BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008303
(570 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 133/201 (66%), Gaps = 2/201 (0%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
+++ +++P IV+Y++S+ E G + I++ +CEGGD+ + I LF E+++ W VQ+
Sbjct: 76 VLANMKHPNIVQYRESFEENGS-LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVVGTPSYMCP 121
+AL ++H ILHRD+K NIFLTKD ++LGDFG+A++L S +LA + +GTP Y+ P
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+ + PY +KSDIW+LGC +YE+ +LK AF+A M+ L+ KI P+ YS R
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLR 254
Query: 182 GLVKSMLRKNPELRPSAAELL 202
LV + ++NP RPS +L
Sbjct: 255 SLVSQLFKRNPRDRPSVNSIL 275
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 120/209 (57%), Gaps = 9/209 (4%)
Query: 3 LISKIRNPFIVEYKDSWVER-GCYVCIIIGFCEGGDMAEAIKKANS--KLFSEEKLCKWL 59
L+ ++++P IV Y D ++R + I++ +CEGGD+A I K + EE + + +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 60 VQLLMALDYLH-----ANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVV 113
QL +AL H + +LHRD+K +N+FL Q+++LGDFGLA+IL D D A V
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV 177
Query: 114 GTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLP 173
GTP YM PE + + Y KSDIWSLGC +YE+ +L P F AF + L KI + +P
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 174 TKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+YS ++ ML RPS E+L
Sbjct: 238 YRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 120/209 (57%), Gaps = 9/209 (4%)
Query: 3 LISKIRNPFIVEYKDSWVER-GCYVCIIIGFCEGGDMAEAIKKANS--KLFSEEKLCKWL 59
L+ ++++P IV Y D ++R + I++ +CEGGD+A I K + EE + + +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 60 VQLLMALDYLH-----ANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVV 113
QL +AL H + +LHRD+K +N+FL Q+++LGDFGLA+IL D A + V
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV 177
Query: 114 GTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLP 173
GTP YM PE + + Y KSDIWSLGC +YE+ +L P F AF + L KI + +P
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 174 TKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+YS ++ ML RPS E+L
Sbjct: 238 YRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 120/209 (57%), Gaps = 9/209 (4%)
Query: 3 LISKIRNPFIVEYKDSWVER-GCYVCIIIGFCEGGDMAEAIKKANS--KLFSEEKLCKWL 59
L+ ++++P IV Y D ++R + I++ +CEGGD+A I K + EE + + +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 60 VQLLMALDYLH-----ANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVV 113
QL +AL H + +LHRD+K +N+FL Q+++LGDFGLA+IL D A + V
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV 177
Query: 114 GTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLP 173
GTP YM PE + + Y KSDIWSLGC +YE+ +L P F AF + L KI + +P
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 174 TKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+YS ++ ML RPS E+L
Sbjct: 238 YRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 121/204 (59%), Gaps = 7/204 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIK--KANSKLFSEEKLCKW 58
++L+ ++ +P +++Y S++E + I++ + GD++ IK K +L E + K+
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDN-ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 59 LVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPS 117
VQL AL+++H+ ++HRD+K +N+F+T ++LGD GL + +S A+ S+VGTP
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 201
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKA--FDMQALINKINKSIVAPLPTK 175
YM PE + + Y KSDIWSLGC +YEM +L+ F ++ +L KI + PLP+
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 261
Query: 176 -YSGAFRGLVKSMLRKNPELRPSA 198
YS R LV + +PE RP
Sbjct: 262 HYSEELRQLVNMCINPDPEKRPDV 285
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 126/219 (57%), Gaps = 14/219 (6%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+++ +P+IV+ ++ G + I+I FC GG +AI + +E ++
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGG-AVDAIMLELDRGLTEPQIQVVCR 124
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYM 119
Q+L AL++LH+ I+HRD+K N+ +T + DIRL DFG+ AK L + S +GTP +M
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 184
Query: 120 CPEL-----LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPL-- 172
PE+ + D PY K+DIWSLG + EM ++P + ++ KI KS L
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT 244
Query: 173 PTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
P+K+S FR +K L KNPE RPSAA+LL H P+V
Sbjct: 245 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH----PFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 126/219 (57%), Gaps = 14/219 (6%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+++ +P+IV+ ++ G + I+I FC GG +AI + +E ++
Sbjct: 59 IEILATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGG-AVDAIMLELDRGLTEPQIQVVCR 116
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYM 119
Q+L AL++LH+ I+HRD+K N+ +T + DIRL DFG+ AK L + S +GTP +M
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 176
Query: 120 CPEL-----LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPL-- 172
PE+ + D PY K+DIWSLG + EM ++P + ++ KI KS L
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT 236
Query: 173 PTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
P+K+S FR +K L KNPE RPSAA+LL H P+V
Sbjct: 237 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH----PFV 271
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 117/202 (57%), Gaps = 8/202 (3%)
Query: 6 KIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMA 65
++++P I+E + + E YV +++ C G+M +K K FSE + ++ Q++
Sbjct: 67 QLKHPSILELYN-YFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITG 124
Query: 66 LDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTPSYMCPELL 124
+ YLH++ ILHRD+ SN+ LT++ +I++ DFGLA L + ++ GTP+Y+ PE+
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184
Query: 125 ADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVA--PLPTKYSGAFRG 182
+G +SD+WSLGC Y + +P FD + N +NK ++A +P+ S +
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRP---PFDTDTVKNTLNKVVLADYEMPSFLSIEAKD 241
Query: 183 LVKSMLRKNPELRPSAAELLRH 204
L+ +LR+NP R S + +L H
Sbjct: 242 LIHQLLRRNPADRLSLSSVLDH 263
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 115/205 (56%), Gaps = 5/205 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++S+ + ++ +Y S++ +G + II+ + GG + ++ F E ++ L
Sbjct: 72 ITVLSQCDSSYVTKYYGSYL-KGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLK 127
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
++L LDYLH+ +HRD+K +N+ L++ D++L DFG+A LT + ++ VGTP +M
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGA 179
PE++ Y SK+DIWSLG E+ +P ++ I K+ L ++ +
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKS 247
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
F+ + + L K+P RP+A ELL+H
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKH 272
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 5/214 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++S+ +P+I Y S++ + + II+ + GG + +K E + L
Sbjct: 68 ITVLSQCDSPYITRYFGSYL-KSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILR 123
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
++L LDYLH+ +HRD+K +N+ L++ D++L DFG+A LT + + VGTP +M
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGA 179
PE++ Y K+DIWSLG E+ +P ++ I K+ L ++S
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKP 243
Query: 180 FRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLK 213
F+ V++ L K+P RP+A ELL+H + Y K
Sbjct: 244 FKEFVEACLNKDPRFRPTAKELLKHKFITRYTKK 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 5/197 (2%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+ NP +V + + E +V +++ C + E K+ K +E + ++ Q + +
Sbjct: 99 LDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGV 155
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLA-KILTSDDLASSVVGTPSYMCPELLA 125
YLH N ++HRD+K N+FL D D+++GDFGLA KI + ++ GTP+Y+ PE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC 215
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
+ + DIWSLGC +Y + KP F+ ++ +I K+ + +P + L++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 274
Query: 186 SMLRKNPELRPSAAELL 202
ML +P LRPS AELL
Sbjct: 275 RMLHADPTLRPSVAELL 291
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 14/219 (6%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++++ +P IV+ D++ + I+I FC GG +A+ + +E ++
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENN-LWILIEFCAGG-AVDAVMLELERPLTESQIQVVCK 142
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYM 119
Q L AL+YLH N I+HRD+K NI T D DI+L DFG+ AK + S +GTP +M
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWM 202
Query: 120 CPELLA-----DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPL-- 172
PE++ D PY K+D+WSLG + EM ++P + ++ KI KS L
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 173 PTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
P+++S F+ +K L KN + R + ++LL+H P+V
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH----PFV 297
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+ NP +V + + E +V +++ C + E K+ K +E + ++ Q + +
Sbjct: 99 LDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGV 155
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLA-KILTSDDLASSVVGTPSYMCPELLA 125
YLH N ++HRD+K N+FL D D+++GDFGLA KI + + GTP+Y+ PE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 215
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
+ + DIWSLGC +Y + KP F+ ++ +I K+ + +P + L++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 274
Query: 186 SMLRKNPELRPSAAELL 202
ML +P LRPS AELL
Sbjct: 275 RMLHADPTLRPSVAELL 291
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+ NP +V + + E +V +++ C + E K+ K +E + ++ Q + +
Sbjct: 99 LDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGV 155
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLA-KILTSDDLASSVVGTPSYMCPELLA 125
YLH N ++HRD+K N+FL D D+++GDFGLA KI + + GTP+Y+ PE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC 215
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
+ + DIWSLGC +Y + KP F+ ++ +I K+ + +P + L++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 274
Query: 186 SMLRKNPELRPSAAELL 202
ML +P LRPS AELL
Sbjct: 275 RMLHADPTLRPSVAELL 291
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
+VE +S++ G + +++ F EGG + + + +EE++ + +L AL LHA
Sbjct: 210 VVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA 265
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLADIPYG 130
++HRD+K +I LT D ++L DFG A++ +VGTP +M PEL++ +PYG
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 131 SKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT------KYSGAFRGLV 184
+ DIWSLG + EM +P + F+ L K K I LP K S + +G +
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPPY--FNEPPL--KAMKMIRDNLPPRLKNLHKVSPSLKGFL 381
Query: 185 KSMLRKNPELRPSAAELLRHVHL 207
+L ++P R +AAELL+H L
Sbjct: 382 DRLLVRDPAQRATAAELLKHPFL 404
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+ NP +V + + E +V +++ C + E K+ K +E + ++ Q + +
Sbjct: 83 LDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGV 139
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLA-KILTSDDLASSVVGTPSYMCPELLA 125
YLH N ++HRD+K N+FL D D+++GDFGLA KI + + GTP+Y+ PE+L
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 199
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
+ + DIWSLGC +Y + KP F+ ++ +I K+ + +P + L++
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 258
Query: 186 SMLRKNPELRPSAAELL 202
ML +P LRPS AELL
Sbjct: 259 RMLHADPTLRPSVAELL 275
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 14/219 (6%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++++ +P IV+ D++ + I+I FC GG +A+ + +E ++
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENN-LWILIEFCAGG-AVDAVMLELERPLTESQIQVVCK 142
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYM 119
Q L AL+YLH N I+HRD+K NI T D DI+L DFG+ AK S +GTP +M
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 120 CPELLA-----DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPL-- 172
PE++ D PY K+D+WSLG + EM ++P + ++ KI KS L
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 173 PTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
P+++S F+ +K L KN + R + ++LL+H P+V
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH----PFV 297
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 120/220 (54%), Gaps = 15/220 (6%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++++ +P IV+ D++ + I+I FC GG +A+ + +E ++
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENN-LWILIEFCAGG-AVDAVMLELERPLTESQIQVVCK 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA--SSVVGTPSY 118
Q L AL+YLH N I+HRD+K NI T D DI+L DFG++ T + S +GTP +
Sbjct: 116 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYW 175
Query: 119 MCPELLA-----DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPL- 172
M PE++ D PY K+D+WSLG + EM ++P + ++ KI KS L
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 235
Query: 173 -PTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
P+++S F+ +K L KN + R + ++LL+H P+V
Sbjct: 236 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH----PFV 271
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 111/205 (54%), Gaps = 5/205 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++S+ +P++ +Y S++ + + II+ + GG + ++ E ++ L
Sbjct: 71 ITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILR 126
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
++L LDYLH+ +HRD+K +N+ L++ +++L DFG+A LT + + VGTP +M
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 186
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGA 179
PE++ Y SK+DIWSLG E+ +P ++ I K+ L YS
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 246
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ V++ L K P RP+A ELL+H
Sbjct: 247 LKEFVEACLNKEPSFRPTAKELLKH 271
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 5/205 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++S+ +P++ +Y S++ + + II+ + GG + ++ E ++ L
Sbjct: 56 ITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILR 111
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
++L LDYLH+ +HRD+K +N+ L++ +++L DFG+A LT + ++ VGTP +M
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 171
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGA 179
PE++ Y SK+DIWSLG E+ +P ++ I K+ L YS
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ V++ L K P RP+A ELL+H
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 5/205 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++S+ +P++ +Y S++ + + II+ + GG + ++ E ++ L
Sbjct: 76 ITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILR 131
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
++L LDYLH+ +HRD+K +N+ L++ +++L DFG+A LT + ++ VGTP +M
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 191
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGA 179
PE++ Y SK+DIWSLG E+ +P ++ I K+ L YS
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 251
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ V++ L K P RP+A ELL+H
Sbjct: 252 LKEFVEACLNKEPSFRPTAKELLKH 276
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 111/205 (54%), Gaps = 5/205 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++S+ +P++ +Y S++ + + II+ + GG + ++ E ++ L
Sbjct: 56 ITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILR 111
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
++L LDYLH+ +HRD+K +N+ L++ +++L DFG+A LT + + VGTP +M
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 171
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGA 179
PE++ Y SK+DIWSLG E+ +P ++ I K+ L YS
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ V++ L K P RP+A ELL+H
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
+VE +S++ G + +++ F EGG + + + +EE++ + +L AL LHA
Sbjct: 133 VVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA 188
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLADIPYG 130
++HRD+K +I LT D ++L DFG A++ +VGTP +M PEL++ +PYG
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 131 SKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT------KYSGAFRGLV 184
+ DIWSLG + EM +P + F+ L K K I LP K S + +G +
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPY--FNEPPL--KAMKMIRDNLPPRLKNLHKVSPSLKGFL 304
Query: 185 KSMLRKNPELRPSAAELLRHVHL 207
+L ++P R +AAELL+H L
Sbjct: 305 DRLLVRDPAQRATAAELLKHPFL 327
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 14/219 (6%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++++ +P IV+ D++ + I+I FC GG +A+ + +E ++
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENN-LWILIEFCAGG-AVDAVMLELERPLTESQIQVVCK 142
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYM 119
Q L AL+YLH N I+HRD+K NI T D DI+L DFG+ AK +GTP +M
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWM 202
Query: 120 CPELLA-----DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPL-- 172
PE++ D PY K+D+WSLG + EM ++P + ++ KI KS L
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 173 PTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
P+++S F+ +K L KN + R + ++LL+H P+V
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH----PFV 297
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
+VE +S++ G + +++ F EGG + + + +EE++ + +L AL LHA
Sbjct: 88 VVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA 143
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLADIPYG 130
++HRD+K +I LT D ++L DFG A++ +VGTP +M PEL++ +PYG
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 131 SKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT------KYSGAFRGLV 184
+ DIWSLG + EM +P + F+ L K K I LP K S + +G +
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPY--FNEPPL--KAMKMIRDNLPPRLKNLHKVSPSLKGFL 259
Query: 185 KSMLRKNPELRPSAAELLRHVHL 207
+L ++P R +AAELL+H L
Sbjct: 260 DRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
+VE +S++ G + +++ F EGG + + + +EE++ + +L AL LHA
Sbjct: 90 VVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA 145
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLADIPYG 130
++HRD+K +I LT D ++L DFG A++ +VGTP +M PEL++ +PYG
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 131 SKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT------KYSGAFRGLV 184
+ DIWSLG + EM +P + F+ L K K I LP K S + +G +
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPY--FNEPPL--KAMKMIRDNLPPRLKNLHKVSPSLKGFL 261
Query: 185 KSMLRKNPELRPSAAELLRHVHL 207
+L ++P R +AAELL+H L
Sbjct: 262 DRLLVRDPAQRATAAELLKHPFL 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
+VE +S++ G + +++ F EGG + + + +EE++ + +L AL LHA
Sbjct: 79 VVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA 134
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLADIPYG 130
++HRD+K +I LT D ++L DFG A++ +VGTP +M PEL++ +PYG
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 131 SKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT------KYSGAFRGLV 184
+ DIWSLG + EM +P + F+ L K K I LP K S + +G +
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPY--FNEPPL--KAMKMIRDNLPPRLKNLHKVSPSLKGFL 250
Query: 185 KSMLRKNPELRPSAAELLRHVHL 207
+L ++P R +AAELL+H L
Sbjct: 251 DRLLVRDPAQRATAAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 15/200 (7%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
+VE +S++ G + +++ F EGG + + + +EE++ + +L AL LHA
Sbjct: 83 VVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA 138
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLADIPYG 130
++HRD+K +I LT D ++L DFG A++ +VGTP +M PEL++ +PYG
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 131 SKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT------KYSGAFRGLV 184
+ DIWSLG + EM +P + F+ L K K I LP K S + +G +
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPY--FNEPPL--KAMKMIRDNLPPRLKNLHKVSPSLKGFL 254
Query: 185 KSMLRKNPELRPSAAELLRH 204
+L ++P R +AAELL+H
Sbjct: 255 DRLLVRDPAQRATAAELLKH 274
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 11/215 (5%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++ + +P +V+Y S+ + + I++ +C G +++ I+ N K +E+++ L
Sbjct: 75 ISIMQQCDSPHVVKYYGSYF-KNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQ 132
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA--SSVVGTPSY 118
L L+YLH +HRD+K NI L + +L DFG+A LT D +A + V+GTP +
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFW 191
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKI--NKSIVAPLPTKY 176
M PE++ +I Y +DIWSLG EM KP + I I N P +
Sbjct: 192 MAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW 251
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
S F VK L K+PE R +A +LL+H P+V
Sbjct: 252 SDNFTDFVKQCLVKSPEQRATATQLLQH----PFV 282
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
+NP IV Y DS++ G + +++ + GG + + + + E ++ + L AL+
Sbjct: 75 KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALE 130
Query: 68 YLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLAD 126
+LH+N ++HRD+K NI L D ++L DFG A+I S++VGTP +M PE++
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 127 IPYGSKSDIWSLGCCIYEMTSLKPAFKAFD-MQAL-INKINKSIVAPLPTKYSGAFRGLV 184
YG K DIWSLG EM +P + + ++AL + N + P K S FR +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 250
Query: 185 KSMLRKNPELRPSAAELLRHVHLQ 208
L + E R SA ELL+H L+
Sbjct: 251 NRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
+NP IV Y DS++ G + +++ + GG + + + + E ++ + L AL+
Sbjct: 75 KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALE 130
Query: 68 YLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLAD 126
+LH+N ++HRD+K NI L D ++L DFG A+I S +VGTP +M PE++
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 127 IPYGSKSDIWSLGCCIYEMTSLKPAFKAFD-MQAL-INKINKSIVAPLPTKYSGAFRGLV 184
YG K DIWSLG EM +P + + ++AL + N + P K S FR +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 250
Query: 185 KSMLRKNPELRPSAAELLRHVHLQ 208
L + E R SA ELL+H L+
Sbjct: 251 NRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 23/230 (10%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK------LFSEEK 54
++ +S+ +P IV Y S+V + + +++ GG + + IK +K + E
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL------TSDDL 108
+ L ++L L+YLH N +HRDVK NI L +D +++ DFG++ L T + +
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 109 ASSVVGTPSYMCPELLADI-PYGSKSDIWSLGCCIYEM-TSLKPAFKAFDMQALINKINK 166
+ VGTP +M PE++ + Y K+DIWS G E+ T P K M+ L+ +
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242
Query: 167 SIVA--------PLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
+ + KY +FR ++ L+K+PE RP+AAELLRH Q
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
+NP IV Y DS++ G + +++ + GG + + + + E ++ + L AL+
Sbjct: 75 KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALE 130
Query: 68 YLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLAD 126
+LH+N ++HRD+K NI L D ++L DFG A+I S +VGTP +M PE++
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 127 IPYGSKSDIWSLGCCIYEMTSLKPAFKAFD-MQAL-INKINKSIVAPLPTKYSGAFRGLV 184
YG K DIWSLG EM +P + + ++AL + N + P K S FR +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 250
Query: 185 KSMLRKNPELRPSAAELLRHVHLQ 208
L + E R SA ELL+H L+
Sbjct: 251 NRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 23/230 (10%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK------LFSEEK 54
++ +S+ +P IV Y S+V + + +++ GG + + IK +K + E
Sbjct: 59 IQAMSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL------TSDDL 108
+ L ++L L+YLH N +HRDVK NI L +D +++ DFG++ L T + +
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 109 ASSVVGTPSYMCPELLADI-PYGSKSDIWSLGCCIYEM-TSLKPAFKAFDMQALINKINK 166
+ VGTP +M PE++ + Y K+DIWS G E+ T P K M+ L+ +
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 237
Query: 167 SIVA--------PLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
+ + KY +FR ++ L+K+PE RP+AAELLRH Q
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCS 82
G + +++ F EGG + + + +EE++ + +L AL YLH ++HRD+K
Sbjct: 114 GDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 83 NIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCC 141
+I LT D I+L DFG A++ +VGTP +M PE+++ +PYG++ DIWSLG
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 230
Query: 142 IYEMTSLKPA-FKAFDMQALINKINKSIVAPLPT--KYSGAFRGLVKSMLRKNPELRPSA 198
+ EM +P F +QA+ +I S+ + K S RG + ML + P R +A
Sbjct: 231 VIEMIDGEPPYFNEPPLQAM-RRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATA 289
Query: 199 AELLRHVHLQ 208
ELL H L+
Sbjct: 290 QELLGHPFLK 299
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
+NP IV Y DS++ G + +++ + GG + + + + E ++ + L AL+
Sbjct: 76 KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALE 131
Query: 68 YLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLAD 126
+LH+N ++HRD+K NI L D ++L DFG A+I S +VGTP +M PE++
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 127 IPYGSKSDIWSLGCCIYEMTSLKPAFKAFD-MQAL-INKINKSIVAPLPTKYSGAFRGLV 184
YG K DIWSLG EM +P + + ++AL + N + P K S FR +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 251
Query: 185 KSMLRKNPELRPSAAELLRHVHLQ 208
L + E R SA EL++H L+
Sbjct: 252 NRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
+NP IV Y DS++ G + +++ + GG + + + + E ++ + L AL+
Sbjct: 76 KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALE 131
Query: 68 YLHANHILHRDVKCSNIFLTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLAD 126
+LH+N ++HR++K NI L D ++L DFG A+I S++VGTP +M PE++
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 127 IPYGSKSDIWSLGCCIYEMTSLKPAFKAFD-MQAL-INKINKSIVAPLPTKYSGAFRGLV 184
YG K DIWSLG EM +P + + ++AL + N + P K S FR +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 251
Query: 185 KSMLRKNPELRPSAAELLRHVHLQ 208
L + E R SA EL++H L+
Sbjct: 252 NRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Query: 18 SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHR 77
+ E +V +++ C + E K+ K +E + +L Q+++ YLH N ++HR
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 78 DVKCSNIFLTKDQDIRLGDFGLA-KILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIW 136
D+K N+FL +D ++++GDFGLA K+ + ++ GTP+Y+ PE+L+ + + D+W
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 205
Query: 137 SLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
S+GC +Y + KP F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 206 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 264
Query: 197 SAAELL 202
+ ELL
Sbjct: 265 TINELL 270
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Query: 18 SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHR 77
+ E +V +++ C + E K+ K +E + +L Q+++ YLH N ++HR
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 78 DVKCSNIFLTKDQDIRLGDFGLA-KILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIW 136
D+K N+FL +D ++++GDFGLA K+ + ++ GTP+Y+ PE+L+ + + D+W
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 137 SLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
S+GC +Y + KP F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 260
Query: 197 SAAELL 202
+ ELL
Sbjct: 261 TINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Query: 18 SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHR 77
+ E +V +++ C + E K+ K +E + +L Q+++ YLH N ++HR
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 78 DVKCSNIFLTKDQDIRLGDFGLA-KILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIW 136
D+K N+FL +D ++++GDFGLA K+ + ++ GTP+Y+ PE+L+ + + D+W
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 137 SLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
S+GC +Y + KP F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 260
Query: 197 SAAELL 202
+ ELL
Sbjct: 261 TINELL 266
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 18 SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHR 77
+ E +V +++ C + E K+ K +E + +L Q+++ YLH N ++HR
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 78 DVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVV-GTPSYMCPELLADIPYGSKSDIW 136
D+K N+FL +D ++++GDFGLA + D V+ GTP+Y+ PE+L+ + + D+W
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 223
Query: 137 SLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
S+GC +Y + KP F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 224 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 282
Query: 197 SAAELL 202
+ ELL
Sbjct: 283 TINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 18 SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHR 77
+ E +V +++ C + E K+ K +E + +L Q+++ YLH N ++HR
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 78 DVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVV-GTPSYMCPELLADIPYGSKSDIW 136
D+K N+FL +D ++++GDFGLA + D V+ GTP+Y+ PE+L+ + + D+W
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 225
Query: 137 SLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
S+GC +Y + KP F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 226 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 284
Query: 197 SAAELL 202
+ ELL
Sbjct: 285 TINELL 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 18 SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHR 77
+ E +V +++ C + E K+ K +E + +L Q+++ YLH N ++HR
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 78 DVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVV-GTPSYMCPELLADIPYGSKSDIW 136
D+K N+FL +D ++++GDFGLA + D V+ GTP+Y+ PE+L+ + + D+W
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 199
Query: 137 SLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
S+GC +Y + KP F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 200 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 258
Query: 197 SAAELL 202
+ ELL
Sbjct: 259 TINELL 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYV-----CIIIGFCEGGDMAEAIKKANSKLFSEEKL 55
+ + K+R+P ++Y RGCY+ +++ +C G A + + + K E ++
Sbjct: 105 VRFLQKLRHPNTIQY------RGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEI 156
Query: 56 CKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT 115
L L YLH+++++HRDVK NI L++ ++LGDFG A I+ A+ VGT
Sbjct: 157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---ANXFVGT 213
Query: 116 PSYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAP 171
P +M PE++ + Y K D+WSLG E+ K P F M AL + A
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL 273
Query: 172 LPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+S FR V S L+K P+ RP++ LL+H
Sbjct: 274 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYV-----CIIIGFCEGGDMAEAIKKANSKLFSEEKL 55
+ + K+R+P ++Y RGCY+ +++ +C G A + + + K E ++
Sbjct: 66 VRFLQKLRHPNTIQY------RGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEI 117
Query: 56 CKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT 115
L L YLH+++++HRDVK NI L++ ++LGDFG A I+ A+ VGT
Sbjct: 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---ANXFVGT 174
Query: 116 PSYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAP 171
P +M PE++ + Y K D+WSLG E+ K P F M AL + A
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL 234
Query: 172 LPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+S FR V S L+K P+ RP++ LL+H
Sbjct: 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WL 59
+E++ K+ +P I++ K+ + Y I++ EGG++ + + N +L +E CK +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFDKVV-GNKRL--KEATCKLYF 120
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTP 116
Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +KIL L ++ GTP
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 117 SYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-ALINKINKSIVAPL 172
+Y+ PE+L + Y D WSLG ++ S P F Q +L ++I +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 173 P---TKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P + S LVK +L +P+ R + E LRH LQ
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WL 59
+E++ K+ +P I++ K+ + Y I++ EGG++ + + N +L +E CK +
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFDKVV-GNKRL--KEATCKLYF 119
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTP 116
Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +KIL L ++ GTP
Sbjct: 120 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 117 SYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-ALINKINKSIVAPL 172
+Y+ PE+L + Y D WSLG ++ S P F Q +L ++I +
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 239
Query: 173 P---TKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P + S LVK +L +P+ R + E LRH LQ
Sbjct: 240 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WL 59
+E++ K+ +P I++ K+ + Y I++ EGG++ + + N +L +E CK +
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFDKVV-GNKRL--KEATCKLYF 245
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTP 116
Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +KIL L ++ GTP
Sbjct: 246 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 305
Query: 117 SYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-ALINKINKSIVAPL 172
+Y+ PE+L + Y D WSLG ++ S P F Q +L ++I +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 365
Query: 173 PTKY---SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P + S LVK +L +P+ R + E LRH LQ
Sbjct: 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WL 59
+E++ K+ +P I++ K+ + Y I++ EGG++ + + N +L +E CK +
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFDKVV-GNKRL--KEATCKLYF 259
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTP 116
Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +KIL L ++ GTP
Sbjct: 260 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 319
Query: 117 SYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-ALINKINKSIVAPL 172
+Y+ PE+L + Y D WSLG ++ S P F Q +L ++I +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 379
Query: 173 PTKY---SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P + S LVK +L +P+ R + E LRH LQ
Sbjct: 380 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WL 59
+E++ K+ +P I++ K+ + Y I++ EGG++ + + N +L +E CK +
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFDKVV-GNKRL--KEATCKLYF 126
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTP 116
Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +KIL L ++ GTP
Sbjct: 127 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 117 SYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-ALINKINKSIVAPL 172
+Y+ PE+L + Y D WSLG ++ S P F Q +L ++I +
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 246
Query: 173 P---TKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P + S LVK +L +P+ R + E LRH LQ
Sbjct: 247 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WL 59
+E++ K+ +P I++ K+ + Y I++ EGG++ + + N +L +E CK +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFDKVV-GNKRL--KEATCKLYF 120
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTP 116
Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +KIL L ++ GTP
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 117 SYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-ALINKINKSIVAPL 172
+Y+ PE+L + Y D WSLG ++ S P F Q +L ++I +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 173 P---TKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P + S LVK +L +P+ R + E LRH LQ
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WL 59
+E++ K+ +P I++ K+ + Y I++ EGG++ + + N +L +E CK +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFDKVV-GNKRL--KEATCKLYF 120
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTP 116
Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +KIL L ++ GTP
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 117 SYMCPELLADI---PYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-ALINKINKSIVAPL 172
+Y+ PE+L + Y D WSLG ++ S P F Q +L ++I +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 173 P---TKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P + S LVK +L +P+ R + E LRH LQ
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 10/208 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ R+PF+ K ++ + +C ++ + GG++ + + ++F+EE+ + ++
Sbjct: 61 VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 117
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCP 121
+ AL+YLH+ +++RD+K N+ L KD I++ DFGL K SD + GTP Y+ P
Sbjct: 118 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 177
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L D YG D W LG +YEM + F D + L I + P S +
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAK 236
Query: 182 GLVKSMLRKNPELR----PS-AAELLRH 204
L+ +L+K+P+ R PS A E++ H
Sbjct: 237 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 264
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 85 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 140
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+S VGT
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 259
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 260 PKARDLVEKLL 270
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 10/208 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ R+PF+ K ++ + +C ++ + GG++ + + ++F+EE+ + ++
Sbjct: 58 VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 114
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCP 121
+ AL+YLH+ +++RD+K N+ L KD I++ DFGL K SD + GTP Y+ P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L D YG D W LG +YEM + F D + L I + P S +
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAK 233
Query: 182 GLVKSMLRKNPELR----PS-AAELLRH 204
L+ +L+K+P+ R PS A E++ H
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 10/208 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ R+PF+ K ++ + +C ++ + GG++ + + ++F+EE+ + ++
Sbjct: 58 VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 114
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCP 121
+ AL+YLH+ +++RD+K N+ L KD I++ DFGL K SD + GTP Y+ P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L D YG D W LG +YEM + F D + L I + P S +
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAK 233
Query: 182 GLVKSMLRKNPELR----PS-AAELLRH 204
L+ +L+K+P+ R PS A E++ H
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 9/204 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 81 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 136
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+S VGT
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 255
Query: 178 GAFRGLVKSMLRKNPELRPSAAEL 201
R LV+ +L + R E+
Sbjct: 256 PKARDLVEKLLVLDATKRLGCEEM 279
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 10/208 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ R+PF+ K ++ + +C ++ + GG++ + + ++F+EE+ + ++
Sbjct: 58 VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 114
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCP 121
+ AL+YLH+ +++RD+K N+ L KD I++ DFGL K SD GTP Y+ P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L D YG D W LG +YEM + F D + L I + P S +
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAK 233
Query: 182 GLVKSMLRKNPELR----PS-AAELLRH 204
L+ +L+K+P+ R PS A E++ H
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 10/208 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ R+PF+ K ++ + +C ++ + GG++ + + ++F+EE+ + ++
Sbjct: 58 VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 114
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCP 121
+ AL+YLH+ +++RD+K N+ L KD I++ DFGL K SD GTP Y+ P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L D YG D W LG +YEM + F D + L I + P S +
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAK 233
Query: 182 GLVKSMLRKNPELR----PS-AAELLRH 204
L+ +L+K+P+ R PS A E++ H
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 137
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A++ VGT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 256
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 257 PKARDLVEKLL 267
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
++++ + +PF+V+ ++ G + +I+ F GGD+ + K +F+EE + +L +
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE 138
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMC 120
L + LD+LH+ I++RD+K NI L ++ I+L DFGL+K + + A S GT YM
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + +D WS G ++EM + F+ D + + I K+ + +P S
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG-MPQFLSTEA 257
Query: 181 RGLVKSMLRKNPELR-----PSAAELLRHV 205
+ L++++ ++NP R A E+ RHV
Sbjct: 258 QSLLRALFKRNPANRLGSGPDGAEEIKRHV 287
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 117
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 236
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 237 PKARDLVEKLL 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 116
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 235
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 236 PKARDLVEKLL 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++ KI++P IV D + E G ++ +I+ GG++ + I ++E + +
Sbjct: 67 IAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIF 123
Query: 61 QLLMALDYLHANHILHRDVKCSNIF---LTKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L A+ YLH I+HRD+K N+ L +D I + DFGL+K+ + S+ GTP
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS---IVAPLPT 174
Y+ PE+LA PY D WS+G Y + P F + L +I K+ +P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 243
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + + ++ ++ K+PE R + + L+H
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G + + I+K S F E +
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGS--FDETCTRFYTA 139
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+S VGT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 258
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 259 PKARDLVEKLL 269
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 10/208 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ R+PF+ K ++ + +C ++ + GG++ + + ++F+EE+ + ++
Sbjct: 63 VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 119
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCP 121
+ AL+YLH+ +++RD+K N+ L KD I++ DFGL K SD GTP Y+ P
Sbjct: 120 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 179
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L D YG D W LG +YEM + F D + L I + P S +
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAK 238
Query: 182 GLVKSMLRKNPELR----PS-AAELLRH 204
L+ +L+K+P+ R PS A E++ H
Sbjct: 239 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 266
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 10/208 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ R+PF+ K ++ + +C ++ + GG++ + + ++F+EE+ + ++
Sbjct: 58 VLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 114
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCP 121
+ AL+YLH+ +++RD+K N+ L KD I++ DFGL K SD GTP Y+ P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L D YG D W LG +YEM + F D + L I + P S +
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAK 233
Query: 182 GLVKSMLRKNPELR----PS-AAELLRH 204
L+ +L+K+P+ R PS A E++ H
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 234
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 235 PKARDLVEKLL 245
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 114
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 233
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 234 PKARDLVEKLL 244
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 137
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 256
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 257 PKARDLVEKLL 267
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 139
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-LEYDFPEKFF 258
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 259 PKARDLVEKLL 269
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 139
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 258
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 259 PKARDLVEKLL 269
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 137
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 256
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 257 PKARDLVEKLL 267
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 137
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 256
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 257 PKARDLVEKLL 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 85 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 140
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 259
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 260 PKARDLVEKLL 270
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 139
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 258
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 259 PKARDLVEKLL 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
+VE S++ G + +++ F +GG + + + + +EE++ +L AL YLHA
Sbjct: 104 VVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHA 159
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVVGTPSYMCPELLADIPYG 130
++HRD+K +I LT D ++L DFG ++ D +VGTP +M PE+++ Y
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 131 SKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT-----KYSGAFRGLVK 185
++ DIWSLG + EM +P + + + ++ S P P K S R ++
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PPPKLKNSHKVSPVLRDFLE 276
Query: 186 SMLRKNPELRPSAAELLRHVHLQPYVLKVHL 216
ML ++P+ R +A ELL H P++L+ L
Sbjct: 277 RMLVRDPQERATAQELLDH----PFLLQTGL 303
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 5/198 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ ++++PFIV+ ++ + G + +I+ + GG++ +++ +F E+ C +L ++
Sbjct: 74 ILEEVKHPFIVDLIYAF-QTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEI 130
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSYMCP 121
MAL +LH I++RD+K NI L ++L DFGL K D + + GT YM P
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L + D WSLG +Y+M + P F + + I+KI K + LP + R
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPPYLTQEAR 249
Query: 182 GLVKSMLRKNPELRPSAA 199
L+K +L++N R A
Sbjct: 250 DLLKKLLKRNAASRLGAG 267
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 139
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 258
Query: 178 GAFRGLVKSMLRKNPELRPSAAEL 201
R LV+ +L + R E+
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++ KI++P IV D + E G ++ +I+ GG++ + I ++E + +
Sbjct: 67 IAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIF 123
Query: 61 QLLMALDYLHANHILHRDVKCSNIF---LTKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L A+ YLH I+HRD+K N+ L +D I + DFGL+K+ + S+ GTP
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS---IVAPLPT 174
Y+ PE+LA PY D WS+G Y + P F + L +I K+ +P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 243
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + + ++ ++ K+PE R + + L+H
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 66 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 121
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 240
Query: 178 GAFRGLVKSMLRKNPELRPSAAEL 201
R LV+ +L + R E+
Sbjct: 241 PKARDLVEKLLVLDATKRLGCEEM 264
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ ++ +PFIV+ ++ G + +I+ F GGD+ + K +F+EE + +L +
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE 134
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMC 120
L +ALD+LH+ I++RD+K NI L ++ I+L DFGL+K + + A S GT YM
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + +D WS G ++EM + F+ D + + I K+ + +P S
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEA 253
Query: 181 RGLVKSMLRKNPELRPSAA-----ELLRH 204
+ L++ + ++NP R A E+ RH
Sbjct: 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRH 282
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++ KI++P IV D + E G ++ +I+ GG++ + I ++E + +
Sbjct: 67 IAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIF 123
Query: 61 QLLMALDYLHANHILHRDVKCSNIF---LTKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L A+ YLH I+HRD+K N+ L +D I + DFGL+K+ + S+ GTP
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS---IVAPLPT 174
Y+ PE+LA PY D WS+G Y + P F + L +I K+ +P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 243
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + + ++ ++ K+PE R + + L+H
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ FC G + + IK EE + ++L L +LH + ++HRD+K N+
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 86 LTKDQDIRLGDFGL-AKILTSDDLASSVVGTPSYMCPELLA-----DIPYGSKSDIWSLG 139
LT++ +++L DFG+ A++ + ++ +GTP +M PE++A D Y KSD+WSLG
Sbjct: 162 LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 221
Query: 140 CCIYEMTSLKPAF-KAFDMQALINKINKSIVAPLPT-KYSGAFRGLVKSMLRKNPELRPS 197
EM P M+AL I ++ L + K+S F+ ++S L KN RP+
Sbjct: 222 ITAIEMAEGAPPLCDMHPMRALF-LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA 280
Query: 198 AAELLRH--VHLQPYVLKVHLKL 218
+L++H + QP +V ++L
Sbjct: 281 TEQLMKHPFIRDQPNERQVRIQL 303
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 81 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 136
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFF 255
Query: 178 GAFRGLVKSMLRKNPELRPSAAEL 201
R LV+ +L + R E+
Sbjct: 256 PKARDLVEKLLVLDATKRLGCEEM 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++ KI++P IV D + E G ++ +I+ GG++ + I ++E + +
Sbjct: 67 IAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIF 123
Query: 61 QLLMALDYLHANHILHRDVKCSNIF---LTKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L A+ YLH I+HRD+K N+ L +D I + DFGL+K+ + S+ GTP
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS---IVAPLPT 174
Y+ PE+LA PY D WS+G Y + P F + L +I K+ +P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 243
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + + ++ ++ K+PE R + + L+H
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCII--------IGFCEGGDMAEAIKKANSKLFSEE 53
+++S++ +PF V+ Y C + + + G++ + I+K S F E
Sbjct: 89 DVMSRLDHPFFVK---------LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDET 137
Query: 54 KLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LAS 110
+ +++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+
Sbjct: 138 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
Query: 111 SVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVA 170
VGT Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K +
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEY 256
Query: 171 PLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P K+ R LV+ +L + R E+
Sbjct: 257 DFPEKFFPKARDLVEKLLVLDATKRLGCEEM 287
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 14/222 (6%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMA-EAIKKANSK-LFSEEKLCKWLVQLLM 64
+++P IVE +++ G + ++ F +G D+ E +K+A++ ++SE ++ Q+L
Sbjct: 83 LKHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDL-ASSVVGTPSYMC 120
AL Y H N+I+HRDVK N+ L ++ ++LGDFG+A L L A VGTP +M
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG-- 178
PE++ PYG D+W G ++ + S F + L I K P ++S
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHIS 260
Query: 179 -AFRGLVKSMLRKNPELRPSAAELLRHVHLQP---YVLKVHL 216
+ + LV+ ML +P R + E L H L+ Y K+HL
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHL 302
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 5/198 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ ++++PFIV+ ++ + G + +I+ + GG++ +++ +F E+ C +L ++
Sbjct: 74 ILEEVKHPFIVDLIYAF-QTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEI 130
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSYMCP 121
MAL +LH I++RD+K NI L ++L DFGL K D + GT YM P
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
E+L + D WSLG +Y+M + P F + + I+KI K + LP + R
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPPYLTQEAR 249
Query: 182 GLVKSMLRKNPELRPSAA 199
L+K +L++N R A
Sbjct: 250 DLLKKLLKRNAASRLGAG 267
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 139
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P K+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-LEYDFPEKFF 258
Query: 178 GAFRGLVKSMLRKNPELRPSAAEL 201
R LV+ +L + R E+
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ ++ +PFIV+ ++ G + +I+ F GGD+ + K +F+EE + +L +
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE 134
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMC 120
L +ALD+LH+ I++RD+K NI L ++ I+L DFGL+K + + A S GT YM
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + +D WS G ++EM + F+ D + + I K+ + +P S
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEA 253
Query: 181 RGLVKSMLRKNPELRPSAA-----ELLRH 204
+ L++ + ++NP R A E+ RH
Sbjct: 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRH 282
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ ++ +PFIV+ ++ G + +I+ F GGD+ + K +F+EE + +L +
Sbjct: 79 DILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAE 135
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMC 120
L +ALD+LH+ I++RD+K NI L ++ I+L DFGL+K + + A S GT YM
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + +D WS G ++EM + F+ D + + I K+ + +P S
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEA 254
Query: 181 RGLVKSMLRKNPELRPSAA-----ELLRH 204
+ L++ + ++NP R A E+ RH
Sbjct: 255 QSLLRMLFKRNPANRLGAGPDGVEEIKRH 283
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 27 CIIIG--FCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNI 84
C+ I FC+ G + + I+K + + + Q+ +DY+H+ ++HRD+K SNI
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI 167
Query: 85 FLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYE 144
FL + +++GDFGL L +D + GT YM PE ++ YG + D+++LG + E
Sbjct: 168 FLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLR 203
+ L AF+ + I++ + K + L++ +L K PE RP+ +E+LR
Sbjct: 228 L--LHVCDTAFETSKFFTDLRDGIISDIFDKKE---KTLLQKLLSKKPEDRPNTSEILR 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 19/216 (8%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAI--KKANSKLFSEEKLCKW 58
+E++ + +P I++ + + E + I++ CEGG++ E I +A K SE + +
Sbjct: 71 IEVLKSLDHPNIIKIFEVF-EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 59 LVQLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGT 115
+ Q++ AL Y H+ H++H+D+K NI + I++ DFGLA++ SD+ +++ GT
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGT 189
Query: 116 PSYMCPELLA-DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKI-----NKSI- 168
YM PE+ D+ + K DIWS G +Y + + F ++ + K N ++
Sbjct: 190 ALYMAPEVFKRDVTF--KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE 247
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
PL + L+K ML K+PE RPSAA++L H
Sbjct: 248 CRPLTPQAV----DLLKQMLTKDPERRPSAAQVLHH 279
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 2 ELISKIRNPFIVE-YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++S++ +PF V+ Y + Y + + + G++ + I+K S F E +
Sbjct: 87 DVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTA 142
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPS 117
+++ AL+YLH I+HRD+K NI L +D I++ DFG AK+L+ + A+ VGT
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PELL + SD+W+LGC IY++ + P F+A + + KI K + P +
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPAAFF 261
Query: 178 GAFRGLVKSML 188
R LV+ +L
Sbjct: 262 PKARDLVEKLL 272
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 11/227 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++L+ ++ +P I++ + + ++G Y ++ GG++ + I + K FSE + +
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKG-YFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIR 156
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L + Y+H N I+HRD+K N+ L +KD +IR+ DFGL+ + +GT
Sbjct: 157 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 216
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ K+ K + P
Sbjct: 217 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 275
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSP 221
K S + + L++ ML P +R SA + L H +Q Y K + ++ P
Sbjct: 276 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT-KEQISVDVP 321
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
R+PF+ K S+ + +C ++ + GG++ + + ++FSE++ + +++ ALD
Sbjct: 209 RHPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALD 265
Query: 68 YLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPELLA 125
YLH+ ++++RD+K N+ L KD I++ DFGL K D + GTP Y+ PE+L
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
D YG D W LG +YEM + F D + L I + P + L+
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLS 384
Query: 186 SMLRKNPELR-----PSAAELLRH 204
+L+K+P+ R A E+++H
Sbjct: 385 GLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 11/227 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++L+ ++ +P I++ + + ++G Y ++ GG++ + I + K FSE + +
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKG-YFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIR 157
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L + Y+H N I+HRD+K N+ L +KD +IR+ DFGL+ + +GT
Sbjct: 158 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 217
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ K+ K + P
Sbjct: 218 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 276
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSP 221
K S + + L++ ML P +R SA + L H +Q Y K + ++ P
Sbjct: 277 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT-KEQISVDVP 322
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
R+PF+ K S+ + +C ++ + GG++ + + ++FSE++ + +++ ALD
Sbjct: 206 RHPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALD 262
Query: 68 YLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPELLA 125
YLH+ ++++RD+K N+ L KD I++ DFGL K D + GTP Y+ PE+L
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
D YG D W LG +YEM + F D + L I + P + L+
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLS 381
Query: 186 SMLRKNPELR-----PSAAELLRH 204
+L+K+P+ R A E+++H
Sbjct: 382 GLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 10/216 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++L+ ++ +P I++ + + ++G Y ++ GG++ + I + K FSE + +
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKG-YFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIR 139
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L + Y+H N I+HRD+K N+ L +KD +IR+ DFGL+ + +GT
Sbjct: 140 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 199
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ K+ K + P
Sbjct: 200 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 258
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
K S + + L++ ML P +R SA + L H +Q Y
Sbjct: 259 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 294
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 10/216 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++L+ ++ +P I++ + + ++G Y ++ GG++ + I + K FSE + +
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKG-YFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIR 133
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L + Y+H N I+HRD+K N+ L +KD +IR+ DFGL+ + +GT
Sbjct: 134 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ K+ K + P
Sbjct: 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
K S + + L++ ML P +R SA + L H +Q Y
Sbjct: 253 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 10/214 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 130
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 189
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE L Y +SDIWS+G + EM + P A+ ++ + P P SG
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSG 249
Query: 179 A----FRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
F+ V L KNP R +L+ H ++
Sbjct: 250 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
R+PF+ K S+ + +C ++ + GG++ + + ++FSE++ + +++ ALD
Sbjct: 68 RHPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALD 124
Query: 68 YLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPELLA 125
YLH+ ++++RD+K N+ L KD I++ DFGL K D GTP Y+ PE+L
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
D YG D W LG +YEM + F D + L I + P + L+
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLS 243
Query: 186 SMLRKNPELR-----PSAAELLRH 204
+L+K+P+ R A E+++H
Sbjct: 244 GLLKKDPKQRLGGGSEDAKEIMQH 267
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
R+PF+ K S+ + +C ++ + GG++ + + ++FSE++ + +++ ALD
Sbjct: 66 RHPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALD 122
Query: 68 YLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPELLA 125
YLH+ ++++RD+K N+ L KD I++ DFGL K D GTP Y+ PE+L
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
D YG D W LG +YEM + F D + L I + P + L+
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLS 241
Query: 186 SMLRKNPELR-----PSAAELLRH 204
+L+K+P+ R A E+++H
Sbjct: 242 GLLKKDPKQRLGGGSEDAKEIMQH 265
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 6/210 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 114
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D++A+ VGT SYM
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYM 173
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK-YSG 178
PE L Y +SDIWS+G + EM + + L++ I LP+ +S
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSL 233
Query: 179 AFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
F+ V L KNP R +L+ H ++
Sbjct: 234 EFQDFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
R+PF+ K S+ + +C ++ + GG++ + + ++FSE++ + +++ ALD
Sbjct: 67 RHPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALD 123
Query: 68 YLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPELLA 125
YLH+ ++++RD+K N+ L KD I++ DFGL K D GTP Y+ PE+L
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
D YG D W LG +YEM + F D + L I + P + L+
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLS 242
Query: 186 SMLRKNPELR-----PSAAELLRH 204
+L+K+P+ R A E+++H
Sbjct: 243 GLLKKDPKQRLGGGSEDAKEIMQH 266
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G++ + ++K + F E++ ++
Sbjct: 64 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYIT 120
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 179
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 238
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEH 262
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+P I++ KD++ E + ++ + G++ + + + + SE++ K + LL +
Sbjct: 83 HPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICA 139
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLA--- 125
LH +I+HRD+K NI L D +I+L DFG + L + SV GTPSY+ PE++
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 126 --DIP-YGSKSDIWSLGCCIYEMTSLKPAF---KAFDMQALINKINKSIVAPLPTKYSGA 179
+ P YG + D+WS G +Y + + P F K M +I N +P YS
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 180 FRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+ LV L P+ R +A E L H Q YV++
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE 293
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 85 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 141
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 200
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 259
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 260 RDLISRLLKHNPSQRPMLREVLEH 283
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 76 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 132
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 191
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 250
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 251 RDLISRLLKHNPSQRPMLREVLEH 274
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 27 CIIIG--FCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNI 84
C+ I FC+ G + + I+K + + + Q+ +DY+H+ +++RD+K SNI
Sbjct: 94 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNI 153
Query: 85 FLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYE 144
FL + +++GDFGL L +D GT YM PE ++ YG + D+++LG + E
Sbjct: 154 FLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLR 203
+ L AF+ + I++ + K + L++ +L K PE RP+ +E+LR
Sbjct: 214 L--LHVCDTAFETSKFFTDLRDGIISDIFDKKE---KTLLQKLLSKKPEDRPNTSEILR 267
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 16/220 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 111
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ-------ALINKINKSIVAPL 172
PE L Y +SDIWS+G + EM + D + A+ ++ + P
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP 230
Query: 173 PTKYSGA----FRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
P SG F+ V L KNP R +L+ H ++
Sbjct: 231 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G++ + ++K + F E++ ++
Sbjct: 64 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYIT 120
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + GT Y+
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLP 179
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 238
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEH 262
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 12/214 (5%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+P I++ KD++ E + ++ + G++ + + + + SE++ K + LL +
Sbjct: 83 HPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICA 139
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLA--- 125
LH +I+HRD+K NI L D +I+L DFG + L + V GTPSY+ PE++
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 199
Query: 126 --DIP-YGSKSDIWSLGCCIYEMTSLKPAF---KAFDMQALINKINKSIVAPLPTKYSGA 179
+ P YG + D+WS G +Y + + P F K M +I N +P YS
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 180 FRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+ LV L P+ R +A E L H Q YV++
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE 293
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV-QLLMALDYLH 70
IV+Y S+ E G ++ I + GG ++ ++ L E+ + Q+L L YLH
Sbjct: 81 IVQYLGSFSENG-FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 71 ANHILHRDVKCSNIFL-TKDQDIRLGDFGLAKILTS-DDLASSVVGTPSYMCPELLADIP 128
N I+HRD+K N+ + T +++ DFG +K L + + GT YM PE++ P
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 129 --YGSKSDIWSLGCCIYEMTSLKPAFKAF-DMQALINKINKSIVAP-LPTKYSGAFRGLV 184
YG +DIWSLGC I EM + KP F + QA + K+ V P +P S + +
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFI 259
Query: 185 KSMLRKNPELRPSAAELL 202
+P+ R A +LL
Sbjct: 260 LKCFEPDPDKRACANDLL 277
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 85 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 141
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS---DDLASSVVGTPS 117
+L AL Y H+ ++HRD+K N+ L ++++ DFG + S DDL GT
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLD 197
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVT 256
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 257 EGARDLISRLLKHNPSQRPMLREVLEH 283
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 64 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 120
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 179
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE + + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 238
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 239 RDLISRLLKHNPSQRPXLREVLEH 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 62 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 118
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 177
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 236
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 64 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 120
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 179
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 238
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEH 262
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV-QLLMALDYLH 70
IV+Y S+ E G ++ I + GG ++ ++ L E+ + Q+L L YLH
Sbjct: 67 IVQYLGSFSENG-FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 71 ANHILHRDVKCSNIFL-TKDQDIRLGDFGLAKILTS-DDLASSVVGTPSYMCPELLADIP 128
N I+HRD+K N+ + T +++ DFG +K L + + GT YM PE++ P
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 129 --YGSKSDIWSLGCCIYEMTSLKPAFKAF-DMQALINKINKSIVAP-LPTKYSGAFRGLV 184
YG +DIWSLGC I EM + KP F + QA + K+ V P +P S + +
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFI 245
Query: 185 KSMLRKNPELRPSAAELL 202
+P+ R A +LL
Sbjct: 246 LKCFEPDPDKRACANDLL 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + + GT Y+
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+++P IV DS E G + ++ GG++ E I + +SE + Q+L ++
Sbjct: 60 LKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESV 116
Query: 67 DYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPE 122
++ H N I+HRD+K N+ L +K ++L DFGLA + D A GTP Y+ PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PYG D+W+ G +Y + P F D L +I +P +
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ L+ ML NP R +A+E L+H
Sbjct: 237 AKDLINKMLTINPAKRITASEALKH 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 62 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 118
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLP 177
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 236
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 58 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 114
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 115 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 173
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 232
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 233 RDLISRLLKHNPSQRPMLREVLEH 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 64 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 120
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + + GT Y+
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLP 179
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 238
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEH 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 60 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 116
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + ++ GT Y+
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDYLP 175
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 234
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 60 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 116
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + + GT Y+
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLP 175
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 234
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEH 258
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 130/286 (45%), Gaps = 36/286 (12%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
++P I+ KD + + G YV ++ +GG++ + I + K FSE + L + ++
Sbjct: 74 QHPNIITLKDVY-DDGKYVYVVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVE 130
Query: 68 YLHANHILHRDVKCSNIFLTKD----QDIRLGDFGLAKILTSDD-LASSVVGTPSYMCPE 122
YLHA ++HRD+K SNI + + IR+ DFG AK L +++ L + T +++ PE
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE 190
Query: 123 LLADIPYGSKSDIWSLGCCIYEM-TSLKPAFKAFD-----MQALINKINKSIVAPLPTKY 176
+L Y + DIWSLG +Y M T P D + A I S+
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPRRNSLSHWPESNYAR 236
S + LV ML +P R +AA +LRH P+++ HW + +
Sbjct: 251 SDTAKDLVSKMLHVDPHQRLTAALVLRH----PWIV---------------HWDQLPQYQ 291
Query: 237 RTRFSEPDNVPISSYREKQYSFSNNRNLNPSISGTEQDSLCSTKGI 282
R P V YS + NRN +P + + +L +GI
Sbjct: 292 LNRQDAPHLV--KGAMAATYS-ALNRNQSPVLEPVGRSTLAQRRGI 334
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 62 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 118
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 177
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 236
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMA-EAIKKANSK-LFSEEKLCKWLVQLLM 64
+++P IVE +++ G + ++ F +G D+ E +K+A++ ++SE ++ Q+L
Sbjct: 85 LKHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDL-ASSVVGTPSYMC 120
AL Y H N+I+HRDVK + L ++ ++LG FG+A L L A VGTP +M
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG-- 178
PE++ PYG D+W G ++ + S F + L I K P ++S
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHIS 262
Query: 179 -AFRGLVKSMLRKNPELRPSAAELLRHVHLQP---YVLKVHL 216
+ + LV+ ML +P R + E L H L+ Y K+HL
Sbjct: 263 ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHL 304
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 63 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 119
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 178
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 237
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 238 RDLISRLLKHNPSQRPMLREVLEH 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + + GT Y+
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 56 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 112
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 113 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 171
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 230
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 231 RDLISRLLKHNPSQRPMLREVLEH 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 60 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 116
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y+
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-RTTLSGTLDYLP 175
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 234
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + + GT Y+
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 61 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 117
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + GT Y+
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLP 176
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 235
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 236 RDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 11/227 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++L+ ++ +P I + + + ++G Y ++ GG++ + I + K FSE + +
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKG-YFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIR 133
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L + Y H N I+HRD+K N+ L +KD +IR+ DFGL+ + +GT
Sbjct: 134 QVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY 193
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ K+ K + P
Sbjct: 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSP 221
K S + + L++ L P R SA + L H +Q Y K + ++ P
Sbjct: 253 KVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYT-KEQISVDVP 298
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMA-EAIKKANSK-LFSEEKLCKWLVQLLM 64
+++P IVE +++ G + ++ F +G D+ E +K+A++ ++SE ++ Q+L
Sbjct: 83 LKHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDL-ASSVVGTPSYMC 120
AL Y H N+I+HRDVK + L ++ ++LG FG+A L L A VGTP +M
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG-- 178
PE++ PYG D+W G ++ + S F + L I K P ++S
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHIS 260
Query: 179 -AFRGLVKSMLRKNPELRPSAAELLRHVHLQP---YVLKVHL 216
+ + LV+ ML +P R + E L H L+ Y K+HL
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHL 302
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+++P IV DS E G + ++ GG++ E I + +SE + Q+L ++
Sbjct: 60 LKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESV 116
Query: 67 DYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPE 122
++ H N I+HRD+K N+ L +K ++L DFGLA + D A GTP Y+ PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PYG D+W+ G +Y + P F D L +I +P +
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ L+ ML NP R +A+E L+H
Sbjct: 237 AKDLINKMLTINPAKRITASEALKH 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + + GT Y+
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 61 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 117
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ +FG + + +++ GT Y+
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLP 176
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 235
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 236 RDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 62 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 118
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS---DDLASSVVGTPS 117
+L AL Y H+ ++HRD+K N+ L ++++ DFG + S DDL GT
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLD 174
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVT 233
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + +++ GT Y+
Sbjct: 116 ELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 62 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 118
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ +FG + + +++ GT Y+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLP 177
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 236
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 6/170 (3%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
++ F GGD+ I+K S+ F E + + +++ AL +LH I++RD+K N+ L
Sbjct: 101 FVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD 158
Query: 88 KDQDIRLGDFGLAKILTSDDLASSVV-GTPSYMCPELLADIPYGSKSDIWSLGCCIYEMT 146
+ +L DFG+ K + + ++ GTP Y+ PE+L ++ YG D W++G +YEM
Sbjct: 159 HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218
Query: 147 SLKPAFKAFDMQALINKI-NKSIVAPLPTKYSGAFRGLVKSMLRKNPELR 195
F+A + L I N +V PT G++KS + KNP +R
Sbjct: 219 CGHAPFEAENEDDLFEAILNDEVV--YPTWLHEDATGILKSFMTKNPTMR 266
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +I+ + GG++ +++ SE + + + Q+L + YLH N+I+H D+K NI
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163
Query: 86 LTKDQ---DIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCI 142
L+ DI++ DFG+++ + ++GTP Y+ PE+L P + +D+W++G
Sbjct: 164 LSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
Query: 143 YEMTSLKPAFKAFDMQAL---INKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
Y + + F D Q I+++N + S ++S+L KNPE RP+A
Sbjct: 224 YMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
Query: 200 ELLRHVHLQPY 210
L H LQ +
Sbjct: 284 ICLSHSWLQQW 294
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++S + +PFI+ ++ + + +I+ + EGG++ ++K S+ F + ++
Sbjct: 59 MLSIVTHPFIIRMWGTF-QDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEV 115
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+AL+YLH+ I++RD+K NI L K+ I++ DFG AK + D+ + GTP Y+ PE
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP--DVTYXLCGTPDYIAPE 173
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTS-LKPAFKAFDMQALINKINKSIVAP 171
+++ PY D WS G IYEM + P + + M+ +N + P
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++ KI++ IV +D + E ++ +++ GG++ + I ++E+ +
Sbjct: 71 IAVLRKIKHENIVALEDIY-ESPNHLYLVMQLVSGGELFDRI--VEKGFYTEKDASTLIR 127
Query: 61 QLLMALDYLHANHILHRDVKCSNI-FLTKDQD--IRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L A+ YLH I+HRD+K N+ + ++D++ I + DFGL+K+ D+ S+ GTP
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPG 187
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS---IVAPLPT 174
Y+ PE+LA PY D WS+G Y + P F + L +I K+ +P
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWD 247
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPRRNSLSHWPESNY 234
S + + +++++ K+P R + + RH P++ LN S+S N+
Sbjct: 248 DISDSAKDFIRNLMEKDPNKRYTCEQAARH----PWIAG-DTALNKNIHESVSAQIRKNF 302
Query: 235 AR 236
A+
Sbjct: 303 AK 304
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 59 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 115
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + GT Y+
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLP 174
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 233
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 62 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT 118
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L ++++ DFG + + + GT Y+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLP 177
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE KP F+A Q +I++ + P +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGA 236
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ NP RP E+L H
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 10/216 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+EL+ K+ +P I++ + +E I+ GG++ + I K K FSE + +
Sbjct: 72 VELLKKLDHPNIMKLFE-ILEDSSSFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIK 128
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+ + Y+H ++I+HRD+K NI L KD DI++ DFGL+ + +GT
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVA---PLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ ++ A P
Sbjct: 189 YIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
S + L++ ML +P LR +A + L H +Q Y
Sbjct: 248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+P I++ KD++ E + ++ + G++ + + + + SE++ K + LL +
Sbjct: 70 HPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICA 126
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLA--- 125
LH +I+HRD+K NI L D +I+L DFG + L + V GTPSY+ PE++
Sbjct: 127 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 186
Query: 126 --DIP-YGSKSDIWSLGCCIYEMTSLKPAF---KAFDMQALINKINKSIVAPLPTKYSGA 179
+ P YG + D+WS G +Y + + P F K M +I N +P YS
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 246
Query: 180 FRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
+ LV L P+ R +A E L H Q Y
Sbjct: 247 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 277
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 10/216 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+EL+ K+ +P I++ + +E I+ GG++ + I K K FSE + +
Sbjct: 72 VELLKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIK 128
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+ + Y+H ++I+HRD+K NI L KD DI++ DFGL+ + +GT
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVA---PLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ ++ A P
Sbjct: 189 YIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
S + L++ ML +P LR +A + L H +Q Y
Sbjct: 248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK--LFSEEKLCKWL 59
++++K+ + FIV ++ E +C+++ GGD+ I + F E + +
Sbjct: 237 KILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSY 118
Q++ L++LH +I++RD+K N+ L D ++R+ D GLA L + + GTP +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTK 175
M PELL Y D ++LG +YEM + + F+A + ++ + ++ P K
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 176 YSGAFRGLVKSMLRKNPELR 195
+S A + +++L+K+PE R
Sbjct: 416 FSPASKDFCEALLQKDPEKR 435
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 10/216 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+EL+ K+ +P I++ + +E I+ GG++ + I K K FSE + +
Sbjct: 72 VELLKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIK 128
Query: 61 QLLMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+ + Y+H ++I+HRD+K NI L KD DI++ DFGL+ + +GT
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVA---PLPT 174
Y+ PE+L Y K D+WS G +Y + S P F + ++ ++ A P
Sbjct: 189 YIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
S + L++ ML +P LR +A + L H +Q Y
Sbjct: 248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK--LFSEEKLCKWL 59
++++K+ + FIV ++ E +C+++ GGD+ I + F E + +
Sbjct: 237 KILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSY 118
Q++ L++LH +I++RD+K N+ L D ++R+ D GLA L + + GTP +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTK 175
M PELL Y D ++LG +YEM + + F+A + ++ + ++ P K
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 176 YSGAFRGLVKSMLRKNPELR 195
+S A + +++L+K+PE R
Sbjct: 416 FSPASKDFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK--LFSEEKLCKWL 59
++++K+ + FIV ++ E +C+++ GGD+ I + F E + +
Sbjct: 237 KILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSY 118
Q++ L++LH +I++RD+K N+ L D ++R+ D GLA L + + GTP +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTK 175
M PELL Y D ++LG +YEM + + F+A + ++ + ++ P K
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 176 YSGAFRGLVKSMLRKNPELR 195
+S A + +++L+K+PE R
Sbjct: 416 FSPASKDFCEALLQKDPEKR 435
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+P I+ DS+ E ++ ++ G++ + + + + SE++ + LL A+ +
Sbjct: 159 HPHIITLIDSY-ESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSF 215
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELL---- 124
LHAN+I+HRD+K NI L + IRL DFG + L + + GTP Y+ PE+L
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM 275
Query: 125 --ADIPYGSKSDIWSLGCCIYEMTSLKPAF---KAFDMQALINKINKSIVAPLPTKYSGA 179
YG + D+W+ G ++ + + P F + M +I + +P S
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSST 335
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ L+ +L+ +PE R +A + L+H
Sbjct: 336 VKDLISRLLQVDPEARLTAEQALQH 360
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK--LFSEEKLCKWL 59
++++K+ + FIV ++ E +C+++ GGD+ I + F E + +
Sbjct: 237 KILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSY 118
Q++ L++LH +I++RD+K N+ L D ++R+ D GLA L + + GTP +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTK 175
M PELL Y D ++LG +YEM + + F+A + ++ + ++ P K
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 176 YSGAFRGLVKSMLRKNPELR 195
+S A + +++L+K+PE R
Sbjct: 416 FSPASKDFCEALLQKDPEKR 435
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 173
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 232
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMT 146
PE L Y +SDIWS+G + EM
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMA 259
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +K+A K EE L K +
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSI 121
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
+L L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 180
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMT 146
PE L Y +SDIWS+G + E+
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELA 207
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 6 KIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMA 65
K+++P IV DS ++ + ++ GG++ E I + +SE + Q+L +
Sbjct: 84 KLQHPNIVRLHDS-IQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILES 140
Query: 66 LDYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+ Y H+N I+HR++K N+ L K ++L DFGLA + + GTP Y+ PE
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 200
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PY DIW+ G +Y + P F D L +I +P +
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260
Query: 180 FRGLVKSMLRKNPELRPSAAELLR 203
+ L+ SML NP+ R +A + L+
Sbjct: 261 AKSLIDSMLTVNPKKRITADQALK 284
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+++P IV DS E G + ++ GG++ E I + +SE + Q+L ++
Sbjct: 87 LKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDI--VAREYYSEADASHCIHQILESV 143
Query: 67 DYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPE 122
+++H + I+HRD+K N+ L K ++L DFGLA + + A GTP Y+ PE
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE 203
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PYG DIW+ G +Y + P F D L +I +P +
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPE 263
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ L+ ML NP R +A + L+H
Sbjct: 264 AKNLINQMLTINPAKRITADQALKH 288
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 90/201 (44%), Gaps = 32/201 (15%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D+ + KA E + + Q L LD+LHAN I+HRD+K NI +T ++L D
Sbjct: 104 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 163
Query: 97 FGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAF---- 152
FGLA+I + + VV T Y PE+L Y + D+WS+GC EM KP F
Sbjct: 164 FGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 223
Query: 153 ------KAFDMQALINKINKSIVAPLPTKYSGAF--RG-----------------LVKSM 187
K FD+ L + + LP GAF RG L+ M
Sbjct: 224 EADQLGKIFDLIGLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLLLEM 280
Query: 188 LRKNPELRPSAAELLRHVHLQ 208
L NP R SA L+H +L
Sbjct: 281 LTFNPHKRISAFRALQHSYLH 301
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 90/201 (44%), Gaps = 32/201 (15%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D+ + KA E + + Q L LD+LHAN I+HRD+K NI +T ++L D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 97 FGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAF---- 152
FGLA+I + + VV T Y PE+L Y + D+WS+GC EM KP F
Sbjct: 156 FGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 153 ------KAFDMQALINKINKSIVAPLPTKYSGAF--RG-----------------LVKSM 187
K FD+ L + + LP GAF RG L+ M
Sbjct: 216 EADQLGKIFDLIGLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLLLEM 272
Query: 188 LRKNPELRPSAAELLRHVHLQ 208
L NP R SA L+H +L
Sbjct: 273 LTFNPHKRISAFRALQHSYLH 293
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 36/286 (12%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
++P I+ KD + + G YV ++ +GG++ + I + K FSE + L + ++
Sbjct: 74 QHPNIITLKDVY-DDGKYVYVVTELXKGGELLDKILR--QKFFSEREASAVLFTITKTVE 130
Query: 68 YLHANHILHRDVKCSNIFLTKD----QDIRLGDFGLAKILTSDD-LASSVVGTPSYMCPE 122
YLHA ++HRD+K SNI + + IR+ DFG AK L +++ L + T +++ PE
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE 190
Query: 123 LLADIPYGSKSDIWSLGCCIY-EMTSLKPAFKAFD-----MQALINKINKSIVAPLPTKY 176
+L Y + DIWSLG +Y +T P D + A I S+
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPRRNSLSHWPESNYAR 236
S + LV L +P R +AA +LRH P+++ HW + +
Sbjct: 251 SDTAKDLVSKXLHVDPHQRLTAALVLRH----PWIV---------------HWDQLPQYQ 291
Query: 237 RTRFSEPDNVPISSYREKQYSFSNNRNLNPSISGTEQDSLCSTKGI 282
R P V YS + NRN +P + + +L +GI
Sbjct: 292 LNRQDAPHLV--KGAXAATYS-ALNRNQSPVLEPVGRSTLAQRRGI 334
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 6 KIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMA 65
K+++P IV DS ++ + ++ GG++ E I + +SE + Q+L +
Sbjct: 61 KLQHPNIVRLHDS-IQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILES 117
Query: 66 LDYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+ Y H+N I+HR++K N+ L K ++L DFGLA + + GTP Y+ PE
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 177
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PY DIW+ G +Y + P F D L +I +P +
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 180 FRGLVKSMLRKNPELRPSAAELLR 203
+ L+ SML NP+ R +A + L+
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALK 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 10/216 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P I++ D ++ + ++I + G ++ + I + + SE++ ++ Q++ A+
Sbjct: 61 LRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAV 116
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD 126
+Y H + I+HRD+K N+ L + ++++ DFGL+ I+T + + G+P+Y PE+++
Sbjct: 117 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 176
Query: 127 IPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
Y G + D+WS G +Y M + F + L I+ V LP S GL+K
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-VYTLPKFLSPGAAGLIK 235
Query: 186 SMLRKNPELRPSAAELLR----HVHLQPYVLKVHLK 217
ML NP R S E+++ V L Y+L LK
Sbjct: 236 RMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDLK 271
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 6 KIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMA 65
K+++P IV DS ++ + ++ GG++ E I + +SE + Q+L +
Sbjct: 60 KLQHPNIVRLHDS-IQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILES 116
Query: 66 LDYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+ Y H+N I+HR++K N+ L K ++L DFGLA + + GTP Y+ PE
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 176
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PY DIW+ G +Y + P F D L +I +P +
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 236
Query: 180 FRGLVKSMLRKNPELRPSAAELLR 203
+ L+ SML NP+ R +A + L+
Sbjct: 237 AKSLIDSMLTVNPKKRITADQALK 260
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D+ + KA E + + Q L LD+LHAN I+HRD+K NI +T ++L D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 97 FGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAF---- 152
FGLA+I + VV T Y PE+L Y + D+WS+GC EM KP F
Sbjct: 156 FGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 153 ------KAFDMQALINKINKSIVAPLPTKYSGAF--RG-----------------LVKSM 187
K FD+ L + + LP GAF RG L+ M
Sbjct: 216 EADQLGKIFDLIGLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLLLEM 272
Query: 188 LRKNPELRPSAAELLRHVHLQ 208
L NP R SA L+H +L
Sbjct: 273 LTFNPHKRISAFRALQHSYLH 293
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 63 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYIT 119
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L + ++++ DFG + + +++ GT Y+
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 178
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE P F+A Q +I++ + P +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR-VEFTFPDFVTEGA 237
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ N R + AE+L H
Sbjct: 238 RDLISRLLKHNASQRLTLAEVLEH 261
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 6/198 (3%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P I++ D ++ + ++I + G ++ + I + + SE++ ++ Q++ A+
Sbjct: 71 LRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAV 126
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD 126
+Y H + I+HRD+K N+ L + ++++ DFGL+ I+T + + G+P+Y PE+++
Sbjct: 127 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 186
Query: 127 IPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
Y G + D+WS G +Y M + F + L I+ V LP S GL+K
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-VYTLPKFLSPGAAGLIK 245
Query: 186 SMLRKNPELRPSAAELLR 203
ML NP R S E+++
Sbjct: 246 RMLIVNPLNRISIHEIMQ 263
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 6 KIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMA 65
K+++P IV DS ++ + ++ GG++ E I + +SE + Q+L +
Sbjct: 61 KLQHPNIVRLHDS-IQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILES 117
Query: 66 LDYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+ Y H+N I+HR++K N+ L K ++L DFGLA + + GTP Y+ PE
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 177
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PY DIW+ G +Y + P F D L +I +P +
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 180 FRGLVKSMLRKNPELRPSAAELLR 203
+ L+ SML NP+ R +A + L+
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALK 261
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 6/198 (3%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P I++ D ++ + ++I + G ++ + I + + SE++ ++ Q++ A+
Sbjct: 70 LRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAV 125
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD 126
+Y H + I+HRD+K N+ L + ++++ DFGL+ I+T + + G+P+Y PE+++
Sbjct: 126 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 185
Query: 127 IPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
Y G + D+WS G +Y M + F + L I+ V LP S GL+K
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-VYTLPKFLSPGAAGLIK 244
Query: 186 SMLRKNPELRPSAAELLR 203
ML NP R S E+++
Sbjct: 245 RMLIVNPLNRISIHEIMQ 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 138
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 197
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMT 146
PE L Y +SDIWS+G + EM
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMA 224
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 6/198 (3%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P I++ D ++ + ++I + G ++ + I + + SE++ ++ Q++ A+
Sbjct: 65 LRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAV 120
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD 126
+Y H + I+HRD+K N+ L + ++++ DFGL+ I+T + + G+P+Y PE+++
Sbjct: 121 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 180
Query: 127 IPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
Y G + D+WS G +Y M + F + L I+ V LP S GL+K
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-VYTLPKFLSPGAAGLIK 239
Query: 186 SMLRKNPELRPSAAELLR 203
ML NP R S E+++
Sbjct: 240 RMLIVNPLNRISIHEIMQ 257
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D+ + KA E + + Q L LD+LHAN I+HRD+K NI +T ++L D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 97 FGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAF---- 152
FGLA+I + VV T Y PE+L Y + D+WS+GC EM KP F
Sbjct: 156 FGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 153 ------KAFDMQALINKINKSIVAPLPTKYSGAF--RG-----------------LVKSM 187
K FD+ L + + LP GAF RG L+ M
Sbjct: 216 EADQLGKIFDLIGLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLLLEM 272
Query: 188 LRKNPELRPSAAELLRHVHLQ 208
L NP R SA L+H +L
Sbjct: 273 LTFNPHKRISAFRALQHSYLH 293
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 4 ISKIRNPFIVEYKDSWVERG-----------CYVCIIIGFCEGGDMAEAIKKANSKLFSE 52
++K+ +P IV Y ++W+E+ Y+ I + C ++ + + + E
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 53 EKLC-KWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASS 111
+C +Q+ A+++LH+ ++HRD+K SNIF T D +++GDFGL + D+ +
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 112 V-------------VGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ 158
V VGT YM PE + Y K DI+SLG ++E+ L P +
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL--LYPFSTQMERV 234
Query: 159 ALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ + PL T+ +V+ ML +P RP A ++
Sbjct: 235 RTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINII 278
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + V +I+ + G + ++K + F E++ ++
Sbjct: 63 VEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYIT 119
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H+ ++HRD+K N+ L + ++++ DFG + + ++ GT Y+
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLDYLP 178
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+WSLG YE P F+A Q +I++ + P +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR-VEFTFPDFVTEGA 237
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
R L+ +L+ N R + AE+L H
Sbjct: 238 RDLISRLLKHNASQRLTLAEVLEH 261
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 106/198 (53%), Gaps = 6/198 (3%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P I++ D + + ++I + GG++ + I K +E++ ++ Q++ A+
Sbjct: 66 LRHPHIIKLYDV-ITTPTDIVMVIEYA-GGELFDYI--VEKKRMTEDEGRRFFQQIICAI 121
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD 126
+Y H + I+HRD+K N+ L + ++++ DFGL+ I+T + + G+P+Y PE++
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING 181
Query: 127 IPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
Y G + D+WS G +Y M + F + L K+N S V +P S + L++
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN-SCVYVMPDFLSPGAQSLIR 240
Query: 186 SMLRKNPELRPSAAELLR 203
M+ +P R + E+ R
Sbjct: 241 RMIVADPMQRITIQEIRR 258
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 111
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMT 146
PE L Y +SDIWS+G + EM
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMA 197
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
++ + GGD+ I++ F E + + ++ + L +LH I++RD+K N+ L
Sbjct: 97 FVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 88 KDQDIRLGDFGLAKILTSDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMT 146
+ I++ DFG+ K D + + GTP Y+ PE++A PYG D W+ G +YEM
Sbjct: 155 SEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214
Query: 147 SLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELR 195
+ +P F D L I + V+ P S + K ++ K+P R
Sbjct: 215 AGQPPFDGEDEDELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 10/205 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+++P IV DS E G + +I GG++ E I + +SE + Q+L A+
Sbjct: 78 LKHPNIVRLHDSISEEGHHY-LIFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAV 134
Query: 67 DYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPE 122
+ H ++HRD+K N+ L K ++L DFGLA + + A GTP Y+ PE
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PYG D+W+ G +Y + P F D L +I +P +
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 254
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ L+ ML NP R +AAE L+H
Sbjct: 255 AKDLINKMLTINPSKRITAAEALKH 279
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 10/210 (4%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ ++ KI++ IV +D + E + +++ GG++ + I + +++E+ +
Sbjct: 57 IAVLKKIKHENIVTLEDIY-ESTTHYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQ 113
Query: 61 QLLMALDYLHANHILHRDVKCSNI-FLTKDQD--IRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L A+ YLH N I+HRD+K N+ +LT +++ I + DFGL+K + + + S+ GTP
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPG 172
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPT 174
Y+ PE+LA PY D WS+G Y + P F L KI + +P
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWD 232
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + + + +L K+P R + + L H
Sbjct: 233 DISESAKDFICHLLEKDPNERYTCEKALSH 262
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 111
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMT 146
PE L Y +SDIWS+G + EM
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMA 197
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 115/234 (49%), Gaps = 40/234 (17%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYV------------CIIIGFCEGGDMAEAIKKANSKLF 50
L++ + + ++V Y +W+ER +V I + +CE G + + I N
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---L 111
Query: 51 SEEKLCKWLV--QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK------- 101
++++ W + Q+L AL Y+H+ I+HRD+K NIF+ + +++++GDFGLAK
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 102 ILTSD--------DLASSVVGTPSYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLKPAF 152
IL D D +S +GT Y+ E+L Y K D++SLG +EM + P
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM--IYPFS 229
Query: 153 KAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPELRPSAAELL 202
+ ++ K+ +S+ P + + +++ ++ +P RP A LL
Sbjct: 230 TGMERVNILKKL-RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D+ + K E + + QLL LD+LH++ ++HRD+K NI +T I+L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 97 FGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFD 156
FGLA+I + +SVV T Y PE+L Y + D+WS+GC EM KP F+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 157 MQALINKINKSIVAP 171
+ KI I P
Sbjct: 224 DVDQLGKILDVIGLP 238
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+ + F+V ++ + +C+++ GGD+ I F E + + +
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE 294
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCP 121
+ L+ LH I++RD+K NI L IR+ D GLA + VGT YM P
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF- 180
E++ + Y D W+LGC +YEM + + F+ + ++ + +V +P +YS F
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-LVKEVPEEYSERFS 413
Query: 181 ---RGLVKSMLRKNPELRPSA-AELLRHVHLQPYVLKVHLK 217
R L +L K+P R R V P K++ K
Sbjct: 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK 454
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D+ + K E + + QLL LD+LH++ ++HRD+K NI +T I+L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 97 FGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFD 156
FGLA+I + +SVV T Y PE+L Y + D+WS+GC EM KP F+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 157 MQALINKINKSIVAP 171
+ KI I P
Sbjct: 224 DVDQLGKILDVIGLP 238
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 111
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMT 146
PE L Y +SDIWS+G + EM
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMA 197
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +P+IV + ++ G + I + +GG + + +KKA E+ L K +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 111
Query: 61 QLLMALDYLHANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
++ L YL H I+HRDVK SNI + +I+L DFG++ L D +A+S VGT SYM
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMT 146
PE L Y +SDIWS+G + EM
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMA 197
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D+ + K E + + QLL LD+LH++ ++HRD+K NI +T I+L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 97 FGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFD 156
FGLA+I + +SVV T Y PE+L Y + D+WS+GC EM KP F+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 157 MQALINKINKSIVAP 171
+ KI I P
Sbjct: 224 DVDQLGKILDVIGLP 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 10/209 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ ++ +P I++ K+ + E + +++ GG++ + I +SE + Q+
Sbjct: 101 VLLRLSHPNIIKLKEIF-ETPTEISLVLELVTGGELFDRI--VEKGYYSERDAADAVKQI 157
Query: 63 LMALDYLHANHILHRDVKCSNIFLTK---DQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
L A+ YLH N I+HRD+K N+ D +++ DFGL+KI+ L +V GTP Y
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYC 217
Query: 120 CPELLADIPYGSKSDIWSLGCCIY-EMTSLKPAFKAFDMQALINKI---NKSIVAPLPTK 175
PE+L YG + D+WS+G Y + +P + Q + +I ++P +
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDE 277
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + LV+ ++ +P+ R + + L+H
Sbjct: 278 VSLNAKDLVRKLIVLDPKKRLTTFQALQH 306
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 36/207 (17%)
Query: 35 GGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRL 94
G D+ +K S+ S+E + + QLL L Y+H+ I+HRD+K SN+ + +D ++R+
Sbjct: 116 GADLNNIVK---SQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 95 GDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFK 153
DFGLA+ +D+ + V T Y PE++ + + Y DIWS+GC + E+ K F
Sbjct: 173 LDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 230
Query: 154 AFDMQALINKINKSI----------------------VAPLPTK-YSGAFRG-------L 183
D + +I + + + P+P K S FRG L
Sbjct: 231 GSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDL 290
Query: 184 VKSMLRKNPELRPSAAELLRHVHLQPY 210
+ ML + + R SAAE L H + Y
Sbjct: 291 LGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+ + F+V ++ + +C+++ GGD+ I F E + + +
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE 294
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCP 121
+ L+ LH I++RD+K NI L IR+ D GLA + VGT YM P
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF- 180
E++ + Y D W+LGC +YEM + + F+ + ++ + +V +P +YS F
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-LVKEVPEEYSERFS 413
Query: 181 ---RGLVKSMLRKNPELRPSA-AELLRHVHLQPYVLKVHLK 217
R L +L K+P R R V P K++ K
Sbjct: 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK 454
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 47/239 (19%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
IR P I + KD + ++ G D+ + +K ++ S + +C +L Q+L L
Sbjct: 110 IRAPTIEQMKDVY---------LVTHLMGADLYKLLK---TQHLSNDHICYFLYQILRGL 157
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMCPE 122
Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y PE
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 123 LLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQALIN 162
++ + +KS DIWS+GC + EM S +P F D+ +IN
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 163 KINKSIVAPLPTK----YSGAF-------RGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
++ + LP K ++ F L+ ML NP R + L H +L+ Y
Sbjct: 278 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 336
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 10/205 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+++P IV DS E G + +I GG++ E I + +SE + Q+L A+
Sbjct: 67 LKHPNIVRLHDSISEEGHHY-LIFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAV 123
Query: 67 DYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPE 122
+ H ++HR++K N+ L K ++L DFGLA + + A GTP Y+ PE
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 183
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L PYG D+W+ G +Y + P F D L +I +P +
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 243
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ L+ ML NP R +AAE L+H
Sbjct: 244 AKDLINKMLTINPSKRITAAEALKH 268
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 10/209 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +IR+P I+ D + E V +I+ GG++ + + + S +E++ ++L Q+
Sbjct: 61 ILREIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQI 117
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSY 118
L + YLH+ I H D+K NI L I+L DFG+A + + + ++ GTP +
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF 177
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQAL---INKINKSIVAPLPTK 175
+ PE++ P G ++D+WS+G Y + S F Q I+ +N +
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 237
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + ++ +L K+P+ R + A+ L H
Sbjct: 238 TSELAKDFIRRLLVKDPKRRMTIAQSLEH 266
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+++ + GGD+ + K +L EE +L ++++A+D +H H +HRD+K NI +
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRL-PEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 88 KDQDIRLGDFG-LAKILTSDDLASSV-VGTPSYMCPELLADIP-----YGSKSDIWSLGC 140
+ IRL DFG K++ + SSV VGTP Y+ PE+L + YG + D WSLG
Sbjct: 210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269
Query: 141 CIYEMTSLKPAFKAFDMQALINKI 164
C+YEM + F A + KI
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKI 293
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
++ + GGD+ I++ F E + ++ + L +L + I++RD+K N+ L
Sbjct: 419 FVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 88 KDQDIRLGDFGLAKILTSDDLASS-VVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMT 146
+ I++ DFG+ K D + + GTP Y+ PE++A PYG D W+ G +YEM
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 147 SLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELR 195
+ + F+ D L I + VA P S + K ++ K+P R
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKR 584
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 35/203 (17%)
Query: 43 KKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKI 102
K S+ S + +C +L Q+L L Y+H+ ++LHRD+K SN+ + D+++ DFGLA+I
Sbjct: 134 KLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI 193
Query: 103 LTSD----DLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA--- 154
+ + V T Y PE++ + +KS DIWS+GC + EM S +P F
Sbjct: 194 ADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 155 ----------------FDMQALINKINKSIVAPLPTKYSGAFR-----------GLVKSM 187
D+ +IN ++ + LP+K A+ L+ M
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRM 313
Query: 188 LRKNPELRPSAAELLRHVHLQPY 210
L NP R + E L H +L+ Y
Sbjct: 314 LTFNPNKRITVEEALAHPYLEQY 336
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 10/209 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +IR+P I+ D + E V +I+ GG++ + + + S +E++ ++L Q+
Sbjct: 68 ILREIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQI 124
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSY 118
L + YLH+ I H D+K NI L I+L DFG+A + + + ++ GTP +
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF 184
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQAL---INKINKSIVAPLPTK 175
+ PE++ P G ++D+WS+G Y + S F Q I+ +N +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 244
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + ++ +L K+P+ R A+ L H
Sbjct: 245 TSELAKDFIRRLLVKDPKRRMXIAQSLEH 273
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GGDM +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 10/209 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +IR+P I+ D + E V +I+ GG++ + + + S +E++ ++L Q+
Sbjct: 82 ILREIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQI 138
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSY 118
L + YLH+ I H D+K NI L I+L DFG+A + + + ++ GTP +
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF 198
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQAL---INKINKSIVAPLPTK 175
+ PE++ P G ++D+WS+G Y + S F Q I+ +N +
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 258
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + ++ +L K+P+ R A+ L H
Sbjct: 259 TSELAKDFIRRLLVKDPKRRMXIAQSLEH 287
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II+ EGG++ I++ + F+E + + + + A+ +LH+++I HRDVK N+
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 86 LT---KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCI 142
T KD ++L DFG AK T + L + TP Y+ PE+L Y D+WSLG +
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
Query: 143 YEMTSLKPAFKAFDMQALINKINKSIVA-------PLPTKYSGAFRGLVKSMLRKNPELR 195
Y + P F + QA+ + + I P ++ S + L++ +L+ +P R
Sbjct: 201 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 260
Query: 196 PSAAELLRHVHLQPYVLKVHLKLNSPR--RNSLSHWPE 231
+ + + H + ++ L++ R + HW E
Sbjct: 261 LTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDE 298
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II+ EGG++ I++ + F+E + + + + A+ +LH+++I HRDVK N+
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 86 LT---KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCI 142
T KD ++L DFG AK T + L + TP Y+ PE+L Y D+WSLG +
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
Query: 143 YEMTSLKPAFKAFDMQALINKINKSIVA-------PLPTKYSGAFRGLVKSMLRKNPELR 195
Y + P F + QA+ + + I P ++ S + L++ +L+ +P R
Sbjct: 220 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 279
Query: 196 PSAAELLRHVHLQPYVLKVHLKLNSPR--RNSLSHWPE 231
+ + + H + ++ L++ R + HW E
Sbjct: 280 LTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDE 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GGDM +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 36/207 (17%)
Query: 35 GGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRL 94
G D+ +K + S+E + + QLL L Y+H+ I+HRD+K SN+ + +D ++R+
Sbjct: 116 GADLNNIVK---CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 95 GDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFK 153
DFGLA+ +D+ + V T Y PE++ + + Y DIWS+GC + E+ K F
Sbjct: 173 LDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 230
Query: 154 AFDMQALINKINKSI----------------------VAPLPTK-YSGAFRG-------L 183
D + +I + + + P+P K S FRG L
Sbjct: 231 GSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDL 290
Query: 184 VKSMLRKNPELRPSAAELLRHVHLQPY 210
+ ML + + R SAAE L H + Y
Sbjct: 291 LGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++++ + +PF+V S+ + + +++ GGD+ +++ + F EE + ++
Sbjct: 66 LQIMQGLEHPFLVNLWYSFQDEED-MFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFIC 122
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L+MALDYL I+HRD+K NI L + + + DF +A +L + +++ GT YM
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMA 182
Query: 121 PELLAD---IPYGSKSDIWSLGCCIYEMTSLKPAF---KAFDMQALINKINKSIVAPLPT 174
PE+ + Y D WSLG YE+ + + + + +++ ++V P+
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT-YPS 241
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYV 211
+S L+K +L NP+ R S L V PY+
Sbjct: 242 AWSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYM 275
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 10 PFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYL 69
P+IV+ +++ + I G AE +KK E L K V ++ AL YL
Sbjct: 84 PYIVQCFGTFITN---TDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL 140
Query: 70 HANH-ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIP 128
H ++HRDVK SNI L + I+L DFG++ L D G +YM PE + D P
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI-DPP 199
Query: 129 ------YGSKSDIWSLGCCIYEMTSLKPAFK--AFDMQALINKINKS-IVAPLPTKYSGA 179
Y ++D+WSLG + E+ + + +K D + L + + + P +SG
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 180 FRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
F+ VK L K+ RP +LL H ++ Y
Sbjct: 260 FQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
++ + GGD+ I++ F E + ++ + L +L + I++RD+K N+ L
Sbjct: 98 FVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 88 KDQDIRLGDFGLAKILTSDDLASSVV-GTPSYMCPELLADIPYGSKSDIWSLGCCIYEMT 146
+ I++ DFG+ K D + + GTP Y+ PE++A PYG D W+ G +YEM
Sbjct: 156 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
Query: 147 SLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELR 195
+ + F+ D L I + VA P S + K ++ K+P R
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 16/244 (6%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ ++ +P I+ D + E V +I+ GG++ + + + S SEE+ ++ Q+
Sbjct: 68 ILRQVLHPNIITLHDVY-ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQI 124
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSY 118
L ++YLH I H D+K NI L I+L DFGLA + ++ GTP +
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEF 184
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPTK 175
+ PE++ P G ++D+WS+G Y + S F Q A I ++ ++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPRRNSLSHWP--ESN 233
S + ++ +L K R + E LRH P++ V + RR S+ + +
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRH----PWITPVDTQQAMVRRESVVNLENFKKQ 300
Query: 234 YARR 237
Y RR
Sbjct: 301 YVRR 304
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 40/234 (17%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYV------------CIIIGFCEGGDMAEAIKKANSKLF 50
L++ + + ++V Y +W+ER +V I + +CE + + I N
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN---L 111
Query: 51 SEEKLCKWLV--QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK------- 101
++++ W + Q+L AL Y+H+ I+HRD+K NIF+ + +++++GDFGLAK
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 102 ILTSD--------DLASSVVGTPSYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLKPAF 152
IL D D +S +GT Y+ E+L Y K D++SLG +EM + P
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM--IYPFS 229
Query: 153 KAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPELRPSAAELL 202
+ ++ K+ +S+ P + + +++ ++ +P RP A LL
Sbjct: 230 TGMERVNILKKL-RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
L+ +++PF+V S+ + + ++ + GG++ +++ + F E + + ++
Sbjct: 92 LLKNVKHPFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEI 148
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMCP 121
AL YLH+ +I++RD+K NI L I L DFGL K + + S+ GTP Y+ P
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKI-NKSIVAPLPTKYSGAF 180
E+L PY D W LG +YEM P F + + + + I NK + L + +
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--QLKPNITNSA 266
Query: 181 RGLVKSMLRKN 191
R L++ +L+K+
Sbjct: 267 RHLLEGLLQKD 277
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 12/191 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + + +K F +KL Q +DYLHA I+HRD+K +NIF
Sbjct: 82 LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 140
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 141 LHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 200
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K + L+ L+K +
Sbjct: 201 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE 260
Query: 195 RPSAAELLRHV 205
RPS +L +
Sbjct: 261 RPSFPRILAEI 271
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFGLAK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 47/239 (19%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
IR P I + KD V I+ E D+ + +K ++ S + +C +L Q+L L
Sbjct: 90 IRAPTIEQMKD--------VYIVQDLMET-DLYKLLK---TQHLSNDHICYFLYQILRGL 137
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMCPE 122
Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y PE
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 123 LLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQALIN 162
++ + +KS DIWS+GC + EM S +P F D+ +IN
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
Query: 163 KINKSIVAPLPTK----YSGAF-------RGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
++ + LP K ++ F L+ ML NP R + L H +L+ Y
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFGLAK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLAGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 36/207 (17%)
Query: 35 GGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRL 94
G D+ +K + S+E + + QLL L Y+H+ I+HRD+K SN+ + +D ++R+
Sbjct: 108 GADLNNIVK---CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 164
Query: 95 GDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFK 153
DFGLA+ +D+ + V T Y PE++ + + Y DIWS+GC + E+ K F
Sbjct: 165 LDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 222
Query: 154 AFDMQALINKINKSI----------------------VAPLPTK-YSGAFRG-------L 183
D + +I + + + P+P K S FRG L
Sbjct: 223 GSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDL 282
Query: 184 VKSMLRKNPELRPSAAELLRHVHLQPY 210
+ ML + + R SAAE L H + Y
Sbjct: 283 LGRMLVLDSDQRVSAAEALAHAYFSQY 309
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 84 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 143 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 202
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 203 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 262
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 263 RNLLKTEPTQRMTITEFMNH----PWIMQ 287
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 86 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 145 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 204
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 205 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 264
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 265 RNLLKTEPTQRMTITEFMNH----PWIMQ 289
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 85 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 144 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 203
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 204 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 263
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 264 RNLLKTEPTQRMTITEFMNH----PWIMQ 288
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 171
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + ++ GTP Y+ PE
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--ATWTLCGTPEYLAPE 229
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 288
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 289 LLRNLLQ 295
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 124 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 243 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 302
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 303 RNLLKTEPTQRMTITEFMNH----PWIMQ 327
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + ++ GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 130 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 189 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 248
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 249 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 308
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 309 RNLLKTEPTQRMTITEFMNH----PWIMQ 333
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 90 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 161 INKINKSIVAPLPTK----YSGAF-------RGLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K ++ F L+ ML NP R + L H +L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 210 Y 210
Y
Sbjct: 316 Y 316
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 90 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 161 INKINKSIVAPLPTK----YSGAF-------RGLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K ++ F L+ ML NP R + L H +L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 210 Y 210
Y
Sbjct: 316 Y 316
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 78 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 196
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 256
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 257 RNLLKTEPTQRMTITEFMNH----PWIMQ 281
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 94 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 161 INKINKSIVAPLPTK----YSGAF-------RGLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K ++ F L+ ML NP R + L H +L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 210 Y 210
Y
Sbjct: 320 Y 320
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 80 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 199 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 258
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 259 RNLLKTEPTQRMTITEFMNH----PWIMQ 283
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLXGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 80 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 199 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 258
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 259 RNLLKTEPTQRMTITEFMNH----PWIMQ 283
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 79 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 138 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 197
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 198 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 257
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 258 RNLLKTEPTQRMTITEFMNH----PWIMQ 282
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 94 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 153 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 212
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 213 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 272
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 273 RNLLKTEPTQRMTITEFMNH----PWIMQ 297
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 136
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + ++ GTP Y+ PE
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPE 194
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 253
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 254 LLRNLLQ 260
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 48 KLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLA-KILTSD 106
K SE++ + L+ ++YLH I+HRD+K SN+ + +D I++ DFG++ + SD
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 107 DLASSVVGTPSYMCPELLAD---IPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINK 163
L S+ VGTP++M PE L++ I G D+W++G +Y + F + L +K
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251
Query: 164 I-NKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLK 213
I ++++ P + + L+ ML KNPE R E + L P+V +
Sbjct: 252 IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPE----IKLHPWVTR 298
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 94 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 210 Y 210
Y
Sbjct: 320 Y 320
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 10 PFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYL 69
PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+++ +YL
Sbjct: 102 PFLVKLEFSFKDNSN-LYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 70 HANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY 129
H+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE++ Y
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGY 216
Query: 130 GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLR 189
D W+LG IYEM + P F A + KI V P+ +S + L++++L+
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKDLLRNLLQ 275
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 12/211 (5%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E++ + +P I+ +++ E + +++ C GG++ E + + ++F E + +
Sbjct: 74 IEIMKSLDHPNIIRLYETF-EDNTDIYLVMELCTGGELFERV--VHKRVFRESDAARIMK 130
Query: 61 QLLMALDYLHANHILHRDVKCSN-IFLTKDQD--IRLGDFGLAKILTSDDLASSVVGTPS 117
+L A+ Y H ++ HRD+K N +FLT D ++L DFGLA + + VGTP
Sbjct: 131 DVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY 190
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK-- 175
Y+ P++L + YG + D WS G +Y + P F A ++ KI + P K
Sbjct: 191 YVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT-FPEKDW 248
Query: 176 --YSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S L++ +L K+P+ R ++ + L H
Sbjct: 249 LNVSPQAESLIRRLLTKSPKQRITSLQALEH 279
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 66 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 122
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 66 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 122
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 12/211 (5%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E++ + +P I+ +++ E + +++ C GG++ E + + ++F E + +
Sbjct: 57 IEIMKSLDHPNIIRLYETF-EDNTDIYLVMELCTGGELFERV--VHKRVFRESDAARIMK 113
Query: 61 QLLMALDYLHANHILHRDVKCSN-IFLTKDQD--IRLGDFGLAKILTSDDLASSVVGTPS 117
+L A+ Y H ++ HRD+K N +FLT D ++L DFGLA + + VGTP
Sbjct: 114 DVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY 173
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK-- 175
Y+ P++L + YG + D WS G +Y + P F A ++ KI + P K
Sbjct: 174 YVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT-FPEKDW 231
Query: 176 --YSGAFRGLVKSMLRKNPELRPSAAELLRH 204
S L++ +L K+P+ R ++ + L H
Sbjct: 232 LNVSPQAESLIRRLLTKSPKQRITSLQALEH 262
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 143
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 201
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 260
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 261 LLRNLLQ 267
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 171
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 229
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 288
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 289 LLRNLLQ 295
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 112/215 (52%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 78 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + + TP Y+ PE+L Y
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDK 196
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 256
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 257 RNLLKTEPTQRMTITEFMNH----PWIMQ 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNI 84
++ +++ + GGD+ + K KL E+ ++ ++++A+D +H H +HRD+K N+
Sbjct: 164 HLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNV 222
Query: 85 FLTKDQDIRLGDFGLAKILTSDDLASS--VVGTPSYMCPELLADIP-----YGSKSDIWS 137
L + IRL DFG + D S VGTP Y+ PE+L + YG + D WS
Sbjct: 223 LLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS 282
Query: 138 LGCCIYEMTSLKPAFKAFDMQALINKI 164
LG C+YEM + F A + KI
Sbjct: 283 LGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ L+ + +P I++ D + ++ Y ++ F EGG++ E I N F E +
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKK-YFYLVTEFYEGGELFEQI--INRHKFDECDAANIMK 153
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQ---DIRLGDFGLAKILTSDDLASSVVGTPS 117
Q+L + YLH ++I+HRD+K NI L +I++ DFGL+ + D +GT
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE+L Y K D+WS G +Y + P F + Q +I K+ K KY
Sbjct: 214 YIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG-------KYY 265
Query: 178 GAF----------RGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
F + L+K ML + R +A E L ++ Y
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 92 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
Query: 210 Y 210
Y
Sbjct: 318 Y 318
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNI 84
++ +++ + GGD+ + K KL E+ ++ ++++A+D +H H +HRD+K N+
Sbjct: 148 HLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNV 206
Query: 85 FLTKDQDIRLGDFGLAKILTSDDLASS--VVGTPSYMCPELLADIP-----YGSKSDIWS 137
L + IRL DFG + D S VGTP Y+ PE+L + YG + D WS
Sbjct: 207 LLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS 266
Query: 138 LGCCIYEMTSLKPAFKAFDMQALINKI 164
LG C+YEM + F A + KI
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 90 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 161 INKINKSIVAPLPTK----YSGAF-------RGLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K ++ F L+ ML NP R + L H +L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 210 Y 210
Y
Sbjct: 316 Y 316
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 88 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAF-------------------KAFDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F + D+ +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 210 Y 210
Y
Sbjct: 314 Y 314
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 81 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 137
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 195
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 254
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 255 LLRNLLQ 261
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 10/205 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+++ IV DS E G + ++ GG++ E I + +SE + Q+L A+
Sbjct: 60 LKHSNIVRLHDSISEEGFHY-LVFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAV 116
Query: 67 DYLHANHILHRDVKCSNIFLT---KDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYMCPE 122
+ H ++HRD+K N+ L K ++L DFGLA + D A GTP Y+ PE
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV---APLPTKYSGA 179
+L YG DIW+ G +Y + P F D L +I +P +
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 180 FRGLVKSMLRKNPELRPSAAELLRH 204
+ L+ ML NP R +A E L+H
Sbjct: 237 AKNLINQMLTINPAKRITAHEALKH 261
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 110 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 155
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Query: 210 Y 210
Y
Sbjct: 336 Y 336
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 94 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 210 Y 210
Y
Sbjct: 320 Y 320
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 106 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 164
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 165 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 225 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 284
Query: 195 RPSAAELLRHVHLQPYVL-KVH 215
RP ++L + L L K+H
Sbjct: 285 RPLFPQILASIELLARSLPKIH 306
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I+ GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 88 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 161 INKINKSIVAPLPTK----YSGAF-------RGLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K ++ F L+ ML NP R + L H +L+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 210 Y 210
Y
Sbjct: 314 Y 314
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 95 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 210 Y 210
Y
Sbjct: 321 Y 321
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 96 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 141
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
Query: 210 Y 210
Y
Sbjct: 322 Y 322
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 87 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 132
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
Query: 210 Y 210
Y
Sbjct: 313 Y 313
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 94 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 210 Y 210
Y
Sbjct: 320 Y 320
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 98 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 143
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 263
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 264 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
Query: 210 Y 210
Y
Sbjct: 324 Y 324
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 90 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 210 Y 210
Y
Sbjct: 316 Y 316
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 105 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 163
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 164 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 223
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 224 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 283
Query: 195 RPSAAELLRHVHLQPYVL-KVH 215
RP ++L + L L K+H
Sbjct: 284 RPLFPQILASIELLARSLPKIH 305
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + + +K F +KL Q +DYLHA I+HRD+K +NIF
Sbjct: 94 LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 86 LTKDQDIRLGDFGLA---KILTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K + L+ L+K +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE 272
Query: 195 RPSAAELLRHV 205
RPS +L +
Sbjct: 273 RPSFPRILAEI 283
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 5 SKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLM 64
+ + +P IV + V G +V I + EGG + + IK+ E++ +L Q L
Sbjct: 105 AGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALE 161
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQD-IRLGDFGLAKILTSDDLASSVV------GTPS 117
L+YLH ILH DVK N+ L+ D L DFG A L D L S++ GT +
Sbjct: 162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI--------- 168
+M PE++ P +K DIWS C + M + + + L KI
Sbjct: 222 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPS 281
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
APL + ++ LRK P R SA EL R V
Sbjct: 282 CAPLTAQA-------IQEGLRKEPVHRASAMELRRKV 311
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + + +K F +KL Q +DYLHA I+HRD+K +NIF
Sbjct: 94 LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 86 LTKDQDIRLGDFGLA---KILTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K + L+ L+K +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE 272
Query: 195 RPSAAELLRHV 205
RPS +L +
Sbjct: 273 RPSFPRILAEI 283
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 5 SKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLM 64
+ + +P IV + V G +V I + EGG + + IK+ E++ +L Q L
Sbjct: 121 AGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALE 177
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQD-IRLGDFGLAKILTSDDLASSVV------GTPS 117
L+YLH ILH DVK N+ L+ D L DFG A L D L S++ GT +
Sbjct: 178 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 237
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI--------- 168
+M PE++ P +K DIWS C + M + + + L KI
Sbjct: 238 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPS 297
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
APL + ++ LRK P R SA EL R V
Sbjct: 298 CAPLTAQA-------IQEGLRKEPVHRASAMELRRKV 327
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F+E + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FAEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 175
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 236 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 262
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 243 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 269
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 243 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 269
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IY+M + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 33/204 (16%)
Query: 38 MAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDF 97
M ++K FSEEK+ + Q+L L Y+H+ ++HRD+K N+ + +D ++++ DF
Sbjct: 129 MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 188
Query: 98 GLAKILTSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFD 156
GLA+ +D + V T Y PE +L+ + Y DIWS+GC + EM + K FK D
Sbjct: 189 GLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246
Query: 157 -------------------MQALINKINKSIVAPLPTKYSGAFR-----------GLVKS 186
+Q L +K KS + LP F L++
Sbjct: 247 YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 306
Query: 187 MLRKNPELRPSAAELLRHVHLQPY 210
ML + + R +AA+ L H +P+
Sbjct: 307 MLELDVDKRLTAAQALTHPFFEPF 330
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 5 SKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLM 64
+ + +P IV + V G +V I + EGG + + IK+ E++ +L Q L
Sbjct: 119 AGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALE 175
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQD-IRLGDFGLAKILTSDDLASSVV------GTPS 117
L+YLH ILH DVK N+ L+ D L DFG A L D L S++ GT +
Sbjct: 176 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 235
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI--------- 168
+M PE++ P +K DIWS C + M + + + L KI
Sbjct: 236 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPS 295
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
APL + ++ LRK P R SA EL R V
Sbjct: 296 CAPLTAQA-------IQEGLRKEPVHRASAMELRRKV 325
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 80 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 138
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 139 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 198
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 199 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 258
Query: 195 RPSAAELLRHVHL 207
RP ++L + L
Sbjct: 259 RPLFPQILASIEL 271
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 21/153 (13%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 92 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAF 152
PE++ + +KS DIWS+GC + EM S +P F
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 83 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 141
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 202 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 261
Query: 195 RPSAAELLRHVHLQPYVL-KVH 215
RP ++L + L L K+H
Sbjct: 262 RPLFPQILASIELLARSLPKIH 283
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 18/196 (9%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + + +K F +L Q +DYLHA +I+HRD+K +NIF
Sbjct: 106 LAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIF 164
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSV---VGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L + +++GDFGLA + + + V G+ +M PE++ + P+ +SD++S G
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAP-LPTKYSG---AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + +P L Y A + LV ++K E
Sbjct: 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEE 284
Query: 195 RP------SAAELLRH 204
RP S+ ELL+H
Sbjct: 285 RPLFPQILSSIELLQH 300
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 83 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 141
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 202 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 261
Query: 195 RPSAAELLRHVHL 207
RP ++L + L
Sbjct: 262 RPLFPQILASIEL 274
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 33/204 (16%)
Query: 38 MAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDF 97
M ++K FSEEK+ + Q+L L Y+H+ ++HRD+K N+ + +D ++++ DF
Sbjct: 111 MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 170
Query: 98 GLAKILTSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFD 156
GLA+ +D + V T Y PE +L+ + Y DIWS+GC + EM + K FK D
Sbjct: 171 GLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228
Query: 157 -------------------MQALINKINKSIVAPLPTKYSGAFR-----------GLVKS 186
+Q L +K KS + LP F L++
Sbjct: 229 YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288
Query: 187 MLRKNPELRPSAAELLRHVHLQPY 210
ML + + R +AA+ L H +P+
Sbjct: 289 MLELDVDKRLTAAQALTHPFFEPF 312
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 94 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D V T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 210 Y 210
Y
Sbjct: 320 Y 320
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 95 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D V T Y
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 210 Y 210
Y
Sbjct: 321 Y 321
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K ++ S + +C +L Q+L
Sbjct: 92 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 210 Y 210
Y
Sbjct: 318 Y 318
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+ + + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 145
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 203
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 262
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 263 LLRNLLQ 269
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+ + + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 51/241 (21%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLM 64
IR P I + KD ++ + D+ E K + S + +C +L Q+L
Sbjct: 94 IRAPTIEQMKDVYIVQ--------------DLMETDLYKLLKCQHLSNDHICYFLYQILR 139
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD----DLASSVVGTPSYMC 120
L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D + V T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 121 PELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKA-------------------FDMQAL 160
PE++ + +KS DIWS+GC + EM S +P F D+ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 161 INKINKSIVAPLPTKYSGAFR-----------GLVKSMLRKNPELRPSAAELLRHVHLQP 209
IN ++ + LP K + L+ ML NP R + L H +L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 210 Y 210
Y
Sbjct: 320 Y 320
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 195 RPSAAELLRHVHL 207
RP ++L + L
Sbjct: 257 RPLFPQILASIEL 269
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 243 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 269
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 171
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 229
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 288
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 289 LLRNLLQ 295
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ + GGD+ I+ + F + + ++++ L +LH+ I++RD+K NI
Sbjct: 94 LFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 151
Query: 86 LTKDQDIRLGDFGLAKI-LTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYE 144
L KD I++ DFG+ K + D + GTP Y+ PE+L Y D WS G +YE
Sbjct: 152 LDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 211
Query: 145 MTSLKPAFKAFDMQALINKI 164
M + F D + L + I
Sbjct: 212 MLIGQSPFHGQDEEELFHSI 231
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 86 LTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + + G+ +M PE++ PY +SD+++ G
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 195 RPSAAELLRHVHL 207
RP ++L + L
Sbjct: 257 RPLFPQILASIEL 269
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 2 ELISKIRNPFIVEYKDSW---VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKW 58
E + +++P IV + DSW V+ + ++ G + +K+ K+ + L W
Sbjct: 77 EXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRF--KVXKIKVLRSW 134
Query: 59 LVQLLMALDYLHANH--ILHRDVKCSNIFLTK-DQDIRLGDFGLAKILTSDDLASSVVGT 115
Q+L L +LH I+HRD+KC NIF+T +++GD GLA L A +V+GT
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGT 193
Query: 116 PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
P + PE + Y D+++ G C E + + + A I + S V P
Sbjct: 194 PEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFD 252
Query: 176 YSG--AFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
+ +++ +R+N + R S +LL H Q
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 10/204 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+ +P I++ D + ++ Y ++ + +GG++ + I + F+E + Q+L +
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECY-KGGELFDEI--IHRMKFNEVDAAVIIKQVLSGV 149
Query: 67 DYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPEL 123
YLH ++I+HRD+K N+ L KD I++ DFGL+ + + +GT Y+ PE+
Sbjct: 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV 209
Query: 124 LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPTKYSGAF 180
L Y K D+WS+G ++ + + P F Q ++ K+ K + +P S
Sbjct: 210 LRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
+ L+K ML+ + + R SA + L H
Sbjct: 269 KDLIKQMLQFDSQRRISAQQALEH 292
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 143
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 201
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 260
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 261 LLRNLLQ 267
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 43/226 (19%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V +++ E D+ + I +S+ + E + +L QLL L Y+H+ ++HRD+K SN+
Sbjct: 135 VYVVLDLMES-DLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL 191
Query: 86 LTKDQDIRLGDFGLAKILTSDD-----LASSVVGTPSYMCPELLADI-PYGSKSDIWSLG 139
+ ++ ++++GDFG+A+ L + + V T Y PEL+ + Y D+WS+G
Sbjct: 192 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 251
Query: 140 CCIYEMTSLKPAF---------------------------KAFDMQALINKINKSIVAPL 172
C EM + + F A ++A I + P
Sbjct: 252 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPW 311
Query: 173 PTKYSGAFR---GLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVH 215
T Y GA R L+ MLR P R SAA LRH P++ K H
Sbjct: 312 ETVYPGADRQALSLLGRMLRFEPSARISAAAALRH----PFLAKYH 353
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 243 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 269
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 114/220 (51%), Gaps = 16/220 (7%)
Query: 2 ELISKIR-NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+++ IR +PF+V ++ + + +I+ + GG++ + + + F+E ++ ++
Sbjct: 110 QVLEHIRQSPFLVTLHYAF-QTETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVG 166
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL--ASSVVGTPSY 118
++++AL++LH I++RD+K NI L + + L DFGL+K +D+ A GT Y
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 119 MCPELL--ADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVA---PLP 173
M P+++ D + D WSLG +YE+ + F + +I++ I+ P P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 286
Query: 174 TKYSGAFRGLVKSMLRKNPELRPS-----AAELLRHVHLQ 208
+ S + L++ +L K+P+ R A E+ H+ Q
Sbjct: 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 43/226 (19%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V +++ E D+ + I +S+ + E + +L QLL L Y+H+ ++HRD+K SN+
Sbjct: 134 VYVVLDLMES-DLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL 190
Query: 86 LTKDQDIRLGDFGLAKILTSDD-----LASSVVGTPSYMCPELLADI-PYGSKSDIWSLG 139
+ ++ ++++GDFG+A+ L + + V T Y PEL+ + Y D+WS+G
Sbjct: 191 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250
Query: 140 CCIYEMTSLKPAF---------------------------KAFDMQALINKINKSIVAPL 172
C EM + + F A ++A I + P
Sbjct: 251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPW 310
Query: 173 PTKYSGAFR---GLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVH 215
T Y GA R L+ MLR P R SAA LRH P++ K H
Sbjct: 311 ETVYPGADRQALSLLGRMLRFEPSARISAAAALRH----PFLAKYH 352
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 110/215 (51%), Gaps = 12/215 (5%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ +I++P ++ + + E V +I GG++ + + + S +EE+ ++L Q+
Sbjct: 67 ILKEIQHPNVITLHEVY-ENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQD-----IRLGDFGLAKILTSDDLASSVVGTPS 117
L + YLH+ I H D+K NI L D++ I++ DFGLA + + ++ GTP
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPT 174
++ PE++ P G ++D+WS+G Y + S F Q A ++ +N +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQP 209
S + ++ +L K+P+ R + + L+H ++P
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 1 MELISKIRNPFIVEYKDS-WVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
++L+ ++R+ +++ D + E + +++ +C G M E + K F + +
Sbjct: 57 IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYF 115
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL---TSDDLASSVVGTP 116
QL+ L+YLH+ I+H+D+K N+ LT +++ G+A+ L +DD + G+P
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 117 SYMCPELL--ADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT 174
++ PE+ D G K DIWS G +Y +T+ F+ ++ L I K A +P
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA-IPG 234
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
L+K ML P R S ++ +H
Sbjct: 235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 26/192 (13%)
Query: 36 GDMAEAIKKANSKL-FSEEKLCKWLVQLLMALDYLHANH--ILHRDVKCSNIFLTKDQDI 92
G + E +KK S+ S + + K Q A+ ++H I+HRD+K N+ L+ I
Sbjct: 118 GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTI 177
Query: 93 RLGDFGLA---------------KILTSDDLASSVVGTPSYMCPELL---ADIPYGSKSD 134
+L DFG A + L +++ + TP Y PE++ ++ P G K D
Sbjct: 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT--TPMYRTPEIIDLYSNFPIGEKQD 235
Query: 135 IWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPEL 194
IW+LGC +Y + + F+ ++N K + P T+Y+ F L+++ML+ NPE
Sbjct: 236 IWALGCILYLLCFRQHPFEDGAKLRIVN--GKYSIPPHDTQYT-VFHSLIRAMLQVNPEE 292
Query: 195 RPSAAELLRHVH 206
R S AE++ +
Sbjct: 293 RLSIAEVVHQLQ 304
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ + GGD+ I+ + F + + ++++ L +LH+ I++RD+K NI
Sbjct: 93 LFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 150
Query: 86 LTKDQDIRLGDFGLAKI-LTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYE 144
L KD I++ DFG+ K + D + GTP Y+ PE+L Y D WS G +YE
Sbjct: 151 LDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210
Query: 145 MTSLKPAFKAFDMQALINKI 164
M + F D + L + I
Sbjct: 211 MLIGQSPFHGQDEEELFHSI 230
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 15/221 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V +I+ GG++ + + + S SEE+ ++ Q+L ++YLH I H D+K NI
Sbjct: 90 VVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 86 LTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCC 141
L I+L DFGLA + ++ GTP ++ PE++ P G ++D+WS+G
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 142 IYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSA 198
Y + S F Q A I ++ ++ S + ++ +L K R +
Sbjct: 208 TYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI 267
Query: 199 AELLRHVHLQPYVLKVHLKLNSPRRNSLSHWP--ESNYARR 237
E LRH P++ V + RR S+ + Y RR
Sbjct: 268 QEALRH----PWITPVDNQQAMVRRESVVNLENFRKQYVRR 304
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 5 SKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLM 64
+ + +P IV + V G +V I + EGG + + +K+ E++ +L Q L
Sbjct: 140 AGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALE 196
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQD-IRLGDFGLAKILTSDDLASSVV------GTPS 117
L+YLH+ ILH DVK N+ L+ D L DFG A L D L S++ GT +
Sbjct: 197 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS--IVAPLPTK 175
+M PE++ +K D+WS C + M + + F L KI V +P
Sbjct: 257 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPS 316
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAEL 201
+ ++ LRK P R SAAEL
Sbjct: 317 CAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ P
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPA 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 15/221 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V +I+ GG++ + + + S SEE+ ++ Q+L ++YLH I H D+K NI
Sbjct: 90 VVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 86 LTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCC 141
L I+L DFGLA + ++ GTP ++ PE++ P G ++D+WS+G
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 142 IYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSA 198
Y + S F Q A I ++ ++ S + ++ +L K R +
Sbjct: 208 TYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI 267
Query: 199 AELLRHVHLQPYVLKVHLKLNSPRRNSLSHWP--ESNYARR 237
E LRH P++ V + RR S+ + Y RR
Sbjct: 268 QEALRH----PWITPVDNQQAMVRRESVVNLENFRKQYVRR 304
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P IV +K+ + ++ I++ + GG++ E I N+ FSE++ + QL+ +
Sbjct: 72 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRL--GDFGLAKILTSDDLASSVVGTPSYMCPELL 124
Y HA + HRD+K N L RL DFG +K S VGTP+Y+ PE+L
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL 188
Query: 125 ADIPY-GSKSDIWSLGCCIYEMTSLKPAF----KAFDMQALINKI-NKSIVAPLPTKYSG 178
Y G +D+WS G +Y M F + + + I++I N P S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 179 AFRGLVKSMLRKNPELRPSAAELLRH 204
R L+ + +P R S E+ H
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 220
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 280
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 281 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 307
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 17/241 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++ +S +R+P +V D++ E + +I F GG++ E + ++K+ SE++ +++
Sbjct: 99 IQTMSVLRHPTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMR 156
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLT--KDQDIRLGDFGLAKILTSDDLASSVVGTPSY 118
Q+ L ++H N+ +H D+K NI T + +++L DFGL L GT +
Sbjct: 157 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF 216
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE+ P G +D+WS+G Y + S F + + + + +SG
Sbjct: 217 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 276
Query: 179 A---FRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPRRNSLSHWPESNYA 235
+ ++ +L +P R + + L H L P N+P R+ S P S Y
Sbjct: 277 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP--------GNAPGRD--SQIPSSRYT 326
Query: 236 R 236
+
Sbjct: 327 K 327
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 243
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 244 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 270
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 220
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 280
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 281 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 307
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 181
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 241
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 242 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 268
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 243 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 269
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 243 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 269
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 243
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 244 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 106 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 164
Query: 86 LTKDQDIRLGDFGLA---KILTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 165 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 225 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 284
Query: 195 RPSAAELLRHVHLQPYVL-KVH 215
RP ++L + L L K+H
Sbjct: 285 RPLFPQILASIELLARSLPKIH 306
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P AF ++ +R E RP A
Sbjct: 243 TPCP-----AFMKKLQPTVRNYVENRPKYA 267
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 237 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 263
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 175
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 236 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 262
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+PF+V S + + +I + GGD+ +++ + EE + ++ +AL+Y
Sbjct: 112 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNY 168
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMCPELLADI 127
LH I++RD+K N+ L + I+L D+G+ K L D S+ GTP+Y+ PE+L
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 128 PYGSKSDIWSLGCCIYEMTSLKPAF 152
YG D W+LG ++EM + + F
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM K F D NK+ + +
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
P P F ++ +R E RP A L
Sbjct: 237 TPCP-----EFMKKLQPTVRNYVENRPKYAGL 263
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 32/184 (17%)
Query: 57 KWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS-DDLASSVVGT 115
K+L Q++ + + H+++I+HRD+K NI +++ ++L DFG A+ L + ++ V T
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVAT 187
Query: 116 PSYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAFKA--------FDMQALINKI-- 164
Y PELL D+ YG D+W++GC + EM +P F M L N I
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 165 -----NKSIV------------APLPTKY---SGAFRGLVKSMLRKNPELRPSAAELLRH 204
NK+ V PL +Y S L K L +P+ RP AELL H
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307
Query: 205 VHLQ 208
Q
Sbjct: 308 DFFQ 311
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V +I+ GG++ + + + S SEE+ ++ Q+L ++YLH I H D+K NI
Sbjct: 90 VVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 86 LTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCC 141
L I+L DFGLA + ++ GTP ++ PE++ P G ++D+WS+G
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 142 IYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSA 198
Y + S F Q A I ++ + S + ++ +L K R +
Sbjct: 208 TYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI 267
Query: 199 AELLRHVHLQPYVLKVHLKLNSPRRNSLSHWP--ESNYARR 237
E LRH P++ V + RR S+ + Y RR
Sbjct: 268 QEALRH----PWITPVDNQQAMVRRESVVNLENFRKQYVRR 304
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 17/241 (7%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++ +S +R+P +V D++ E + +I F GG++ E + ++K+ SE++ +++
Sbjct: 205 IQTMSVLRHPTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMR 262
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLT--KDQDIRLGDFGLAKILTSDDLASSVVGTPSY 118
Q+ L ++H N+ +H D+K NI T + +++L DFGL L GT +
Sbjct: 263 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF 322
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE+ P G +D+WS+G Y + S F + + + + +SG
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 382
Query: 179 A---FRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPRRNSLSHWPESNYA 235
+ ++ +L +P R + + L H L P N+P R+ S P S Y
Sbjct: 383 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP--------GNAPGRD--SQIPSSRYT 432
Query: 236 R 236
+
Sbjct: 433 K 433
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + GG++ + + A+ ++ +E K+ Q++ A+ Y H I+HRD+K N+
Sbjct: 88 LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L D +I++ DFG + T + + G+P Y PEL Y G + D+WSLG +Y
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ S F +++ L ++ + +P S L+K L NP R + ++++
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
Query: 205 V---------HLQPYVLKVHLKLNSPRRNSL 226
L+PYV + PRR L
Sbjct: 265 RWMNVGHEDDELKPYVAPLP-DYKDPRRTEL 294
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 98 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 156
Query: 86 LTKDQDIRLGDFGLA---KILTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 157 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 216
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 217 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 276
Query: 195 RPSAAELLRHVHLQPYVL-KVH 215
RP ++L + L L K+H
Sbjct: 277 RPLFPQILASIELLARSLPKIH 298
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V +I+ GG++ + + + S SEE+ ++ Q+L ++YLH I H D+K NI
Sbjct: 90 VVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 86 LTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCC 141
L I+L DFGLA + ++ GTP ++ PE++ P G ++D+WS+G
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 142 IYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSA 198
Y + S F Q A I ++ + S + ++ +L K R +
Sbjct: 208 TYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI 267
Query: 199 AELLRHVHLQPYVLKVHLKLNSPRRNSLSHWP--ESNYARR 237
E LRH P++ V + RR S+ + Y RR
Sbjct: 268 QEALRH----PWITPVDNQQAMVRRESVVNLENFRKQYVRR 304
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+ + + S+ + + +++ + GG+M +++ F E + Q+
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQI 151
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPE 209
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 268
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 269 LLRNLLQ 275
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + PF+V+ + S+ + + +++ + GG+M +++ FSE + Q+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
++ +YLH+ +++RD+K N+ + + I++ DFG AK + + GTP + PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEALAPE 208
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
++ Y D W+LG IYEM + P F A + KI V P+ +S +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKD 267
Query: 183 LVKSMLR 189
L++++L+
Sbjct: 268 LLRNLLQ 274
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + GG++ + + A+ ++ +E K+ Q++ A+ Y H I+HRD+K N+
Sbjct: 88 LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L D +I++ DFG + T + + G+P Y PEL Y G + D+WSLG +Y
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLR 203
+ S F +++ L ++ + +P S L+K L NP R + ++++
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + GG++ + + A+ ++ +E K+ Q++ A+ Y H I+HRD+K N+
Sbjct: 88 LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L D +I++ DFG + T + + G+P Y PEL Y G + D+WSLG +Y
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLR 203
+ S F +++ L ++ + +P S L+K L NP R + ++++
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + GG++ + I K N +L E++ + Q+L +DY H + ++HRD+K N+
Sbjct: 91 IFMVMEYVSGGELFDYICK-NGRL-DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVL 148
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L + ++ DFGL+ +++ + G+P+Y PE+++ Y G + DIWS G +Y
Sbjct: 149 LDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA 208
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ F + L KI I P + + L+K ML+ +P R + ++ H
Sbjct: 209 LLCGTLPFDDDHVPTLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ +++ +
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM 180
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + E+ F+ D NK+ + +
Sbjct: 181 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG 240
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPS 197
P S F ++ +R E RP+
Sbjct: 241 TP-----SAEFMAALQPTVRNYVENRPA 263
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L+ + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 10 PFIVEYKDSWVERG-CYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
P+IV++ + G C++C+ + + + + EE L K + + AL++
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 69 LHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELL--- 124
L N I+HRD+K SNI L + +I+L DFG++ L + G YM PE +
Sbjct: 141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 125 -ADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT-------KY 176
+ Y +SD+WSLG +YE+ + + + ++ ++ +++ + + P ++
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWN--SVFDQLTQVVKGDPPQLSNSEEREF 258
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL 212
S +F V L K+ RP ELL+H P++L
Sbjct: 259 SPSFINFVNLCLTKDESKRPKYKELLKH----PFIL 290
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIII 30
+++PFI+ Y++ VE CYVC I+
Sbjct: 284 LKHPFILMYEERAVEVACYVCKIL 307
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ +CEG + + +K F KL Q +DYLHA I+HRD+K +NIF
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 86 LTKDQDIRLGDFGLA---KILTSDDLASSVVGTPSYMCPELLA---DIPYGSKSDIWSLG 139
L +D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 137 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 140 CCIYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPEL 194
+YE MT P + +I + + ++P +K A + L+ L+K +
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 195 RPSAAELLRHVHL 207
RP ++L + L
Sbjct: 257 RPLFPQILASIEL 269
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ ++ +P I++ + + ++ Y +++ GG++ + I + FSE + Q+
Sbjct: 57 VLKQLDHPNIMKLYEFFEDKRNYY-LVMEVYRGGELFDEI--ILRQKFSEVDAAVIMKQV 113
Query: 63 LMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
L YLH ++I+HRD+K N+ L ++D I++ DFGL+ +GT Y+
Sbjct: 114 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 173
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPTKY 176
PE+L Y K D+WS G +Y + P F Q ++ ++ K S P T+
Sbjct: 174 APEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLK 213
S + LVK ML P R SA E L H P+++K
Sbjct: 233 SDEAKQLVKLMLTYEPSKRISAEEALNH----PWIVK 265
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 5 SKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLM 64
+ + +P IV + V G +V I + EGG + + +K+ E++ +L Q L
Sbjct: 121 AGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALE 177
Query: 65 ALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVV------GTPS 117
L+YLH+ ILH DVK N+ L+ D L DFG A L D L ++ GT +
Sbjct: 178 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS--IVAPLPTK 175
+M PE++ +K D+WS C + M + + F L KI V +P
Sbjct: 238 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPS 297
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAEL 201
+ ++ LRK P R SAAEL
Sbjct: 298 CAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 24 CYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLC-KWLVQLLMALDYLHANHILHRDVKCS 82
Y+ I + C ++ + + + S E +C +Q+ A+++LH+ ++HRD+K S
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPS 193
Query: 83 NIFLTKDQDIRLGDFGLAKILTSDDLASSV-------------VGTPSYMCPELLADIPY 129
NIF T D +++GDFGL + D+ +V VGT YM PE + Y
Sbjct: 194 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNY 253
Query: 130 GSKSDIWSLGCCIYEMTSLKPAFKAFDMQA----LINKINKSIVAPLPTKYSGAFRGLVK 185
K DI+SLG ++E+ +F Q +I + L T+ +V+
Sbjct: 254 SHKVDIFSLGLILFEL------LYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQ 307
Query: 186 SMLRKNPELRPSAAELLRH 204
ML +P RP A +++ +
Sbjct: 308 DMLSPSPTERPEATDIIEN 326
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 40/236 (16%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYV------------CIIIGFCEGGDMAEAIKKANSK 48
+ L++ + + ++V Y +W+ER +V I +CE + + I N
Sbjct: 53 VXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN-- 110
Query: 49 LFSEEKLCKWLV--QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK----- 101
++++ W + Q+L AL Y+H+ I+HR++K NIF+ + +++++GDFGLAK
Sbjct: 111 -LNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 102 --ILTSD--------DLASSVVGTPSYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLKP 150
IL D D +S +GT Y+ E+L Y K D +SLG +E + P
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE--XIYP 227
Query: 151 AFKAFDMQALINKINKSIVAPLPTKYSG----AFRGLVKSMLRKNPELRPSAAELL 202
+ ++ K+ +S+ P + + +++ ++ +P RP A LL
Sbjct: 228 FSTGXERVNILKKL-RSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ ++ +P I++ + + ++ Y +++ GG++ + I + FSE + Q+
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYY-LVMEVYRGGELFDEI--ILRQKFSEVDAAVIMKQV 130
Query: 63 LMALDYLHANHILHRDVKCSNIFL---TKDQDIRLGDFGLAKILTSDDLASSVVGTPSYM 119
L YLH ++I+HRD+K N+ L ++D I++ DFGL+ +GT Y+
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 190
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINK---SIVAPLPTKY 176
PE+L Y K D+WS G +Y + P F Q ++ ++ K S P T+
Sbjct: 191 APEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLK 213
S + LVK ML P R SA E L H P+++K
Sbjct: 250 SDEAKQLVKLMLTYEPSKRISAEEALNH----PWIVK 282
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + GG++ + + A+ ++ +E K+ Q++ A+ Y H I+HRD+K N+
Sbjct: 88 LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L D +I++ DFG + T + G+P Y PEL Y G + D+WSLG +Y
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLR 203
+ S F +++ L ++ + +P S L+K L NP R + ++++
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ +++++ +P ++ D++ E + +I+ F GG++ + I + K+ SE ++ ++
Sbjct: 99 ISIMNQLHHPKLINLHDAF-EDKYEMVLILEFLSGGELFDRIAAEDYKM-SEAEVINYMR 156
Query: 61 QLLMALDYLHANHILHRDVKCSNIF--LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSY 118
Q L ++H + I+H D+K NI K +++ DFGLA L D++ T +
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTS-LKPAFKAFDMQALIN--KINKSIVAPLPTK 175
PE++ P G +D+W++G Y + S L P D++ L N + + +
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS 276
Query: 176 YSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPRRNSLSHWPESNYA 235
S + +K++L+K P R + + L H L+ + ++ S R N + + YA
Sbjct: 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYA 336
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + GG++ + + A+ ++ +E K+ Q++ A+ Y H I+HRD+K N+
Sbjct: 88 LYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L D +I++ DFG + T + + G P Y PEL Y G + D+WSLG +Y
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLR 203
+ S F +++ L ++ + +P S L+K L NP R + ++++
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+PF+V S + + +I + GGD+ +++ + EE + ++ +AL+Y
Sbjct: 80 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNY 136
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMCPELLADI 127
LH I++RD+K N+ L + I+L D+G+ K L D S GTP+Y+ PE+L
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 128 PYGSKSDIWSLGCCIYEMTSLKPAF 152
YG D W+LG ++EM + + F
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+PF+V S + + +I + GGD+ +++ + EE + ++ +AL+Y
Sbjct: 65 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNY 121
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMCPELLADI 127
LH I++RD+K N+ L + I+L D+G+ K L D S GTP+Y+ PE+L
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 128 PYGSKSDIWSLGCCIYEMTSLKPAF 152
YG D W+LG ++EM + + F
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+PF+V S + + +I + GGD+ +++ + EE + ++ +AL+Y
Sbjct: 69 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNY 125
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAK-ILTSDDLASSVVGTPSYMCPELLADI 127
LH I++RD+K N+ L + I+L D+G+ K L D S GTP+Y+ PE+L
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 128 PYGSKSDIWSLGCCIYEMTSLKPAF 152
YG D W+LG ++EM + + F
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 9/191 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V +I+ GG++ + + + S SEE+ ++ Q+L ++YLH I H D+K NI
Sbjct: 90 VVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 86 LTKDQ----DIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCC 141
L I+L DFGLA + ++ GTP ++ PE++ P G ++D+WS+G
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 142 IYEMTSLKPAFKAFDMQ---ALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSA 198
Y + S F Q A I ++ + S + ++ +L K R +
Sbjct: 208 TYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI 267
Query: 199 AELLRHVHLQP 209
E LRH + P
Sbjct: 268 QEALRHPWITP 278
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P IV +K+ + ++ I++ + GG++ E I N+ FSE++ + QL+ +
Sbjct: 72 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLG--DFGLAKILTSDDLASSVVGTPSYMCPELL 124
Y HA + HRD+K N L RL DFG +K S VGTP+Y+ PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 125 ADIPY-GSKSDIWSLGCCIYEMTSLKPAF----KAFDMQALINKI-NKSIVAPLPTKYSG 178
Y G +D+WS G +Y M F + + + I++I N P S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 179 AFRGLVKSMLRKNPELRPSAAELLRH 204
R L+ + +P R S E+ H
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ ++ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y + DIWS+GC + E+ F+ D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRP 196
P S F ++ +R E RP
Sbjct: 243 TP-----SAEFMAALQPTVRNYVENRP 264
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P IV +K+ + ++ I++ + GG++ E I N+ FSE++ + QL+ +
Sbjct: 71 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 127
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLG--DFGLAKILTSDDLASSVVGTPSYMCPELL 124
Y HA + HRD+K N L RL DFG +K S VGTP+Y+ PE+L
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 125 ADIPY-GSKSDIWSLGCCIYEMTSLKPAF----KAFDMQALINKI-NKSIVAPLPTKYSG 178
Y G +D+WS G +Y M F + + + I++I N P S
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 247
Query: 179 AFRGLVKSMLRKNPELRPSAAELLRH 204
R L+ + +P R S E+ H
Sbjct: 248 ECRHLISRIFVADPAKRISIPEIRNH 273
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I+ +GG++ I+ + F+E + + + A+ YLH+ +I
Sbjct: 124 YENLYAGRKC-LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI 182
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK TS + ++ TP Y+ PE+L Y
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAFDMQAL-------INKINKSIVAPLPTKYSGAFRGLV 184
D WSLG Y + P F + A+ I P ++ S + L+
Sbjct: 243 SCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLI 302
Query: 185 KSMLRKNPELRPSAAELLRH 204
+++L+ P R + E H
Sbjct: 303 RNLLKTEPTQRXTITEFXNH 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 187
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y D+WS+GC + EM K F D NK+ + +
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 247
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 248 TPCP-----EFMKKLQPTVRTYVENRPKYA 272
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 4 ISKIRN-PFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
I KI N P IV+ + +E + +I+ + GG++ + + A+ ++ +E K+ Q+
Sbjct: 64 IMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFR-QI 120
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+ A+ Y H I+HRD+K N+ L D +I++ DFG + T + G+P Y PE
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE 180
Query: 123 LLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
L Y G + D+WSLG +Y + S F +++ L ++ + +P S
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCE 239
Query: 182 GLVKSMLRKNPELRPSAAELLR 203
L+K L NP R + ++++
Sbjct: 240 NLLKRFLVLNPIKRGTLEQIMK 261
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y D+WS+GC + EM K F D NK+ + +
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 236
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 237 TPCP-----EFMKKLQPTVRTYVENRPKYA 261
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ GGD+ + + +FSE + + ++++ L+++H +++RD+K +NI
Sbjct: 266 LSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 323
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLA-DIPYGSKSDIWSLGCCIYE 144
L + +R+ D GLA + +S VGT YM PE+L + Y S +D +SLGC +++
Sbjct: 324 LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 145 MTSLKPAFKAFDMQAL--INKINKSIVAPLPTKYSGAFRGLVKSMLRKN 191
+ F+ + I+++ ++ LP +S R L++ +L+++
Sbjct: 383 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD 431
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ GGD+ + + +FSE + + ++++ L+++H +++RD+K +NI
Sbjct: 267 LSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLA-DIPYGSKSDIWSLGCCIYE 144
L + +R+ D GLA + +S VGT YM PE+L + Y S +D +SLGC +++
Sbjct: 325 LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 145 MTSLKPAFKAFDMQAL--INKINKSIVAPLPTKYSGAFRGLVKSMLRKN 191
+ F+ + I+++ ++ LP +S R L++ +L+++
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD 432
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 4 ISKIRN-PFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
I KI N P IV+ + +E + +I+ + GG++ + + A+ ++ +E K+ Q+
Sbjct: 67 IMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFR-QI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+ A+ Y H I+HRD+K N+ L D +I++ DFG + T + G P Y PE
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE 183
Query: 123 LLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
L Y G + D+WSLG +Y + S F +++ L ++ + +P S
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCE 242
Query: 182 GLVKSMLRKNPELRPSAAELLR 203
L+K L NP R + ++++
Sbjct: 243 NLLKRFLVLNPIKRGTLEQIMK 264
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 4 ISKIRN-PFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
I KI N P IV+ + +E + +++ + GG++ + + A+ ++ +E K+ Q+
Sbjct: 67 IMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QI 123
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
+ A+ Y H +I+HRD+K N+ L D +I++ DFG + T + + G+P Y PE
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPE 183
Query: 123 LLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKI 164
L Y G + D+WSLG +Y + S F +++ L ++
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 243
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 244 TPCP-----EFMKKLQPTVRTYVENRPKYA 268
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 5 SKIRNPFIVEYKDSW---VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+ + +P IV D+ G I++ + +G + + + + ++ + +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILT----SDDLASSVVGTPS 117
AL++ H N I+HRDVK +NI ++ +++ DFG+A+ + S ++V+GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE ++SD++SLGC +YE+ + +P F ++ + + P ++
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHE 244
Query: 178 GA---FRGLVKSMLRKNPELRPSAAELLR 203
G +V L KNPE R A +R
Sbjct: 245 GLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ GGD+ + + +FSE + + ++++ L+++H +++RD+K +NI
Sbjct: 267 LSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLA-DIPYGSKSDIWSLGCCIYE 144
L + +R+ D GLA + +S VGT YM PE+L + Y S +D +SLGC +++
Sbjct: 325 LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 145 MTSLKPAFKAFDMQAL--INKINKSIVAPLPTKYSGAFRGLVKSMLRKN 191
+ F+ + I+++ ++ LP +S R L++ +L+++
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD 432
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P IV +K+ + ++ II+ + GG++ E I N+ FSE++ + QLL +
Sbjct: 73 LRHPNIVRFKEV-ILTPTHLAIIMEYASGGELYERI--CNAGRFSEDEARFFFQQLLSGV 129
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLG--DFGLAKILTSDDLASSVVGTPSYMCPELL 124
Y H+ I HRD+K N L RL DFG +K S VGTP+Y+ PE+L
Sbjct: 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 189
Query: 125 ADIPY-GSKSDIWSLGCCIYEM 145
Y G +D+WS G +Y M
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVM 211
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ GGD+ + + +FSE + + ++++ L+++H +++RD+K +NI
Sbjct: 267 LSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLA-DIPYGSKSDIWSLGCCIYE 144
L + +R+ D GLA + +S VGT YM PE+L + Y S +D +SLGC +++
Sbjct: 325 LDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 145 MTSLKPAFKAFDMQAL--INKINKSIVAPLPTKYSGAFRGLVKSMLRKN 191
+ F+ + I+++ ++ LP +S R L++ +L+++
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD 432
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 47/235 (20%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNI 84
Y+ +++ C D+ +KK S + E+ W +L A+ +H + I+H D+K +N
Sbjct: 130 YIYMVME-CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN- 185
Query: 85 FLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-------- 133
FL D ++L DFG+A + D + S VGT +YM PE + D+ ++
Sbjct: 186 FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 134 ---DIWSLGCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGL 183
D+WSLGC +Y MT K F Q +IN+I+K +I+ P P + +
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 184 VKSMLRKNPELRPSAAELLRHVHLQ-----------------PYVLKVHLKLNSP 221
+K L+++P+ R S ELL H ++Q YVL + LNSP
Sbjct: 301 LKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 355
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
V T Y PE++ + Y D+WS+GC + EM K F D NK+ + +
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPCP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPCP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WLVQLLMALDYLHANHILHRDVKCSN 83
Y+ +++ + GGD+ + + EK + + ++++ALD +H+ +HRDVK N
Sbjct: 143 YLYMVMEYMPGGDLVNLMSNYDVP----EKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 198
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWS 137
+ L K ++L DFG + + + + VGTP Y+ PE+L D YG + D WS
Sbjct: 199 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 258
Query: 138 LGCCIYEMTSLKPAFKAFDMQALINKI---NKSIVAPLPTKYSGAFRGLVKSML--RKNP 192
+G +YEM F A + +KI S+ P S + L+ + L R+
Sbjct: 259 VGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 318
Query: 193 ELRPSAAELLRHVHLQ 208
R E+ RH+ +
Sbjct: 319 LGRNGVEEIKRHLFFK 334
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 125 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 184
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 244
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 245 TPCP-----EFMKKLQPTVRTYVENRPKYA 269
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WLVQLLMALDYLHANHILHRDVKCSN 83
Y+ +++ + GGD+ + + EK + + ++++ALD +H+ +HRDVK N
Sbjct: 148 YLYMVMEYMPGGDLVNLMSNYDVP----EKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWS 137
+ L K ++L DFG + + + + VGTP Y+ PE+L D YG + D WS
Sbjct: 204 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 263
Query: 138 LGCCIYEMTSLKPAFKAFDMQALINKI---NKSIVAPLPTKYSGAFRGLVKSML--RKNP 192
+G +YEM F A + +KI S+ P S + L+ + L R+
Sbjct: 264 VGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 323
Query: 193 ELRPSAAELLRHVHLQ 208
R E+ RH+ +
Sbjct: 324 LGRNGVEEIKRHLFFK 339
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + GG++ + + A+ + +E K+ Q++ A+ Y H I+HRD+K N+
Sbjct: 81 LYLVMEYASGGEVFDYLV-AHGWMKEKEARAKFR-QIVSAVQYCHQKFIVHRDLKAENLL 138
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L D +I++ DFG + T + + G+P Y PEL Y G + D+WSLG +Y
Sbjct: 139 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 198
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLR 203
+ S F +++ L ++ + +P S L+K L NP R + ++++
Sbjct: 199 LVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 256
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 10 PFIVEYKDSWVERG-CYVCI-IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
PF V + + G ++C+ ++ + I K + E+ L K V ++ AL+
Sbjct: 66 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT--IPEDILGKIAVSIVKALE 123
Query: 68 YLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSV-VGTPSYMCPEL-- 123
+LH+ ++HRDVK SN+ + +++ DFG++ L DD+A + G YM PE
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDAGCKPYMAPERIN 182
Query: 124 --LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT----KYS 177
L Y KSDIWSLG + E+ L+ + ++ ++ + + P P K+S
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLPADKFS 240
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRH 204
F L+KN + RP+ EL++H
Sbjct: 241 AEFVDFTSQCLKKNSKERPTYPELMQH 267
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+GC + EM F D NK+ + +
Sbjct: 183 TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPCP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WLVQLLMALDYLHANHILHRDVKCSN 83
Y+ +++ + GGD+ + + EK + + ++++ALD +H+ +HRDVK N
Sbjct: 148 YLYMVMEYMPGGDLVNLMSNYDVP----EKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWS 137
+ L K ++L DFG + + + + VGTP Y+ PE+L D YG + D WS
Sbjct: 204 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 263
Query: 138 LGCCIYEMTSLKPAFKAFDMQALINKI---NKSIVAPLPTKYSGAFRGLVKSML--RKNP 192
+G +YEM F A + +KI S+ P S + L+ + L R+
Sbjct: 264 VGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 323
Query: 193 ELRPSAAELLRHVHLQ 208
R E+ RH+ +
Sbjct: 324 LGRNGVEEIKRHLFFK 339
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 29/197 (14%)
Query: 33 CEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI 92
C D+ +KK S + E+ W +L A+ +H + I+H D+K +N FL D +
Sbjct: 137 CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGML 193
Query: 93 RLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSL 138
+L DFG+A + D + S VGT +YM PE + D+ ++ D+WSL
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 139 GCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGLVKSMLRKN 191
GC +Y MT K F Q +IN+I+K +I+ P P + ++K L+++
Sbjct: 254 GCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 308
Query: 192 PELRPSAAELLRHVHLQ 208
P+ R S ELL H ++Q
Sbjct: 309 PKQRISIPELLAHPYVQ 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 46/227 (20%)
Query: 33 CEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI 92
C D+ +KK S + E+ W +L A+ +H + I+H D+K +N FL D +
Sbjct: 90 CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGML 146
Query: 93 RLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSL 138
+L DFG+A + D + S VGT +YM PE + D+ ++ D+WSL
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 139 GCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGLVKSMLRKN 191
GC +Y MT K F Q +IN+I+K +I+ P P + ++K L+++
Sbjct: 207 GCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 261
Query: 192 PELRPSAAELLRHVHLQ-----------------PYVLKVHLKLNSP 221
P+ R S ELL H ++Q YVL + LNSP
Sbjct: 262 PKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 308
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 82/187 (43%), Gaps = 39/187 (20%)
Query: 54 KLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSV 112
K +W QLL L + H N ILHRD+K N+ + K ++LGDFGLA+ + SS
Sbjct: 111 KYFQW--QLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 113 VGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKA----------FDMQALI 161
V T Y P+ L+ Y + DIWS GC + EM + KP F FD+
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTP 228
Query: 162 NKINKSIVAPLPTKYS------------------------GAFRGLVKSMLRKNPELRPS 197
N+ V LP KY+ G + +L+ NP++R S
Sbjct: 229 NESLWPSVTKLP-KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS 287
Query: 198 AAELLRH 204
A + L H
Sbjct: 288 AKQALHH 294
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 5 SKIRNPFIVEYKDSW---VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+ + +P IV D+ G I++ + +G + + + + ++ + +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILT----SDDLASSVVGTPS 117
AL++ H N I+HRDVK +NI ++ +++ DFG+A+ + S ++V+GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE ++SD++SLGC +YE+ + +P F ++ + + P ++
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244
Query: 178 GA---FRGLVKSMLRKNPELRPSAAELLR 203
G +V L KNPE R A +R
Sbjct: 245 GLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+++ + GG++ + I K E + + Q+L A+DY H + ++HRD+K N+ L
Sbjct: 88 MVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 88 KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMT 146
+ ++ DFGL+ +++ + + G+P+Y PE+++ Y G + DIWS G +Y +
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 147 SLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
F + L KI + +P + + L+ ML+ +P R + ++ H
Sbjct: 206 CGTLPFDDEHVPTLFKKIRGGVFY-IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 5 SKIRNPFIVEYKDSW---VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+ + +P IV D+ G I++ + +G + + + + ++ + +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILT----SDDLASSVVGTPS 117
AL++ H N I+HRDVK +NI ++ +++ DFG+A+ + S ++V+GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE ++SD++SLGC +YE+ + +P F ++ + + P ++
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244
Query: 178 GA---FRGLVKSMLRKNPELRPSAAELLR 203
G +V L KNPE R A +R
Sbjct: 245 GLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 32/180 (17%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS-DDLASSVVGTPSYM 119
Q L A+++ H ++ +HRDVK NI +TK I+L DFG A++LT D V T Y
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYR 169
Query: 120 CPELL-ADIPYGSKSDIWSLGCCIYEMTS---LKPAFKAFDMQALINKINKSIV------ 169
PELL D YG D+W++GC E+ S L P D LI K ++
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
Query: 170 ------------------APLPTKY---SGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
PL K+ S GL+K L +P R + +LL H + +
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK-LFSEEKLCKWLVQ 61
++ ++R+P IV + + V + + I+ + G + + K+ ++ E +
Sbjct: 87 IMKRLRHPNIVLFMGA-VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145
Query: 62 LLMALDYLHANH--ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSY 118
+ ++YLH + I+HR++K N+ + K +++ DFGL+++ S L+S S GTP +
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEW 205
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKIN-KSIVAPLPTKYS 177
M PE+L D P KSD++S G ++E+ +L+ + + ++ + K +P +
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN 265
Query: 178 GAFRGLVKSMLRKNPELRPSAAELL 202
+++ P RPS A ++
Sbjct: 266 PQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 5 SKIRNPFIVEYKDSW---VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+ + +P IV D+ G I++ + +G + + + + ++ + +
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILT----SDDLASSVVGTPS 117
AL++ H N I+HRDVK +NI ++ +++ DFG+A+ + S ++V+GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE ++SD++SLGC +YE+ + +P F ++ + + P ++
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244
Query: 178 GA---FRGLVKSMLRKNPELRPSAAELLR 203
G +V L KNPE R A +R
Sbjct: 245 GLSADLDAVVLKALAKNPENRYQTAAEMR 273
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ + GG++ + + A+ + +E K+ Q++ A+ Y H I+HRD+K N+
Sbjct: 88 LYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFR-QIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYE 144
L D +I++ DFG + T + + G P Y PEL Y G + D+WSLG +Y
Sbjct: 146 LDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 145 MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ S F +++ L ++ + +P S L+K L NP R + ++ +
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYR-IPFYXSTDCENLLKKFLILNPSKRGTLEQIXKD 264
Query: 205 V---------HLQPYVLKVHLKLNSPRRNSL 226
L+PYV + PRR L
Sbjct: 265 RWXNVGHEDDELKPYVEPLP-DYKDPRRTEL 294
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L+ + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+G + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
E++ L Q+L+ + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+ V T Y PE++ + Y DIWS+G + EM F D NK+ + +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 170 APLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
P P F ++ +R E RP A
Sbjct: 243 TPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 10 PFIVEYKDSWVERG-CYVCI-IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
PF V + + G ++C+ ++ + I K + E+ L K V ++ AL+
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT--IPEDILGKIAVSIVKALE 167
Query: 68 YLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSV-VGTPSYMCPEL-- 123
+LH+ ++HRDVK SN+ + +++ DFG++ L D +A ++ G YM PE
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERIN 226
Query: 124 --LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT----KYS 177
L Y KSDIWSLG + E+ L+ + ++ ++ + + P P K+S
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLPADKFS 284
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRH 204
F L+KN + RP+ EL++H
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQH 311
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
++P V + +W E G + + C G + + + + L E ++ +L L+AL
Sbjct: 115 QHPCCVRLEQAW-EEGGILYLQTELC-GPSLQQHCEAWGASL-PEAQVWGYLRDTLLALA 171
Query: 68 YLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADI 127
+LH+ ++H DVK +NIFL +LGDFGL L + G P YM PELL
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG- 230
Query: 128 PYGSKSDIWSLGCCIYEMT---SLKPAFKAFDMQALINKINKSIVAP-LPTKYSGAFRGL 183
YG+ +D++SLG I E+ L + + ++ + + P S R +
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGEGW------QQLRQGYLPPEFTAGLSSELRSV 284
Query: 184 VKSMLRKNPELRPSAAELL 202
+ ML +P+LR +A LL
Sbjct: 285 LVMMLEPDPKLRATAEALL 303
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 29/197 (14%)
Query: 33 CEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI 92
C D+ +KK S + E+ W +L A+ +H + I+H D+K +N FL D +
Sbjct: 109 CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGML 165
Query: 93 RLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSL 138
+L DFG+A + D + S VGT +YM PE + D+ ++ D+WSL
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 139 GCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGLVKSMLRKN 191
GC +Y MT K F Q +IN+I+K +I+ P P + ++K L+++
Sbjct: 226 GCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 280
Query: 192 PELRPSAAELLRHVHLQ 208
P+ R S ELL H ++Q
Sbjct: 281 PKQRISIPELLAHPYVQ 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 29/197 (14%)
Query: 33 CEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI 92
C D+ +KK S + E+ W +L A+ +H + I+H D+K +N FL D +
Sbjct: 109 CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGML 165
Query: 93 RLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSL 138
+L DFG+A + D + S VGT +YM PE + D+ ++ D+WSL
Sbjct: 166 KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 139 GCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGLVKSMLRKN 191
GC +Y MT K F Q +IN+I+K +I+ P P + ++K L+++
Sbjct: 226 GCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 280
Query: 192 PELRPSAAELLRHVHLQ 208
P+ R S ELL H ++Q
Sbjct: 281 PKQRISIPELLAHPYVQ 297
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 46/227 (20%)
Query: 33 CEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI 92
C D+ +KK S + E+ W +L A+ +H + I+H D+K +N FL D +
Sbjct: 93 CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGML 149
Query: 93 RLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSL 138
+L DFG+A + D + S VGT +YM PE + D+ ++ D+WSL
Sbjct: 150 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 209
Query: 139 GCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGLVKSMLRKN 191
GC +Y MT K F Q +IN+I+K +I+ P P + ++K L+++
Sbjct: 210 GCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 264
Query: 192 PELRPSAAELLRHVHLQ-----------------PYVLKVHLKLNSP 221
P+ R S ELL H ++Q YVL + LNSP
Sbjct: 265 PKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 311
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 18/233 (7%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV-Q 61
++S++ + I++ D + +G + ++ G D+ I + + +L +E L ++ Q
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-HPRL--DEPLASYIFRQ 138
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCP 121
L+ A+ YL I+HRD+K NI + +D I+L DFG A L L + GT Y P
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAP 198
Query: 122 ELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E+L PY G + ++WSLG +Y + + F + + ++ + P P S
Sbjct: 199 EVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE------ETVEAAIHP-PYLVSKEL 251
Query: 181 RGLVKSMLRKNPELRPSAAELL------RHVHLQPYVLKVHLKLNSPRRNSLS 227
LV +L+ PE R + +L+ + V+L Y + ++N P LS
Sbjct: 252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLS 304
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSK-LFSEEKLCKWLVQ 61
++ ++R+P IV + + V + + I+ + G + + K+ ++ E +
Sbjct: 87 IMKRLRHPNIVLFMGA-VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145
Query: 62 LLMALDYLHANH--ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS-SVVGTPSY 118
+ ++YLH + I+HRD+K N+ + K +++ DFGL+++ S L S GTP +
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEW 205
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKIN-KSIVAPLPTKYS 177
M PE+L D P KSD++S G ++E+ +L+ + + ++ + K +P +
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN 265
Query: 178 GAFRGLVKSMLRKNPELRPSAAELL 202
+++ P RPS A ++
Sbjct: 266 PQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
++P I+ KD + + G +V ++ GG++ + I + K FSE + L + ++
Sbjct: 79 QHPNIITLKDVY-DDGKHVYLVTELMRGGELLDKILR--QKFFSEREASFVLHTIGKTVE 135
Query: 68 YLHANHILHRDVKCSNIFLTKDQD----IRLGDFGLAKILTSDD-LASSVVGTPSYMCPE 122
YLH+ ++HRD+K SNI + +R+ DFG AK L +++ L + T +++ PE
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE 195
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFK---AFDMQALINKINK---SIVAPLPTKY 176
+L Y DIWSLG +Y M + F + + ++ +I ++
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV 255
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + LV ML +P R +A ++L+H
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+++ + GG++ + I K E + + Q+L A+DY H + ++HRD+K N+ L
Sbjct: 88 MVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 88 KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMT 146
+ ++ DFGL+ +++ + G+P+Y PE+++ Y G + DIWS G +Y +
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 147 SLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
F + L KI + +P + + L+ ML+ +P R + ++ H
Sbjct: 206 CGTLPFDDEHVPTLFKKIRGGVFY-IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 121/246 (49%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 321
Query: 251 YREKQY 256
R++ +
Sbjct: 322 PRDQSF 327
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 8 RNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALD 67
++P I+ KD + + G +V ++ GG++ + I + K FSE + L + ++
Sbjct: 79 QHPNIITLKDVY-DDGKHVYLVTELMRGGELLDKILR--QKFFSEREASFVLHTIGKTVE 135
Query: 68 YLHANHILHRDVKCSNIFLTKDQD----IRLGDFGLAKILTSDD-LASSVVGTPSYMCPE 122
YLH+ ++HRD+K SNI + +R+ DFG AK L +++ L + T +++ PE
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE 195
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFK---AFDMQALINKINK---SIVAPLPTKY 176
+L Y DIWSLG +Y M + F + + ++ +I ++
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV 255
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRH 204
S + LV ML +P R +A ++L+H
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P IV +K+ + ++ I++ + GG++ E I N+ FSE++ + QL+ +
Sbjct: 72 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLG--DFGLAKILTSDDLASSVVGTPSYMCPELL 124
Y HA + HRD+K N L RL FG +K S VGTP+Y+ PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 125 ADIPY-GSKSDIWSLGCCIYEMTSLKPAF----KAFDMQALINKI-NKSIVAPLPTKYSG 178
Y G +D+WS G +Y M F + + + I++I N P S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 179 AFRGLVKSMLRKNPELRPSAAELLRH 204
R L+ + +P R S E+ H
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 29/197 (14%)
Query: 33 CEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI 92
C D+ +KK S + E+ W +L A+ +H + I+H D+K +N FL D +
Sbjct: 89 CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGML 145
Query: 93 RLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSL 138
+L DFG+A + D + S VGT +YM PE + D+ ++ D+WSL
Sbjct: 146 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 205
Query: 139 GCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGLVKSMLRKN 191
GC +Y MT K F Q +IN+I+K +I+ P P + ++K L+++
Sbjct: 206 GCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 260
Query: 192 PELRPSAAELLRHVHLQ 208
P+ R S ELL H ++Q
Sbjct: 261 PKQRISIPELLAHPYVQ 277
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 5 SKIRNPFIVEYKDSW---VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+ + +P IV D+ G I++ + +G + + + + ++ + +
Sbjct: 84 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 141
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILT----SDDLASSVVGTPS 117
AL++ H N I+HRDVK +NI ++ +++ DFG+A+ + S ++V+GT
Sbjct: 142 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
Y+ PE ++SD++SLGC +YE+ + +P F ++ + + P ++
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 261
Query: 178 GA---FRGLVKSMLRKNPELRPSAAELLR 203
G +V L KNPE R A +R
Sbjct: 262 GLSADLDAVVLKALAKNPENRYQTAAEMR 290
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 47/235 (20%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNI 84
Y+ +++ C D+ +KK S + E+ W +L A+ +H + I+H D+K +N
Sbjct: 130 YIYMVME-CGNIDLNSWLKKKKS-IDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN- 185
Query: 85 FLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-------- 133
FL D ++L DFG+A + D + S VG +YM PE + D+ ++
Sbjct: 186 FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 134 ---DIWSLGCCIYEMTSLKPAFKAFDMQALINKINK--SIVAP-----LPTKYSGAFRGL 183
D+WSLGC +Y MT K F Q +IN+I+K +I+ P P + +
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 184 VKSMLRKNPELRPSAAELLRHVHLQ-----------------PYVLKVHLKLNSP 221
+K L+++P+ R S ELL H ++Q YVL + LNSP
Sbjct: 301 LKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 355
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
I++ + +G + + + + ++ + + AL++ H N I+HRDVK +NI ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 88 KDQDIRLGDFGLAKILT----SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIY 143
+++ DFG+A+ + S ++V+GT Y+ PE ++SD++SLGC +Y
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 144 EMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGA---FRGLVKSMLRKNPELRPSAAE 200
E+ + +P F ++ + + P ++ G +V L KNPE R A
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
Query: 201 LLR 203
+R
Sbjct: 271 EMR 273
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
++L+ ++ +P I+ D++ + + ++ F E E I K NS + + + +++
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSN-ISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYML 119
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
L L+YLH + ILHRD+K +N+ L ++ ++L DFGLAK S + A V T Y
Sbjct: 120 MTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYR 179
Query: 120 CPELLADI-PYGSKSDIWSLGCCIYEM 145
PELL YG D+W++GC + E+
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
E++ K+ +P +V+ +E+ +C++ F E G +++ ++ LF+ E L +
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLD 114
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SY 118
+ + YL ++HRD+ N + ++Q I++ DFG+ + + D SS GT +
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKW 173
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE+ + Y SKSD+WS G ++E+ S K ++ ++ I+ P S
Sbjct: 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 233
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHV 205
++ R+ PE RP+ + LLR +
Sbjct: 234 THVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ FCE D+A + K F+ ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 100 IYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 86 LTKDQDIRLGDFGLAKIL-----TSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLG 139
+T+D ++L DFGLA+ + + + V T Y PE LL + YG D+W G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 140 CCIYEMTSLKPAFKAFDMQ---ALINKINKSI 168
C + EM + P + Q ALI+++ SI
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 103/251 (41%), Gaps = 51/251 (20%)
Query: 35 GGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRL 94
G D+ + +K E+++ + Q+L L Y+HA I+HRD+K N+ + +D ++++
Sbjct: 113 GTDLGKLMKHEK---LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI 169
Query: 95 GDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFK 153
DFGLA+ +D V T Y PE++ + + Y DIWS+GC + EM + K FK
Sbjct: 170 LDFGLAR--QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227
Query: 154 AFDMQALINKINKSIVAP-------------------LP-----------TKYSGAFRGL 183
D + +I K P LP T S L
Sbjct: 228 GSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNL 287
Query: 184 VKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSPR-----------RNSLSHWPES 232
++ ML + E R +A E L H PY +H + P+ +L W
Sbjct: 288 LEKMLVLDAEQRVTAGEALAH----PYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKRV 343
Query: 233 NYARRTRFSEP 243
Y F P
Sbjct: 344 TYKEVLSFKPP 354
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
E++ K+ +P +V+ +E+ +C++ F E G +++ ++ LF+ E L +
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAP-ICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLD 112
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SY 118
+ + YL ++HRD+ N + ++Q I++ DFG+ + + D SS GT +
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKW 171
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE+ + Y SKSD+WS G ++E+ S K ++ ++ I+ P S
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 231
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHV 205
++ R+ PE RP+ + LLR +
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 51/257 (19%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 133 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 189
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTS 147
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+ +
Sbjct: 190 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
Query: 148 LKPAFKAFDMQALINKINK-------SIVAPLPT----------------KYSGAFRG-- 182
+ F D + +I + S+++ +P+ ++ F G
Sbjct: 248 GRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGAN 307
Query: 183 -----LVKSMLRKNPELRPSAAELLRHVHLQPYVLKVHLKLNSP-----------RRNSL 226
L++ ML + + R +A+E L H PY + H + P R+ +
Sbjct: 308 PLAVDLLEKMLVLDTDKRITASEALAH----PYFSQYHDPDDEPESEPYDQSFESRQLEI 363
Query: 227 SHWPESNYARRTRFSEP 243
W Y F P
Sbjct: 364 EEWKRLTYEEVCSFETP 380
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K S+ +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---SQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGL + +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DSELKILDFGLCR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI---LHRDVKCS 82
+C+++ F GG + + + K + L W VQ+ ++YLH I +HRD+K S
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 83 NIFLTK--------DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSD 134
NI + + ++ +++ DFGLA+ S+ G ++M PE++ + SD
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA-GAYAWMAPEVIRASMFSKGSD 196
Query: 135 IWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVA-PLPTKYSGAFRGLVKSMLRKNPE 193
+WS G ++E+ + + F+ D A+ + + +A P+P+ F L++ +P
Sbjct: 197 VWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPH 256
Query: 194 LRPSAAELLRHV 205
RPS +L +
Sbjct: 257 SRPSFTNILDQL 268
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 106 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 279
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 280 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 322
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 109 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 282
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 283 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 325
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 110 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 283
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 284 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 326
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
E++ K+ +P +V+ +E+ +C++ F E G +++ ++ LF+ E L +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLD 111
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SY 118
+ + YL ++HRD+ N + ++Q I++ DFG+ + + D SS GT +
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKW 170
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE+ + Y SKSD+WS G ++E+ S K ++ ++ I+ P S
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 230
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHV 205
++ ++ PE RP+ + LLR +
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 109 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 282
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 283 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 325
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 115 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 171
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 172 DXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 288
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 289 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 331
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K A +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 100 LVTHLMGADLNNIVKCAK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 273
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 274 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 317
Query: 251 YREKQY 256
++ +
Sbjct: 318 PYDQSF 323
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 7 IRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMAL 66
+R+P IV +K+ + ++ I++ + GG++ E I N+ FSE++ + QL+ +
Sbjct: 72 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 67 DYLHANHILHRDVKCSNIFLTKDQDIRLG--DFGLAKILTSDDLASSVVGTPSYMCPELL 124
Y HA + HRD+K N L RL FG +K VGTP+Y+ PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 125 ADIPY-GSKSDIWSLGCCIYEMTSLKPAF----KAFDMQALINKI-NKSIVAPLPTKYSG 178
Y G +D+WS G +Y M F + + + I++I N P S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 179 AFRGLVKSMLRKNPELRPSAAELLRH 204
R L+ + +P R S E+ H
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 321
Query: 251 YREKQY 256
+++ +
Sbjct: 322 PQDQSF 327
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ FCE D+A + K F+ ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 99 IYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 156
Query: 86 LTKDQDIRLGDFGLAKIL-----TSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLG 139
+T+D ++L DFGLA+ + + + V T Y PE LL + YG D+W G
Sbjct: 157 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 216
Query: 140 CCIYEMTSLKPAFKAFDMQ---ALINKINKSI 168
C + EM + P + Q ALI+++ SI
Sbjct: 217 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
E++ K+ +P +V+ +E+ +C++ F E G +++ ++ LF+ E L +
Sbjct: 52 EVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLD 109
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SY 118
+ + YL ++HRD+ N + ++Q I++ DFG+ + + D SS GT +
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKW 168
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE+ + Y SKSD+WS G ++E+ S K ++ ++ I+ P S
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 228
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHV 205
++ ++ PE RP+ + LLR +
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
E++ K+ +P +V+ +E+ +C++ F E G +++ ++ LF+ E L +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLD 111
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SY 118
+ + YL ++HRD+ N + ++Q I++ DFG+ + + D SS GT +
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKW 170
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE+ + Y SKSD+WS G ++E+ S K ++ ++ I+ P S
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 230
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHV 205
++ ++ PE RP+ + LLR +
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 110 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 283
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 284 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 326
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 110 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 283
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 284 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 326
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ FCE D+A + K F+ ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 100 IYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 86 LTKDQDIRLGDFGLAKIL-----TSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLG 139
+T+D ++L DFGLA+ + + + V T Y PE LL + YG D+W G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 140 CCIYEMTSLKPAFKAFDMQ---ALINKINKSI 168
C + EM + P + Q ALI+++ SI
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ FCE D+A + K F+ ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 100 IYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 86 LTKDQDIRLGDFGLAKIL-----TSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLG 139
+T+D ++L DFGLA+ + + + V T Y PE LL + YG D+W G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 140 CCIYEMTSLKPAFKAFDMQ---ALINKINKSI 168
C + EM + P + Q ALI+++ SI
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 109 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 282
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 283 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 325
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 103 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 159
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 160 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 218 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 276
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 277 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 319
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 106 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 279
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 280 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 322
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
E++ K+ +P +V+ +E+ +C++ F E G +++ ++ LF+ E L +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLD 131
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SY 118
+ + YL ++HRD+ N + ++Q I++ DFG+ + + D SS GT +
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKW 190
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTS-LKPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE+ + Y SKSD+WS G ++E+ S K ++ ++ I+ P S
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 250
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHV 205
++ ++ PE RP+ + LLR +
Sbjct: 251 THVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 106 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 279
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 280 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 322
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 106 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 279
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 280 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 322
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK-WLVQLLMALDYLHANHILHRDVKCSN 83
Y+ +++ + GGD+ + + EK K + ++++ALD +H+ ++HRDVK N
Sbjct: 149 YLYMVMEYMPGGDLVNLMSNYDVP----EKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN 204
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWS 137
+ L K ++L DFG + + + VGTP Y+ PE+L D YG + D WS
Sbjct: 205 MLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 264
Query: 138 LGCCIYEMTSLKPAFKAFDMQALINKI 164
+G ++EM F A + +KI
Sbjct: 265 VGVFLFEMLVGDTPFYADSLVGTYSKI 291
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 115 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 171
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 172 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 288
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 289 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 331
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 123 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 180 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 296
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 297 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 339
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 110 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 283
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 284 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 326
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 116 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 173 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 289
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 290 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 332
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 116 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 173 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 289
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 290 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 332
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 111 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 284
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 285 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 327
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 116 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 173 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 289
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 290 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 332
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 321
Query: 251 YREKQY 256
++ +
Sbjct: 322 PTDQSF 327
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 114 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 170
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 171 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 229 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 287
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 288 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 330
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 124 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 181 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 297
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 298 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 340
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 109 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 282
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 283 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 325
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 123 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 180 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 296
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 297 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 339
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 124 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 181 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 297
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 298 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 340
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 101 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 158 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 274
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 275 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 317
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 321
Query: 251 YREKQY 256
++ +
Sbjct: 322 PYDQSF 327
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 127 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 184 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 300
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 301 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 343
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 100 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 273
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 274 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 317
Query: 251 YREKQY 256
++ +
Sbjct: 318 PYDQSF 323
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 101 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 158 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 274
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 275 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 318
Query: 251 YREKQY 256
++ +
Sbjct: 319 PYDQSF 324
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 102 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 158
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 159 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 217 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 275
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 276 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 319
Query: 251 YREKQY 256
++ +
Sbjct: 320 PYDQSF 325
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 100 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 273
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 274 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 317
Query: 251 YREKQY 256
++ +
Sbjct: 318 PYDQSF 323
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 31/216 (14%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKL---FSEEKLCKWLVQLLMALDY 68
+V Y +W E ++ I +C GG +A+AI + N ++ F E +L L+Q+ L Y
Sbjct: 69 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVGRGLRY 126
Query: 69 LHANHILHRDVKCSNIFLTK-----------DQD--------IRLGDFGLAKILTSDDLA 109
+H+ ++H D+K SNIF+++ D+D ++GD G ++S +
Sbjct: 127 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 186
Query: 110 SSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI 168
G ++ E+L + + K+DI++L + +P + D ++I +
Sbjct: 187 E---GDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQW---HEIRQGR 240
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ +P S F L+K M+ +PE RPSA L++H
Sbjct: 241 LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 100 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 273
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 274 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 316
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
III F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY-VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
+E++ + + IV+YK E G + +I+ F G + E + K +K+ +++L K+
Sbjct: 74 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL-KYA 132
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVV---GTP 116
VQ+ +DYL + +HRD+ N+ + + +++GDFGL K + +D +V +P
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 117 SY-MCPELLADIPYGSKSDIWSLGCCIYEMTS---------------LKPAFKAFDMQAL 160
+ PE L + SD+WS G ++E+ + + P + L
Sbjct: 193 VFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252
Query: 161 INKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
+N + + P P V ++RK E +PS
Sbjct: 253 VNTLKEGKRLPCPPNCPDE----VYQLMRKCWEFQPS 285
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 127 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 184 DCELKILDFGLAR--HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 300
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 301 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 343
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY-VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
+E++ + + IV+YK E G + +I+ F G + E + K +K+ +++L K+
Sbjct: 62 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL-KYA 120
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVV---GTP 116
VQ+ +DYL + +HRD+ N+ + + +++GDFGL K + +D +V +P
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 117 SY-MCPELLADIPYGSKSDIWSLGCCIYEMTS---------------LKPAFKAFDMQAL 160
+ PE L + SD+WS G ++E+ + + P + L
Sbjct: 181 VFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 240
Query: 161 INKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
+N + + P P V ++RK E +PS
Sbjct: 241 VNTLKEGKRLPCPPNCPDE----VYQLMRKCWEFQPS 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
III F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 40/246 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 124 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ +DD V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 181 DCELKILDFGLAR--HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LAQMPKMNFANVFIGA 297
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPISS 250
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 298 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVAD 341
Query: 251 YREKQY 256
++ +
Sbjct: 342 PYDQSF 347
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 52 EEKLCKWLVQLLMALDYLHAN-HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLAS 110
E+ L K V ++ AL++LH+ ++HRDVK SN+ + ++ DFG++ L DD+A
Sbjct: 135 EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV-DDVAK 193
Query: 111 SV-VGTPSYMCPEL----LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKIN 165
+ G Y PE L Y KSDIWSLG E+ L+ + ++ ++
Sbjct: 194 DIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTP--FQQLK 251
Query: 166 KSIVAPLPT----KYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ + P P K+S F L+KN + RP+ EL +H
Sbjct: 252 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQH 294
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ D+GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDYGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
V II+ C G++ ++K + L S L + QL AL YL + +HRD+ N
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLAS---LILYAYQLSTALAYLESKRFVHRDIAARN 521
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCC 141
+ ++ + ++LGDFGL++ + + G +M PE + + S SD+W G C
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 142 IYE--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E M +KP F+ +I +I P+P L+ +P RP
Sbjct: 582 MWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 640
Query: 200 EL 201
EL
Sbjct: 641 EL 642
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 10/191 (5%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ +C GG++ + I + SEE+ Q++ A+ Y+H+ HRD+K N+
Sbjct: 83 IFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLL 140
Query: 86 LTKDQDIRLGDFGL-AKILTSDDL-ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCI 142
+ ++L DFGL AK + D + G+ +Y PEL+ Y GS++D+WS+G +
Sbjct: 141 FDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 143 YEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
Y + F ++ AL KI + +P S + L++ ML+ +P+ R S LL
Sbjct: 201 YVLMCGFLPFDDDNVMALYKKIMRG-KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
Query: 203 RHVHLQPYVLK 213
H P++++
Sbjct: 260 NH----PWIMQ 266
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 31/198 (15%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 171
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 176 YSGAF----------------------------RGLVKSMLRKNPELRPSAAELLRHVHL 207
+ G R L+ ML +P R SA L H
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 208 QPYVLKV-HLKLNSPRRN 224
Q V HL+L P R+
Sbjct: 292 QDVTKPVPHLRLERPHRD 309
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
V II+ C G++ ++K + L S L + QL AL YL + +HRD+ N
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLAS---LILYAYQLSTALAYLESKRFVHRDIAARN 144
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCC 141
+ ++ + ++LGDFGL++ + + G +M PE + + S SD+W G C
Sbjct: 145 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 204
Query: 142 IYE--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E M +KP F+ +I +I P+P L+ +P RP
Sbjct: 205 MWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 263
Query: 200 EL 201
EL
Sbjct: 264 EL 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
V II+ C G++ ++K + L S L + QL AL YL + +HRD+ N
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLAS---LILYAYQLSTALAYLESKRFVHRDIAARN 143
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCC 141
+ ++ + ++LGDFGL++ + + G +M PE + + S SD+W G C
Sbjct: 144 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 203
Query: 142 IYE--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E M +KP F+ +I +I P+P L+ +P RP
Sbjct: 204 MWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 262
Query: 200 EL 201
EL
Sbjct: 263 EL 264
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 28 IIIGFCEGGDMAEAIKK-ANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFL 86
+ + +CEGGD+ + + + N E + L + AL YLH N I+HRD+K NI L
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 87 TKD-QDI--RLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIY 143
Q + ++ D G AK L +L + VGT Y+ PELL Y D WS G +
Sbjct: 156 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 215
Query: 144 E-MTSLKPAFKAFD------------------MQALINKINKSIVAPLPTKYSGAFRGLV 184
E +T +P + L + S V P P SG G +
Sbjct: 216 ECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKL 275
Query: 185 KSMLR 189
+ L+
Sbjct: 276 ERWLQ 280
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 28 IIIGFCEGGDMAEAIKK-ANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFL 86
+ + +CEGGD+ + + + N E + L + AL YLH N I+HRD+K NI L
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 87 TKD-QDI--RLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIY 143
Q + ++ D G AK L +L + VGT Y+ PELL Y D WS G +
Sbjct: 155 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 214
Query: 144 E-MTSLKPAFKAFD------------------MQALINKINKSIVAPLPTKYSGAFRGLV 184
E +T +P + L + S V P P SG G +
Sbjct: 215 ECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKL 274
Query: 185 KSMLR 189
+ L+
Sbjct: 275 ERWLQ 279
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D I N KLF L QLL L Y H +LHRD+K N+ + + +++L D
Sbjct: 92 DCGNIINMHNVKLF--------LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLAD 143
Query: 97 FGL--AKILTSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFK 153
FGL AK + + + VV T Y P+ LL Y ++ D+W +GC YEM + +P F
Sbjct: 144 FGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP 202
Query: 154 AFDMQALINKINKSIVAPLPTKYSGAF-----------RGLVKSMLRKNPELRPSAAELL 202
++ ++ I + + P + G + +++L P L A+LL
Sbjct: 203 GSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLL 262
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 31/216 (14%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKL---FSEEKLCKWLVQLLMALDY 68
+V Y +W E ++ I +C GG +A+AI + N ++ F E +L L+Q+ L Y
Sbjct: 71 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVGRGLRY 128
Query: 69 LHANHILHRDVKCSNIFLTK-----------DQD--------IRLGDFGLAKILTSDDLA 109
+H+ ++H D+K SNIF+++ D+D ++GD G ++S +
Sbjct: 129 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 188
Query: 110 SSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI 168
G ++ E+L + + K+DI++L + +P + D ++I +
Sbjct: 189 E---GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGR 242
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ +P S F L+K M+ +PE RPSA L++H
Sbjct: 243 LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
III F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 91 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
V II+ C G++ ++K + L S L + QL AL YL + +HRD+ N
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLAS---LILYAYQLSTALAYLESKRFVHRDIAARN 138
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCC 141
+ ++ + ++LGDFGL++ + + G +M PE + + S SD+W G C
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 142 IYE--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E M +KP F+ +I +I P+P L+ +P RP
Sbjct: 199 MWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 257
Query: 200 EL 201
EL
Sbjct: 258 EL 259
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
III F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 87 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 146
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 147 ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 207 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 31/216 (14%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKL---FSEEKLCKWLVQLLMALDY 68
+V Y +W E ++ I +C GG +A+AI + N ++ F E +L L+Q+ L Y
Sbjct: 71 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVGRGLRY 128
Query: 69 LHANHILHRDVKCSNIFLTK-----------DQD--------IRLGDFGLAKILTSDDLA 109
+H+ ++H D+K SNIF+++ D+D ++GD G ++S +
Sbjct: 129 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 188
Query: 110 SSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI 168
G ++ E+L + + K+DI++L + +P + D ++I +
Sbjct: 189 E---GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGR 242
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ +P S F L+K M+ +PE RPSA L++H
Sbjct: 243 LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
V II+ C G++ ++K + L S L + QL AL YL + +HRD+ N
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLAS---LILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCC 141
+ ++ + ++LGDFGL++ + + G +M PE + + S SD+W G C
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 201
Query: 142 IYE--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E M +KP F+ +I +I P+P L+ +P RP
Sbjct: 202 MWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
Query: 200 EL 201
EL
Sbjct: 261 EL 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V II+ C G++ ++ L L + QL AL YL + +HRD+ N+
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRDIAARNVL 171
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIY 143
++ + ++LGDFGL++ + + G +M PE + + S SD+W G C++
Sbjct: 172 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 231
Query: 144 E--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
E M +KP F+ +I +I P+P L+ +P RP EL
Sbjct: 232 EILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V II+ C G++ ++ L L + QL AL YL + +HRD+ N+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRDIAARNVL 143
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIY 143
++ + ++LGDFGL++ + + G +M PE + + S SD+W G C++
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 144 E--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
E M +KP F+ +I +I P+P L+ +P RP EL
Sbjct: 204 EILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V II+ C G++ ++ L L + QL AL YL + +HRD+ N+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRDIAARNVL 143
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIY 143
++ + ++LGDFGL++ + + G +M PE + + S SD+W G C++
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 144 E--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
E M +KP F+ +I +I P+P L+ +P RP EL
Sbjct: 204 EILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
V II+ C G++ ++K + L S L + QL AL YL + +HRD+ N
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLAS---LILYAYQLSTALAYLESKRFVHRDIAARN 521
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCC 141
+ ++ ++LGDFGL++ + + G +M PE + + S SD+W G C
Sbjct: 522 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 142 IYE--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E M +KP F+ +I +I P+P L+ +P RP
Sbjct: 582 MWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 640
Query: 200 EL 201
EL
Sbjct: 641 EL 642
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 5 SKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLM 64
S++ + IV D E CY +++ + EG ++E I+ S + + Q+L
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCY-YLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILD 122
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASS--VVGTPSYMCPE 122
+ + H I+HRD+K NI + ++ +++ DFG+AK L+ L + V+GT Y PE
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKA 154
+DI+S+G +YEM +P F
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V II+ C G++ ++ L L + QL AL YL + +HRD+ N+
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRDIAARNVL 148
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIY 143
++ + ++LGDFGL++ + + G +M PE + + S SD+W G C++
Sbjct: 149 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 208
Query: 144 E--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
E M +KP F+ +I +I P+P L+ +P RP EL
Sbjct: 209 EILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 31/216 (14%)
Query: 12 IVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKL---FSEEKLCKWLVQLLMALDY 68
+V Y +W E ++ I +C GG +A+AI + N ++ F E +L L+Q+ L Y
Sbjct: 73 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVGRGLRY 130
Query: 69 LHANHILHRDVKCSNIFLTK-----------DQD--------IRLGDFGLAKILTSDDLA 109
+H+ ++H D+K SNIF+++ D+D ++GD G ++S +
Sbjct: 131 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 190
Query: 110 SSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI 168
G ++ E+L + + K+DI++L + +P + D ++I +
Sbjct: 191 E---GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGR 244
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+ +P S F L+K M+ +PE RPSA L++H
Sbjct: 245 LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 111 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ T+D++ + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLAR-HTADEM-TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 284
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 285 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 327
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + S L Q+ A++YL + +HR++ N +
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 111 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ T+D++ + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLAR-HTADEM-TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 284
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 285 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 327
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 111 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DFGLA+ T+D++ + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLAR-HTADEM-TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 284
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 285 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 327
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
+P IV+ + + ++ + +++ GG++ E IKK K FSE + + +L+ A+ +
Sbjct: 65 HPNIVKLHEVFHDQ-LHTFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSH 121
Query: 69 LHANHILHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDL-ASSVVGTPSYMCPELL 124
+H ++HRD+K N+ T + D I++ DFG A++ D+ + T Y PELL
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL 181
Query: 125 ADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFD 156
Y D+WSLG +Y M S + F++ D
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ FGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILGFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ FC+ D+ + N L E + +L QLL L + H+ ++LHRD+K N+
Sbjct: 76 LTLVFEFCDQ-DLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 86 LTKDQDIRLGDFGLAKIL-TSDDLASSVVGTPSYMCPELLADIP-YGSKSDIWSLGCCIY 143
+ ++ +++L DFGLA+ S+ V T Y P++L Y + D+WS GC
Sbjct: 134 INRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 144 EMT-SLKPAFKAFDMQALINKINKSIVAP----------LPT------------------ 174
E+ + +P F D+ + +I + + P LP
Sbjct: 194 ELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
K + R L++++L+ NP R SA E L+H + +
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 38/244 (15%)
Query: 1 MELISKIRNPFIVEYKDSWV---ERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
+ L++ +P I+ +D +V E + ++ D+A+ I + S + +
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQY 138
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
++ +L+ L LH ++HRD+ NI L + DI + DF LA+ T+D + V
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW 198
Query: 118 YMCPELLADIPYGSK-SDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAP----- 171
Y PEL+ +K D+WS GC + EM + K F+ +NKI + + P
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 172 ---------------------------LPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+PT A L+ ML NP+ R S + LRH
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL-DLIAKMLEFNPQRRISTEQALRH 317
Query: 205 VHLQ 208
+ +
Sbjct: 318 PYFE 321
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 25 YVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNI 84
Y+ +++ + GGD+ + K ++ +E +L +++MA+D +H +HRD+K NI
Sbjct: 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARF-YLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 85 FLTKDQDIRLGDFGLAKILTSDDLASSV--VGTPSYMCPELLADIPYGS-------KSDI 135
L + IRL DFG L +D S+ VGTP Y+ PE+L + G + D
Sbjct: 194 LLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDW 253
Query: 136 WSLGCCIYEMTSLKPAFKA 154
W+LG YEM + F A
Sbjct: 254 WALGVFAYEMFYGQTPFYA 272
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
V II+ C G++ ++K + L S L + QL AL YL + +HRD+ N
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLAS---LILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCC 141
+ ++ ++LGDFGL++ + + G +M PE + + S SD+W G C
Sbjct: 142 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 201
Query: 142 IYE--MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E M +KP F+ +I +I P+P L+ +P RP
Sbjct: 202 MWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
Query: 200 EL 201
EL
Sbjct: 261 EL 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
III F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 84 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 143
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 144 ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D + + K P L+++ + NP RPS AE+
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ DF LA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFYLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ L+ ++ +P IV D C + ++ F E D+ + + + + L + ++ +L
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERC-LTLVFEFMEK-DLKKVLDENKTGL-QDSQIKIYLY 126
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
QLL + + H + ILHRD+K N+ + D ++L DFGLA+ + + V T Y
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
Query: 120 CPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKY 176
P+ L+ Y + DIWS+GC EM + KP F + KI + P P ++
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HR++ N +
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 391
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 392 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 452 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 38/244 (15%)
Query: 1 MELISKIRNPFIVEYKDSWV---ERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
+ L++ +P I+ +D +V E + ++ D+A+ I + S + +
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQY 138
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPS 117
++ +L+ L LH ++HRD+ NI L + DI + DF LA+ T+D + V
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW 198
Query: 118 YMCPELLADIPYGSK-SDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAP----- 171
Y PEL+ +K D+WS GC + EM + K F+ +NKI + + P
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 172 ---------------------------LPTKYSGAFRGLVKSMLRKNPELRPSAAELLRH 204
+PT A L+ ML NP+ R S + LRH
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL-DLIAKMLEFNPQRRISTEQALRH 317
Query: 205 VHLQ 208
+ +
Sbjct: 318 PYFE 321
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ D GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDAGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+ L+ ++ +P IV D C + ++ F E D+ + + + + L + ++ +L
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERC-LTLVFEFMEK-DLKKVLDENKTGL-QDSQIKIYLY 126
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-SSVVGTPSYM 119
QLL + + H + ILHRD+K N+ + D ++L DFGLA+ + + V T Y
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
Query: 120 CPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKY 176
P+ L+ Y + DIWS+GC EM + KP F + KI + P P ++
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HR++ N +
Sbjct: 290 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 349
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 350 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 410 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ D GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDGGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ G D+ +K + +++ + + Q+L L Y+H+ I+HRD+K SN+ + +
Sbjct: 104 LVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 89 DQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCIYEMT- 146
D ++++ D GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDRGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 147 --SLKPAFKAFDMQALINKINKSIVAPLPTKYSG-AFRGLVKSMLRKNPEL--------- 194
+L P D LI ++ + A L K S + R ++S L + P++
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGA 277
Query: 195 RPSAAELLRHVHLQPYVLKVHLKLNSPRR----NSLSHWPESNYARRTRFSEPDNVPIS 249
P A +LL + L L+S +R +L+H A ++ +PD+ P++
Sbjct: 278 NPLAVDLLEKM----------LVLDSDKRITAAQALAH------AYFAQYHDPDDEPVA 320
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 147
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 148 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 208 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 90 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 149
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 210 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 99 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 158
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 159 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 219 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + + +R + +++ F G++ + ++K F E++ ++
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGR--FDEQRSATFME 122
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H ++HRD+K N+ + ++++ DFG + + + GT Y+
Sbjct: 123 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLP 181
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+W G YE P F + +I ++ P S
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPPFLSDGS 240
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
+ L+ +LR +P R ++ H
Sbjct: 241 KDLISKLLRYHPPQRLPLKGVMEH 264
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 147
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 148 ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 208 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 87 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 146
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 147 ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 207 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
+++++R+ +V+ VE + I+ + G + + ++ + + L K+ + +
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 117
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
A++YL N+ +HRD+ N+ +++D ++ DFGL K +S + + PE
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPE 175
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
L + + +KSD+WS G ++E+ S + + ++ ++ ++ K P A
Sbjct: 176 ALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY 235
Query: 182 GLVKSMLRKNPELRPSAAEL---LRHV 205
++K+ + +RPS +L L H+
Sbjct: 236 EVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 147
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 148 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 208 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + + +R + +++ F G++ + ++K F E++ ++
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGR--FDEQRSATFME 121
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H ++HRD+K N+ + ++++ DFG + + + GT Y+
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLP 180
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+W G YE P F + +I ++ P S
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPPFLSDGS 239
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
+ L+ +LR +P R ++ H
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ S +R+P I+ + + +R + +++ F G++ + ++K F E++ ++
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGR--FDEQRSATFME 121
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H ++HRD+K N+ + ++++ DFG + + + GT Y+
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLP 180
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+W G YE P F + +I ++ P S
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPPFLSDGS 239
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
+ L+ +LR +P R ++ H
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ F G + E ++K ++ K
Sbjct: 65 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEFLPYGSLREYLQKHKERI-DHIK 118
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 119 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 177
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 143
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 144 ENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D + + K P L+++ + NP RPS AE+
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 76/246 (30%)
Query: 35 GGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFL-------- 86
G + E I + N F E + + +++L AL+YL + H D+K NI L
Sbjct: 119 GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS 178
Query: 87 -----------------TKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY 129
TK I+L DFG A D S++ T Y PE++ ++ +
Sbjct: 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF--KSDYHGSIINTRQYRAPEVILNLGW 236
Query: 130 GSKSDIWSLGCCIYEMTSLKPAFKAFD-MQALINKINKSIVAPLP-------TKYSGA-- 179
SD+WS GC + E+ + F+ + M+ L + +SI+ P+P TK +G+
Sbjct: 237 DVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL--AMMESIIQPIPKNMLYEATKTNGSKY 294
Query: 180 -------------------------------------FRGLVKSMLRKNPELRPSAAELL 202
F + S+L+ +P LRPS AELL
Sbjct: 295 VNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELL 354
Query: 203 RHVHLQ 208
+H L+
Sbjct: 355 KHKFLE 360
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 43/208 (20%)
Query: 46 NSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS 105
++++ S++ + ++ Q L A+ LH ++++HRD+K SN+ + + D+++ DFGLA+I+
Sbjct: 105 STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 106 DDLASS-----------VVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFK 153
+S V T Y PE +L Y D+WS GC + E+ +P F
Sbjct: 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 154 AFDMQALINKINKSIVAP--------------------LPTKYSGAFR-----------G 182
D + + I I P LP +
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGID 284
Query: 183 LVKSMLRKNPELRPSAAELLRHVHLQPY 210
L++ ML +P R +A E L H +LQ Y
Sbjct: 285 LLQRMLVFDPAKRITAKEALEHPYLQTY 312
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLV 60
+E+ + + +P I+ + + +R + +I+ + G++ + ++K+ + F E++ +
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRR-RIYLILEYAPRGELYKELQKSCT--FDEQRTATIME 130
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L AL Y H ++HRD+K N+ L ++++ DFG + + ++ GT Y+
Sbjct: 131 ELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLP 189
Query: 121 PELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
PE++ + K D+W +G YE+ P F++ +I K + P
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK-VDLKFPASVPTGA 248
Query: 181 RGLVKSMLRKNPELRPSAAELLRH 204
+ L+ +LR NP R A++ H
Sbjct: 249 QDLISKLLRHNPSERLPLAQVSAH 272
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 43/208 (20%)
Query: 46 NSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS 105
++++ S++ + ++ Q L A+ LH ++++HRD+K SN+ + + D+++ DFGLA+I+
Sbjct: 105 STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 106 DDLASS-----------VVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFK 153
+S V T Y PE +L Y D+WS GC + E+ +P F
Sbjct: 165 SAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 154 AFDMQALINKINKSIVAP--------------------LPTKYSGAFR-----------G 182
D + + I I P LP +
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGID 284
Query: 183 LVKSMLRKNPELRPSAAELLRHVHLQPY 210
L++ ML +P R +A E L H +LQ Y
Sbjct: 285 LLQRMLVFDPAKRITAKEALEHPYLQTY 312
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 43/208 (20%)
Query: 46 NSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS 105
++++ S++ + ++ Q L A+ LH ++++HRD+K SN+ + + D+++ DFGLA+I+
Sbjct: 105 STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 106 DDLASS-----------VVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAFK 153
+S V T Y PE +L Y D+WS GC + E+ +P F
Sbjct: 165 SAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 154 AFDMQALINKINKSIVAP--------------------LPTKYSGAFR-----------G 182
D + + I I P LP +
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGID 284
Query: 183 LVKSMLRKNPELRPSAAELLRHVHLQPY 210
L++ ML +P R +A E L H +LQ Y
Sbjct: 285 LLQRMLVFDPAKRITAKEALEHPYLQTY 312
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
+++++R+ +V+ VE + I+ + G + + ++ + + L K+ + +
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
A++YL N+ +HRD+ N+ +++D ++ DFGL K +S + + PE
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPE 184
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
L + + +KSD+WS G ++E+ S + + ++ ++ ++ K P A
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY 244
Query: 182 GLVKSMLRKNPELRPSAAEL---LRHV 205
++K+ + +RPS +L L H+
Sbjct: 245 EVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
+++++R+ +V+ VE + I+ + G + + ++ + + L K+ + +
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 111
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
A++YL N+ +HRD+ N+ +++D ++ DFGL K +S + + PE
Sbjct: 112 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPE 169
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
L + + +KSD+WS G ++E+ S + + ++ ++ ++ K P A
Sbjct: 170 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY 229
Query: 182 GLVKSMLRKNPELRPSAAEL---LRHV 205
++K+ + +RPS +L L H+
Sbjct: 230 EVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ ++ FC+ D+ + N L E + +L QLL L + H+ ++LHRD+K N+
Sbjct: 76 LTLVFEFCDQ-DLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 86 LTKDQDIRLGDFGLAKIL-TSDDLASSVVGTPSYMCPELLADIP-YGSKSDIWSLGCCIY 143
+ ++ +++L +FGLA+ S+ V T Y P++L Y + D+WS GC
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 144 EMTSL-KPAFKAFDMQALINKINKSIVAP----------LPT------------------ 174
E+ + +P F D+ + +I + + P LP
Sbjct: 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPY 210
K + R L++++L+ NP R SA E L+H + +
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 62 LLMALDYLH-ANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMC 120
+L + Y+H +I HRDVK SNI + K+ ++L DFG ++ + + S GT +M
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS-RGTYEFMP 218
Query: 121 PELLADIP--YGSKSDIWSLGCCIYEM-TSLKPAFKAFDMQALINKI-NKSIVAPLPTKY 176
PE ++ G+K DIWSLG C+Y M ++ P + L N I K+I PL +
Sbjct: 219 PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNH 278
Query: 177 ------------SGAFRG-----LVKSMLRKNPELRPSAAELLRH 204
S F +K LRKNP R ++ + L+H
Sbjct: 279 FLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
II F G++ + +++ N + S L Q+ A++YL + +HRD+ N +
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 143
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 144 ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+ + + D + + K P L+++ + NP RPS AE+
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
+++++R+ +V+ VE + I+ + G + + ++ + + L K+ + +
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 298
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPE 122
A++YL N+ +HRD+ N+ +++D ++ DFGL K +S + + PE
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPE 356
Query: 123 LLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
L + + +KSD+WS G ++E+ S + + ++ ++ ++ K P A
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY 416
Query: 182 GLVKSMLRKNPELRPSAAEL---LRHV 205
++K+ + RP+ +L L H+
Sbjct: 417 DVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 49/213 (23%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ CEGG ++ +K F L+QLL + Y H +LHRD+K N+ + +
Sbjct: 89 LLDVCEGG-----LESVTAKSF--------LLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135
Query: 89 DQDIRLGDFGLAKI--LTSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEM 145
+ ++++ DFGLA+ + VV T Y P+ L+ Y + DIWS+GC EM
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Query: 146 TSLKPAFKAFDMQALINKI-----------------------NKSIVAPLPTKYSGAFRG 182
+ P F + +I N ++ PLP + +G
Sbjct: 195 VNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP--WESFLKG 252
Query: 183 LVKS-------MLRKNPELRPSAAELLRHVHLQ 208
L +S ML+ +P R +A + L H + +
Sbjct: 253 LDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 49/213 (23%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ CEGG ++ +K F L+QLL + Y H +LHRD+K N+ + +
Sbjct: 89 LLDVCEGG-----LESVTAKSF--------LLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135
Query: 89 DQDIRLGDFGLAKI--LTSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEM 145
+ ++++ DFGLA+ + VV T Y P+ L+ Y + DIWS+GC EM
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Query: 146 TSLKPAFKAFDMQALINKI-----------------------NKSIVAPLPTKYSGAFRG 182
+ P F + +I N ++ PLP + +G
Sbjct: 195 VNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP--WESFLKG 252
Query: 183 LVKS-------MLRKNPELRPSAAELLRHVHLQ 208
L +S ML+ +P R +A + L H + +
Sbjct: 253 LDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 108 YLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 235 WPG-----VTSM----PDYKPS 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 49/213 (23%)
Query: 29 IIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTK 88
++ CEGG ++ +K F L+QLL + Y H +LHRD+K N+ + +
Sbjct: 89 LLDVCEGG-----LESVTAKSF--------LLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135
Query: 89 DQDIRLGDFGLAKI--LTSDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEM 145
+ ++++ DFGLA+ + +V T Y P+ L+ Y + DIWS+GC EM
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Query: 146 TSLKPAFKAFDMQALINKI-----------------------NKSIVAPLPTKYSGAFRG 182
+ P F + +I N ++ PLP + +G
Sbjct: 195 VNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP--WESFLKG 252
Query: 183 LVKS-------MLRKNPELRPSAAELLRHVHLQ 208
L +S ML+ +P R +A + L H + +
Sbjct: 253 LDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 227 WPG-----VTSM----PDYKPS 239
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 168
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 229 WPG-----VTSM----PDYKPS 241
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 227 WPG-----VTSM----PDYKPS 239
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 235 WPG-----VTSM----PDYKPS 247
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 227 WPG-----VTSM----PDYKPS 239
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ + V T
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 227 WPG-----VTSM----PDYKPS 239
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 20 VERGCYVCIIIGFCEGGDMAEAIKK-----ANSKLFSEEKLCKWLVQLLM----ALDYLH 70
V +G +I+ GD+ ++ AN+ + + L K ++Q+ + YL+
Sbjct: 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK-MIQMAGEIADGMAYLN 155
Query: 71 ANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCPELLADI 127
AN +HRD+ N + +D +++GDFG+ + + D + +M PE L D
Sbjct: 156 ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG 215
Query: 128 PYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKS 186
+ + SD+WS G ++E+ +L + ++ + ++ + + + P L++
Sbjct: 216 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM 275
Query: 187 MLRKNPELRPSAAELLRHV 205
+ NP++RPS E++ +
Sbjct: 276 CWQYNPKMRPSFLEIISSI 294
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 135 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 254
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 255 LELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 144 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 263
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 264 FELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 230 WPG-----VTSM----PDYKPS 242
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 230 WPG-----VTSM----PDYKPS 242
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 231 WPG-----VTSM----PDYKPS 243
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 229 WPG-----VTSM----PDYKPS 241
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 231 WPG-----VTSM----PDYKPS 243
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 230 WPG-----VTSM----PDYKPS 242
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 231 WPG-----VTSM----PDYKPS 243
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 231 WPG-----VTSM----PDYKPS 243
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 229 WPG-----VTSM----PDYKPS 241
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 137 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 256
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 257 FELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 61 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 114
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 115 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 173
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 229 WPG-----VTSM----PDYKPS 241
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 166
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 227 WPG-----VTSM----PDYKPS 239
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 20 VERGCYVCIIIGFCEGGDMAEAIKK-----ANSKLFSEEKLCKWLVQLLM----ALDYLH 70
V +G +I+ GD+ ++ AN+ + + L K ++Q+ + YL+
Sbjct: 87 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK-MIQMAGEIADGMAYLN 145
Query: 71 ANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCPELLADI 127
AN +HRD+ N + +D +++GDFG+ + + D + +M PE L D
Sbjct: 146 ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG 205
Query: 128 PYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKS 186
+ + SD+WS G ++E+ +L + ++ + ++ + + + P L++
Sbjct: 206 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM 265
Query: 187 MLRKNPELRPSAAELLRHV 205
+ NP++RPS E++ +
Sbjct: 266 CWQYNPKMRPSFLEIISSI 284
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 69 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 122
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 123 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 181
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 182 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 144 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 263
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 264 FELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 65 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 118
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 119 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 177
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 62 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 115
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 174
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 231 WPG-----VTSM----PDYKPS 243
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 228 WPG-----VTSM----PDYKPS 240
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 67 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 120
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 121 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 179
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 180 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 141 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 260
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 261 FELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 93 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 146
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 147 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 205
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 206 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 269
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 166
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 227 WPG-----VTSM----PDYKPS 239
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 66 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 119
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 120 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 178
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 179 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 229 WPG-----VTSM----PDYKPS 241
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 60 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 113
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 114 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 172
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 173 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 171
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 232 WPG-----VTSM----PDYKPS 244
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 62 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 115
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 174
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 68 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 121
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 122 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 180
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 181 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 80 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 133
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 134 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 192
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 143 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 262
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 263 FELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 172 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 291
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 292 FELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 231 WPG-----VTSM----PDYKPS 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 80 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 133
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 134 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 192
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL-TSDDLASSVVGTP 116
+L QLL L + H++ +LHRD+K N+ + + I+L DFGLA+ V T
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 117 SYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
Y PE+L Y S + DIWSLGC EM + + F + +I +++ P
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 176 YSGAFRGLVKSMLRKNPELRPS 197
+ G V SM P+ +PS
Sbjct: 230 WPG-----VTSM----PDYKPS 242
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 143 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 262
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 263 FELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 270
Query: 175 KYSGAFR 181
Y +R
Sbjct: 271 AYLNKYR 277
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---ASSVVGTPSYMCP 121
+ YL+AN +HRD+ N + +D +++GDFG+ + + D + +M P
Sbjct: 137 GMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E L D + + SD+WS G ++E+ +L + ++ + ++ + + + P
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 256
Query: 181 RGLVKSMLRKNPELRPSAAELLRHV 205
L++ + NP++RPS E++ +
Sbjct: 257 LELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 56 CKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKI---LTSDDLASSV 112
CK +++LH NH +HRD+K +NI L + ++ DFGLA+ + S +
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 113 VGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA 151
VGT +YM PE L KSDI+S G + E+ + PA
Sbjct: 196 VGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPA 233
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QLL +L Y+H+ I HRD+K N+ L + +L DFG AKIL + + S + +
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y + DIWS GC + E+ +P F
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 251
Query: 175 KYSGAFR 181
Y +R
Sbjct: 252 VYLNKYR 258
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 175 KYSGAFR 181
Y +R
Sbjct: 250 VYLNKYR 256
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++ A+++ K
Sbjct: 65 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQ-AHAERIDHIK 118
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 119 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVK 177
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 250
Query: 175 KYSGAFR 181
Y +R
Sbjct: 251 VYLNKYR 257
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 175 KYSGAFR 181
Y +R
Sbjct: 250 VYLNKYR 256
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 175 KYSGAFR 181
Y +R
Sbjct: 250 VYLNKYR 256
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 250
Query: 175 KYSGAFR 181
Y +R
Sbjct: 251 VYLNKYR 257
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 175 KYSGAFR 181
Y +R
Sbjct: 250 VYLNKYR 256
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 175 KYSGAFR 181
Y +R
Sbjct: 250 VYLNKYR 256
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 52 EEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFL-TKDQDIRLGDFGLAKILT-----S 105
EE ++ QLL L Y+H+ ++LHRD+K +N+F+ T+D +++GDFGLA+I+
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK 178
Query: 106 DDLASSVVGTPSYMCPELLADIP--YGSKSDIWSLGCCIYEMTSLKPAFKA 154
L+ +V T Y P LL P Y D+W+ GC EM + K F
Sbjct: 179 GHLSEGLV-TKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAG 227
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 117 SYMCPELLADI-PYGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSIVAPLPT 174
+ PELL D+ Y D+WSLGC M K P F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 175 KYSGAFR 181
Y +R
Sbjct: 250 VYLNKYR 256
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 62 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 115
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HRD+ NI + + +++GDFGL K+L D V
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EFFKVK 174
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFL-TKDQDIRLGDFGLAKILTSDDLASSVVGTP 116
++ QL A+ ++H+ I HRD+K N+ + +KD ++L DFG AK L + + + + +
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSR 205
Query: 117 SYMCPEL-LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSI-VAPLPT 174
Y PEL L Y D+WS+GC E+ KP F + I+++ + I + PT
Sbjct: 206 FYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG---ETSIDQLVRIIQIMGTPT 262
Query: 175 KYSGAFRGLVKSMLRKNP 192
K + M+R NP
Sbjct: 263 K---------EQMIRMNP 271
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 10/191 (5%)
Query: 20 VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDV 79
V + V II F E G + ++ + N F+ +L L + + YL + +HRD+
Sbjct: 103 VTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDL 161
Query: 80 KCSNIFLTKDQDIRLGDFGLAKIL---TSDDLASSVVGTP---SYMCPELLADIPYGSKS 133
NI + + ++ DFGL++ L TSD +S +G + PE + + S S
Sbjct: 162 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSAS 221
Query: 134 DIWSLGCCIYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKN 191
D+WS G ++E+ S +P + + Q +IN I + P P A L+ +K+
Sbjct: 222 DVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKD 280
Query: 192 PELRPSAAELL 202
RP +++
Sbjct: 281 RNHRPKFGQIV 291
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 17/142 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKK-------------ANSKLFSEEKLCKWLVQLLMALDYL 69
G V +I +C GD+ +++ ANS L S L + Q+ + +L
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL-STRDLLHFSSQVAQGMAFL 180
Query: 70 HANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLAD 126
+ + +HRDV N+ LT ++GDFGLA+ + +D + P +M PE + D
Sbjct: 181 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 240
Query: 127 IPYGSKSDIWSLGCCIYEMTSL 148
Y +SD+WS G ++E+ SL
Sbjct: 241 CVYTVQSDVWSYGILLWEIFSL 262
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
N F+ W ++CI G + E +K+ N + + + QL AL +
Sbjct: 80 NKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 138
Query: 69 LHANHILHRDVKCSNIFLT-------------------KDQDIRLGDFGLAKILTSDDLA 109
LH N + H D+K NI K+ IR+ DFG A +
Sbjct: 139 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHH 196
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+++V T Y PE++ ++ + D+WS+GC ++E F+ + + + + K I+
Sbjct: 197 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK-IL 255
Query: 170 APLPT 174
P+P+
Sbjct: 256 GPIPS 260
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 56 CKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSV--- 112
CK +++LH NH +HRD+K +NI L + ++ DFGLA+ S+ A +V
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQTVMXX 193
Query: 113 --VGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA 151
VGT +YM PE L KSDI+S G + E+ + PA
Sbjct: 194 RIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPA 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
I+ + G++ + +++ N + + L Q+ A++YL + +HRD+ N +
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 164
Query: 88 KDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEM 145
++ +++ DFGL++++T D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 165 ENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
Query: 146 TSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAE 200
+ + + D+ + + + K P L+++ + +P RPS AE
Sbjct: 225 ATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 314 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 371
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 372 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 431
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 491
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK PE RP+
Sbjct: 492 SLHDLMCQCWRKEPEERPT 510
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 65 ALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCP 121
+ +L ++ +HRD+ N + +D +++ DFG+ + + D SS VGT + P
Sbjct: 116 GMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVKWSAP 174
Query: 122 ELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAF 180
E+ Y SKSD+W+ G ++E+ SL K + + ++ K+++ P S
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTI 234
Query: 181 RGLVKSMLRKNPELRPSAAELL 202
++ S + PE RP+ +LL
Sbjct: 235 YQIMYSCWHELPEKRPTFQQLL 256
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
N F+ W ++CI G + E +K+ N + + + QL AL +
Sbjct: 112 NKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 170
Query: 69 LHANHILHRDVKCSNIFLT-------------------KDQDIRLGDFGLAKILTSDDLA 109
LH N + H D+K NI K+ IR+ DFG A +
Sbjct: 171 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHH 228
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+++V T Y PE++ ++ + D+WS+GC ++E F+ + + + + K I+
Sbjct: 229 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK-IL 287
Query: 170 APLPT 174
P+P+
Sbjct: 288 GPIPS 292
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 9 NPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDY 68
N F+ W ++CI G + E +K+ N + + + QL AL +
Sbjct: 89 NKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 147
Query: 69 LHANHILHRDVKCSNIFLT-------------------KDQDIRLGDFGLAKILTSDDLA 109
LH N + H D+K NI K+ IR+ DFG A +
Sbjct: 148 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHH 205
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIV 169
+++V T Y PE++ ++ + D+WS+GC ++E F+ + + + + K I+
Sbjct: 206 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK-IL 264
Query: 170 APLPT 174
P+P+
Sbjct: 265 GPIPS 269
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 1 MELISKIRNPFIVEYKD-SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
++++ + + FIV+Y+ S+ + +++ + G + + +++ ++L +L +
Sbjct: 62 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYS 120
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPS-- 117
Q+ ++YL + +HRD+ NI + + +++ DFGLAK+L D VV P
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQS 179
Query: 118 ---YMCPELLADIPYGSKSDIWSLGCCIYEM 145
+ PE L+D + +SD+WS G +YE+
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 27 CIIIGFCEGGDMAEAIKK-ANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+I+ FC G + +++ +N+ E + L ++ +++L N I+HR++K NI
Sbjct: 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 86 LTKDQD----IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADI--------PYGSKS 133
+D +L DFG A+ L D+ S+ GT Y+ P++ YG+
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 134 DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT-KYSGAFRGLVKS 186
D+WS+G Y + F+ F+ + NK ++ + T K SGA G+ K+
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMYKIITGKPSGAISGVQKA 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 220
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 222
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 220
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 23 GCYVCIIIGFCEGGDMAEAIK-KANSKLFSEE-------KLCKWLVQLLMALDYLHANHI 74
G V +I +C GD+ ++ KA + L E+ L + Q+ + +L + +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC 181
Query: 75 LHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLADIPYGS 131
+HRDV N+ LT ++GDFGLA+ + +D + P +M PE + D Y
Sbjct: 182 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 241
Query: 132 KSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ SL
Sbjct: 242 QSDVWSYGILLWEIFSL 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 224
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + Q +RL D+GLA+ + V +
Sbjct: 137 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 196
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M + P F D + +I K +
Sbjct: 197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVL 250
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 1 MELISKIRNPFIVEYKD-SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
++++ + + FIV+Y+ S+ + +++ + G + + +++ ++L +L +
Sbjct: 59 IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYS 117
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPS-- 117
Q+ ++YL + +HRD+ NI + + +++ DFGLAK+L D VV P
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQS 176
Query: 118 ---YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
+ PE L+D + +SD+WS G +YE+ +
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 214
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 23 GCYVCIIIGFCEGGDMAEAIK-KANSKLFSEE-------KLCKWLVQLLMALDYLHANHI 74
G V +I +C GD+ ++ KA + L E+ L + Q+ + +L + +
Sbjct: 114 GGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC 173
Query: 75 LHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLADIPYGS 131
+HRDV N+ LT ++GDFGLA+ + +D + P +M PE + D Y
Sbjct: 174 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 233
Query: 132 KSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ SL
Sbjct: 234 QSDVWSYGILLWEIFSL 250
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDLASSVVGTP 116
++ +LL ALDY H+ I+HRDVK N+ + Q +RL D+GLA+ + V +
Sbjct: 142 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 201
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M + P F D + +I K +
Sbjct: 202 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVL 255
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY------VCIIIGFCEGGDMAEAIKKANSKLFSEEK 54
+E++ +++ IV+YK CY + +I+ + G + + ++K ++ K
Sbjct: 63 IEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIK 116
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L ++ Q+ ++YL +HR++ NI + + +++GDFGL K+L D V
Sbjct: 117 LLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDK-EYYKVK 175
Query: 115 TPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE L + + SD+WS G +YE+ +
Sbjct: 176 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 65 ALDYLHAN---HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTPSYM 119
L YLH + I+HRDVK +NI L ++ + +GDFGLAK++ D + +V GT ++
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHI 210
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALIN 162
PE L+ K+D++ G + E+ + + +AFD+ L N
Sbjct: 211 APEYLSTGKSSEKTDVFGYGVMLLELITGQ---RAFDLARLAN 250
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 56 CKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKI---LTSDDLASSV 112
CK +++LH NH +HRD+K +NI L + ++ DFGLA+ + +
Sbjct: 130 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 113 VGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA 151
VGT +YM PE L KSDI+S G + E+ + PA
Sbjct: 190 VGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPA 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCY-VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
++++ + + I++YK + G + +++ + G + + + + + L +L +
Sbjct: 84 IDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL---AQLLLFA 140
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL--------TSDDLASS 111
Q+ + YLHA H +HRD+ N+ L D+ +++GDFGLAK + +D S
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 112 VVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
V + PE L + + SD+WS G +YE+ +
Sbjct: 201 VF----WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +I F G D+ E I + +L +E ++ ++ Q+ AL +LH+++I H D++ NI
Sbjct: 76 LVMIFEFISGLDIFERINTSAFEL-NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENII 134
Query: 86 LT--KDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIY 143
+ I++ +FG A+ L D + P Y PE+ + +D+WSLG +Y
Sbjct: 135 YQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY 194
Query: 144 EMTS-LKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGL-------VKSMLRKNPELR 195
+ S + P + Q + N +N T AF+ + V +L K + R
Sbjct: 195 VLLSGINPFLAETNQQIIENIMNAE-----YTFDEEAFKEISIEAMDFVDRLLVKERKSR 249
Query: 196 PSAAELLRHVHLQPYVLKVHLKL 218
+A+E L+H L+ + +V K+
Sbjct: 250 MTASEALQHPWLKQKIERVSTKV 272
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+I + G + + +K K +L Q
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 1 MELISKIRNPFIVEYKD-SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
++++ + + FIV+Y+ S+ + +++ + G + + +++ ++L +L +
Sbjct: 63 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYS 121
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPS-- 117
Q+ ++YL + +HRD+ NI + + +++ DFGLAK+L D VV P
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQS 180
Query: 118 ---YMCPELLADIPYGSKSDIWSLGCCIYEM 145
+ PE L+D + +SD+WS G +YE+
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+I + G + + +K K +L Q
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 1 MELISKIRNPFIVEYKD-SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
++++ + + FIV+Y+ S+ + +++ + G + + +++ ++L +L +
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYS 133
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPS-- 117
Q+ ++YL + +HRD+ NI + + +++ DFGLAK+L D VV P
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQS 192
Query: 118 ---YMCPELLADIPYGSKSDIWSLGCCIYEM 145
+ PE L+D + +SD+WS G +YE+
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 191
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 193
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 247
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 141 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 200
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 201 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 254
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKD-QDIRLGDFGLAKILTSDDLASSVVGTP 116
++ ++L ALDY H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 117 SYMCPELLADIP-YGSKSDIWSLGCCIYEMTSLK-PAFKAFDMQALINKINKSI 168
+ PELL D Y D+WSLGC + M K P F D + +I K +
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD-LASSVVGTP-S 117
+Q+ A+ YL + + +HRD+ NI + + ++LGDFGL++ + +D +SV P
Sbjct: 116 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKY 176
+M PE + + + SD+W C++E+ S K F + + +I + K P P
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 235
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELL 202
L+ +P RP EL+
Sbjct: 236 PPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDI-RLGDFGLAKILTSDDLASSVVGTP 116
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 117 SYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
Y PEL+ Y S D+WS GC + E+ +P F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 80 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 137
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 138 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 197
Query: 144 EMTS 147
M +
Sbjct: 198 AMLA 201
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS--------------- 105
QL+ + YLH+ +LHRD+K SNI L + +++ DFGL++ +
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 106 ----DD---LASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
DD + + V T Y PE LL Y D+WSLGC + E+ KP F
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 127 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 186
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 187 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 246
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP++RP+ E++
Sbjct: 247 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 59 LVQLLMALDYLHANHILHRDVKCSNIFLTKDQD----IRLGDFGLAKILTSD-----DLA 109
L Q+L + YLHAN +LHRD+K +NI + + +++ D G A++ S DL
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL- 192
Query: 110 SSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIYEMTSLKPAF 152
VV T Y PELL + +K+ DIW++GC E+ + +P F
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD-LASSVVGTP-S 117
+Q+ A+ YL + + +HRD+ NI + + ++LGDFGL++ + +D +SV P
Sbjct: 120 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKY 176
+M PE + + + SD+W C++E+ S K F + + +I + K P P
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 239
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELL 202
L+ +P RP EL+
Sbjct: 240 PPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP++RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD-LASSVVGTP-S 117
+Q+ A+ YL + + +HRD+ NI + + ++LGDFGL++ + +D +SV P
Sbjct: 132 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKY 176
+M PE + + + SD+W C++E+ S K F + + +I + K P P
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 251
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELL 202
L+ +P RP EL+
Sbjct: 252 PPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 231 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 408
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK PE RP+
Sbjct: 409 SLHDLMCQCWRKEPEERPT 427
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 231 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 408
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK PE RP+
Sbjct: 409 SLHDLMCQCWRKEPEERPT 427
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ KIR+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 65 QVMKKIRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP +RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL----------FSEEKLCKWLVQLLMALDYLHAN 72
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++L +
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR 163
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLADIPY 129
+HRD+ NI L++ +++ DFGLA+ + D + P +M PE + D Y
Sbjct: 164 KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ SL
Sbjct: 224 TIQSDVWSFGVLLWEIFSL 242
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP++RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 129 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 189 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 248
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP++RP+ E++
Sbjct: 249 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKK-------------ANSKLFSEEKLCKWLVQLLMALDYL 69
G V +I +C GD+ +++ ANS S L + Q+ + +L
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA-STRDLLHFSSQVAQGMAFL 180
Query: 70 HANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLAD 126
+ + +HRDV N+ LT ++GDFGLA+ + +D + P +M PE + D
Sbjct: 181 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 240
Query: 127 IPYGSKSDIWSLGCCIYEMTSL 148
Y +SD+WS G ++E+ SL
Sbjct: 241 CVYTVQSDVWSYGILLWEIFSL 262
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 144 EMTS 147
M +
Sbjct: 199 AMLA 202
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 56 CKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA-----S 110
CK +++LH NH +HRD+K +NI L + ++ DFGLA+ S+ A S
Sbjct: 127 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQXVXXS 184
Query: 111 SVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA 151
+VGT +Y PE L KSDI+S G + E+ + PA
Sbjct: 185 RIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPA 224
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
+ + +C GG++ + I+ E ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 88 KDQDIRLGDFGLAKILTSDD---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCIY 143
+ ++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 144 EMTS 147
M +
Sbjct: 200 AMLA 203
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 31 GFCEGGDMAEAIKKANSKLF-----SEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
GF E +++ ++ +S F + E L + Q+ +++L + +HRD+ NI
Sbjct: 172 GFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNIL 231
Query: 86 LTKDQDIRLGDFGLAKIL--TSDDLASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCI 142
L+++ +++ DFGLA+ + D + P +M PE + D Y +KSD+WS G +
Sbjct: 232 LSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLL 291
Query: 143 YEMTSLKPA-FKAFDM-QALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAE 200
+E+ SL + + M + +++ + + P + ++ ++P+ RP AE
Sbjct: 292 WEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAE 351
Query: 201 LLRHV 205
L+ +
Sbjct: 352 LVEKL 356
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 136
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 197 THQSDVWSYGVTVWELMTF 215
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 19 WVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRD 78
W E ++CI+ G + IK+ F + + K Q+ ++++LH+N + H D
Sbjct: 85 WFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTD 143
Query: 79 VKCSNIFLTKDQ-------------------DIRLGDFGLAKILTSDDLASSVVGTPSYM 119
+K NI + DI++ DFG A D+ S++V T Y
Sbjct: 144 LKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTLVSTRHYR 201
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLP 173
PE++ + + D+WS+GC + E F D + + + + I+ PLP
Sbjct: 202 APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER-ILGPLP 254
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 79 HVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 137
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 198 THQSDVWSYGVTVWELMTF 216
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 76 HRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA--SSVVGTPSYMCPELLADIPYGSKS 133
HRDVK NI ++ D L DFG+A T + L + VGT Y PE ++ ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 134 DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK--YSGAFRGLVKSMLRKN 191
DI++L C +YE + P ++ + IN++I P + AF ++ KN
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIARGXAKN 276
Query: 192 PELR 195
PE R
Sbjct: 277 PEDR 280
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 36/209 (17%)
Query: 15 YKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHI 74
Y++ + R C + I++ +GG++ I+ + F+E + + + + A+ YLH+ +I
Sbjct: 80 YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 75 LHRDVKCSNIFLTKDQD---IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGS 131
HRDVK N+ T + ++L DFG AK T + Y
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK---------------------YDK 177
Query: 132 KSDIWSLGCCIYEMTSLKPAFKAF-------DMQALINKINKSIVAPLPTKYSGAFRGLV 184
D+WSLG +Y + P F + M+ I P ++ S + L+
Sbjct: 178 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 237
Query: 185 KSMLRKNPELRPSAAELLRHVHLQPYVLK 213
+++L+ P R + E + H P++++
Sbjct: 238 RNLLKTEPTQRMTITEFMNH----PWIMQ 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 58 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 116 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 175
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 235
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK PE RP+
Sbjct: 236 SLHDLMCQCWRKEPEERPT 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 231 QVMKKLRHEKLVQLYAVVSEEPIY--IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 408
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK PE RP+
Sbjct: 409 SLHDLMCQCWRKEPEERPT 427
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +R+ DFGLA+ + + D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 102/223 (45%), Gaps = 21/223 (9%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKAN----------SKLF 50
M++I K +N I+ + + G + +I+G+ G++ E ++ +++
Sbjct: 94 MKMIGKHKN--IINLLGACTQDGP-LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 51 SEEKLCKWLV----QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD 106
E+ K LV QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 107 DLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALIN 162
D +M PE L D Y +SD+WS G ++E+ +L + + ++ L
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 163 KINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ + P + +++ P RP+ +L+ +
Sbjct: 271 LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ + G + + +K K +L Q+ + Y+ + +HRD++ +NI
Sbjct: 77 IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 136
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
+ ++ ++ DFGLA+++ ++ A P + PE + KSD+WS G +
Sbjct: 137 VGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 196
Query: 144 EMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+T+ + + + +++++ + P P + + L+ RK PE RP+
Sbjct: 197 ELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 251
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 56 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 114 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 173
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 233
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 234 SLHDLMCQCWRKDPEERPT 252
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 62 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 179
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 239
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK PE RP+
Sbjct: 240 SLHDLMCQCWRKEPEERPT 258
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G E + K + + L + Q+ + +L + + +HRDV N+ LT ++G
Sbjct: 141 GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 200
Query: 96 DFGLAKILTSDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL 148
DFGLA+ + +D + P +M PE + D Y +SD+WS G ++E+ SL
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 256
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 65/272 (23%)
Query: 1 MELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDM---------------------- 38
+ L+ K+ +P I + + E Y+C+++ C GG +
Sbjct: 79 VRLMKKLHHPNIARLYEVY-EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 39 ---------AEAIK------KANSKLFSEEKLCKWLV-QLLMALDYLHANHILHRDVKCS 82
EAI + + EKL ++ Q+ AL YLH I HRD+K
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 83 NIFLTKDQ--DIRLGDFGLAKILTSDDLA-----SSVVGTPSYMCPELL--ADIPYGSKS 133
N + ++ +I+L DFGL+K + ++ GTP ++ PE+L + YG K
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 134 DIWSLGCCIYEMTSLKPAFKAFDMQALINKI----------NKSIVAPLPTKYSGAFRGL 183
D WS G ++ + F + I+++ N ++++PL R L
Sbjct: 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLA-------RDL 310
Query: 184 VKSMLRKNPELRPSAAELLRHVHLQPYVLKVH 215
+ ++L +N + R A L+H + + K++
Sbjct: 311 LSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 18/174 (10%)
Query: 27 CIIIGFCEGGDMAEAIKK-ANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+I+ FC G + +++ +N+ E + L ++ +++L N I+HR++K NI
Sbjct: 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 86 LTKDQD----IRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADI--------PYGSKS 133
+D +L DFG A+ L D+ + GT Y+ P++ YG+
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 134 DIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPT-KYSGAFRGLVKS 186
D+WS+G Y + F+ F+ + NK ++ + T K SGA G+ K+
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMYKIITGKPSGAISGVQKA 254
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 54 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 111
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 112 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 171
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 231
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 232 SLHDLMCQCWRKDPEERPT 250
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 28 IIIGFCEGGDMAEAIK----KANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSN 83
+I+ F + GD+ + + K + L K++V + + ++YL + LHRD+ N
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 84 IFLTKDQDIRLGDFGLAKILTSDDL--ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGC 140
L D + + DFGL+K + S D + P ++ E LAD Y SKSD+W+ G
Sbjct: 178 CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGV 237
Query: 141 CIYEMTS 147
++E+ +
Sbjct: 238 TMWEIAT 244
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ +++ + +GG++ + I + L +E ++ Q+ + ++H +ILH D+K NI
Sbjct: 161 IVLVMEYVDGGELFDRIIDESYNL-TELDTILFMKQICEGIRHMHQMYILHLDLKPENIL 219
Query: 86 -LTKD-QDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIY 143
+ +D + I++ DFGLA+ + GTP ++ PE++ +D+WS+G Y
Sbjct: 220 CVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279
Query: 144 EMTS-LKPAFKAFDMQALINKI--NKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAE 200
+ S L P D + L N + + S + + +L K R SA+E
Sbjct: 280 MLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASE 339
Query: 201 LLRHVHLQPYVLKVHLKLNSPRR 223
L+H L + K+H +L++ ++
Sbjct: 340 ALKHPWLSDH--KLHSRLSAQKK 360
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 62 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT 179
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 239
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK PE RP+
Sbjct: 240 SLHDLMCQCWRKEPEERPT 258
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 232 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 289
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGL +++ ++ A P +
Sbjct: 290 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWT 349
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 350 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 409
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 410 SLHDLMCQCWRKDPEERPT 428
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKAN--------------SKLFSEEKLCKWLVQLLMALDY 68
G V +I +C GD+ +++ + S L + Q+ + +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAF 181
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLA 125
L + + +HRDV N+ LT ++GDFGLA+ + +D + P +M PE +
Sbjct: 182 LASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 241
Query: 126 DIPYGSKSDIWSLGCCIYEMTSL 148
D Y +SD+WS G ++E+ SL
Sbjct: 242 DCVYTVQSDVWSYGILLWEIFSL 264
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 20 VERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDV 79
V + V II F E G + ++ + N F+ +L L + + YL + +HR +
Sbjct: 77 VTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRAL 135
Query: 80 KCSNIFLTKDQDIRLGDFGLAKIL---TSDDLASSVVGTP---SYMCPELLADIPYGSKS 133
NI + + ++ DFGL++ L TSD +S +G + PE + + S S
Sbjct: 136 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSAS 195
Query: 134 DIWSLGCCIYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKN 191
D+WS G ++E+ S +P + + Q +IN I + P P A L+ +K+
Sbjct: 196 DVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKD 254
Query: 192 PELRPSAAELL 202
RP +++
Sbjct: 255 RNHRPKFGQIV 265
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL------------FSEEKLCKWLVQLLMALDYLH 70
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++L
Sbjct: 106 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLA 165
Query: 71 ANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS--DDLASSVVGTP-SYMCPELLADI 127
+ +HRD+ NI L++ +++ DFGLA+ + D + P +M PE + D
Sbjct: 166 SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 128 PYGSKSDIWSLGCCIYEMTSL 148
Y +SD+WS G ++E+ SL
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSL 246
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEEPIY--IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 65 ALDYLHAN---HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTPSYM 119
L YLH + I+HRDVK +NI L ++ + +GDFGLAK++ D + +V G ++
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHI 202
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALIN 162
PE L+ K+D++ G + E+ + + +AFD+ L N
Sbjct: 203 APEYLSTGKSSEKTDVFGYGVMLLELITGQ---RAFDLARLAN 242
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 1 MELISKIRNPFIVEYKDSWVERG-CYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
+E++ + + IV+YK ++G V +++ + G + + + + L +L +
Sbjct: 61 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL---AQLLLFA 117
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL--------TSDDLASS 111
Q+ + YLHA H +HR + N+ L D+ +++GDFGLAK + +D S
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 112 VVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
V + PE L + + SD+WS G +YE+ +
Sbjct: 178 VF----WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 1 MELISKIRNPFIVEYKDSWVERG-CYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
+E++ + + IV+YK ++G V +++ + G + + + + L +L +
Sbjct: 62 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL---AQLLLFA 118
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL--------TSDDLASS 111
Q+ + YLHA H +HR + N+ L D+ +++GDFGLAK + +D S
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 112 VVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
V + PE L + + SD+WS G +YE+ +
Sbjct: 179 VF----WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 112 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 170
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 231 THQSDVWSYGVTVWELMTF 249
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 88 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 146
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 207 THQSDVWSYGVTVWELMTF 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I++ + G + + +K K +L Q
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEEPIY--IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 139
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 200 THQSDVWSYGVTVWELMTF 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 84 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 142
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 203 THQSDVWSYGVTVWELMTF 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + +KK N F+ +L L + + YL +HRD+ NI
Sbjct: 98 VMIVTEYMENGSLDTFLKK-NDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNIL 156
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 157 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIV 216
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I + + P P A L+ +K RP
Sbjct: 217 MWEVVSYGERPYWEMTN-QDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFD 275
Query: 200 ELL 202
E++
Sbjct: 276 EIV 278
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 28 IIIGFCEGGDMAEAIKKANSK--LFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+++ F + G + I++ K +E+++ L+ + L+ +HA HRD+K +NI
Sbjct: 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNIL 166
Query: 86 LTKDQDIRLGDFGLA-----------KILTSDDLASSVVGTPSYMCPELLADIPY---GS 131
L + L D G + LT D A+ T SY PEL + +
Sbjct: 167 LGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC-TISYRAPELFSVQSHCVIDE 225
Query: 132 KSDIWSLGCCIYEMT----SLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSM 187
++D+WSLGC +Y M F+ D AL + + P ++S A L+ SM
Sbjct: 226 RTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL--AVQNQLSIPQSPRHSSALWQLLNSM 283
Query: 188 LRKNPELRPSAAELLRHVH-LQP 209
+ +P RP LL + LQP
Sbjct: 284 MTVDPHQRPHIPLLLSQLEALQP 306
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 136
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 197 THQSDVWSYGVTVWELMTF 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 258
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ P+ + +++ P RP+ +L+
Sbjct: 259 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 295
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + +P I+ + V RG I+ + E G + ++ + + F+ +L L +
Sbjct: 103 IMGQFDHPNIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGV 160
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SY 118
+ YL +HRD+ N+ + + ++ DFGL+++L D D A + G +
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKY 176
PE +A + S SD+WS G ++E+ + +P + + + +I+ + + P P
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-RDVISSVEEGYRLPAPMGC 279
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELL 202
A L+ K+ RP ++++
Sbjct: 280 PHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 103 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 161
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 222 THQSDVWSYGVTVWELMTF 240
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL--------TSDDLASSV 112
Q+ + YLHA H +HR++ N+ L D+ +++GDFGLAK + +D S V
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 113 VGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
+ PE L + + SD+WS G +YE+ +
Sbjct: 185 F----WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 143
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 204 THQSDVWSYGVTVWELMTF 222
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGLA++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 139
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 200 THQSDVWSYGVTVWELMTF 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 424 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 474
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 475 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 535 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 588
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 138
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 199 THQSDVWSYGVTVWELMTF 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 79 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 137
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 198 THQSDVWSYGVTVWELMTF 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 80 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 138
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 199 THQSDVWSYGVTVWELMTF 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 139
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 200 THQSDVWSYGVTVWELMTF 218
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 136
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 197 THQSDVWSYGVTVWELMTF 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 143
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 204 THQSDVWSYGVTVWELMTF 222
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 423 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 473
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 474 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 587
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 81 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 139
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 200 THQSDVWSYGVTVWELMTF 218
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 82 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 140
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 201 THQSDVWSYGVTVWELMTF 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 85 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 143
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 204 THQSDVWSYGVTVWELMTF 222
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 255
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ P+ + +++ P RP+ +L+
Sbjct: 256 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 78 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 136
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 197 THQSDVWSYGVTVWELMTF 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 213
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 273
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 274 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + +++ + F ++L + + A++YL + LHRD+ N
Sbjct: 94 IFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 152
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIY 143
+ +++ DFGL++ + D+ SSV + PE+L + SKSDIW+ G ++
Sbjct: 153 VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW 212
Query: 144 EMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
E+ SL K ++ F I + + P S ++ S + + RP+ LL
Sbjct: 213 EIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272
Query: 203 RHV 205
++
Sbjct: 273 SNI 275
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + +++ + F ++L + + A++YL + LHRD+ N
Sbjct: 78 IFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 136
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCI 142
+ +++ DFGL++ + D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 137 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 195
Query: 143 YEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+E+ SL K ++ F I + + P S ++ S + + RP+ L
Sbjct: 196 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 255
Query: 202 LRHV 205
L ++
Sbjct: 256 LSNI 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD+ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HR++ N + D +++GDFG+ + + D
Sbjct: 131 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 191 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 250
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP +RP+ E++
Sbjct: 251 YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 251
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ P+ + +++ P RP+ +L+
Sbjct: 252 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 211
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 271
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 272 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 270
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 330
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 331 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 259
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ P+ + +++ P RP+ +L+
Sbjct: 260 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 72 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 130
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 191 THQSDVWSYGVTVWELMTF 209
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 136
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 197 THQSDVWSYGVTVWELMTF 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + +++ + F ++L + + A++YL + LHRD+ N
Sbjct: 74 IFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 132
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCI 142
+ +++ DFGL++ + D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 133 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 191
Query: 143 YEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+E+ SL K ++ F I + + P S ++ S + + RP+ L
Sbjct: 192 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 202 LRHV 205
L ++
Sbjct: 252 LSNI 255
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + +P +V + + V RG V I+I F E G + ++K + + F+ +L L +
Sbjct: 97 IMGQFDHPNVV-HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGI 154
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SY 118
+ YL +HRD+ NI + + ++ DFGL++++ D + + G +
Sbjct: 155 AAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL--KPAFKAFDM--QALINKINKSIVAPLPT 174
PE + + S SD+WS G ++E+ S +P +DM Q +I I + P P
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAIEEGYRLPAPM 271
Query: 175 KYSGAFRGLVKSMLRKNPELRPSAAELL 202
L+ +K RP +++
Sbjct: 272 DCPAGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HR++ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP +RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ P+ + +++ P RP+ +L+
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ K+R+ +V+ E Y I+ + G + + +K K +L Q
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYM 119
+ + Y+ + +HRD++ +NI + ++ ++ DFGLA+++ ++ A P +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSG 178
PE + KSD+WS G + E+T+ + + + +++++ + P P +
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE 242
Query: 179 AFRGLVKSMLRKNPELRPS 197
+ L+ RK+PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 3 LISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
++ + +P I+ + V RG I+ + E G + ++ + + F+ +L L +
Sbjct: 103 IMGQFDHPNIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGV 160
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SY 118
+ YL +HRD+ N+ + + ++ DFGL+++L D D A + G +
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKY 176
PE +A + S SD+WS G ++E+ + +P + + + +I+ + + P P
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-RDVISSVEEGYRLPAPMGC 279
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELL 202
A L+ K+ RP ++++
Sbjct: 280 PHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 216
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 276
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 277 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT---PS 117
QL ++YL + +HRD+ N+ +T++ +++ DFGLA+ + + D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKY 176
+M PE L D Y +SD+WS G ++E+ +L + + ++ L + + P
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 284
Query: 177 SGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ +++ P RP+ +L+ +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ P+ + +++ P RP+ +L+
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ P+ + +++ P RP+ +L+ +
Sbjct: 308 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 75 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAEGMNYLEDR 133
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFGLAK+L +++ G +M E + Y
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 194 THQSDVWSYGVTVWELMTF 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + +++ + F ++L + + A++YL + LHRD+ N
Sbjct: 79 IFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 137
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCI 142
+ +++ DFGL++ + D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
Query: 143 YEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+E+ SL K ++ F I + + P S ++ S + + RP+ L
Sbjct: 197 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 256
Query: 202 LRHV 205
L ++
Sbjct: 257 LSNI 260
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + +++ + F ++L + + A++YL + LHRD+ N
Sbjct: 85 IFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 143
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCI 142
+ +++ DFGL++ + D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 144 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 202
Query: 143 YEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAEL 201
+E+ SL K ++ F I + + P S ++ S + + RP+ L
Sbjct: 203 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 262
Query: 202 LRHV 205
L ++
Sbjct: 263 LSNI 266
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
+ P+ + +++ P RP+ +L+ +
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLA 109
S + L Q+ ++YL + +HRD+ N+ +T+D +++ DFGLA+ + D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 110 SSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FKAFDMQALINKIN 165
+M PE L D Y +SD+WS G ++E+ +L + + ++ L +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 166 KSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
+ P+ + +++ P RP+ +L+
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 18 SWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHR 77
W + ++CI G + +K N + ++ QL A+ +LH N + H
Sbjct: 103 DWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHT 161
Query: 78 DVKCSNIF-----------LTKDQD--------IRLGDFGLAKILTSDDLASSVVGTPSY 118
D+K NI L K +D +R+ DFG A + S++V T Y
Sbjct: 162 DLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF--DHEHHSTIVSTRHY 219
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTK 175
PE++ ++ + D+WS+GC I+E F+ D + + + + I+ P+P++
Sbjct: 220 RAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER-ILGPIPSR 275
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL----------FSEEKLCKWLVQLLMALDYLHAN 72
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++L +
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR 163
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLADIPY 129
+HRD+ NI L++ +++ DFGLA+ + D + P +M PE + D Y
Sbjct: 164 KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ SL
Sbjct: 224 TIQSDVWSFGVLLWEIFSL 242
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 19 WVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRD 78
W E ++CI+ G + IK+ F + + K Q+ ++++LH+N + H D
Sbjct: 85 WFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTD 143
Query: 79 VKCSNIFLTKDQ-------------------DIRLGDFGLAKILTSDDLASSVVGTPSYM 119
+K NI + DI++ DFG A D+ S++V Y
Sbjct: 144 LKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT--YDDEHHSTLVXXRHYR 201
Query: 120 CPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLP 173
PE++ + + D+WS+GC + E F D + + + + I+ PLP
Sbjct: 202 APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER-ILGPLP 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 119 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 177
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 178 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 237
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 238 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 296
Query: 200 ELL 202
+++
Sbjct: 297 QIV 299
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + +++ + F ++L + + A++YL + LHRD+ N
Sbjct: 94 IFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 152
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIY 143
+ +++ DFGL++ + D+ SSV + PE+L + SKSDIW+ G ++
Sbjct: 153 VNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW 212
Query: 144 EMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
E+ SL K ++ F I + + P S ++ S + + RP+ LL
Sbjct: 213 EIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272
Query: 203 RHV 205
++
Sbjct: 273 SNI 275
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKIL--------TSDDLASSV 112
Q+ + YLH+ H +HR++ N+ L D+ +++GDFGLAK + +D S V
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 113 VGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
+ PE L + + SD+WS G +YE+ +
Sbjct: 185 F----WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +++ + + FS +L L + + YL + +HRD+ NI
Sbjct: 121 MMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASSVVGTPS----YMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D A+ + PE ++ + S SD+WS G
Sbjct: 180 VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV 239
Query: 142 IYE-MTSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAE 200
++E MT + + ++ IN P P A L+ ++ RP A+
Sbjct: 240 MWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD 299
Query: 201 LL 202
++
Sbjct: 300 IV 301
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL ++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDL---A 109
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG 189
Query: 110 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSL-KPAFKAFDMQALINKINKSI 168
+ +M PE L D + + SD+WS G ++E+TSL + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 169 VAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
P L++ + NP++RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 24 CYVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
++ ++G C G G + + +++ L + L W VQ+ + YL
Sbjct: 93 AHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGAL-GPQLLLNWGVQIAKGMYYLEE 151
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLADIP 128
+ ++HR++ N+ L +++ DFG+A +L DD L S TP +M E +
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 129 YGSKSDIWSLGCCIYEMTSL 148
Y +SD+WS G ++E+ +
Sbjct: 212 YTHQSDVWSYGVTVWELMTF 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 36/209 (17%)
Query: 34 EGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFL---TKDQ 90
+GG + I+K K F+E + + + + ALD+LH I HRD+K NI K
Sbjct: 94 QGGSILAHIQK--QKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVS 151
Query: 91 DIRLGDFGLAKILTSDDLASSVV--------GTPSYMCPELLADIP-----YGSKSDIWS 137
+++ DF L + ++ + + G+ YM PE++ Y + D+WS
Sbjct: 152 PVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWS 211
Query: 138 LGCCIYEMTSLKPAF-----------KAFDMQALINKINKSIVA---PLPTK----YSGA 179
LG +Y M S P F + + NK+ +SI P K S
Sbjct: 212 LGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSE 271
Query: 180 FRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
+ L+ +L ++ + R SAA++L+H +Q
Sbjct: 272 AKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 28 IIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLT 87
I + +GG + IK +S+ + + + + + YLH+ +I+HRD+ N +
Sbjct: 84 FITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR 142
Query: 88 KDQDIRLGDFGLAKILTSDDLAS---------------SVVGTPSYMCPELLADIPYGSK 132
+++++ + DFGLA+++ + +VVG P +M PE++ Y K
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 133 SDIWSLGCCIYEMTS 147
D++S G + E+
Sbjct: 203 VDVFSFGIVLCEIIG 217
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 58 WLVQLLMALDYLH--ANHILHRDVKCSNIFLTK-DQDIRLGDFGLAKILTSDDLASSVVG 114
+L QL+ ++ LH + ++ HRD+K N+ + + D ++L DFG AK L+ + + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 115 TPSYMCPELL-ADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAP 171
+ Y PEL+ + Y + DIWS+GC EM +P F+ + +++I + + P
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP 251
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL-------------FSEEKLCKWLVQLLMALDYL 69
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++L
Sbjct: 105 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 70 HANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS--DDLASSVVGTP-SYMCPELLAD 126
+ +HRD+ NI L++ +++ DFGLA+ + D + P +M PE + D
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD 224
Query: 127 IPYGSKSDIWSLGCCIYEMTSLK----PAFKAFDMQALINKINKSIVAPLPTKYSGAFRG 182
Y +SD+WS G ++E+ SL P K + ++ + P +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEEFCRRLKEGTRMRAPDYTTPEMYQ 282
Query: 183 LVKSMLRKNPELRPSAAELLRHV 205
+ P RP+ +EL+ H+
Sbjct: 283 TMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D A AI + + S ++L + + +DYL +HRD+ NI + ++ ++ D
Sbjct: 116 DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD 175
Query: 97 FGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FK 153
FGL++ + +G +M E L Y + SD+WS G ++E+ SL +
Sbjct: 176 FGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 233
Query: 154 AFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
L K+ + P L++ R+ P RPS A++L
Sbjct: 234 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 95 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 154
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS--DDLASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 155 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 214
Query: 126 DIPYGSKSDIWSLGCCIYEMTSL 148
D Y +SD+WS G ++E+ SL
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 24 CYVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHA 71
++ ++G C G G + + +++ L + L W VQ+ + YL
Sbjct: 75 AHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGAL-GPQLLLNWGVQIAKGMYYLEE 133
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLADIP 128
+ ++HR++ N+ L +++ DFG+A +L DD L S TP +M E +
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 129 YGSKSDIWSLGCCIYEMTSL 148
Y +SD+WS G ++E+ +
Sbjct: 194 YTHQSDVWSYGVTVWELMTF 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 92 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 150
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 151 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 211 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 269
Query: 200 ELL 202
+++
Sbjct: 270 QIV 272
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAI----------KKANSKLFSE----EKLCKWLVQLLMALDY 68
G + +I+ FC+ G+++ + K+A L+ + E L + Q+ +++
Sbjct: 106 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEF 165
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 166 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 225
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLK----PAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
D Y +SD+WS G ++E+ SL P K + ++ + P +
Sbjct: 226 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEEFCRRLKEGTRMRAPDYTTPEMY 283
Query: 182 GLVKSMLRKNPELRPSAAELLRHV 205
+ P RP+ +EL+ H+
Sbjct: 284 QTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + +++ + F ++L + + A++YL + LHRD+ N
Sbjct: 79 IFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 137
Query: 86 LTKDQDIRLGDFGLAKILTSDDLASS------VVGTPSYMCPELLADIPYGSKSDIWSLG 139
+ +++ DFGL++ + D+ SS V +P PE+L + SKSDIW+ G
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP----PEVLMYSKFSSKSDIWAFG 193
Query: 140 CCIYEMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSA 198
++E+ SL K ++ F I + + P S ++ S + + RP+
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
Query: 199 AELLRHV 205
LL ++
Sbjct: 254 KILLSNI 260
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D A AI + + S ++L + + +DYL +HRD+ NI + ++ ++ D
Sbjct: 126 DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD 185
Query: 97 FGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FK 153
FGL++ + +G +M E L Y + SD+WS G ++E+ SL +
Sbjct: 186 FGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243
Query: 154 AFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
L K+ + P L++ R+ P RPS A++L
Sbjct: 244 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ + E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 109 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 167
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 168 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 227
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 228 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 286
Query: 200 ELL 202
+++
Sbjct: 287 QIV 289
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 80 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 138
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFG AK+L +++ G +M E + Y
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 199 THQSDVWSYGVTVWELMTF 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 79 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 129
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 190 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 243
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 163
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS--DDLASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 164 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 223
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLK----PAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
D Y +SD+WS G ++E+ SL P K + ++ + P +
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEEFCRRLKEGTRMRAPDYTTPEMY 281
Query: 182 GLVKSMLRKNPELRPSAAELLRHV 205
+ P RP+ +EL+ H+
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 59 LVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-----DIRLGDFGLAKILT----SDDLA 109
L Q L +LH+ +I+HRD+K NI ++ + DFGL K L S
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 110 SSVVGTPSYMCPELLADIPYGSKS---DIWSLGCCIYEMTS--LKPAFKAFDMQALINKI 164
S V GT ++ PE+L++ + + DI+S GC Y + S P K+ QA I
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG 243
Query: 165 NKSIVAPLPTKYSGAF-RGLVKSMLRKNPELRPSAAELLRH 204
S+ P K+ R L++ M+ +P+ RPSA +L+H
Sbjct: 244 ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 138
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFG AK+L +++ G +M E + Y
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 199 THQSDVWSYGVTVWELMTF 217
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ F E G + ++ + N F+ +L L + + YL +HRD+ NI
Sbjct: 92 VMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNIL 150
Query: 86 LTKDQDIRLGDFGLAKIL---TSDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLG 139
+ + ++ DFGL++ L +SD +S +G + PE +A + S SD WS G
Sbjct: 151 VNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYG 210
Query: 140 CCIYEMTSLKPAFKAFDM--QALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
++E+ S +DM Q +IN I + P P + L+ +K+ RP
Sbjct: 211 IVMWEVMSFGER-PYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 268
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 81 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 131
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 81 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 131
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 143
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFG AK+L +++ G +M E + Y
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 204 THQSDVWSYGVTVWELMTF 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 136
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFG AK+L +++ G +M E + Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 197 THQSDVWSYGVTVWELMTF 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 163
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS--DDLASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 164 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIF 223
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLK----PAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
D Y +SD+WS G ++E+ SL P K + ++ + P +
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEEFCRRLKEGTRMRAPDYTTPEMY 281
Query: 182 GLVKSMLRKNPELRPSAAELLRHV 205
+ P RP+ +EL+ H+
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 138
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFG AK+L +++ G +M E + Y
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 199 THQSDVWSYGVTVWELMTF 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKD--QDIRL 94
++ E IKK + FS + K+ +L LD LH N I+H D+K NI L + I++
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 95 GDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKA 154
DFG + + + + Y PE++ YG D+WSLGC + E+ + P
Sbjct: 244 IDFGSS--CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301
Query: 155 FD 156
D
Sbjct: 302 ED 303
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 YVCIIIGFCEG------------GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHAN 72
+VC ++G C G + + +++ + S+ L W VQ+ ++YL
Sbjct: 82 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ-YLLNWCVQIAKGMNYLEDR 140
Query: 73 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTP---SYMCPELLADIPY 129
++HRD+ N+ + Q +++ DFG AK+L +++ G +M E + Y
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 130 GSKSDIWSLGCCIYEMTSL 148
+SD+WS G ++E+ +
Sbjct: 201 THQSDVWSYGVTVWELMTF 219
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ F E G + ++ + N F+ +L L + + YL +HRD+ NI
Sbjct: 90 VMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNIL 148
Query: 86 LTKDQDIRLGDFGLAKIL---TSDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLG 139
+ + ++ DFGL++ L +SD +S +G + PE +A + S SD WS G
Sbjct: 149 VNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYG 208
Query: 140 CCIYEMTSLKPAFKAFDM--QALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
++E+ S +DM Q +IN I + P P + L+ +K+ RP
Sbjct: 209 IVMWEVMSFGER-PYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 266
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 163
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 164 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 223
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLK----PAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
D Y +SD+WS G ++E+ SL P K + ++ + P +
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEEFCRRLKEGTRMRAPDYTTPEMY 281
Query: 182 GLVKSMLRKNPELRPSAAELLRHV 205
+ P RP+ +EL+ H+
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKD--QDIRL 94
++ E IKK + FS + K+ +L LD LH N I+H D+K NI L + I++
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 95 GDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKA 154
DFG + + + + Y PE++ YG D+WSLGC + E+ + P
Sbjct: 244 IDFGSS--CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301
Query: 155 FD 156
D
Sbjct: 302 ED 303
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I+ FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 200
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 201 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 260
Query: 126 DIPYGSKSDIWSLGCCIYEMTSL 148
D Y +SD+WS G ++E+ SL
Sbjct: 261 DRVYTIQSDVWSFGVLLWEIFSL 283
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 65 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 115
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 71 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 121
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 182 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 65 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 115
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 95 GGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 154
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS--DDLASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 155 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 214
Query: 126 DIPYGSKSDIWSLGCCIYEMTSL 148
D Y +SD+WS G ++E+ SL
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 4 ISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKAN--SKLFSEEKLCKWLVQ 61
+S R+P +V ER + +I + E G++ + ++ + S E+ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMI-LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTPSY 118
L YLH I+HRDVK NI L ++ ++ DFG++K T D L V GT Y
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
+ PE KSD++S G ++E+ + A
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 59 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 109
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 170 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKD--QDIRL 94
++ E IKK + FS + K+ +L LD LH N I+H D+K NI L + I++
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 95 GDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKA 154
DFG + + + Y PE++ YG D+WSLGC + E+ + P
Sbjct: 244 IDFGSS--CYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301
Query: 155 FD 156
D
Sbjct: 302 ED 303
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ I+ + G + + +K + L Q+ + Y+ + +HRD++ +NI
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL 137
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
+ ++ DFGLA+++ ++ A P + PE + KSD+WS G +
Sbjct: 138 VGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 197
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + + + ++ ++ + P P + L+ +K+PE RP+
Sbjct: 198 ELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPT 252
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 3 LISKIRNPFIVEY-----KDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCK 57
++ ++ NP+IV +SW+ +++ E G + + +++ ++ ++ + +
Sbjct: 61 VMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQ--NRHVKDKNIIE 111
Query: 58 WLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVG 114
+ Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 115 TP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL--KP--AFKAFDMQALINK 163
P + PE + + SKSD+WS G ++E S KP K ++ A++ K
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 26 VCIIIGFCEGGDMAE--AIKKANSKLFSEEK------------LCKWLVQLLMALDYLHA 71
+ +I +C GD+ E ++ +S + S + + Q+ ++YL +
Sbjct: 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 163
Query: 72 NHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD----LASSVVGTPSYMCPELLADI 127
+H++H+D+ N+ + ++++ D GL + + + D L +S++ +M PE +
Sbjct: 164 HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYG 222
Query: 128 PYGSKSDIWSLGCCIYEMTS--LKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVK 185
+ SDIWS G ++E+ S L+P + + Q ++ I V P P L+
Sbjct: 223 KFSIDSDIWSYGVVLWEVFSYGLQP-YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMI 281
Query: 186 SMLRKNPELRP 196
+ P RP
Sbjct: 282 ECWNEFPSRRP 292
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 28 IIIGFCEGGDMAE--AIKKANSKLFSEEK------------LCKWLVQLLMALDYLHANH 73
+I +C GD+ E ++ +S + S + + Q+ ++YL ++H
Sbjct: 89 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH 148
Query: 74 ILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD----LASSVVGTPSYMCPELLADIPY 129
++H+D+ N+ + ++++ D GL + + + D L +S++ +M PE + +
Sbjct: 149 VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKF 207
Query: 130 GSKSDIWSLGCCIYEMTS--LKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSM 187
SDIWS G ++E+ S L+P + + Q ++ I V P P L+
Sbjct: 208 SIDSDIWSYGVVLWEVFSYGLQP-YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIEC 266
Query: 188 LRKNPELRP 196
+ P RP
Sbjct: 267 WNEFPSRRP 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNIL 179
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 240 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 200 ELL 202
+++
Sbjct: 299 QIV 301
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 37 DMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGD 96
D A AI + + S ++L + + +DYL +HR++ NI + ++ ++ D
Sbjct: 123 DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIAD 182
Query: 97 FGLAKILTSDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPA-FK 153
FGL++ + +G +M E L Y + SD+WS G ++E+ SL +
Sbjct: 183 FGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 240
Query: 154 AFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELL 202
L K+ + P L++ R+ P RPS A++L
Sbjct: 241 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 151
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 152 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 211
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 212 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 150 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 209
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 210 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 264
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V I+ E G + ++K +++ F+ +L L + + YL +HRD+ NI
Sbjct: 92 VMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL 150
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFGL+++L D + A + G + PE +A + S SD+WS G
Sbjct: 151 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P ++ + Q +I +++ P P A L+ +K+ RP
Sbjct: 211 LWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 269
Query: 200 ELL 202
+++
Sbjct: 270 QIV 272
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 95 GGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 154
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 155 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 214
Query: 126 DIPYGSKSDIWSLGCCIYEMTSL 148
D Y +SD+WS G ++E+ SL
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V II + E G + +A + N F+ +L L + + YL +HRD+ NI
Sbjct: 105 VMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNIL 163
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFG++++L D + A + G + PE +A + S SD+WS G
Sbjct: 164 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 223
Query: 142 IYEMTSLKPAFKAFDM--QALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +DM Q +I I + P P A L+ +K RP
Sbjct: 224 MWEVMSYGER-PYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFG 282
Query: 200 ELL 202
+++
Sbjct: 283 QIV 285
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 23 GCYVCIIIGFCEGGDMAEAIKKANSKL--------------FSEEKLCKWLVQLLMALDY 68
G + +I FC+ G+++ ++ ++ + E L + Q+ +++
Sbjct: 95 GGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 154
Query: 69 LHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-SYMCPELLA 125
L + +HRD+ NI L++ +++ DFGLA+ + D + P +M PE +
Sbjct: 155 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 214
Query: 126 DIPYGSKSDIWSLGCCIYEMTSLK----PAFKAFDMQALINKINKSIVAPLPTKYSGAFR 181
D Y +SD+WS G ++E+ SL P K + ++ + P +
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--DEEFCRRLKEGTRMRAPDYTTPEMY 272
Query: 182 GLVKSMLRKNPELRPSAAELLRHV 205
+ P RP+ +EL+ H+
Sbjct: 273 QTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L W VQ+ + YL ++HRD+ N+ + +++ DFGLA++L D+ + G
Sbjct: 119 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
Query: 115 TP---SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL 148
+M E + + +SD+WS G I+E+ +
Sbjct: 179 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 215
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V II + E G + +A + N F+ +L L + + YL +HRD+ NI
Sbjct: 90 VMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNIL 148
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFG++++L D + A + G + PE +A + S SD+WS G
Sbjct: 149 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 208
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P + + Q +I I + P P A L+ +K RP
Sbjct: 209 MWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFG 267
Query: 200 ELL 202
+++
Sbjct: 268 QIV 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 151 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 210
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 211 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 147 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 206
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 207 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 261
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 55 LCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVG 114
L W VQ+ + YL ++HRD+ N+ + +++ DFGLA++L D+ + G
Sbjct: 142 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
Query: 115 TP---SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL 148
+M E + + +SD+WS G I+E+ +
Sbjct: 202 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 52 EEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASS 111
E+ LC + Q+ +++L +HRD+ N+ +T + +++ DFGLA+ + SD ++
Sbjct: 172 EDLLC-FAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD--SNY 228
Query: 112 VVGTPS-----YMCPELLADIPYGSKSDIWSLGCCIYEMTSL 148
VV + +M PE L + Y KSD+WS G ++E+ SL
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 24/124 (19%)
Query: 49 LFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-- 106
+EE + L LL+ +++H + I+HRD+K +N L +D +++ DFGLA+ + S+
Sbjct: 125 FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
Query: 107 -----DL----------------ASSVVGTPSYMCPEL-LADIPYGSKSDIWSLGCCIYE 144
DL +S V T Y PEL L Y DIWS GC E
Sbjct: 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAE 244
Query: 145 MTSL 148
+ ++
Sbjct: 245 LLNM 248
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 4 ISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKAN--SKLFSEEKLCKWLVQ 61
+S R+P +V ER + +I + E G++ + ++ + S E+ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMI-LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKI---LTSDDLASSVVGTPSY 118
L YLH I+HRDVK NI L ++ ++ DFG++K L L V GT Y
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 119 MCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAF 152
+ PE KSD++S G ++E+ + A
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
V II + E G + +A + N F+ +L L + + YL +HRD+ NI
Sbjct: 84 VMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNIL 142
Query: 86 LTKDQDIRLGDFGLAKILTSD-DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCC 141
+ + ++ DFG++++L D + A + G + PE +A + S SD+WS G
Sbjct: 143 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 202
Query: 142 IYEMTSL--KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAA 199
++E+ S +P + + Q +I I + P P A L+ +K RP
Sbjct: 203 MWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFG 261
Query: 200 ELL 202
+++
Sbjct: 262 QIV 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 144 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 203
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 204 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 258
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 59 LVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGT 115
L Q+ M + YL + +HRD+ N+ L ++ DFGL+K L +DD A S
Sbjct: 116 LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 116 P-SYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
P + PE + + S+SD+WS G ++E S
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 86 LTKDQDIRLGDFGLAKILT-SDDLASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 40 EAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL 99
EA + + E L + Q+ +++L + +HRD+ NI L++ +++ DFGL
Sbjct: 185 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 244
Query: 100 AKILTSDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSLK----PAF 152
A+ + D + P +M PE + D Y +SD+WS G ++E+ SL P
Sbjct: 245 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 304
Query: 153 KAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
K + ++ + P + + P RP+ +EL+ H+
Sbjct: 305 KI--DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 143 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 202
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 203 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 257
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 144 EM-TSLKPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ T + + +I + + P L++ ++ PE RP+
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 40 EAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL 99
EA + + E L + Q+ +++L + +HRD+ NI L++ +++ DFGL
Sbjct: 187 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 246
Query: 100 AKILTSDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSLK----PAF 152
A+ + D + P +M PE + D Y +SD+WS G ++E+ SL P
Sbjct: 247 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 306
Query: 153 KAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
K + ++ + P + + P RP+ +EL+ H+
Sbjct: 307 KI--DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 40 EAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL 99
EA + + E L + Q+ +++L + +HRD+ NI L++ +++ DFGL
Sbjct: 178 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 237
Query: 100 AKILTSDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSLK----PAF 152
A+ + D + P +M PE + D Y +SD+WS G ++E+ SL P
Sbjct: 238 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 297
Query: 153 KAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
K + ++ + P + + P RP+ +EL+ H+
Sbjct: 298 KI--DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HRD++ +NI
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 137 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 196
Query: 144 EMTS 147
E+ +
Sbjct: 197 EIVT 200
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 40 EAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGL 99
EA + + E L + Q+ +++L + +HRD+ NI L++ +++ DFGL
Sbjct: 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 239
Query: 100 AKILTSDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIYEMTSLK----PAF 152
A+ + D + P +M PE + D Y +SD+WS G ++E+ SL P
Sbjct: 240 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299
Query: 153 KAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHV 205
K + ++ + P + + P RP+ +EL+ H+
Sbjct: 300 KI--DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 65/261 (24%)
Query: 4 ISKIRN-PFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
+SK+ N P IV Y+ +++ + ++ F G + I +E + L +
Sbjct: 63 VSKLFNHPNIVPYRATFIADN-ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGV 121
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS----------DDLASSV 112
L ALDY+H +HR VK S+I ++ D + L GL L+ D
Sbjct: 122 LKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYS 179
Query: 113 VGTPSYMCPELLAD--IPYGSKSDIWSLGCCIYEMTSLKPAFKAFDM---QALINKINKS 167
V ++ PE+L Y +KSDI+S+G E+ + FK DM Q L+ K+N +
Sbjct: 180 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK--DMPATQMLLEKLNGT 237
Query: 168 IVAPLPTK--------------------------------------------YSGAFRGL 183
+ L T +S F
Sbjct: 238 VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHF 297
Query: 184 VKSMLRKNPELRPSAAELLRH 204
V+ L++NP+ RPSA+ LL H
Sbjct: 298 VEQCLQRNPDARPSASTLLNH 318
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQ 61
+++ ++ NP+IV V + + +++ GG + + + ++ + + L Q
Sbjct: 388 QIMHQLDNPYIVRLIG--VCQAEALMLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLHQ 444
Query: 62 LLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD---LASSVVGTP-S 117
+ M + YL + +HR++ N+ L ++ DFGL+K L +DD A S P
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 504
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
+ PE + + S+SD+WS G ++E S
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 65/261 (24%)
Query: 4 ISKIRN-PFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQL 62
+SK+ N P IV Y+ +++ + ++ F G + I +E + L +
Sbjct: 79 VSKLFNHPNIVPYRATFIADN-ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGV 137
Query: 63 LMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTS----------DDLASSV 112
L ALDY+H +HR VK S+I ++ D + L GL L+ D
Sbjct: 138 LKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYS 195
Query: 113 VGTPSYMCPELLAD--IPYGSKSDIWSLGCCIYEMTSLKPAFKAFDM---QALINKINKS 167
V ++ PE+L Y +KSDI+S+G E+ + FK DM Q L+ K+N +
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK--DMPATQMLLEKLNGT 253
Query: 168 IVAPLPTK--------------------------------------------YSGAFRGL 183
+ L T +S F
Sbjct: 254 VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHF 313
Query: 184 VKSMLRKNPELRPSAAELLRH 204
V+ L++NP+ RPSA+ LL H
Sbjct: 314 VEQCLQRNPDARPSASTLLNH 334
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + +++ +L S++ L W +Q+ + YL ++HRD+ N+ + +++
Sbjct: 103 GCLLDHVRENRGRLGSQD-LLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKIT 161
Query: 96 DFGLAKILTSDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCIYEMTSL 148
DFGLA++L D+ G +M E + + +SD+WS G ++E+ +
Sbjct: 162 DFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTF 217
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 61 QLLMALDYLHAN-HILHRDVKCSNIFLTKDQ------DIRLGDFGLAKILTSDDLASSVV 113
QLL+ LDY+H I+H D+K N+ + I++ D G A D+ ++ +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSI 196
Query: 114 GTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
T Y PE+L P+G +DIWS C I+E+ +
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II F G + + +K KL + Q+ + ++ + +HRD++ +NI
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 316
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 317 VSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 376
Query: 144 EMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ + + + +I + + P P ++ + PE RP+
Sbjct: 377 EIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 61 QLLMALDYLHAN-HILHRDVKCSNIFLTKDQ------DIRLGDFGLAKILTSDDLASSVV 113
QLL+ LDY+H I+H D+K N+ + I++ D G A D+ ++ +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSI 196
Query: 114 GTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
T Y PE+L P+G +DIWS C I+E+ +
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 27/127 (21%)
Query: 49 LFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-- 106
+E+ + L LL+ ++H + I+HRD+K +N L +D +++ DFGLA+ + SD
Sbjct: 127 FLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
Query: 107 -----DLA-------------------SSVVGTPSYMCPEL-LADIPYGSKSDIWSLGCC 141
DL +S V T Y PEL L Y + DIWS GC
Sbjct: 187 IHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCI 246
Query: 142 IYEMTSL 148
E+ ++
Sbjct: 247 FAELLNM 253
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLL----MALDYLHANHILHRDVKC 81
+ I++ +GGD ++ ++L K L+Q++ ++YL + +HRD+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARL-----RVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 82 SNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGT----PSYMCPELLADIPYGSKSDIWS 137
N +T+ +++ DFG+++ +D + ++ G + PE L Y S+SD+WS
Sbjct: 242 RNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 138 LGCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRP 196
G ++E SL + + Q + K P P A L++ P RP
Sbjct: 301 FGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRP 360
Query: 197 SAAELLRHVH 206
S + + + +
Sbjct: 361 SFSTIYQELQ 370
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + ++K F L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 99 GSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 96 DFGLAKILTSDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCIYEM-TSLKP 150
DFGL + L +D + P C PE L + SD W G ++EM T +
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 217
Query: 151 AFKAFDMQALINKINK 166
+ + +++KI+K
Sbjct: 218 PWIGLNGSQILHKIDK 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 3 LISKIRNPF--IVEYKDSWVER-GCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWL 59
L+ K+ + F ++ D W ER +V I+ D+ + I + + EE +
Sbjct: 64 LLKKVSSGFSGVIRLLD-WFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSFF 120
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDLASSVVGTPSY 118
Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D + + GT Y
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVY 179
Query: 119 MCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE + Y G + +WSLG +Y+M F+ D + + ++ + S
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF------FRQRVS 232
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 233 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 281
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 53 EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSV 112
+ L +++V + ++YL + + +HRD+ N L +D + + DFGL++ + S D
Sbjct: 137 QTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 113 VGTP---SYMCPELLADIPYGSKSDIWSLGCCIYEMTS 147
+ ++ E LAD Y SD+W+ G ++E+ +
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 2 ELISKIRNPFIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKK--ANSKLFSE------- 52
EL++ +++ IV++ VE G + ++ + + GD+ + ++ ++ L +E
Sbjct: 67 ELLTNLQHEHIVKFYGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 53 --EKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--- 107
++ Q+ + YL + H +HRD+ N + ++ +++GDFG+++ + S D
Sbjct: 126 TQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 108 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEM-TSLKPAFKAFDMQALINKINK 166
+ + +M PE + + ++SD+WSLG ++E+ T K + +I I +
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245
Query: 167 SIVAPLPTKYSGAFRGLVKSMLRKNPELR 195
V P L+ ++ P +R
Sbjct: 246 GRVLQRPRTCPQEVYELMLGCWQREPHMR 274
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-S 117
Q+ + YL ++HRD+ NI + + + +++ DFGL++ + +D + S P
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK 217
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKP-AFKAFDMQALINKINKSIVAPLPTKY 176
+M E L D Y ++SD+WS G ++E+ +L + + L N + P
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNC 277
Query: 177 SGAFRGLVKSMLRKNPELRPSAAEL 201
S L+ ++ P+ RP A++
Sbjct: 278 SEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 3/175 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II F G + + +K KL + Q+ + ++ + +HRD++ +NI
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 143
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 144 VSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 203
Query: 144 EMTSL-KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
E+ + + + +I + + P P ++ + PE RP+
Sbjct: 204 EIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 258
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-S 117
Q+ + YL ++HRD+ NI + + + +++ DFGL++ + +D + S P
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK 217
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKP-AFKAFDMQALINKINKSIVAPLPTKY 176
+M E L D Y ++SD+WS G ++E+ +L + + L N + P
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNC 277
Query: 177 SGAFRGLVKSMLRKNPELRPSAAEL 201
S L+ ++ P+ RP A++
Sbjct: 278 SEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLL----MALDYLHANHILHRDVKC 81
+ I++ +GGD ++ ++L K L+Q++ ++YL + +HRD+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARL-----RVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 82 SNIFLTKDQDIRLGDFGLAKILTSDDLASS--VVGTP-SYMCPELLADIPYGSKSDIWSL 138
N +T+ +++ DFG+++ A+S + P + PE L Y S+SD+WS
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSF 301
Query: 139 GCCIYEMTSLKPA-FKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPS 197
G ++E SL + + Q + K P P A L++ P RPS
Sbjct: 302 GILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
Query: 198 AAELLRHVH 206
+ + + +
Sbjct: 362 FSTIYQELQ 370
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 61 QLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDD--LASSVVGTP-S 117
Q+ + YL ++HRD+ NI + + + +++ DFGL++ + +D + S P
Sbjct: 158 QISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK 217
Query: 118 YMCPELLADIPYGSKSDIWSLGCCIYEMTSLKP-AFKAFDMQALINKINKSIVAPLPTKY 176
+M E L D Y ++SD+WS G ++E+ +L + + L N + P
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNC 277
Query: 177 SGAFRGLVKSMLRKNPELRPSAAEL 201
S L+ ++ P+ RP A++
Sbjct: 278 SEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + E G + + +K + + KL Q+ + ++ + +HR+++ +NI
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL 137
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +
Sbjct: 138 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 197
Query: 144 EMTS 147
E+ +
Sbjct: 198 EIVT 201
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 36/208 (17%)
Query: 35 GGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQD--- 91
GG + I K + F+E + + + ALD+LH I HRD+K NI
Sbjct: 95 GGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152
Query: 92 IRLGDFGLAKILTSDDLASSV--------VGTPSYMCPELLADIP-----YGSKSDIWSL 138
+++ DFGL + + S + G+ YM PE++ Y + D+WSL
Sbjct: 153 VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 139 GCCIYEMTSLKPAF-----------KAFDMQALINKINKSIVA---PLPTK----YSGAF 180
G +Y + S P F + A N + +SI P K S A
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAA 272
Query: 181 RGLVKSMLRKNPELRPSAAELLRHVHLQ 208
+ L+ +L ++ + R SAA++L+H +Q
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + ++K F L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 105 GSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 96 DFGLAKILTSDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCIYEM-TSLKP 150
DFGL + L +D + P C PE L + SD W G ++EM T +
Sbjct: 164 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223
Query: 151 AFKAFDMQALINKINK 166
+ + +++KI+K
Sbjct: 224 PWIGLNGSQILHKIDK 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + ++K F L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 105 GSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 96 DFGLAKILTSDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCIYEM-TSLKP 150
DFGL + L +D + P C PE L + SD W G ++EM T +
Sbjct: 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223
Query: 151 AFKAFDMQALINKINK 166
+ + +++KI+K
Sbjct: 224 PWIGLNGSQILHKIDK 239
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + ++K F L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 99 GSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 96 DFGLAKILTSDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCIYEM-TSLKP 150
DFGL + L +D + P C PE L + SD W G ++EM T +
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 217
Query: 151 AFKAFDMQALINKINK 166
+ + +++KI+K
Sbjct: 218 PWIGLNGSQILHKIDK 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + ++K F L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 95 GSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 96 DFGLAKILTSDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCIYEM-TSLKP 150
DFGL + L +D + P C PE L + SD W G ++EM T +
Sbjct: 154 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
Query: 151 AFKAFDMQALINKINK 166
+ + +++KI+K
Sbjct: 214 PWIGLNGSQILHKIDK 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + ++K F L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 95 GSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 96 DFGLAKILTSDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCIYEM-TSLKP 150
DFGL + L +D + P C PE L + SD W G ++EM T +
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
Query: 151 AFKAFDMQALINKINK 166
+ + +++KI+K
Sbjct: 214 PWIGLNGSQILHKIDK 229
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 36 GDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLG 95
G + + ++K F L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 95 GSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 96 DFGLAKILTSDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCIYEM-TSLKP 150
DFGL + L +D + P C PE L + SD W G ++EM T +
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
Query: 151 AFKAFDMQALINKINK 166
+ + +++KI+K
Sbjct: 214 PWIGLNGSQILHKIDK 229
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 11 FIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLH 70
+IV K ++ R ++C++ ++ + ++ N + S K+ Q+ AL +L
Sbjct: 98 YIVHLKRHFMFRN-HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 155
Query: 71 ANH--ILHRDVKCSNIFLT--KDQDIRLGDFGLAKILTSDDLASSV---VGTPSYMCPEL 123
I+H D+K NI L K I++ DFG +S L + + + Y PE+
Sbjct: 156 TPELSIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQXIQSRFYRSPEV 210
Query: 124 LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAP 171
L +PY D+WSLGC + EM + +P F + +NKI + + P
Sbjct: 211 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 170
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 227
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 185
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 242
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 243 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 184
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 241
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 242 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 296
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 169
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 226
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 227 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 281
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II + G + + +K KL + Q+ + Y+ + +HRD++ +N+
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 142
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
+++ ++ DFGLA+++ ++ A P + PE + + KSD+WS G +Y
Sbjct: 143 VSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLY 202
Query: 144 EMTS 147
E+ +
Sbjct: 203 EIVT 206
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 170
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 227
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 11 FIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLH 70
+IV K ++ R ++C++ ++ + ++ N + S K+ Q+ AL +L
Sbjct: 117 YIVHLKRHFMFRN-HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174
Query: 71 ANH--ILHRDVKCSNIFLT--KDQDIRLGDFGLAKILTSDDLASSV---VGTPSYMCPEL 123
I+H D+K NI L K I++ DFG +S L + + + Y PE+
Sbjct: 175 TPELSIIHCDLKPENILLCNPKRXAIKIVDFG-----SSCQLGQRIYQXIQSRFYRSPEV 229
Query: 124 LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAP 171
L +PY D+WSLGC + EM + +P F + +NKI + + P
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 170
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 227
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 11 FIVEYKDSWVERGCYVCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLH 70
+IV K ++ R ++C++ ++ + ++ N + S K+ Q+ AL +L
Sbjct: 117 YIVHLKRHFMFRN-HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174
Query: 71 ANH--ILHRDVKCSNIFLT--KDQDIRLGDFGLAKILTSDDLASSV---VGTPSYMCPEL 123
I+H D+K NI L K I++ DFG +S L + + + Y PE+
Sbjct: 175 TPELSIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQXIQSRFYRSPEV 229
Query: 124 LADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAP 171
L +PY D+WSLGC + EM + +P F + +NKI + + P
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 185
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 242
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 243 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 212
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 269
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 270 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 3 LISKIRNPF--IVEYKDSWVERGCYVCIIIGFCEG-GDMAEAIKKANSKLFSEEKLCKWL 59
L+ K+ + F ++ D W ER +I+ E D+ + I + + EE +
Sbjct: 107 LLKKVSSGFSGVIRLLD-WFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFF 163
Query: 60 VQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDLASSVVGTPSY 118
Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D + + GT Y
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVY 222
Query: 119 MCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKSIVAPLPTKYS 177
PE + Y G + +WSLG +Y+M F+ D + + ++ + S
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF------FRQRVS 275
Query: 178 GAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 276 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 204
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 261
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 262 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 316
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 184
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 241
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 242 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 296
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 198
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF-- 255
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 256 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 197
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 254
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 255 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 185
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 242
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 243 ----FRQRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 197
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQVF-- 254
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 255 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 198
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF-- 255
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 256 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 197
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF-- 254
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 255 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 192
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF-- 249
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 250 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 304
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 26 VCIIIGFCEGGDMAEAIKKANSKLFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIF 85
+ II F G + + +K KL + Q+ + Y+ + +HRD++ +N+
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 141
Query: 86 LTKDQDIRLGDFGLAKILTSDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCIY 143
+++ ++ DFGLA+++ ++ A P + PE + + KS++WS G +Y
Sbjct: 142 VSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLY 201
Query: 144 EMTS 147
E+ +
Sbjct: 202 EIVT 205
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 57/262 (21%)
Query: 9 NPFIVEYKDS-WVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLMA 65
+P ++ Y S +R Y+ + + D+ E+ + N KL E L Q+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 66 LDYLHANHILHRDVKCSNIFL------TKDQD-------IRLGDFGLAKILTSDDLA--- 109
+ +LH+ I+HRD+K NI + T DQ I + DFGL K L S
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 110 --SSVVGTPSYMCPELLADIP---YGSKSDIWSLGCCIYEMTS----------------L 148
++ GT + PELL + DI+S+GC Y + S +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 149 KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
+ F +M+ L ++S++A L+ M+ +P RP+A ++LRH
Sbjct: 266 RGIFSLDEMKCL---HDRSLIAEATD--------LISQMIDHDPLKRPTAMKVLRHPLFW 314
Query: 209 P------YVLKVHLKLNSPRRN 224
P ++LKV +L R+
Sbjct: 315 PKSKKLEFLLKVSDRLEIENRD 336
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 198
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQVF-- 255
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 256 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 57/262 (21%)
Query: 9 NPFIVEYKDS-WVERGCYVCIIIGFCEGGDMAEA--IKKANSKLFSEEKLCKWLVQLLMA 65
+P ++ Y S +R Y+ + + D+ E+ + N KL E L Q+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 66 LDYLHANHILHRDVKCSNIFL------TKDQD-------IRLGDFGLAKILTSDDLA--- 109
+ +LH+ I+HRD+K NI + T DQ I + DFGL K L S
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 110 --SSVVGTPSYMCPELLADIP---YGSKSDIWSLGCCIYEMTS----------------L 148
++ GT + PELL + DI+S+GC Y + S +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 149 KPAFKAFDMQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQ 208
+ F +M+ L ++S++A L+ M+ +P RP+A ++LRH
Sbjct: 266 RGIFSLDEMKCL---HDRSLIAEATD--------LISQMIDHDPLKRPTAMKVLRHPLFW 314
Query: 209 P------YVLKVHLKLNSPRRN 224
P ++LKV +L R+
Sbjct: 315 PKSKKLEFLLKVSDRLEIENRD 336
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 50 FSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQ-DIRLGDFGLAKILTSDDL 108
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG +L D +
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTV 198
Query: 109 ASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCIYEMTSLKPAFKAFDMQALINKINKS 167
+ GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF-- 255
Query: 168 IVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLRHVHLQPYVL-----KVHLKLNSP 221
+ S + L++ L P RP+ E+ H +Q +L ++HL SP
Sbjct: 256 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,659,971
Number of Sequences: 62578
Number of extensions: 610602
Number of successful extensions: 3886
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1485
Number of HSP's gapped (non-prelim): 1155
length of query: 570
length of database: 14,973,337
effective HSP length: 104
effective length of query: 466
effective length of database: 8,465,225
effective search space: 3944794850
effective search space used: 3944794850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)