409
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 180/373 (48%), Gaps = 42/373 (11%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAETHATILTYGSYGLGVHGSESDI 158
EE ++RR+V++++ +V W++ R+P+ A+ I GSY VH S SDI
Sbjct: 45 EESNRRRSVLERIVNVVRVWIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSGSDI 104
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL 218
D + + P T E FF L LK P V+E+HC+++++VP++ DGI IDL + +
Sbjct: 105 DMVLIAPSRITR-EHFFNTLAPRLKGEPWVTELHCIRESRVPIIAMVCDGIDIDLSFGSI 163
Query: 219 HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKR 278
VPE V+ L+ LDE S S + VR I+ LVP+ F+ LR +K W K
Sbjct: 164 RQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKA 220
Query: 279 RGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP--------- 329
R +Y N GF G+ AIL A VCQ +P + ++ FF+TY W P P
Sbjct: 221 RSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRA 280
Query: 330 VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
+ L + M L P E++S L P+ P P+ N+T + ++ EF R
Sbjct: 281 IYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQR 340
Query: 381 GHNTTRDLMRPDFD---------------WHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
GH DL+ D W + EP P+ K+ ++++ +S S+ +
Sbjct: 341 GH----DLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQ 396
Query: 426 DWVGWVKSRFRSL 438
+ V+SR R L
Sbjct: 397 AYADGVESRIRIL 409
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 181/373 (48%), Gaps = 42/373 (11%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAETHATILTYGSYGLGVHGSESDI 158
EE ++RR+V++++ +V W++ R+P+ A+ I GSY VH S SDI
Sbjct: 45 EESNRRRSVLERIVNVVRVWIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSGSDI 104
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL 218
D + + P T E FF L LKS P V+++HC+++++VP++ DGI IDL + +
Sbjct: 105 DMVLIAPSRITR-EHFFNTLAPRLKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFGSI 163
Query: 219 HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKR 278
VPE V+ L+ LDE S S + VR I+ LVP+ F+ LR +K W K
Sbjct: 164 RQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKA 220
Query: 279 RGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP--------- 329
R +Y N GF G+ AIL A VCQ +P + +V FF+TY W P P
Sbjct: 221 RSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRA 280
Query: 330 VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
+ L + M L P E++S L P+ P P+ N+T + ++ EF R
Sbjct: 281 IYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQR 340
Query: 381 GHNTTRDLMRPDFD---------------WHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
GH DL+ D W + EP P+ K+ ++++ +S S+ +
Sbjct: 341 GH----DLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQ 396
Query: 426 DWVGWVKSRFRSL 438
+ V+SR R L
Sbjct: 397 AYADGVESRIRIL 409
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 195/424 (45%), Gaps = 51/424 (12%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+N + + D S +LV + G+ S + R V+ +L+ I AW + W
Sbjct: 18 PINTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAIADAWCEN-EWALA 76
Query: 129 LPKEQI------------AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV 176
+ + A + T+GS L VH ++DID + + P T FF
Sbjct: 77 IAERACDGADCERALAASAPPRCELRTFGSVRLDVHTPDADIDVVLVAPRHCTR-RAFFD 135
Query: 177 VLHNMLKSRPEVSE--IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFF 234
L L+ + + V+DA P+++ + +DL +A L +PE +DV++
Sbjct: 136 TLVAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAPLACDELPEPLDVMDDAV 195
Query: 235 LRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHL 294
L LDE + +SL+G R + +L LVPD F+ LR +K WA+ +G+Y N+ G LGGV+
Sbjct: 196 LEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLGGVNC 255
Query: 295 AILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLP---------AAGY--- 342
AIL A VCQ +P + +T+V FF+ + W WP PV++ P P A+ Y
Sbjct: 256 AILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYAAW 315
Query: 343 -----PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR------- 390
P + L PI P P N+ I+ E +G TTR + +
Sbjct: 316 NPRLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHWRA 375
Query: 391 ---PDFD--------WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
P D W LF P + ++ +V+V +SA++ L W W +SR R+L+
Sbjct: 376 DESPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRNLV 435
Query: 440 LKLE 443
+ L+
Sbjct: 436 VALD 439
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQR-RLPKEQIAETHATILTYGSYGLGVHGSESDI 158
EE ++RR+V++++ +V W++ R+P+ A+ I GSY VH S SDI
Sbjct: 45 EESNRRRSVLERIVNVVRVWIRHTMIAEFRMPEAAAAQVEGRIFATGSYRYNVHTSGSDI 104
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL 218
D + + P T E FF L LK P V+E+HC+++++VP++ DGI IDL + +
Sbjct: 105 DMVLIAPSRITR-EHFFNTLAPRLKGEPWVTELHCIRESRVPIIAMVCDGIDIDLSFGSI 163
Query: 219 HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKR 278
VPE V+ L+ LDE S S + VR I+ LVP+ F+ LR +K W K
Sbjct: 164 RQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQALRFVKAWGKA 220
Query: 279 RGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP--------- 329
R +Y N GF G+ AIL A VCQ +P + ++ FF+TY W P P
Sbjct: 221 RSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRA 280
Query: 330 VMLQDPM-----LPAAGYPSETRS----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
+ L + M L P E++S L P+ P P+ N+T + ++ EF R
Sbjct: 281 IYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQR 340
Query: 381 GHNTTRDLMRPDFD---------------WHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
GH DL+ D W + EP P+ K+ ++ + +S S+ +
Sbjct: 341 GH----DLLSNDLGMSAVEAEAKFGPFGVWSRVLEPAPFFGKFRHYLHIKVSCSDAEHYQ 396
Query: 426 DWVGWVKSRFRSL 438
+ V+SR R L
Sbjct: 397 AYADGVESRIRIL 409
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 199/422 (47%), Gaps = 45/422 (10%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
S N+P + D +RS +V+L+ L KR NV+ + ++ ++ ++
Sbjct: 89 SLNYP------SEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
+ + +E+ + T+GSY LGV SDID + L P+ T E FF + L+
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLT-REIFFNEFYLKLQQ 201
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSW 243
V ++ + + P+++F +D + IDL A L ++ + L N L++LDE +
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G+R IL VP+ + F+ LR IKLWAK RG+Y N+ GFLGG+ A+L A +CQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQD------------PMLPAAGYPSETRSLMP 351
+P +++ L+ FFK Y+ W W PV+LQ+ P+ + +MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381
Query: 352 I---RLPC--SPHE--YCHSNITRSTFYKIRT--EFLRGHNTTRDLMRPD---------- 392
I PC S H YC NI F + + +++ N + +R +
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMNKLWPNNNVNN 441
Query: 393 ------FDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ 446
W + EP Y F+ + + N+ W GW++S+ R L KLE +
Sbjct: 442 INNSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLETIN 501
Query: 447 GL 448
L
Sbjct: 502 EL 503
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 144/253 (56%), Gaps = 5/253 (1%)
Query: 80 EERSLSLVQLMTNE----GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA 135
+E L L + +T G+ E +R V+ KL +V W++ V+ + +P I
Sbjct: 31 KEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNIPASVID 90
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK 195
I T+GSY LGVH +DIDALC+ P DFF + LK + EV ++ V+
Sbjct: 91 SVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVE 149
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP+++ FDGI ID+ +A L + ++PEN+D+ + L++LD +SL+G R I
Sbjct: 150 EAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEI 209
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
L LVP++E F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P TLV
Sbjct: 210 LHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVH 269
Query: 316 NFFKTYAYWPWPT 328
FF ++ P T
Sbjct: 270 KFFLVFSKCPSET 282
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 203/438 (46%), Gaps = 52/438 (11%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
S N+P + D +R+ +V+L+ + L + KR V+ + ++ +V ++
Sbjct: 102 SLNYPTDE------DLKRANDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVEIS 155
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
+ + +E H + T+GSY LGV SDID + L P+ T E FF + L+
Sbjct: 156 ISQGINEEDAKYIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNIT-REIFFNEFYLKLQQ 214
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSW 243
V ++ + + P+++F +D + IDL A L ++ + L N + L++LDE +
Sbjct: 215 DKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTV 274
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G+R IL VP + F+ LR IKLWAK RG+Y N+ GFLGG+ A+L A VCQ
Sbjct: 275 RSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKVCQ 334
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--------DPMLPAAGYPSETR-----SLM 350
+P +++ L+ FF+ Y+ W W PV++Q D + + + E +M
Sbjct: 335 LYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVM 394
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH------------------NTTRDLMRP- 391
PI P P N+T T + EF R H N ++ P
Sbjct: 395 PIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVTPV 454
Query: 392 -----------DFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
W + +P Y F+ + + A+N+ W GW++S+ R L
Sbjct: 455 STPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLLFK 514
Query: 441 KLEEVQGL-CDPNPTEYI 457
KLE + L P P Y+
Sbjct: 515 KLETINELRIRPYPKFYV 532
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 205/419 (48%), Gaps = 16/419 (3%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + + + P ++ +K+R I K+ E + W K++ + + ATI YG
Sbjct: 5 LKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKAATIYVYG 64
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY L V+G+ SDIDA C+ +DF+ L+ L + P+V E+ + + P +
Sbjct: 65 SYRLNVYGNNSDIDA-CIVSNSTITRDDFYDGLYAELLNNPDVKELKQIPSKRSPHLSMI 123
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD--LE 263
+ I DL ++ S+P+N+D+LN L+++DE ++++GVR I VP+ E
Sbjct: 124 YLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEE 183
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAY 323
F+ ++R IKLW K+RG+YG ++ FL G+ + ILVA V + + L+ FF+ Y+
Sbjct: 184 AFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSS 243
Query: 324 WPW-PTPVML--QDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
W W TPVML D + ++ I P SP E +IT+ + I+ E R
Sbjct: 244 WDWLRTPVMLGTNDDF-----NDKKKEGIIQILTPASPSENAAFSITKFSLEMIKRELKR 298
Query: 381 GHNTTRDLMRPDF-DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
G + DW LF+P Y F+ +++S+ + L +G +S +L+
Sbjct: 299 GQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNLM 358
Query: 440 LKLEEVQGLCDPN--PTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG 496
L E++ + + N P ++D + +Y G+ R +DI FL +++G
Sbjct: 359 KGLSEIEEIIEANVIPNGFLDEE--NERYFYYVGMNVKRDCPVDISTPLNSFLSIVNSG 415
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 205/419 (48%), Gaps = 16/419 (3%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + + + P ++ +K+R I K+ E + W K++ + + ATI YG
Sbjct: 5 LKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKAATIYVYG 64
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY L V+G+ SDIDA C+ +DF+ L+ L + P+V E+ + + P +
Sbjct: 65 SYRLNVYGNNSDIDA-CIVSNSTITRDDFYDGLYAELLNNPDVKELKQIPSKRSPHLSMI 123
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD--LE 263
+ I DL ++ S+P+N+D+LN L+++DE ++++GVR I VP+ E
Sbjct: 124 YLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEE 183
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAY 323
F+ ++R IKLW K+RG+YG ++ FL G+ + ILVA V + + L+ FF+ Y+
Sbjct: 184 AFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSS 243
Query: 324 WPW-PTPVML--QDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
W W TPVML D + ++ I P SP E +IT+ + I+ E R
Sbjct: 244 WDWLRTPVMLGTNDDF-----NDKKKEGVIQILTPASPSENAAFSITKFSLEMIKRELKR 298
Query: 381 GHNTTRDLMRPDF-DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
G + DW LF+P Y F+ +++S+ + L +G +S +L+
Sbjct: 299 GQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNLM 358
Query: 440 LKLEEVQGLCDPN--PTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG 496
L E++ + + N P ++D + +Y G+ R +DI FL +++G
Sbjct: 359 KGLSEIEEIIEANVIPNGFLDEE--NEKYFYYVGMNVKRDCPVDISTPLNSFLSIVNSG 415
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 152/256 (59%), Gaps = 1/256 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYW 324
+TLV FF ++ W
Sbjct: 264 IASTLVHKFFLVFSKW 279
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 152/256 (59%), Gaps = 1/256 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYW 324
+TLV FF ++ W
Sbjct: 264 IASTLVHKFFLVFSKW 279
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 152/256 (59%), Gaps = 1/256 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 309 SLNTLVANFFKTYAYW 324
+TLV FF ++ W
Sbjct: 264 IASTLVHKFFLVFSKW 279
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 204/419 (48%), Gaps = 16/419 (3%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + + + P ++ +K+R I K+ E + W K++ + + ATI YG
Sbjct: 5 LKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVRAATIYVYG 64
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY L V+G+ SDIDA C+ +DF+ L+ L + P+V E+ + + P +
Sbjct: 65 SYRLNVYGNNSDIDA-CIVSNSTITRDDFYDGLYAELLNNPDVKELKQIPSKRSPHLSMI 123
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD--LE 263
+ I DL ++ S+P+N+D+LN L+++DE ++++GVR I VP+ E
Sbjct: 124 YLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEE 183
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAY 323
F+ ++R IKLW K+RG+YG ++ FL G+ + ILVA V + + L+ FF+ Y+
Sbjct: 184 AFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSS 243
Query: 324 WPW-PTPVML--QDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
W W PVML D + ++ I P SP E +IT+ + I+ E R
Sbjct: 244 WDWLRAPVMLGTNDDF-----NDKKKEGVIQILTPASPSENAAFSITKFSLELIKRELKR 298
Query: 381 GHNTTRDLMRPDF-DWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
G + DW LF+P Y F+ +++S+ + L +G +S +L+
Sbjct: 299 GQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVNLM 358
Query: 440 LKLEEVQGLCDPN--PTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAVEKDFLKNIHNG 496
L E++ + + N P ++D + +Y G+ R +DI FL +++G
Sbjct: 359 KGLSEIEEIVEANVIPNGFLDEE--NEKYFYYVGMNVKRDCPVDISTPLNSFLSIVNSG 415
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 203/441 (46%), Gaps = 53/441 (12%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+ + + D +++ +V+L+ + L + + KR V+ + ++ +V ++ +
Sbjct: 98 PITLNYPTEEDLKKANDVVELLKSYNLFETEQALKKRERVLGMINKLFHEFVVEISISQG 157
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+ +E H + T+GSY LGV SDID + L P+ T E FF + L+ V
Sbjct: 158 INEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNIT-REIFFNEFYLKLQQDRNV 216
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSWKSLS 247
++ + + P+++F +D + IDL A L ++ + L N + L++LDE + +SL+
Sbjct: 217 RKLQSLPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSLN 276
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G+R IL VP + F+ LR IKLWAK RG+Y N+ GFLGG+ A+L A +CQ +P
Sbjct: 277 GIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPN 336
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQ--------DPMLPAAGYPSETR-----SLMPIRL 354
+++ L+ FF+ Y+ W W PV++Q D + + + E +MPI
Sbjct: 337 YNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIIT 396
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLRGH------------------NTTRDLMRP----- 391
P P N+T T + EF R H N ++ P
Sbjct: 397 PAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPVSAPT 456
Query: 392 --------------DFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
W + +P Y F+ + + A+N+ W GW++S+ R
Sbjct: 457 TSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIESKIRL 516
Query: 438 LILKLEEVQGL-CDPNPTEYI 457
L KLE + L P P Y+
Sbjct: 517 LFKKLETINELKIRPYPKFYV 537
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 196/409 (47%), Gaps = 27/409 (6%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
P P++ + + D E + L + N S+ KR V+ +++ +V W+ V
Sbjct: 35 PGVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDV 94
Query: 124 AWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV-VLHNML 182
+ ++ A +LT+GS+ LGV SDID L L P + +DFF + ML
Sbjct: 95 SAGE-------IQSKARVLTFGSFRLGVITPMSDIDTLVLLPN-SISRDDFFTDFVETML 146
Query: 183 KSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL--HVLSVPENVDVLNPFFLRDLDE 240
P V+E + V A VP+++ K+ GI +D+ AC+ HVLS +VD + + D+++
Sbjct: 147 NRSPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLS--GDVDSVQEELIYDVEK 204
Query: 241 TSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAH 300
KS++G+R +L LV D + F+ R IK WA++R +Y N G++GGV A++V
Sbjct: 205 RCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGR 264
Query: 301 VCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHE 360
VCQ +P S +V FF YA W W + +P Y S+ +MP+ P P
Sbjct: 265 VCQLYPNYSAKQIVERFFFVYARWQWTATRDYGNSNVPLRRYTSDRHHVMPVITPIFPTH 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMR----------PDFDWHFLFEPFPYSKKYAR 410
N+ S I E RG +LM + W L PFP+ + Y +
Sbjct: 325 NTTYNVQESNKRVIVREIKRGREIM-ELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQ 383
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG---LCDPNPTEY 456
F+ + +SA + + G V+SR R L+ LE G L P+P +
Sbjct: 384 FLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHPVMF 432
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 135/227 (59%), Gaps = 28/227 (12%)
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
S MPI LPC+P E+C SN+T+ TF KIR E +RG+ T++ R DF+W +LF PFPY+ K
Sbjct: 91 SFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATK 150
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIV 467
Y F+R+ L A ++L DW GWVKSRFR+LILKLE + CDP+ TE +D V EP IV
Sbjct: 151 YEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLESIGVECDPDSTEEVDHTVFEPSIV 210
Query: 468 FYWGLQPGRTNLLDIVAVEKDFLKNIHNG----FQGSPGRMGLLVVQASQLSKSSQLDFG 523
+WGL + +DI ++ +DF+K++ N +G+ ++ + +V++SQL KS
Sbjct: 211 CHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPKS------ 264
Query: 524 SGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGYVDAKADSKYPSAGG 570
L VY+ ++P Y++GY + + Y A G
Sbjct: 265 ---------------LYSHSVYTPYIPQYMLGY---QTPTDYSGAAG 293
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 190/397 (47%), Gaps = 24/397 (6%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
P P++ + + D E + L + N S+ KR V+ +++ +V W+ V
Sbjct: 35 PGVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDV 94
Query: 124 AWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFV-VLHNML 182
+ ++ A +LT+GS+ LGV SDID L L P + +DFF + ML
Sbjct: 95 SAGE-------IQSKARVLTFGSFRLGVITPMSDIDTLVLLPN-SISRDDFFTDFVETML 146
Query: 183 KSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL--HVLSVPENVDVLNPFFLRDLDE 240
P V+E + V A VP+++ K+ GI +D+ AC+ HVLS +VD + + D+++
Sbjct: 147 NRSPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLS--GDVDSVQEELIYDVEK 204
Query: 241 TSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAH 300
KS++G+R +L LV D + F+ R IK WA++R +Y N G++GGV A++V
Sbjct: 205 RCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGR 264
Query: 301 VCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHE 360
VCQ +P S +V FF YA W W + P Y S+ +MP+ P P
Sbjct: 265 VCQLYPNYSAKQIVERFFFVYARWQWTATRDYGNSNAPRRRYTSDRHHVMPVITPIFPTH 324
Query: 361 YCHSNITRSTFYKIRTEFLRGHNTTRDLMR----------PDFDWHFLFEPFPYSKKYAR 410
N+ S I E RG +LM + W L PFP+ + Y +
Sbjct: 325 NTTYNVQESNKRVIVREIKRGREIM-ELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQ 383
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQG 447
F+ + +SA + + G V+SR R L+ LE G
Sbjct: 384 FLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCG 420
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 201/438 (45%), Gaps = 52/438 (11%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
S N+P + D + +V+L+ + L + KR V+ + ++ +V ++
Sbjct: 97 SLNYPT------EEDLRKGNDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVEIS 150
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
+ + +E H + T+GSY LGV SDID + L P+ T E FF + L+
Sbjct: 151 ISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNIT-REIFFNEFYLKLQQ 209
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSW 243
V ++ + + P+++F +D + IDL A L ++ + L N + L++LDE +
Sbjct: 210 DKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTV 269
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G+R IL VP + F+ LR IKLWAK RG+Y N+ GFLGG+ A+L A +CQ
Sbjct: 270 RSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 329
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQ--------DPMLPAAGYPSETR-----SLM 350
+P +++ L+ FF+ Y+ W W PV++Q D + + + E +M
Sbjct: 330 LYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLHVM 389
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDL-MRPDFD--------------- 394
PI P P N+T T + EF R H + M P +
Sbjct: 390 PIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVTPV 449
Query: 395 --------------WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
W + +P Y F+ + + A+++ W GW++S+ R L
Sbjct: 450 SAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLLFK 509
Query: 441 KLEEVQGL-CDPNPTEYI 457
KLE + L P P Y+
Sbjct: 510 KLETINELKIRPYPKFYV 527
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 162/273 (59%), Gaps = 8/273 (2%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ ++ + ++ + +L Q + +G S +E +KR+ V+++L++I +V+R A Q+
Sbjct: 11 PISTTLPTEPEKRLNHALHQELRAQGTFESPQETEKRKEVLRQLEKITTVFVQRAAAQKE 70
Query: 129 LPKEQ--IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
PK I + + TYGSY LGV+G SD+D L + P++ T+ + F + +++ P
Sbjct: 71 -PKNTFMIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFEIFPEVLVEMAP 129
Query: 187 --EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS-VPE--NVDVLNPFFLRDLDET 241
++++ V +A VP+++F+F GI IDL + + L +P+ N + + LR L E
Sbjct: 130 PGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLLRGLSEN 189
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+SL+G R IL LVP+ F+ LR IKLWA+R+ +Y N+ G+ GGV A+LVA V
Sbjct: 190 EVRSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARV 249
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD 334
CQ +PK + +V FF WPWP PV+L+D
Sbjct: 250 CQLYPKATSAVVVNKFFHIMFKWPWPLPVLLKD 282
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 194/448 (43%), Gaps = 66/448 (14%)
Query: 41 VINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTE 100
V+ + P+ +V +SP SF L V + V L ++EG+
Sbjct: 9 VVGGRTVQPALPIVDGSSPTPAELSFQSTLQKFVD---------ANVSLESSEGI----- 54
Query: 101 EEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDA 160
R V+ ++ + WV+ VA +R L + + T GSY LGVH +DID
Sbjct: 55 --KTRERVLVQMGRLHREWVRSVAIKRGLSPDAADSAGGELYTSGSYRLGVHEPGADIDT 112
Query: 161 LCLGPEFATMAEDFFVV-------------------------LHNMLKSRPEVSEIHCVK 195
+ + P F + +DFF L ++ +P V+ V+
Sbjct: 113 IAVAPSFCSR-DDFFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQPHVTNFVPVE 171
Query: 196 DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+A VP++ F ++GI IDL +A L S+P N D+ N L +D + KSL+G R I
Sbjct: 172 NAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKSLNGPRVTNLI 231
Query: 256 LQLVPDLEK----FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLN 311
LV E+ F V+R ++ WAK RG+Y N G+ GGV++ + VA V Q +P
Sbjct: 232 AALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALVLQLYPNACPA 291
Query: 312 TLVANFFKTYAYWPWPTPVMLQDPMLPAAG-------YPSETRSLMPIRLPCSPHEYCHS 364
+ + FF + W WP PVML P G + R + P+ P P
Sbjct: 292 SALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQAANMRQVAPMITPAYPAMNSTL 351
Query: 365 NITRSTFYKIRTEFLRGHNTT----RDLMRPDFD---------WHFLFEPFPYSKKYARF 411
+++R T + EF RGH +D R D W LFEP + Y +
Sbjct: 352 SVSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPADVESGGMWGELFEPSDFFIAYPYY 411
Query: 412 VRVYLSASNQDDLGDWVGWVKSRFRSLI 439
+ + ++ D W G+V+SR R L+
Sbjct: 412 LSLCITGPTLHDAQAWAGFVESRLRKLV 439
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 177/362 (48%), Gaps = 15/362 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L+ + + L E + K +++ L +IV W ++ A ++R+ ++ + A +L YG
Sbjct: 50 LLSFIETDSLQAIEENQQKSKDIQAYLGQIVKRWSQQCAKEKRINEDHLKYCSAVLLPYG 109
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
S LGV S+SDID +C+ PEF E FF L +L + + +I+ ++ P+++
Sbjct: 110 SVLLGVADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKIESTSNPIIKMI 169
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDL---DETSWKSLSGVRANKCILQLVPDL 262
+ G ID+ +A L+ VPEN+D R+L ++ S +L+G + I + +PD
Sbjct: 170 YKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSMYALNGRKNGILISKSMPDH 229
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA 322
+F LR IK WAK+R V N+ G+LGG+ AIL+A +CQ P+ L V+ FF+ Y+
Sbjct: 230 SQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDLCQTVSLFFQIYS 289
Query: 323 YWPWPTPVMLQDPMLPAAGY-----PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
W W PV++ + Y +M I P P + + TF I E
Sbjct: 290 QWNWKVPVVIDESEQEIICYYLQDEDKRNDKIMQIITPAYPFFNTTFKVHKITFQTIFQE 349
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
F G DW+ + PF + + FV + + + ++ W G+ +++
Sbjct: 350 FQIGAQKLG-------DWNEVLRPFDFFDCFQYFVALSIVSKTSENFHKWTGFCEAQLPK 402
Query: 438 LI 439
L+
Sbjct: 403 LL 404
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 36/343 (10%)
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GS +GV ++SD+DALC+GP+ + + FF+ L L+ ++ V DAKVP+++
Sbjct: 782 GSCQMGVQTADSDVDALCVGPDTMSCSR-FFMELRVALEKTKKLQSAREVHDAKVPVLKL 840
Query: 205 KFDGILIDL---PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
+ +G+ +DL PY ++ P +D + LR + +S+SG R IL+ VP+
Sbjct: 841 QINGVEVDLLYGPYPSSVPITPPSQIDDRS---LRKFEPAVLRSISGCRDGDAILRSVPN 897
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP-----------KGSL 310
+ FQ VLR +KLWAKRRG+Y N GFLGG ++LVA+VC+N G L
Sbjct: 898 VSHFQTVLRAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDL 957
Query: 311 NT---LVANFFKTYAYWPWPTPVMLQDPMLPAAGY--PSETRSLMPIRLPCSPHEYCHSN 365
+ L+A FF+ Y +W W PV + P + P MPI P P N
Sbjct: 958 SIEERLLAEFFEVYNHWDWQQPVAI----TPGSARYKPGHKSDKMPIVTPTPPFNNSARN 1013
Query: 366 ITRSTFYKIRTEFLRGHNTTR-DLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDL 424
+ RST +++ EF R + T+ + + L +P + K Y ++ V + + + D++
Sbjct: 1014 VARSTLTEMQQEFFRAFDITQASQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEV 1073
Query: 425 GDW-------VGWVKSRFRSLILKLEE-VQGLCDPNPTEYIDV 459
W +GW++SR +LI LE+ Q P P ++++
Sbjct: 1074 TKWPTNFSLSLGWLESRLIALIFDLEKNPQTYARPFPGTFVNL 1116
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 149/254 (58%), Gaps = 1/254 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 22 PISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 81
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 82 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 140
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 141 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL LVP+++ F+ LR IKLWA +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 309 SLNTLVANFFKTYA 322
+TLV FF ++
Sbjct: 261 IASTLVHKFFLVFS 274
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 210/435 (48%), Gaps = 42/435 (9%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
PSV D ++ L++ + G E +R ++ +++I+ W + + +
Sbjct: 37 GPSVADMKLNDK---LMETLKQLGAYEDKECNQRREQALENIEKIMKTWTCEICKTKNIS 93
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
+ + ++ +GSY LGVH +SDID LC+ PE +E F V + EV
Sbjct: 94 LD--FDCSCRVVPFGSYCLGVHSHDSDIDLLCIIPEVVNRSEFFSRVPAKL----AEVEG 147
Query: 191 IHCVK---DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDV-LNPFFLRDLDETSWKSL 246
I C+K DA VP+++F++ G IDL + S+P ++++ L+ LR D L
Sbjct: 148 ITCIKSLADAFVPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCL 207
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP 306
+G R +LQ VP++E F+ +LR IKLWA+RR +Y N+ GF GGV I+ A V Q +P
Sbjct: 208 NGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMAAQVAQLYP 267
Query: 307 KGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSE--------------TRSLMPI 352
K + L+ FF Y +W + +++ P A E +R + +
Sbjct: 268 KMCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFSRRPLTV 327
Query: 353 RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV 412
P P NIT S IR E R ++ T+ L + + ++ LFEP + K+Y FV
Sbjct: 328 ITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFV 387
Query: 413 RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ-GL-----CD----PNPTEYIDVDVT 462
++ + S + + + G+V+S+ R L+ KL Q GL C P P E++
Sbjct: 388 QIEVLGSEK-HIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGDP 446
Query: 463 E----PHIVFYWGLQ 473
E +I FY GL+
Sbjct: 447 EDGPWQNIFFYLGLK 461
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 154/297 (51%), Gaps = 18/297 (6%)
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
D F L+ +++R ++ ++ V++A+ P+++F+ D L A L+ ++PE+ DV +
Sbjct: 14 DMFDDLYVAMQAREDIKDLIKVQEARAPVIKFRMDDFEFKLSMARLNYATLPEDFDVTDD 73
Query: 233 FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L+++D S SL+ VR I LVP+L F+ ++ +K WAK+RGVY N GFLG +
Sbjct: 74 KHLKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKKRGVYNNGLGFLGSI 133
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML-------QDPMLPAAGYP-- 343
L I+ A +CQ +PK + L+ FF TY W WP PV L D LP GY
Sbjct: 134 SLEIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVANSHDLNLPVWGYGAT 193
Query: 344 --SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEP 401
S+ R LMPI PC P + + ++RST ++ F+R + + W LFEP
Sbjct: 194 EMSDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQIHEGKAGWCDLFEP 253
Query: 402 FPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYID 458
YA F+++ SA ++ D W G+ + ++I LE P Y+D
Sbjct: 254 VDLFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLERC-------PDAYLD 303
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 172/350 (49%), Gaps = 30/350 (8%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S E ++R+ + ++ + + +VK V+ ++ L + I I TYGSY LGV+G SD
Sbjct: 43 SPSETERRKQTLHLIQRVTVEFVKVVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSD 102
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
ID L +GP+ + EDFF +L+ + + ++ V DA VP+++ + GI IDL
Sbjct: 103 IDTLVVGPKHVSF-EDFFSDFPPLLEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLI 161
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
YA L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKL
Sbjct: 162 YARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKL 221
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD 334
WA+RR +Y N+ GF GGV A+LVA + P LQ
Sbjct: 222 WAQRRAIYSNIVGFPGGVAWAMLVARPIEEGP-------------------------LQM 256
Query: 335 PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFD 394
+ Y + LMPI P P N++ ST + E RG + +
Sbjct: 257 KVWNPKIYHGDRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLT 316
Query: 395 WHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
W+ LF +S+ Y ++ + S+ ++ W G V+S+ R L+ L+
Sbjct: 317 WNDLFTRHTFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALD 366
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 168/328 (51%), Gaps = 29/328 (8%)
Query: 122 RVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
R WQR + +T+L G G + ++IDALC+ P +D+F +
Sbjct: 9 RKCWQRS------SAERSTLL--GRTGWPLTTILTNIDALCVAPR-NIERQDYFGSFLEL 59
Query: 182 LKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDET 241
L+ +PEV+E V++ VP ++ FDGI IDL +A L + +P+N D+ L++LD
Sbjct: 60 LEKQPEVTECRAVEEMLVPDVKMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPK 119
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+SL+G RA IL+LVP+++ F+ LR KLWAK+ G+Y G+ GGV A+LVA
Sbjct: 120 LMRSLNGCRATDEILRLVPNIDNFRLALRSTKLWAKKHGIYSTSLGYFGGVSWAMLVART 179
Query: 302 CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ----DPMLPAAGYPSETRSLMPIRLPCS 357
CQ L +V F K P V L DP + G LMPI P
Sbjct: 180 CQ------LPNVVPVFLKR------PDTVNLGFQVWDPRVNVQGRF----DLMPIITPAY 223
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS 417
P + +++ ST + EF RG T ++M W LFE + KY F+ + ++
Sbjct: 224 PQQNSTFHVSSSTRKIMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLLVT 283
Query: 418 ASNQDDLGDWVGWVKSRFRSLILKLEEV 445
++N DDL +W G V+S+ R LI LE +
Sbjct: 284 SNNTDDLLEWCGLVESKIRYLIQNLERI 311
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 128/203 (63%), Gaps = 2/203 (0%)
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV ++
Sbjct: 19 IENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRA 77
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G R
Sbjct: 78 VEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTD 137
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TL
Sbjct: 138 EILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTL 197
Query: 314 VANFFKTYAYWPW-PTPVMLQDP 335
V FF ++ W W PTPV+L P
Sbjct: 198 VHKFFLVFSKWQWHPTPVLLVKP 220
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 219/466 (46%), Gaps = 53/466 (11%)
Query: 71 NPSVLD-QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL 129
PSV D Q++++ +L QL G E +R ++ +++I+ W + + +
Sbjct: 37 GPSVADMQLNDKLMETLKQL----GAYEDKECNKRREQALENIEKIMKTWTCEICKTKNI 92
Query: 130 PKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVS 189
+ + + +GSY LGVH +SDID LC+ PE +E F V + EV
Sbjct: 93 SLD--FDCSCRVAPFGSYCLGVHSHDSDIDLLCIIPEVVNRSEFFSRVPAKL----AEVE 146
Query: 190 EIHCVK---DAKVPLMRFKFDGILIDLPYACLHVLSVPENVDV-LNPFFLRDLDETSWKS 245
I C+K DA P+++F++ G IDL + S+P ++++ L+ LR D
Sbjct: 147 GITCIKSLADAFAPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITC 206
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH 305
L+G R +LQ VP++E F+ +LR IKLWA+RR +Y + GF GGV I+ A V Q +
Sbjct: 207 LNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMAAQVAQLY 266
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSE--------------TRSLMP 351
PK + L+ FF Y +W + +++ P A E +R +
Sbjct: 267 PKMCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFSRRPLT 326
Query: 352 IRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARF 411
+ P P + N+T S IR E R ++ T+ L + + ++ LFEP + K+Y F
Sbjct: 327 VITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTF 386
Query: 412 VRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ-GL-----C----DPNPTEYIDVDV 461
V++ + S + + + G+V+S+ R L+ KL Q GL C P P E++
Sbjct: 387 VQIEVLGSEK-HIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGD 445
Query: 462 TE----PHIVFYWGLQ---------PGRTNLLDIVAVEKDFLKNIH 494
E +I FY GL+ +D K+FL IH
Sbjct: 446 PEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFLLGIH 491
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 167/335 (49%), Gaps = 11/335 (3%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH-ATILTYGSYGLGVHGSESDI 158
E+E + +I K++EIV W+ + R EQ+A A +L +GSY LGV + D+
Sbjct: 165 EKEKLKEQIIMKIQEIVNQWMVNININERKIPEQVAHMQLARVLPFGSYFLGVSSVDGDV 224
Query: 159 DALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL 218
D +C+ P F + F L++M+ + V + V DAKVP+M+F+ G+ ID+ +A L
Sbjct: 225 DLVCIAPNFVDRFKHFNGQLYDMISNMDGVEYHNNVIDAKVPIMQFEIQGVPIDISFAQL 284
Query: 219 HVLSVPENVDVLNP-FFLRDLDETSWKSLSGVRANKCILQLVPD--------LEKFQPVL 269
V ++P+++D P L +DE S++G R N+ I++ V + ++FQ L
Sbjct: 285 DVETLPDDIDKQIPDTHLTMMDERDKLSINGYRCNQAIIRYVTEHSEDKQQSKQRFQESL 344
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP 329
+ IK+WA+ G+Y N G+LGG+ A+L+A +CQ P +N ++ FF Y+ W WPT
Sbjct: 345 KVIKIWARNNGIYENRLGYLGGISWALLLAKICQMFPNLEVNGIIEQFFLQYSSWKWPTM 404
Query: 330 VMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLM 389
+L P + M I P P + + I + + ++ +
Sbjct: 405 EVLLGPFSQPEERQKNQKFEMSIYTPAYPEYNSTERVKKINLEIIDYKIKEANRIIQEEI 464
Query: 390 RP-DFDWHFLFEPFPYSKKYARFVRVYLSASNQDD 423
+ W L + + KY +F+ + L +D+
Sbjct: 465 KTGQAPWDRLIQEEDFLNKYTKFIEIDLIRIERDE 499
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 178/370 (48%), Gaps = 48/370 (12%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
R+ + L+ + + ++K V+ ++ L + A I G SDID L +
Sbjct: 73 RKQTLHLLQRVTIEFIKVVSKEKGL-------SQAAIDASGG---------SDIDTLVVA 116
Query: 165 PEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL 221
P+ M EDFF +L+ + + ++ V DA VP+++ + GI IDL +A L V
Sbjct: 117 PKH-VMREDFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVS 175
Query: 222 SVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGV 281
SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA+RR +
Sbjct: 176 SVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAI 235
Query: 282 YGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPML- 337
Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L +D L
Sbjct: 236 YSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLH 295
Query: 338 -----PAAG------------------YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKI 374
P G Y + LMPI P P N++ ST I
Sbjct: 296 MKVWNPKVGSQLCFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVI 355
Query: 375 RTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKS 433
E RG + + W LF +S Y ++ + ++++++ W G V+S
Sbjct: 356 LRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVES 415
Query: 434 RFRSLILKLE 443
+ R L+ L+
Sbjct: 416 KLRHLVGALD 425
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 181/381 (47%), Gaps = 49/381 (12%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
R+ + L+ + + ++K V+ ++ L + A I G SDID L +
Sbjct: 73 RKQTLHLLQRVTIEFIKVVSKEKGL-------SQAAIDASGG---------SDIDTLVVA 116
Query: 165 PEFATMAEDFFVVLHNMLKS---RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVL 221
P+ M EDFF +L+ + + ++ V DA VP+++ + GI IDL +A L V
Sbjct: 117 PKH-VMREDFFAHFPAILEKHAPKDAIEKMTPVPDAFVPIIKIEIFGISIDLIFARLIVS 175
Query: 222 SVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGV 281
SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR IKLWA+RR +
Sbjct: 176 SVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAI 235
Query: 282 YGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPML- 337
Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L +D L
Sbjct: 236 YSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLH 295
Query: 338 -----PAAG-------------------YPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
P G Y + LMPI P P N++ ST
Sbjct: 296 MKVWNPKVGSQLCFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 355
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVK 432
I E RG + + W LF +S Y ++ + ++++++ W G V+
Sbjct: 356 ILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVE 415
Query: 433 SRFRSLILKLEEVQGLCDPNP 453
S+ R L+ L+ + +P
Sbjct: 416 SKLRHLVGALDRKSSIEIAHP 436
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 12/278 (4%)
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPY---ACLHVLSVPENVDVLNPFFLRDLDETSWK 244
++++ V DA VP+++F+F GI IDL + A + L N ++ + LR LDE +
Sbjct: 7 ITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELR 66
Query: 245 SLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN 304
S++G R I+ LVP+ F+ LR IKLWA+RR +YGN+ GF GGV A+LVA VCQ
Sbjct: 67 SVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQL 126
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLMPIRLPC 356
+P+ + + +V FF WPWP PV+L +D L A YP + LMPI P
Sbjct: 127 YPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPA 186
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVY 415
P NIT+S+ I E ++ + T +M W LF+ ++K + +++V
Sbjct: 187 YPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVI 246
Query: 416 LSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
++ +++ W G+V+S+ R L+ LE + + P
Sbjct: 247 AASKDKESHKLWSGFVESKVRLLVQGLERHESIAVARP 284
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 189/388 (48%), Gaps = 13/388 (3%)
Query: 68 FPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR 127
FP++ + D +R L + G+ EE R + KL +V W++ + +
Sbjct: 22 FPVSSAAPQGTDCKRLQRLTETXKPSGVSEEEEELQCRILIWGKLNNLVKEWIRGLNESK 81
Query: 128 RLP---KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
+LP E + ++ + L +D DALC P DFF + LK
Sbjct: 82 KLPXPVTENVGRNFFLLVNQCHHLLSGLTKGADTDALCAVPRHVNX-RDFFTSFYEKLKL 140
Query: 185 RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWK 244
+ EV ++ V++A VP+++ FDG ID+ +A L + ++PE++D+ + L+ LD +
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGTKIDILFARLALQTIPEDLDLXDDSLLKRLDIRCIR 200
Query: 245 SLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN 304
SL+G + IL LV +++ F+ LRCIKLWAK VY N+ GF+ GV A+L A CQ
Sbjct: 201 SLNGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAMLGARTCQL 260
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LP---AAGYPSETRSLMPIRLPC 356
+P +TLV FF ++ W P PV+++ P LP + PS+ PI P
Sbjct: 261 YPIAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPA 320
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P + + + ST + EF + T D + + LFE + +KY ++ +
Sbjct: 321 YPQQNSTYSASISTQMVVVEEFKXSLSIT-DXLLSKVEXSKLFEAPIFFQKYKDYIVLLA 379
Query: 417 SASNQDDLGDWVGWVKSRFRSLILKLEE 444
A + +WVG V+S+ LI LE+
Sbjct: 380 GAPTEKQRLEWVGLVESKIXILIGSLEK 407
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 133/226 (58%), Gaps = 9/226 (3%)
Query: 229 VLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGF 288
+L+ +LR LDE+S +S +GVR + ILQLVP+ E+F+ L +K WA+ RG+Y N+ GF
Sbjct: 1 MLDDRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGF 60
Query: 289 LGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPM-LPAAGYP- 343
LGGV+ AILVA +CQ +P +L++ FF+ Y W WP P+ML +P+ L +G+
Sbjct: 61 LGGVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNP 120
Query: 344 ----SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF 399
+ LMPI P P N+ ST + ++ EF +G N T ++ W LF
Sbjct: 121 KINVRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLF 180
Query: 400 EPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
+ ++ F+RV ++A+N +D W GWV+SR R L L+LE +
Sbjct: 181 IAPVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLEAL 226
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 158/337 (46%), Gaps = 34/337 (10%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
R V+ ++ E+ W++ V ++ L + + + T GSY LGVH +DID + +
Sbjct: 1 RERVLNRMGELCRDWIRTVCIKKGLSTDVVNVAGGQLFTSGSYRLGVHEPGADIDTILVS 60
Query: 165 PEFATMAEDFF-----------------VVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFD 207
P A DFF L +++ P+V+ V+ A VP++ F ++
Sbjct: 61 PN-ACQRMDFFGTTILSTVEGEEGTRDPTSLAERIRTHPDVTNFVPVESAAVPILTFDWE 119
Query: 208 GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDL----E 263
GI IDL +A L+ SVP + D+ N L D + KSL+G R I LV +
Sbjct: 120 GINIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLNGPRVTNLIAALVSGTPQRYQ 179
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAY 323
F V+RC++ WAK RG+Y N G+ GGV++ I VA V Q +P +L+ FF +
Sbjct: 180 VFLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQLYPNACGASLLRKFFLVFKT 239
Query: 324 WPWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
W WP P++L P G P + R + P+ P P ++R T ++ EF
Sbjct: 240 WRWPQPLLLTKPHDAGYGLPVWSVATAVRQVAPMITPAYPAMNSTLAVSRQTLQILQEEF 299
Query: 379 LRGHNTTRDLMR-------PDFDWHFLFEPFPYSKKY 408
RGH L + + +W+ LFEP + Y
Sbjct: 300 NRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 165/318 (51%), Gaps = 33/318 (10%)
Query: 229 VLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGF 288
+L+ LR +DE S +S +GVR + ILQLVP+ E+F+ L +K WA+ RG+Y N+ GF
Sbjct: 1 MLDDQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGF 60
Query: 289 LGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML---QDPM-LPAAGYP- 343
LGGV+ AILVA +CQ +P +L++ FF+ Y W WP P+ML +P+ L +G+
Sbjct: 61 LGGVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNP 120
Query: 344 ----SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF 399
+ LMPI P P N+ ST ++TEF RG + T ++ F W LF
Sbjct: 121 KINVRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLF 180
Query: 400 EPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL-CDPNPT--EY 456
+ ++ F+RV ++A + D W GWV+SR R L L+LE + + P ++
Sbjct: 181 VAPAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLEALSDIRIHPFARFFDF 240
Query: 457 IDVDVTEPHIV---------FYWGLQ---------PGRTNLLDIVAVEKDFLKNIHNGFQ 498
ID T P + GL+ G T+ +D+ +V +DF + ++
Sbjct: 241 IDTKDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDF-ATYTDQWE 299
Query: 499 GSPGRMGLLV--VQASQL 514
G G M + + V SQ+
Sbjct: 300 GRHGGMDMQIDHVTRSQI 317
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 127/210 (60%), Gaps = 9/210 (4%)
Query: 178 LHNMLKS-RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR 236
L+N++K +VSE V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + LR
Sbjct: 67 LNNLVKEWISDVSESKAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLR 126
Query: 237 DLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAI 296
LD +SL+G R IL LVP+ E F+ LR +KLWAKRRG+Y N+ GFLGGV A+
Sbjct: 127 SLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAM 186
Query: 297 LVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRS 348
LVA CQ +P + +TLV FF ++ W WP PV+L+ P LP PS+
Sbjct: 187 LVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYH 246
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
LMPI P P + N++ ST + EF
Sbjct: 247 LMPIITPAYPQQNSTYNVSTSTRTVMVEEF 276
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 174/355 (49%), Gaps = 38/355 (10%)
Query: 100 EEEDK---RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
E+E K R ++ KL +V WV+ V+ + +P+ + I T+GSY L V+ +
Sbjct: 212 EDESKLNHRMEILSKLNTLVKQWVRNVSISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGT 271
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
+IDALC+ P +D+F +LK +PE V++A VP+++ KFDGI IDL +A
Sbjct: 272 NIDALCVAPR-NIERQDYFGSFFELLKKQPEY---RAVEEALVPVVKMKFDGIKIDLLFA 327
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
L + +P+ D+ L++LD +SL+G RA IL+ VP+++ F+ L
Sbjct: 328 RLALKEIPDKFDLREDMLLKNLDPKLVRSLNGCRATDEILRPVPNIDNFRLAL------- 380
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLN----TLVANFFKTYAYWPWPTPVML 332
+ G+Y N G+ GGV A+LVA CQ LN T V F ++ W +
Sbjct: 381 -QHGIYSNSLGYFGGVSWAMLVARTCQ-----LLNVVAATQVHKCFLVFSRWKLRQNLGF 434
Query: 333 Q--DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMR 390
Q DP + G LM I P P + +++RST + EF RG T ++M
Sbjct: 435 QLWDPRVNVQG----QFHLMSIITPAYPQQNSTFHVSRSTRKVMLNEFNRGMQITDEIML 490
Query: 391 PDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
W L YS ++++N DD +W G V+S+ R LI LE +
Sbjct: 491 DKAGWDKLIATLSYS--------TLVTSNNTDDHLEWCGLVESKIRYLIQNLERI 537
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 140/257 (54%), Gaps = 4/257 (1%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV 123
P P++ +D + S L + M G+ S EE R ++ ++ +V W+K V
Sbjct: 8 PGITSPISLEGPKLVDLKLSEKLEEAMRPHGVFESEEEMSHRMEILNRINTLVRKWIKDV 67
Query: 124 AWQR---RLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHN 180
+ Q+ + +I + +GSY LG H +DID +C+ P + DFF
Sbjct: 68 SRQKSEINYLEYKINAFGGKVCIFGSYRLGAHTKGADIDTVCIAPGHVDRS-DFFSSFVE 126
Query: 181 MLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDE 240
+LK PEV ++ +++A VPL++ FDGI +D+ +A L + +P+ +D+ + LR L+
Sbjct: 127 VLKHTPEVKDLRAIEEAYVPLIKMTFDGIELDMVFARLTLPQIPDEIDLRDESLLRHLNT 186
Query: 241 TSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAH 300
+SL+G R IL LVP+ F+ L IK+WAK++G+Y + GFLGGV AILVA
Sbjct: 187 KCVRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWAILVAR 246
Query: 301 VCQNHPKGSLNTLVANF 317
VCQ +P + TL+ F
Sbjct: 247 VCQLYPNAAPATLLHKF 263
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 191/403 (47%), Gaps = 67/403 (16%)
Query: 107 NVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPE 166
V+++L +++ WVK V +R L +E IA T ++ GSY LG+ SDIDA+C+ P
Sbjct: 491 QVLKQLSDLLTKWVKMVGRERELSEEHIALTKGSLFLAGSYRLGLDDPNSDIDAVCVAPW 550
Query: 167 FATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPEN 226
T +DFF ++L+ P VS + V +A VPL+ F G+ +DL +A L V SV N
Sbjct: 551 HVTH-DDFFSSFCHLLEQTPGVSHLAPVPNAYVPLISLSFLGVRMDLLFARLPVSSVEPN 609
Query: 227 VDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLH 286
++ + L + ETS K+L+ R + +L LVP +++ VLR ++ WA+RRG+Y
Sbjct: 610 QNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKL 669
Query: 287 GFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGY---- 342
G+LGG+ AILVA VCQ +P + FF+ + W WP PVML M+ AG
Sbjct: 670 GYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLN--MIYDAGLGFDM 727
Query: 343 --PSET---RS-LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG--------------- 381
P ++ RS +MPI P PH +++ TF I E R
Sbjct: 728 WDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQPTFSVIYEELWRARYLAEIAVGISKPFP 787
Query: 382 ------HNTTRDLMR---------PDFD------------------------WHFLFEPF 402
++ DL P FD W LF+P
Sbjct: 788 TAAPSPESSEADLKAAVVCMATSMPSFDQPLNAVDSTEGVVQTTQGFGEGSAWDKLFQPS 847
Query: 403 PYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
+ +Y+ ++ A+++ + W +V+SR R L+ L +
Sbjct: 848 NFFIRYSSYMVFNFQAASESAMHKWGKFVQSRLRKLVDNLHHM 890
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S +E + R ++ KL +V WVK ++ + +P+ + I T+GSY LGVH +D
Sbjct: 62 SQDELNHRMEILAKLNTLVKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGAD 121
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
IDALC+ P D+F +LK +PEV+E V++A VP+++ FDGI IDL +A
Sbjct: 122 IDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFAR 180
Query: 218 LHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAK 277
L + +P++ D+ + LR+LD S +SL+G R IL LVP++E F+ LR IKLWAK
Sbjct: 181 LSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAK 240
Query: 278 RRGVYGNLHGFLGGV 292
+ G+Y N G+ GGV
Sbjct: 241 KHGIYSNSLGYFGGV 255
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 190/386 (49%), Gaps = 35/386 (9%)
Query: 93 EGLVPSTEEEDK--RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLG 150
+ L P EE K + +++ + + + W+K + ++ L +EQIA T + GSY LG
Sbjct: 278 DHLAPVETEETKPMKVRMLKSISDALNRWIKVLGYEVGLTQEQIAITQGALFLAGSYRLG 337
Query: 151 VHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGIL 210
+H +SDID +C P + DFF +L +V+E+ V +A VPL+ + I
Sbjct: 338 LHDPDSDIDVVCAVP-YHVSHRDFFCGFSAVLTRMTQVTELVTVPNASVPLISLSYQSIK 396
Query: 211 IDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 270
+DL +A L +LS+ ++D+ + L + S KSL+ R + IL LVP+ + F+ V R
Sbjct: 397 LDLLFAQLPLLSIGADLDIHSDHILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRVSR 456
Query: 271 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 330
I+ WA+RRG+Y + G+L G++ A+L A VCQ P +++ + +FF + W WP P+
Sbjct: 457 AIRAWARRRGIYSSKLGYLSGINWALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPKPI 516
Query: 331 MLQDPMLPAAGYPS------ETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHN- 383
ML P G + +MPI P P + +T ST I+ E R +
Sbjct: 517 MLNIPYDAKLGLECWSFQLRDRTHVMPIITPAYPQMNSSAQVTASTLSVIKEELWRARDL 576
Query: 384 ----------------TTRD----LMRPDFD----WHFLFEPFPYSKKYARFVRVYLSAS 419
TR L +PD D W L++P + +Y +V + +
Sbjct: 577 LEREILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLTIQI- 635
Query: 420 NQDDLGDWVGWVKSRFRSLILKLEEV 445
+ +LG W +V SR L+ L+++
Sbjct: 636 DSSELGRWETFVCSRLHKLVKMLQDL 661
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 22/342 (6%)
Query: 113 KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAE 172
++IV W ++ A ++R+ ++ + A +L YGS LGV S+SDID +C+ PEF E
Sbjct: 53 EKIVKKWSQQCAKEKRINEDHLKYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRRE 112
Query: 173 DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNP 232
FF L +L + + +I+ ++ P+++ + G ID+ +A L+ VPEN+D
Sbjct: 113 QFFNGLFYLLSNEQGMEQINKIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLD 172
Query: 233 FFLRDLDETSWKSLSGVRANK---CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFL 289
R+L ++ KSL + K I + +PD +F LR IK WAK+R V N+ G+L
Sbjct: 173 ELRRNLLQSEDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYL 232
Query: 290 GGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDP------------ML 337
GG+ AIL+A +CQ P+ + V+ FF+ Y+ W W PV++ + +
Sbjct: 233 GGISWAILMAKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLC 292
Query: 338 PAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHF 397
+M I P P + + TF I EF G DW+
Sbjct: 293 WKRDEDKRNDKIMQIITPAYPFFNTTFKVNKITFQTIFQEFQIGAQKLG-------DWNE 345
Query: 398 LFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
+ P + + FV + + + + ++ W G+ +++ L+
Sbjct: 346 VLRPLDFFDCFQYFVAISIVSKSSENFHKWTGFCEAQLPKLL 387
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 152/301 (50%), Gaps = 28/301 (9%)
Query: 179 HNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDL 238
H +LKS+ EV ++ +++A V +++ FDGI ID+ +A L +P+ +D + L+ L
Sbjct: 4 HELLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYL 63
Query: 239 DETSWKSLSGVRANKCILQLVPDLEKFQ-PVLRCIKLWAKRRGVYGNLHGFLGGVHLAIL 297
D+ +SL+G R K ILQ V +LE F+ L+ IKL AK G+Y N+ G+LG V AIL
Sbjct: 64 DQKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAIL 123
Query: 298 VAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSE 345
VA CQ +P + TL+ FF ++ W WP PV+L+ DP + A+ P
Sbjct: 124 VARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPP- 182
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYS 405
LMPI P P + N+T ST + T+D+ W LFEP +
Sbjct: 183 -YHLMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPSNFF 241
Query: 406 KKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPH 465
+ FV + S+ +W G+++S+ R LI G D NP ++T H
Sbjct: 242 DEXKHFVILSASSLTNKMSIEWSGFIESKIRHLI-------GSFDRNP------NITFAH 288
Query: 466 I 466
I
Sbjct: 289 I 289
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 24/351 (6%)
Query: 94 GLVPSTEEEDKRRNVIQKLKEIVL----AWVKRVAWQRRLPKEQIAETHATILTYGSYGL 149
++ + EE+ KR+NVI L+ I++ A K + W+R + + +GSY L
Sbjct: 21 NIIETEEEKIKRKNVIDLLQHILVNFQRAVTKDLDWKR-------GDIECFLSPFGSYAL 73
Query: 150 GVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGI 209
G + ++DID + + P + + FF +LK + VS + ++ A VP+++ D I
Sbjct: 74 GGYIRDADIDLVLVCP-IQVLRKYFFKFFPQLLKQQTLVSNVESIQKANVPIIKCTIDNI 132
Query: 210 LIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK-CILQLVPD-LEKFQP 267
ID+ + L V V +N++ L+ L+D+DET S+ G R N+ C Q+ + FQ
Sbjct: 133 SIDISFVRLKVERVAQNINFLDDSLLKDIDETCLASMDGPRVNQFCKNQIYRQHVRLFQV 192
Query: 268 VLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV---CQNHPKGSLNTLVANFFKTYAYW 324
L+CIK WA +RG+Y G+L G +L+ +N S+ +++ FF ++ W
Sbjct: 193 CLQCIKHWATQRGIYSKPIGYLNGSSWTLLLVKAYMSIKNKELLSVTMILSRFFSMWSQW 252
Query: 325 PWPTPVMLQDPMLPAAGYPSETRSL-------MPIRLPCSPHEYCHSNITRSTFYKIRTE 377
PW PVML D + G E SL MPI PC P +T+ST ++ E
Sbjct: 253 PWQMPVMLTDYIPGINGTKIEYNSLAEFDNAVMPIVSPCHPVCNVAPYVTKSTRRIMQIE 312
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
F RG P LF P Y+++Y F+ + S++ WV
Sbjct: 313 FERGWTLLNKNAHPFAIIDKLFNPVNYTQRYKHFINIVTSSTTITSHDTWV 363
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 138/264 (52%), Gaps = 6/264 (2%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
P+V D E +++ +T S E+ +KR ++ L+ ++ W+ V Q+ +
Sbjct: 26 GPTVADLKQNE---GMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQGMT 82
Query: 131 KEQIAE--THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
E + + + T+GS+ LG+ SDID LC+ P T E FF L L+ EV
Sbjct: 83 AENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTR-EAFFGSLVGKLQQMDEV 141
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ V DA P+++ G+ IDL +A L++ S D+ + L++LD+ S + ++G
Sbjct: 142 ETVTPVPDAYAPIIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVNG 201
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
R IL+LVP F+ LR IKLWAKRRG+Y N+ GF GG+ AILVA VCQ P
Sbjct: 202 TRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPNM 261
Query: 309 SLNTLVANFFKTYAYWPWPTPVML 332
LV FF + W W PV L
Sbjct: 262 QSVQLVRRFFLILSRWNWDNPVTL 285
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 137/238 (57%), Gaps = 3/238 (1%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L++ + G+ +E +R ++ KL +V W+ ++ + LP+ I T+G
Sbjct: 142 LIETLKPFGVFEEEKELQRRILILGKLNNLVKEWIWEISESKNLPQSVNENVGGKIFTFG 201
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK 205
SY LGVH +DIDALC+ P + DFF + LK + EV ++ V++A VP+++
Sbjct: 202 SYRLGVHTKGADIDALCVAPRHVDQS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLC 260
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
FDGI ID+ +A L + + PE++D+ + L++LD +SL+G R IL LVP+++ F
Sbjct: 261 FDGIEIDILFARLALQTFPEDLDLHDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNF 320
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK--GSLNTLVANFFKTY 321
+ LR IK+WAK +Y N+ GFLGGV A+LVA CQ +P S T F+TY
Sbjct: 321 RLTLRAIKIWAKHHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTQTSAHYIFQTY 378
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 153/322 (47%), Gaps = 24/322 (7%)
Query: 144 YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV-SEIHCVKDAKVPLM 202
YGSY LG + SD+DA+ +GP + + +L + S PE S V DA +PL+
Sbjct: 636 YGSYLLGTDEAGSDVDAVAIGPSSLSRDDFAHALLREVATSAPEAASSARFVADAAIPLV 695
Query: 203 RFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR-----DLDETSWKSLSGVRANKCILQ 257
+ G+ D+ YA S PE V P L LD + +S+ GV ++ +L
Sbjct: 696 KLSLGGVSFDVSYA-----SRPEGVTPCEPLTLLAQHAPQLDTSGLRSVLGVADSQGVLD 750
Query: 258 LV----PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT- 312
+ E+F+ +LR +K WAK RG+Y + G++GG+ +L A C + +
Sbjct: 751 ALGTDEATHERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTVLAAWACTRGAPDAAKSD 810
Query: 313 --LVANFFKTYAYWPWPTPVMLQDPMLPAAGY-PSETRSLMPIRLPCSPHEYCHSNITRS 369
L+A+FF+T+A WPWP PV L AGY P R LMP+ P P N++RS
Sbjct: 811 AELLAHFFQTFASWPWPQPVALTQET---AGYRPDGKRDLMPVIAPAEPLRNTARNVSRS 867
Query: 370 TFYKIRTEFLRGHN--TTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
TF +R E +R T W LF+P + +R+ + A +
Sbjct: 868 TFRTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRLSVEAPTPEAHEAA 927
Query: 428 VGWVKSRFRSLILKLEEVQGLC 449
+GWV +L+ +LE + LC
Sbjct: 928 MGWVLGHLTALVYRLEGDRRLC 949
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 159/358 (44%), Gaps = 50/358 (13%)
Query: 119 WVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV- 177
WV+ VA +R L + + T GSY LGVH +DID + + P F + +DFF
Sbjct: 8 WVRSVAIKRGLSPDAADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSFCSR-DDFFGSN 66
Query: 178 ------------------------LHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
L ++ +P V+ V++A VP++ F ++GI IDL
Sbjct: 67 YVPPGDAMDEGDDEDGEQARDPDSLAERIRRQPHVTNFVPVENAAVPILTFDWEGINIDL 126
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK----FQPVL 269
+A L S+P N D+ N L +D + KSL+G R I LV E+ F V+
Sbjct: 127 LFARLSTSSIPRNFDIDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVV 186
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTP 329
R ++ WAK RG+Y N G+ GGV++ + VA V Q +P + + FF + W WP P
Sbjct: 187 RLVRKWAKNRGLYSNKMGYWGGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNP 246
Query: 330 VMLQDPMLPAAG-------YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
VML P G + R + P+ P P +++R T + EF RGH
Sbjct: 247 VMLTRPHDAELGLQVWNSHQAANMRQVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGH 306
Query: 383 NTTRDLMRPDFDWHFLFEPFPYSKKYAR-FVRVYLSASNQDDLGDWVGWVKSRFRSLI 439
L + Y + R R+ ++ D W G+V+SR R L+
Sbjct: 307 GIVDKLYK------------DYQRGRDRPGGRLCITGPTLHDAQAWAGFVESRLRKLV 352
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 157/302 (51%), Gaps = 18/302 (5%)
Query: 211 IDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 270
IDL +A L + ++PE++D+L+ L++LD +SL+G R IL LVP++ F+ LR
Sbjct: 1 IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60
Query: 271 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 330
IKLWAK + VY N+ GFLGGV A+LVA +CQ +P TLV FF Y+ W WP PV
Sbjct: 61 AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120
Query: 331 MLQD---------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG 381
+L+ P+ P++ LMPI P P + N++ S+ ++ F RG
Sbjct: 121 LLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRG 180
Query: 382 HNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILK 441
++ W LF P + +KY ++ + +++ + +W G V+S+ R LI+
Sbjct: 181 FQVMEEIYSKTSTWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILIVN 240
Query: 442 LEEVQ--GLCDPNPTEYIDVDVTEPHIVFYW--GLQ----PGRTNL-LDIVAVEKDFLKN 492
LE Q L NP Y + +E V W GL+ G N+ +DI A + F
Sbjct: 241 LERNQFVKLAHVNPKSYDPILKSESGTVSRWFIGLEFQKPEGTKNVKVDITAEIQYFTST 300
Query: 493 IH 494
+H
Sbjct: 301 VH 302
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 173/346 (50%), Gaps = 22/346 (6%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
+ +I++L++ ++ W+K L + E + +GSY G +G +SDID + L
Sbjct: 57 KDKLIEELRQNIIRWLK-------LYQSVEQEFAGELAVFGSYRFGANGKDSDIDLIILA 109
Query: 165 PEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVP 224
P FF L ++L S +V+ ++C+++A VPL+RFKF GI DL +AC+
Sbjct: 110 PPQIDRELHFFQQLPSILSSNSKVTNLYCIQEAMVPLIRFKFAGIQFDLVFACVK----- 164
Query: 225 ENVDVLNPFFLRD-LDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYG 283
++ P D +DE S +SL+G++ + + + + L+ IK WA RG+YG
Sbjct: 165 ---KIMKPLSQSDPVDEKSSRSLNGLKVSDYFSKYCHQ-KSYLSFLKFIKAWAINRGIYG 220
Query: 284 NLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPW-PTPVMLQ--DPMLPAA 340
N+ G+LGG+ IL + Q +P S+ L+ FF ++ W W PV++Q D + +
Sbjct: 221 NVMGYLGGISWQILTHKIFQLYPNYSVQGLIERFFFIFSQWKWNELPVVIQKCDEIWRNS 280
Query: 341 GYPSETR--SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFL 398
+ + + ++M I P P+ N++ TF I + + + + + W L
Sbjct: 281 LFEQQQKQHNVMSILTPVYPYINSAYNVSNCTFTIIEEQLKLANIIMQKICLSELQWSDL 340
Query: 399 FEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
+ + Y ++++ + N+DDL W ++S+ R L L+E
Sbjct: 341 LKKIQFFDIYYTYLQIRALSKNKDDLIQWKSHIESKLRKLNKMLDE 386
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 164/380 (43%), Gaps = 41/380 (10%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+ E RS L EG S+E R +++L E+ RL E
Sbjct: 656 LSEPRSTLHDALSAREGWE-SSEAHRARIQAVKRLNEVC----------SRLGLE----- 699
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ YGS+ +G G+ SD+DA+ +GP + EDF L L + + DA
Sbjct: 700 ---LYPYGSFLMGTSGTGSDVDAVVIGPAHLSR-EDFAGALLQALTQEKDCEGARFIADA 755
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFL-----RDLDETSWKSLSGVRAN 252
+PL++ G+ D+ YA S PE V P L LD ++SL+G
Sbjct: 756 AIPLVKLSLGGVHFDVSYA-----SRPEGVAPCPPAELLARQGERLDLAGFRSLTGWADT 810
Query: 253 KCILQLV----PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
+L+ V DLE+F+ +LR +K WAK RGVY + G+LGG A+L A C P+
Sbjct: 811 DALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRD 870
Query: 309 SLNT---LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSN 365
S T L+ FF+ +A WPWP PV L A P R MP+ P P N
Sbjct: 871 SSRTEEQLLDYFFEMFAAWPWPLPVTLTPGT--ARYVPEGKRDQMPVVAPALPPRNTARN 928
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDF--DWHFLFEPFPYSKKYARFVRVYLSASNQDD 423
++RST +R E R R + W LF P A V V + A +D
Sbjct: 929 VSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHED 988
Query: 424 LGDWVGWVKSRFRSLILKLE 443
GW+ +L+ +LE
Sbjct: 989 RQVAAGWILGHLTALVYRLE 1008
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 164/380 (43%), Gaps = 41/380 (10%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
+ E RS L EG S+E R +++L E+ RL E
Sbjct: 600 LSEPRSTLHDALSAREGWE-SSEAHRARIQAVKRLNEVC----------SRLGLE----- 643
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
+ YGS+ +G G+ SD+DA+ +GP + EDF L L + + DA
Sbjct: 644 ---LYPYGSFLMGTSGTGSDVDAVVIGPAHLSR-EDFAGALLQALTQEKDCEGARFIADA 699
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFL-----RDLDETSWKSLSGVRAN 252
+PL++ G+ D+ YA S PE V P L LD ++SL+G
Sbjct: 700 AIPLVKLSLGGVHFDVSYA-----SRPEGVAPCPPAELLARQGERLDLAGFRSLTGWADT 754
Query: 253 KCILQLV----PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
+L+ V DLE+F+ +LR +K WAK RGVY + G+LGG A+L A C P+
Sbjct: 755 DALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRD 814
Query: 309 SLNT---LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSN 365
S T L+ FF+ +A WPWP PV L A P R MP+ P P N
Sbjct: 815 SSRTEEQLLDYFFEMFAAWPWPLPVTLTPGT--ARYVPEGKRDQMPVVAPALPPRNTARN 872
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDF--DWHFLFEPFPYSKKYARFVRVYLSASNQDD 423
++RST +R E R R + W LF P A V V + A +D
Sbjct: 873 VSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHED 932
Query: 424 LGDWVGWVKSRFRSLILKLE 443
GW+ +L+ +LE
Sbjct: 933 RQVAAGWILGHLTALVYRLE 952
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 155/279 (55%), Gaps = 15/279 (5%)
Query: 93 EGLVPSTEEEDK--RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLG 150
+G+ P+ E + + V+++L +++ WVKRV +R L +E I T ++ GSY LG
Sbjct: 432 DGISPTDAPEARMHKLQVLKQLSDLLTKWVKRVGRERELSEEHITLTKGSLFLAGSYRLG 491
Query: 151 VHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGIL 210
+ SDIDA+C+ P T +DFF +L P VS + V+ A VPL+ F G+
Sbjct: 492 LDDPNSDIDAVCVAPWHVTH-DDFFGSFCQLLAQTPGVSHLAPVRSAYVPLISLSFLGVR 550
Query: 211 IDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 270
+DL ++ L + SV N ++ + L + ETS K+L+ R + +L LVP +++ VLR
Sbjct: 551 MDLLFSRLPMSSVESNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLR 610
Query: 271 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 330
++ WA+RRG+Y G+LGG+ AILVA VCQ +P + FF+ + W WP PV
Sbjct: 611 AVRAWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPV 670
Query: 331 MLQDPMLPAAGY------PSET---RS-LMPIRLPCSPH 359
ML M+ AG P ++ RS +MPI P PH
Sbjct: 671 MLN--MIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPH 707
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 117/218 (53%), Gaps = 16/218 (7%)
Query: 238 LDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAIL 297
LD S +SL+G R IL LVP++E F+ LR IKLWAK+ G+Y N G+ GGV A+L
Sbjct: 1 LDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAML 60
Query: 298 VAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSE 345
VA CQ +P + TLV FF ++ W WP PV+L+ DP + A S+
Sbjct: 61 VARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNA----SD 116
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYS 405
MPI P P + N++ ST I TEF RG N T ++M W LFE +
Sbjct: 117 RYHPMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFF 176
Query: 406 KKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+Y F+ + +++ DD +W G V+S+ R LI LE
Sbjct: 177 YRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLE 214
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 216/453 (47%), Gaps = 48/453 (10%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL-------PKEQIAET 137
S+ ++ + L+P+ E+ R+ V+ +K I + + +R ++RL PK
Sbjct: 22 SIRHVIRSSKLMPTLEDYQSRKIVVYIIKNIAIKFAER---KQRLSFSMNTDPKSPEIFI 78
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
H GSY + +SD+D + + P++ T +DFF + L P + E V++A
Sbjct: 79 HEN----GSYLMDTWEPDSDVDVILIAPKYFTY-KDFFEGFYEELIRHPSIKETIKVENA 133
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
VP+++ + I +D+ +A L+ +N++ + + L+ + SL+G I
Sbjct: 134 FVPIIKTVCNDISVDISFAPLNNQIKIKNLNNIKKEDMDKLEPKAQLSLNGYLNCLLIRD 193
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
L+ + F R I+ WA++R ++GNL+G+L G++++++ A +C HP SL+ L+ +F
Sbjct: 194 LMKNHPNFPYFTRFIRNWAQKREIFGNLYGYLKGINISMMCAIICNQHPNCSLSMLIFHF 253
Query: 318 FKTYAYWPWP--------TP-VMLQDPM-LPAAGYPSETRSLMPIRLPCSPHEYCHSNIT 367
F+ ++ W W TP L DPM L YP + SL +T
Sbjct: 254 FEYFSSWDWDIQLNLDSNTPDFQLNDPMILMTQSYP-QINSLRA--------------VT 298
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW 427
S+ +I E R TT+ + D W LF+ + Y F+ + L +N +
Sbjct: 299 TSSRKRIIKELQRALETTKKALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQIKDEI 358
Query: 428 VGWVKSRFRSLILKLEEVQGLCDPN--PTEYIDVDVTEPHIVFYWGL--QPGRTNLLDIV 483
+G++ S+ L+ LEE+ G+C+ N P++ I+FY GL + G++ +DI
Sbjct: 359 IGFLSSKLTRLVKILEEIPGICEANIWPSKI----SYGGKIIFYIGLNTKSGQSKTIDIN 414
Query: 484 AVEKDFLKNIHNGFQGSPGRMGLLVVQASQLSK 516
+ +F+ I + G + +++ +L +
Sbjct: 415 HAKNNFISYISSSTLGKAMSINFKIIRKKELKQ 447
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 128/246 (52%), Gaps = 17/246 (6%)
Query: 211 IDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 270
IDL YA L V SVP N+D+ N LR LDE + ++G R IL+LVP + F+ LR
Sbjct: 51 IDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALR 110
Query: 271 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 330
IKLWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV
Sbjct: 111 AIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPV 170
Query: 331 MLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
+L+ +P + Y + LMPI P P N++ ST + E
Sbjct: 171 LLKPIEEGPLQMKVWNPQI----YHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLREL 226
Query: 379 LRGHNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
RG + + W+ LF +S+ Y ++ + ++ ++D W G V+S+ R
Sbjct: 227 KRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRH 286
Query: 438 LILKLE 443
L+ L+
Sbjct: 287 LVGALD 292
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 169/373 (45%), Gaps = 34/373 (9%)
Query: 80 EERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHA 139
E L + + + G V S E R +++L++ E+I A
Sbjct: 591 EHEDAPLREALASIGAVESHEGHAARTAAVEQLRQHC---------------ERIG---A 632
Query: 140 TILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKV 199
T+ YGSY LG G+ SD+DA+ +GP A ++ D F ++L++ S + V DA +
Sbjct: 633 TLHPYGSYLLGTDGAGSDVDAVAIGP--AELSRDAFA--QSLLQALAPGSARY-VADAAI 687
Query: 200 PLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLV 259
PL++ G+ DL YA PE+ L LD +++ G+ ++ V
Sbjct: 688 PLVKLTLGGVSFDLAYAGRPEGVPPEDPLTLLGLHGEQLDPAGLRAVLGLADTLGLMDAV 747
Query: 260 PD----LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT--- 312
E+F+ +LR +K WA+ RG+Y + G+LGG+ +L A C ++ +
Sbjct: 748 ARDAARTERFRTLLRAVKAWARARGIYSHALGYLGGLSWTLLAAWACTRATPDAMRSDAA 807
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
L+++FF T+A WPWP PV L A P R L+P+ P P N++RST+
Sbjct: 808 LLSHFFGTFAAWPWPQPVTLTPET--ARYRPEGKRDLLPVIAPALPARNTARNVSRSTYR 865
Query: 373 KIRTEFLRGHNTTRDLM--RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGW 430
IR E LR R W LF+P + +R+ + A +D GW
Sbjct: 866 VIREELLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDAPTAEDREVVAGW 925
Query: 431 VKSRFRSLILKLE 443
+ +L+ +LE
Sbjct: 926 ILGHVTALVYRLE 938
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 138/252 (54%), Gaps = 4/252 (1%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQ-RRLPKEQIAET 137
D ERS + +M + + E E ++ + +L+EIV W +A Q + E+ +
Sbjct: 44 DRERSQEIDYMM--KPYFGTEETELSKQRYVNELQEIVTKWSTELAQQILGVSSEESKKY 101
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
A +LT+GS LGV + DID +C P F F L +L + V ++ ++ A
Sbjct: 102 TAKLLTFGSSILGVSSKKGDIDMVCTCPNFIKRNPHFEEELCQILLNNENVKQLSNIRTA 161
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVD-VLNPFFLRDLDETSWKSLSGVRANKCIL 256
KVP++ F++ ID+ +A L + +P ++ ++ L++++E SLSG R N+ I+
Sbjct: 162 KVPIITFQYKEQDIDISFAQLQLPQLPPTIEEYVSDDLLQNMEERDILSLSGRRCNQAIV 221
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
+ VP+L+ FQ R IKLWA+ +G+Y N GFLGG+ AILVA +CQ P N L+
Sbjct: 222 RSVPNLQNFQITCRFIKLWAQSKGIYENSIGFLGGISWAILVAKICQMFPNYEANQLLDE 281
Query: 317 FFKTYAYWPWPT 328
FF Y+ W + +
Sbjct: 282 FFYYYSNWDFTS 293
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 156/336 (46%), Gaps = 53/336 (15%)
Query: 108 VIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEF 167
++ + ++V +V V+ + L ++ E I T ++ LGVHG SDID +C+ P+
Sbjct: 41 LLSNIAQLVTKFVHDVSIKNGLSEKVATEAGGRIYT-SAFRLGVHGPGSDIDTICVCPKH 99
Query: 168 ATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENV 227
E FF ML+ P +EI A VP+M+ G+ +DL +A +++ + +
Sbjct: 100 -VYREHFFGEFQQMLRDWPACTEISS---AFVPVMKTVISGVEVDLLFARVNLPEAGDKL 155
Query: 228 DVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHG 287
D+ LR +D+ S +SL+ IL LVPD+ F+ LR I+LWAK
Sbjct: 156 DIEKDEILRGVDDASQRSLN---VTDMILNLVPDVATFRTALRTIRLWAK---------S 203
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETR 347
F GGV A+L A +CQ +P + +T+V+ FF Y W
Sbjct: 204 FPGGVAWALLTARICQLYPNAAPSTIVSKFFPIYYQW----------------------- 240
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
MP+ P P NIT+ST I+ E LR + + P W LF P +
Sbjct: 241 --MPVITPAYPSMCSTHNITQSTMTIIKNEMLR----DKIVNNPGSSWVELFTPVDFFSL 294
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
Y +V+V SAS+ DL DW R+L+ LE
Sbjct: 295 YRTYVQVVASASSAQDLKDW-------LRTLVQDLE 323
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 114/198 (57%), Gaps = 2/198 (1%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A +L +GS+ LGV E DID +C P+F F L+ + K+ + E+ + +A
Sbjct: 4 AKLLPFGSFLLGVSFKEGDIDMVCASPQFIKRETHFHEDLYKIFKANKNIKELKNIIEAN 63
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPF-FLRDLDETSWKSLSGVRANKCILQ 257
+P++ F ++ ID+ +A + +PEN++ P L D+ E SL+G R N+ I+
Sbjct: 64 IPIISFIYNDQDIDISFAQFKLNILPENIEGEIPEELLEDMTEKDVDSLNGRRCNQSIIN 123
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
V D EKF+ L+ IKLWAK +GVY N+ GFLGG+ AILVA +CQ P +N L+ F
Sbjct: 124 SVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGISWAILVAKICQMFPNYEVNQLINEF 183
Query: 318 FKTYAYWPWPT-PVMLQD 334
F Y +W + P+ +++
Sbjct: 184 FYYYTHWDFSQIPIKIKE 201
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 116/219 (52%), Gaps = 10/219 (4%)
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G R IL LVP+++ F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 308 GSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETRSLMPIRLPCSPH 359
+TLV FF ++ W WP PV+L+ P LP PS+ LMPI P P
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 360 EYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSAS 419
+ N++ ST + EF +G T +++ +W LFE + +KY ++ + SA
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 183
Query: 420 NQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +WVG V+S+ R L+ LE E L NP +
Sbjct: 184 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 222
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 155/292 (53%), Gaps = 13/292 (4%)
Query: 178 LHNMLKS-RPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR 236
L+N++K EV + V+DA VP+++F+FDGI IDL +A L + ++ +N+D+ + L+
Sbjct: 91 LNNLVKEWIAEVGKNKAVEDAYVPVIKFEFDGIEIDLVFARLALPTISDNLDLRDDSSLK 150
Query: 237 DLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGF--LGGVHL 294
LD +SL+G R IL LVP+ E F+ LR IKLWAKR+ + + + L +
Sbjct: 151 SLDIRCIRSLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLCLISW 210
Query: 295 AILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSET 346
A+L C+ + G + V + ++++ WP PV+L++P LP PS+
Sbjct: 211 AVLSXITCKIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDR 270
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSK 406
LMPI P P + N++ ST + EF G ++ + DW L EP + +
Sbjct: 271 YHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPPNFFQ 330
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
KY ++ + S+S ++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 331 KYKHYIVLTASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 382
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 156/339 (46%), Gaps = 16/339 (4%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL QL+ + +R VI ++ + AW+ + + L + + + +
Sbjct: 37 SLRQLLYQQKQYECERRVSERHEVINRMLSFLRAWLFSMMESKGLREALNSMPTFRLRQF 96
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP-EVSEIHCVKDAKVPLMR 203
GS LGV SDID + P + T E+FF ML+ E++++ + A VP++R
Sbjct: 97 GSLRLGVQDFYSDIDLCFVAPRWVT-REEFFTGFPRMLEQYSHEITKLSVLPSAYVPVIR 155
Query: 204 FKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDL--DETSWKSLSGVRANKCILQLVPD 261
I +D+ +A V + +D+L + L D +SL+G R + +L+ VP
Sbjct: 156 ATCHDIQVDIVFARTEVDEISRELDLLAGANIESLISDIRCVRSLNGYRVTEMVLRFVPR 215
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTY 321
FQ L+ I+ WAK + +Y + G+LGGV AILVA VC PK ++ FF
Sbjct: 216 YRVFQLALKAIRYWAKCQKIYSHTLGYLGGVSWAILVAKVCTMFPKAGAARILNKFFLVM 275
Query: 322 AYWPWPTPVMLQDPMLPAA-GYPSETRS-------LMPIRLPCSPHEYCHSNITRSTFYK 373
+ W WP PVML LP G S+ S +MPI P P + N+++ST
Sbjct: 276 SQWRWPEPVML----LPEGYGVSSQLWSITQMPWDIMPIITPVYPQQNSSFNVSKSTLLV 331
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV 412
++ G T D++ DW F P + Y +V
Sbjct: 332 MKNALTEGVRITDDILMERCDWKSFFHPVHIADMYEHYV 370
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 151/308 (49%), Gaps = 27/308 (8%)
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GSY LGV ESD+D +C P + + +DF + LK E I V DAKVPL+R
Sbjct: 723 GSYRLGVESPESDLDVVCQIPTYLS-GDDFLKNVQQRLKGLCE--SIQLVLDAKVPLLRL 779
Query: 205 KFDGILIDLPYACLHVLSVPEN-VDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD-- 261
K +GI +DL Y V +N +NP + S ++ G I + V +
Sbjct: 780 KLEGISLDLLYT-----GVDKNWASGINPKPTK-----SEMAIIGCWEADFIREFVQEYV 829
Query: 262 -LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSLNTLVAN 316
+ FQ +LR ++ WAK R +YGN GFLGG+ A+L A CQ NH + + L+AN
Sbjct: 830 PFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHTQP--DKLLAN 887
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGYPSET-RSLMPIRLPCSPHEYCHSNITRSTFYKIR 375
FF + W P+ L D Y + R L+PI P + NITRST +
Sbjct: 888 FFNHLNQYNWRQPIALTDA---GKQYSVQVPRDLLPIITSIEPCQNTARNITRSTAEILS 944
Query: 376 TEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRF 435
EF R T+++ + DW LFEP ++ F+ + L +++ L G+++
Sbjct: 945 GEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKECGYLEGYI 1004
Query: 436 RSLILKLE 443
SLI++LE
Sbjct: 1005 ISLIIQLE 1012
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 172/371 (46%), Gaps = 36/371 (9%)
Query: 106 RNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGP 165
+ V + + +V W K A+ L +E + ++ GS LG+ SDID + +
Sbjct: 54 KRVFELMSRLVTEWGKEYAFSTGLKEE---DCRCELMAIGSARLGLQDPSSDIDCVVVAA 110
Query: 166 EFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVP 224
T + FF + L +V+ ++ V A VP+++ KF G+ +D+ Y L H LS P
Sbjct: 111 HKVTR-DAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGP 169
Query: 225 ENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGN 284
+D + L +DE S +S++GVR + I VP F LR I+ WA+RRG+Y N
Sbjct: 170 A-IDPADDNLLCGMDEKSARSINGVRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSN 228
Query: 285 LHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPW-PTP---VMLQDPMLPAA 340
G+LGGV AILVA VCQ P + LV FF+ Y+ W W P+ V+
Sbjct: 229 ALGYLGGVSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGE 288
Query: 341 GY---------PSETRSLMPIRLPCSPH-----EYCHSN----ITRSTFYKIRTEFLRGH 382
G+ P T + P+ L SP Y N +TR T I+ E RG
Sbjct: 289 GFQHHKVWCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGA 348
Query: 383 NTTRDL---MRPDFDWHFLFEP---FPYSK-KYARFVRVYLSASNQDDLGDWVGWVKSRF 435
+R W L EP F Y + Y +F+++ + +++ G V S+
Sbjct: 349 GIISSKGVDLRSRECWETLLEPIHFFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKL 408
Query: 436 RSLIL-KLEEV 445
+ L+L K+ EV
Sbjct: 409 KPLLLRKMPEV 419
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 102/167 (61%), Gaps = 8/167 (4%)
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
A VP+++ FD I ID+ +A L + ++PEN+D+ + L++LD +SL+G R IL
Sbjct: 1 AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVAN 316
LVP++E F+ LR IKLWAKR +Y N+ GFLGGV A+LVA CQ +P +TLV
Sbjct: 61 HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120
Query: 317 FFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSETRSLMPIRLP 355
FF ++ W WP PV+L+ P LP G PS+ LMPI P
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 108/169 (63%), Gaps = 1/169 (0%)
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
+DIDALC+ P + DFF + LK + EV ++ V++A VP+++ FDGI ID+ +
Sbjct: 3 ADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLW 275
A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F+ LR IKLW
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 276 AKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
AKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 122 AKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 154/341 (45%), Gaps = 31/341 (9%)
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEI 191
++I HA+I GS+ LGV S+SD+D LCLGP +++ D F + +
Sbjct: 815 KRIVGEHASIQLTGSHQLGVDTSDSDLDVLCLGPH--SLSLDAFQAAAVNEFEAIGLRSV 872
Query: 192 HCVKDAKVPLMRFKF-DGILIDLPYACL----HVLSVPENVDVLNPFFLRDLDETSWKSL 246
V DA VPL++ F G DL Y L H+ P + P L+ +D T+ +L
Sbjct: 873 RPVCDALVPLVKLVFRSGAEADLLYVRLPADAHLPCTPAQI---KPRSLKAMDSTAQLTL 929
Query: 247 SGVRANKCILQLVPD--LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC-- 302
G N ++ +P L F+ +LR +K WA RG+Y N GFLGG ++LVAH
Sbjct: 930 QGWLENDALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGFSWSVLVAHFMVK 989
Query: 303 ----------QNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSET--RSLM 350
Q+ L L+ FF A WPWP P++L P+ A P++ S+M
Sbjct: 990 TKPSPLGDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPL--GATLPADAIGESVM 1047
Query: 351 PIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYAR 410
P+ P P ++ ST +R E RG + T D + +P S
Sbjct: 1048 PVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLT---AAADCSLAAVADPLGVSTLAKG 1104
Query: 411 FVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDP 451
+ V L N+ +L GW+ SR L+ +LE C P
Sbjct: 1105 ILVVQLQCLNKSELERGAGWLLSRLGVLVHELERCGVACRP 1145
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 108/169 (63%), Gaps = 1/169 (0%)
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
+DIDALC+ P + DFF + LK + EV ++ V++A VP+++ FDGI ID+ +
Sbjct: 3 ADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLW 275
A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F+ LR IKLW
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 276 AKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
AKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 122 AKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 108/169 (63%), Gaps = 1/169 (0%)
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
+DIDALC+ P + DFF + LK + EV ++ V++A VP+++ FDGI ID+ +
Sbjct: 3 ADIDALCVAPRHVDRS-DFFTSXYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLW 275
A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F+ LR IKLW
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 276 AKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
AKR +Y N+ GFLGGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 122 AKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 117/220 (53%), Gaps = 20/220 (9%)
Query: 209 ILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPV 268
I IDL +A L+V + ++++L+ L++LDE S SL+G R IL LVP+ + F
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373
Query: 269 LRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPT 328
LRCIK WAKRRG+ G+L+G+ GGV AI VA +CQ P T++ +F+ Y W WPT
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433
Query: 329 PVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
PVML+ DP + +PS+ MP+ P P NI ST + +
Sbjct: 434 PVMLKKIENLNYNLKVWDPKI----HPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKE 489
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
E RGH L+ +W F + ++Y F+ V++
Sbjct: 490 ELERGHR----LLAEGKEWKEFFRSTDFFQRYKSFLAVFI 525
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ + D RS SL + + + + EE R V+ +L + ++K + ++
Sbjct: 14 PLSVKESPEDDIARSSSLQAFLLSSKIYETNEEAITRERVLGRLSYMFDNFIKAIGTKKG 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
L I I T+GSY LGVH SDID LC+ P + E FF ++ML
Sbjct: 74 LTDSDIKAASGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKE-FFEEFYSMLSDV--F 130
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLN 231
+E+ V+DA VPLM+ + ID C + +D+ N
Sbjct: 131 AEVEKVEDAYVPLMQLVYREHRIDECEGCGAMSGDGNKMDISN 173
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 141/310 (45%), Gaps = 32/310 (10%)
Query: 105 RRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLG 164
R ++ KLK +V WV+ V+ + +P+ + I T+GSY L V+ ++IDALC
Sbjct: 42 RMEILSKLKTLVKQWVRNVSISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCEA 101
Query: 165 PEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVP 224
P +D+F +LK +PEV+ V++A VP++ FDGI IDL +A L + +P
Sbjct: 102 PR-NIERQDYFGSFFELLKKQPEVTGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIP 160
Query: 225 ENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGN 284
+N D+ L++LD +++ VP R + G+Y N
Sbjct: 161 DNFDLREDMLLKNLDPK-------------LVERVP---------RHRRDPTAEHGIYSN 198
Query: 285 LHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP- 343
G+ GGV +LVA CQ P T V FF + W WP PV L+ P G+
Sbjct: 199 SLGYFGGVSWGMLVARTCQ-LPNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQV 257
Query: 344 -------SETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWH 396
+ LM I P P + +++ ST + EF T ++M W
Sbjct: 258 WDSRVNVQDRFHLMSIITPAYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWD 317
Query: 397 FLFEPFPYSK 406
LFE +S+
Sbjct: 318 KLFEAPSWSE 327
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 106/169 (62%), Gaps = 1/169 (0%)
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
+DIDALC+ P + DFF + K + EV ++ V++A VP+++ FDGI ID+ +
Sbjct: 3 ADIDALCVAPRXVDRS-DFFTSFYEKXKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLW 275
A L + ++PE++D+ + L++LD +SL+G R IL LVP+++ F+ LR IKLW
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 276 AKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
AKR +Y N+ GF GGV A+LVA CQ +P +TLV FF ++ W
Sbjct: 122 AKRHNIYSNILGFXGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 180/404 (44%), Gaps = 43/404 (10%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK---SRPE---VSEIH 192
A++ GS LGV S SD+D +CL P++ T E F + + L+ PE
Sbjct: 638 ASLHLLGSARLGVASSTSDLDVVCLIPDYLT-GESFLTRVADCLQGLCDSPEERLCQRSQ 696
Query: 193 CVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDE--TSWKSLSGVR 250
V DAK P++R + +GI +DL Y + V E ++ RDL KS+ G
Sbjct: 697 VVLDAKYPVLRLEIEGISLDLLYTQVAVSDGWETRNI------RDLRSQIKDTKSIVGCW 750
Query: 251 ANKCILQLVPD---LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNH-- 305
I+ LV LE+FQ +L+ ++ WAK RG+YGN GFLGG ++L A+ C ++
Sbjct: 751 EADLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTCIDYRG 810
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSN 365
P SL L+ANFF+ + W + L + L + L+PI P + N
Sbjct: 811 PDKSLAALLANFFQILSQHNWRQTIALTE--LGKQHQVKLPQDLLPIISSIEPCKNTARN 868
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
ITRST +R EF R + +++ W L+EP + + + + +++
Sbjct: 869 ITRSTAKILRDEFARAAEISTNILVGKDAWTSLYEPIDLTIGTNALLSIEILDTDEQCRQ 928
Query: 426 DWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLDIVAV 485
++S L ++LE++ PNP + +E +F LQ +
Sbjct: 929 KCSDLLESTIIGLTIQLEQLDVFVRPNP----QISTSESKSIFTLFLQLR-------LDC 977
Query: 486 EKDFLKNIHNGFQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTK 529
E + + N F G Q + +S +++LD R K
Sbjct: 978 ETQTIAKLVNDFIG----------QLNGVSNTTKLDLSIARNCK 1011
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 157/322 (48%), Gaps = 36/322 (11%)
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
+ GI +D+ +A L ++PEN+D+ + L +LDE+S +SL+G+R + +L+LVP+ + F
Sbjct: 3 YSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTF 62
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWP 325
LR IKLWAK GVY N GF GG+ AILVA CQ +P + + ++ F ++ W
Sbjct: 63 CQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWK 122
Query: 326 WPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
WP+PV+L+ + C + + +ST + I+ E
Sbjct: 123 WPSPVVLK-------------------QFGCVDSKLAN---LKSTLHIIQEEMKSALEIC 160
Query: 386 RDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEV 445
+ + + W+ LFE + +Y FV + ++ +G+ +S+ R L+ +E
Sbjct: 161 DQIQKGNATWNDLFEEINFFSRYKHFVALTINEDTN------IGFFESKIRQLVQIIERN 214
Query: 446 QGL--CDPNPTEYIDVDVTEPHIVFYWGLQ-PGRTNLLDIVAVEKDFLKNIHNGFQGSPG 502
+ NP + ++ ++ GL+ LD+ + + F +N+ Q S G
Sbjct: 215 SQVKTAHINPRKLKNI---RNESTWFLGLEFTENAKNLDLTSEIEGFKRNMAR--QQSKG 269
Query: 503 RMGLLVVQASQLSKSSQLDFGS 524
+G + + A+ + +S + F S
Sbjct: 270 IVGQIQLDATYVKRSDLIKFIS 291
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 134/286 (46%), Gaps = 45/286 (15%)
Query: 200 PLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLV 259
P + K I IDL +A L++ + ++++L+ L++LDE S SL+G R IL LV
Sbjct: 316 PGLNKKMVEIKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLV 375
Query: 260 PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFK 319
P+ F LRCIK WAKRR + G+L+G+ GGV AI VA +CQ P T++ +F+
Sbjct: 376 PNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFE 435
Query: 320 TYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNIT 367
Y W WP PVML+ DP + +PS+ MP+ P P NI
Sbjct: 436 LYKEWKWPMPVMLKKIENLNYNLKVWDPKI----HPSDKFHKMPVITPSYPSMCSTHNIM 491
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL------SASNQ 421
ST + + E R H L+ +W+ F + ++Y F+ V++ +N
Sbjct: 492 NSTMKRYKEELERAHK----LLVEGAEWNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNN 547
Query: 422 DDLGD-------------------WVGWVKSRFRSLILKLEEVQGL 448
D + W G V SR R L KLE V+ L
Sbjct: 548 DARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLETVEQL 593
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
PL+ Q D R+ SL + + + + EE R V+ +L + ++K + ++
Sbjct: 14 PLSLKESSQDDIARTSSLHAFLVSSKIYDTDEEAIIRERVLGRLSYMFDNFIKAIGTKKG 73
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMA---EDFFVVLHNMLKSR 185
L I I T+GSY LGVH SDID LC+ P + E+F+V+L+++
Sbjct: 74 LADSDIRTATGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKEFFEEFYVMLNDVF--- 130
Query: 186 PEVSEIHCVKDAKVPLMRF 204
+E+ V+DA VPLM+
Sbjct: 131 ---AEVEKVEDAYVPLMQL 146
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
LVP F+ LRCIK+WA++R VYGN+ GF GGV A+LVA +CQ +P + +V F
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 318 FKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSN 365
F Y W WP PV+L+ +P L YP + MP+ P P N
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRL----YPHDRLHRMPVITPAYPSMCATHN 116
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSA-SNQDDL 424
IT ST I E RG + +D+ W LFE + KY ++ V + + ++
Sbjct: 117 ITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAATIDSAEEH 176
Query: 425 GDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
W G+++S+ R L+LKLE +G+ +P
Sbjct: 177 KKWSGFIESKLRQLVLKLEVAEGVEIAHP 205
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 204/497 (41%), Gaps = 130/497 (26%)
Query: 19 YNFVDFYPQNAN---FGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVL 75
YN+ + N N G Q++ N N + +VP + +F+ P
Sbjct: 53 YNYKNLNSTNKNEQHLGSEDKQNVTQQNQNKNIIQEQVVPV-----VKSNFDDPY----- 102
Query: 76 DQMDEERSLSLVQLMTNE-GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQ-RRLPKEQ 133
E +L + LM + + E++ KR+ ++ KLK+I+ W A + R++ +E
Sbjct: 103 -----EETLYMKFLMREKYTIYEDQEQKRKRQEILAKLKDILDKWQIECAVKDRKILRED 157
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
+ HA+I +GSY L H E+D+D +C+ P + + +DFF N++ S EV+ +
Sbjct: 158 AEKRHASIHPFGSYELQAHFPETDMDVICVLPSY-ILHDDFFNKFKNLITSYEEVTNVID 216
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
V DA+VP+++FKF G ID+ YAC+ + N + P ++ DET + LS
Sbjct: 217 VVDARVPVLKFKFQGFQIDMLYACIDYKLIENNPKI--PKMIK--DETIFNKLSQ----- 267
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
GGV AILVA +CQ++ L +
Sbjct: 268 ------------------------------------GGVSYAILVAKICQDNTDLYLCDI 291
Query: 314 VANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRLPCSPHEY 361
+ FF+ YA W W PV ++ + + Y ++ +MPI P + +
Sbjct: 292 IYKFFEVYADWKWFDPVFIRVGKKKDKTKLDLNKLQVLDAY---SQDIMPILTPNTNPKN 348
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLM-------------------------------- 389
+ TF I EF RG N ++L+
Sbjct: 349 SAYRVCSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVDALQ 408
Query: 390 -----------------RPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 432
+ W LF+ F + +Y F+++ + ++++ W+G+V+
Sbjct: 409 IQESNQESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLGYVE 468
Query: 433 SRFRSLILKLEEVQGLC 449
S+ R L+ L++++ +
Sbjct: 469 SQLRRLMQLLQDIEQIS 485
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 196/438 (44%), Gaps = 56/438 (12%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLG--VHGSE 155
S E+ D+ ++++L E +L + P A T + +GS GLG + GS+
Sbjct: 37 SMEKTDEVVRLVRQLLEKLL---------QAEPSAAAAWTQ--VYVFGSSGLGAAITGSD 85
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
D+ ALC ++ FF + R + ++ V A+VPL++F ++G+ +DL +
Sbjct: 86 IDLIALCSASVNTSL---FFQKFPRSAEGR--LQDVVVVTSARVPLIKFSYNGVHVDLLF 140
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP-DLEKFQPVLRCIKL 274
A + + + P+ ++L FL + +++G+R I + +P L+ + VLR +K
Sbjct: 141 ASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKY 200
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPW------PT 328
WA RR VYGNL+ F GV LAI+VA CQ P + ++ FF Y +W P
Sbjct: 201 WAARRQVYGNLYTFPNGVCLAIMVARACQLCPVADSSVILRFFFSLYVWWLQRGTRIDPV 260
Query: 329 PVMLQDPMLPAAGYPS---------ETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFL 379
++ D + A P + L P+ P P + RS E L
Sbjct: 261 SIVPTDENVAIARVPGMPPPWDAVWDAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELL 320
Query: 380 RGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ------DDLGDWVGWVKS 433
R + P + L+EP+ ++ FV V++S+ +Q D + W G+V+S
Sbjct: 321 RAEQLCSLVPMP---YSALWEPYNVLDEHRFFVGVHISSEHQSLAACEDTINAWKGYVES 377
Query: 434 RFRSLILKLEEVQGLCDPNPTEYID----------VDVTEPHIVFYWGLQPGRTNLL--D 481
+ R + LE V + P P +D V V F++G++ G ++ D
Sbjct: 378 KLRMFVYALECVAEV-RPFPCPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNKDVAHSD 436
Query: 482 IVAVEKDFLKNIHNGFQG 499
+ + ++F + G G
Sbjct: 437 VESAFREFEFAVTEGTTG 454
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 187 EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSL 246
+++ +H ++DA VPL++F+ + I IDL + + + S+ + L+++D+ S S+
Sbjct: 614 KITNLHKIEDAYVPLIKFEINYISIDLLFTRVPLPSLSNLNLLD-DTLLKNMDDKSILSI 672
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP 306
+G R ++ LVP+++ F LR IK WAKRRG+YGN G+ GGV AILVA +CQ +P
Sbjct: 673 NGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAILVARICQYYP 732
Query: 307 KGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPAAGYPSETRSLMPIRL 354
T++ FF+ Y+ W WP PV+L+ DP + + ++ MPI
Sbjct: 733 NKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKV----HQTDRMHKMPIIT 788
Query: 355 PCSPHEYCHSNITRSTFYKIRTEFLR 380
P P N+T +T I E R
Sbjct: 789 PAYPSICSTHNVTNTTLGVINEELKR 814
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 45/218 (20%)
Query: 107 NVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPE 166
+ +Q ++ +V+ +VK V ++ L + I TYGSY LGV+G
Sbjct: 16 STLQLIQRVVIEFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGP------------ 63
Query: 167 FATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPEN 226
V DA VP+++ +F GI +DL +A L + S+P N
Sbjct: 64 ---------------------------VPDAFVPIIKLEFSGISLDLIFARLILPSIPLN 96
Query: 227 VDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLH 286
+D+ N +LR LD+ +SL+G R IL+LV + F+ LR IKLWA+RR +Y N+
Sbjct: 97 LDLKNNGYLRGLDDKEVRSLNGTRVTDQILELVAQQKTFRLALRAIKLWAQRRAIYSNIV 156
Query: 287 GFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
GF GGV A+LVA VCQ L +V F W
Sbjct: 157 GFPGGVAWAMLVARVCQ------LGDIVEKIFAKQLTW 188
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 14/229 (6%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWV---------KRVAWQRRLPKEQIAE 136
L+ + N L S+EE K+ +++ L+ I+ WV + + R+ P +E
Sbjct: 96 LLSYLKNCKLYVSSEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 155
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ +GSY LG++ SD+D + + P++ +A DFF ++ P+VS C++D
Sbjct: 156 RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYVRIA-DFFDKFPTIIGQMPQVSYFDCIRD 214
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
AKVPL+ +D + DL A + V V + + L+P ++ E S SL+G R N +
Sbjct: 215 AKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 274
Query: 257 QLVPD----LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
FQ +R ++LW KR+ +Y N GF GG++ ILVA+V
Sbjct: 275 SQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 323
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 176/400 (44%), Gaps = 43/400 (10%)
Query: 135 AETHATILTYGSYGL--GVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIH 192
A + +GS GL + GS+ D+ ALC + FF + R + ++
Sbjct: 63 AAAWTQVYVFGSSGLDAAITGSDIDLIALCSA---SVNTSFFFQTFPRSAEGR--LQDVV 117
Query: 193 CVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRAN 252
V A+VPL++F ++G+ +DL +A + + + P+ ++L FL + +++G+R
Sbjct: 118 VVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTI 177
Query: 253 KCILQLVP-DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLN 311
I + +P L+ + VLR +K WA +R VYGNL+ F GV LAI+VA CQ P
Sbjct: 178 LEIRRRLPLPLDAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSG 237
Query: 312 TLVANFFKTYAYWPW------PTPVMLQDPMLPAAGYPS---------ETRSLMPIRLPC 356
++ FF Y +W P ++ D A P + L P+ P
Sbjct: 238 VILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPPPWDAVWDAADLFPVLNPA 297
Query: 357 SPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYL 416
P + RS E LR + P + L+EP+ ++ FV V++
Sbjct: 298 RPTVNAAHAVGRSGLQLFLKELLRAEQLC--ALVP-MSYSALWEPYNILDEHRFFVGVHI 354
Query: 417 SASNQ------DDLGDWVGWVKSRFRSLILKLE---EVQGLCDP---NPTEYIDVDVTEP 464
S+ +Q D + W G+V+S+ R + LE EV+ P P + +
Sbjct: 355 SSEHQSLAACEDTINAWKGYVESKLRMFVYALECVAEVRPFSRPVVDEPPRVVTRRGVKV 414
Query: 465 HI---VFYWGLQPGRTNL--LDIVAVEKDFLKNIHNGFQG 499
H F++G++ G ++ D+ A ++F + G G
Sbjct: 415 HCRSRAFFFGVRNGNKDVEHSDVEAAFREFEFAVTEGTTG 454
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 170/375 (45%), Gaps = 33/375 (8%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
SL+ + ++ + +T+ + KR+ + +++++ ++ + +
Sbjct: 584 SLIDWVNDQAPLQTTQTQLKRQAALAQVQQVC---------------SEVLNQSVHLQVF 628
Query: 145 GSYGLGVHGSESDIDALC-LGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMR 203
GS L + + SDID LC L P A + FF L L + +H V DA+V ++
Sbjct: 629 GSELLKIAQAHSDIDVLCPLPPSLAL--DPFFDQLQTALSQVAQ--GVHLVTDARVTTLK 684
Query: 204 FKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLE 263
F G+ DL +H S P + + P + D SW+++ G + IL L +
Sbjct: 685 FNLQGVNFDL--LAVHHPSFPVPLHQVKPEAFQQFDPLSWQNMVGYLEGQKILALGNKVG 742
Query: 264 K--FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV---CQNHPKGSLNTLVANFF 318
+ F+ ++R I+LWA R+ + GN+ GF G + AIL A CQ +L L+ NFF
Sbjct: 743 QTLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQNFF 802
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
A W P+ LQ+ ++ + R MP+ P++ N+T+ST I+ E
Sbjct: 803 DLLAQHSWVIPIGLQEGT--SSYIVRKHRDWMPVVSAFYPYKNTTRNLTQSTAKVIQGEI 860
Query: 379 LRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
+ L +W F K+Y + + + LSASN+ +L G + +
Sbjct: 861 QKARLL---LQNTSINWLTFFAATDVQKEYTQLLILELSASNEQNLELAQGKLLGSLLGV 917
Query: 439 ILKLE-EVQGLCDPN 452
IL LE +V+ L P+
Sbjct: 918 ILALEQQVKALVRPS 932
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 14/229 (6%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWV---------KRVAWQRRLPKEQIAE 136
L+ + + L S EE K+ +++ L+ I+ WV + + R+ P +E
Sbjct: 39 LLSYLKDCKLYVSPEEARKKEAILRTLELIISDWVYETYKDAFMANMQFYRKQPNMPRSE 98
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ +GSY LG++ SD+D + + P++ +A DFF ++ P+VS C++D
Sbjct: 99 RLVRLYPFGSYYLGINEPSSDVDTVVVFPQYVRIA-DFFDKFPTIIGQMPQVSYFDCIRD 157
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
AKVPL+ +D I DL A + V + + + L+P ++ E S SL+G R N +
Sbjct: 158 AKVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 217
Query: 257 QLVPD----LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
FQ +R ++LW+KR+ +Y N GF GG++ ILVA+V
Sbjct: 218 SQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGINCIILVANV 266
>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
Length = 388
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 99/173 (57%), Gaps = 10/173 (5%)
Query: 75 LDQMDE-ERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQ 133
L Q DE E+ LS +L + +E R V+ KL + V AW+K+ ++
Sbjct: 164 LMQTDEVEKYLSDARLYERQ------DEAILREEVLGKLDQTVKAWIKKATRINGYGEQF 217
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
+ E +A T+GSY LGVHG ++DID LC+GP AT E FF LH++L PEVSE+H
Sbjct: 218 VHEANAKTFTFGSYCLGVHGPDADIDTLCVGPRHATRNEYFFRWLHDILAEMPEVSELHP 277
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR---DLDETSW 243
V DA VP++ FK +G+ IDL YA L +PE+ +++ + R D D S+
Sbjct: 278 VPDAHVPVLGFKINGVSIDLLYANLAHAVIPESREIMIHYKHRKDGDYDSRSY 330
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 188/438 (42%), Gaps = 56/438 (12%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGL--GVHGSE 155
S E D+ ++++L E +L + P A T + +GS GL + GS+
Sbjct: 37 SMENTDEVVRLVRQLLEKML---------QAEPSAAAAWTQ--VYVFGSSGLDAAITGSD 85
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPY 215
D+ ALC ++ FF + R + + V A+VPL++F ++G+ +DL +
Sbjct: 86 IDLIALCSASVNTSL---FFQTFPRSAEGR--LQNVVVVTSARVPLIKFSYNGVHVDLLF 140
Query: 216 ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDL-EKFQPVLRCIKL 274
A + + + P+ ++L FL + +++G+R I + +P L + VLR +K
Sbjct: 141 ASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLLLAAYACVLRAVKY 200
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPW------PT 328
WA +R VYGNL+ F GV LAI+VA CQ P ++ FF Y +W P
Sbjct: 201 WAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPV 260
Query: 329 PVMLQDPMLPAAGYPS---------ETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFL 379
++ D A P + L P+ P P + RS E L
Sbjct: 261 SIVPMDENAAIARVPGMPPPWDAVWDAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELL 320
Query: 380 RGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ------DDLGDWVGWVKS 433
R + + L+ P+ ++ FV V++S+ +Q + + W G+V+S
Sbjct: 321 RAEQLCALV---PMSYSALWAPYNILDEHRFFVGVHISSEHQSLAACEEAINAWKGYVES 377
Query: 434 RFRSLILKLEEVQGLCDPNPTEYID----------VDVTEPHIVFYWGLQPGRTNLL--D 481
+ R + LE V + P P +D V V F++G++ G ++ D
Sbjct: 378 KLRMFVYALECVAEV-RPFPRPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNNDVAHSD 436
Query: 482 IVAVEKDFLKNIHNGFQG 499
+ A ++F + G G
Sbjct: 437 VEAAFREFEFAVTEGTTG 454
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 17/267 (6%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWV---------KRVAWQRRLPKEQIAE 136
L+ + + L S EE K+ +++ L+ I+ WV + + R+ P +E
Sbjct: 39 LLSYLKDCKLYVSPEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 98
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ +GSY LG++ SD+D + + P++ + DFF ++ P+VS C++D
Sbjct: 99 RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYVRIV-DFFDKFPTIIGQMPQVSYFDCIRD 157
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
AKVPL+ +D + DL A + V V + + L+P ++ E S SL+G R N +
Sbjct: 158 AKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 217
Query: 257 QLVPD----LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT 312
FQ +R ++LW KR+ +Y N GF GG++ ILVA+V + S
Sbjct: 218 SQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANVML---RSSFEL 274
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPA 339
L ++ + + + + DP P+
Sbjct: 275 LQSDVEQKNMEYQLSSSITQNDPTNPS 301
>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
Length = 238
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 115/199 (57%), Gaps = 3/199 (1%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 25 PISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 84
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP+ I I T+GSY LGVH +DIDALC+ P + DFF ++ LK + EV
Sbjct: 85 LPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEV 143
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ V++A VP+++ FDGI ID+ +A L + ++PE++D+ + L++LD +SL+G
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 249 VR--ANKCILQLVPDLEKF 265
+R + C+LQ + D+ F
Sbjct: 204 MRKPTSFCVLQFLSDISCF 222
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 170/380 (44%), Gaps = 55/380 (14%)
Query: 160 ALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLH 219
ALC T+ FF L + + R + ++ V A+VPL++F + G+ +DL +A +
Sbjct: 7 ALCSASVNTTL---FFQKLPRLTEGR--LQDVVVVTSARVPLIKFSYKGVHVDLLFASVD 61
Query: 220 VLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP-DLEKFQPVLRCIKLWAKR 278
+ + P+ ++L FL + +++G+R I + +P L+ + VLR +K WA +
Sbjct: 62 MRTAPDTSELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQ 121
Query: 279 RGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDP-ML 337
R VYGNL+ F GV LAI+VA CQ P ++ FF Y +W +L+D M
Sbjct: 122 RQVYGNLYTFPNGVCLAIMVARACQFCPVADSGVILRFFFSLYVWW------LLRDTRMD 175
Query: 338 PAAGYPSETRS--------------------LMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
P + P E + L P+ P P + RS E
Sbjct: 176 PVSIVPKEEDAAIVRVPGMPPPWDAVWDAADLFPVLNPAQPTVNAAHAVGRSGLQLFFKE 235
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS------ASNQDDLGDWVGWV 431
LR + + L++P+ ++ FV V++S A+ +D + W G+V
Sbjct: 236 LLRAEQLCASV---PLSYSELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYV 292
Query: 432 KSRFRSLILKLEEV-------QGLCDPNPTEYIDVDVTEPHI---VFYWGLQPGRTNLL- 480
+S+ R L+ LE V + + D +P E VT H F++G++ G ++
Sbjct: 293 ESKLRMLVYSLECVAEVRPFPRPVVDESPREVTRSGVTM-HCRSRAFFFGVRNGNKDVAR 351
Query: 481 -DIVAVEKDFLKNIHNGFQG 499
D+ A +F ++ G G
Sbjct: 352 SDVEAAFSEFEFSVTEGTTG 371
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 114/265 (43%), Gaps = 39/265 (14%)
Query: 172 EDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL-HVLSVPENVDVL 230
+ FF + L +V+ ++ V A VP+++ KF G+ +D+ Y L H LS P +D
Sbjct: 4 DAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPA-IDPA 62
Query: 231 NPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLG 290
+ L +DE S +S++GVR + I VP F LR I+ WA+RRG+Y N G+LG
Sbjct: 63 DDNLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLG 122
Query: 291 GVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPW------------------------ 326
GV AILVA VCQ P + LV FF+ Y+ W W
Sbjct: 123 GVSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHK 182
Query: 327 ----PTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
P D LP A P M + P P +TR + I+ E RG
Sbjct: 183 VWCPPPKRTTTDQPLPLAASP------MAVITPAYPSMNSTFGVTRMSMDTIKKELERGA 236
Query: 383 NTTRDL---MRPDFDWHFLFEPFPY 404
+R W L EP +
Sbjct: 237 GIISSKGVDLRSRECWETLLEPIHF 261
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 287 GFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG 341
GFLGGV A+LVA CQ +P + +TLV FF ++ W WP PV+L+ P LP
Sbjct: 3 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62
Query: 342 ---YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFL 398
PS+ LMPI P P + N++ ST + EF +G T ++++ DW L
Sbjct: 63 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL 122
Query: 399 FEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
EP + +KY ++ + SAS +++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 123 LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 182
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 47/337 (13%)
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GS +GV + SD+D +C+ P T E F + N L + S++ VK A+VP++R
Sbjct: 636 GSGRIGVQSTHSDLDLICIIPVPLT-GETFLKQVQNRLAGLCDRSQL--VKSARVPVLRM 692
Query: 205 KFDGILIDLPYACLHVLS--VPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLV-PD 261
+ +G+ +DL A S + + PFF D SW + G+ I+ +V P
Sbjct: 693 EIEGVAVDLLSATTMGQSQIIEPLSEAARPFF----DAASWSAAVGILEADLIVDIVSPH 748
Query: 262 L--EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA-------HVCQNHPK----- 307
L + F +LR ++ WAK R ++GN GFLG A+L A + + P+
Sbjct: 749 LSWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSPRLLHSQ 808
Query: 308 ------GS-------------LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYP-SETR 347
G+ L+ L+A+FF+ + W P+ L + YP ++R
Sbjct: 809 ENDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPIALTE---GGKQYPVRKSR 865
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
P+ P + N+TRST +R E RG +++ + W LFE ++
Sbjct: 866 EWFPVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAEEVLAGNTAWTTLFESADLPEQ 925
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
F+ + +S++ +L GW++ L + LE+
Sbjct: 926 SNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQ 962
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 35/357 (9%)
Query: 109 IQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFA 168
+Q +++I L V+R + P EQ + +GS GL ++SD+D + P F
Sbjct: 43 LQLVEDIALRVVQRHITE---PTEQWVRAYP----FGSCGLAASVADSDLDIVLFCP-FK 94
Query: 169 TMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVD 228
A FF +L++ V V A+VP+++F +G L+DL + + + + P
Sbjct: 95 VTAAVFFHEFPLLLQT---VVGHVIVVAARVPVVKFAHEGTLVDLVFVSVALAAPPTTEQ 151
Query: 229 VLNPFFLRDLDETSWKSLSGVRANKCILQLVP-DLEKFQPVLRCIKLWAKRRGVYGNLHG 287
+L+ FL + + S++G+R I + +P + F VL+ +KLWA +R VYGNL+
Sbjct: 152 LLDDSFLLQVARETRHSVNGIRFTLEIKRRLPVTYDVFSTVLKVVKLWAMKRQVYGNLYT 211
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW--------PWPTPVMLQD----P 335
+ GV LAI+VA CQ P N ++ FF Y W P LQ P
Sbjct: 212 YPSGVVLAIMVARACQVMPASHPNVVLRFFFLFYTQWMSRHDRISPVYITTSLQGRGRVP 271
Query: 336 MLPAAGYPSETR---SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPD 392
+P P+ + L+P+ P P + + R +E R H+
Sbjct: 272 GMPEPWDPALEKFSHDLLPVLNPAYPFVNDANAVGRCGLEVFYSEVTRAHHLLS--TTES 329
Query: 393 FDWHFLFEPFPYSKKYARFVRVYLSASN------QDDLGDWVGWVKSRFRSLILKLE 443
F +++P+ + ++ F+ V +S ++DL W +V S+ R LI +E
Sbjct: 330 FPLEDVWKPYSITDDFSSFLLVQVSCDGNSEEGVENDLEVWSSYVASKLRILIYAVE 386
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 28/334 (8%)
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEI 191
+ E A +GS GL +ESD+D + P T + FF +L + V +
Sbjct: 59 QNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLT-TDIFFDEFPRLLYN--SVGPV 115
Query: 192 HCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
V A+VP+++F++ G +D+ + + + P +L+ FL + + S +G+R
Sbjct: 116 SVVA-ARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRF 174
Query: 252 NKCILQLVP-DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
I + +P + F VL+ +KLWA RR VYGN++ + G LAI+VA VCQ P
Sbjct: 175 TFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHP 234
Query: 311 NTLVANFFKTYAYW----PWPTPVML--------QDPMLPAAGYPSETR---SLMPIRLP 355
+TL+ FF Y W +PV L + P LP + PS+ + L P+ P
Sbjct: 235 STLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKDKICCDLFPVISP 294
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY 415
P+ S++ R + +E R ++ ++EP+ ++Y+ F+ V
Sbjct: 295 AYPYVNDASSVGRCGLEALYSEITRVQCILTEVR--TLPLEEMWEPYRIEEEYSTFLVVG 352
Query: 416 LS------ASNQDDLGDWVGWVKSRFRSLILKLE 443
+S A + L W +V SR R LI +E
Sbjct: 353 VSCAGHSMAETEQALSVWSSYVASRLRILIYSIE 386
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 166/368 (45%), Gaps = 38/368 (10%)
Query: 97 PSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
PS EE +R+ + +KE+V +R A LP + ++ GSYG GV S S
Sbjct: 600 PSNEEITQRQEAFELIKELV---NRRDA---NLPAGTRLDLLFEVVAVGSYGFGVWNSSS 653
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
D+D L +G FF ++ L+ + +V + VK A ++ + G+ +DL
Sbjct: 654 DMDILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQ 710
Query: 215 Y--ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
Y A V S P+ +++ DL S L+ +R + + +PDL F+ R I
Sbjct: 711 YCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFI 770
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVC----QNHPKGSLNTLVANFFKTYAYWPWPT 328
K+WA+RRG+Y + G+LGG+H+ +L+A +C + S ++ FFK YA + W
Sbjct: 771 KIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEK 830
Query: 329 PVMLQDPMLPAAGYPSETRSLMPIRLP---CSPHEYCHSNITR-STFYKIRTEFLRGHNT 384
V+ DP Y S R P R P S H+ N+ R ++ RT
Sbjct: 831 QVVY-DPSF----YKSPPRYFRPQREPLVILSQHQ-PKVNVARAASIPSTRTLVQEFQRA 884
Query: 385 TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW----------VGWVKSR 434
+ L + D W L S F++ Y S + + ++ W VGW++ R
Sbjct: 885 DKLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYA-KVNVQYWGGAATKGRMLVGWLEWR 943
Query: 435 FRSLILKL 442
SL++ +
Sbjct: 944 CVSLLVDI 951
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 153/334 (45%), Gaps = 28/334 (8%)
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEI 191
+ E A +GS GL +ESD+D + P T + FF +L + V +
Sbjct: 59 QNTQEQWARAYPFGSCGLSASVAESDLDVALICPSVLT-TDIFFDEFPRLLYN--SVGPV 115
Query: 192 HCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
V A+VP+++F++ G +D+ + + + P +L+ FL + + S +G+R
Sbjct: 116 SVVA-ARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRF 174
Query: 252 NKCILQLVP-DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
I + +P + F VL+ +KLWA RR VYGN++ + G LAI+VA VCQ P
Sbjct: 175 TFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHP 234
Query: 311 NTLVANFFKTYAYW----PWPTPVML--------QDPMLPAAGYPSETR---SLMPIRLP 355
+TL+ FF Y W +PV L + P LP + PS+ + L P+ P
Sbjct: 235 STLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKDKICCDLFPVISP 294
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY 415
P+ S++ R + +E R + ++EP+ ++Y+ F+ V
Sbjct: 295 AYPYVNDASSVGRCGLEALYSEITRVQCILTEAR--TLPLEEMWEPYRIEEEYSTFLVVG 352
Query: 416 LS------ASNQDDLGDWVGWVKSRFRSLILKLE 443
+S A + L W +V SR R LI +E
Sbjct: 353 VSCAGHSMAETEQALSVWSSYVASRLRILIYSIE 386
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 153/334 (45%), Gaps = 28/334 (8%)
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEI 191
+ E A +GS GL +ESD+D + P T + FF +L + V +
Sbjct: 59 QNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLT-TDIFFDEFPRLLYN--SVGPV 115
Query: 192 HCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
V A+VP+++F++ G +D+ + + + P +L+ FL + + S +G+R
Sbjct: 116 SVVA-ARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRF 174
Query: 252 NKCILQLVP-DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL 310
I + +P + F VL+ +KLWA RR VYGN++ + G LAI+VA VCQ P
Sbjct: 175 TFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHP 234
Query: 311 NTLVANFFKTYAYW----PWPTPVML--------QDPMLPAAGYPSETR---SLMPIRLP 355
+TL+ FF Y W +PV L + P LP + PS+ + L P+ P
Sbjct: 235 STLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKDKICCDLFPVISP 294
Query: 356 CSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY 415
P+ S++ R + +E R + ++EP+ ++Y+ F+ V
Sbjct: 295 AYPYVNDASSVGRCGLEALYSEITRVQCILTEAR--TLPLEEMWEPYRIEEEYSTFLVVG 352
Query: 416 LS------ASNQDDLGDWVGWVKSRFRSLILKLE 443
+S A + L W +V SR R LI +E
Sbjct: 353 VSCAGHSMAETEQALSVWSSYVASRLRILIYSIE 386
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 143/316 (45%), Gaps = 48/316 (15%)
Query: 235 LRDLDETSWKSLSGVRANKCILQLV--PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L D D +SL+G R + +L LV LE+FQ VL +K WA+ +GVY N+ GF GGV
Sbjct: 318 LCDQDPAGVRSLNGARVTQTLLDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGFWGGV 377
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD--------PMLPAAGYPS 344
+ AILVA+VC+ +P+ S+ V FF+T+A W WPTPV L D P AA PS
Sbjct: 378 NWAILVAYVCRAYPESSIADTVQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVLPS 437
Query: 345 --------ETRSLMPIRLPCSPHEYCHSNIT-----------RSTFYKIRTEFLRGHNT- 384
+ + PI P P N+ + T +KI R H T
Sbjct: 438 WNPAIHIRDGLHVCPILTPAYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHTTY 497
Query: 385 TRDL-MRPDFDWHFLFE-PFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKL 442
R + +R WH L+ + ++ +V + A + W V+SR R LI L
Sbjct: 498 NRGVPVRRKIPWHRLWSLNAGWVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVLISSL 557
Query: 443 EEVQGLCDPN-----------PTEYIDVDVTEPHIVFYWGLQ-PGRTNLLDIVAVEKDFL 490
E P+ P + ++ + E H F+ GL+ + D+ + DFL
Sbjct: 558 ETPDSHAWPHGRFFYRNVPIAPYDELN-GLREAH--FFIGLRFASHVDTADVRTLTLDFL 614
Query: 491 KNIHNGFQGSPGRMGL 506
+ + NG+ G M L
Sbjct: 615 RQV-NGWIGRDSSMDL 629
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQ-----RRLPKEQIAETHATILTYGSYGLGVHG- 153
+EE RR+ + L ++ W +A + ++Q++ + TI+ +GSY LGVH
Sbjct: 116 QEERVRRDAMDDLTRLLAQWAGTLAASVMTSTSGMSRDQLS-VYPTIVPFGSYRLGVHRP 174
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLK-----SRPEVSEIHCVKDAKVPLMRFKFDG 208
SD+D L + P + E FF +L S+ ++IH + A P+++ ++
Sbjct: 175 GSSDLDVLVIAPPHCSRNE-FFTSFVELLSTPANGSQNTFTQIHAIPTAYTPVLKCQYAS 233
Query: 209 IL 210
L
Sbjct: 234 SL 235
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 166/368 (45%), Gaps = 38/368 (10%)
Query: 97 PSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
PS EE +R+ + +KE+V +R A LP + ++ GSYG GV S S
Sbjct: 600 PSNEEITQRQEAFELIKELV---NRRDA---NLPAGTRLDLLFEVVPVGSYGFGVWNSSS 653
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
D+D L +G FF ++ L+ + +V + VK A ++ + G+ +DL
Sbjct: 654 DMDILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQ 710
Query: 215 Y--ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
Y A V S P+ +++ DL S L+ +R + + +PDL F+ R I
Sbjct: 711 YCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFI 770
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVC----QNHPKGSLNTLVANFFKTYAYWPWPT 328
K+WA+RRG+Y + G+LGG+H+ +L+A +C + S ++ FFK YA + W
Sbjct: 771 KIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEK 830
Query: 329 PVMLQDPMLPAAGYPSETRSLMPIRLP---CSPHEYCHSNITR-STFYKIRTEFLRGHNT 384
V+ DP Y S R P R P S H+ N+ R ++ RT
Sbjct: 831 QVVY-DPSF----YKSPPRYFRPQREPLVILSQHQ-PKVNVARAASIPSTRTLVQEFQRA 884
Query: 385 TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW----------VGWVKSR 434
+ L + D W L S F++ Y S + + ++ W VGW++ R
Sbjct: 885 DKLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYA-KVNVQYWGGAATKGRMLVGWLEWR 943
Query: 435 FRSLILKL 442
SL++ +
Sbjct: 944 CVSLLVDI 951
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 167/380 (43%), Gaps = 38/380 (10%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR--RLPKEQIAETHATILT 143
L+Q + + PS EE +R+ V+ ++++V QR LP + ++
Sbjct: 560 LMQSLWDHNAFPSPEEIRQRQEVVDLIRQVVN--------QRDPNLPTDTRLRFSFAVVP 611
Query: 144 YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS--RPEVSEIHCVKDAKVPL 201
GSYGLGV S SDID L +G A FF ++ L+ E+ + VK A +
Sbjct: 612 VGSYGLGVWNSSSDIDLLVIG---QLSARTFFALMVAKLRKAIHGEIKILRKVKAASGVM 668
Query: 202 MRFKFDGILIDLPY--ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLV 259
+ + G+ +DL Y A V S P+ +D+ + L S L+ +R + + +
Sbjct: 669 LELEARGVRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLLKLNPLRDMHYLQRTI 728
Query: 260 PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC----QNHPKGSLNTLVA 315
PDL F+ R IK WA+RRGVY G+LGG+H+ +L++ VC Q S ++
Sbjct: 729 PDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLSFQKAGPLSAADMIC 788
Query: 316 NFFKTYAYWPWPTPVMLQDPML--PAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYK 373
FF+ YA + W ++ DP A Y +R + I +P + +
Sbjct: 789 TFFRHYAQFQWDRTIVY-DPGFYKTAPRYFRTSREPIVILTQNTPKVNVARAASLPSART 847
Query: 374 IRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW------ 427
+ EF R R L P+ W L S F+ Y S + ++ W
Sbjct: 848 LEQEFKR---MDRQLASPEITWAGLLGAAGSSSGVEDFLTSYPSYAKV-NVQYWGAGAAK 903
Query: 428 ----VGWVKSRFRSLILKLE 443
VGW++ R SL++ ++
Sbjct: 904 GRLLVGWLEWRCVSLLVDIQ 923
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 169/380 (44%), Gaps = 44/380 (11%)
Query: 97 PSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
PS EE +R+ + +KE+V +R A LP + ++ GSYG GV S S
Sbjct: 600 PSNEEITQRQEAFELIKELV---NRRDA---NLPAGTRLDLLFEVVPVGSYGFGVWNSSS 653
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
D+D L +G FF ++ L+ + +V + VK A ++ + G+ +DL
Sbjct: 654 DMDILVIG---QVSPRTFFALIIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQ 710
Query: 215 Y--ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
Y A V S P+ +++ DL S L+ +R + + +PDL F+ R I
Sbjct: 711 YCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFI 770
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVC----QNHPKGSLNTLVANFFKTYAYWPWPT 328
K+WA+RRG+Y + G+LGG+H+ +L+A +C + S ++ FFK YA + W
Sbjct: 771 KIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEK 830
Query: 329 PVMLQDPMLPAAGYPSETRSLMPIRLP---CSPHEYCHSNITR-STFYKIRTEFLRGHNT 384
V+ DP Y S R P R P S H+ N+ R ++ RT
Sbjct: 831 QVVY-DPSF----YKSPPRYFRPQREPLVILSQHQ-PKVNVARAASIPSTRTLVQEFQRA 884
Query: 385 TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW----------VGWVKSR 434
+ L + D W L S F++ Y S + + ++ W VGW++ R
Sbjct: 885 DKLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYA-KVNVQYWGGAATKGRMLVGWLEWR 943
Query: 435 FRSLILKLEEVQGLCDPNPT 454
SL++ G P PT
Sbjct: 944 CVSLLV------GRLHPLPT 957
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 29/324 (8%)
Query: 144 YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMR 203
+GS GLG ++SD+D + L F AE FF +L+ P V + V A+VP+++
Sbjct: 71 FGSCGLGASVADSDLD-IVLFCSFKVTAEVFFREFPPLLQ--PVVGNVVLVP-ARVPVVK 126
Query: 204 FKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP-DL 262
F + G +D+ + + + P +L+ FL + + S++G+R + + +P
Sbjct: 127 FSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHSVNGLRTVLEVKRRLPVAY 186
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA 322
+ F VL+ +KLWA RR VYGNL+ + GV LAI+VA +CQ P N L+ FF Y
Sbjct: 187 DVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYT 246
Query: 323 YW----PWPTPVMLQD--------PMLPAAGYPSETR---SLMPIRLPCSPHEYCHSNIT 367
W +PV + P LP + P L+P+ P P+ N+
Sbjct: 247 QWLSRHDRISPVYITTSLESRGRIPGLPDSWDPRRDACRDDLLPVINPAYPYVNDARNVG 306
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDD---- 423
R + E + +L P ++EP+ Y+ F V+++ +++
Sbjct: 307 RCSLEVFYAELTYAYRLLSNLETP---LEAIWEPYHILDDYSTFFVVHVTCEEENEEKLE 363
Query: 424 --LGDWVGWVKSRFRSLILKLEEV 445
L W +V S+ R L+ LE +
Sbjct: 364 AVLSVWSSYVLSKLRILLYALERI 387
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 34/261 (13%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHA--TIL 142
+L+QL G++PS EEE R+ + L+ + + ++ A I+
Sbjct: 616 ALIQL----GVIPSQEEEATRKQAVDLLRNTITDVIASTV------PSGLSRFQAPIVIV 665
Query: 143 TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP--EVSEIHCVKDAKVP 200
GSYGLGV S SD+D LC+GP F+ A+ FF ++ L+ P ++ I V+
Sbjct: 666 PVGSYGLGVWTSSSDLDVLCIGP-FS--AQTFFALVTRALRKVPPQDIKIIRRVRANTGT 722
Query: 201 LMRFKFDGILIDLPYACLHVLSVPEN-VDVL-----NPFFLRDLDETSWKSLSGVRANKC 254
++ + GI DL C ++ E DVL +P + DL S L VR
Sbjct: 723 MLELEIHGIKTDL--QCCPATTIAERWGDVLRTAPNDPVW--DLSPQSLLKLKAVRDMDY 778
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPKG--- 308
+ + VP++ F+ R I+ WAK RGVY + GFL G+ +AILVA V + N+P
Sbjct: 779 LRRTVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAILVARVAKLLANNPDVKTP 838
Query: 309 -SLNTLVANFFKTYAYWPWPT 328
++ + FF YA +PW T
Sbjct: 839 ITVEDFLVTFFTHYASFPWST 859
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 33/350 (9%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRL--PKEQIAETHATIL 142
SL + ++P+ + KR++V+ L++++ A P+ IA ++
Sbjct: 614 SLELCLRESMMLPTEADVSKRQSVVDLLRDVITQGPAARAGDGSGNNPEPNIA---MVLV 670
Query: 143 TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKVP 200
GSYGLGV SDID L +GP ++ FF V L+ + + + VK A
Sbjct: 671 PVGSYGLGVWSPSSDIDCLVIGP---ISSKTFFAVAEKRLRKATDLGIRILRRVKAATGT 727
Query: 201 LMRFKFDGILIDLPYA-CLHVLSVPENVDVLNP----FFLRDLDETSWKSLSGVRANKCI 255
++ + +GI DL Y V+ + + +L P F+L + L R I
Sbjct: 728 MLELEVEGIKCDLQYCPASRVVEAWQRISLLPPDDSTFYL---SSQALTKLQAFRDVDYI 784
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ-NHPKGSLNT-- 312
+ +PDL F+ R I LWAKRRG+Y G+LGG+H+ ++++ VC+ + KG +
Sbjct: 785 RRSIPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMMLSRVCKLSCRKGGATSMD 844
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAA----GYPSETRSLMPIRLPCSPHEYCHSNITR 368
++ FFK Y + W ++ A Y +E ++ I P NI R
Sbjct: 845 MICRFFKYYTNFDWEREILCDPSFFKDAPRYRRYANEPMVILTIHTPL-------VNIAR 897
Query: 369 STFYKIRTEFLRGHNTTRDLMR-PDFDWHFLFEPFPYSKKYARFVRVYLS 417
S ++ +L+ PD W L S F++ Y S
Sbjct: 898 SASKASTRTIIKELQRMDELISTPDMSWSGLVGNITASDSSQEFLKTYTS 947
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 13/291 (4%)
Query: 96 VPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSE 155
+P + D R I L+EI+L + V P + GSY LGVHG +
Sbjct: 641 MPCKTDRDAREAAITSLREILLQEQESVLGVGFKPSR--GAIPIILAPVGSYALGVHGRD 698
Query: 156 SDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVK--DAKVPLMRFKFDGILIDL 213
SDID LC+ A+ FF V ++ I + D+KVP++ K I DL
Sbjct: 699 SDIDCLCVS---TISAKTFFEVARKRIRRFGGERGIRLTRFVDSKVPVLEVKVGNIKFDL 755
Query: 214 PYA-CLHVLSVPENVDVLNPF-FLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRC 271
Y L ++ + +L P + L + KSL+ R + +L+ +P++ F+ R
Sbjct: 756 QYCQSLAIIEHWSAIPLLPPNDSVFSLPASGLKSLNSYRDTEFLLRTIPNINVFRLAHRF 815
Query: 272 IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPKG-SLNTLVANFFKTYAYWPWP 327
IK+WA GV+ + G+LGG H+ +L+A +C+ PK + +V FF Y+ W
Sbjct: 816 IKIWALASGVFSSRFGYLGGFHITLLLARICKLADGDPKDVTAAKIVRLFFAYYSKTEWL 875
Query: 328 TPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
T ++ A Y +R M + +P N TR + + EF
Sbjct: 876 TEIICDPEFSAGASYQRFSREPMAVTSIYAPVVNVARNATRHSVSALTREF 926
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 19/247 (7%)
Query: 89 LMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYG 148
L+ ++PS EE R + + ++ V V + RL ++ GSYG
Sbjct: 598 LLYGLNMIPSEEEFAHRHQMFKLIESAVHQRVFDATVETRL------NISFVVVPVGSYG 651
Query: 149 LGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC---VKDAKVPLMRFK 205
LGV + SDID L +G T++ F+ L RPE EIH +K A ++ +
Sbjct: 652 LGVWDTSSDIDCLVIG----TISPRTFMALMVQKLRRPEWQEIHILRKIKAASGTMLELQ 707
Query: 206 FDGILIDLPYACLHVL--SVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLE 263
G+ DL Y + S P+ +++ + DL S L+ VR + + + +PDL
Sbjct: 708 AGGVGFDLQYCAATSVAESWPKALELPSSDSTFDLPMQSLLKLNAVRDLEYLQRTIPDLA 767
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT----LVANFFK 319
F+ R IK WAK RG+Y + G+LGG+H+ +L+A VC+ + S T ++ FF
Sbjct: 768 TFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITLLLALVCKLSFRESGATHESDILCTFFS 827
Query: 320 TYAYWPW 326
YA++ W
Sbjct: 828 YYAHFDW 834
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 276 AKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDP 335
A +RG+Y N+ G+LGGV+ A+L + +P + + ++ N F+ +A W W PV+++D
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 336 ML-PAAGY------PSETR----SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT 384
L P G+ P E L PI PC P + N+ ST + EF R +
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 385 TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
T +++ + W LF+ FP+ Y ++++ +SA + +W G+V+S+ R +E
Sbjct: 229 TLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMIE 287
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
L S E D R +++ L+ I+ VK++ + L Q E A++ T+GS+ + VH
Sbjct: 7 LYESKNEIDHREELLKSLQSILRECVKKILTAKNLYSNQEPEELASLYTFGSFRMMVHEP 66
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKV 199
+DID +C+GP T E+FF V+ + L+ E C D V
Sbjct: 67 WADIDTMCVGPGSVTR-EEFFSVVSSALQ-----GEETCATDVNV 105
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 161/399 (40%), Gaps = 53/399 (13%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P L +DE +V + N L+PS+E+ R+ V L +I+ + R
Sbjct: 593 PDALSSLDE-----IVACLENSSLLPSSEDLKSRKAVAATLAQILTEPI-------RDSS 640
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVS 189
+ +T ++ GSYGLG +SD+D LC+G A + FF + L+ S +
Sbjct: 641 GRDIKTPLVLIPVGSYGLGTWSPDSDVDCLCIG---AISSTTFFSLAIQRLRKASALGIR 697
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYA--------CLHVLSVPENVDVLNPFFLRDLDET 241
+ VK A ++ + I +DL Y V +P N +P F DL
Sbjct: 698 IMRKVKAATGMMLELQSGNIKLDLQYCPAANIAERWQEVSRIPSN----DPIF--DLSLH 751
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
S L R + I ++VPD+ F+ RCI WAK GVY + G LGG+H+ ++++ +
Sbjct: 752 SLSKLQPYRDQEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITMMLSRL 811
Query: 302 CQ----NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCS 357
Q + ++ LVA FF YA++ W +++ + + Y R M I
Sbjct: 812 HQLLHGKVGRVTIPELVAMFFHHYAHFDWKNSMVVSPGV--QSRYRRSMREPMVILTVHV 869
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS 417
P +T + I + F R L W + S +L
Sbjct: 870 PTVNVARAVTAHSLRTIASAFKRAEEL---LAENGARWSNILRDTSISHNKETGAEKFLG 926
Query: 418 ASNQ-------------DDLGDWVGWVKSRFRSLILKLE 443
A N VGW++SRF L+ L+
Sbjct: 927 AHNSYIKVNVQYWGPSPTQASSLVGWIESRFFRLLNDLD 965
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 166/384 (43%), Gaps = 43/384 (11%)
Query: 96 VPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK----EQIAET---HAT-------- 140
+P+TE+E ++ +++++ A V+R + + + + + +ET AT
Sbjct: 552 LPTTEQEQNMAAALELVRQVICAPVERSSQAQEVTQGAHDQNSSETVPERATPRPDVVLK 611
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE---------VSEI 191
+ GSY LGVH ESDID L +G + F+++ + L ++ + V
Sbjct: 612 LEAVGSYALGVHTCESDIDCLAVG---NISPQTFWLLARSRLLAQAKQQTGTGTTVVKLR 668
Query: 192 HCVKDAKVPLMRFKFDGILIDLPYACLHVL-----SVPENVDVLNPFFLRDLDETSWKSL 246
VKDA V +M + GI IDL Y L +PE + V +P F L +S +L
Sbjct: 669 RFVKDAAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPE-IPVDSPLFA--LPASSLVTL 725
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP 306
S R + +++P L F R +KL+ RRG+ G G+LGG HL +L+ V P
Sbjct: 726 SAYRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLP 785
Query: 307 KGSLNT---LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCH 363
+ + LV F + YA W W + P A G + R + +
Sbjct: 786 HSAGRSAPHLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAYKRVVQREPMAVLSISKPQ 845
Query: 364 SNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFP---YSKKYARFVRVYLSASN 420
NI + + G T ++ W + P + +Y FV++ +
Sbjct: 846 KNIASNASWNSVASLSHGLQTANATLQSGGTWLDVCGTNPLKSFIDEYRSFVKIEVHYWG 905
Query: 421 QDDLGD--WVGWVKSRFRSLILKL 442
D + +GW++S+ SL+++L
Sbjct: 906 GDCMQGRALMGWLESKIVSLLVQL 929
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
Query: 99 TEEEDKRRNVI-QKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
TEEE KRR ++ +L +V +V R+ ++ L + + I T+GSY LGVHG SD
Sbjct: 12 TEEEAKRREIVLGRLASLVKRFVTRIGIKQGLSQAAAEASGGKIFTFGSYRLGVHGPGSD 71
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYAC 217
ID LC+ P+ + EDFF MLK+ V E V DA VP+++ K GI IDL A
Sbjct: 72 IDTLCVVPKHVSR-EDFFEDFEEMLKATEGVDEASAVPDAYVPIIKTKISGIPIDLLMAR 130
Query: 218 LHVLSVPENVDVLNPFFLRDLDE 240
L + S+P+ + + + LR+LDE
Sbjct: 131 LALSSIPDTLTLQDDNLLRNLDE 153
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTPVML---QDPMLPA-----AGYPSETRSLMPIRLPC 356
+P +V+ FF W WP PV+L ++ LP YP++ MPI P
Sbjct: 157 YPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPA 216
Query: 357 SPHEYCHSNITRST-------FYKIRTEF---------LRGHNTTRDLMRPDFDWHFLFE 400
P N+T ST F K + EF L G ++ DW LF
Sbjct: 217 YPSMCATHNVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSADWSELFS 276
Query: 401 PFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ KY +++V S + + W G V+SR R L++KLE V L +P
Sbjct: 277 KHDFFHKYRYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLEYVDSLTLAHP 329
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus
heterostrophus C5]
Length = 1226
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 165/391 (42%), Gaps = 66/391 (16%)
Query: 94 GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT-----ILTYGSYG 148
G++P+ E+ +R+ L+ IV + AET + I+ GSY
Sbjct: 623 GMIPNDEQTTQRQEAFALLQRIVS------------DTSEDAETGQSGIPLVIVPVGSYA 670
Query: 149 LGVHGSESDIDALCLGPEFATMAEDFFVVLHNML--KSRPEVSEIHCVKDAKVPLMRFKF 206
LGV S SDID LC+G + ++ FF + L P+V + V+ A ++
Sbjct: 671 LGVWTSSSDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKVEAATGTMLELSI 727
Query: 207 DGILIDLPYA----CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDL 262
+GIL+DL Y + S + +P F +L S + L R + + +P
Sbjct: 728 NGILMDLQYCPAAQVVERWSELAEIPASDPIF--NLSMLSLRKLKPYRDLLYLQRTIPSR 785
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN--HPKGSLNT--LVANFF 318
F+ R IKLWA +RG+Y G+LGG+H+ ++++ VC++ H GS++ +V +FF
Sbjct: 786 SIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHNVGSVSIADIVVSFF 845
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
+ YA + W M+ D P RS + S H + +ST ++T
Sbjct: 846 QHYANFDWSND-MVYDAFFHKKK-PRYNRSAREPMVILSFHAPNSNFAQKSTVPGLQTLI 903
Query: 379 LRGHNTTRDLMRPDFDWHFLF--------EP-FPYS-----KKYARFVRVYLSASNQDDL 424
L P W F EP PY Y FV++ D+
Sbjct: 904 KELKAADMKLSEPGMTWQKFFSTSSDLASEPRLPYGAVEFLNTYNDFVKI--------DI 955
Query: 425 GDW----------VGWVKSRFRSLILKLEEV 445
W VGWV+SR S+++ + +
Sbjct: 956 QFWGRMLAKGKSLVGWVESRCISIVVDIHKA 986
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 173/401 (43%), Gaps = 64/401 (15%)
Query: 84 LSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT--- 140
+SL ++ + ++P+ ++ + R+ + LK +VL + + + HA+
Sbjct: 605 ISLQSMLYRQDMIPTEKQMEVRQQAFELLKNVVLGTIDK-------------QDHASSGV 651
Query: 141 ---ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF-VVLHNMLKSRPEVSEIHCVKD 196
++ GSY LGV ++SD+D LC+G + ++ FF +V + ++R +I +
Sbjct: 652 SLNMVAVGSYALGVWTADSDLDCLCVG---SVSSKTFFKLVRQRLARARNRGIKILRKVE 708
Query: 197 AKV-PLMRFKFDGILIDLPYA----CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
AK ++ DGI DL Y S + +P F +L S + L R
Sbjct: 709 AKTGTMLELSVDGISADLHYCPAARIAERWSEFHGLSASDPIF--NLPALSLRKLKSYRD 766
Query: 252 NKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN--HPKGS 309
I + +P L F+ RCIKLWA +RG+Y + G+L G H+ +++ +C+ + GS
Sbjct: 767 FLYIQRTLPSLSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITLMLTWICKKLRYQSGS 826
Query: 310 LN--TLVANFFKTYAYWPWPTPVMLQDPMLPAA--GYPSETRSLMPIRLPCSPHEYCHSN 365
+ +V +FF YA + W T +L D + Y R M I +PH
Sbjct: 827 VGPPDMVVSFFSYYANFDW-TNELLFDAFFHESRPRYHRSAREPMVILGYHAPHSNIAHT 885
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLG 425
T + EF + L P W F P S K + V+++LS + L
Sbjct: 886 STTPGLQILMNEFRAAADV---LSSPGITWAKFFGD-PSSLKDS--VQLHLSQMTEHFLA 939
Query: 426 D-----------W----------VGWVKSRFRSLILKLEEV 445
W VGW++SR SL++ + ++
Sbjct: 940 TQHSFVTVEMQYWGRTLAKGKGLVGWIESRCLSLVVDIHKM 980
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 38/264 (14%)
Query: 82 RSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATI 141
R S+ + + G +PS EE +R + LK ++L P + A T +++
Sbjct: 594 RPGSVKEALVELGAIPSAEETAQREAALDLLKSVLL----------DTPAAKSAGTKSSL 643
Query: 142 -----LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVSEIHCV 194
+ GSY L V S SDID LC+GP F+T +FF + L+ + + + V
Sbjct: 644 SPVVVVPVGSYALDVWTSSSDIDVLCIGP-FST--HNFFALASQRLRKAAGQGIRILRRV 700
Query: 195 KDAKVPLMRFKFDGILIDLPYACL--------HVLSVPENVDVLNPFFLRDLDETSWKSL 246
+ ++ + DGI +DL Y HVL P + V + L + L
Sbjct: 701 RANTGTMLEIEVDGIKMDLQYCPATSVAERWPHVLQTPASDPVWS------LSAQTLSKL 754
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV----C 302
VR I + VPDL F+ R IK WAK RG+Y GFL G+ ++IL+A V
Sbjct: 755 KAVRDVDYIRRSVPDLAAFRLAHRFIKTWAKSRGIYSARFGFLSGIQISILLARVQKLLA 814
Query: 303 QNHPKGSLNTLVANFFKTYAYWPW 326
+ S+ L+A FF YA + W
Sbjct: 815 RESGPCSVEDLLATFFTHYAAFDW 838
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 158/345 (45%), Gaps = 32/345 (9%)
Query: 195 KDAKVPLMRFKFDGILIDLPYACL--HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRAN 252
K + VP+M + DG+ +D+ +A L + +PE +D+L+ LR++ E + SL+G R
Sbjct: 4 KYSFVPIMTMEIDGVSVDISFASLPSYPFKLPEFLDILSNDILRNVSEHTLHSLTGCRCT 63
Query: 253 KCILQLVPD---LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
+ ++Q + L+ F+ I+ + K+ +Y N+ G+LGGV++ IL+A N +
Sbjct: 64 EFVIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLAST--NLLEND 121
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPML--PAAGYPSETRSLMP----------IRLPCS 357
T +FF + + ++ P L P G+ E S P + P
Sbjct: 122 FLTNTFHFFH-FVADHLGSEIIAMTPQLSFPELGFDEENWSDKPSNFSNHDSLVLLTPTY 180
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLS 417
P I+RS+ IR++ R + + + + + EP+ + + + + V +S
Sbjct: 181 PRMNTARTISRSSLQFIRSQARRVYEKIKSYVDGESTLLQMVEPYQFFEGFPIYFEVLVS 240
Query: 418 ASNQDDLGDWVGWVKSRFRSLI----LKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQ 473
AS + DW+G V+S+ R L+ L++E V +PNP I FY GL
Sbjct: 241 ASANSEFKDWLGLVESKIRYLVFFLSLRIENVA--LNPNP---IVSKSNSNAACFYIGLT 295
Query: 474 PGRT--NLLDIVAVEKDFLKNIHNGFQGSPGRMGLLVVQASQLSK 516
T LD+ DF+ +I Q R+GL + +L +
Sbjct: 296 VDLTKATTLDLSQCVNDFI-DIVRLQQPKTARLGLRIRYREELKE 339
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Query: 144 YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMR 203
+GS GLG ++SD+D + L F AE FF +L+ P V + V A+VP+++
Sbjct: 71 FGSCGLGASVADSDLD-IVLFCSFKVTAEVFFREFPPLLQ--PVVGNVVLVP-ARVPVVK 126
Query: 204 FKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP-DL 262
F + G +D+ + + + P +L+ FL + + S++G+R + + +P
Sbjct: 127 FSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHSVNGLRTVLEVKRRLPVAY 186
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA 322
+ F VL+ +KLWA RR VYGNL+ + GV LAI+VA +CQ P N L+ FF Y
Sbjct: 187 DVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYT 246
Query: 323 YW 324
W
Sbjct: 247 QW 248
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 17/193 (8%)
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
LWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 12 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 71
Query: 334 ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG 381
+P + Y + LMPI P P N++ ST I E RG
Sbjct: 72 PIEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRG 127
Query: 382 HNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+ + W LF ++K Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 128 GDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVG 187
Query: 441 KLEEVQGLCDPNP 453
L+ + +P
Sbjct: 188 ALDRKATIAIAHP 200
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 32/255 (12%)
Query: 144 YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMR 203
+GS+GLG + ++D+ L L + DFF +LK + ++ I + + +R
Sbjct: 43 FGSFGLGGY-IKNDVVELALVCPYQIHRSDFFKFFPELLKEQSLINNI----EVNISFIR 97
Query: 204 FKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKC-ILQLVP-D 261
K + V ++ L+ L+D+D+ S ++ G R N+ Q+ P +
Sbjct: 98 LKLE--------------RVTHRINFLDNSLLQDMDDASLATMDGPRLNQFNKSQIKPSN 143
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV---CQNHPKGSLNTLVANFF 318
+ FQ L+CIK WA +RG+Y G+L +L+ Q+ K S+ ++ NFF
Sbjct: 144 VRLFQVSLQCIKYWAIQRGLYNAEIGYLNETACTLLLIKTFMFIQSKEKLSITIILQNFF 203
Query: 319 KTYAYWPWPTPVMLQDPM-------LPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTF 371
+ ++ WPW TPV+L + + L + +++MPI PC P +T+ T
Sbjct: 204 QMWSKWPWKTPVILTNHIPDKNGNKLEYSSITGSQKAMMPIISPCYPVYSVTPYVTKLTQ 263
Query: 372 YKIRTEFLRG-HNTT 385
I+ EF RG HN T
Sbjct: 264 KTIQLEFERGNHNHT 278
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 36/290 (12%)
Query: 63 VPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKR 122
VP N L V ++ E L + N G +P+ +E R ++ L E+ L V
Sbjct: 572 VPEMNIKLQRPVPSLVEGE---GLEHFLENYGCLPTEQERANRAQAVRAL-EVALKDVDL 627
Query: 123 VAWQRRLPKEQIAETHA--TILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHN 180
A E A + ++ GSYGLGV S SDID LC+GP F++ + FF +
Sbjct: 628 SA------SEDDARSGPPFVVVPVGSYGLGVWTSSSDIDCLCIGP-FSS--KTFFALAVQ 678
Query: 181 MLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACL--------HVLSVPENVDVLN- 231
LK ++ I VK ++ + GI +DL Y V+ P N
Sbjct: 679 RLKRAADIRIIRRVKANSGYMLELEVHGIKVDLQYCAAASIAERWPEVMKRPANDSAFAL 738
Query: 232 PFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGG 291
PF + L VR + + +PD+ +++ IK WA+ RG+Y GFLGG
Sbjct: 739 PF-------QTLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGG 791
Query: 292 VHLAILVAHVCQNHPKGSL----NTLVANFFKTYAYWPWPTPVMLQDPML 337
+H+++L+ +C+ GS +V FF+ Y+ + W T M+ DP
Sbjct: 792 IHISVLLVPICKALASGSEIVSPTDIVVTFFRHYSNFDWKTS-MVFDPFF 840
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 164/382 (42%), Gaps = 49/382 (12%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVK--RVAWQRRLPKEQIAETHATILTYGSYGLGVH 152
+ P+ E+ + ++ + L++I+L + V+ Q +P I+ GSY LGV
Sbjct: 623 MFPTDEQTRQHQDAFETLRQILLGTLDDTEVSIQPEIP--------FVIVPVGSYALGVW 674
Query: 153 GSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE---VSEIHCVKDAKVPLMRFKFDGI 209
S+SDID LC+G T++ F L R + V + V+ + ++ +G+
Sbjct: 675 TSDSDIDCLCIG----TISSKTFFKLARQRIIRSDNRGVRVLRKVEASTGTMLELSVNGV 730
Query: 210 LIDLPYA-CLHVL---SVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
L+DL Y + V+ S N+ +P F +L S + L R I + +P F
Sbjct: 731 LMDLQYCPAIQVVERWSEFRNIPASDPMF--NLSLLSLRKLKPYRDLLYIQRTLPSPSSF 788
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSLNTLVANFFKTY 321
+ RCIKLWA +RG+Y GFLGGVH+ ++++ VC+ + S LVA+FF Y
Sbjct: 789 RLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASAADLVASFFHHY 848
Query: 322 AYWPWPTPVMLQDPMLPAA--GYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFL 379
+ W T M+ D Y TR M + +P+ T + EF
Sbjct: 849 GQFDW-TNDMVYDVFFHKKRPRYNRSTREPMVVLGFHTPNSNIAHTSTMPGLQILVKEF- 906
Query: 380 RGHNTTRDLMRPDFDWHFLFEPFP--------------YSKKYARFVRVYLS--ASNQDD 423
+ L P W F P + + Y FV+V +
Sbjct: 907 --KAADKRLCEPGMTWDAFFGPGSTLSPVSSPSLGAAGFLETYQNFVKVDIQFWGRTLTK 964
Query: 424 LGDWVGWVKSRFRSLILKLEEV 445
VGWV+SR SLI+++ +
Sbjct: 965 GKSLVGWVESRCISLIVEIHKA 986
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 17/193 (8%)
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
LWA+RR +Y N+ GF GGV A+LVA VCQ +P+ + + +V FF+ W WP PV+L+
Sbjct: 51 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 110
Query: 334 ------------DPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRG 381
+P + Y + LMPI P P N++ ST I E RG
Sbjct: 111 PIEDGPLQMKVWNPKI----YHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRG 166
Query: 382 HNTTRDLMRPDFDWHFLFEPFP-YSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+ + W LF ++K Y ++ + S+ ++ W G V+S+ R L+
Sbjct: 167 GDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVG 226
Query: 441 KLEEVQGLCDPNP 453
L+ + +P
Sbjct: 227 ALDRKATIAIAHP 239
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQD----PMLPAAGYP 343
FLGGV AILVA CQ +P + L+ FF + W WP PV+L+D P P
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 344 SE------TRS-----LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPD 392
E TRS LMPI P P + N+T+ST I E G T +++
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGK 169
Query: 393 FDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE--VQGLCD 450
+W LF+ + +Y F+ + A+N++D W G V+S+ R LI LE LC
Sbjct: 170 AEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSLCH 229
Query: 451 PNPTEYIDV 459
NP + +
Sbjct: 230 INPQHFTPI 238
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 171/410 (41%), Gaps = 55/410 (13%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + + + G +P+ ++E R+ I L ++L Q + +E ++ G
Sbjct: 601 LKKTLLSHGYLPTEDDESMRKQAISVLDSVLLG-----NDQTKSDQEARTPVGLVLVPVG 655
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFF-VVLHNMLKSRPE-VSEIHCVKDAKVPLMR 203
S+GLGV S SD+D LC+G ++ FF + L + K+ + + + V ++
Sbjct: 656 SFGLGVWMSSSDVDCLCIG---TISSKTFFRMALQRLRKASDQGIRVLRKVLANTGTMLE 712
Query: 204 FKFDGILIDLPYACL--------HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
+ GI DL Y V+++P N +P F L + L R +
Sbjct: 713 LQILGIKFDLHYCAATSVFEKFPSVMNLPSN----HPEF--SLPVQTLAKLKPARDMYYL 766
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK----GSLN 311
L+ +PDL KF+ IK WA RG+YG G LGG+H+ +L+ +C+ S
Sbjct: 767 LRSIPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVPICKQLATLSRVVSTT 826
Query: 312 TLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLP-C-----SPHEYCHSN 365
++A FF Y + W V+L DP + E R R P C +P
Sbjct: 827 GILATFFSHYTNFDWEKQVVL-DPF-----FHKELRYHRTSREPFCLLGWHAPALNTAMT 880
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYS----KKYARFVRVYLS---- 417
+ T I TE + T L +P W + P + + + R + Y+
Sbjct: 881 ASTPTVKSIATEISK---TNSLLSQPGVTWDAILGPVGAAVAGVQDFLRGFKSYVKVDAR 937
Query: 418 --ASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPN--PTEYIDVDVTE 463
S+ ++GW++SR ++++ + P P +ID VTE
Sbjct: 938 FWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLPRIWPGRFIDAPVTE 987
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 174/418 (41%), Gaps = 49/418 (11%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P L +DE +V + + ++P E+ R+ + L +I+ + + +
Sbjct: 592 PDTLSSLDE-----IVSSLEDSSMLPGEEDFKTRKTAVDTLSQILTEPIHDSSGRD---- 642
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVS 189
+T ++ GSYGLG G SD+D LC+G A + FF + L+ S +
Sbjct: 643 ---IKTPLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIR 696
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVL---NPFFLRDLDETSWKS 245
+ VK A ++ + I +DL Y +V + + + +P F DL S
Sbjct: 697 IVRKVKAATGIMLELQSGHIKLDLQYCPAANVAERWQEISRIPFNDPIF--DLPPHSLSE 754
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ-N 304
L R + I ++VPD+ F+ RCI WAK GVY + G LGG+H+ ++++ + Q
Sbjct: 755 LQPYRDQEYIKRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLI 814
Query: 305 HPKGSLNT---LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEY 361
H K T LVA FF YA++ W M+ P + Y R M I P
Sbjct: 815 HEKCGRVTAPELVAMFFHHYAHFDWKNN-MVVSPGVQTR-YRRSLREPMVILTVHVPTIN 872
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLMRPD-FDWHFLFEPFPYSKKYARFVRVYLSASN 420
+T + I + F R +LM D W + S +L+A N
Sbjct: 873 VARAVTAPSLRTIVSAFKRAE----ELMGEDGARWSNILNDISISHNNQTGAEKFLAAYN 928
Query: 421 Q-------------DDLGDWVGWVKSRFRSLILKLE-EVQGLCDPN-PTEYIDVDVTE 463
+GW++SRF L+ L+ +V G+ P+ + +D T+
Sbjct: 929 SYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLDRQVLGIHGRIWPSRFTSIDATD 986
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 35/268 (13%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHA---TIL 142
L + N G +P+ +E + R ++ L E+ L V LP + ++
Sbjct: 592 LENFLENYGCLPTEQERENRAQAVRAL-EVALKDVD-------LPASEDDTRSGPPFVVV 643
Query: 143 TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLM 202
GSYGLGV S SDID LC+GP F++ + FF + LK ++ I VK ++
Sbjct: 644 PVGSYGLGVWTSSSDIDCLCIGP-FSS--KTFFALAVQRLKRAADIRIIRRVKANSGYML 700
Query: 203 RFKFDGILIDLPYACL--------HVLSVPENVDVLN-PFFLRDLDETSWKSLSGVRANK 253
+ GI +DL Y V+ P N PF + L VR
Sbjct: 701 ELEVHGIKVDLQYCAAASIAERWPEVMKRPANDSAFALPF-------QTLAKLKPVRDLF 753
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT- 312
+ + +PD+ +++ IK WA+ RG+Y GFLGG+H+++L+ +C+ GS
Sbjct: 754 YLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSETVS 813
Query: 313 ---LVANFFKTYAYWPWPTPVMLQDPML 337
+V FF+ Y+ + W T M+ DP
Sbjct: 814 PTDIVVTFFRHYSNFDWKTS-MVFDPFF 840
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus
ND90Pr]
Length = 1226
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 162/389 (41%), Gaps = 62/389 (15%)
Query: 94 GLVPSTEEEDKRRNVIQKLKEIVLAWVKRV-AWQRRLPKEQIAETHATILTYGSYGLGVH 152
G++P+ E+ +R+ + L+ IV + Q +P I+ GSY LGV
Sbjct: 623 GMIPNDEQTTQRQEAFELLQRIVSDTSEDADTVQPGIP--------LVIVPVGSYALGVW 674
Query: 153 GSESDIDALCLGPEFATMAEDFFVVLHNML--KSRPEVSEIHCVKDAKVPLMRFKFDGIL 210
S SDID LC+G + ++ FF + L P+V + V+ ++ +GIL
Sbjct: 675 TSSSDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKVEATTGTMLELSVNGIL 731
Query: 211 IDLPY--ACLHVLSVPENVDV--LNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQ 266
+D+ Y A V E D+ +P F +L S + L R + + +P F+
Sbjct: 732 MDMQYCPAAQVVERWSEFADIPASDPIF--NLSMLSLRKLKPYRDLLYLQRTIPSRSLFR 789
Query: 267 PVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN--HPKGSLNT--LVANFFKTYA 322
R IKLW +RG+Y G+LGG+H+ ++++ VC++ H GS+N +V +FF+ YA
Sbjct: 790 QAYRLIKLWGVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHDVGSVNVADIVVSFFQHYA 849
Query: 323 YWPWPTPVMLQDPMLPAAG--YPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
+ W M+ D Y TR M I +P+ T + EF
Sbjct: 850 NFDWSND-MVYDAFFHKKKPRYNRSTREPMVILSFHAPNSNFAQKSTVPGLQMLIKEF-- 906
Query: 381 GHNTTRDLMRPDFDWHFLFEP--------------FPYSKKYARFVRVYLSASNQDDLGD 426
L P W F + Y+ FV++ D+
Sbjct: 907 -KAADMKLSEPGMTWQKFFSTSSDLALKPCLPSGVVEFLNAYSDFVKI--------DIQF 957
Query: 427 W----------VGWVKSRFRSLILKLEEV 445
W VGWV+SR S+++ + +
Sbjct: 958 WGRMLAKGKGLVGWVESRCISIVVDIHKA 986
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 167/396 (42%), Gaps = 47/396 (11%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P L +DE +V + + ++P E+ R+ V+ L +I+ + + +
Sbjct: 592 PDTLSSLDE-----IVSSLEDSSILPGEEDFKSRKTVVATLSQILTEPIHDSSGRD---- 642
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVS 189
+T ++ GSYGLG G SD+D LC+G A + FF + L+ S +
Sbjct: 643 ---IKTPLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRRASALGIR 696
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVL---NPFFLRDLDETSWKS 245
+ VK A ++ + I +DL Y ++ + V + +P F DL S
Sbjct: 697 IVRKVKAATGIMLELQSGHIKLDLQYCPAANIAERWQEVSRIPSHDPIF--DLSLHSLSK 754
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ-- 303
L R + I ++VPD+ F+ RCI WAK GVY + G LGG+H+ +++ + Q
Sbjct: 755 LQPYRDQEYIKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCRLHQLI 814
Query: 304 --NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEY 361
+ ++ LVA FF YA++ W M+ P + Y R M I +P
Sbjct: 815 HEKFGRVTVPELVAMFFHHYAHFDWKNN-MVVSPGVQTR-YRRSLREPMVILTVHAPTIN 872
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLMRPD-FDWHFLFEPFPYS-------KKYARFVR 413
+T + I + F R +LM D W + S +K+ +
Sbjct: 873 VARAVTTPSLRTIVSAFKRA----EELMGEDGAKWSNILNDISISHNNQTGAEKFLAAYK 928
Query: 414 VYLSASNQ------DDLGDWVGWVKSRFRSLILKLE 443
Y+ + Q +GW++SRF L+ L+
Sbjct: 929 SYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLD 964
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 71/395 (17%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIV----LAWVKRVAWQRRLPKEQIAETHATI 141
L ++ + G +P+ EE +R+ L+ +V + V + RL I +
Sbjct: 611 LKGMLESMGAIPAAEENPRRQAAFDALRHVVTGNLVEGVSDASEYDRLRSSII------M 664
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK-----SRPEVSEIHCVKD 196
+ GS+GLGV SDID LC+GP ++ FF + +K S E+ + V+
Sbjct: 665 VPVGSWGLGVSTLSSDIDCLCIGPLSSST---FFALTTQRIKKASVESGLEIKLLRRVRA 721
Query: 197 AKVPLMRFKFDGILIDLPYACL--------HVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
++ + + +DL Y VL +P N +P F L + L
Sbjct: 722 NSGVMLELEVMSVRVDLQYCAATAVAEQWPAVLKLPPN----DPIFA--LPAQTLGKLKA 775
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
+R + + +PDL KF+ R IK WA+ RG+Y G+LGG+ ++IL+A VC+ +
Sbjct: 776 LRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARD 835
Query: 309 -----SLNTLVANFFKTYAYWPWPTPVML--------------QDPMLPAAGYPSETRSL 349
S+ ++++FF YA + W + ++P+ +P +
Sbjct: 836 YGQEVSVPDILSSFFSHYASFDWRNKIAFDPFFHKKLNYLRSAREPLAILGFFPPALNTT 895
Query: 350 MPIRLPCS---PHEYCHSN-------ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF 399
+ +P E +N +T TF+ + G + T L R D FL
Sbjct: 896 LAATVPSMKAIARELSQANELLNEDGMTWDTFFGASSA---GGDKTHSLARGAAD--FLS 950
Query: 400 EPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
+ K ++ + LS +Q ++GW++SR
Sbjct: 951 SYKSFVKIELQYWGISLSKGSQ-----FIGWLESR 980
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 181/440 (41%), Gaps = 68/440 (15%)
Query: 23 DFYPQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEER 82
D + A F V+ + +++ PS + P N + ++
Sbjct: 583 DHWGVRATFKVLAESQIADTTADILIPSSLATPAN--------------------LSDKH 622
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVL-AWVKRVAWQRRLPKEQIAETHATI 141
L L + +VP+ E+ KR V+ L+ +++ RV E + +
Sbjct: 623 DLDLC--LREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVEENGHSDNE--PDIAMVL 678
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKV 199
+ GSYGLGV SD+D L +GP + + FF + L+ + + + VK A
Sbjct: 679 VPVGSYGLGVWSPSSDVDCLSIGPISSKI---FFAIAEQRLRRAADSGIRILRKVKAATG 735
Query: 200 PLMRFKFDGILIDLPYA-CLHVLSVPENVDVL---NPFFLRDLDETSWKSLSGVRANKCI 255
++ + +GI DL Y V+ + + + +P F DL + L R I
Sbjct: 736 TMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF--DLSYQALTKLQAFRDLDYI 793
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPKGSLNT 312
+ +PDL F+ R I WAK RGVY + G+LGG+H+ ++++ V + + +
Sbjct: 794 RRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTD 853
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAG-----YPSETRSLMPIRLPCSPHEYCHSNIT 367
++ FF+ YA + W + DP + Y +E ++ I +P N+
Sbjct: 854 MIYRFFQYYADFDWEHETVF-DPFFFESTPRYRRYANEPMVILTINVPL-------INVA 905
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFL-------FEPF-PYSKKYARFVRVY---- 415
R+T RT + + PD W L EP + Y+ +++++
Sbjct: 906 RATAGSARTIVEELRRMAQLMSDPDMTWSKLLNSTVSTLEPSEEFLTAYSSYIKIHVQYW 965
Query: 416 -LSASNQDDLGDWVGWVKSR 434
+S + L +GW++SR
Sbjct: 966 GISLAKGKML---LGWLESR 982
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 164/391 (41%), Gaps = 67/391 (17%)
Query: 82 RSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH--- 138
+S L ++ + G+ PS EE +R++ ++ LK +V + + T
Sbjct: 607 QSAELDSVLASGGMFPSEEEVQQRKDALEILKRVVYG----------TSSDDVTSTSDVP 656
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF-VVLHNMLKSRPEVSEIHCVKDA 197
I+ GSY LGV S SDID LC+G ++ FF + ++K+ + + +A
Sbjct: 657 MIIVPVGSYALGVWTSGSDIDCLCIG---TISSKTFFKLARQRLVKAHDQGVRVLRKVEA 713
Query: 198 KVPLMR---FKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKC 254
M +F G+ P L +LS+ + L P+ RDL
Sbjct: 714 NTGTMLELWSEFAGLPASDPIFNLSILSLRK----LKPY--RDL--------------LY 753
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILV--AHVCQNHPKGSLNT 312
I + +P L F+ RCIKLWA RRG+Y G+LGGVH+ +++ A C H GS+
Sbjct: 754 IQRTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWAAKCLAHDSGSITA 813
Query: 313 --LVANFFKTYAYWPWPTPVMLQDPMLPAAG--YPSETRSLMPIRLPCSPHEYCHSNITR 368
LV++FF +A++ W T M+ D Y R M + +P+ T
Sbjct: 814 PDLVSSFFHHFAHFNW-TNDMMYDAFFHKQKPRYHRSAREPMVVLGFHAPNSNIAHTSTL 872
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYA----RFVRVYLSASN---Q 421
+ + +E D P W F S + A +LSA + +
Sbjct: 873 PGLHTLVSEMKAADEALSD---PSMTWKKFFGSTDNSPQAALSPISGASDFLSAHSSYVK 929
Query: 422 DDLGDW----------VGWVKSRFRSLILKL 442
D+ W VGWV+SR SL++ +
Sbjct: 930 IDIQFWGRTLAKGKSLVGWVESRCLSLVVDI 960
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 168/406 (41%), Gaps = 56/406 (13%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P L +D+ +V + + ++P E+ R+ V+ L +I+ + + +
Sbjct: 589 PDTLSSLDK-----IVSSLEDSSMLPGEEDIVIRKTVVATLAQILTEPIHDASGKD---- 639
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVS 189
+T ++ GSYGLG G SD+D LC+G A + FF + L+ S +
Sbjct: 640 ---IKTPLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIR 693
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYA--------CLHVLSVPENVDVLNPFFLRDLDET 241
+ VK A ++ + I +DL Y V +P + +P F DL
Sbjct: 694 IVRKVKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIPSH----DPIF--DLSLH 747
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
S L R + + ++VPD+ F+ RCI WAK GVY + G LGG+H+ ++++ +
Sbjct: 748 SLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRL 807
Query: 302 CQ----NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCS 357
Q + ++ LVA FF YA++ W M+ P + Y R M I
Sbjct: 808 HQLIHERFGRVTVPELVAMFFHHYAHFDWKNN-MVVSPGVHTR-YRRSLREPMVILTAHV 865
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPD-FDWHFLFEPFPYSKKYARFVRVYL 416
P +T + I + F R +L+ D W + S+ +L
Sbjct: 866 PTVNVARAVTAPSLRTIVSAFKRA----EELIGEDGAKWSNILNDISISQNNQTGAEKFL 921
Query: 417 SASNQ-------------DDLGDWVGWVKSRFRSLILKL-EEVQGL 448
+A N +GW++SRF L+ L +VQG+
Sbjct: 922 AAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQGI 967
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 181/440 (41%), Gaps = 68/440 (15%)
Query: 23 DFYPQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEER 82
D + A F V+ + +++ PS + P N + ++
Sbjct: 583 DHWGVRATFKVLAESQIADTTADILIPSSLATPAN--------------------LSDKH 622
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVL-AWVKRVAWQRRLPKEQIAETHATI 141
L L + +VP+ E+ KR V+ L+ +++ RV E + +
Sbjct: 623 DLDLC--LREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVEENGHSDNE--PDIAMVL 678
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKV 199
+ GSYGLGV SD+D L +GP + + FF + L+ + + + VK A
Sbjct: 679 VPVGSYGLGVWSPSSDVDCLSIGPISSKI---FFAIAEQRLRRAADSGIRILRKVKAATG 735
Query: 200 PLMRFKFDGILIDLPYA-CLHVLSVPENVDVL---NPFFLRDLDETSWKSLSGVRANKCI 255
++ + +GI DL Y V+ + + + +P F DL + L R I
Sbjct: 736 TMIELEVNGIKCDLHYCPAARVVEGWQRISLSPPDDPIF--DLSYQALTKLQAFRDLDYI 793
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPKGSLNT 312
+ +PDL F+ R I WAK RGVY + G+LGG+H+ ++++ V + + +
Sbjct: 794 RRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTD 853
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAG-----YPSETRSLMPIRLPCSPHEYCHSNIT 367
++ FF+ YA + W + DP + Y +E ++ I +P N+
Sbjct: 854 MIYRFFQYYADFDWEHETVF-DPFFFESTPRYRRYANEPMVILTINVPL-------INVA 905
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFL-------FEPF-PYSKKYARFVRVY---- 415
R+T RT + + PD W L EP + Y+ +++++
Sbjct: 906 RATAGSARTIVEELRRMAQLMSDPDMTWSKLLNSTVSTLEPSEEFLTAYSSYIKIHVQYW 965
Query: 416 -LSASNQDDLGDWVGWVKSR 434
+S + L +GW++SR
Sbjct: 966 GISLAKGKML---LGWLESR 982
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 168/406 (41%), Gaps = 56/406 (13%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P L +D+ +V + + ++P E+ R+ V+ L +I+ + + +
Sbjct: 589 PDTLSSLDK-----MVSSLEDSSMLPGEEDIVIRKTVVATLAQILTEPIHDASGKD---- 639
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVS 189
+T ++ GSYGLG G SD+D LC+G A + FF + L+ S +
Sbjct: 640 ---IKTPLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIR 693
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYA--------CLHVLSVPENVDVLNPFFLRDLDET 241
+ VK A ++ + I +DL Y V +P + +P F DL
Sbjct: 694 IVRKVKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIPSH----DPIF--DLSLH 747
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
S L R + + ++VPD+ F+ RCI WAK GVY + G LGG+H+ ++++ +
Sbjct: 748 SLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRL 807
Query: 302 CQ----NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCS 357
Q + ++ LVA FF YA++ W M+ P + Y R M I
Sbjct: 808 HQLIHERFGRVTVPELVAMFFHHYAHFDWKNN-MVVSPGVHTR-YRRSLREPMVILTAHV 865
Query: 358 PHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPD-FDWHFLFEPFPYSKKYARFVRVYL 416
P +T + I + F R +L+ D W + S+ +L
Sbjct: 866 PTVNVARAVTAPSLRTIVSAFKRA----EELIGEDGAKWSNILNDISISQNNQTGAEKFL 921
Query: 417 SASNQ-------------DDLGDWVGWVKSRFRSLILKL-EEVQGL 448
+A N +GW++SRF L+ L +VQG+
Sbjct: 922 AAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQGI 967
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 163/393 (41%), Gaps = 49/393 (12%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY- 144
L++L+ + P+ E R + L A LP A +++ T+
Sbjct: 571 LIELLKSNSCFPTPAETALRHQAVASL----------TACLNGLPDLTTAPENSSDTTFT 620
Query: 145 ------GSYGLGVHGSESDIDALCLG----PEFATMAEDFFVVLHNMLKSRPEV--SEIH 192
GS+GLG + S SD D L +G P F +A+ + S+
Sbjct: 621 LRLVPVGSFGLGTYTSTSDTDILAIGSISTPLFWRIAKQRIKRFRGKAADSSSLTSSDAL 680
Query: 193 CVK-----DAKVPLMRFKF-DGILIDLPYACLHVLSVPENVDVLNPFF-----LRDLDET 241
VK DA +P++ D I IDL Y +SV N D + PF L +L
Sbjct: 681 SVKIVRYVDATIPMLILLIGDKIRIDLQYTT--AVSVLSNFDTI-PFQPLNSPLWNLTVP 737
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
+ K L R +L +P+L K++ R IKLWA+++GVY + GF GGVH+++L+A V
Sbjct: 738 TLKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGGVHISLLLARV 797
Query: 302 CQNH-PKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHE 360
P + + L+A FF Y+ W V+ Y TR M I +P
Sbjct: 798 AMLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRYQRATRDKMVILTINTPVI 857
Query: 361 YCHSNITRSTFYKIRTEFLRG------HNTTRDLMRP---DFDWHFLFEPFPYSKKYARF 411
+N T T + + +E + T D++ D + Y R+
Sbjct: 858 NVAANATIHTVHTLSSELEKAAAKFELDATFSDVVGSFGDDTSKEIPIGVNEFLGGYNRY 917
Query: 412 VRVYLS--ASNQDDLGDWVGWVKSRFRSLILKL 442
++V + N+ VGWV+SR L+++L
Sbjct: 918 IKVDVQFWGLNRQGGRALVGWVESRLVGLLVEL 950
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 180/440 (40%), Gaps = 68/440 (15%)
Query: 23 DFYPQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEER 82
D + A F V+ + ++ PS + P N + ++
Sbjct: 583 DHWGVRATFKVLAESQIADTTADISIPSSLATPAN--------------------LSDKH 622
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVL-AWVKRVAWQRRLPKEQIAETHATI 141
L L + +VP+ E+ KR V+ L+ +++ RV E + +
Sbjct: 623 DLDLC--LREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVDENGHSNNE--PDIAMVL 678
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKV 199
+ GSYGLGV SD+D L +GP + + FF + L+ + + + VK A
Sbjct: 679 VPVGSYGLGVWSPSSDVDCLSIGPISSKI---FFAIAEQRLRRAADSGIRILRKVKAATG 735
Query: 200 PLMRFKFDGILIDLPYA-CLHVLSVPENVDVL---NPFFLRDLDETSWKSLSGVRANKCI 255
++ + +GI DL Y V+ + + + +P F DL + L R I
Sbjct: 736 TMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF--DLSYQALTKLQAFRDLDYI 793
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPKGSLNT 312
+ +PDL F+ R I WAK RGVY + G+LGG+H+ ++++ V + + +
Sbjct: 794 RRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTD 853
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAG-----YPSETRSLMPIRLPCSPHEYCHSNIT 367
++ FF+ YA + W + DP + Y +E ++ I +P N+
Sbjct: 854 MIYRFFQYYADFDWEHKTVF-DPFFFESTPRYRRYANEPMVILTINVPL-------INVA 905
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFL-------FEPF-PYSKKYARFVRVY---- 415
R+T RT + + PD W L EP + Y+ +++++
Sbjct: 906 RATAGSARTIVEELRRMAQLMSDPDMTWSKLLNSTVSTLEPSEEFLTAYSSYIKIHVQYW 965
Query: 416 -LSASNQDDLGDWVGWVKSR 434
+S + L +GW++SR
Sbjct: 966 GISLAKGKTL---LGWLESR 982
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 25/256 (9%)
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRV--AWQRRLPKEQIAETHAT 140
S S+ + G+ P+ E+ + ++ + ++I+L + + Q +P
Sbjct: 532 SSSITSALAAHGMFPTDEQTRQHQDAFETFRQILLGTLDATEDSIQPEIP--------FV 583
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF-VVLHNMLKSRPE-VSEIHCVKDAK 198
++ GSY LGV S+SDID LC+G ++ FF + ++KS V + V+ +
Sbjct: 584 MVPVGSYALGVWTSDSDIDCLCIG---TISSKTFFKLARQRIIKSDNRGVRILRKVEAST 640
Query: 199 VPLMRFKFDGILIDLPYA----CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKC 254
++ +G+L+DL Y + S N+ +P F +L S + L R
Sbjct: 641 GTMLELSVNGVLMDLQYCPATQVVERWSEFRNIPASDPIF--NLSLLSLRKLKPYRDLLY 698
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSL 310
I + +P L F+ RCIKLWA +RG+Y GFLGGVH+ ++++ +C+ + S
Sbjct: 699 IQRTLPSLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASA 758
Query: 311 NTLVANFFKTYAYWPW 326
LV +FF Y + W
Sbjct: 759 ADLVTSFFHHYGQFDW 774
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 156/381 (40%), Gaps = 39/381 (10%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
S+ + + ++PS E KR+ + LK +VL A R ++ ++
Sbjct: 635 SVKEALAALQVIPSEGEATKRKRALDLLKSVVLDTPSADAAGAR------SQPTVVVVPV 688
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKV---PL 201
GSY LGV S SDID LC+GP + + F L + + I ++ + +
Sbjct: 689 GSYALGVWTSSSDIDVLCIGP----FSSNTFFALASQRVRKAAAQGIKLLRRVRAHTGTM 744
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVL-----NPFFLRDLDETSWKSLSGVRANKCIL 256
+ + G+ +DL Y C DVL +P + L + L +R +
Sbjct: 745 LELEVHGVKVDLQY-CPAASVAERWPDVLRIPSSDPVW--SLSAQTLSKLKAIRDADYLR 801
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ--NHPKGSLNT-- 312
+ VPDL F+ R +K WAK RG+Y GFL G+ +++L+A V + G+ T
Sbjct: 802 RSVPDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGAPPTPE 861
Query: 313 -LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRL----PCSPHEYCHSNIT 367
L+ FF YA + W + DP+ P + P+ + P + + +++
Sbjct: 862 ALIVTFFHHYAAFDWSAQLAF-DPLFHRRRLPYSRTAREPLAILGYFPPALNTALAASVP 920
Query: 368 RSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQ------ 421
+ + EF R + R P W L ++ + Y+ Q
Sbjct: 921 STK--TLAAEFRRASDALRSATDPPASWSSLLSVSAGRDEFLAAYKSYVKLDVQYWGLSL 978
Query: 422 DDLGDWVGWVKSRFRSLILKL 442
++GW++SR L++ L
Sbjct: 979 SRGAQFLGWLESRCVMLLVDL 999
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAGYP--------SETRSLMPIRLPCSPHEYCHS 364
LV+ FF+ + W WP PVML G+P + MPI P P
Sbjct: 2 LVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSY 61
Query: 365 NITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDL 424
N++ ST + +F G+ +++ W LFEPF + + Y +++V + A + +DL
Sbjct: 62 NVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDEDL 121
Query: 425 GDWVGWVKSRFRSLILKLE-EVQGL--CDPNPTEYIDVDVTEPHIVFYWGL 472
W GWV+SR R L LK+E + G+ C P P EY D H F+ GL
Sbjct: 122 RLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGL 172
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 24/266 (9%)
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATIL 142
+ +L Q M N + P+ ++E R+ +Q L++I+L + A Q R ++
Sbjct: 584 TAALRQCMENLEVFPTEQDETTRKEALQLLRQILLDSDQANADQTR------GRPTVMLV 637
Query: 143 TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKVP 200
GSYGLG SDID LC+G + FF + L+ E V + VK
Sbjct: 638 PVGSYGLGTWSRTSDIDCLCIG---SISPRIFFTLARQRLRKSGESGVRLLRKVKAKTGT 694
Query: 201 LMRFKFDGILIDLPYACLHVLSVPENVDVL-----NPFFLRDLDETSWKSLSGVRANKCI 255
++ + GI DL Y C V + D+L +P F L + L R +
Sbjct: 695 MLEVEVMGIKCDLQY-CQAPSVVDQWPDMLKRPPSDPAF--SLPMQTLLKLKPARDLFYL 751
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK----GSLN 311
+ +PDL +F+ + IK WAK RG+Y G+LGG+HL++++ VC+ + S
Sbjct: 752 QRSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVKVCKMLLRVGGVVSAV 811
Query: 312 TLVANFFKTYAYWPWPTPVMLQDPML 337
++ FF Y+ + W V+ DP
Sbjct: 812 DIITTFFDHYSRFDWQNDVVF-DPFF 836
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATIL--TYGSY 147
+ ++ +VPS+E+ +KR+ LK ++ + + ++I + +I+ T GSY
Sbjct: 632 LADKSIVPSSEDAEKRKAAFSLLKNLI----QHGSLPESGKGKEIDQPRLSIVVTTVGSY 687
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKVPLMRFK 205
GLGV SD+D LC+G + ++ FF + LK E V + VK A ++ +
Sbjct: 688 GLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLELE 744
Query: 206 FDGILIDLPY-----ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP 260
+ + DL Y L VP ++ +P F DL L R + + VP
Sbjct: 745 INSVKFDLQYCPAAAVAERWLEVP-HLPRSSPLF--DLALLPLMKLQPYRDQAYLQRTVP 801
Query: 261 DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSLNTLVAN 316
+ F+ + R IK WAK RG+Y + G+LGG+H+ ++++ V + P S ++
Sbjct: 802 NPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAADILCT 861
Query: 317 FFKTYAYWPWPTPVM 331
FF Y + W VM
Sbjct: 862 FFNYYGNFNWKEDVM 876
>gi|413933520|gb|AFW68071.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 546
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + + +EG+V S E+E+KR VI++LK+IV+ W VA+++ +P+ AT+LTY
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQ---GLATATVLTYD 268
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
SY LG HG ES+ID LCLGP AT+ FFVVL
Sbjct: 269 SYTLGAHGPESNIDLLCLGPCIATLQYHFFVVL 301
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 162/383 (42%), Gaps = 37/383 (9%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + M N + P+ + E R+ +Q L+ +L + Q R ++ G
Sbjct: 584 LRRCMENLNIFPTEQNEAVRKEALQLLQHTLLDSDQTTGDQTR------GRPAIMLVPVG 637
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVSEIHCVKDAKVPLMR 203
SYGLG SDID LC+G + FF++ L+ P V + VK ++
Sbjct: 638 SYGLGTWSRTSDIDCLCIG---SISPRVFFILARQRLRKSGNPGVRLLRKVKAKTGTMLE 694
Query: 204 FKFDGILIDLPYACLHVLSVPENVDVL-----NPFFLRDLDETSWKSLSGVRANKCILQL 258
+ G+ DL Y C V + D+L +P F L + L R + +
Sbjct: 695 VEILGVKCDLQY-CQAPSVVEQWPDMLKRPPSDPAF--SLPMQTLLKLKPARDLFYLQRS 751
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN--HPKGSLNT--LV 314
VPDL +F+ + IK WAK RG+Y G+LGG+HL++++ VC+ H G ++T ++
Sbjct: 752 VPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVKVCKMLLHDGGVVSTADII 811
Query: 315 ANFFKTYAYWPWPTPVMLQDPM----LPAAGYPSETRSLMPIRLPCSPHEYCHS----NI 366
FF Y+ W M+ DP L P E L+ P S I
Sbjct: 812 TTFFDHYSQLDWQRD-MVFDPFFHKNLKYHRTPREAMCLLGWHSPTLNTALTASVPTTKI 870
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMR-PDFDWHFLFEPFP--YSKKYARFV--RVYLSASNQ 421
+ + T+ R + + L+ PD P + + F+ RV+ ++
Sbjct: 871 ISAELCQATTQLSRDGTSWQSLLSIPDSSHSKNMTPGASNFLGSFRSFINLRVHYWGASL 930
Query: 422 DDLGDWVGWVKSRFRSLILKLEE 444
+ VGW++SR SL++ + +
Sbjct: 931 ERGSRLVGWLESRCASLLVDVNK 953
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 178/420 (42%), Gaps = 70/420 (16%)
Query: 67 NFPLNPSVLD------QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWV 120
N P+ + +D D+ SL + Q ++ +VPS E + R+ LK I+
Sbjct: 566 NIPVKSTPIDIEKAHPNFDDPVSLKICQ--EDQSIVPSPESAEARKAAFLLLKHII---- 619
Query: 121 KRVAWQRRLPKEQIAETHATIL--TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
+ + E+I + +I+ T GS GLGV SDID LC+G + A FF ++
Sbjct: 620 QDGSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVG---SISANVFFELI 676
Query: 179 HNMLKSRPE--VSEIHCVKDAKVPLMRFKFDGILIDLPY-----ACLHVLSVPENVDVLN 231
L++R + V I VK A ++ + +GI DL Y L VP N+ +
Sbjct: 677 IQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDLQYCPAAAVAKRWLEVP-NLPQSS 735
Query: 232 PFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGG 291
P F +L L R + + + + F+ + R IK WAK RG+Y + G+LGG
Sbjct: 736 PLF--NLSLIPRMKLQPYRDQAYLQRTIRNPATFRLLHRIIKGWAKYRGIYSSRFGYLGG 793
Query: 292 VHLAILVAHVCQNHP--KGSLNTLVANFFKTYAYWPWPTPVMLQDPML---PAAGY--PS 344
+H+ ++++ + + P GS ++ FF Y + W + DP+ P Y P
Sbjct: 794 IHITLMLSRLMKLLPPNPGSAADILCTFFNHYGNFNWEKDAVY-DPIFHEKPPRNYRPPR 852
Query: 345 ETRSLMPIRLPCSPHEYCHSNITRST----FYKIRTEFLRGHNTTRDLMRPDFDWHFLFE 400
E + + P N+ RST KI E R N + + +W L
Sbjct: 853 EGMIIFTLHTPI-------INVARSTSIPSMRKIVDEMKRAENL---ISEGNANWAELLG 902
Query: 401 PFP-------------YSKKYARFVRV-----YLSASNQDDLGDWVGWVKSRFRSLILKL 442
+P + K Y ++++ LS + L VGWV+SR L+ L
Sbjct: 903 VYPKPGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSL---VGWVESRCLDLLNDL 959
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P L DE +S + ++P E R++V+ L +I+ +
Sbjct: 592 PKSLSTSDEIKSC-----LGASSMLPDEEGIKTRKSVVATLAQILTEPIHD-------SN 639
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVS 189
+ ET ++ GSYGLG G SDID LC+GP FF + LK S +
Sbjct: 640 GRDIETPLVLIPVGSYGLGTWGPNSDIDCLCIGP---ISTSTFFSLAIQRLKKASAHGIR 696
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSV----PENVDVLNPFFLRDLDETSWKS 245
+ VK A ++ + I +DL Y ++ + +P F DL S
Sbjct: 697 IMRKVKAATGMMLELQAGNIKLDLQYCPAANIAKRWQEATKIPPHDPIF--DLSIYSLSK 754
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ-- 303
L R + I ++VPD+ FQ RCI LWAK GVY + G LGG+H+ ++++ + Q
Sbjct: 755 LQPFRDQEYIKRMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIHITMMLSRLHQLL 814
Query: 304 --NHPKGSLNTLVANFFKTYAYWPWPTPVM 331
+ + ++ L+ FF YA + W V+
Sbjct: 815 HEDIGRVTVPELLTMFFHHYANFDWKNKVV 844
>gi|413933521|gb|AFW68072.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 763
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
L + + +EG+V S E+E+KR VI++LK+IV+ W VA+++ +P+ AT+LTY
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQ---GLATATVLTYD 268
Query: 146 SYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
SY LG HG ES+ID LCLGP AT+ FFVVL
Sbjct: 269 SYTLGAHGPESNIDLLCLGPCIATLQYHFFVVL 301
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 295 AILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG---YPSET 346
A+LVA CQ +P +TLV FF ++ W WP PV+L+ P LP PS+
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 347 RSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSK 406
LMPI P P + N++ ST + EF +G T +++ +W LFE + +
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQ 120
Query: 407 KYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
KY ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 121 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 172
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 1266
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATIL--TYGSY 147
+ ++ +VPS+E+ +KR+ LK ++ + + ++I + +I+ T GSY
Sbjct: 632 LADKSIVPSSEDAEKRKAAFSLLKNLI----QHGSLPESGKGKEIDQPRLSIVVTTVGSY 687
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKVPLMRFK 205
GLGV SD+D LC+G + ++ FF + LK E V + VK A ++ +
Sbjct: 688 GLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLELE 744
Query: 206 FDGILIDLPY-----ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP 260
+ + DL Y L VP ++ +P F DL L R + + VP
Sbjct: 745 INSVKFDLQYCPAAAVAERWLEVP-HLPRSSPLF--DLALLPLMKLQPYRDQAYLQRTVP 801
Query: 261 DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSLNTLVAN 316
+ F+ + R IK WAK RG+Y + G+LGG+H+ ++++ V + P S ++
Sbjct: 802 NPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAADILCT 861
Query: 317 FFKTYAYWPWPTPVM 331
FF Y + W VM
Sbjct: 862 FFNYYGNFNWKEDVM 876
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 162/389 (41%), Gaps = 52/389 (13%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK-EQIAETHATILT 143
+L Q + +VP+ ++E R+ + L+ I+ W+ EQ A +L
Sbjct: 584 ALKQTLELLDVVPAEKDERTRKQALGLLRMIL--------WENEQTNVEQSRGQPALVLV 635
Query: 144 -YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL--HNMLKSRPE-VSEIHCVKDAKV 199
GSYGLGV SDID LC+G +++ F L H + KS E V + VK
Sbjct: 636 PVGSYGLGVWSKSSDIDCLCIG----SISPRVFFTLARHRLRKSVGEGVRILRQVKAKTG 691
Query: 200 PLMRFKFDGILIDLPYACLHVLSVPENVDVLN--PFFLR--------DLDETSWKSLSGV 249
++ + G+ DL Y + V N P L+ L + L
Sbjct: 692 TMLEIEVLGLRCDLQYC--------QAASVANQWPNLLKRPPSDAAFSLPTQTLLKLKPA 743
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN--HPK 307
R I + VPDL +F+ + IK WAK G+Y G+LGGVHL++++ VC+ H
Sbjct: 744 RDMYYIARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLGGVHLSVMLVRVCKMLLHGM 803
Query: 308 GSLNT--LVANFFKTYAYWPWPTPVMLQDPM----LPAAGYPSETRSLMPIRLPCSPHEY 361
G+++T ++A FF YA++ W ++ DP L P E L+ P
Sbjct: 804 GTVSTADVIATFFDHYAHFDWKNDIVF-DPFFHKQLRYHRTPREAMCLLGWHSPTLNTAL 862
Query: 362 CHS----NITRSTFYKIRTEFLRGHNTTRDLMRPDF----DWHFLFEPFPYSKKYARFVR 413
S I + + +F G L P D F S K +R
Sbjct: 863 IASVPTVKIISTELRQANAKFTEGATWQSILSAPGMIAEKDLSQGAASFLSSFKTFVNLR 922
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKL 442
++ + + VGW++SR SL++ +
Sbjct: 923 IHYWGGSLERGSRLVGWLESRCASLLVDI 951
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 177/420 (42%), Gaps = 70/420 (16%)
Query: 67 NFPLNPSVLD------QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWV 120
N P+ + LD D+ SL + Q ++ +VPS E + R+ LK I+
Sbjct: 607 NTPVKATPLDIKKAHPNFDDPVSLKICQ--EDQSIVPSPESAEARKAAFLLLKHII---- 660
Query: 121 KRVAWQRRLPKEQIAETHATIL--TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
+ + E+I + +I+ T GS GLGV SDID LC+ + A FF ++
Sbjct: 661 QDSSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVS---SISANVFFELI 717
Query: 179 HNMLKSRPE--VSEIHCVKDAKVPLMRFKFDGILIDLPY-----ACLHVLSVPENVDVLN 231
L++R + V I VK A ++ + +GI DL Y L VP N+ +
Sbjct: 718 IQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDLQYCPAAAVAERWLEVP-NLPQSS 776
Query: 232 PFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGG 291
P F +L L R + + + + F+ + R IK WAK RG+Y + G+LGG
Sbjct: 777 PLF--NLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGG 834
Query: 292 VHLAILVAHVCQNHP--KGSLNTLVANFFKTYAYWPWPTPVMLQDPML---PAAGY--PS 344
+H+ ++++ + + P GS ++ FF Y + W + DP+ P Y P
Sbjct: 835 IHITLMLSRLMKLLPPNPGSAADILCTFFNHYGNFNWGKDAVY-DPIFHGKPPRNYRPPR 893
Query: 345 ETRSLMPIRLPCSPHEYCHSNITRST----FYKIRTEFLRGHNTTRDLMRPDFDWHFLFE 400
E + + P N+ RST KI E R N + + +W L
Sbjct: 894 EGMIIFTLHTPI-------INVARSTSIPSMRKIVDEMKRAENL---ISEGNANWAELLG 943
Query: 401 PFPYSKKYA------RFVRVY------------LSASNQDDLGDWVGWVKSRFRSLILKL 442
+P + K A F++ Y LS + L VGWV+SR L+ L
Sbjct: 944 IYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSL---VGWVESRCLDLLDDL 1000
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 26/257 (10%)
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVP 200
++ GSY GV SDID L +G +++ F+ L RPE EIH ++ K
Sbjct: 644 VVPVGSYASGVWDPSSDIDCLVIG----SISPKTFMALMVQKLRRPEWQEIHILRKVKAT 699
Query: 201 ---LMRFKFDGILIDLPYACL--------HVLSVPENVDVLNPFFLRDLDETSWKSLSGV 249
++ + G+ DL Y L++P + +P F DL S L+
Sbjct: 700 SGTMLEIQAGGVRFDLQYCAATSVTDSWPKALTLPSS----DPTF--DLPMQSLLKLNSH 753
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NH 305
R + + + +PDL F+ R IK WAK RG+Y + G+LGG+H+ +L+A VC+
Sbjct: 754 RDLEYLQRTIPDLATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLARVCKLSFREA 813
Query: 306 PKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAA-GYPSETRSLMPIRLPCSPHEYCHS 364
S++ ++++FF Y + W ++ + Y +R M I P
Sbjct: 814 GATSVSDIISDFFFYYENFDWKNDMVYETTFYTGTPKYHRLSREPMVILSIHPPKVNVAH 873
Query: 365 NITRSTFYKIRTEFLRG 381
T S+ + + EF R
Sbjct: 874 ASTVSSVHTLEQEFKRA 890
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 163/388 (42%), Gaps = 57/388 (14%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGL 149
+ + G P++ + + R I LK +L A + Q+ ++ GS+GL
Sbjct: 614 LVSSGQFPASSDAELRNEAISLLKTTLLDSDAESAGNSTRSQVQL-----VVIPVGSFGL 668
Query: 150 GVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVSEIHCVKDAKVPLMRFKFD 207
GV S SD+D LC+G + FF + L+ S + + VK ++ +
Sbjct: 669 GVWTSSSDVDCLCVG---NISSRTFFALAIQKLRKASANGIKILRRVKANSGTMLELEIR 725
Query: 208 GILIDLPYACLHVLS--VPE--NVDVLNPFFLRDLDETSWKSLSGVRANKCILQL---VP 260
GI DL Y ++ PE +P F L +SL+ ++ + + L +P
Sbjct: 726 GIKFDLQYCSAAAIAQGYPEVFKRPSSDPIFALPL-----QSLAKLKPARDLFYLRRSIP 780
Query: 261 DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPK-GSLNTLVAN 316
D+ K++ IK WAK RG+Y G LGG+H+ ++ VC+ N P+ S ++ +
Sbjct: 781 DMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAASTADVLTS 840
Query: 317 FFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPC------SPHEYCHSNITRST 370
FF Y+ + W T V+ DP Y +E R R P P S+ + ST
Sbjct: 841 FFHHYSTFDWATGVVY-DPF-----YHTELRYHRTFREPLCLLGWHGPSLNTASSASIST 894
Query: 371 FYKIRTEFLRGHNTTRDLMRPDFDWHFLF----EPFPYS---KKYARFV---RVYLS--- 417
+ +EF R L + W P S K A F+ R Y+
Sbjct: 895 VNALASEFTRAATL---LSQEGMTWSKFLGVEQSESPSSLLEKGAADFLDSYRTYIKISA 951
Query: 418 ---ASNQDDLGDWVGWVKSRFRSLILKL 442
S+Q ++GW++SR S+++ +
Sbjct: 952 RYWGSSQQKGRKYLGWLESRLISILVDI 979
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 39/314 (12%)
Query: 23 DFYPQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEER 82
D + A F V+ + ++ PS + P N + ++
Sbjct: 583 DHWGVRATFKVLAESQIADTTADISIPSSLATPAN--------------------LSDKH 622
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVL-AWVKRVAWQRRLPKEQIAETHATI 141
L L + +VP+ E+ KR V+ L+ +++ RV E + +
Sbjct: 623 DLDLC--LREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVDENGHSNNE--PDIAMVL 678
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKV 199
+ GSYGLGV SD+D L +GP + + FF + L+ + + + VK A
Sbjct: 679 VPVGSYGLGVWSPSSDVDCLSIGPISSKI---FFAIAEQRLRRAADSGIRILRKVKAATG 735
Query: 200 PLMRFKFDGILIDLPYA-CLHVLSVPENVDVL---NPFFLRDLDETSWKSLSGVRANKCI 255
++ + +GI DL Y V+ + + + +P F DL + L R I
Sbjct: 736 TMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF--DLSYQALTKLQAFRDLDYI 793
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPKGSLNT 312
+ +PDL F+ R I WAK RGVY + G+LGG+H+ ++++ V + + +
Sbjct: 794 RRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTD 853
Query: 313 LVANFFKTYAYWPW 326
++ FF+ YA + W
Sbjct: 854 MIYRFFQYYADFDW 867
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 170/419 (40%), Gaps = 51/419 (12%)
Query: 72 PSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPK 131
P L +DE +V + + ++P E+ R+ + L +I+ + + +
Sbjct: 592 PDPLSSLDE-----IVSSLEHSSMLPGEEDFKTRKTAVDTLSQILTEPIHDSSGRD---- 642
Query: 132 EQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVS 189
+T ++ GSYGLG G SD+D LC+G A + FF + L+ S +
Sbjct: 643 ---IKTPLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIR 696
Query: 190 EIHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLSVPENVDVL---NPFFLRDLDETSWKS 245
+ VK A ++ + I +DL Y +V + + + +P F DL S
Sbjct: 697 IVRKVKAATGVMLELQSGHIKLDLQYCPAANVAERWQEISRIPSHDPIF--DLSLHSLSK 754
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ-- 303
L R + I ++VPD+ F+ RCI AK GVY + G LGG+H+ ++++ + Q
Sbjct: 755 LQPYRDQEYIKRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQLHQLV 814
Query: 304 --NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEY 361
+ ++ LV+ FF YA++ W M+ P + Y R M I P
Sbjct: 815 HEKFGRVTVPELVSMFFHYYAHFDWKNN-MVVSPGVQTR-YRRSLREPMVILTVHVPTIN 872
Query: 362 CHSNITRSTFYKIRTEFLRGHNTTRDLMRPD-FDWHFLFEPFPYSKKYARFVRVYLSASN 420
+T + I + F N +LM D W + S +L+A N
Sbjct: 873 VARAVTAPSLRTIVSAF----NRAEELMGEDGARWSNILNDISISHNNQTGAEKFLTAYN 928
Query: 421 Q-------------DDLGDWVGWVKSRFRSLILKLEEVQGLCDPN---PTEYIDVDVTE 463
+GW++SRF L+ L+ Q L P + +D T+
Sbjct: 929 SYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLDR-QALGIHGRIWPARFTSIDTTD 986
>gi|194696942|gb|ACF82555.1| unknown [Zea mays]
Length = 131
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 25/139 (17%)
Query: 422 DDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQPGRTNLLD 481
++L DWVGWVKSRFR+L+LKLE + CDP+P+E +D +T+P++VF+WGL R +
Sbjct: 3 EELRDWVGWVKSRFRNLLLKLESLGVYCDPDPSEQVDHTITDPNVVFFWGLIYRRNIQIC 62
Query: 482 IVAVEKDFLKNIHNGFQG----SPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDY 537
I ++++DF+K++ N G + + + +V QL KS
Sbjct: 63 ISSLKEDFMKSVCNNIYGKEKCAHSDITMSIVGPPQLPKS-------------------- 102
Query: 538 NLPRIPVYSQHLPNYIIGY 556
+ + VYS+ LP +++G+
Sbjct: 103 -VFDLSVYSEKLPQHMMGH 120
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 296 ILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA-----AGYPSE 345
+LVA CQ +P +TLV FF ++ W WP PV+L+ P LP + PS+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 346 TRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYS 405
LMPI P P + N++ ST + EF +G T +++ +W LFE +
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 120
Query: 406 KKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+KY ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 121 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 173
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 55/287 (19%)
Query: 211 IDLPYACLHVLSVPENVDVLNP--FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPV 268
+DL + L +P+ +D R++D S +SLSG+ + +++ F P+
Sbjct: 51 VDLVISRLATSYIPQQLDFEQTPGDLYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPL 110
Query: 269 LRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----------------------NHP 306
LR I+ W + R + ++GF + I+V ++C+ + P
Sbjct: 111 LRVIRTWVRARAIGSYVYGFPASIAWTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEP 170
Query: 307 KGSLNT--------------LVANFFKTYAYWPWPTPVMLQ-------------DPMLPA 339
N+ LV FF +A WPWP PV + DP A
Sbjct: 171 AAERNSGEESLASRSHALFCLVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNA 230
Query: 340 AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF 399
+ R LMPI P P++ + ++T + E +R + D++R W LF
Sbjct: 231 ----QDGRDLMPILTPVFPNKNAAFTVRQATRKIVTDELIRARDIVSDVLRGSGTWEKLF 286
Query: 400 EPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQ 446
E + + F+ + L +++++L G + SR R L LE+ Q
Sbjct: 287 ERYDLRDDHRHFLLLTLQTTSKEELVVVGGLIDSRLRDLAQALEDEQ 333
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 178/420 (42%), Gaps = 70/420 (16%)
Query: 67 NFPLNPSVLD------QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWV 120
N P+ + LD D+ SL + Q ++ +VPS E + R+ LK I+
Sbjct: 607 NTPVKSTPLDIKKAHPNFDDPVSLKICQ--EDQSIVPSPESAEARKAAFLLLKHII---- 660
Query: 121 KRVAWQRRLPKEQIAETHATIL--TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
+ + E+I + +I+ T GS GLGV SDID LC+G + A FF ++
Sbjct: 661 QDGSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVG---SISANVFFELI 717
Query: 179 HNMLKSRPE--VSEIHCVKDAKVPLMRFKFDGILIDLPY-----ACLHVLSVPENVDVLN 231
L++R + V I VK A ++ + +GI DL Y L VP N+ +
Sbjct: 718 IQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDLQYCPAAAVAERWLEVP-NLPQSS 776
Query: 232 PFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGG 291
P F +L L R + + + + F+ + R IK WAK RG+Y + G+LGG
Sbjct: 777 PLF--NLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGG 834
Query: 292 VHLAILVAHVCQNHP--KGSLNTLVANFFKTYAYWPWPTPVMLQDPML---PAAGY--PS 344
+H+ ++++ + + P GS ++ FF Y + W + DP+ P Y P
Sbjct: 835 IHITLMLSRLLKLLPPNPGSAADILCTFFNHYGNFNWEKDAVY-DPIFHEKPPRNYRPPR 893
Query: 345 ETRSLMPIRLPCSPHEYCHSNITRST----FYKIRTEFLRGHNTTRDLMRPDFDWHFLFE 400
E + + P N+ RST KI E R N + + +W L
Sbjct: 894 EGMIIFTLHTPI-------INVARSTSIPSMRKIVDEMKRAENL---ISEGNANWAELLG 943
Query: 401 PFPYSKKYA------RFVRVY------------LSASNQDDLGDWVGWVKSRFRSLILKL 442
+P + K A F++ Y LS + L VGWV+SR L+ L
Sbjct: 944 IYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSL---VGWVESRCLDLLDDL 1000
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 178/420 (42%), Gaps = 70/420 (16%)
Query: 67 NFPLNPSVLD------QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWV 120
N P+ + LD D+ SL + Q ++ +VPS E + R+ LK I+
Sbjct: 607 NTPVKSTPLDIKKAHPNFDDPVSLKICQ--EDQSIVPSPESAEARKAAFLLLKHII---- 660
Query: 121 KRVAWQRRLPKEQIAETHATIL--TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
+ + E+I + +I+ T GS GLGV SDID LC+G + A FF ++
Sbjct: 661 QDGSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVG---SISANVFFELI 717
Query: 179 HNMLKSRPE--VSEIHCVKDAKVPLMRFKFDGILIDLPY-----ACLHVLSVPENVDVLN 231
L++R + V I VK A ++ + +GI DL Y L VP N+ +
Sbjct: 718 IQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDLQYCPAAAVAERWLEVP-NLPQSS 776
Query: 232 PFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGG 291
P F +L L R + + + + F+ + R IK WAK RG+Y + G+LGG
Sbjct: 777 PLF--NLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGG 834
Query: 292 VHLAILVAHVCQNHP--KGSLNTLVANFFKTYAYWPWPTPVMLQDPML---PAAGY--PS 344
+H+ ++++ + + P GS ++ FF Y + W + DP+ P Y P
Sbjct: 835 IHITLMLSRLLKLLPPNPGSAADILCTFFNHYGNFNWEKDAVY-DPIFHEKPPRNYRPPR 893
Query: 345 ETRSLMPIRLPCSPHEYCHSNITRST----FYKIRTEFLRGHNTTRDLMRPDFDWHFLFE 400
E + + P N+ RST KI E R N + + +W L
Sbjct: 894 EGMIIFTLHTPI-------INVARSTSIPSMRKIVDEMKRAENL---ISEGNANWAELLG 943
Query: 401 PFPYSKKYA------RFVRVY------------LSASNQDDLGDWVGWVKSRFRSLILKL 442
+P + K A F++ Y LS + L VGWV+SR L+ L
Sbjct: 944 IYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSL---VGWVESRCLDLLDDL 1000
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 48/337 (14%)
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVP 200
++ GSYGLGV S SDID LC+G +++ F L R I ++ K
Sbjct: 644 LVPVGSYGLGVWTSSSDIDCLCIG----SISPKIFFALAVQRLRRAVTGGIRILRRVKAN 699
Query: 201 ---LMRFKFDGILIDLPYACLHVLSV--PENVD--VLNPFFLRDLDETSWKSLSGVRANK 253
++ + GI +DL Y ++ PE + +P F L + L VR
Sbjct: 700 SGYMLELEVHGIKMDLQYCAAASIAERWPEVMKRPASDPAFA--LPFQTLAKLKPVRDLF 757
Query: 254 CILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGS 309
+ + +PD+ +++ IK WA+ RG+Y GFLGG+H+++L+A +C+ + S
Sbjct: 758 YLRRSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAPLCKMLANDGATVS 817
Query: 310 LNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPC------SPHEYCH 363
++ FF+ YA + W T ++ DP + + R R P +P
Sbjct: 818 TADIIFTFFQHYARFSWKTALVF-DPF-----FHKDLRYNRTFREPLCLLGWHAPALNTA 871
Query: 364 SNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYS--------------KKYA 409
N + T I EF R R L +F W L P S + Y
Sbjct: 872 VNASVPTVDAIAAEFERAE---RLLSVENFSWSNLLGVEPDSPPSSLSGPGATEFLQNYK 928
Query: 410 RFVRV--YLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
++++ + +Q+ G ++GW++SR L++ L+
Sbjct: 929 SYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDR 965
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 296 ILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETR 347
+LVA CQ +P +TLV FF ++ W WP PV+L+ P LP PS+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
LMPI P P + N++ ST + EF +G T +++ +W LFE + +K
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
Y ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 171
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 296 ILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETR 347
+LVA CQ +P +TLV FF ++ W WP PV+L+ P LP PS+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
LMPI P P + N++ ST + EF +G T +++ +W LFE + +K
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
Y ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 171
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1263
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 32/265 (12%)
Query: 83 SLSLVQLMTNE----GLVPSTEEEDKRRNVIQKLKEIVL-----AWVKRVAWQRRLPKEQ 133
+L VQL+ + G P+ +E +R+ + L++++L V A P+
Sbjct: 613 ALEDVQLLRDSLSALGAFPTEDEAARRQEAFELLRDLILENPTGTEVTDGASAAARPRPP 672
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
+ + + GSYGLGV SDID +C+GP + + F+ L +
Sbjct: 673 L-----VVTSVGSYGLGVWTPSSDIDVMCIGPYSSAV----FMALAVQRIRKAGARGFKL 723
Query: 194 VKDAKV---PLMRFKFDGILIDLPYACLHVLSV--PENVD--VLNPFFLRDLDETSWKSL 246
V+ + ++ + G+ +DL Y ++ P +D +P F L + L
Sbjct: 724 VRRVRANTGTMLELEVQGVKMDLQYCAATSVAEGWPAVLDRPASDPVF--SLPAQTLGKL 781
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN-- 304
R + + +PDL KF+ R ++ WA+ RG+Y G+LGG+ +++L+A VC++
Sbjct: 782 KAARDLDYLRRSLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARVCKSLA 841
Query: 305 ---HPKGSLNTLVANFFKTYAYWPW 326
P S+ ++ FF YA + W
Sbjct: 842 RDAGPGLSVADILVTFFHHYAAFDW 866
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 25/254 (9%)
Query: 94 GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
G VP+T E+ RR I L+ ++L Q + K+ ++ GSYGLGV
Sbjct: 616 GYVPTTSEQGTRRQAITILENVLLGID-----QAKPEKQGRGHVGLILVPVGSYGLGVWT 670
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVP---LMRFKFDGIL 210
S +D LC+G TM+ F + + + ++ A +++ + GI
Sbjct: 671 SSDHVDCLCIG----TMSSKTFFRMALQRLRKASDGGMRILRKASTSTGTMLKLQILGIK 726
Query: 211 IDLPYACLHVLSVPENVDVLN-----PFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
L Y C V + V+N P F L + L R +L+ +PDL KF
Sbjct: 727 FTLHY-CAATSIVEKYPRVMNLPSDHPEFA--LPVQTLAKLKPARDLYYLLRSIPDLAKF 783
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSL----NTLVANFFKTY 321
+ IK WA RG+YG G L G+H+ +L+ +C+ S+ ++ FF Y
Sbjct: 784 RVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPICKQLAAISMAVSTTDILTTFFSHY 843
Query: 322 AYWPWPTPVMLQDP 335
A W T V+L DP
Sbjct: 844 ADLEWETHVVL-DP 856
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATIL--TYGSY 147
+ ++ +VPS+E+ +KR+ LK ++ + + ++I + +I+ T GSY
Sbjct: 632 LADKSIVPSSEDAEKRKAAFSLLKNLI----QHGSLPESGKGKEIDQPRLSIVVTTVGSY 687
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKVPLMRFK 205
GLGV SD+D LC+G + ++ FF + LK E V + VK A ++ +
Sbjct: 688 GLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLELE 744
Query: 206 FDGILIDLPY-----ACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVP 260
+ + DL Y L VP ++ +P F DL L R + + VP
Sbjct: 745 INSVKFDLQYCPAAAVAERWLEVP-HLPRSSPLF--DLALLPLMKLQPYRDQAYLQRTVP 801
Query: 261 DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSLNTLVAN 316
+ F+ + R IK WAK RG+Y + G+LGG+H+ ++++ V + P S ++
Sbjct: 802 NPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAADILCT 861
Query: 317 FFKTYAYWPWPTPVM 331
FF Y + W VM
Sbjct: 862 FFNYYGNFNWKEGVM 876
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + ++D + L+ M G+ EE + R V+ KL +V W+ V+ +
Sbjct: 74 PISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKN 133
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
LP +A I T+GSY LGVH +DIDALC+ P + DFF LK + +
Sbjct: 134 LPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGI 192
Query: 189 SEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSV 223
+ V+DA VP+++F+FDGI ++ P H++ +
Sbjct: 193 RNLRAVEDAFVPVIKFEFDGIEVN-PSDRYHLMPI 226
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 177/413 (42%), Gaps = 57/413 (13%)
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATIL 142
S SL + G +P+ +E R I+ L+ ++ ++ + + ++
Sbjct: 595 SESLEDFLEGRGCLPNEQERTDRVEAIKTLEMVLKDATSSIS-----ENDSRSGPAFIVV 649
Query: 143 TYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKVP 200
GSYGLGV S SDID LC+GP F++ + FF + LK V + VK
Sbjct: 650 PVGSYGLGVWTSSSDIDCLCIGP-FSS--KTFFALAVQRLKRATTLGVRILRRVKANSGN 706
Query: 201 LMRFKFDGILIDLPYACLHVLSV--PENVD--VLNPFFLRDLDETSWKSLSGVRANKCIL 256
++ + +GI +DL Y ++ PE + +P F L + L VR +
Sbjct: 707 MLELEVNGIKVDLQYCAAASIAERWPEVMKRPASDPAFA--LSFQALAKLKPVRDLFYLR 764
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSLNT 312
+ +PD+ +++ IK WA+ RG+Y GFLGG+H+++L+ VC+ + +
Sbjct: 765 RSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCKAVAYENETVTPAD 824
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPC------SPHEYCHSNI 366
+V FF Y+ + W M+ DP + E R R P +P
Sbjct: 825 IVVTFFHYYSEFDWKNS-MVFDPF-----FHKELRYNRTFREPLCLIGWHAPALNTAPIA 878
Query: 367 TRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF--EP--------FPYSKKYARFVRVYL 416
+ T I +EF R R L D W L EP P + ++ + Y+
Sbjct: 879 SIPTVATISSEFGRA---KRMLSDDDCIWGKLLGIEPETALGSVQAPAATEFLHAFKTYI 935
Query: 417 S------ASNQDDLGDWVGWVKSRFRSLIL----KLEEVQGLCDPNPTEYIDV 459
+Q+ G ++GW++SR L++ KL+ + L P+ ++DV
Sbjct: 936 KIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHL--LARIWPSRFLDV 986
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 22/234 (9%)
Query: 238 LDETSWKSLSGVRANKCILQLV------PDLEK--FQPVLRCIKLWAKRRGVYGNLHGFL 289
+D+ KS++G R+N+ IL+ V P++ K F+ L+ IK+WA+ G+Y N GFL
Sbjct: 1 MDQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFL 60
Query: 290 GGVHLAILVAHVCQNHPKGSLNTLVANFFKTYA-YWPWPTPVMLQDPMLPAAG------Y 342
G+ LAI++A + Q P +N ++ FF+T+A W W D L +
Sbjct: 61 SGISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKK----MDVQLGSRSEEMKVQM 116
Query: 343 PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPF 402
S+ R M I P P + F I + + ++ ++ + + W + E
Sbjct: 117 QSQQRKCMHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQN--QKNIVWEKIVEKE 174
Query: 403 PYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGL-CDPNPTE 455
+ Y F+ + L + + ++G ++ K L+ ++++G+ DP E
Sbjct: 175 NFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIE 228
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 86.7 bits (213), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/111 (45%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 202 MRFKFDGILIDLPYA--CLHVLSVPENVDVLNPFFLRDLDE-TSWKSLSGVRANKCILQL 258
MRF+ G+ +DL YA CL + + LR LD+ + +SL+G+R IL+L
Sbjct: 1 MRFR--GVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRL 58
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
VP+ F+ +LRC+K WAK RGVY N+ GFLGG+ AILVA +CQ +P S
Sbjct: 59 VPETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTS 109
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 39/257 (15%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT--------I 141
+ + + PS E+ +KR+ + LK ++L LP+ ETH T +
Sbjct: 633 LADRSIFPSPEDAEKRKAAFKYLKHLIL--------HGSLPES--GETHETGRSNFSFIV 682
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAKV 199
GSYGLGV + SD+D LC+GP +T FF + L+ + V + VK A
Sbjct: 683 TAVGSYGLGVWTNSSDVDCLCVGPVSSTT---FFELAMQRLRKGADSGVKILRKVKAATG 739
Query: 200 PLMRFKFDGILIDLPYA--------CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRA 251
+ + +G+ DL Y L V +P +P F DL S L R
Sbjct: 740 TMWELEVNGVKFDLQYCPAGAVAERWLEVSHLPR----ADPLF--DLAYLSLVKLQPYRD 793
Query: 252 NKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP--KGS 309
+ + + + F+ + R IK WAK RG+Y + G+LGG+H+ ++++ + + P S
Sbjct: 794 QTYLQRTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTTS 853
Query: 310 LNTLVANFFKTYAYWPW 326
+ ++ FF YA + W
Sbjct: 854 VADILRTFFNHYADFYW 870
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 204 FKFDGILIDLPYA--CLHVLSVPENVDVLNPFFLRDLDE-TSWKSLSGVRANKCILQLVP 260
+F G+ +DL YA CL + + LR LD+ + +SL+G+R IL+LVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 261 DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
+ F+ +LRC+K WAK RGVY N+ GFLGG+ AILVA +CQ +P S
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTS 109
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 166/406 (40%), Gaps = 51/406 (12%)
Query: 90 MTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGL 149
+ + G P+ + + R+ I L+ +L A E+ + ++ GS+GL
Sbjct: 605 LVSNGQFPTASDAELRQEAIALLQRTLLENDTTAA-----EAEKRSHVQLVLIPVGSFGL 659
Query: 150 GVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKV---PLMRFKF 206
GV S SDID LC+G ++ FF + LK + S I ++ ++ +
Sbjct: 660 GVWTSLSDIDCLCVG---NISSKTFFSLAVQKLK-KASTSGIKILRRVMANTGTMLELEI 715
Query: 207 DGILIDLPYACLHVLSVPENVDVL-----NPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
GI DL Y C DVL +P F L S L R + + +PD
Sbjct: 716 HGIRFDLQY-CAAAAIAQGYPDVLKRPASDPVF--SLPVQSIAKLKPARDLVYLRRSIPD 772
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ---NHPK-GSLNTLVANF 317
+ K++ IK WA+ RG+Y G LGG+H+ L+ VC+ N P+ S ++ +F
Sbjct: 773 MTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLVPVCKALANEPEAASTADILTSF 832
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPC------SPHEYCHSNITRSTF 371
F Y+ + W T V+ DP Y + + R P P S+ + ST
Sbjct: 833 FYHYSTFDWETGVVF-DPF-----YHRDLKYHRTFREPLCLLGWHGPSLNTASSASISTV 886
Query: 372 YKIRTEFLRGHN-TTRDLMRPDFDWHFLFEPFPYS---KKYARFVRVYLS---------A 418
+ +E R ++D M P S K A F+ Y +
Sbjct: 887 NALASELTRAAALLSQDGMTWSKFLGLELSGTPSSLIEKGAADFLDSYQTYIKISARYWG 946
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPN--PTEYIDVDVT 462
S+Q ++GW++SRF S+++ + P P +ID D T
Sbjct: 947 SSQQKGRKYLGWLESRFISILVDISRKTLGLVPRIWPARFIDEDQT 992
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 164/401 (40%), Gaps = 50/401 (12%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIA-ETHA---- 139
SL + M + PS EE KR+ LK I+L + + + A ET A
Sbjct: 653 SLTEAMAELNIFPSHEEISKRKAAFHALKIILLDNPPPNQYPQAVTDTTTASETQARSNQ 712
Query: 140 ---TILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK---SRPEVSE--- 190
I GS+ LGVH S SDID L +GP F+T FF + L+ S P S
Sbjct: 713 PPLIITPVGSFALGVHTSSSDIDVLAIGP-FST--NTFFSLAIQRLRRASSSPLFSSYQP 769
Query: 191 --IHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLS-VPENVDVLNPF-FLRDLDETSWKS 245
+ + + ++ + I DL Y H+ S P + P + L +
Sbjct: 770 KILRRIYSSTGTMLELSVNQIKFDLQYCPAAHIASNWPRILSTAPPGNAVWSLPALTLTK 829
Query: 246 LSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV---- 301
L R + + VPDL F+ R ++ WAK RGVY G+LGG+ +++++A V
Sbjct: 830 LKAARDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARVYKAL 889
Query: 302 --CQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLP-------AAG----YPSETRS 348
Q + + LVA+FF+ YA + W M+ D + P G Y +R
Sbjct: 890 ALTQGVTRVGVEELVASFFEEYARFHWGRD-MVYDEVCPWFRQKREKGGEKEVYRRTSRE 948
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNT-TRDLMRPDFDWHFLFEPFPYSKK 407
M + P + + ++ EF R + ++ +R W E +++
Sbjct: 949 AMVVLGWFGPGLNTSGQASVWSVRTLKEEFERARDQLVKEEVR---SWKEFLEGSSAAEE 1005
Query: 408 YARFVRVYLSASNQ------DDLGDWVGWVKSRFRSLILKL 442
+ + Y+ Q +VGW++SR L++ L
Sbjct: 1006 FLTGYKSYVKVDVQYWGLSPSRGAQFVGWLESRLVMLLVDL 1046
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT---- 140
SL + M ++PS EE DKR+ Q LK I+L + + +
Sbjct: 718 SLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPPTTDLTTTSETQPRSN 777
Query: 141 -----ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK---SRPEVSEIH 192
I GS+ LGVH S SDID L +GP F+T FF + L+ S P S+ H
Sbjct: 778 QPPLIITPVGSFALGVHTSSSDIDVLAIGP-FSTTT--FFSLAIQRLRRASSSPLYSQEH 834
Query: 193 C------VKDAKVPLMRFKFDGILIDLPYA-CLHVLS-VPENVDVLNPF-FLRDLDETSW 243
+ + ++ I DL Y H+ S P + P + L +
Sbjct: 835 QPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVWSLPALTL 894
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
L R + + VPDL F+ R ++ WAK RGVY G+LGG+ +++++A V +
Sbjct: 895 TKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYK 954
Query: 304 -------NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLP 338
+ LVA+FF+ YA + W M+ D + P
Sbjct: 955 ALALGAGGVSGVGVEELVASFFEEYAQFDWEKD-MVYDEVCP 995
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 296 ILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPA---AGYPSETR 347
+LVA CQ +P +TLV FF ++ W WP PV+L+ P LP PS+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKK 407
LMPI P P + N++ ST + EF +G T +++ +W LF+ + +K
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQK 120
Query: 408 YARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
Y ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 121 YKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 171
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 292 VHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ------------DPMLPA 339
V A++VA +CQ +P + +VA FF+ W WP P++L+ +P L
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKL-- 58
Query: 340 AGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF 399
YPS+ MPI P P NIT ST I E +R +M W LF
Sbjct: 59 --YPSDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALF 116
Query: 400 EPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNP 453
+ + +Y ++ + +A + W G V+S+ R L+ +LE V + +P
Sbjct: 117 QKHDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLELVDAIALAHP 170
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT---- 140
SL + M ++PS EE DKR+ Q LK I+L + + +
Sbjct: 679 SLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPSTTDLTTTSETQPRSN 738
Query: 141 -----ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK---SRPEVSE-- 190
I GS+ LGVH S SDID L +GP F+T FF + L+ S P S+
Sbjct: 739 QPPLIITPVGSFALGVHTSSSDIDVLAIGP-FSTTT--FFSLAIQRLRRAASSPLYSQEY 795
Query: 191 ----IHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLS-VPENVDVLNPF-FLRDLDETSW 243
+ + + ++ I DL Y H+ S P + P + L +
Sbjct: 796 QPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVWSLPALTL 855
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
L R + + VPDL F+ R ++ WAK RGVY G+LGG+ +++++A V +
Sbjct: 856 TKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYK 915
Query: 304 -------NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLP 338
+ LVA+FF+ YA + W M+ D + P
Sbjct: 916 ALALGAGGVSGVGVEELVASFFEEYAQFDWEKD-MVYDEVCP 956
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma
FGSC 2509]
Length = 1330
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT---- 140
SL + M ++PS EE DKR+ Q LK I+L + + +
Sbjct: 680 SLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPSTTDLTTTSETQPRSN 739
Query: 141 -----ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLK---SRPEVSE-- 190
I GS+ LGVH S SDID L +GP F+T FF + L+ S P S+
Sbjct: 740 QPPLIITPVGSFALGVHTSSSDIDVLAIGP-FSTTT--FFSLAIQRLRRAASSPLYSQEY 796
Query: 191 ----IHCVKDAKVPLMRFKFDGILIDLPYA-CLHVLS-VPENVDVLNPF-FLRDLDETSW 243
+ + + ++ I DL Y H+ S P + P + L +
Sbjct: 797 QPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVWSLPALTL 856
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
L R + + VPDL F+ R ++ WAK RGVY G+LGG+ +++++A V +
Sbjct: 857 TKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYK 916
Query: 304 -------NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLP 338
+ LVA+FF+ YA + W M+ D + P
Sbjct: 917 ALALGAGGVSGVGVEELVASFFEEYAQFDWEKD-MVYDEVCP 957
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 13/115 (11%)
Query: 202 MRFKFDGILIDLPYA------CLHVLSVPENVDVLNPFFLRDLDE-TSWKSLSGVRANKC 254
MRF+ G+ +DL YA C S P+ + LR LD+ + SL+G+R
Sbjct: 1 MRFR--GVQVDLVYAGVCLPWCPTTWSGPQR----DRSVLRGLDDLATAHSLNGIRVADE 54
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
IL+LVP+ F+ +LRC+ WAK RGVY N+ GFLGG+ AILVA +CQ +P S
Sbjct: 55 ILRLVPETAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTS 109
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 235 LRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHL 294
L D+ ++ K L+G+R + +L VP+ + F LR IKLWAK GVY N GF GG+
Sbjct: 61 LIDVRISNGKILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITW 118
Query: 295 AILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQ 333
AILVA CQ +P + + ++ F ++ W WP+PV+L+
Sbjct: 119 AILVARTCQLYPNAAPSKIIQKVFLVFSTWNWPSPVILK 157
>gi|76154117|gb|AAX25625.2| SJCHGC06256 protein [Schistosoma japonicum]
Length = 166
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Query: 65 SFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA 124
SF P + D + E SL+ + + + EE +RR + +L+EI W+++ A
Sbjct: 28 SFKKPTEQDLKDTQELEASLAQLNIFETQ------EEISQRREALVRLQEISNGWIRQKA 81
Query: 125 WQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKS 184
++ LP T I T+GSY LGV+ +DID+L + P F T E+FF +L
Sbjct: 82 LEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITR-EEFFSDFQTVLAE 140
Query: 185 RPEVSEIHCVKDAKVPLMRFKF 206
P V ++H V DA VP+++ KF
Sbjct: 141 NPNVEDLHAVVDAFVPVLKMKF 162
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 280 GVYGNLHGFLGGVHLAILVAHVCQNHP-----------KGSLNT---LVANFFKTYAYWP 325
G+Y N GFLGG ++LVA+VC+N G L+ L+A FF+ Y +W
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 326 WPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
W PV + A P MPI P P N+ RST +++ EF R + T
Sbjct: 753 WQQPVAITPG--SARYKPGHKSDKMPIVTPTPPFNNSARNVARSTLTEMQQEFFRAFDIT 810
Query: 386 RD-LMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
+ + + L +P + K Y ++ V + + + D++ +GW++SR +LI LE+
Sbjct: 811 QAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRLIALIFDLEK 870
Query: 445 V-QGLCDPNPTEYIDV 459
Q P P ++++
Sbjct: 871 NPQTYARPFPGTFVNL 886
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 181/433 (41%), Gaps = 56/433 (12%)
Query: 64 PSFNFPLNPSVLDQMD-EERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKR 122
P+F L+ + L + EE SLV + G P+T E + R+ I L+ I++
Sbjct: 578 PNFQVNLHKAALSLGNFEELKASLV----SSGQFPTTAEANLRKEAIDLLQRILIEEDAT 633
Query: 123 VAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF-VVLHNM 181
A K Q+ ++ GS+GLGV SDID LC+G +T FF + + +
Sbjct: 634 AAVAETRSKVQL-----VLIPVGSFGLGVWTDLSDIDCLCVG-NISTRV--FFNLAVQKL 685
Query: 182 LKSRPE-VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-----NPFFL 235
K+ E V + V ++ + GI DL Y C DVL +P F
Sbjct: 686 RKASAEGVKILRRVMANTGTMLELEIRGIKFDLQY-CAAAAIAQGYPDVLKRPSSDPVFA 744
Query: 236 RDLDETSWKSLSGVRANKCILQL---VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV 292
L ++L+ ++ + + L +PD+ K++ IK WA+ RG+Y +G LGG+
Sbjct: 745 LPL-----QTLAKLKPARDLFYLRRSIPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGI 799
Query: 293 HLAILVAHVCQ---NHPKG-SLNTLVANFFKTYAYWPWPTPVMLQDPMLP-AAGYPSETR 347
H++ ++ +C+ N + S ++ FF+ Y+ + W T M+ DP Y R
Sbjct: 800 HISSMLVPICKALANESEAVSTADILTTFFQHYSKFNWETG-MVFDPFYHLGLKYHRTFR 858
Query: 348 SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLF----EPFP 403
+ + P S + ST + +E +R + D W P
Sbjct: 859 EPLCLLGWHGPSLNAASTASISTVNALTSELVRAAAL---FHQQDVTWSRFLGLEQSATP 915
Query: 404 YS---KKYARFVRVYLS---------ASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDP 451
+ K A F+ Y S S+Q ++GW++SR S+++ + P
Sbjct: 916 LTLIEKGAADFLNSYRSYIKISARYWGSSQQKGRKYLGWLESRCISILVDISRKSPSLIP 975
Query: 452 N--PTEYIDVDVT 462
P + D D T
Sbjct: 976 RMWPARFADEDPT 988
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 39/258 (15%)
Query: 89 LMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHAT-------- 140
+ + + PS E+ +KR+ + LK ++ LP+ ETH T
Sbjct: 632 FLADRSIFPSPEDAEKRKAAFECLKHLIQ--------HGSLPES--GETHETERSNFSFI 681
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE--VSEIHCVKDAK 198
+ GSYGLGV + SD+D LC+GP + FF + L+ + V + VK A
Sbjct: 682 VTAVGSYGLGVWTNSSDVDCLCVGP---VSSRTFFELAMQRLRKGADSGVKILRKVKAAT 738
Query: 199 VPLMRFKFDGILIDLPYA--------CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+ + G+ DL Y L V +P +P F DL S L R
Sbjct: 739 GTMWELEVRGVKFDLQYCPAGAVAERWLEVSHLPR----ADPLF--DLAYLSLVKLQPHR 792
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP--KG 308
+ + + + F+ + R IK WAK RG+Y + G+LGG+H+ ++++ + + P
Sbjct: 793 DQTYLQRTIQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTA 852
Query: 309 SLNTLVANFFKTYAYWPW 326
S+ ++ FF YA + W
Sbjct: 853 SVADILRTFFNHYADFYW 870
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 102/232 (43%), Gaps = 35/232 (15%)
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGP--EFATMAED--------FFVVLHNMLK 183
+ E IL YGS L ESD D + + + E+ F L L
Sbjct: 345 LNECDYLILQYGSSFLMAETQESDYDLILVNKLNDLQQTCENSDLIRQQFLFEKLAEQLN 404
Query: 184 SRPEVS--EIHCVKDAKVPLMRFKF-DGILIDLPYACLHVLSVPENVDVLNPFFLRDLDE 240
+ EI +K AKVP+++ K+ I IDL A V + E + ++ D
Sbjct: 405 MNFTIKNLEIFKIKHAKVPILKMKYKQQINIDLSLAI--VCNTEEKLSQISIQNYLLFDN 462
Query: 241 TSWKSLSGVRANKCILQLVP----DLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAI 296
S S++ V ++ I LV + E F L+ +K WA+RR VYG +G+LGG+ AI
Sbjct: 463 QSEVSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQYGYLGGIAFAI 522
Query: 297 LVAHVCQ------------NHP----KGSLNTLVANFFKTYAYWPWPTPVML 332
L A++ Q N P K L + FFK Y+ W WP P++L
Sbjct: 523 LCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPIIL 574
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 141 ILTYGSYGLGVHGSESDIDALCLGPEFATMA--EDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+L +GS + + SDID + L + A + VL M R + + D+
Sbjct: 98 LLVFGSTLMEITTPTSDIDTVVLVSDVKRSAYMKRVQKVLTEMEPFRSYCDDFSLLADSL 157
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRD--------------------L 238
VP ++ + G +D+ +A L + E D + R +
Sbjct: 158 VPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQAEVHRVCTAGLLEPEGSAAADWSNSLV 217
Query: 239 DETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILV 298
D+ + +SL+GVR + +L+ P L ++ VLR +K+WAK RG+Y N+ G+ GGV AILV
Sbjct: 218 DDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWAILV 277
Query: 299 AHVCQNHP--------KGSLNTLVANFFKTYAYWPWPT--PVMLQDPML 337
+ V Q++ + ++ ++ FF + PW + PV D +L
Sbjct: 278 SKVMQDNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEIL 326
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 35/145 (24%)
Query: 119 WVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
WVKR+ QR + + E +A I T+GSY LGVHG +DID LC+GP + +
Sbjct: 57 WVKRLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSY----------V 106
Query: 179 HNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDL 238
+ L EV+E+ V DA VP ++D+ N L ++
Sbjct: 107 NRELAEMEEVTELQPVPDAHVP-------------------------DLDISNGSVLYEV 141
Query: 239 DETSWKSLSGVRANKCILQLVPDLE 263
DE + +SL+G R IL+LVP++E
Sbjct: 142 DEQTVRSLNGCRVADQILKLVPNVE 166
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 395 WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE-EVQGL--CDP 451
W LFEP+ + + Y +++V + A++ DL W GWV+SR R L LK+E + G+ C P
Sbjct: 218 WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDTDGMLQCHP 277
Query: 452 NPTEYIDVDVTEPHIVFYWGLQ 473
P EYID H F+ GLQ
Sbjct: 278 YPNEYIDPSKQCAHCAFFMGLQ 299
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Query: 211 IDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK-FQPVL 269
+D+ + + + P + +L+ FL + + S++G+R + + +P K F VL
Sbjct: 3 VDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLPVPHKVFATVL 62
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW----P 325
+ +K WA RR VYGN++ + G AI+VA VCQ P + L+ FF Y W
Sbjct: 63 KAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSRHD 122
Query: 326 WPTPVML--------QDPMLPAAGYPSET---RSLMPIRLPCSPHEYCHSNITRSTFYKI 374
+PV L + P LP + P++ R L P+ P P+ SN+ R +
Sbjct: 123 HISPVYLTATLESRGRIPGLPESWKPAKNECFRDLFPVISPAYPYVNDASNVGRCGLESL 182
Query: 375 RTEFLRGHN--TTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQD------DLGD 426
+E + + D + + W P+ + +A F+ V +S+ D LG
Sbjct: 183 YSEITQAQRVISASDTLSLEKLW----RPYCIMEDFAHFLLVEVSSLGDDMADAERILGR 238
Query: 427 WVGWVKSRFRSLILKLEE 444
W +V S+ R LI +E
Sbjct: 239 WGSYVGSKLRFLIYSVER 256
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/62 (58%), Positives = 44/62 (70%)
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK 307
G+R IL+LVPD F+ +LRC+K WAK RGVY N+ GFLGG+ AILVA VCQ +P
Sbjct: 10 GIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPN 69
Query: 308 GS 309
S
Sbjct: 70 TS 71
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 125/315 (39%), Gaps = 32/315 (10%)
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GS +G +D+D + P A L ++ + E ++ V A+VP +R
Sbjct: 596 GSRRMGCALPGADLDLVAALPGTAE--------LTSVQRELREAVDVREVVGARVPGLRL 647
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLE- 263
+ DG+ +DL L E V +L E + +LS V + +L V E
Sbjct: 648 RLDGVNVDLAVVATGSLDPVEAVARRT-----ELGEAAAVALSAVSDAEAVLASVGGHEP 702
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAY 323
F + R +K WA+ RG+ G L G+ ++L A + L+ +FF T+A
Sbjct: 703 AFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGDLPPDGLLRHFFATWAA 762
Query: 324 WPWPTPVMLQDPMLPAAGYPSETRSLMPIRL--PCSPHEYCHSNITRSTFYKIRTEFLRG 381
W W PV G P T +P+ + P +P C +T I E R
Sbjct: 763 WDWREPV----------GGPGGTSGRLPLTIVTPSAPVRPCTDQVTTGMRDLITQELFRA 812
Query: 382 HNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILK 441
+L+ W L P P +++A + V + + G V+ R R+L+
Sbjct: 813 W----ELLEEGSSWADLLTPPPLHRRHAAWAIVTVGGGPAGVADE--GRVRGRMRALVTD 866
Query: 442 LEEVQGLCDPNPTEY 456
L EV C P +
Sbjct: 867 LAEVAPGCHAWPRPF 881
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 43/70 (61%)
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLV 314
IL+LVP++ F LR IKLWAK G+Y N+ G+LGGV AILVA CQ +P LV
Sbjct: 7 ILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNTGPARLV 66
Query: 315 ANFFKTYAYW 324
FF Y W
Sbjct: 67 QKFFLLYTKW 76
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 134/343 (39%), Gaps = 34/343 (9%)
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GS +G + +D+D + P +A+ V + + P+ + + V A+VP +R
Sbjct: 624 GSRRMGCALAGADLDLVAALPGGVDLAD----VRARVTAALPDGTRVRQVTGARVPGLRL 679
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLE- 263
+ + +DL L E V +LD+ + +LS V + V D
Sbjct: 680 RTGDLDVDLVVVATGTLDPGEAV-----ARRAELDQAAAIALSAVSDADAVRAAVGDHHT 734
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAY 323
F + R +K WA RG+ G L G+ ++L A + + L+ +FF T+A
Sbjct: 735 AFTRLARQVKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLLRHFFGTWAA 794
Query: 324 WPWPTPVMLQDPMLPAAGYPSETRSLMPIRL--PCSPHEYCHSNITRSTFYKIRTEFLRG 381
W W PV L P+ T P+ L P P C + + E R
Sbjct: 795 WDWRDPVGLA---------PTGTGPHTPVVLMTPTDPVRNCTGQVGAGFRDLLTDELYRA 845
Query: 382 HNTTRDLMRPDFD-WHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
D + W L P +++A + + + ++ + G V+ R R+L+
Sbjct: 846 WTILETAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPAEEFEETSGRVRGRLRALLT 905
Query: 441 KLEEVQGLCD----PNPTEYIDVDVTEPHIVFYWGLQPGRTNL 479
LE+ G D P P E T P V Y + GRT L
Sbjct: 906 ALEDA-GAADAYAWPRPFE------TGPGFVRY-AIGLGRTPL 940
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 138/383 (36%), Gaps = 51/383 (13%)
Query: 83 SLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVL----AWVKRVAWQRRLPKEQIAETH 138
SL ++ E VP E D+ +++ +V V VA RR+
Sbjct: 546 SLGTGEVRWAEEAVPHAPEGDREAGTADRVRRLVADALPGGVVHVAGSRRM--------- 596
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
G + G++ D+ A G V L ++ + SE+ V A+
Sbjct: 597 ---------GCALPGADLDLVAALPG----------TVELGSLRRELGGASEVREVVGAR 637
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP +R +FDG+ +DL + E VD S S A + +
Sbjct: 638 VPGLRLRFDGLDVDLAVVATGAMDPGEAVDRRAELGEAAALALSAVS----DAEAVLASV 693
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
F + R +K WA+ RG+ G L G+ ++L A + L+ +FF
Sbjct: 694 GGRGPAFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPSCLLRHFF 753
Query: 319 KTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEF 378
T+A W W PV G + + P +P C +T I E
Sbjct: 754 ATWAAWDWREPV---------GGLEGAPAGPLTVATPSAPVRSCTDQVTADMRDLITQEL 804
Query: 379 LRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
R +L+ W + P P +++A + V + + D + D G V+ R R+L
Sbjct: 805 FRAW----ELLEEGASWTEVLAPPPLHRRHAAWA-VVTAGAGTDGVVD-EGRVRGRMRAL 858
Query: 439 ILKLEEVQGLCDPNPTEYIDVDV 461
I L + C P + V
Sbjct: 859 ITDLAGLAPGCHAWPRPFATAPV 881
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 123/304 (40%), Gaps = 38/304 (12%)
Query: 145 GSYGLGVHGSESDID---ALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
GS +G +D+D AL PE A V + + PE + + V A+VP
Sbjct: 31 GSRRMGCELPGADLDLVAALPGSPELAG-------VRARLTAALPEATGVREVVGARVPG 83
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
+R G+ +DL + E V +L E + +LS V +L V D
Sbjct: 84 LRMSVGGLAVDLVVVATGAVDPAEAVGRRT-----ELGEDAAIALSAVSDADALLDQVAD 138
Query: 262 L-EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKT 320
E F + R +K WAK RG+ G L G+ ++L A + + L+ +FF T
Sbjct: 139 RREAFTDLARRVKAWAKARGLDSAPFGGLPGLAWSVLAARTVREAGALPSDELLRHFFAT 198
Query: 321 YAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLR 380
+A W W PV G P+ M + P +P C +T I E R
Sbjct: 199 WAAWDWREPV----------GGPARPDLPMTVMTPTAPVRPCSDQVTEGMRDLITQELFR 248
Query: 381 GHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLIL 440
+++ DF L P P +++A + V ++ ++ G V+ R R+L+
Sbjct: 249 AW----EVLDGDFP-PPLLAPPPMHRRHAAWAVVTVAPGDE-------GRVRGRMRALLT 296
Query: 441 KLEE 444
L +
Sbjct: 297 SLPQ 300
>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
Length = 199
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 71 NPSVLD---QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQR 127
+P LD + D ++ +V+L+ + L + + KR V+ + ++ +V ++ +
Sbjct: 13 DPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELSISQ 72
Query: 128 RLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE 187
+ +E+ E + + T+GSY LGV SDID + L P+ T E FF + L+
Sbjct: 73 GINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNVT-REIFFNEFYLKLQQDRN 131
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVL-NPFFLRDLDETSWKSL 246
V ++ + + P+++F +D + IDL A L ++ + L N + L++LDE + +SL
Sbjct: 132 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSL 191
Query: 247 SGVRA 251
+G+R
Sbjct: 192 NGIRV 196
>gi|449673865|ref|XP_004208051.1| PREDICTED: poly(A) polymerase alpha-like, partial [Hydra
magnipapillata]
Length = 144
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P+N S ++DEE + SL + + + G+ + E+ R V++KL ++ L W+ + + +
Sbjct: 22 PINLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMVVLEKLNKLALEWIVKTSIAKN 81
Query: 129 LPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEV 188
+P+ I T+GS+ LGVH +DID L + P A DFF + LK+R E
Sbjct: 82 MPESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIERA-DFFGSFYEFLKNREET 140
Query: 189 SEI 191
++
Sbjct: 141 KDL 143
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVC--QNHPKGSLNT-- 312
+ +PDL F+ R IK+WA+RRG+Y + G+LGG+H+ +L+A +C G+++
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLP---CSPHEYCHSNITR- 368
++ FFK YA + W V+ DP Y S R P R P S H+ N+ R
Sbjct: 66 IITTFFKHYAQFNWEKQVVY-DPSF----YKSPPRYFRPQREPLVILSQHQ-PKVNVARA 119
Query: 369 STFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDW- 427
++ RT + L + D W L S F++ Y S + + ++ W
Sbjct: 120 ASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYA-KVNVQYWG 178
Query: 428 ---------VGWVKSRFRSLILKLEEVQGLCDPNPT 454
VGW++ R SL++ G P PT
Sbjct: 179 GAATKGRMLVGWLEWRCVSLLV------GRLHPLPT 208
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD 157
S EE R V+ KL +V W+K + QR +P ++++GSY LGVH S +D
Sbjct: 44 SKEESMTRIKVLSKLNALVKQWIKTLTAQR-IPNGHELNAGGKLISFGSYRLGVHNSGAD 102
Query: 158 IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLM 202
IDAL + P DFF ML V + CV++A VP+M
Sbjct: 103 IDALVIAPRHVARL-DFFTSFKKMLLENSSVKNLACVENAFVPIM 146
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
LMPI P P + N+++ST + I+ E + W+ LFE + +Y
Sbjct: 169 LMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSATWNNLFEEVNFFSRY 228
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE---EVQGLCDPNPTEYIDVDVTEPH 465
FV + ++ + + G+ +SR R L+ +E +V+ L NP ++ V
Sbjct: 229 RHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVK-LAHINPKKFKSVQNAS-- 279
Query: 466 IVFYWGLQ-PGRTNLLDIVAVEKDFLKNIHNGFQGSPGRMGLLVVQASQLSKSSQL-DFG 523
V++ GL+ LD+ A + F KN+ G + V+ S L K + D
Sbjct: 280 -VWFLGLELIENVKNLDLTAEIEGFKKNVEKQANGIQITLDATYVKRSGLIKWIPVADLK 338
Query: 524 SGRRTKAC 531
GR C
Sbjct: 339 KGRFVNKC 346
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 122/311 (39%), Gaps = 30/311 (9%)
Query: 148 GLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFD 207
G + G++ D+ A GP D V + + PE S + V+ +VP +
Sbjct: 600 GCALPGADLDLVAALPGPI------DLDAVEVQVRSALPEASTVRRVEAIRVPCLELCAV 653
Query: 208 GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLV-------- 259
G+ DL + PE+ +L E + +LS V +L+ V
Sbjct: 654 GLDADLTLVDAGAVR-PEHAVARR----LELGEAAAMALSAVTDADALLEAVDAASAPSA 708
Query: 260 --PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
E F + R +K WA+ +G+ G L G+ +L A V + P L++ F
Sbjct: 709 APRRREAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDAPDLEPGPLLSRF 768
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRL--PCSPHEYCHSNITRSTFYKIR 375
F +A W + P+ L DP PA G P + P+R+ P +P C + + +
Sbjct: 769 FGAWAAWDFRRPIAL-DPSAPAVGTPGD-----PVRIATPTAPVRSCSDTVGAAALATLS 822
Query: 376 TEFLRGHNTTRD-LMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
E L L P P +++A + + + A + + +GWV+ R
Sbjct: 823 DELYSAWEAVESALAAGRDPLPDLLAPPPLHRRHAAWAVITVEAPEPEGVASGLGWVRGR 882
Query: 435 FRSLILKLEEV 445
R+L+ E
Sbjct: 883 IRALLSSFERA 893
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 119/311 (38%), Gaps = 32/311 (10%)
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GS +G +D+D + P +A V + K+ PE +++ V A+VP +R
Sbjct: 645 GSRRMGCALPGADLDLVAALPGTVELA----AVQAELSKALPEAADVREVVGARVPGLRL 700
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEK 264
+ D + +DL + E VD + + + A+ +
Sbjct: 701 RLDRLDVDLVVVATGSMDPAEAVDRRVELG----EAAAVALSAVSDADAVLASAGAHGPA 756
Query: 265 FQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW 324
F + R +K WA+ RG+ G L G+ ++L A L+ +FF T+A W
Sbjct: 757 FARLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLRHFFATWAAW 816
Query: 325 PWPTPVMLQDPMLPAAGYPSETRSL-MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHN 383
W TPV G ++ +L + I P +P C +T + E R
Sbjct: 817 DWRTPV----------GPAGQSHALPLTITTPSAPIRPCTDQVTAGMRDLVTQELFRAWE 866
Query: 384 T-----TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSL 438
T R + W L P P +++A + V + D+ G ++ R RSL
Sbjct: 867 VLEGAPTDPTAR--YPWAELLAPPPLHRRHAAWA-VVTAGPGADE-----GRLRGRTRSL 918
Query: 439 ILKLEEVQGLC 449
I L E C
Sbjct: 919 ITDLAETTPDC 929
>gi|414870032|tpg|DAA48589.1| TPA: hypothetical protein ZEAMMB73_581254 [Zea mays]
Length = 231
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 71 NPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
+PS+L ++D RS SLVQ + +EG+V S E+E+KR VI++LK+IV+ W VA+++ +P
Sbjct: 152 HPSLLVEVDHRRSSSLVQFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVP 211
Query: 131 KEQIAETHATILTYGSYGLG 150
+ A +LTY SY LG
Sbjct: 212 Q---GLATAIVLTYDSYTLG 228
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 52/335 (15%)
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF 204
GS +G +D+D + P AE V + + PE + V+ A+VP +RF
Sbjct: 301 GSRRMGCARPGADLDLVAALPGAVGGAE----VRERIAAALPEAERLREVRGARVPGLRF 356
Query: 205 KFDGILIDLPYACLHVLSVPENVDVLNPFFLR-DLDETSWKSLSGVRANKCILQLV-PDL 262
+ G+ +DL V+ +D R +L E + +LS V + + V +
Sbjct: 357 RVAGLDVDL------VVVATGGLDPAGALARRAELGEAAAVALSAVSDADAVRESVGAEH 410
Query: 263 EKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN---------HPKG-SLNT 312
F + R +K WA+ RG+ G L G+ A+L A + P G SL+
Sbjct: 411 AAFARLAREVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALSPDGLSPDGLSLDG 470
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
L+ FF +A W W PV L P PA G + + + P P C + +
Sbjct: 471 LLREFFGAWAAWDWCDPVALHHPP-PAPG----SEGAVTVLTPSEPVRSCTAQVG----- 520
Query: 373 KIRTEFLRGHNTTRDLMRPDF--DWHF--LFEPFPYSKKYARFVRVYLSASNQDDLGDWV 428
RDL+ + W P P+ +++A + V + + + + +
Sbjct: 521 ----------PGLRDLLGRELYEAWESPQAGPPAPH-RRHAAWAVVTVRGATPQEFEESL 569
Query: 429 GWVKSRFRSLILKLEEVQGLCD----PNPTEYIDV 459
G + R R+L+ LEE G+ + P P E D
Sbjct: 570 GRTRGRLRALLGALEE-GGVAEAHAWPRPFERGDT 603
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ P EE +RR + LK ++L + RL ++ ++ GSY LGV +
Sbjct: 366 VTPGEEEAAQRREAFELLKTLLLDATTKTPAAARL------QSFVVVVPVGSYALGVWTT 419
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPE-VSEIHCVKDAKVPLMRFKFDGILIDL 213
SDID C+GP + F V ++ K+ + V + VK ++ + G+ +DL
Sbjct: 420 SSDIDVCCIGPFSSNTL--FSVASSSLRKAATQGVRNLRRVKANTGTMLELEVQGVRMDL 477
Query: 214 PYACL--------HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
Y +VL +P +P + L + L +R + + +PD+E F
Sbjct: 478 QYCPAASVAQQWPNVLRLPAK----DPVW--SLAPQTLNKLKAIRDIDYLRRSLPDIESF 531
Query: 266 QPVLRCIKLWAKRRGVY 282
+ R IK WA+ RGVY
Sbjct: 532 RLAHRFIKTWARSRGVY 548
>gi|341888961|gb|EGT44896.1| hypothetical protein CAEBREN_24044 [Caenorhabditis brenneri]
Length = 224
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 20/130 (15%)
Query: 100 EEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDID 159
E+ +KR VI+KL +I W+K + R+ K +T + +G Y LGVH S DID
Sbjct: 14 EDTEKRVTVIKKLTDIGNTWIKMII-ASRVSKGSNVKTEGKCVAFGFYWLGVHSSGGDID 72
Query: 160 ALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLH 219
++ + P ++ +++ +A V LM + DG+ +DL AC+
Sbjct: 73 SVLIAPS-------------------SKIKKLNAAGNAFVLLMTMECDGVEVDLLIACMD 113
Query: 220 VLSVPENVDV 229
+ ++P N+D+
Sbjct: 114 LATIPANLDL 123
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 349 LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKY 408
LMPI P P + N++ ST + EF +G T ++++ DW L EP + +KY
Sbjct: 5 LMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKY 64
Query: 409 ARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
++ + SAS +++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 65 RHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 114
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 326 WPTPVMLQDPMLPAA--------------------GYPSETRSLMPIRLPCSPHEYCHSN 365
WP PV+L++ + A PS LMPI P P + N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVY-LSASNQDDL 424
+T+S+ I E G T D+M+ W LFE + +Y F+ + LSA+ QD+L
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDEL 156
Query: 425 GDWVGWVKSRFRSLILKLEEVQGL 448
W G V+S+ R LI LE + +
Sbjct: 157 V-WCGLVESKIRFLIASLERRESI 179
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 117/337 (34%), Gaps = 75/337 (22%)
Query: 134 IAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC 193
+A + GS G + D+D + + +AE V L P S +
Sbjct: 566 LAAALGEVHVVGSRRTGCALPDGDLDLITVASAADAVAERVRVAL-------PAASALRP 618
Query: 194 VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANK 253
V A+ P R G+ +DL A NP +W SL A
Sbjct: 619 VVGARSPGWRLDVGGLGVDLTVAVAG-----------NP--------AAWSSLGDAEA-- 657
Query: 254 CILQLVPD-LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT 312
+L V D +++F+ + R +K WA+ RG+ G + GV A+L A + G
Sbjct: 658 -VLAAVGDRVDRFRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFDGG 716
Query: 313 LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFY 372
+A FF T+A W W P+ L P T + + I P +P C +
Sbjct: 717 GLAEFFGTWAAWDWRDPIGL-------GAVPERTGAPVTIMTPAAPVRSCTEQVGPGFRD 769
Query: 373 KIRTEFLRGHN----------TTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQD 422
+ E R T DL R W + P
Sbjct: 770 LLTAELYRAWEVVEAGGTDLATPPDLHRVHAAWAVVTVPH-------------------- 809
Query: 423 DLGDWVGWVKSRFRSLILKLEEVQGLCD----PNPTE 455
D VG V+ R R+L+ L E G+ D P P E
Sbjct: 810 ---DRVGPVRGRLRALLTAL-ETAGVADADAWPRPFE 842
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 62.0 bits (149), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 268 VLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
+LRC+K WAK RGVY N+ GFLGG+ AILVA VCQ +P S
Sbjct: 1 MLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTS 42
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 174 FFVVLHNMLK--SRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLS----VPENV 227
FF + LK + +V + V+ ++ GI +DL Y ++ P ++
Sbjct: 616 FFTLAVKHLKNAAAQDVRILRKVEAHSGTMLELNIQGIRLDLQYCAAAQIAGCWPAPLSL 675
Query: 228 DVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHG 287
+P F L S L +R + PDL FQ R + +WA+ RG+Y G
Sbjct: 676 PPTDPLFSLPLQTLS--KLKAIRDLAHLQNTTPDLPAFQMAYRLLVVWARSRGIYAARFG 733
Query: 288 FLGGVHLAILVAHVCQ----NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM---LPAA 340
+L G H+++++ + + ++ + LV FF+ YA + W + ++DP+ +P
Sbjct: 734 YLSGTHISLMLDRIAKLLYHSNRDVTAADLVCAFFRYYAEFDW-SKNTVEDPLARAIPGM 792
Query: 341 GYPSETRSLMPI 352
G P + + P+
Sbjct: 793 GRPYQRHASEPM 804
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 350 MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYA 409
MPI P P + N++ ST + EF +G T ++++ DW L EP + +KY
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60
Query: 410 RFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
++ + SAS +++ +WVG V+S+ R L+ LE E L NP +
Sbjct: 61 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 109
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 268 VLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
+LRC+K WAK RGVY N+ GFLGG+ AILVA +CQ +P S
Sbjct: 1 MLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTS 42
>gi|414884998|tpg|DAA61012.1| TPA: hypothetical protein ZEAMMB73_976724 [Zea mays]
Length = 506
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 86 LVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYG 145
+ Q + +EG+V S E+E+KR VI++LK+IV+ W VA+++ +P+ AT+LTY
Sbjct: 1 MTQFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQ---GLATATVLTYD 57
Query: 146 SYGLGV 151
SY LGV
Sbjct: 58 SYTLGV 63
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 25/203 (12%)
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW----PWPTPVMLQ 333
RR VYGNL+ + GV LAI+VA VCQ P N L+ FF YA W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 334 D--------PMLPAAGYPSETR---SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
P LP + P L+P+ P P+ N++R E H
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDACRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYAH 121
Query: 383 NTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDD------LGDWVGWVKSRFR 436
R L + +++PF Y+ F V ++ + + L W +V S+ R
Sbjct: 122 ---RLLSNSETPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSKLR 178
Query: 437 SLILKLEEVQGLCDPNPTEYIDV 459
L+ LE + P P + DV
Sbjct: 179 ILLYALERIVD-ARPYPQKLNDV 200
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 343 PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPF 402
PS+ LMPI P P + N++ ST + EF +G T +++ +W LFE
Sbjct: 8 PSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAP 67
Query: 403 PYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
+ +KY ++ + SA + +WVG V+S+ R L+ LE
Sbjct: 68 NFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 343 PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPF 402
PS+ LMPI P P + N++ ST + EF +G T +++ +W LFE
Sbjct: 3 PSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAP 62
Query: 403 PYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE--EVQGLCDPNPTEY 456
+ +KY ++ + SA + +WVG V+S+ R L+ LE E L NP +
Sbjct: 63 NFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF 118
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 244 KSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+SL+G R IL LVP+ F+ LR IKLWAKRRG+Y LGG A+LVA CQ
Sbjct: 6 RSLNGCRVTDEILHLVPN--NFRSTLRAIKLWAKRRGIYSTFR-ILGG-SWAMLVARTCQ 61
Query: 304 NHPKGSLNTLVANFF 318
+ +TLV F+
Sbjct: 62 LY-NAIASTLVHKFY 75
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 25/203 (12%)
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW----PWPTPVMLQ 333
RR VYGNL+ + GV LAI+VA +CQ P N L+ FF Y W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 334 D--------PMLPAAGYPSETR---SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
P LP + P L+P+ P P+ N+ R E +
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDACRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYAY 121
Query: 383 NTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDD------LGDWVGWVKSRFR 436
+L P ++EP+ Y+ F V+++ +++ L W +V S+ R
Sbjct: 122 RLLSNLETP---LETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLR 178
Query: 437 SLILKLEEVQGLCDPNPTEYIDV 459
L+ LE + P P + DV
Sbjct: 179 ILLYALERIVD-ARPYPQKLNDV 200
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 24/189 (12%)
Query: 278 RRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYW----PWPTPVMLQ 333
RR VYGNL+ + GV LAI+VA +CQ P N L+ FF Y W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 334 D--------PMLPAAGYPSETR---SLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGH 382
P LP + P L+P+ P P+ N+ R + E +
Sbjct: 62 TSLESRGRIPGLPDSWDPRRDACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAY 121
Query: 383 NTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDD------LGDWVGWVKSRFR 436
+L P ++EP+ Y+ F V+++ +++ L W +V S+ R
Sbjct: 122 RLLSNLETP---LETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLR 178
Query: 437 SLILKLEEV 445
L+ LE +
Sbjct: 179 ILLYALERL 187
>gi|410730487|ref|XP_003671423.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
gi|401780241|emb|CCD26180.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
Length = 582
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 66/296 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE +R + I ++++ V + W A + +GSY ++
Sbjct: 180 ISPSKEEIKERNDTIGRIRDAVNHF-----WN-----------DANLHVFGSYATDLYLP 223
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + + L N LK R ++I + A+VP+++F ID P
Sbjct: 224 GSDIDCVIISEKGDKDSRSSLYALANFLKKRGLATDIEVIAKARVPIIKF------ID-P 276
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ +H+ + S++ ++G+ A K I + + D + + +K
Sbjct: 277 RSKIHI-------------------DVSFERINGLEAAKLIREWLNDTPGLREITLIVKQ 317
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPK---------GSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV Q HP+ +L L+ FF+ Y
Sbjct: 318 FLHARRL-NNVHTGGLGGFSIICLVFSFLQMHPRIISNEIDPMENLGVLLVEFFELYGKN 376
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIR----LPCSPHEYCHSNITRSTF 371
+ + A GYP S+ + L +R L +NI+R +F
Sbjct: 377 FGYDDIAIT----TANGYPIYLPKSDWKGLQQLRSSFSLAIQDPGDATNNISRGSF 428
>gi|385300970|gb|EIF45209.1| poly polymerase [Dekkera bruxellensis AWRI1499]
Length = 122
Score = 55.5 bits (132), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 85 SLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTY 144
++++ + N+ + + KRR V+ L+ IV +V V+ ++ + + + + T+
Sbjct: 30 AMIEELRNQNSFETEDGVQKRRKVLATLQTIVQEFVYTVSRKKNMSEGMSKDAGGKLFTF 89
Query: 145 GSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
GSY LGV+G SDID L + P+ T EDFF V
Sbjct: 90 GSYRLGVYGPGSDIDTLVVVPKHVT-KEDFFTVF 122
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPM-----LPAAG- 341
FLGGV A+LVA CQ +P +TLV FF W WP PV+L+ P LP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 342 --YPSETRSLMPIRLPCSPHE 360
PS+ LMPI P P +
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQ 81
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 326 WPTPVMLQD-----------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKI 374
WP PV+L+ P+ S+ LMPI P PHE +T S+ +
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 375 RTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSR 434
E G + +W LFEP + +KY ++ + +S + D +W G+ +S+
Sbjct: 63 TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122
Query: 435 FRSLILKLE 443
R LI LE
Sbjct: 123 LRLLIGNLE 131
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 350 MPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYA 409
MPI P P + N++ ST + EF +G T +++ +W LFE + +KY
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 410 RFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
++ + SA + +WVG V+S+ R L+ LE+
Sbjct: 61 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEK 95
>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
Length = 665
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 107/287 (37%), Gaps = 48/287 (16%)
Query: 144 YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEI--HCVKDAKVPL 201
+GS G SDID L +F EDFF LKS PEV I + A++P+
Sbjct: 119 FGSGMFGGFDKHSDIDVLLSSFKFLLSREDFFSKFSAYLKS-PEVGAIIHQEIPQAQIPI 177
Query: 202 MRFKFDGILIDLPYACL------HVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI 255
++F+F D+ Y + H E F ++ S G + +
Sbjct: 178 IKFEFMSKQFDVLYCSMLTPISQHQRCQLEKDQYFFEFSNVVQEKVDVFSFRGWSNCQYM 237
Query: 256 LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV-------------C 302
+ + D E F L+ IK WAK++G+YG G+L G+ L I++ V C
Sbjct: 238 YERIKDKEAFGWGLKIIKAWAKKKGLYGFNFGYLNGISLIIMLGKVDKMIRRERFQSDYC 297
Query: 303 QNHPKGSLNT-----------------------LVANFFKTYAYWPWPTPVMLQDP---M 336
+ ++N LV FF+ Y+ W P+ QD
Sbjct: 298 DDTLSRNVNNQLSFTIPNRTLKSNNKIEDRVCELVTKFFEVYSKWDSKQPIFFQDNNSWS 357
Query: 337 LPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHN 383
+ Y + + PI P P++ I S+ I + N
Sbjct: 358 MDQDLYSVCLKEVFPIVTPERPYKCTTHQINTSSLNHIMEQLQTAQN 404
>gi|350632818|gb|EHA21185.1| hypothetical protein ASPNIDRAFT_54692 [Aspergillus niger ATCC 1015]
Length = 1060
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 48/245 (19%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
++E+ LS L + L+PS E +D+RR +++KL+++ +Q +
Sbjct: 139 EDEKRLSADMLEVYDQLLPSAESDDRRRQLVRKLEKLF--------------NDQWPGCN 184
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ T E V L + +R + + CV AK
Sbjct: 185 IKVHVFGSSGNKLCSSDSDVD-ICI---TTTYKELEHVCLLAEVLARHGMERVVCVSHAK 240
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + ++L
Sbjct: 241 VPIVKI-WD---PELRLAC-------------------DMNVNNTMALENTRMVRTYVEL 277
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFF 318
E+ +P+ IK W KRR + + F L L+ + +N K SL L+ FF
Sbjct: 278 D---ERVRPLAMIIKHWTKRRILNDAVCSF--DDDLDSLIGYGRKN--KQSLGELLFQFF 330
Query: 319 KTYAY 323
K Y +
Sbjct: 331 KYYGH 335
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ----NHPKGSLNTLVANF 317
+ K+ +K WAK RG+Y + G LG +++++++ +C+ + P ++ F
Sbjct: 1 MAKYGIAHLLLKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTF 60
Query: 318 FKTYAYWPWPTPVMLQDPMLPAA-GYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRT 376
F Y + W T ++L DP+ Y R M + +P N T ST + +
Sbjct: 61 FHHYRNFDWKTNMVL-DPLFHGTVKYHRTQRESMCLLGWHTPSRNTALNATASTIHILSA 119
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFE------PFP------------YSKKYARFVRVYLSA 418
E +R + L + +W PFP K Y + YL
Sbjct: 120 EIMRASDL---LSQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNASYLGC 176
Query: 419 SNQDDLGDWVGWVKSRFRSLILKLE 443
S + +VGW++SR +++ L+
Sbjct: 177 SPRKG-KRFVGWLESRCLMVLVDLQ 200
>gi|344230457|gb|EGV62342.1| hypothetical protein CANTEDRAFT_126141 [Candida tenuis ATCC 10573]
Length = 615
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 120/294 (40%), Gaps = 60/294 (20%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE R +V++ LK+ + +V W AE H +GS+ ++
Sbjct: 191 ISPSKEEIMARNSVVKTLKQQI-----KVCWPD-------AEAHV----FGSFATDLYLP 234
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + L + L+S+ +I + AKVP+++F +D P
Sbjct: 235 GSDIDMVVVSKNGDCENRHKLYQLSSFLRSKKLAKDIEVIAGAKVPIIKF------VD-P 287
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+H+ + S++ +G+ A + I + + + ++ +K
Sbjct: 288 KTNIHL-------------------DISFERTNGLDAARRIRKWLETTAGLRELVLVVKQ 328
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGS---------LNTLVANFFKTYAY- 323
+ + R + N+H G LGG IL H + HP+ S L TL+ FF+ Y
Sbjct: 329 FLRSRKL-NNVHVGGLGGYATIILCYHFIKMHPRVSTENMTASENLGTLLIEFFELYGRN 387
Query: 324 WPWPTPVMLQD------PMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTF 371
+ + V+ D L YPS S P L + +NITRS++
Sbjct: 388 FSFDNLVIAFDGKTDSPKYLKKYKYPSLIASRNPFALVVQDPDDPGNNITRSSY 441
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 288 FLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV------------MLQDP 335
F GG+ AILVA VCQ P LV FF + W W PV ++
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 336 MLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTT 385
+ Y S+ LMP+ P P N+T +T I E R H T
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKLT 110
>gi|242817783|ref|XP_002487018.1| PAP/25A associated domain family [Talaromyces stipitatus ATCC
10500]
gi|218713483|gb|EED12907.1| PAP/25A associated domain family [Talaromyces stipitatus ATCC
10500]
Length = 1073
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 45/205 (21%)
Query: 75 LDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQI 134
LDQ +EE+ LS + E L+PS E +D+RR ++QKL+++ EQ
Sbjct: 105 LDQ-EEEKKLSAEMQVLYEQLLPSAESDDRRRQLVQKLEKLF--------------NEQW 149
Query: 135 AETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCV 194
+ + +GS G + S+SD+D +C+ F + V L + ++ + + CV
Sbjct: 150 PGNNIDVHVFGSSGNKLCSSDSDVD-ICITTSFKQLEN---VCLLAEVLAQHGMERVVCV 205
Query: 195 KDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKC 254
A+VP+++ +D L AC +++V N L + +
Sbjct: 206 SHARVPIVKI-WD---PQLKMAC--------DMNVNNTLALEN--------------TRM 239
Query: 255 ILQLVPDLEKFQPVLRCIKLWAKRR 279
I V E+ +P+ IK W KRR
Sbjct: 240 IRTYVDIDERVRPLAMIIKHWTKRR 264
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 384 TTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLE 443
TT+++ W LFEP+ + + Y +++V + A++ DL W GWV+SR R L LK +
Sbjct: 28 TTKEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKRK 87
Query: 444 E 444
E
Sbjct: 88 E 88
>gi|403218109|emb|CCK72601.1| hypothetical protein KNAG_0K02380 [Kazachstania naganishii CBS
8797]
Length = 632
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 134/334 (40%), Gaps = 75/334 (22%)
Query: 64 PSFNFPLNPSVLDQMDEERSLSLVQLMTNE------GLVPSTEEEDKRRNVIQKLKEIVL 117
P FN P P +L+Q D + + Q +T E + P+ E R +QK+++ V
Sbjct: 141 PEFN-PNFPWLLNQ-DHSQEKQISQWLTQEIKDFVAYISPTGSEIISRNRAVQKIRKAV- 197
Query: 118 AWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVV 177
R W+ + + +GSY ++ SDID + +
Sbjct: 198 ----RSLWR-----------DSDLHVFGSYATDLYMPGSDIDCVVNSTSMDKENTQYLYE 242
Query: 178 LHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRD 237
L L+ +I + +VP+++F I+ P++ LH+
Sbjct: 243 LARHLRDENLAVQIEVISRTRVPIIKF------IE-PHSNLHI----------------- 278
Query: 238 LDETSWKSLSGVRANKCI---LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLH-GFLGGVH 293
+ S++ L+G+ A + I L+ P L + VL + A RR ++H G LGG
Sbjct: 279 --DVSFERLNGIEAARLIRGWLRETPGLREL--VLIIKQFLAARR--LNDVHTGGLGGFS 332
Query: 294 LAILVAHVCQNHPK---------GSLNTLVANFFKTYA--YWPWPTPVMLQDPMLPAAGY 342
+ LV HPK +L L+ +FF+ Y + + D P
Sbjct: 333 IICLVYSFMNLHPKIRTQEIDPLDNLGVLLIDFFELYGKNFAYDDVALSFNDDHFPVYVP 392
Query: 343 PSETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
S +SL+P+R + P E+ + NI+RS+F
Sbjct: 393 KSHWKSLLPVRNSFALAIQDPMEHSN-NISRSSF 425
>gi|358374739|dbj|GAA91329.1| zinc finger protein, cchc domain containing protein [Aspergillus
kawachii IFO 4308]
Length = 1076
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 49/215 (22%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EE+ LS L + L+PS E +D+RR +++KL+++ +Q +
Sbjct: 111 EEEKRLSADMLEVYDQLLPSAESDDRRRQLVRKLEKLF--------------NDQWPGCN 156
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ T E V L + +R + + CV AK
Sbjct: 157 IKVHVFGSSGNKLCSSDSDVD-ICI---TTTYKELEHVCLLAEVLARHGMERVVCVSHAK 212
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + ++L
Sbjct: 213 VPIVKI-WD---PELRLAC-------------------DMNVNNTMALENTRMVRTYVEL 249
Query: 259 VPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
E+ +P+ IK W KRR G+ G L +
Sbjct: 250 D---ERVRPLAMIIKHWTKRRILNDAGLGGTLSSY 281
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 377 EFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFR 436
EF +G T ++++ DW L EP + +KY ++ + SAS +++ +WVG V+S+ R
Sbjct: 7 EFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIR 66
Query: 437 SLILKLE--EVQGLCDPNPTEY 456
L+ LE E L NP +
Sbjct: 67 VLVGNLERNEFITLAHVNPQSF 88
>gi|6324457|ref|NP_014526.1| non-canonical poly(A) polymerase PAP2 [Saccharomyces cerevisiae
S288c]
gi|1717744|sp|P53632.1|PAP2_YEAST RecName: Full=Poly(A) RNA polymerase protein 2; AltName: Full=DNA
polymerase kappa; AltName: Full=DNA polymerase sigma;
AltName: Full=Topoisomerase 1-related protein TRF4
gi|663237|emb|CAA88145.1| ORF [Saccharomyces cerevisiae]
gi|950226|gb|AAC49091.1| Trf4p [Saccharomyces cerevisiae]
gi|1419987|emb|CAA99134.1| TRF4 [Saccharomyces cerevisiae]
gi|51830518|gb|AAU09782.1| YOL115W [Saccharomyces cerevisiae]
gi|285814775|tpg|DAA10668.1| TPA: non-canonical poly(A) polymerase PAP2 [Saccharomyces
cerevisiae S288c]
gi|392296670|gb|EIW07772.1| Pap2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 584
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E V + W A + +GSY ++
Sbjct: 190 ISPSREEIEIRNQTISTIREAV-----KQLW-----------PDADLHVFGSYSTDLYLP 233
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK + +E+ V A+VP+++F P
Sbjct: 234 GSDIDCVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPIIKFV-------EP 286
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 287 HSGIHI-------------------DVSFERTNGIEAAKLIREWLDDTPGLRELVLIVKQ 327
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNH---------PKGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV H PK +L L+ FF+ Y
Sbjct: 328 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELYGKN 386
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 387 FGYDDVALG----SSDGYPVYFPKSTWSAIQPIKNPFSLAIQDPGDES-NNISRGSF 438
>gi|349581056|dbj|GAA26214.1| K7_Pap2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 584
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E V + W A + +GSY ++
Sbjct: 190 ISPSREEIEIRNQTISTIREAV-----KQLW-----------PDADLHVFGSYSTDLYLP 233
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK + +E+ V A+VP+++F P
Sbjct: 234 GSDIDCVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPIIKFV-------EP 286
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 287 HSGIHI-------------------DVSFERTNGIEAAKLIREWLDDTPGLRELVLIVKQ 327
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNH---------PKGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV H PK +L L+ FF+ Y
Sbjct: 328 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELYGKN 386
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 387 FGYDDVALG----SSDGYPVYFPKSTWSAIQPIKNPFSLAIQDPGDES-NNISRGSF 438
>gi|83772230|dbj|BAE62360.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 493
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 49/215 (22%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EE+ L+ L + L+PS E +D+RR +++KL+ RL EQ
Sbjct: 31 EEEKRLTDNMLEVYDRLLPSAESDDRRRQLVRKLE--------------RLFNEQWPGRD 76
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ + + + V L + +R + + CV AK
Sbjct: 77 IKVHVFGSSGNKLCSSDSDVD-ICITTTYKELEQ---VCLLAEVLARHGMERVVCVSHAK 132
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + +++
Sbjct: 133 VPIVKI-WDP---ELQLAC-------------------DMNVNNTLALDNTRMVRTYVEI 169
Query: 259 VPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
E+ +P+ IK W KRR G+ G L +
Sbjct: 170 D---ERVRPLAMIIKHWTKRRILCDAGLGGTLSSY 201
>gi|256271045|gb|EEU06149.1| Pap2p [Saccharomyces cerevisiae JAY291]
Length = 584
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E V + W A + +GSY ++
Sbjct: 190 ISPSREEIEIRNKTISTIREAV-----KQLW-----------PDADLHVFGSYSTDLYLP 233
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK + +E+ V A+VP+++F P
Sbjct: 234 GSDIDCVVTSKLGGKESRNNLYSLASHLKKKKLATEVEVVAKARVPIIKFV-------EP 286
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 287 HSGIHI-------------------DVSFERTNGIEAAKLIREWLDDTPGLRELVLIVKQ 327
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNH---------PKGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV H PK +L L+ FF+ Y
Sbjct: 328 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELYGKN 386
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 387 FGYDDVALG----SSDGYPVYFPKSTWSAIQPIKNPFSLAIQDPGDGS-NNISRGSF 438
>gi|67901522|ref|XP_681017.1| hypothetical protein AN7748.2 [Aspergillus nidulans FGSC A4]
gi|40742346|gb|EAA61536.1| hypothetical protein AN7748.2 [Aspergillus nidulans FGSC A4]
gi|259484098|tpe|CBF80028.1| TPA: PAP/25A associated domain family (AFU_orthologue;
AFUA_5G07790) [Aspergillus nidulans FGSC A4]
Length = 999
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 49/215 (22%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EER L+ L E L+PS E E +RR +++KL+++ + R+ P I
Sbjct: 31 EEERKLTADMLEVYERLLPSAESESRRRRLVRKLEDL---------FNRQWPGCDI---- 77
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ T E V L + ++ + + C+ AK
Sbjct: 78 -KVHVFGSSGNKLCSSDSDVD-ICI---TTTCKELEHVCLLADVLAKNGMERVVCISHAK 132
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + +++
Sbjct: 133 VPIVKI-WD---PELRLAC-------------------DMNVNNTMALENTRMVRTYVEI 169
Query: 259 VPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
E+ +P+ IK W KRR G+ G L +
Sbjct: 170 D---ERVRPLAMIIKHWTKRRILNDAGLGGTLSSY 201
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNT----------LVANFFK 319
R IK WA+ RG+Y G+LGG+ +A+L+A V + + + ++A FF+
Sbjct: 55 RSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILATFFR 114
Query: 320 TYAYWPWPTPVMLQDPML 337
YA + W T M DP
Sbjct: 115 DYAGFDWATQ-MAFDPFF 131
>gi|151945519|gb|EDN63760.1| DNA polymerase sigma [Saccharomyces cerevisiae YJM789]
Length = 584
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E V + W A + +GSY ++
Sbjct: 190 ISPSREEIEIRNKTISTIREAV-----KQLW-----------PDADLHVFGSYSTDLYLP 233
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK + +E+ V A+VP+++F P
Sbjct: 234 GSDIDCVVTSKLGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPIIKFV-------EP 286
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 287 HSGIHI-------------------DVSFERTNGIEAAKLIREWLDDTPGLRELVLIVKQ 327
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNH---------PKGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV H PK +L L+ FF+ Y
Sbjct: 328 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELYGKN 386
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 387 FGYDDVALG----SSDGYPVYFPKSTWSAIQPIKNPFSLAIQDPGDGS-NNISRGSF 438
>gi|190407236|gb|EDV10503.1| DNA polymerase sigma [Saccharomyces cerevisiae RM11-1a]
gi|259149371|emb|CAY86175.1| Pap2p [Saccharomyces cerevisiae EC1118]
Length = 584
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E V + W A + +GSY ++
Sbjct: 190 ISPSREEIEIRNKTISTIREAV-----KQLW-----------PDADLHVFGSYSTDLYLP 233
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK + +E+ V A+VP+++F P
Sbjct: 234 GSDIDCVVTSKLGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPIIKFV-------EP 286
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 287 HSGIHI-------------------DVSFERTNGIEAAKLIREWLDDTPGLRELVLIVKQ 327
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNH---------PKGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV H PK +L L+ FF+ Y
Sbjct: 328 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELYGKN 386
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 387 FGYDDVALG----SSDGYPVYFPKSTWSAIQPIKNPFSLAIQDPGDGS-NNISRGSF 438
>gi|145235221|ref|XP_001390259.1| PAP/25A associated domain family [Aspergillus niger CBS 513.88]
gi|134057940|emb|CAK47817.1| unnamed protein product [Aspergillus niger]
Length = 1076
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 49/215 (22%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
++E+ LS L + L+PS E +D+RR +++KL+++ +Q +
Sbjct: 111 EDEKRLSADMLEVYDQLLPSAESDDRRRQLVRKLEKLF--------------NDQWPGCN 156
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ T E V L + +R + + CV AK
Sbjct: 157 IKVHVFGSSGNKLCSSDSDVD-ICI---TTTYKELEHVCLLAEVLARHGMERVVCVSHAK 212
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + ++L
Sbjct: 213 VPIVKI-WD---PELRLAC-------------------DMNVNNTMALENTRMVRTYVEL 249
Query: 259 VPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
E+ +P+ IK W KRR G+ G L +
Sbjct: 250 D---ERVRPLAMIIKHWTKRRILNDAGLGGTLSSY 281
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 29/177 (16%)
Query: 305 HPKGSLNTLVANFFKTYAYWPWPTP---------VMLQDPM-----LPAAGYPSETRS-- 348
HP + +V FF+ Y W P P + L + M L P E++S
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64
Query: 349 --LMPIRLPCSPHEYCHSNITRSTFYKIRTEFLRGHN-------TTRDLMRPDFD----W 395
L P+ P P+ N+T + ++ TEF RGH T+ + + F W
Sbjct: 65 MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124
Query: 396 HFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPN 452
L EP + ++ ++ V +S ++ + +V V+S+ R L E +G N
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALEN 181
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 116/299 (38%), Gaps = 42/299 (14%)
Query: 141 ILTYGSYGLG--VHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ T GS +G + G++ D+ A+ GP D V + + P + V A+
Sbjct: 78 VRTVGSRRMGCALPGADLDLVAVLPGPA------DAAGVRARVAAALPGARRLREVTGAR 131
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFL----RDLDETSWKSLSGVRANKC 254
VP +R G+ +DL V L+P +L E + +LS +
Sbjct: 132 VPGLRLHAYGLDVDL---------VLVGAGALDPGLAVARRAELGEAAAVALSALDDADA 182
Query: 255 ILQLV-PDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLN-- 311
+ + V F + R K WA+ RG+ G L G+ A+L A + + + +
Sbjct: 183 VRESVGASHAAFASLAREAKAWARARGLDSAPFGGLPGLAWAVLAARTVREAVRDAADLS 242
Query: 312 --TLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMP----IRLPCSPHEYCHSN 365
L FF T+A W W PV L LPA G RS P + P +P C +
Sbjct: 243 PAGLRREFFGTWAAWDWSEPVSL----LPADGA---GRSPSPDPVTVLTPRAPVRSCTAQ 295
Query: 366 ITRSTFYKIRTEFLRGHNTTRDLMRPDFDW-HFLFEPFPYSKKYARFVRVYLSASNQDD 423
+ + E R +++ D D L P P +++A + V + A +
Sbjct: 296 VGPGMRDLLVRELYRAW----EVLEADPDGLGRLTAPPPLHRRHAAWAVVTVRAGAAGE 350
>gi|317149559|ref|XP_001823493.2| PAP/25A associated domain family [Aspergillus oryzae RIB40]
Length = 1068
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 49/215 (22%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EE+ L+ L + L+PS E +D+RR +++KL+ RL EQ
Sbjct: 111 EEEKRLTDNMLEVYDRLLPSAESDDRRRQLVRKLE--------------RLFNEQWPGRD 156
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ + + + V L + +R + + CV AK
Sbjct: 157 IKVHVFGSSGNKLCSSDSDVD-ICITTTYKELEQ---VCLLAEVLARHGMERVVCVSHAK 212
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + +++
Sbjct: 213 VPIVKI-WD---PELQLAC-------------------DMNVNNTLALDNTRMVRTYVEI 249
Query: 259 VPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
E+ +P+ IK W KRR G+ G L +
Sbjct: 250 D---ERVRPLAMIIKHWTKRRILCDAGLGGTLSSY 281
>gi|302148910|pdb|3NYB|A Chain A, Structure And Function Of The Polymerase Core Of Tramp, A
Rna Surveillance Complex
Length = 323
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 116/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E V + W A + +GSY ++
Sbjct: 32 ISPSREEIEIRNQTISTIREAV-----KQLW-----------PDADLHVFGSYSTDLYLP 75
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK + +E+ V A+VP+++F P
Sbjct: 76 GSDIDCVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPIIKFV-------EP 128
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ S++ +G+ A K I + + D + ++ +K
Sbjct: 129 HSGIHI-------------------AVSFERTNGIEAAKLIREWLDDTPGLRELVLIVKQ 169
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNH---------PKGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV H PK +L L+ FF+ Y
Sbjct: 170 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELYGKN 228
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 229 FGYDDVALG----SSDGYPVYFPKSTWSAIQPIKNPFSLAIQDPGDES-NNISRGSF 280
>gi|269860712|ref|XP_002650075.1| topoisomerase 1-related protein tRF4 [Enterocytozoon bieneusi H348]
gi|220066506|gb|EED43985.1| topoisomerase 1-related protein tRF4 [Enterocytozoon bieneusi H348]
Length = 348
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 52/238 (21%)
Query: 98 STEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKE-QIAETHATILTYGSYGLGVHGSES 156
+ EE R+N+ Q+ K + L KE QI TI +GS+ GV +ES
Sbjct: 51 TKEETAIRQNIYQQFKTV-------------LEKEFQILGYSITIEKFGSFMTGVMINES 97
Query: 157 DIDALCL---GPEFATM--AEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILI 211
DID L +M + +V +L + V EI +K AK P+++
Sbjct: 98 DIDITVLFNKDKRLNSMHPNDILKIVKKVLLINNLCVGEIIHIKKAKTPILK-------- 149
Query: 212 DLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRC 271
C+ S N+ + + S G+ N+ I+ + + + + ++
Sbjct: 150 -----CI---SKKYNIKI----------DISINKKDGIEGNQFIILKLKENPEIKYLIIL 191
Query: 272 IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP-------KGSLNTLVANFFKTYA 322
+K + KRRG+ G L + IL+ H HP K ++ L+ +FF+ Y+
Sbjct: 192 LKYFMKRRGLSNTQIGGLSSLSQFILILHFINLHPLTKSLSIKDNIGVLMMDFFQYYS 249
>gi|53136848|emb|CAG32753.1| hypothetical protein RCJMB04_34p17 [Gallus gallus]
Length = 109
Score = 48.1 bits (113), Expect = 0.012, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 69 PLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRR 128
P++ + + D + L++ + G+ EE +R ++ KL +V W++ ++ +
Sbjct: 24 PISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKN 83
Query: 129 LPKEQIAETHATILTYGSYGLGVH 152
LP+ I I T+GSY LGVH
Sbjct: 84 LPQSVIENVGGKIFTFGSYRLGVH 107
>gi|238495318|ref|XP_002378895.1| zinc finger protein, cchc domain containing protein, putative
[Aspergillus flavus NRRL3357]
gi|220695545|gb|EED51888.1| zinc finger protein, cchc domain containing protein, putative
[Aspergillus flavus NRRL3357]
Length = 1096
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 49/215 (22%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EE+ L+ L + L+PS E +D+RR +++KL+ RL EQ
Sbjct: 139 EEEKRLTDNMLEVYDRLLPSAESDDRRRQLVRKLE--------------RLFNEQWPGRD 184
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ + + + V L + +R + + CV AK
Sbjct: 185 IKVHVFGSSGNKLCSSDSDVD-ICITTTYKELEQ---VCLLAEVLARHGMERVVCVSHAK 240
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + +++
Sbjct: 241 VPIVKI-WD---PELQLAC-------------------DMNVNNTLALDNTRMVRTYVEI 277
Query: 259 VPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
E+ +P+ IK W KRR G+ G L +
Sbjct: 278 D---ERVRPLAMIIKHWTKRRILCDAGLGGTLSSY 309
>gi|256377138|ref|YP_003100798.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
43827]
gi|255921441|gb|ACU36952.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
43827]
Length = 895
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 96/266 (36%), Gaps = 47/266 (17%)
Query: 186 PEVSEIHCVKDAKVPLMRFKFD-GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWK 244
P ++ V A+ P +R + G+ +D+ + V E V R +
Sbjct: 615 PGALDVRVVNGARGPGVRAVVEPGLGVDIAVVGSGGVPVAEAV-------ARRGETGGEV 667
Query: 245 SLSGVRANKCILQLVPD-LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+LS V + I V E+F + R +K WA+ +G+ G L GV ++L A +
Sbjct: 668 ALSAVGDAEAIRAAVTGHEERFTALAREVKAWARVKGLDSAPFGGLPGVAWSVLAAVSAR 727
Query: 304 NHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCH 363
L +FF T+A W W V L PA R M + P SP C
Sbjct: 728 EADDDPLT----HFFGTWAAWDWRRAVSLDGDAGPA-------RGAMTVLTPSSPVRDCA 776
Query: 364 SNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYA----RFVRVYLSAS 419
+ + E R W FP S++ R R + A
Sbjct: 777 GQVGEDFAELLTAELYRA-------------WE-----FPESRRERPELHRRHRAWALAR 818
Query: 420 NQDDLGDWVGWVKSRFRSLILKLEEV 445
D G ++ R R+L+ +L E
Sbjct: 819 ADD-----AGRLRGRVRALLDELAEA 839
>gi|401623740|gb|EJS41828.1| trf4p [Saccharomyces arboricola H-6]
Length = 573
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 116/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E V + W A + +GSY ++
Sbjct: 182 ISPSREEIEVRNQTISMIREAV-----KQLW-----------PDADLHVFGSYSTDLYLP 225
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK + +EI V A+VP+++F P
Sbjct: 226 GSDIDCVITSELGGKESRNNLFSLASHLKKKNLATEIEVVAKARVPIIKFV-------EP 278
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 279 NSGIHI-------------------DVSFERTNGLEAAKLIREWLNDTPGLRELVLIVKQ 319
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHP---------KGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV HP K +L L+ FF+ Y
Sbjct: 320 FLHSRRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITKEIEAKDNLGVLLIEFFELYGKN 378
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P + P + + NI+R TF
Sbjct: 379 FGYDDVALG----SSDGYPVYFPKSTWNAIQPIKNPFTLAIQDPGDESN-NISRGTF 430
>gi|154308271|ref|XP_001553472.1| hypothetical protein BC1G_07881 [Botryotinia fuckeliana B05.10]
Length = 1246
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EER LS +GL+P+ E +++RR ++ KL+++ + + P I
Sbjct: 269 EEERKLSTDMRELYDGLLPTAETDERRRRLVSKLEDM---------FNKEWPGHDI---- 315
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + SD+D +C+ ++ M V + L ++ + ++ CV AK
Sbjct: 316 -RVYVFGSSGNLLCTDASDVD-ICITTDWKVME---GVCMIAELLAKNGMQKVICVSTAK 370
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FD L L D++ + ++L R K +++
Sbjct: 371 VPIVKI-FDPELK----------------------LLCDMNVNNTQALENTRMIKTYIEI 407
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFL 289
P + +P+ IK W K R + + G L
Sbjct: 408 DP---RVRPLAMIIKHWTKSRAINDAVGGTL 435
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 64/175 (36%), Gaps = 48/175 (27%)
Query: 322 AYWPWPTPVMLQDPMLPAAGYPSETR--------------SLMPIRLPCSPHEYCHSNIT 367
A+ WP P++LQ R LMPI P P N+T
Sbjct: 74 AFRKWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVCDRNHLMPIITPSYPSMCSTHNVT 133
Query: 368 RSTFYKIRTEFLRGH-----------NTTR-------DLMRPDFDWHFLFEPFPYSKKYA 409
RST ++ EF+RG N R +M +W LF + +KY
Sbjct: 134 RSTMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHDFFQKYR 193
Query: 410 RFVRVYLSASNQDDLGDW----------------VGWVKSRFRSLILKLEEVQGL 448
++++ S+ +D W G V+SR R L++KLE V L
Sbjct: 194 YYLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLEFVDQL 248
>gi|406604992|emb|CCH43591.1| Poly(A) RNA polymerase protein 1 [Wickerhamomyces ciferrii]
Length = 624
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 116/295 (39%), Gaps = 65/295 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R N ++KL+E ++ W E H +GSY ++
Sbjct: 223 ISPSKEEIELRNNTVRKLREAIMEL-----WPD-------CEVHV----FGSYATDLYLP 266
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + + L + LK + + + AKVP+++F
Sbjct: 267 GSDIDMVIVSEHGGYESRNSLYSLSSFLKRKNLAKNVEVIAKAKVPIIKFT-------ES 319
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ +H+ + S++ +G+ A K I + + + ++ +K
Sbjct: 320 TSNIHI-------------------DVSFERTNGIDAAKTIRSWITETPGLREIVLIVKQ 360
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGS---------LNTLVANFFKTYAY- 323
+ R + N+H G LGG + LV HP+ S L L+ FF+ Y
Sbjct: 361 FLSSRKL-NNVHVGGLGGYSIICLVYSFLILHPRLSTGNISPYENLGVLLIEFFELYGKN 419
Query: 324 WPWPTPVMLQDP----MLPAAGYPS-ETRS--LMPIRLPCSPHEYCHSNITRSTF 371
+ + + +P L YP + RS + I+ P P +NI+R +F
Sbjct: 420 FGYDNVAICVEPDNVCYLNKKYYPDLQGRSSFALSIQDPSDP----SNNISRGSF 470
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 293 HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVML 332
+LA+LVA VCQ +P + LV+ FF+ Y W WP PVML
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVML 40
>gi|347441079|emb|CCD34000.1| similar to zinc finger protein [Botryotinia fuckeliana]
Length = 1243
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EER LS +GL+P+ E +++RR ++ KL+++ + + P I
Sbjct: 266 EEERKLSTDMRELYDGLLPTAETDERRRRLVSKLEDM---------FNKEWPGHDI---- 312
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + SD+D +C+ ++ M V + L ++ + ++ CV AK
Sbjct: 313 -RVYVFGSSGNLLCTDASDVD-ICITTDWKVME---GVCMIAELLAKNGMQKVICVSTAK 367
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FD L L D++ + ++L R K +++
Sbjct: 368 VPIVKI-FDPELK----------------------LLCDMNVNNTQALENTRMIKTYIEI 404
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFL 289
P + +P+ IK W K R + + G L
Sbjct: 405 DP---RVRPLAMIIKHWTKSRAINDAVGGTL 432
>gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
Length = 1007
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 121/313 (38%), Gaps = 52/313 (16%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
ATI GS H +DID + P A D + + K+ + + A+
Sbjct: 681 ATIHLVGSRRTATHLPAADIDLVAAVPG----APDIGALERRVAKALGAGHRVRQLVAAR 736
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLR-DLDETSWKSLSGVRANKCILQ 257
VP +R + DL VL+ ++ + R +L ET SLS V + ++
Sbjct: 737 VPGLRIVTPRLSADL------VLAPTGDIPPADAVARRAELGETIASSLSAVSDAEALIA 790
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
L P P +R K WA+ RG+ G L G+ A++ A C++ + +F
Sbjct: 791 LRP-----GPHVRVAKAWARARGLDAAPLGGLPGLAWALMAAR-CRD---------LTDF 835
Query: 318 FKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTFYKIRTE 377
F+T+A W QD PI P +P ++T S I E
Sbjct: 836 FETWAAHSW------QD----------------PIPTPTAPIRDLTLHLTASMRDLITEE 873
Query: 378 FLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRS 437
G T P L P P +++ R+ + L A + G V+ R RS
Sbjct: 874 LYNGWETVTSTPDPLP---TLLAPPPMHRRHRRWAVITLRADGIEARDVLEGRVRGRTRS 930
Query: 438 LILKLEEVQGLCD 450
L+ L+E G+ D
Sbjct: 931 LLSALDEA-GVTD 942
>gi|119479751|ref|XP_001259904.1| PAP/25A associated domain family [Neosartorya fischeri NRRL 181]
gi|119408058|gb|EAW18007.1| PAP/25A associated domain family [Neosartorya fischeri NRRL 181]
Length = 1008
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 49/217 (22%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ +EE+ L+ L + L+PS E +D+RR +++KL+++ + + P I
Sbjct: 29 EAEEEKRLTKDMLEVYDRLLPSAESDDRRRQLVRKLEKL---------FNDQWPGHDIK- 78
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ +GS G + S+SD+D +C+ T E V L + ++ + + CV
Sbjct: 79 ----VHVFGSSGNKLCSSDSDVD-ICI---TTTYKELEHVCLLAEVLAKHGMERVVCVSH 130
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
AKVP+++ +D +L AC D++ + +L R + +
Sbjct: 131 AKVPIVKI-WD---PELRLAC-------------------DMNVNNTLALENTRMVRTYV 167
Query: 257 QLVPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
++ E+ +P+ IK W KRR G+ G L +
Sbjct: 168 EID---ERVRPLAMIIKYWTKRRILNDAGLGGTLSSY 201
>gi|325181595|emb|CCA16045.1| Poly(A) RNA polymerase putative [Albugo laibachii Nc14]
gi|325191995|emb|CCA26462.1| Poly(A) RNA polymerase putative [Albugo laibachii Nc14]
Length = 494
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 50/225 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ P EE R N+I ++K +V W R A + T+GS+ +
Sbjct: 137 ISPHDEELQARENLIAQMKNLVSNL-----WPR-----------AAVETFGSHETQMFLP 180
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF--KFDGILID 212
+SDID + G A ++ VL L++R VS + + A++P+++F K I +D
Sbjct: 181 QSDIDLVIFG---APTGKESLFVLAAELEARDMVSYLEVIDKARIPIVKFVDKNSAIQVD 237
Query: 213 LPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
+ S+ SG+ I Q + F+P++ +
Sbjct: 238 I----------------------------SFNISSGLATADLIKQYMRIFPSFRPLVLVL 269
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANF 317
K + +R + G +G L ++V Q + + L TL +F
Sbjct: 270 KYFLAQRELNETFQGGIGSFLLQLMVVSFLQQYRR-QLGTLYDDF 313
>gi|365758533|gb|EHN00370.1| Pap2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 514
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E A ++ P A + +GSY ++
Sbjct: 192 ISPSREEIEIRNQTISTIRE---------ALKQLWPD-------ADLHVFGSYSTDLYLP 235
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK +EI V A+VP+++F P
Sbjct: 236 GSDIDCVVNSELGGKESRNNLYSLASHLKKNNLATEIEVVAKARVPIIKFV-------EP 288
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 289 HSRIHI-------------------DVSFERTNGLEAAKLIREWLNDTPGLRELVLIVKQ 329
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHP---------KGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV HP K +L L+ FF+ Y
Sbjct: 330 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITKEIDSKDNLGVLLIEFFELYGKN 388
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 389 FGYDDVALG----SSDGYPIYFPKSSWSAIQPIKNPFSLAIQDPGDES-NNISRGSF 440
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 250 RANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHV 301
R + + +PD F+ R IK WAK RG+Y GFL G+ ++IL+A V
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARV 688
>gi|448101749|ref|XP_004199636.1| Piso0_002176 [Millerozyma farinosa CBS 7064]
gi|359381058|emb|CCE81517.1| Piso0_002176 [Millerozyma farinosa CBS 7064]
Length = 646
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 62/295 (21%)
Query: 95 LVPSTEEEDKRRNVIQKLK-EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
+ PS EE R V++ LK EI W ETH +GS ++
Sbjct: 199 ISPSKEEILTRNRVVKDLKREINSLWPD-------------TETHV----FGSSATDLYL 241
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
SDID + L + L++R +I + AKVP+++F +D
Sbjct: 242 PGSDIDMVVTSKTGDYENRSKLYQLSSYLRNRKLAKDIEVIAKAKVPIIKF------VD- 294
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
P + +H+ + S++ +G+ A K I + + + ++ IK
Sbjct: 295 PSSNIHI-------------------DISFERRNGIEAAKRIRKWLDKTPGLRELVLIIK 335
Query: 274 LWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGSLN---------TLVANFFKTYAY 323
+ + R + N+H G LGG IL H + HP+ S N +L+ FF+ Y
Sbjct: 336 QFLRSRRL-NNVHVGGLGGYSTIILCYHFLRLHPRISTNNMSILDNLGSLLIEFFELYGR 394
Query: 324 -WPWPTPVMLQDPM------LPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTF 371
+ + ++ DP LP + S P + +NI+RS++
Sbjct: 395 NFSYDNLIIAIDPETDEPKYLPKKDHAYLNSSKNPFSIVIQDPADSTNNISRSSY 449
>gi|255730627|ref|XP_002550238.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132195|gb|EER31753.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 603
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
T+ +GS ++ SDID + + + L L++ +E+ + AK
Sbjct: 206 TTVHVFGSCATDLYLPGSDIDMVVVSDTGSYENASRLYQLSTFLRTNKLATEVEVIAHAK 265
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++F +D P + LH+ + S++ +G+ A K I +
Sbjct: 266 VPIIKF------VD-PKSRLHI-------------------DVSFERTNGIDAAKRIRRW 299
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPK---------G 308
+ + ++ +K + + R + N+H G LGG I+ H + HPK
Sbjct: 300 LVSTPGLRELVLVVKQFLRTRRL-NNVHVGGLGGYATIIMCYHFLRLHPKITTDAMSALD 358
Query: 309 SLNTLVANFFKTYAY-WPWPTPVMLQDPMLPAAGYPSETRS----------LMPIRLPCS 357
+L L+ FF+ Y + + V+ DP Y +++S + I+ P
Sbjct: 359 NLGVLLIEFFELYGRNFSYDDLVLALDPENEEPKYVRKSKSPLQHSARSSFAIIIQDPAD 418
Query: 358 PHEYCHSNITRSTF 371
P +NITRS++
Sbjct: 419 P----SNNITRSSY 428
>gi|366997671|ref|XP_003683572.1| hypothetical protein TPHA_0A00530 [Tetrapisispora phaffii CBS 4417]
gi|357521867|emb|CCE61138.1| hypothetical protein TPHA_0A00530 [Tetrapisispora phaffii CBS 4417]
Length = 678
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 118/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE R +I +K+ V R W + A +L +GSY ++
Sbjct: 187 ISPSREEIKLRNRIIAAIKQAV-----RDLW-----------SDADLLVFGSYATDLYLP 230
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + +L + L+ +++ + A+VP+++F P
Sbjct: 231 GSDIDCVINSEKGDKESRYNLYILASHLRQLNLATQVEVIAKARVPIIKFV-------EP 283
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ +H+ + S++ +GV A K I + + D + ++ IK
Sbjct: 284 KSQIHI-------------------DVSFERTNGVEAAKLIREWLDDTPGLRELVLVIKQ 324
Query: 275 W-AKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPK---------GSLNTLVANFF----K 319
+ A RR N+H G LGG + LV + HPK +L L+ FF K
Sbjct: 325 FLATRR--LNNVHTGGLGGFSIICLVFCFLKMHPKIITNAINELDNLGVLLIEFFELYGK 382
Query: 320 TYAYWPWPTPVML-QDPMLPAAGY----PSETRSLMPIRLPCSPHEYCHSNITRSTF 371
+AY V + LP + PS T + I+ P +NI+R +F
Sbjct: 383 NFAYDDVAISVTDGRASYLPKTDFKQLNPSRTSFSLAIQDPND----AMNNISRGSF 435
>gi|401837753|gb|EJT41641.1| PAP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 592
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I ++E A ++ P A + +GSY ++
Sbjct: 192 ISPSREEIEIRNQTISTIRE---------ALKQLWPD-------ADLHVFGSYSTDLYLP 235
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + + L + LK +EI V A+VP+++F P
Sbjct: 236 GSDIDCVVNSELGGKESRNNLYSLASHLKKNNLATEIEVVAKARVPIIKFV-------EP 288
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
++ +H+ + S++ +G+ A K I + + D + ++ +K
Sbjct: 289 HSRIHI-------------------DVSFERTNGLEAAKLIREWLNDTPGLRELVLIVKQ 329
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHP---------KGSLNTLVANFFKTYAYW 324
+ R + N+H G LGG + LV HP K +L L+ FF+ Y
Sbjct: 330 FLHARRL-NNVHTGGLGGFSIICLVFSFLHMHPRIITKEIDSKDNLGVLLIEFFELYGKN 388
Query: 325 PWPTPVMLQDPMLPAAGYP-----SETRSLMPIRLPCS-----PHEYCHSNITRSTF 371
V L + GYP S ++ PI+ P S P + +NI+R +F
Sbjct: 389 FGYDDVALG----SSDGYPIYFPKSSWSAIQPIKNPFSLAIQDPGDES-NNISRGSF 440
>gi|351701159|gb|EHB04078.1| Poly(A) polymerase alpha [Heterocephalus glaber]
Length = 298
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 92 NEGLVP----STEEEDKRRNVI-QKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGS 146
NE L P EEE +RR +I KL +V W++ ++ + LP+ I + T+GS
Sbjct: 88 NETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKMFTFGS 147
Query: 147 YGLGVHGSESD 157
Y LGVH E +
Sbjct: 148 YRLGVHTKEKE 158
>gi|212530714|ref|XP_002145514.1| PAP/25A associated domain family [Talaromyces marneffei ATCC 18224]
gi|210074912|gb|EEA28999.1| PAP/25A associated domain family [Talaromyces marneffei ATCC 18224]
Length = 1059
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
+EE LS E L+PS E +++RR ++QKL+++ EQ +
Sbjct: 113 EEEEKLSAEMQDLYEQLLPSAESDERRRQLVQKLEKLF--------------NEQWPGNN 158
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + S+SD+D +C+ F + V L + ++ + + CV A+
Sbjct: 159 IDVHVFGSSGNKLCTSDSDVD-ICITTSFKQLEN---VCLLAEVLAQHGMERVVCVSHAR 214
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D L AC +++V N L + + I
Sbjct: 215 VPIVKI-WD---PQLKMAC--------DMNVNNTLALEN--------------TRMIRTY 248
Query: 259 VPDLEKFQPVLRCIKLWAKRR 279
V E+ +P+ IK W KRR
Sbjct: 249 VDIDERVRPLAMIIKHWTKRR 269
>gi|121713318|ref|XP_001274270.1| PAP/25A associated domain family [Aspergillus clavatus NRRL 1]
gi|119402423|gb|EAW12844.1| PAP/25A associated domain family [Aspergillus clavatus NRRL 1]
Length = 1084
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 54/221 (24%)
Query: 75 LDQMDEERSLSLVQLMTN--EGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKE 132
LD DE+R L Q M + + L+PS E +D+RR +++KL+++ + + P
Sbjct: 109 LDSEDEKR---LTQDMLDIYDRLLPSAESDDRRRQLVRKLEKL---------FNDQWPGR 156
Query: 133 QIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIH 192
I + +GS G + S+SD+D +C+ T E V L + ++ + +
Sbjct: 157 DI-----KVHVFGSSGNKLCSSDSDVD-ICI---TTTYKELEHVCLLAEVLAKHGMERVV 207
Query: 193 CVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRAN 252
CV AKVP+++ +D +L AC D++ + +L R
Sbjct: 208 CVSHAKVPIVKI-WD---PELRLAC-------------------DMNVNNTLALENTRMV 244
Query: 253 KCILQLVPDLEKFQPVLRCIKLWAKRR-----GVYGNLHGF 288
+ +++ ++ +P+ IK W KRR G+ G L +
Sbjct: 245 RTYVEID---DRVRPLAMIIKYWTKRRILNDAGLGGTLSSY 282
>gi|339240191|ref|XP_003376021.1| putative nucleotidyltransferase domain protein [Trichinella
spiralis]
gi|316975286|gb|EFV58734.1| putative nucleotidyltransferase domain protein [Trichinella
spiralis]
Length = 489
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 37/310 (11%)
Query: 8 NNQSNNLVVYPYNFVDFYPQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFN 67
N+ NN V P + F+ N ++ V + + P+ + LV C LV F
Sbjct: 69 NDSYNNNAVAPPSRKRFHGSNDSYDRVFAKKM---KPDDVENDMALVKCVVKSELVDCFM 125
Query: 68 FPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKR-RNVIQKLKEIVL--AWVKRVA 124
+ + L T+ ++ T E DK + +++++ L A +RV
Sbjct: 126 LESSKKCNRNANNSNVHKLAD--TSVEVIDLTSELDKSWLPLDEQIQQFFLLNAEPERVT 183
Query: 125 WQRRLPKEQIAE------THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVL 178
Q+ +Q+A A + +GS + SDID LC+ + + F L
Sbjct: 184 QQKVAAVKQLANYVKEYNRKAKVYMFGSTLSKIASRNSDID-LCIIDD-----KKLFSSL 237
Query: 179 HNMLKSRPEVSEIHCVKDAKVPLMRFK--FDGILIDLPYACLHVL--SVPENVDVLN-PF 233
+ E H K++K L R+K FD + + P +++ +VP + P+
Sbjct: 238 N---------VEFH-RKESKRRLHRYKSKFDNLHLACPLNAFNIINATVPIMISKFKEPY 287
Query: 234 FLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVH 293
R + S SLSG+R++ I E+F + IK WA ++ G +G++GG
Sbjct: 288 SFRA--DISMNSLSGIRSSLLIRHYATADERFAKLAVLIKCWANKKFPGGAKNGYIGGFA 345
Query: 294 LAILVAHVCQ 303
+L+ + Q
Sbjct: 346 WTLLLLNYMQ 355
>gi|343172004|gb|AEL98706.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
Length = 501
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 53/237 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
L P+ EE R + IQ++ +++ + W + + +GSY G++
Sbjct: 134 LSPTPEEGRSRNSAIQRVSDVI-----KYIW-----------PNCRVEVFGSYRTGLYLP 177
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF--KFDGILID 212
SDID + L + + L L + +I + A+VP+++F K + D
Sbjct: 178 SSDIDVVILDSNIKS-PQIGLQALSRALSQKGIAKKIQVIGKARVPIIKFVEKVTDVQFD 236
Query: 213 LPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
+ + D+D +G +A + I ++ L +P+ +
Sbjct: 237 VSF---------------------DVD-------NGPKAAEYIKDVISRLPPLRPLCLIL 268
Query: 273 KLWAKRRGVYGNLHGFLGG-VHLAILVAHV-----CQNHPKGSLNTLVANFFKTYAY 323
K++ ++R + G +G LA+L+A + Q +P+ +L L+ FF+ YA+
Sbjct: 269 KVFLQQRELNEVYSGGIGSYALLAMLIAMLKSVNEGQRYPEHNLGVLLVKFFEFYAH 325
>gi|343172002|gb|AEL98705.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
Length = 501
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 53/237 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
L P+ EE R + IQ++ +++ + W + + +GSY G++
Sbjct: 134 LSPTPEEGRSRNSAIQRVSDVI-----KYIW-----------PNCRVEVFGSYRTGLYLP 177
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF--KFDGILID 212
SDID + L + + L L + +I + A+VP+++F K + D
Sbjct: 178 SSDIDVVILDSNIKS-PQIGLQALSRALSQKGIAKKIQVIGKARVPIIKFVEKVTDVQFD 236
Query: 213 LPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
+ + D+D +G +A + I ++ L +P+ +
Sbjct: 237 VSF---------------------DVD-------NGPKAAEYIQDVISRLPPLRPLCLIL 268
Query: 273 KLWAKRRGVYGNLHGFLGG-VHLAILVAHV-----CQNHPKGSLNTLVANFFKTYAY 323
K++ ++R + G +G LA+L+A + Q +P+ +L L+ FF+ YA+
Sbjct: 269 KVFLQQRELNEVYSGGIGSYALLAMLIAMLKSVNEGQRYPEHNLGVLLVKFFEFYAH 325
>gi|440631915|gb|ELR01834.1| hypothetical protein GMDG_00933 [Geomyces destructans 20631-21]
Length = 1241
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 44/201 (21%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
DE++ L+ L+P+ E E KR+ +QKL+ ++ W P I
Sbjct: 269 DEDKKLTADMEKLYAELLPTDESEAKRQRFVQKLEHLL-----NTEW----PGHDIK--- 316
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + ESD+D +C+ E+ + + +L ++L R +++++CV AK
Sbjct: 317 --VHVFGSSGNLLCTDESDVD-ICITTEWKEL--ERVCMLADLLY-RNGMTKVNCVSTAK 370
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R K +Q+
Sbjct: 371 VPIVKI-WD---PELGLAC-------------------DMNVNNTLALENTRMIKTYVQV 407
Query: 259 VPDLEKFQPVLRCIKLWAKRR 279
P + +P+ IK W KRR
Sbjct: 408 DP---RVRPLAMIIKHWTKRR 425
>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 153
Score = 44.3 bits (103), Expect = 0.18, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 36/52 (69%)
Query: 178 LHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDV 229
+ LK + EV ++ V++A VP+++ FDGI ID+ +A L + ++PE++D+
Sbjct: 2 FYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDL 53
>gi|320590369|gb|EFX02812.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 529
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 47 ISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRR 106
IS LVP P L+ + + LD R+L +++ M PS EE ++RR
Sbjct: 408 ISNEVKLVPVQVPAGLLA------DATALD-----RALVVLEAM------PSDEEVEQRR 450
Query: 107 NVIQKLKEIVLA-----WVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDAL 161
+ L+ I++A + + RLP++ + ++ GSYGLGV S++D L
Sbjct: 451 EALALLQRILMAEKSNGGAESASSPPRLPRQLV------VVPVGSYGLGVWTLTSEMDCL 504
Query: 162 CLGPEFATMAEDFFVVLHNMLKS 184
C+G AT FF + L++
Sbjct: 505 CIGVYAATT---FFAIATQRLRA 524
>gi|150951520|ref|XP_001387852.2| topoisomerase I-related protein [Scheffersomyces stipitis CBS 6054]
gi|149388662|gb|EAZ63829.2| topoisomerase I-related protein [Scheffersomyces stipitis CBS 6054]
Length = 605
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 60/294 (20%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS+EE R +I KLK + ++ W P+ ETH +GS ++
Sbjct: 189 ISPSSEEIRTRNRLINKLKSSISSY-----W----PE---TETHV----FGSSATDLYLP 232
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + L + L+ + + + AKVP+++F +D P
Sbjct: 233 GSDIDIVIVSRTGDYENRSRLYQLSSYLRHKGLAKNMEVIAKAKVPIIKF------VD-P 285
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ + N+DV S++ +G+ A K I + + + ++ IK
Sbjct: 286 ESNV-------NIDV------------SFERRNGIEAAKKIRRWMTTTPGLRELVLIIKQ 326
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGSLNT---------LVANFFKTYAY- 323
+ R + N+H G LGG IL H HP+ S N+ L+ FF+ Y
Sbjct: 327 FLSSRRL-NNVHSGGLGGYATIILCYHFLMMHPRVSTNSINITDNLGALLIEFFELYGRN 385
Query: 324 WPWPTPVMLQDPM------LPAAGYPSETRSLMPIRLPCSPHEYCHSNITRSTF 371
+ + ++ DP L YP + P + +NITRS++
Sbjct: 386 FSYDNLIISLDPRSDLPRYLLKRDYPHLNTNKNPFTIVVQDPSDEDNNITRSSY 439
>gi|149244754|ref|XP_001526920.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449314|gb|EDK43570.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 664
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 70/299 (23%)
Query: 95 LVPSTEEEDKRRNVIQKLK-EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
+ PS+EE R V+ LK +I L W E H +GS ++
Sbjct: 234 ISPSSEEIVIRNKVVNTLKTQIALFWPG-------------TEAHV----FGSSATDLYL 276
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
SDID + L L + LK++ + + + AKVP+++F +D
Sbjct: 277 PGSDIDMVVLSDTGDYENRSRLYQLSSFLKAKKLATNVEVIASAKVPIIKF------VD- 329
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
P + +HV + S++ +G+ A + I + + + ++ +K
Sbjct: 330 PDSNIHV-------------------DISFERKNGLDAARRIRRWLASTPGLRELVLVVK 370
Query: 274 LWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGS---------LNTLVANFFKTYAY 323
+ + R + N+H G LGG I+ H + HPK S L L+ FF+ Y
Sbjct: 371 QFLRSRKL-NNVHVGGLGGYATIIICYHFLRLHPKLSTESMSSLDNLGVLLIEFFELYGR 429
Query: 324 -WPWPTPVMLQDPM------LPAAGYP--SETRSLMPI--RLPCSPHEYCHSNITRSTF 371
+ + ++ DP LP Y + R+ I + P P ++NITRS++
Sbjct: 430 NFSYDNLIISLDPKTEEPRYLPKGRYSVLNTARNTFAIVVQDPADP----NNNITRSSY 484
>gi|255949412|ref|XP_002565473.1| Pc22g15560 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592490|emb|CAP98844.1| Pc22g15560 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1063
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 44/201 (21%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
DEE+ LS + + L+PS E +D+RR +++KL+++ + + P I
Sbjct: 115 DEEKKLSTEIMDLYDRLLPSAESDDRRRQLVRKLEKL---------FNDQWPGHNIK--- 162
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A I +GS G + S+SD+D +C+ + + V L + ++ + + CV AK
Sbjct: 163 ANI--FGSSGNKLCSSDSDVD-ICITTNYKELE---HVCLLAEVLAKHGMQRVVCVSHAK 216
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC +++V N L + + I
Sbjct: 217 VPIVKI-WD---PELRLAC--------DMNVNNTLALENT--------------RMIRTY 250
Query: 259 VPDLEKFQPVLRCIKLWAKRR 279
V E+ +P+ IK W K+R
Sbjct: 251 VEVDERVRPLAMAIKHWTKQR 271
>gi|330841067|ref|XP_003292526.1| hypothetical protein DICPUDRAFT_157248 [Dictyostelium purpureum]
gi|325077222|gb|EGC30949.1| hypothetical protein DICPUDRAFT_157248 [Dictyostelium purpureum]
Length = 532
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 49/257 (19%)
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
K+Q++ + YGSY +G+ +SDID L D + + LKS P
Sbjct: 302 KKQLSNKKLS--KYGSYVIGLSSPDSDIDVALLN------GADIYDKVLQKLKSNPSYEI 353
Query: 191 IHCVKDAKVPLMRF--KFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSG 248
+ DAK+P++RF K + + DL S+K +
Sbjct: 354 LEIRPDAKIPIIRFSDKINLVKFDL----------------------------SFKIGNS 385
Query: 249 VRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKG 308
+++ + ++ E + ++ +K + ++ + G+ L I+ + + K
Sbjct: 386 HPSSEFFISILKGKENLKSLILLVKHYTEKANIKDASQGYFSSHALTIMAIYFYKTLVKS 445
Query: 309 SLNT--LVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSL---MPIRLPCSPHEYCH 363
+LN L+ +FF Y + + + + + + RS + I+ +
Sbjct: 446 NLNIYDLLHSFFLFYIKFDYNKIISINKKEIESF------RSFGTKIKIKDVIDKNRNVA 499
Query: 364 SNITRSTFYKIRTEFLR 380
S I S F KI EF R
Sbjct: 500 SGIKLSNFKKIMVEFSR 516
>gi|254573058|ref|XP_002493638.1| Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p)
[Komagataella pastoris GS115]
gi|238033437|emb|CAY71459.1| Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p)
[Komagataella pastoris GS115]
gi|328354535|emb|CCA40932.1| DNA polymerase sigma subunit [Komagataella pastoris CBS 7435]
Length = 601
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 35/189 (18%)
Query: 144 YGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMR 203
+GS+ ++ SDID + A+ + L + L+S+ I + AKVP+++
Sbjct: 180 FGSFATDLYLPGSDIDMVITSDSGKYCAKSYLYQLSSFLRSKNLGVNIETIARAKVPIIK 239
Query: 204 FKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLE 263
F I+ P + +H+ + S++ +G+RA + I + +
Sbjct: 240 F------IE-PRSKIHI-------------------DVSFEKTNGLRAAERIQGWLRETP 273
Query: 264 KFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK---------GSLNTLV 314
+ ++ +K + R + HG LGG + LV HP+ +L L+
Sbjct: 274 GLRELVLIVKQFLAVRRMNNVHHGGLGGFSIICLVHSFLSLHPRLITNSIDPLDNLGVLL 333
Query: 315 ANFFKTYAY 323
FF+ Y Y
Sbjct: 334 IEFFELYGY 342
>gi|378730228|gb|EHY56687.1| poly(A) polymerase, variant [Exophiala dermatitidis NIH/UT8656]
gi|378730229|gb|EHY56688.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 1091
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 46/203 (22%)
Query: 77 QMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAE 136
+ DE+ + + +L E L P+ E E +R I KL +I+ + R P I
Sbjct: 142 EEDEKLTADMQKLY--ETLQPTAESEQRRSQFINKLDKIL---------RERWPTSAI-- 188
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ +GS G + S+SD+D +C+ + M + + ++L ++ + + CV
Sbjct: 189 ---NVNVFGSTGNNLGTSDSDVD-VCITTDCKEM--EHVCSIADLL-AKHGMERVVCVSS 241
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
AKVP+++ +D +L AC +++V NP L + + +
Sbjct: 242 AKVPIVKI-WD---PELQVAC--------DINVNNPLALENTE--------------LVR 275
Query: 257 QLVPDLEKFQPVLRCIKLWAKRR 279
V + +P+ IK WAKRR
Sbjct: 276 TYVSIDSRVRPLAMIIKYWAKRR 298
>gi|241948905|ref|XP_002417175.1| topoisomerase 1-related protein TRF4, putative [Candida
dubliniensis CD36]
gi|223640513|emb|CAX44767.1| topoisomerase 1-related protein TRF4, putative [Candida
dubliniensis CD36]
Length = 606
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 46/223 (20%)
Query: 95 LVPSTEEEDKRRNVIQKLK-EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
+ PS+EE R NVI LK EI + W ETH +GS ++
Sbjct: 183 ISPSSEEIVTRNNVISTLKTEIGMFWPG-------------TETHV----FGSCATDLYL 225
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
SDID + + L L+++ + + AKVP+++F +D
Sbjct: 226 PGSDIDMVVVSETGDYENRSRLYQLSTFLRTKKLAKNVEVIASAKVPIIKF------VD- 278
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
P + LH+ + S++ +G+ A K I + + + ++ IK
Sbjct: 279 PISELHI-------------------DVSFERTNGLDAAKRIRRWLISTPGLRELVLVIK 319
Query: 274 LWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
+ + R + N+H G LGG I+ H + HPK S +++ A
Sbjct: 320 QFLRSRRL-NNVHVGGLGGYATIIMCYHFLRLHPKLSTSSMDA 361
>gi|425774063|gb|EKV12382.1| hypothetical protein PDIP_52500 [Penicillium digitatum Pd1]
gi|425776189|gb|EKV14418.1| hypothetical protein PDIG_32940 [Penicillium digitatum PHI26]
Length = 1091
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 44/202 (21%)
Query: 78 MDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAET 137
DEE+ LS + + L+PS E +D+RR +++KL+++ + + P I
Sbjct: 141 QDEEKKLSTEIMDLYDRLLPSAESDDRRRQLVRKLEKL---------FNDQWPGHDIK-- 189
Query: 138 HATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDA 197
A I +GS G + S+SD+D +C+ + + V L + ++ + + CV A
Sbjct: 190 -ANI--FGSSGNKLCSSDSDVD-ICITTNYKELE---HVCLLAEVLAKYGMQRVVCVSHA 242
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
KVP+++ +D +L AC +++V N L + + I
Sbjct: 243 KVPIVKI-WD---PELRLAC--------DMNVNNTLALENT--------------RMIRT 276
Query: 258 LVPDLEKFQPVLRCIKLWAKRR 279
V E+ +P+ IK W K+R
Sbjct: 277 YVEVDERVRPLAMAIKHWTKQR 298
>gi|147782453|emb|CAN77386.1| hypothetical protein VITISV_006352 [Vitis vinifera]
Length = 720
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 49/214 (22%)
Query: 93 EGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVH 152
E L+P EE+ K++ ++ L+++V + PK Q+ YGS
Sbjct: 407 ESLIPEEEEKAKQKQLLTLLEKLV---------SKEWPKAQL-------FLYGSCANSFG 450
Query: 153 GSESDIDALCLGPEFATMAE-DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK--FDGI 209
S+SDID +CL + A + + +F + L ++L+S + + + A+VP+++ K GI
Sbjct: 451 VSKSDID-VCLAIDDADINKSEFLLKLADILQS-DNLQNVQALTRARVPIVKLKDPVTGI 508
Query: 210 LIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVL 269
D+ C++ + + V+N LRD + VR +
Sbjct: 509 SCDI---CINNV-----LAVVNTKLLRDYAQID------VRLRQLAF------------- 541
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
+K WAK RGV G L ++ H Q
Sbjct: 542 -IVKHWAKSRGVNETYQGTLSSYAYVLMCIHFLQ 574
>gi|296089114|emb|CBI38817.3| unnamed protein product [Vitis vinifera]
Length = 989
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 49/215 (22%)
Query: 93 EGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVH 152
E L+P EE+ K++ ++ L+++V + PK Q+ YGS
Sbjct: 222 ESLIPEEEEKAKQKQLLTLLEKLV---------SKEWPKAQL-------FLYGSCANSFG 265
Query: 153 GSESDIDALCLGPEFATM-AEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK--FDGI 209
S+SDID +CL + A + +F + L ++L+S + + + A+VP+++ K GI
Sbjct: 266 VSKSDID-VCLAIDDADINKSEFLLKLADILQS-DNLQNVQALTRARVPIVKLKDPVTGI 323
Query: 210 LIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVL 269
D+ C++ + + V+N LRD + + + +
Sbjct: 324 SCDI---CINNV-----LAVVNTKLLRDYAQIDVR--------------------LRQLA 355
Query: 270 RCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQN 304
+K WAK RGV G L ++ H Q
Sbjct: 356 FIVKHWAKSRGVNETYQGTLSSYAYVLMCIHFLQQ 390
>gi|156058866|ref|XP_001595356.1| hypothetical protein SS1G_03445 [Sclerotinia sclerotiorum 1980]
gi|154701232|gb|EDO00971.1| hypothetical protein SS1G_03445 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1017
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 44/201 (21%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
DEE+ LS + L+P+ E +++RR ++ KL+++ + + P I
Sbjct: 37 DEEKKLSTDMRELYDRLLPTAETDERRRKLVLKLEDM---------FNKEWPGHDIR--- 84
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + ESD+D +C+ ++ M V + L ++ + ++ CV AK
Sbjct: 85 --VHVFGSSGNLLCTDESDVD-ICITTDWKAME---GVCMIAELLAKNGMQKVICVSTAK 138
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ FD DL C D++ + +L R K +++
Sbjct: 139 VPIVKI-FD---PDLKLFC-------------------DMNVNNTLALENTRMIKTYIEI 175
Query: 259 VPDLEKFQPVLRCIKLWAKRR 279
P + +P+ IK W K R
Sbjct: 176 DP---RVRPLAMIIKHWTKSR 193
>gi|449310610|gb|AGE92532.1| topoisomerase-related protein [Leishmania braziliensis]
Length = 893
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 37/140 (26%)
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
KVPL++F G LID VD+ S ++ G R ++CI+Q
Sbjct: 488 KVPLIKFVHKGSLID--------------VDI------------SVGAVDGKRNSECIVQ 521
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP----------K 307
+ + P++ +K + +RG++ HG LG +LV + HP
Sbjct: 522 YMNAYPEALPLILVVKYFVMQRGMHEPYHGGLGSYATTLLVVAFLRQHPIYTTQPEQRAM 581
Query: 308 GSLNTLVANFFKTYA-YWPW 326
L L+ +FF+ YW +
Sbjct: 582 TGLGKLLVDFFRMCGQYWNY 601
>gi|448097882|ref|XP_004198786.1| Piso0_002176 [Millerozyma farinosa CBS 7064]
gi|359380208|emb|CCE82449.1| Piso0_002176 [Millerozyma farinosa CBS 7064]
Length = 650
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 64/296 (21%)
Query: 95 LVPSTEEEDKRRNVIQKLK-EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
+ PS EE R V++ LK EI W +T A + +GS ++
Sbjct: 200 ISPSKEEILTRNRVVKDLKREINNLW---------------PDTEAHV--FGSSATDLYL 242
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
SDID + L + L++R +I + AKVP+++F +D
Sbjct: 243 PGSDIDMVVTSNTGDYENRSKLYQLSSYLRNRKLAKDIEVIAKAKVPIVKF------VD- 295
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
P + +H+ + S++ +G+ A K I + + + ++ +K
Sbjct: 296 PSSNIHI-------------------DISFERRNGIEAAKRIRRWLDRTPGLRELVLIVK 336
Query: 274 LWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGSLN---------TLVANFFKTYAY 323
+ + R + N+H G LGG IL H + HP+ S N +L+ FF+ Y
Sbjct: 337 QFLRSRRL-NNVHVGGLGGYSTIILCYHFLRLHPRISTNNISILDNLGSLLIEFFELYGR 395
Query: 324 -WPWPTPVMLQDPMLPAAGY-PSETRS-LMPIRLPCS-----PHEYCHSNITRSTF 371
+ + ++ DP Y P + + L P + P S P + + NI+RS++
Sbjct: 396 NFSYDNLIIAIDPETDEVKYLPKKDHAYLNPSKNPFSIVIQDPADSTN-NISRSSY 450
>gi|154332398|ref|XP_001562573.1| topoisomerase-related function protein-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134059463|emb|CAM41689.1| topoisomerase-related function protein-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310632|gb|AGE92543.1| topoisomerase-related protein [Leishmania braziliensis]
Length = 892
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 37/140 (26%)
Query: 198 KVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQ 257
KVPL++F G LID VD+ S ++ G R ++CI+Q
Sbjct: 487 KVPLIKFVHKGSLID--------------VDI------------SVGAVDGKRNSECIVQ 520
Query: 258 LVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP----------K 307
+ + P++ +K + +RG++ HG LG +LV + HP
Sbjct: 521 YMNAYPEALPLILVVKYFVMQRGMHEPYHGGLGSYATTLLVVAFLRQHPIYTTQPEQRAM 580
Query: 308 GSLNTLVANFFKTYA-YWPW 326
L L+ +FF+ YW +
Sbjct: 581 TGLGKLLVDFFRMCGQYWNY 600
>gi|196004468|ref|XP_002112101.1| hypothetical protein TRIADDRAFT_23436 [Trichoplax adhaerens]
gi|190586000|gb|EDV26068.1| hypothetical protein TRIADDRAFT_23436 [Trichoplax adhaerens]
Length = 289
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 89/233 (38%), Gaps = 51/233 (21%)
Query: 97 PSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
P EE++ R V++ +KE++L W H + +GS+ G++ S
Sbjct: 23 PRPEEKNMRETVVEGVKEVILTL-----W-----------PHVQVEVFGSFRTGLYLPTS 66
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
DID + G + ED L M + I C+ +A VP+++
Sbjct: 67 DIDLVIFGIDGKGAFEDLEKAL--MQHEVCDRDNIKCIHNAMVPIIKLT--------EKT 116
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
C + + + N++ + V++ I + E + ++ +K +
Sbjct: 117 CNYKMDIEFNIE------------------NSVKSADIIQTYIRKYEPLKYLVLVLKQFL 158
Query: 277 KRRGVYGNLHGFLGGVHLAILVAHVCQ-------NHPKGSLNTLVANFFKTYA 322
+R + G + L ++V + Q +HP+ + L+ FF+ Y
Sbjct: 159 FQRELNEVFSGGVSSYTLVMMVVNFLQLHPRRYTDHPEANYGVLLIEFFELYG 211
>gi|70998266|ref|XP_753857.1| PAP/25A associated domain family [Aspergillus fumigatus Af293]
gi|66851493|gb|EAL91819.1| PAP/25A associated domain family [Aspergillus fumigatus Af293]
gi|159126407|gb|EDP51523.1| PAP/25A associated domain family [Aspergillus fumigatus A1163]
Length = 1063
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 60/230 (26%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
L+PS E +D+RR +++KL+++ + + P I + +GS G + S
Sbjct: 155 LLPSAESDDRRRQLVRKLEKL---------FNDQWPGHDI-----KVHVFGSSGNKLCSS 200
Query: 155 ESD-IDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
+SD ++ +CL +AE + H M + + CV AKVP+++ +D +L
Sbjct: 201 DSDELEHVCL------LAE--VLAKHGMER-------VVCVSHAKVPIVKI-WD---PEL 241
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
AC D++ + +L R + +++ E+ +P+ IK
Sbjct: 242 RLAC-------------------DMNVNNTLALENTRMVRTYVEID---ERVRPLAMIIK 279
Query: 274 LWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAY 323
W KRR + + F L+ LV + +N K +L L+ FF+ Y +
Sbjct: 280 YWTKRRILNDAVCSF--DDDLSSLVGYGRKN--KQTLGELLFQFFRYYGH 325
>gi|366992111|ref|XP_003675821.1| hypothetical protein NCAS_0C04670 [Naumovozyma castellii CBS 4309]
gi|342301686|emb|CCC69457.1| hypothetical protein NCAS_0C04670 [Naumovozyma castellii CBS 4309]
Length = 586
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 53/238 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I K++ V + W A + +GSY ++
Sbjct: 188 ISPSREEIESRNQTISKVRNAV-----KQLW-----------PDADLHVFGSYATDLYLP 231
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + L + LK + ++I + +VP+++F P
Sbjct: 232 GSDIDCVINSKAGDKENRNSLYSLASFLKQQGLATQIEVIAKTRVPIIKFV-------EP 284
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ +H+ + S++ +G+ A K I + + D + ++ IK
Sbjct: 285 ESNIHI-------------------DVSFERTNGLEAAKLIREWLQDTPGLRELVLIIKQ 325
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPK---------GSLNTLVANFFKTYA 322
+ R + N+H G LGG + +V Q HP+ +L L+ FF+ Y
Sbjct: 326 FLHSRRL-NNVHTGGLGGFSIICIVFSFLQMHPRIITNEIDPMENLGVLLIEFFELYG 382
>gi|83774636|dbj|BAE64759.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 720
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 97 PSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
PS EE +R+ + +KE+V +R A LP + ++ GSYG GV S S
Sbjct: 600 PSNEEITQRQEAFELIKELV---NRRDA---NLPAGTRLDLLFEVVPVGSYGFGVWNSSS 653
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLK--SRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
D+D L +G FF ++ L+ + +V + VK A ++ + G+ +DL
Sbjct: 654 DMDILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQ 710
Query: 215 YAC 217
Y
Sbjct: 711 YCA 713
>gi|344305107|gb|EGW35339.1| hypothetical protein SPAPADRAFT_48344 [Spathaspora passalidarum
NRRL Y-27907]
Length = 615
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 58/266 (21%)
Query: 131 KEQIAE----THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRP 186
K QIA+ T A + +GS ++ SDID + + L + L+S+
Sbjct: 213 KTQIAKFWPGTEAHV--FGSCATDLYLPGSDIDMVVISETGDYENRSRLYQLSSFLRSKK 270
Query: 187 EVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSL 246
+ + +AKVP+++F +D P + +H+ + S++
Sbjct: 271 LAKNVEVIANAKVPIIKF------VD-PESEIHI-------------------DVSFERT 304
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNH 305
+G+ A K I + + + ++ +K + + R + N+H G LGG I+ H + H
Sbjct: 305 NGIDAAKRIRKWLITTPGLRELVLIVKQFLRSRRL-NNVHVGGLGGYATIIMCYHFLRLH 363
Query: 306 PKGS---------LNTLVANFFKTYAY-WPWPTPVMLQDPMLPAAGYPSE--------TR 347
PK S L L+ FF+ Y + + ++ DP Y ++ R
Sbjct: 364 PKVSTGSIDILDNLGVLLIEFFELYGRNFSYDNLIISLDPNTEEPRYLTKGTNAVLNTAR 423
Query: 348 SLMPIRL--PCSPHEYCHSNITRSTF 371
S I + P P +NITRS++
Sbjct: 424 STFSIVIQDPADP----RNNITRSSY 445
>gi|320169914|gb|EFW46813.1| hypothetical protein CAOG_04771 [Capsaspora owczarzaki ATCC 30864]
Length = 1503
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 38/223 (17%)
Query: 106 RNVIQKLKEIVLAWVKRVA--WQRRLPKEQIAETH-----------ATILTYGSYGLGVH 152
+N+I +L + +L + + V+ Q P Q A H + ++ YGSY G+
Sbjct: 1151 KNLITELHDDILRFYQYVSKTAQSNAPNVQTAIHHVQGVVLSIWPNSYVVLYGSYSYGLS 1210
Query: 153 GSESDIDALCLGPEFA----TMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDG 208
SDID + + P A A+ L L + P S + ++ +++P+++F
Sbjct: 1211 LPHSDIDLVVVRPPMAPNSGAPAQSAVAELAARLTAFPWCSGVRAIETSRIPVVKF---- 1266
Query: 209 ILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSL--SGVRANKCILQLVPDLEKFQ 266
A + L +P VDV +TS L SG+ A + +
Sbjct: 1267 ------VATIGGLRIP--VDV-------SFHDTSRGPLSHSGILARDFVRSQISAYPMLA 1311
Query: 267 PVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGS 309
P++ +K + +G+ G L + +LV + Q +P S
Sbjct: 1312 PLVMVLKQYLHSKGLNEAYSGGLTSYGIVLLVTFLLQTNPPSS 1354
>gi|260948920|ref|XP_002618757.1| hypothetical protein CLUG_02216 [Clavispora lusitaniae ATCC 42720]
gi|238848629|gb|EEQ38093.1| hypothetical protein CLUG_02216 [Clavispora lusitaniae ATCC 42720]
Length = 567
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 53/238 (22%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE R VI++LK +R+A E +T A + +GS ++
Sbjct: 169 ISPSKEEIVVRNTVIRRLK-------RRIA-------EFWPQTQAHV--FGSCATDLYLP 212
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + L + L++ I + AKVP+++F +D P
Sbjct: 213 GSDIDMVVISTTGDYEQRGKLYQLSSFLRTNKLAKNIEVIATAKVPIIKF------VD-P 265
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+HV + S++ +G+ A + I + + + + ++ +K
Sbjct: 266 QYNIHV-------------------DISFERTNGLDAARRIRKWLDSMPGLRELVLIVKQ 306
Query: 275 WAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGS---------LNTLVANFFKTYA 322
+ + R + N+H G LGG IL+ H + HP+ S L TL+ FF+ Y
Sbjct: 307 FLRSRRL-NNVHVGGLGGYATIILMYHFLRLHPRVSTGNISVMENLGTLLIEFFELYG 363
>gi|410075647|ref|XP_003955406.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
gi|372461988|emb|CCF56271.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
Length = 630
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 43/199 (21%)
Query: 137 THATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKD 196
+ + +L +GSY ++ SDID + + L LK + + I +
Sbjct: 206 SDSELLVFGSYATDLYLPGSDIDCVVNSASGNKEHRSYLYELARFLKKKNLATSIEVIAR 265
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCI- 255
A+VP+++F I+ P + +H+ + S++ +GV A K I
Sbjct: 266 ARVPIIKF------IE-PESGVHI-------------------DISFERTNGVEAAKLIR 299
Query: 256 --LQLVPDLEKFQPVLRCIKLWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPK----- 307
L + P L + +++ L A+R ++H G LGG + LV HPK
Sbjct: 300 EWLDMTPGLRELVLIVKQF-LTARR---LNDVHTGGLGGFSIICLVYSFLHLHPKLRTDE 355
Query: 308 ----GSLNTLVANFFKTYA 322
+L L+ +FF+ Y
Sbjct: 356 IDPLENLGVLLIDFFELYG 374
>gi|238879008|gb|EEQ42646.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 603
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 46/223 (20%)
Query: 95 LVPSTEEEDKRRNVIQKLK-EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
+ PS+EE R NVI LK EI W ETH +GS ++
Sbjct: 180 ISPSSEEIVTRNNVISTLKKEIGKFWPG-------------TETHV----FGSCATDLYL 222
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
SDID + + L L+++ + + AKVP+++F +D
Sbjct: 223 PGSDIDMVVVSETGDYENRSRLYQLSTFLRTKKLAKNVEVIASAKVPIIKF------VD- 275
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
P + LH+ + S++ +G+ A K I + + + ++ IK
Sbjct: 276 PVSELHI-------------------DVSFERTNGLDAAKRIRRWLISTPGLRELVLVIK 316
Query: 274 LWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
+ + R + N+H G LGG I+ H + HPK S +++ A
Sbjct: 317 QFLRSRRL-NNVHVGGLGGYATIIMCYHFLRLHPKLSTSSMDA 358
>gi|68480208|ref|XP_715914.1| hypothetical protein CaO19.8059 [Candida albicans SC5314]
gi|68480321|ref|XP_715864.1| hypothetical protein CaO19.429 [Candida albicans SC5314]
gi|46437507|gb|EAK96852.1| hypothetical protein CaO19.429 [Candida albicans SC5314]
gi|46437559|gb|EAK96903.1| hypothetical protein CaO19.8059 [Candida albicans SC5314]
Length = 603
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 46/223 (20%)
Query: 95 LVPSTEEEDKRRNVIQKLK-EIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
+ PS+EE R NVI LK EI W ETH +GS ++
Sbjct: 180 ISPSSEEIVTRNNVISTLKKEIGKFWPG-------------TETHV----FGSCATDLYL 222
Query: 154 SESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDL 213
SDID + + L L+++ + + AKVP+++F +D
Sbjct: 223 PGSDIDMVVVSETGDYENRSRLYQLSTFLRTKKLAKNVEVIASAKVPIIKF------VD- 275
Query: 214 PYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
P + LH+ + S++ +G+ A K I + + + ++ IK
Sbjct: 276 PVSELHI-------------------DVSFERTNGLDAAKRIRRWLISTPGLRELVLVIK 316
Query: 274 LWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPKGSLNTLVA 315
+ + R + N+H G LGG I+ H + HPK S +++ A
Sbjct: 317 QFLRSRRL-NNVHVGGLGGYATIIMCYHFLRLHPKLSTSSMDA 358
>gi|224483450|gb|ACN51269.1| nuclear non-canonical poly(A) polymerase 1 [Trypanosoma brucei]
Length = 746
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 74/193 (38%), Gaps = 36/193 (18%)
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
+ +GS G+ SD+D L + T + L + V AKVPL
Sbjct: 366 VVFGSMATGLLLPLSDVDITILNVDVPTEEALRLLAREISLSGICNTAYPQLVLKAKVPL 425
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
++F+ G L+D VD+ S + G R ++ L+
Sbjct: 426 LKFQHCGSLLD--------------VDI------------SINARDGPRNTLIVIDLLKH 459
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP--KGS--------LN 311
+ +P++ +K + +RG+ HG LG L ++ Q HP GS L
Sbjct: 460 YREAEPLIVVVKYFLHQRGMDEPYHGGLGSFALTLMAISFLQQHPIYTGSPDQRLYCGLG 519
Query: 312 TLVANFFKTYAYW 324
L+ +FF+ Y +
Sbjct: 520 RLLVDFFRYYGMY 532
>gi|299473006|emb|CBN77407.1| nucleotidyltransferase family protein [Ectocarpus siliculosus]
Length = 434
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
L+P+ EE+ K I + ++KRV E+ + A + +GS G+
Sbjct: 276 LMPTPEEKAK--------TAIAITYIKRVV-------EETLGSEARVEIFGSQLTGLVLP 320
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID++ LG ++ + K EV E+ +K A+VPL++F
Sbjct: 321 SSDIDSVVLGGPRGSLGSLGAAMYRRQNKG--EVREVTVIKSARVPLVKF---------- 368
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+HV S + VDV + SG+++ + ++ ++ +P++ +K
Sbjct: 369 ---VHVGSGVQ-VDVC------------FDQESGMKSGRAARAMMRQMQPVRPLVMVLKA 412
Query: 275 WAKRRGVYGNLHGFLG 290
+ +R + HG +G
Sbjct: 413 YMGQRKLNETYHGGVG 428
>gi|261330131|emb|CBH13115.1| DNA polymerase sigma, putative [Trypanosoma brucei gambiense
DAL972]
Length = 746
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 74/193 (38%), Gaps = 36/193 (18%)
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
+ +GS G+ SD+D L + T + L + V AKVPL
Sbjct: 366 VVFGSMATGLLLPLSDVDITILNVDVPTEEALRLLAREISLSGICNTAYPQLVLKAKVPL 425
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
++F+ G L+D VD+ S + G R ++ L+
Sbjct: 426 LKFQHCGSLLD--------------VDI------------SINARDGPRNTLIVIDLLKH 459
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP--KGS--------LN 311
+ +P++ +K + +RG+ HG LG L ++ Q HP GS L
Sbjct: 460 YREAEPLIVVVKYFLHQRGMDEPYHGGLGSFALTLMAISFLQQHPIYTGSPDQRLYCGLG 519
Query: 312 TLVANFFKTYAYW 324
L+ +FF+ Y +
Sbjct: 520 RLLVDFFRYYGMY 532
>gi|72392291|ref|XP_846946.1| DNA polymerase sigma [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176235|gb|AAX70351.1| DNA polymerase sigma, putative [Trypanosoma brucei]
gi|70802976|gb|AAZ12880.1| DNA polymerase sigma, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 746
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 74/193 (38%), Gaps = 36/193 (18%)
Query: 142 LTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPL 201
+ +GS G+ SD+D L + T + L + V AKVPL
Sbjct: 366 VVFGSMATGLLLPLSDVDITILNVDVPTEEALRLLAREISLSGICNTAYPQLVLKAKVPL 425
Query: 202 MRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPD 261
++F+ G L+D VD+ S + G R ++ L+
Sbjct: 426 LKFQHCGSLLD--------------VDI------------SINARDGPRNTLIVIDLLKH 459
Query: 262 LEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP--KGS--------LN 311
+ +P++ +K + +RG+ HG LG L ++ Q HP GS L
Sbjct: 460 YREAEPLIVVVKYFLHQRGMDEPYHGGLGSFALTLMAISFLQQHPIYTGSPDQRLYCGLG 519
Query: 312 TLVANFFKTYAYW 324
L+ +FF+ Y +
Sbjct: 520 RLLVDFFRYYGMY 532
>gi|407918735|gb|EKG12001.1| PAP/25A-associated [Macrophomina phaseolina MS6]
Length = 1265
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 44/201 (21%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
DEE LS + L+PS E + +R+ +++KL I+ R W P +
Sbjct: 253 DEEEKLSGDMRELYDRLLPSEESQKRRKLLVEKLGRIL-----RTEW----PGNEF---- 299
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + +ESD+D +C+ + E ++ + K +S++ CV AK
Sbjct: 300 -KVHVFGSSGNLLCTAESDVD-VCIQTPMKKL-ESVHMLAEALAKH--GMSKVVCVASAK 354
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R K +Q+
Sbjct: 355 VPIVKV-WD---PELELAC-------------------DMNVNNTLALENTRMIKTYVQI 391
Query: 259 VPDLEKFQPVLRCIKLWAKRR 279
E+ +P+ IK W K+R
Sbjct: 392 D---ERVRPLTMIIKYWTKQR 409
>gi|50294195|ref|XP_449509.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528823|emb|CAG62485.1| unnamed protein product [Candida glabrata]
Length = 626
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 51/237 (21%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS EE + R I K++ VKR+ W T A + +GSY ++
Sbjct: 198 ISPSREEIETRNKTIAKIRR----SVKRL-W-----------TDADLQVFGSYATDMYLP 241
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + L LK+ + + + ++VP+++F P
Sbjct: 242 GSDIDCVVNSKSGDKENRQYLYELARHLKNDGLATRVEVIAKSRVPIIKFV-------EP 294
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ +H+ + S++ +G+ A K I + + D + + +K
Sbjct: 295 ESDIHI-------------------DVSFERSNGLEAAKLIREWIGDTPGLRELTLVVKQ 335
Query: 275 WAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK---------GSLNTLVANFFKTYA 322
+ R + G LGG + LV + HP+ +L L+ FF+ Y
Sbjct: 336 FLHARRLNDVHTGGLGGFSIICLVFSFLRLHPRIITGDIDPLDNLGVLLIEFFELYG 392
>gi|339239329|ref|XP_003381219.1| putative poly(A) RNA polymerase Cid13 [Trichinella spiralis]
gi|316975766|gb|EFV59165.1| putative poly(A) RNA polymerase Cid13 [Trichinella spiralis]
Length = 397
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 44/177 (24%)
Query: 140 TILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHC------ 193
IL GS G+ ++ D+D + P T ++++ H L++ C
Sbjct: 108 AILLTGSSVTGLGLNDCDMDLCLITP---TPRREYYIERHLALQTLQACYNAFCNPNSPI 164
Query: 194 ----VKDAKVPLMRFKFD---GILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSL 246
+ AKVP++R KF G +D+ C HVL + N + LR
Sbjct: 165 CQHQIITAKVPILRGKFVNPWGYSVDI--NCNHVLGI------YNSYLLR---------- 206
Query: 247 SGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
S V+ + ++F P++ CIK WAK +G+ +G+L +LV + Q
Sbjct: 207 SYVKID----------DRFAPLVICIKHWAKLKGLCDAQNGYLNSYSWTLLVLNYLQ 253
>gi|71659078|ref|XP_821264.1| DNA polymerase sigma [Trypanosoma cruzi strain CL Brener]
gi|70886638|gb|EAN99413.1| DNA polymerase sigma, putative [Trypanosoma cruzi]
Length = 685
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 235 LRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHL 294
L D+D S + G R + + ++ + +P++ +K + ++RG++ HG LG
Sbjct: 378 LLDVD-VSINAEDGQRNSAIVADMLCSFPEARPLIVLVKYFLQQRGMHEPYHGGLGSFAT 436
Query: 295 AILVAHVCQNHP----------KGSLNTLVANFFKTYAYW 324
+LV QNHP L TL+ +FF+ Y +
Sbjct: 437 TLLVISFLQNHPIYTERPEERAYTGLGTLLVDFFRYYGMY 476
>gi|84468450|dbj|BAE71308.1| hypothetical protein [Trifolium pratense]
Length = 518
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 63/243 (25%)
Query: 93 EGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVH 152
E L P+ EE+ KR I+ + E++ + W H + +GS+ G++
Sbjct: 120 EFLSPTPEEKAKRDAAIESVFEVI-----KHIW-----------PHCQVEIFGSFRTGLY 163
Query: 153 GSESDIDALCL-----GPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRF--K 205
SDID + L P+ A + L R +I + A+VP+++F K
Sbjct: 164 LPTSDIDVVILKSGLPNPQIGLNA------ISRSLSQRSMAKKIQVIGKARVPIIKFVEK 217
Query: 206 FDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKF 265
G+ D+ + D+D +G +A + I + V +
Sbjct: 218 KSGLSFDISF---------------------DID-------NGPKAAEYIQEAVAKWPQL 249
Query: 266 QPVLRCIKLWAKRRGVYGNLHGFLGG----VHLAILVAHVCQNHPKG--SLNTLVANFFK 319
+P+ +K++ ++R + G +G L ++ +V Q+ P +L L+ +FF
Sbjct: 250 RPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVRQSQPTAEHNLGVLLVHFFD 309
Query: 320 TYA 322
Y
Sbjct: 310 FYG 312
>gi|242020171|ref|XP_002430529.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515693|gb|EEB17791.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 943
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 88 QLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSY 147
+LM+N L S E K NV W + W PKE + + +++ GS
Sbjct: 320 KLMSNMRLKISAHERSKN-NVTSG------EWSIGMKWTNDAPKELLKAENISLIASGSC 372
Query: 148 GLGVHGSESD--------IDALCL----GPEFATMAEDFFVVLHN 180
G VHG E + +D+LC PEFA ++ DF V + N
Sbjct: 373 GALVHGLEDEFQEVRSAGVDSLCQLSLDNPEFAILSLDFLVDMFN 417
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 236 RDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIK 273
R LD + +SL+GVR IL+LVPD + F LRC+K
Sbjct: 56 RGLDLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|403331574|gb|EJY64740.1| Poly(A) RNA polymerase putative [Oxytricha trifallax]
Length = 316
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 56/237 (23%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ PS E+++ R V ++E++ K + H + +GS G++
Sbjct: 26 VTPSKEDKEIRNKVATSIEEVI--------------KGVFPDCH--VFVFGSCATGLNLP 69
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + P+ + + + + + + I +K+ KVPL++ + D
Sbjct: 70 NSDIDLIVYQPDVS--ESRMITKVADAIVRQKKCKTIDVLKNTKVPLIK------ITDSE 121
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGV---RANKCILQLVPDLEKFQPVLRC 271
+ NVD+ S+ +GV + K +LQ+ P+L+ VL+C
Sbjct: 122 FGV--------NVDI------------SFNRTNGVYCVKLVKQLLQMFPELKPLMMVLKC 161
Query: 272 IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK-GSLNTL-----VANFFKTYA 322
+ K R + G +G L ++V Q K G+ N L + +FFK Y
Sbjct: 162 ---FLKSRQLNEPYSGGVGSFLLTMMVTSFLQRQYKLGNTNNLDLGKQLLDFFKLYG 215
>gi|347969656|ref|XP_001231185.2| AGAP003314-PA [Anopheles gambiae str. PEST]
gi|333469670|gb|EAU75994.2| AGAP003314-PA [Anopheles gambiae str. PEST]
Length = 639
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 114/291 (39%), Gaps = 66/291 (22%)
Query: 22 VDFYPQNANFGVVTPQSLGVINPNLISPSQVLVPCNSPVFLVPSFNFPLNPSVLDQMDEE 81
D Y N + V S ISPS++ +P+ + P + + V+ + +
Sbjct: 241 ADEYAANGDKESVASSSTKTPTNRTISPSELSPTLTAPLLIGPGDSLSKDMWVMFHANRQ 300
Query: 82 RSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVA-WQRRLPKEQIAETHAT 140
+ + M +L E++ + ++++ W L K ++ +T
Sbjct: 301 SDATFAKKM--------------------RLWEMLYGYFRQMSSW---LQKHELYLMGST 337
Query: 141 ILTYGSYGLGVHGSESDIDALCL----GPEFA---TMAEDFFVVLHNMLKSRPEVSEIHC 193
I +G+ SD+D +C+ GP + T A + + + + ++S P S H
Sbjct: 338 ISGFGT-------DTSDMD-MCIVDIDGPTYCDSRTEALNNLLRVKSFIESLPTCSFEHL 389
Query: 194 -VKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRAN 252
+ AKVP++RF+ V EN+D+ DL + +
Sbjct: 390 DLIRAKVPILRFRH----------------VEENIDI-------DLSINNCVGIRNTHLL 426
Query: 253 KCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQ 303
C QL E+ +P++ IKLWA+ + +H + L ++V + Q
Sbjct: 427 NCYAQLD---ERVRPLVLVIKLWAQHHNLNDPIHSTMSSYSLVLMVLNFLQ 474
>gi|7019641|emb|CAB75788.1| putative protein [Arabidopsis thaliana]
Length = 690
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 136 ETHATILTYGSYGLGVHGSESDID-ALCLGPEFATMAED-------FFVVLHNMLKSRPE 187
E+ + YGS+ + ++ S+SD+D ++ G + + + F L+ +
Sbjct: 84 ESSPVLEAYGSFVMDMYSSQSDLDVSINFGNGTSEIPREKKLEILKRFAKKLRSLQGEGQ 143
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
V + + AKVP+++F G ++ LSV +LN +R + + +
Sbjct: 144 VKNVESIFSAKVPIVKFSDQGTGVECD------LSVENKDGILNSQIVRIISQIDGR--- 194
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA-HVCQNHP 306
FQ + +K WAK V LH L V + +LVA H+ +P
Sbjct: 195 -----------------FQKLCLLVKHWAKAHEVNSALHRTLNSVSITLLVALHLQTQNP 237
>gi|42565594|ref|NP_190161.2| Nucleotidyltransferase family protein [Arabidopsis thaliana]
gi|30793987|gb|AAP40443.1| unknown protein [Arabidopsis thaliana]
gi|110739217|dbj|BAF01523.1| hypothetical protein [Arabidopsis thaliana]
gi|332644545|gb|AEE78066.1| Nucleotidyltransferase family protein [Arabidopsis thaliana]
Length = 682
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 136 ETHATILTYGSYGLGVHGSESDID-ALCLGPEFATMAED-------FFVVLHNMLKSRPE 187
E+ + YGS+ + ++ S+SD+D ++ G + + + F L+ +
Sbjct: 84 ESSPVLEAYGSFVMDMYSSQSDLDVSINFGNGTSEIPREKKLEILKRFAKKLRSLQGEGQ 143
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
V + + AKVP+++F G ++ LSV +LN +R + + +
Sbjct: 144 VKNVESIFSAKVPIVKFSDQGTGVECD------LSVENKDGILNSQIVRIISQIDGR--- 194
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA-HVCQNHP 306
FQ + +K WAK V LH L V + +LVA H+ +P
Sbjct: 195 -----------------FQKLCLLVKHWAKAHEVNSALHRTLNSVSITLLVALHLQTQNP 237
>gi|297819094|ref|XP_002877430.1| hypothetical protein ARALYDRAFT_484955 [Arabidopsis lyrata subsp.
lyrata]
gi|297323268|gb|EFH53689.1| hypothetical protein ARALYDRAFT_484955 [Arabidopsis lyrata subsp.
lyrata]
Length = 680
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 136 ETHATILTYGSYGLGVHGSESDID-ALCLG---PEFATMAE----DFFVVLHNMLKSRPE 187
E+ + YGS+ + ++ S+SD+D ++ G PE + F L+
Sbjct: 84 ESSPVLEAYGSFVMDMYSSQSDLDVSINFGNGTPELPREKKLEILKRFAKKLRSLQGEGH 143
Query: 188 VSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLS 247
V + + AKVP+++F G ++ LSV +LN +R + + +
Sbjct: 144 VKNVESIFSAKVPIVKFSDQGTGVECD------LSVENKDGILNSQIVRIISQIDGR--- 194
Query: 248 GVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVA-HVCQNHP 306
FQ + +K WAK V LH L V + +LVA H+ +P
Sbjct: 195 -----------------FQKLCMLVKHWAKAHEVNSALHRTLNSVSITLLVALHLQTQNP 237
>gi|50302781|ref|XP_451327.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640458|emb|CAH02915.1| KLLA0A07359p [Kluyveromyces lactis]
Length = 684
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 63/243 (25%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ P+ +E ++R I KLKE V+ W +++ +GSY ++
Sbjct: 202 ISPNRQEIEQRNQAIAKLKEAVVEL-----W-----------PDSSLNCFGSYATDLYLP 245
Query: 155 ESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLP 214
SDID + + L + LK + +++ + A+VP+++F P
Sbjct: 246 GSDIDCVVRSASGDKENRNALYSLASFLKRKQLATQVEVIAKARVPIIKFV-------EP 298
Query: 215 YACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKL 274
+ +H+ + S++ +G+ A + I + + QP LR + L
Sbjct: 299 ESKIHI-------------------DVSFERTNGLEAARVIRGWLEE----QPGLRELVL 335
Query: 275 WAK-----RRGVYGNLH-GFLGGVHLAILVAHVCQNHPK---------GSLNTLVANFFK 319
K RR N+H G LGG + LV + HP+ +L L+ +FF+
Sbjct: 336 IVKQFLHARR--LNNVHTGGLGGYSIICLVYTFLKLHPRVLTGDIDPLENLGVLLIDFFE 393
Query: 320 TYA 322
Y
Sbjct: 394 LYG 396
>gi|30679719|ref|NP_195887.2| uncharacterized protein [Arabidopsis thaliana]
gi|332003121|gb|AED90504.1| uncharacterized protein [Arabidopsis thaliana]
Length = 372
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 37/122 (30%)
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQ 473
V+LSA+NQ+ L GWVKSR + CDPNP+E Q
Sbjct: 116 VHLSAANQEHLS---GWVKSR---------SLWHFCDPNPSE-----------------Q 146
Query: 474 PGRTNLLDIVAVEKDFLK-NIHNG-FQGSPGRMGLLVVQASQLSKSSQL--DFGSGRRTK 529
T +++ D+ N++NG F G GR+ L V++ASQL K+ + + S + TK
Sbjct: 147 SSHT----LLSFTGDYTSLNLNNGSFLGPVGRIQLSVLKASQLPKNCECASNNRSKKVTK 202
Query: 530 AC 531
C
Sbjct: 203 TC 204
>gi|367014043|ref|XP_003681521.1| hypothetical protein TDEL_0E00670 [Torulaspora delbrueckii]
gi|359749182|emb|CCE92310.1| hypothetical protein TDEL_0E00670 [Torulaspora delbrueckii]
Length = 663
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
A + +GSY ++ SDID + + L + LKS+ + + + A+
Sbjct: 246 ADLQVFGSYATDLYLPGSDIDCVVNSKGRDKENRNSLYSLASFLKSKELATRVEVIAKAR 305
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++F P + +H+ + S++ ++G+ A + I +
Sbjct: 306 VPIIKFV-------EPQSQIHI-------------------DVSFERINGLEAARLIREW 339
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLH-GFLGGVHLAILVAHVCQNHPK---------G 308
+ + + ++ +K + R + N+H G LGG + LV HP+
Sbjct: 340 LEETPGLRELVLIVKQFLHSRRL-NNVHTGGLGGFSIICLVYSFLHLHPRVVSDEIDPLD 398
Query: 309 SLNTLVANFFKTYA 322
+L L+ +FF+ Y
Sbjct: 399 NLGVLLIDFFELYG 412
>gi|444314869|ref|XP_004178092.1| hypothetical protein TBLA_0A07840 [Tetrapisispora blattae CBS 6284]
gi|387511131|emb|CCH58573.1| hypothetical protein TBLA_0A07840 [Tetrapisispora blattae CBS 6284]
Length = 711
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 120/315 (38%), Gaps = 62/315 (19%)
Query: 77 QMDEERSLSLVQLMTNE------GLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLP 130
Q D + + L+T E + PS EE + R I K+++ V + W+
Sbjct: 192 QHDHSKQNEVSDLLTEEIKDFVAYISPSREEIELRNQTIGKIRKAV-----KKLWK---- 242
Query: 131 KEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSE 190
++ + +GSY ++ SDID + + L + LK ++
Sbjct: 243 -------NSDLYVFGSYATDLYLPGSDIDCVIISSAGDKENRHSLYQLSSWLKQNKLATK 295
Query: 191 IHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVR 250
+ + A+VP+++F P + +H+ + S++ +G+
Sbjct: 296 VEVIAKARVPIIKFV-------EPSSNIHI-------------------DVSFERSNGLE 329
Query: 251 ANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK--- 307
A K I + + ++ IK + R + G LGG+ + +V HP+
Sbjct: 330 AAKTIRDWLNSTPGLRELVLIIKQFLNSRRLNDVHLGGLGGLSIICMVYSFLSLHPRILT 389
Query: 308 ------GSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSET-RSLMPIR----LPC 356
+L L+ +FF+ Y V L AA P + R ++P+R L
Sbjct: 390 NDIDPLDNLGVLLLDFFELYGKNFAYDDVALSFQDGRAAYMPKKQWRDILPVRTTYALAI 449
Query: 357 SPHEYCHSNITRSTF 371
+NI+RS++
Sbjct: 450 QDPNDPTNNISRSSY 464
>gi|401415443|ref|XP_003872217.1| topoisomerase-related function protein-like protein [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488440|emb|CBZ23686.1| topoisomerase-related function protein-like protein [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 912
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIH--CVKD 196
+++L YGS + SD+D L + AE+ L + S ++ +
Sbjct: 440 SSVLVYGSMYTHLLLPLSDLDITLL--DVPVPAEEALTSLAKEISSAGLCENVYPQVILK 497
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
KVPL++F G LID VD+ S ++ G R ++CI+
Sbjct: 498 TKVPLIKFIHKGSLID--------------VDI------------SVGAVDGKRNSECIV 531
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP---------- 306
Q + + P+ +K + +RG++ +G LG +LV + HP
Sbjct: 532 QYMNMYPEALPLTLVVKYFVTQRGMHEPYYGGLGSYAATLLVVAFLRQHPIYTTQPEKRT 591
Query: 307 KGSLNTLVANFFKT 320
L L+ +FF+T
Sbjct: 592 MTGLGKLLVDFFRT 605
>gi|55296010|dbj|BAD68901.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55296026|dbj|BAD69437.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 207
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF 175
+ A +L++GSY LGVH SDID L +GP + + DFF
Sbjct: 4 QATALVLSFGSYHLGVHSRGSDIDVLVVGPSY--VDRDFF 41
>gi|7413656|emb|CAB86004.1| putative protein [Arabidopsis thaliana]
Length = 340
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 37/122 (30%)
Query: 414 VYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHIVFYWGLQ 473
V+LSA+NQ+ L GWVKSR + CDPNP+E Q
Sbjct: 116 VHLSAANQEHLS---GWVKSR---------SLWHFCDPNPSE-----------------Q 146
Query: 474 PGRTNLLDIVAVEKDFLK-NIHNG-FQGSPGRMGLLVVQASQLSKSSQL--DFGSGRRTK 529
T +++ D+ N++NG F G GR+ L V++ASQL K+ + + S + TK
Sbjct: 147 SSHT----LLSFTGDYTSLNLNNGSFLGPVGRIQLSVLKASQLPKNCECASNNRSKKVTK 202
Query: 530 AC 531
C
Sbjct: 203 TC 204
>gi|321458952|gb|EFX70011.1| hypothetical protein DAPPUDRAFT_328539 [Daphnia pulex]
Length = 951
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 38/182 (20%)
Query: 119 WVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESD--------IDALCL----GPE 166
W W P+E + +++ G+ G VHG E + +D+LCL P
Sbjct: 344 WASGARWADDKPRENLDAESVSLIHSGACGAFVHGLEDEFMEVRSASLDSLCLLALSNPR 403
Query: 167 FATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPEN 226
FAT++ DF V + N + I C+ L+ + D + I +L V E+
Sbjct: 404 FATLSLDFLVDMFNDEIEEVRLKAIDCMTKIS-QLIVLREDQLEI--------ILGVLED 454
Query: 227 VDVLNPFFLRDLDETSWKSLSGVRANK------CILQLVPDLEKF----QPVLRCIKLWA 276
+V ++ E + L R + C+ L+ +L+++ + + RC++L
Sbjct: 455 SNV-------EIREGLHRMLGACRLSTKACLKLCVQALLDNLKRYSQDKRSIWRCLQLLG 507
Query: 277 KR 278
R
Sbjct: 508 PR 509
>gi|125571299|gb|EAZ12814.1| hypothetical protein OsJ_02733 [Oryza sativa Japonica Group]
Length = 127
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF 175
+ A +L++GSY LGVH SDID L +GP + + DFF
Sbjct: 4 QATALVLSFGSYHLGVHSRGSDIDVLVVGPSY--VDRDFF 41
>gi|67989518|ref|NP_001018181.1| poly(A) polymerase Cid14 [Schizosaccharomyces pombe 972h-]
gi|81175166|sp|Q9UTN3.2|CID14_SCHPO RecName: Full=Poly(A) RNA polymerase cid14; Short=PAP; AltName:
Full=Caffeine-induced death protein 14; AltName:
Full=Polynucleotide adenylyltransferase cid14
gi|62554069|emb|CAI79317.1| poly(A) polymerase Cid14 [Schizosaccharomyces pombe]
Length = 684
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 87/221 (39%), Gaps = 45/221 (20%)
Query: 95 LVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGS 154
+ P+ EE R+ ++ ++ + VL W ++ +GS+ ++
Sbjct: 252 ITPTPEEHAVRKTLVSRINQAVLQ-----KW-----------PDVSLYVFGSFETKLYLP 295
Query: 155 ESDIDALCLGPE--FATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILID 212
SD+D + + PE + +D FV+ H+ LK SE+ + A VP+++F +D
Sbjct: 296 TSDLDLVIISPEHHYRGTKKDMFVLAHH-LKKLKLASEVQVITTANVPIIKF------VD 348
Query: 213 LPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCI 272
P +HV + S+ G++ + + +P++ I
Sbjct: 349 -PLTKVHV-------------------DISFNQPGGLKTCLVVNGFMKKYPALRPLVIII 388
Query: 273 KLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTL 313
K + R + G L + LV Q HP+ S ++
Sbjct: 389 KHFLNMRALNEVFLGGLSSYAIVCLVVSFLQLHPRLSTGSM 429
>gi|328860813|gb|EGG09918.1| hypothetical protein MELLADRAFT_115680 [Melampsora larici-populina
98AG31]
Length = 987
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 103/259 (39%), Gaps = 48/259 (18%)
Query: 95 LVPSTEEEDKRRNVIQKL-KEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHG 153
+ P+ EE++ R +I+ + K + + W A ++ +GS+G ++
Sbjct: 245 IRPTREEDELRLMIIEMIRKAVTMQW-----------------PDADVVPFGSFGTKLYL 287
Query: 154 SESDIDALCLGPEFATMAED-FFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFK--FDGIL 210
DID + L A+ L +L+ + ++ + AKVP+++FK F
Sbjct: 288 PGGDIDLVILSTRMMKDAKSKILYRLAPLLREQNIGQDVVVIAKAKVPIIKFKTIFGNFQ 347
Query: 211 IDLPYACLHVLSVPENVDVL---NPFFLRDLDETSW-----KSLSGVRANKCILQLVPDL 262
+D+ + L E V+ L + +DL ++ S R + L++ +
Sbjct: 348 VDISINQSNGLVALEKVNELLDDVKYLSKDLRAEQRHHQHSRNQSKRRNEETNLEMDEEE 407
Query: 263 EKFQPVL------RC----IKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPK----- 307
E V+ +C IK K+RG+ G LG + LV Q HPK
Sbjct: 408 EAISKVVEELGAAKCMILVIKSVLKQRGMNEVYSGGLGSYSIICLVISFLQLHPKIQRGD 467
Query: 308 ----GSLNTLVANFFKTYA 322
+L L+ FF+ Y
Sbjct: 468 IDPNKNLGVLLLEFFELYG 486
>gi|125526971|gb|EAY75085.1| hypothetical protein OsI_02979 [Oryza sativa Indica Group]
Length = 127
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 136 ETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFF 175
+ A +L++GSY LGVH SDID L +GP + + DFF
Sbjct: 4 QATALVLSFGSYHLGVHSRGSDIDVLVVGPSY--VDRDFF 41
>gi|403373923|gb|EJY86891.1| Poly(A) RNA polymerase putative [Oxytricha trifallax]
Length = 403
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 50/232 (21%)
Query: 97 PSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSES 156
+TE++ RR V+ ++ +IV KE ++ A ++ +GS G+ S
Sbjct: 120 TTTEDQQARRKVVSRIHKIV--------------KECFSQ--AKVMIFGSCATGLDLPNS 163
Query: 157 DIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYA 216
D+D L P+ ++ L L I +K AKVP+++ L D +
Sbjct: 164 DVDLLVYYPD--QREQNMINRLAGSLMKSGICKSIEAIKHAKVPIIK------LQDKETS 215
Query: 217 CLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWA 276
C N+D+ S+ +G+ K + L+ + +P++ +K +
Sbjct: 216 C--------NIDI------------SFNRTNGIYCVKLVKTLMIKYPELRPLMIVLKAFL 255
Query: 277 KRRGVYGNLHGFLGGVHLAIL------VAHVCQNHPKGSLNTLVANFFKTYA 322
K RG+ G + L +L +A+ K L + +FF+ Y
Sbjct: 256 KCRGLNETYSGGISSFLLTMLATSYLQMAYKSGKTDKMDLGKHLIDFFELYG 307
>gi|322703123|gb|EFY94737.1| hypothetical protein MAA_09765 [Metarhizium anisopliae ARSEF 23]
Length = 1275
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 79 DEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVKRVAWQRRLPKEQIAETH 138
DEER L+ L+P+ E E+KR+ ++QKL++I + P I
Sbjct: 285 DEERKLATDMREIYNRLLPTEEVEEKRKKLVQKLEKI---------FNDEWPGHDI---- 331
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAK 198
+ +GS G + +SD+D +C+ + + + ++ ++L R + ++ C+ AK
Sbjct: 332 -RVNLFGSSGNLLCSDDSDVD-ICITTSWQEL--EGVCMIADLLARR-GMEKVVCISAAK 386
Query: 199 VPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQL 258
VP+++ +D +L AC D++ + +L R + ++
Sbjct: 387 VPIVKI-WD---PELGLAC-------------------DMNVNNTLALENTRMVRIYVEA 423
Query: 259 VPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLG--GVHLAILVAHVCQNHPKGSLNTLVAN 316
P + + + IK W +RR + + G +L + + +N K S+ L+
Sbjct: 424 DPRVRQLAMI---IKYWTRRR-IINDADGTPSDFADNLKKIKGYGSKN--KSSVAELLFQ 477
Query: 317 FFKTYAY 323
FF+ YA+
Sbjct: 478 FFRFYAH 484
>gi|157864534|ref|XP_001680977.1| topoisomerase-related function protein-like protein [Leishmania
major strain Friedlin]
gi|68124270|emb|CAJ07032.1| topoisomerase-related function protein-like protein [Leishmania
major strain Friedlin]
Length = 916
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 40/193 (20%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIH--CVKD 196
+++L YGS + SD+D L + AE+ L + S ++ +
Sbjct: 443 SSVLVYGSMYTHLLLPLSDLDITLL--DVPVSAEEALTSLAKEISSAGMCENVYPQVILK 500
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
KVPL++F G LID VD+ S ++ G R ++CI+
Sbjct: 501 TKVPLIKFVHKGSLID--------------VDI------------SVGAVDGKRNSECIV 534
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP---------- 306
Q + + P+ +K + +RG++ +G LG +LV + HP
Sbjct: 535 QYMNMYPEALPLTLVVKYFVMQRGMHEPYYGGLGSYAATLLVVAFLRQHPIYTTQPEKRT 594
Query: 307 KGSLNTLVANFFK 319
L L+ +FF+
Sbjct: 595 MTGLGRLLVDFFR 607
>gi|239609033|gb|EEQ86020.1| poly(A) polymerase [Ajellomyces dermatitidis ER-3]
gi|327354327|gb|EGE83184.1| Poly(A) polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1129
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 46/218 (21%)
Query: 62 LVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKEIVLAWVK 121
L+P + PL LD DE++ ++ + + L+PS E E +R + KL++++
Sbjct: 124 LLPRESGPLK-EQLDPADEKKLTGDMRELYHR-LLPSEESEQRRSKFVNKLEKLL----- 176
Query: 122 RVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNM 181
++ P I + +GS G + S+SD+D +C+ + + + +L +
Sbjct: 177 ----NKQWPGNNI-----RVHVFGSSGNKLCSSDSDVD-ICITTTYKELEK--VCILADF 224
Query: 182 LKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDET 241
L ++ + + CV A+VP+++ +D +L AC +++V N L +
Sbjct: 225 L-AKSGMERVVCVSHARVPIVKI-WD---PELRLAC--------DMNVNNTLALENT--- 268
Query: 242 SWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRR 279
+ I V E+ +P+ +K W KRR
Sbjct: 269 -----------RMIRTYVEIDERVRPLAMIVKYWTKRR 295
>gi|398010636|ref|XP_003858515.1| topoisomerase-related function protein-like protein [Leishmania
donovani]
gi|322496723|emb|CBZ31792.1| topoisomerase-related function protein-like protein [Leishmania
donovani]
Length = 916
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 40/193 (20%)
Query: 139 ATILTYGSYGLGVHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIH--CVKD 196
+++L YGS + SD+D L + AE+ L + S ++ +
Sbjct: 445 SSVLVYGSMYTHLLLPLSDLDITLL--DVPVPAEEALTSLAKEISSAGLCENVYPQVILK 502
Query: 197 AKVPLMRFKFDGILIDLPYACLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCIL 256
KVPL++F G LID VD+ S ++ G R ++CI+
Sbjct: 503 TKVPLIKFVHKGSLID--------------VDI------------SVGAVDGKRNSECIV 536
Query: 257 QLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHP---------- 306
Q + + P+ +K + +RG++ +G LG +LV + HP
Sbjct: 537 QYMNMYPEALPLTLVVKYFVMQRGMHEPYYGGLGSYAATLLVVAFLRQHPIYTTQPEKRT 596
Query: 307 KGSLNTLVANFFK 319
L L+ +FF+
Sbjct: 597 MTGLGRLLVDFFR 609
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,607,648,386
Number of Sequences: 23463169
Number of extensions: 423729077
Number of successful extensions: 822023
Number of sequences better than 100.0: 956
Number of HSP's better than 100.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 819300
Number of HSP's gapped (non-prelim): 1075
length of query: 570
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 422
effective length of database: 8,886,646,355
effective search space: 3750164761810
effective search space used: 3750164761810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)