Query 008305
Match_columns 570
No_of_seqs 478 out of 2673
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 23:03:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008305.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008305hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 6E-35 2E-39 291.2 32.3 239 260-549 15-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 4.1E-34 1.4E-38 286.5 15.8 239 259-549 15-276 (296)
3 1wfj_A Putative elicitor-respo 99.9 4.8E-21 1.6E-25 168.5 15.4 126 260-396 6-133 (136)
4 2dmh_A Myoferlin; beta-sandwic 99.9 1.5E-20 5E-25 166.2 17.0 128 261-394 4-134 (140)
5 3b7y_A E3 ubiquitin-protein li 99.8 1.8E-20 6.3E-25 168.2 15.7 129 260-393 16-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.8 1.3E-20 4.4E-25 163.4 14.1 120 263-392 2-124 (126)
7 2fk9_A Protein kinase C, ETA t 99.8 1E-20 3.5E-25 168.9 12.6 117 261-392 26-156 (157)
8 1rlw_A Phospholipase A2, CALB 99.8 2.5E-20 8.6E-25 161.5 13.9 120 443-562 2-125 (126)
9 2ep6_A MCTP2 protein; beta san 99.8 1.5E-20 5.3E-25 164.5 12.5 125 258-392 7-131 (133)
10 3m7f_B E3 ubiquitin-protein li 99.8 1.1E-19 3.6E-24 167.2 17.1 129 261-394 5-142 (176)
11 1gmi_A Protein kinase C, epsil 99.8 5.4E-20 1.8E-24 161.7 12.8 117 262-393 4-133 (136)
12 3kwu_A MUNC13-1; calcium bindi 99.8 2.6E-19 8.9E-24 159.7 17.4 122 262-392 15-146 (148)
13 2fk9_A Protein kinase C, ETA t 99.8 1E-19 3.6E-24 162.3 14.6 116 441-561 26-156 (157)
14 2dmh_A Myoferlin; beta-sandwic 99.8 4.7E-19 1.6E-23 156.5 17.7 122 442-566 5-137 (140)
15 1wfj_A Putative elicitor-respo 99.8 5.8E-19 2E-23 155.0 14.7 122 441-565 7-133 (136)
16 3b7y_A E3 ubiquitin-protein li 99.8 1.2E-18 4.1E-23 156.3 16.0 121 441-562 17-153 (153)
17 3kwu_A MUNC13-1; calcium bindi 99.8 3.3E-18 1.1E-22 152.5 18.8 116 441-561 14-146 (148)
18 3pyc_A E3 ubiquitin-protein li 99.8 6E-19 2E-23 154.1 13.4 124 263-391 4-131 (132)
19 1gmi_A Protein kinase C, epsil 99.8 7E-19 2.4E-23 154.5 13.9 117 442-563 4-134 (136)
20 1rsy_A Synaptotagmin I; calciu 99.8 6.5E-19 2.2E-23 157.9 13.5 112 259-371 37-150 (152)
21 3f04_A Synaptotagmin-1; C2A, c 99.8 5.2E-19 1.8E-23 156.8 12.5 111 260-371 30-142 (143)
22 2d8k_A Synaptotagmin VII; exoc 99.8 5.8E-19 2E-23 156.1 11.9 112 260-372 22-136 (141)
23 2ep6_A MCTP2 protein; beta san 99.8 1.4E-18 4.7E-23 152.1 14.1 117 441-562 10-132 (133)
24 2b3r_A Phosphatidylinositol-4- 99.8 1.3E-18 4.6E-23 152.2 13.7 109 261-371 17-130 (134)
25 2nq3_A Itchy homolog E3 ubiqui 99.8 9.8E-19 3.4E-23 159.6 13.2 125 261-394 33-162 (173)
26 2z0u_A WW domain-containing pr 99.8 2E-19 6.9E-24 161.1 8.4 110 260-370 39-154 (155)
27 1rsy_A Synaptotagmin I; calciu 99.8 3.8E-18 1.3E-22 152.8 16.6 107 443-549 41-151 (152)
28 2bwq_A Regulating synaptic mem 99.8 3.3E-18 1.1E-22 148.8 14.8 104 443-547 17-129 (129)
29 2d8k_A Synaptotagmin VII; exoc 99.8 2.8E-18 9.7E-23 151.6 14.5 108 443-550 25-137 (141)
30 3fdw_A Synaptotagmin-like prot 99.8 2.4E-18 8.1E-23 153.5 14.0 108 443-550 22-136 (148)
31 1v27_A Regulating synaptic mem 99.8 1.5E-18 5.2E-23 153.4 12.6 109 443-552 20-137 (141)
32 3m7f_B E3 ubiquitin-protein li 99.8 5.4E-18 1.9E-22 155.7 16.7 121 442-563 6-142 (176)
33 3pyc_A E3 ubiquitin-protein li 99.8 4.2E-18 1.4E-22 148.7 14.8 117 443-561 4-132 (132)
34 2z0u_A WW domain-containing pr 99.8 1.6E-18 5.4E-23 155.3 12.4 105 443-547 42-154 (155)
35 3f04_A Synaptotagmin-1; C2A, c 99.8 6.7E-18 2.3E-22 149.6 15.6 106 443-548 33-142 (143)
36 1rh8_A Piccolo protein; beta-s 99.8 1.3E-18 4.5E-23 154.0 10.9 109 443-551 17-141 (142)
37 3rdl_A Protein kinase C alpha 99.8 3E-18 1E-22 150.6 13.1 110 443-553 15-129 (137)
38 1a25_A CALB, protein kinase C 99.8 1.9E-18 6.4E-23 154.3 11.7 111 443-554 30-145 (149)
39 3fbk_A RGS3, RGP3, regulator o 99.8 6.5E-18 2.2E-22 151.4 14.8 109 443-552 26-141 (153)
40 2b3r_A Phosphatidylinositol-4- 99.8 8.8E-18 3E-22 147.0 14.6 111 441-552 17-134 (134)
41 2bwq_A Regulating synaptic mem 99.8 3.3E-18 1.1E-22 148.7 11.8 108 260-369 14-128 (129)
42 2dmg_A KIAA1228 protein; beta- 99.7 6.5E-18 2.2E-22 149.5 12.5 107 443-550 23-137 (142)
43 3fdw_A Synaptotagmin-like prot 99.7 2.3E-18 8E-23 153.5 9.5 112 260-372 19-135 (148)
44 1wfm_A Synaptotagmin XIII; C2 99.7 2.1E-17 7E-22 145.4 14.9 105 443-550 25-134 (138)
45 1ugk_A Synaptotagmin IV, KIAA1 99.7 4.7E-17 1.6E-21 143.2 17.2 108 443-550 21-135 (138)
46 3rdl_A Protein kinase C alpha 99.7 6.1E-18 2.1E-22 148.7 11.5 110 262-373 14-126 (137)
47 1ugk_A Synaptotagmin IV, KIAA1 99.7 9.8E-18 3.3E-22 147.6 12.7 111 260-371 18-133 (138)
48 2chd_A Rabphilin-3A, exophilin 99.7 7.1E-18 2.4E-22 149.2 11.8 110 261-371 26-140 (142)
49 1a25_A CALB, protein kinase C 99.7 1.2E-17 4.3E-22 148.9 13.1 109 262-372 29-140 (149)
50 2dmg_A KIAA1228 protein; beta- 99.7 2.8E-18 9.5E-23 151.9 8.8 111 260-372 20-136 (142)
51 2chd_A Rabphilin-3A, exophilin 99.7 3.1E-17 1.1E-21 145.1 15.5 107 443-549 28-141 (142)
52 2r83_A Synaptotagmin-1; C2A-C2 99.7 6.9E-17 2.4E-21 160.3 19.8 121 443-563 18-148 (284)
53 1v27_A Regulating synaptic mem 99.7 3.5E-18 1.2E-22 151.0 9.1 111 260-372 17-134 (141)
54 2q3x_A Regulating synaptic mem 99.7 2.6E-17 8.8E-22 150.3 15.1 106 443-549 29-140 (171)
55 2enp_A B/K protein; C2 type 1, 99.7 3.2E-18 1.1E-22 152.5 8.8 112 259-371 21-141 (147)
56 1wfm_A Synaptotagmin XIII; C2 99.7 9.7E-18 3.3E-22 147.5 11.7 109 260-372 22-133 (138)
57 2q3x_A Regulating synaptic mem 99.7 1E-17 3.5E-22 153.0 12.2 110 262-373 28-141 (171)
58 3fbk_A RGS3, RGP3, regulator o 99.7 1.9E-17 6.6E-22 148.4 12.9 111 259-372 22-138 (153)
59 1tjx_A Similar to synaptotagmi 99.7 8.2E-17 2.8E-21 145.3 17.0 108 443-550 24-149 (159)
60 2enp_A B/K protein; C2 type 1, 99.7 2E-17 6.7E-22 147.3 12.4 108 443-550 25-143 (147)
61 3n5a_A Synaptotagmin-7; calciu 99.7 6.5E-17 2.2E-21 142.2 15.3 92 443-534 15-112 (138)
62 2nq3_A Itchy homolog E3 ubiqui 99.7 4.2E-17 1.4E-21 148.7 14.3 121 441-565 33-164 (173)
63 1tjx_A Similar to synaptotagmi 99.7 3.8E-17 1.3E-21 147.5 13.7 113 259-372 20-148 (159)
64 1rh8_A Piccolo protein; beta-s 99.7 2E-18 6.8E-23 152.8 5.0 108 263-371 17-138 (142)
65 2cm5_A Rabphilin-3A; protein t 99.7 1.7E-16 6E-21 144.2 17.4 107 443-549 36-160 (166)
66 1w15_A Synaptotagmin IV; metal 99.7 9.4E-17 3.2E-21 143.9 15.4 91 443-533 29-125 (153)
67 3n5a_A Synaptotagmin-7; calciu 99.7 5.2E-17 1.8E-21 142.9 12.0 97 260-357 12-112 (138)
68 2cm5_A Rabphilin-3A; protein t 99.7 1.3E-16 4.4E-21 145.1 13.9 97 260-357 33-133 (166)
69 1w15_A Synaptotagmin IV; metal 99.7 1.4E-16 4.9E-21 142.7 12.6 96 260-356 26-125 (153)
70 2cjt_A UNC-13 homolog A, MUNC1 99.7 4.7E-16 1.6E-20 135.1 13.1 118 262-391 3-130 (131)
71 3l9b_A Otoferlin; C2-domain, b 99.6 1.3E-15 4.4E-20 130.1 12.9 117 265-394 22-141 (144)
72 3nsj_A Perforin-1; pore formin 99.6 8E-15 2.8E-19 155.9 21.3 164 206-392 317-503 (540)
73 3jzy_A Intersectin 2; C2 domai 99.6 7.1E-16 2.4E-20 166.1 13.2 120 261-392 384-507 (510)
74 1dqv_A Synaptotagmin III; beta 99.6 1.4E-15 4.9E-20 151.7 14.3 121 443-563 19-150 (296)
75 3jzy_A Intersectin 2; C2 domai 99.6 3.4E-15 1.1E-19 160.8 15.4 119 441-561 384-507 (510)
76 2cjs_A UNC-13 homolog A, MUNC1 99.6 6.4E-15 2.2E-19 133.2 14.8 120 262-392 12-140 (167)
77 3l9b_A Otoferlin; C2-domain, b 99.6 2.1E-14 7.3E-19 122.6 14.7 114 444-564 21-142 (144)
78 1cjy_A CPLA2, protein (cytosol 99.6 3.4E-15 1.2E-19 163.5 10.6 111 259-371 13-126 (749)
79 2cjt_A UNC-13 homolog A, MUNC1 99.6 2.5E-14 8.5E-19 124.2 12.7 110 442-560 3-130 (131)
80 1djx_A PLC-D1, phosphoinositid 99.5 8.5E-14 2.9E-18 151.4 17.0 124 262-392 495-623 (624)
81 3nsj_A Perforin-1; pore formin 99.5 1.1E-13 3.6E-18 147.3 16.6 115 442-566 392-508 (540)
82 2cjs_A UNC-13 homolog A, MUNC1 99.5 3.3E-13 1.1E-17 121.9 13.9 114 443-564 13-143 (167)
83 1cjy_A CPLA2, protein (cytosol 99.5 8.2E-14 2.8E-18 152.6 11.4 114 441-556 15-132 (749)
84 1djx_A PLC-D1, phosphoinositid 99.5 6E-13 2E-17 144.8 17.0 118 441-561 494-623 (624)
85 3bxj_A RAS GTPase-activating p 99.4 1.1E-14 3.7E-19 154.5 -0.1 125 261-394 8-158 (483)
86 3bxj_A RAS GTPase-activating p 99.4 5.2E-14 1.8E-18 149.3 0.1 119 442-567 9-162 (483)
87 3pfq_A PKC-B, PKC-beta, protei 99.3 7.6E-12 2.6E-16 138.8 9.7 108 263-372 171-281 (674)
88 3pfq_A PKC-B, PKC-beta, protei 99.2 6.6E-11 2.3E-15 131.2 13.8 106 443-549 171-281 (674)
89 2zkm_X 1-phosphatidylinositol- 99.1 4.2E-10 1.4E-14 125.3 15.4 115 262-391 676-797 (799)
90 3ohm_B 1-phosphatidylinositol- 99.1 3.9E-10 1.3E-14 125.6 14.4 117 263-394 724-846 (885)
91 3qr0_A Phospholipase C-beta (P 99.1 5E-10 1.7E-14 124.1 15.1 117 263-394 649-772 (816)
92 2zkm_X 1-phosphatidylinositol- 99.1 8E-10 2.7E-14 123.1 14.8 111 441-561 675-798 (799)
93 3ohm_B 1-phosphatidylinositol- 99.1 9.1E-10 3.1E-14 122.7 14.4 110 443-562 724-845 (885)
94 3qr0_A Phospholipase C-beta (P 99.0 1.5E-09 5.3E-14 120.2 14.6 110 442-561 648-770 (816)
95 1yrk_A NPKC-delta, protein kin 99.0 4.9E-09 1.7E-13 86.7 13.6 113 263-392 5-124 (126)
96 1yrk_A NPKC-delta, protein kin 99.0 7.5E-09 2.6E-13 85.6 14.0 113 442-561 4-124 (126)
97 2enj_A NPKC-theta, protein kin 98.9 6.4E-09 2.2E-13 87.2 10.7 114 262-392 8-129 (138)
98 2enj_A NPKC-theta, protein kin 98.9 9.8E-09 3.4E-13 86.1 11.2 113 442-561 8-129 (138)
99 3l4c_A Dedicator of cytokinesi 92.6 1.8 6.2E-05 39.5 12.7 55 300-354 78-137 (220)
100 2yrb_A Protein fantom; beta sa 92.2 1 3.5E-05 38.9 10.0 125 261-393 15-150 (156)
101 3l4c_A Dedicator of cytokinesi 89.4 7.4 0.00025 35.5 13.4 56 478-533 77-139 (220)
102 2yrb_A Protein fantom; beta sa 86.7 3.9 0.00013 35.2 9.3 119 442-562 16-150 (156)
103 2wxf_A Phosphatidylinositol-4, 86.3 4.2 0.00014 45.9 11.9 90 443-535 216-325 (940)
104 3hhm_A Phosphatidylinositol-4, 80.7 10 0.00035 43.2 12.0 91 443-535 354-456 (1091)
105 2wxf_A Phosphatidylinositol-4, 79.5 7.1 0.00024 44.0 10.3 94 262-358 215-325 (940)
106 3hhm_A Phosphatidylinositol-4, 73.4 19 0.00066 41.0 11.5 94 263-358 354-456 (1091)
107 1e7u_A Phosphatidylinositol 3- 71.2 20 0.00069 40.4 11.1 92 443-535 217-331 (961)
108 1e7u_A Phosphatidylinositol 3- 70.9 14 0.00047 41.8 9.7 95 263-358 217-331 (961)
109 2knc_B Integrin beta-3; transm 66.4 19 0.00065 27.0 6.6 20 4-23 14-34 (79)
110 2y3a_A Phosphatidylinositol-4, 63.1 7.1 0.00024 44.6 5.4 89 443-534 352-470 (1092)
111 2y3a_A Phosphatidylinositol-4, 61.7 6.2 0.00021 45.1 4.6 94 262-358 351-471 (1092)
112 2k1k_A Ephrin type-A receptor 61.0 6.1 0.00021 25.1 2.6 23 4-26 13-35 (38)
113 1q90_G Cytochrome B6F complex 53.8 13 0.00046 23.0 3.0 21 2-23 4-28 (37)
114 2ks1_B Epidermal growth factor 47.2 5.8 0.0002 26.1 0.8 18 6-23 16-33 (44)
115 1vf5_G Protein PET G; photosyn 43.0 13 0.00043 23.1 1.7 20 3-23 5-28 (37)
116 2jwa_A Receptor tyrosine-prote 42.5 8.8 0.0003 25.2 1.1 9 4-12 14-22 (44)
117 2k9j_B Integrin beta-3; transm 41.7 24 0.00081 23.0 3.1 21 4-24 13-34 (43)
118 2klu_A T-cell surface glycopro 33.9 11 0.00039 26.8 0.6 14 7-20 12-25 (70)
119 2qzq_A Axin interactor, dorsal 26.5 2.9E+02 0.01 23.3 12.4 93 441-536 11-115 (152)
120 1ewf_A BPI, bactericidal/perme 26.4 5E+02 0.017 26.0 13.3 20 166-185 103-122 (456)
121 2qzq_A Axin interactor, dorsal 21.4 3.7E+02 0.013 22.7 8.9 91 265-358 15-114 (152)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=6e-35 Score=291.20 Aligned_cols=239 Identities=30% Similarity=0.507 Sum_probs=203.1
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEEeC
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVFDD 337 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~d~ 337 (570)
....|.|.|+|++|++|+..+..|.+||||++++.+...+.++|+++++++||+|||+|.|.+... ..+.|.|+|||+
T Consensus 15 ~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~ 94 (284)
T 2r83_A 15 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDF 94 (284)
T ss_dssp ETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEEC
T ss_pred ECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEEC
Confidence 457899999999999999999889999999999986656788999999999999999999998643 457899999999
Q ss_pred CCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEEeccCCCCCCCCCCCCccchhhhhhh
Q 008305 338 EGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCPFGTESSLKNPFNSDYSLTTLEKSL 417 (570)
Q Consensus 338 d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 417 (570)
+.. ++|++||++.+++.++..+...+.|++|.+... ......|+|.+.+.|.|
T Consensus 95 d~~-~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~--~~~~~~G~i~l~l~~~p------------------------ 147 (284)
T 2r83_A 95 DRF-SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK--EEQEKLGDICFSLRYVP------------------------ 147 (284)
T ss_dssp CSS-SCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS--CCCCCCCEEEEEEEEET------------------------
T ss_pred CCC-CCCceeEEEEEcchhcccCCcceeEEEeecccc--ccccccccEEEEEEecC------------------------
Confidence 998 889999999999999988888899999975421 12346799999999863
Q ss_pred cccCchhhhhhccccccccCCCcccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC---ceEeCcccCCCCCCeee
Q 008305 418 KSETSRAEAAELGKIATQKKSDVIVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG---NRAKTRVAHDTLNPVWN 494 (570)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~---~~~kT~v~~~t~nP~w~ 494 (570)
..+.|.|+|++|+||+..+..|.+||||++++.... .+++|++++++.||.||
T Consensus 148 ------------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wn 203 (284)
T 2r83_A 148 ------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYN 203 (284)
T ss_dssp ------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEE
T ss_pred ------------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEc
Confidence 247899999999999999999999999999985322 46899999999999999
Q ss_pred eEEEEEeecCC--CcEEEEEEEECCCCCC-ceeEEEEEeccccc------------cCceEEEEEEecCC
Q 008305 495 QTFDFVVEDGQ--HEMLILDVYDHDTFGK-DKMGKCIMTLTRVM------------MEGEIQDSFHIDGT 549 (570)
Q Consensus 495 e~f~f~v~~~~--~~~L~i~V~d~~~~~~-d~lG~~~i~l~~l~------------~~~~~~~w~~L~~~ 549 (570)
|+|.|.+.... ...|.|+|||++..++ ++||++.+++..+. .+....+||+|.+.
T Consensus 204 e~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 204 ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred eeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999986432 4579999999998866 79999999997632 22356899999764
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=4.1e-34 Score=286.47 Aligned_cols=239 Identities=29% Similarity=0.469 Sum_probs=196.6
Q ss_pred ccCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEEe
Q 008305 259 ELKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVFD 336 (570)
Q Consensus 259 ~~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~d 336 (570)
+....|.|.|+|++|++|+.+|..|.+||||++++.+.+.+.++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 3457899999999999999999889999999999965556789999999999999999999998643 24589999999
Q ss_pred CCCCCCCCceEEEEEEE-ccccCC-CeeeEEEEEeeccccccCCCcceeEEEEEEEEEeccCCCCCCCCCCCCccchhhh
Q 008305 337 DEGPMLAPEIIGIAQIA-LKELEP-GKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCPFGTESSLKNPFNSDYSLTTLE 414 (570)
Q Consensus 337 ~d~~~~~d~~lG~~~i~-l~~l~~-~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~ 414 (570)
+|.+ ++|++||++.++ +.++.. ......|++|.... ......|+|.+.+.|.|
T Consensus 95 ~d~~-~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~vsl~y~~--------------------- 149 (296)
T 1dqv_A 95 FDRF-SRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG---SEKADLGELNFSLCYLP--------------------- 149 (296)
T ss_dssp CCSS-SCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS---SCCSCCCEEEEEEEEET---------------------
T ss_pred cCCC-CCCceEEEEEeccccccccCCccceeeecccccc---ccccccceEEEEEEecc---------------------
Confidence 9998 899999999996 444433 33456799986432 23456799999999863
Q ss_pred hhhcccCchhhhhhccccccccCCCcccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC---CceEeCcccCCCCCC
Q 008305 415 KSLKSETSRAEAAELGKIATQKKSDVIVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA---GNRAKTRVAHDTLNP 491 (570)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~---~~~~kT~v~~~t~nP 491 (570)
..|.|.|+|++|+||+..+..|.+||||++++... ..++||++++++.||
T Consensus 150 ---------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP 202 (296)
T 1dqv_A 150 ---------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNP 202 (296)
T ss_dssp ---------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSC
T ss_pred ---------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCC
Confidence 24899999999999999999999999999998521 357899999999999
Q ss_pred eeeeEEEEEeecC--CCcEEEEEEEECCCCCC-ceeEEEEEecccccc-------------CceEEEEEEecCC
Q 008305 492 VWNQTFDFVVEDG--QHEMLILDVYDHDTFGK-DKMGKCIMTLTRVMM-------------EGEIQDSFHIDGT 549 (570)
Q Consensus 492 ~w~e~f~f~v~~~--~~~~L~i~V~d~~~~~~-d~lG~~~i~l~~l~~-------------~~~~~~w~~L~~~ 549 (570)
.|||.|.|.+... ....|.|+|||++..++ ++||++.+++.++.. +....+|++|.+.
T Consensus 203 ~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 203 TYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp EEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred eECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 9999999998643 24579999999999876 699999999987643 2245678888654
No 3
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86 E-value=4.8e-21 Score=168.47 Aligned_cols=126 Identities=31% Similarity=0.551 Sum_probs=111.7
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeC-CCCCCeeecEEEEEEecCCCCeEEEEEEeCC
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTIN-NELNPIWNEHFEFTVEDASTQHLTVRVFDDE 338 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~-~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d 338 (570)
..+.|.|.|+|++|++|+..+..|.+||||++++. .+.++|++++ ++.||+|||+|.|.+.+ ..+.|.|+|||++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~ 81 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCR---TQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKD 81 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESS---SCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSS
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEEC---CccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECC
Confidence 35899999999999999999988999999999997 4578999998 89999999999999986 5579999999999
Q ss_pred CCCCCCceEEEEEEEcccc-CCCeeeEEEEEeeccccccCCCcceeEEEEEEEEEeccC
Q 008305 339 GPMLAPEIIGIAQIALKEL-EPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCPFGT 396 (570)
Q Consensus 339 ~~~~~d~~lG~~~i~l~~l-~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~~~ 396 (570)
.. ++|++||++.+++.++ ..+.....|++|. ..++..|+|+++++|.|...
T Consensus 82 ~~-~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~------~~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 82 VG-TEDDAVGEATIPLEPVFVEGSIPPTAYNVV------KDEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp SC-TTTCCSEEEEEESHHHHHHSEEEEEEEEEE------ETTEEEEEEEEEEEEEECCS
T ss_pred CC-CCCceEEEEEEEHHHhccCCCCCcEEEEee------cCCccCEEEEEEEEEEeCCC
Confidence 98 8899999999999999 4566678999996 24578999999999998644
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.5e-20 Score=166.22 Aligned_cols=128 Identities=30% Similarity=0.489 Sum_probs=109.6
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecC---CCCeEEEEEEeC
Q 008305 261 KPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDA---STQHLTVRVFDD 337 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~---~~~~L~~~v~d~ 337 (570)
...|.|.|+|++|++|+..+. |.+||||++++. .++++|+++++++||+|||+|.|.+..+ ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK---DEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS---SCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC---CEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 357899999999999999998 999999999997 5679999999999999999999999653 357899999999
Q ss_pred CCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEEec
Q 008305 338 EGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCPF 394 (570)
Q Consensus 338 d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 394 (570)
+.. ++|++||++.+++.++..+...+.|+++.+-.. .......|+|+++++|.|.
T Consensus 80 d~~-~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~-~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETI-GQNKLIGTATVALKDLTGDQSRSLPYKLISLLN-EKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCS-SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEEC-TTCCEEEEEEEEEEEECCC
T ss_pred CCC-CCCceEEEEEEEHHHhccCCCceeEEeeeeccC-CCCCCCCCEEEEEEEEECC
Confidence 998 899999999999999988888889998332111 1233567999999999874
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=1.8e-20 Score=168.23 Aligned_cols=129 Identities=25% Similarity=0.428 Sum_probs=104.3
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC---ceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEe
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD---RMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFD 336 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~---~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d 336 (570)
....|.|+|+|++|++|+..+..|.+||||++++.+... +.++|+++++++||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 357899999999999999999889999999999985432 578999999999999999999999864 4689999999
Q ss_pred CCCCCCCCceEEEEEEEccccCCCeee------EEEEEeeccccccCCCcceeEEEEEEEEEe
Q 008305 337 DEGPMLAPEIIGIAQIALKELEPGKVK------DVWLKLVKDVKVQRDTKNRGQVHLELLYCP 393 (570)
Q Consensus 337 ~d~~~~~d~~lG~~~i~l~~l~~~~~~------~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p 393 (570)
++.. ++|++||++.+++.++..+... ..|++|.+.. ...+..|+|+++++|.|
T Consensus 95 ~d~~-~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRL-TRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSS-SCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS---TTCCCCSEEEEEEEECC
T ss_pred CCCC-cCCCeeEEEEEEHHHcccCCCccccccccccccccccc---CCCCcceEEEEEEEEeC
Confidence 9998 8999999999999999765432 5899996542 23467899999999975
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1.3e-20 Score=163.40 Aligned_cols=120 Identities=24% Similarity=0.482 Sum_probs=105.0
Q ss_pred ceEEEEEEEEecCCCCC---CCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeCCC
Q 008305 263 CGTLDVKLVQAKELTNK---DLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFDDEG 339 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~---~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~ 339 (570)
.|.|.|+|++|++|+.. +..|.+||||++++++.+.+.++|+++++++||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 666899999999998544578999999999999999999999976677899999999998
Q ss_pred CCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 340 PMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 340 ~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
. +|++||++.++++++..+.....|++|. ....|.|+++++..
T Consensus 82 ~--~~~~iG~~~i~l~~l~~~~~~~~~~~L~--------~~~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 V--MDETLGTATFTVSSMKVGEKKEVPFIFN--------QVTEMVLEMSLEVA 124 (126)
T ss_dssp S--CCEEEEEEEEEGGGSCTTCEEEEEEEET--------TTEEEEEEEEEECC
T ss_pred C--CCceeEEEEEEHHHccCCCcEEEEEEcC--------CCceEEEEEEEEeC
Confidence 7 5999999999999999998899999994 24678888877653
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=1e-20 Score=168.89 Aligned_cols=117 Identities=23% Similarity=0.328 Sum_probs=101.6
Q ss_pred CCceEEEEEEEEecCCCCCCC----------CCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeE
Q 008305 261 KPCGTLDVKLVQAKELTNKDL----------IGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHL 330 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~----------~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L 330 (570)
...|.|+|+|++|++|+++|. .|.+||||+++++ +.+..+|+++++|+||+|||+|.|.+.+ .+.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~--~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L 101 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD--QVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHL 101 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC--CEeeEEeeecCCCCCCccCcEEEEEcCC--CCEE
Confidence 578999999999999998873 2679999999996 2345799999999999999999999975 3589
Q ss_pred EEEEEeCCCCCCCCceEEEEEEEccccCCC----eeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 331 TVRVFDDEGPMLAPEIIGIAQIALKELEPG----KVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 331 ~~~v~d~d~~~~~d~~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
.|+|||++.+ ++|++||++.|+++++..+ ...+.|++|. ..|+|+++++|.
T Consensus 102 ~~~V~D~d~~-~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~----------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPL-GYDHFVANCTLQFQELLRTTGASDTFEGWVDLE----------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSS-SSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB----------SSCEEEEEEEEC
T ss_pred EEEEEECCCC-CCCCEEEEEEEEHHHhhcccCCCCcccEEEECC----------CCcEEEEEEEEE
Confidence 9999999998 8899999999999999754 6689999993 279999999873
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=2.5e-20 Score=161.53 Aligned_cols=120 Identities=23% Similarity=0.464 Sum_probs=105.9
Q ss_pred ceEEEEEEEEeecCCCC---CCCCCCCcEEEEEEeCC-CceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECCC
Q 008305 443 RGVLSITVIAAENLPKV---DLIGKADPFVVLQLKKA-GNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHDT 518 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~---~~~g~~dpyv~v~~~~~-~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~ 518 (570)
.|.|.|+|++|+||+.. +..|.+||||++++++. ..++||++++++.||.|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 55688999999999642 468899999999999999999999976667899999999998
Q ss_pred CCCceeEEEEEeccccccCceEEEEEEecCCCCeEEEEEEEEEe
Q 008305 519 FGKDKMGKCIMTLTRVMMEGEIQDSFHIDGTKSGKLFLNLKWTP 562 (570)
Q Consensus 519 ~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~~~~~p 562 (570)
.++++||++.++|.++..+.....|++|.+.+.|+|+++++..|
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVAS 125 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECCC
T ss_pred CCCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeCC
Confidence 87789999999999998888889999999977888888876554
No 9
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1.5e-20 Score=164.50 Aligned_cols=125 Identities=30% Similarity=0.533 Sum_probs=109.6
Q ss_pred cccCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeC
Q 008305 258 LELKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFDD 337 (570)
Q Consensus 258 ~~~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~ 337 (570)
.+..+.|.|.|+|++|++|+..+..|.+||||+++++ .+.++|+++++++||+|||+|.|.+.+. .+.|.|+|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG---NDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET---TEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC---CEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 3457899999999999999999988999999999997 5678999999999999999999999865 46899999999
Q ss_pred CCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 338 EGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 338 d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
+.. ++|++||++.+++.++..+. ..|++|.... ......|+|+++++|.
T Consensus 83 d~~-~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~---~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 83 DGD-KPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKD---LEQAFKGVIYLEMDLI 131 (133)
T ss_dssp ETT-EEEEECCBCEEEGGGCCSSC--CEECCCBCSC---TTSCCSSEEEEEEEEE
T ss_pred CCC-CCCCeeEEEEEEHHHccCCC--ceEEEeecCC---CCCccceEEEEEEEEE
Confidence 998 88999999999999997654 5899997542 2346789999999986
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.83 E-value=1.1e-19 Score=167.24 Aligned_cols=129 Identities=25% Similarity=0.429 Sum_probs=102.6
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC---ceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeC
Q 008305 261 KPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD---RMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFDD 337 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~---~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~ 337 (570)
...|.|+|+|++|++|+..+..|.+||||++++..... +.++|+++++++||+|||+|.|.+... .+.|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 46899999999999999999889999999999985433 568999999999999999999999853 46899999999
Q ss_pred CCCCCCCceEEEEEEEccccCCCeee-E-----EEEEeeccccccCCCcceeEEEEEEEEEec
Q 008305 338 EGPMLAPEIIGIAQIALKELEPGKVK-D-----VWLKLVKDVKVQRDTKNRGQVHLELLYCPF 394 (570)
Q Consensus 338 d~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 394 (570)
+.. ++|++||++.++|.++..+... + .|++|.... ..++..|+|++++.|.|.
T Consensus 84 d~~-~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRL-TRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS---TTCCCCSEEEEEEEECC-
T ss_pred CCC-CCCcEEEEEEEEHHHccccCCcccccccccEEEccccC---CCCccCEEEEEEEEEEeC
Confidence 998 8999999999999999865433 2 799997542 244578999999999986
No 11
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.82 E-value=5.4e-20 Score=161.65 Aligned_cols=117 Identities=21% Similarity=0.353 Sum_probs=100.8
Q ss_pred CceEEEEEEEEecCCCCCCCCCC-----------CCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeE
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGK-----------SDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHL 330 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~-----------~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L 330 (570)
..|.|+|+|++|++|++.|..+. +||||+++++ +....+|+++.+|+||+|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~--~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD--DSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC--CeEeeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46999999999999998875444 9999999995 23457899999999999999999999765 789
Q ss_pred EEEEEeCCCCCCCCceEEEEEEEccccCCC--eeeEEEEEeeccccccCCCcceeEEEEEEEEEe
Q 008305 331 TVRVFDDEGPMLAPEIIGIAQIALKELEPG--KVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCP 393 (570)
Q Consensus 331 ~~~v~d~d~~~~~d~~lG~~~i~l~~l~~~--~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p 393 (570)
.|+|||++.. ++|++||++.+++.++..+ ...+.|++|. ..|+|+++++|.+
T Consensus 80 ~~~V~d~d~~-~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~----------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAPI-GYDDFVANCTIQFEELLQNGSRHFEDWIDLE----------PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCSS-SSCEEEEEEEEEHHHHTSTTCSEEEEEEECB----------SSCEEEEEEEEEE
T ss_pred EEEEEeCCCC-CCCCEEEEEEEEHHHhcccCCCCccEEEEcC----------CCeEEEEEEEEEe
Confidence 9999999998 8899999999999999864 3458999883 3799999999975
No 12
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=2.6e-19 Score=159.74 Aligned_cols=122 Identities=30% Similarity=0.546 Sum_probs=105.6
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeCCCC-
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFDDEGP- 340 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~~- 340 (570)
..|.|+|+|++|++|+..+..|.+||||+++++ .+.++|+++.+++||.|||+|.|.+..+. +.|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG---KTKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC---CEEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEEEECCCCc
Confidence 579999999999999999988999999999995 67889999999999999999999998654 7899999999972
Q ss_pred ---------CCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 341 ---------MLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 341 ---------~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
.++|++||++.+++.++. ...+.|++|.+.. ......|+|+++++|.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~---~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRT---DKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSS---TTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCC---CCCCCceEEEEEEEEE
Confidence 158999999999999993 3468999997432 2345789999999985
No 13
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=1e-19 Score=162.32 Aligned_cols=116 Identities=19% Similarity=0.344 Sum_probs=101.2
Q ss_pred ccceEEEEEEEEeecCCCCCC----------CCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecCCCcEEE
Q 008305 441 IVRGVLSITVIAAENLPKVDL----------IGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLI 510 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~----------~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~ 510 (570)
...|.|+|+|++|+||+++|. .|.+||||++.+++ ....||+++++|.||+|||+|.|.+.+ ...|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-VRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-EEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-EeeEEeeecCCCCCCccCcEEEEEcCC--CCEEE
Confidence 457999999999999998873 26799999999963 345799999999999999999999975 46899
Q ss_pred EEEEECCCCCC-ceeEEEEEeccccccC----ceEEEEEEecCCCCeEEEEEEEEE
Q 008305 511 LDVYDHDTFGK-DKMGKCIMTLTRVMME----GEIQDSFHIDGTKSGKLFLNLKWT 561 (570)
Q Consensus 511 i~V~d~~~~~~-d~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~G~i~l~~~~~ 561 (570)
|+|||++..++ |+||++.|+++++..+ ...+.||+|++ +|+|+++++|.
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 99999998875 6999999999999865 56799999986 79999999984
No 14
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=4.7e-19 Score=156.47 Aligned_cols=122 Identities=25% Similarity=0.437 Sum_probs=106.9
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecC---CCcEEEEEEEECCC
Q 008305 442 VRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDG---QHEMLILDVYDHDT 518 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~---~~~~L~i~V~d~~~ 518 (570)
..|.|.|+|++|+||+..+. |.+||||++++.+ .+++|++++++.||+|||+|.|.+... ....|.|+|||++.
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD--EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS--CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC--EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 46899999999999999998 9999999999964 678999999999999999999999753 46789999999998
Q ss_pred CCC-ceeEEEEEeccccccCceEEEEEE---ecCC----CCeEEEEEEEEEecCCC
Q 008305 519 FGK-DKMGKCIMTLTRVMMEGEIQDSFH---IDGT----KSGKLFLNLKWTPQLVL 566 (570)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~---L~~~----~~G~i~l~~~~~p~~~~ 566 (570)
.++ ++||++.+++.++..+.....|++ |.+. ..|+|+++++|.|...-
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~~~ 137 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPSGP 137 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCBSS
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCCCC
Confidence 866 699999999999988888888988 6443 35999999999987653
No 15
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=5.8e-19 Score=155.05 Aligned_cols=122 Identities=25% Similarity=0.490 Sum_probs=106.4
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccC-CCCCCeeeeEEEEEeecCCCcEEEEEEEECCCC
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAH-DTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTF 519 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~ 519 (570)
...|.|.|+|++|++|+..+..|.+||||++++++ .+++|++++ ++.||.|||+|.|.+.+ ....|.|+|||++..
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT--QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS--CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECC--ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCC
Confidence 35799999999999999999889999999999964 567999998 89999999999999986 577899999999988
Q ss_pred CC-ceeEEEEEeccccccCc-eEEEEEEec--CCCCeEEEEEEEEEecCC
Q 008305 520 GK-DKMGKCIMTLTRVMMEG-EIQDSFHID--GTKSGKLFLNLKWTPQLV 565 (570)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~-~~~~w~~L~--~~~~G~i~l~~~~~p~~~ 565 (570)
++ ++||++.++|.++...+ ...+||+|. +...|+|+++++|.|...
T Consensus 84 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 84 TEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp TTTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECCS
T ss_pred CCCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCCC
Confidence 65 69999999999995444 457899985 345799999999999753
No 16
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.79 E-value=1.2e-18 Score=156.34 Aligned_cols=121 Identities=26% Similarity=0.473 Sum_probs=98.6
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC----ceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEEC
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG----NRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDH 516 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~----~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~ 516 (570)
...+.|+|+|++|+||+..+..|.+||||++++.... .+++|++++++.||.|||+|.|.+.. ....|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP-QQHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT-TTCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC-CCCEEEEEEEEC
Confidence 4579999999999999999988999999999997422 57899999999999999999999975 467899999999
Q ss_pred CCCCC-ceeEEEEEeccccccCceE------EEEEEecC-----CCCeEEEEEEEEEe
Q 008305 517 DTFGK-DKMGKCIMTLTRVMMEGEI------QDSFHIDG-----TKSGKLFLNLKWTP 562 (570)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~~~~~------~~w~~L~~-----~~~G~i~l~~~~~p 562 (570)
+..++ ++||++.++|.++...... .+||+|.. ...|+|+++++|.|
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 98865 6999999999999865532 59999964 34799999999986
No 17
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.79 E-value=3.3e-18 Score=152.50 Aligned_cols=116 Identities=28% Similarity=0.512 Sum_probs=101.6
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECCCC-
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTF- 519 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~- 519 (570)
...|.|.|+|++|+||+..+..|.+||||+++++ ..+++|++++++.||.|||+|.|.+.++ .+.|.|+|||++..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~--~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG--KTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDI 90 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET--TEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSH
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC--CEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCc
Confidence 3479999999999999999999999999999994 4788999999999999999999999754 57899999999985
Q ss_pred ----------C-CceeEEEEEeccccccCceEEEEEEecCC-----CCeEEEEEEEEE
Q 008305 520 ----------G-KDKMGKCIMTLTRVMMEGEIQDSFHIDGT-----KSGKLFLNLKWT 561 (570)
Q Consensus 520 ----------~-~d~lG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~i~l~~~~~ 561 (570)
+ +++||++.+++.++ .....+||+|... ..|+|+++++|.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 4 47999999999998 4566899999742 469999999986
No 18
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.79 E-value=6e-19 Score=154.13 Aligned_cols=124 Identities=23% Similarity=0.384 Sum_probs=102.0
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeCCCCCC
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFDDEGPML 342 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~~~~ 342 (570)
...|+|+|++|++|++.|..|.+||||++++.+. .+.++|+++++++||+|||+|.|.+.+.. .|.|+|||++.. +
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~d~d~~-~ 79 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVWNHKKI-H 79 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEEEGGGT-T
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEEECCCC-C
Confidence 4589999999999999999999999999999632 47899999999999999999999998653 599999999988 5
Q ss_pred C---CceEEEEEEEccccC-CCeeeEEEEEeeccccccCCCcceeEEEEEEEE
Q 008305 343 A---PEIIGIAQIALKELE-PGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLY 391 (570)
Q Consensus 343 ~---d~~lG~~~i~l~~l~-~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~ 391 (570)
+ |++||++.+++.++. .......|++|..... .......|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~-~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNP-SDTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSST-TCCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCC-CCCCceeEEEEEEEEc
Confidence 5 899999999999882 2233457889865321 2234579999999875
No 19
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.79 E-value=7e-19 Score=154.53 Aligned_cols=117 Identities=21% Similarity=0.453 Sum_probs=100.9
Q ss_pred cceEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecCCCcEEE
Q 008305 442 VRGVLSITVIAAENLPKVDLIGK-----------ADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLI 510 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~-----------~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~ 510 (570)
..|.|+|+|++|+||+..+..+. +||||++.+++ ....+|+++++|.||.|||+|+|.+.+. ..|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-SRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-EEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-eEeeeeeEECCCcCCccCCEEEEEecCC--CEEE
Confidence 36999999999999998875444 99999999953 3457999999999999999999999764 7899
Q ss_pred EEEEECCCCCC-ceeEEEEEeccccccCc--eEEEEEEecCCCCeEEEEEEEEEec
Q 008305 511 LDVYDHDTFGK-DKMGKCIMTLTRVMMEG--EIQDSFHIDGTKSGKLFLNLKWTPQ 563 (570)
Q Consensus 511 i~V~d~~~~~~-d~lG~~~i~l~~l~~~~--~~~~w~~L~~~~~G~i~l~~~~~p~ 563 (570)
|+|||++..++ ++||++.+++.++..+. ....|++|+. .|+|+++++|.+.
T Consensus 81 ~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEec
Confidence 99999998875 69999999999998653 4589999986 7999999999864
No 20
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=6.5e-19 Score=157.87 Aligned_cols=112 Identities=29% Similarity=0.471 Sum_probs=100.0
Q ss_pred ccCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEEe
Q 008305 259 ELKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVFD 336 (570)
Q Consensus 259 ~~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~d 336 (570)
+....+.|.|+|++|++|+..+..+.+||||++++.+.+.+.++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 3457899999999999999999889999999999986556789999999999999999999988643 35789999999
Q ss_pred CCCCCCCCceEEEEEEEccccCCCeeeEEEEEeec
Q 008305 337 DEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVK 371 (570)
Q Consensus 337 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 371 (570)
++.. ++|++||++.+++.++..+...+.|++|.+
T Consensus 117 ~d~~-~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 117 FDRF-SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CCSS-SCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCC-CCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9998 889999999999999988888899999953
No 21
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.79 E-value=5.2e-19 Score=156.78 Aligned_cols=111 Identities=30% Similarity=0.483 Sum_probs=99.9
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEEeC
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVFDD 337 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~d~ 337 (570)
....|.|.|+|++|++|+..+..+.+||||++++.+.+.+.++|++++++.||+|||+|.|.+... ....|.|+|||+
T Consensus 30 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 109 (143)
T 3f04_A 30 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDF 109 (143)
T ss_dssp ETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEEC
T ss_pred eCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeC
Confidence 357899999999999999999889999999999986666789999999999999999999998633 457899999999
Q ss_pred CCCCCCCceEEEEEEEccccCCCeeeEEEEEeec
Q 008305 338 EGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVK 371 (570)
Q Consensus 338 d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 371 (570)
+.. ++|++||++.++|.++..+...+.|++|.+
T Consensus 110 d~~-~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 110 DRF-SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CSS-SCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCC-CCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 998 899999999999999998888899999953
No 22
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=5.8e-19 Score=156.11 Aligned_cols=112 Identities=31% Similarity=0.473 Sum_probs=99.3
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEec---CCCCeEEEEEEe
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVED---ASTQHLTVRVFD 336 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~---~~~~~L~~~v~d 336 (570)
....+.|.|+|++|++|+..+..|.+||||++++.+.+.+.++|+++++++||+|||+|.|.+.. .....|.|+|||
T Consensus 22 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 101 (141)
T 2d8k_A 22 NFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLD 101 (141)
T ss_dssp CSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEE
T ss_pred eCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEE
Confidence 35688999999999999999988999999999998655678999999999999999999998532 235789999999
Q ss_pred CCCCCCCCceEEEEEEEccccCCCeeeEEEEEeecc
Q 008305 337 DEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKD 372 (570)
Q Consensus 337 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 372 (570)
++.. ++|++||++.+++.++..+...+.|++|.+.
T Consensus 102 ~d~~-~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 102 YDRF-SRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp CCSS-SSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred CCCC-CCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 9998 8899999999999999988888999999654
No 23
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=1.4e-18 Score=152.06 Aligned_cols=117 Identities=29% Similarity=0.540 Sum_probs=102.8
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECCCCC
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTFG 520 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~~ 520 (570)
...|.|.|+|++|++|+..+..|.+||||++++++ .+++|++++++.||.|||+|.|.+.+. ...|.|+|||++..+
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN--DRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDGDK 86 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT--EEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEETTE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC--EEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCCCC
Confidence 56799999999999999999899999999999954 678999999999999999999999753 578999999999886
Q ss_pred C-ceeEEEEEeccccccCceEEEEEEecC-----CCCeEEEEEEEEEe
Q 008305 521 K-DKMGKCIMTLTRVMMEGEIQDSFHIDG-----TKSGKLFLNLKWTP 562 (570)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~~~~w~~L~~-----~~~G~i~l~~~~~p 562 (570)
+ ++||++.+++.++..+. .+||+|.. ...|+|+++++|..
T Consensus 87 ~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 5 79999999999986543 58999964 35799999999864
No 24
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.78 E-value=1.3e-18 Score=152.18 Aligned_cols=109 Identities=20% Similarity=0.351 Sum_probs=95.5
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeC--CCceEEeeeeCCCCCCeeecEEEEE-EecC--CCCeEEEEEE
Q 008305 261 KPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPL--RDRMKTSKTINNELNPIWNEHFEFT-VEDA--STQHLTVRVF 335 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~Wne~f~f~-v~~~--~~~~L~~~v~ 335 (570)
...|.|.|+|++|++|+. +..|.+||||++++.+. ....++|+++++++||+|||+|.|. +... ....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 357899999999999997 66789999999999754 2457899999999999999999999 7532 4578999999
Q ss_pred eCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeec
Q 008305 336 DDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVK 371 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 371 (570)
|++.. +++++||++.++++++..+...+.|++|.+
T Consensus 96 d~d~~-~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 96 SAESL-RENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp ECCSS-SCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred ECCCC-CCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99998 889999999999999988878899999954
No 25
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=9.8e-19 Score=159.60 Aligned_cols=125 Identities=22% Similarity=0.286 Sum_probs=104.2
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeCCCC
Q 008305 261 KPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFDDEGP 340 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~~ 340 (570)
...+.|.|+|++|++|++.+..+.+||||+++++ ++.++|+++++++||+|||+|.|.+.. .+.|.|+|||++..
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~---~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVD---GQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEEC---CEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCC
Confidence 4678999999999999944434559999999997 478999999999999999999999853 67999999999998
Q ss_pred CCCCceEEEEEEEccccCCC---ee--eEEEEEeeccccccCCCcceeEEEEEEEEEec
Q 008305 341 MLAPEIIGIAQIALKELEPG---KV--KDVWLKLVKDVKVQRDTKNRGQVHLELLYCPF 394 (570)
Q Consensus 341 ~~~d~~lG~~~i~l~~l~~~---~~--~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 394 (570)
++|++||++.+++.++..+ .. ...|++|... ....+..|+|.+.+.|.+.
T Consensus 108 -~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~---~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 108 -KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD---KEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp -SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES---SCTTSEEEEEEEEEESEEC
T ss_pred -CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC---CCCCcccEEEEEEEeeeec
Confidence 8999999999999998532 22 2679999754 2244678999999999876
No 26
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=2e-19 Score=161.15 Aligned_cols=110 Identities=18% Similarity=0.236 Sum_probs=96.0
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC---CceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR---DRMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRV 334 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~---~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v 334 (570)
....|.|.|+|++|++|+++|..|.+||||++++.+.. ..+++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 39 ~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V 118 (155)
T 2z0u_A 39 DEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDV 118 (155)
T ss_dssp ETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEE
T ss_pred cCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEE
Confidence 35688999999999999999999999999999998532 2378999999999999999999998642 246899999
Q ss_pred EeCCCCCCCCceEEEEEEEccccCC-CeeeEEEEEee
Q 008305 335 FDDEGPMLAPEIIGIAQIALKELEP-GKVKDVWLKLV 370 (570)
Q Consensus 335 ~d~d~~~~~d~~lG~~~i~l~~l~~-~~~~~~w~~L~ 370 (570)
||+|.. +++++||++.++++++.. +.....|++|.
T Consensus 119 ~d~d~~-~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 119 CTTDRS-HLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEECTT-SCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EECCCC-CCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999998 899999999999999963 56678999985
No 27
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=3.8e-18 Score=152.84 Aligned_cols=107 Identities=30% Similarity=0.510 Sum_probs=94.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECCCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHDTF 519 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~~~ 519 (570)
.+.|.|+|++|+||+..+..+.+||||++++.. +..++||++++++.||.|||+|.|.+... ....|.|+|||++..
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~ 120 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRF 120 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCC
Confidence 589999999999999999889999999999963 34678999999999999999999988632 467899999999988
Q ss_pred CC-ceeEEEEEeccccccCceEEEEEEecCC
Q 008305 520 GK-DKMGKCIMTLTRVMMEGEIQDSFHIDGT 549 (570)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (570)
++ ++||++.++|.++..+....+||+|.+.
T Consensus 121 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 121 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp SCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 65 6999999999999877788999999764
No 28
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=3.3e-18 Score=148.79 Aligned_cols=104 Identities=21% Similarity=0.440 Sum_probs=87.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC---CCceEeCcccCCCCCCeeeeEEEEEee---cCCCcEEEEEEEEC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK---AGNRAKTRVAHDTLNPVWNQTFDFVVE---DGQHEMLILDVYDH 516 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~V~d~ 516 (570)
.+.|.|+|++|+||+..+..|.+||||++++.. +..+++|++++++.||.|||+|.|.+. +.....|.|+|||+
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 589999999999999999999999999999843 246889999999999999999999852 22457899999999
Q ss_pred CCCC---CceeEEEEEeccccccCceEEEEEEec
Q 008305 517 DTFG---KDKMGKCIMTLTRVMMEGEIQDSFHID 547 (570)
Q Consensus 517 ~~~~---~d~lG~~~i~l~~l~~~~~~~~w~~L~ 547 (570)
+..+ +++||++.++|.++.... ..+||+|+
T Consensus 97 d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 97 ARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp -------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred CcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9886 569999999999988765 78999984
No 29
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.8e-18 Score=151.63 Aligned_cols=108 Identities=29% Similarity=0.478 Sum_probs=94.3
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEEee---cCCCcEEEEEEEECCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFVVE---DGQHEMLILDVYDHDT 518 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~V~d~~~ 518 (570)
.+.|.|+|++|+||+..+..|.+||||++++.. +..++||++++++.||.|||+|.|.+. +.....|.|+|||++.
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 104 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR 104 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC
Confidence 588999999999999999889999999999963 346889999999999999999999852 1245789999999998
Q ss_pred CCC-ceeEEEEEeccccccCceEEEEEEecCCC
Q 008305 519 FGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTK 550 (570)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (570)
.++ ++||++.+++.++.......+||+|.+..
T Consensus 105 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 105 FSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 865 69999999999998887789999997654
No 30
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.77 E-value=2.4e-18 Score=153.47 Aligned_cols=108 Identities=19% Similarity=0.437 Sum_probs=93.6
Q ss_pred ceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEeCC---CceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEEC
Q 008305 443 RGVLSITVIAAENLPKVD-LIGKADPFVVLQLKKA---GNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDH 516 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~-~~g~~dpyv~v~~~~~---~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~ 516 (570)
.+.|.|+|++|+||+..+ ..|.+||||++++... ..+++|++++++.||.|||+|.|.+... ....|.|+|||+
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 589999999999999887 5789999999999743 2478999999999999999999998643 345799999999
Q ss_pred CCCCC-ceeEEEEEeccccccCceEEEEEEecCCC
Q 008305 517 DTFGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTK 550 (570)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (570)
+..++ ++||++.++|.++.......+||+|.++.
T Consensus 102 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 102 GRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp CGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred CCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 98876 69999999999998777778999998753
No 31
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=1.5e-18 Score=153.37 Aligned_cols=109 Identities=22% Similarity=0.451 Sum_probs=93.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC---CCceEeCcccCCCCCCeeeeEEEEEe-e--cCCCcEEEEEEEEC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK---AGNRAKTRVAHDTLNPVWNQTFDFVV-E--DGQHEMLILDVYDH 516 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~w~e~f~f~v-~--~~~~~~L~i~V~d~ 516 (570)
.+.|.|+|++|+||+..+..|.+||||++++.. ...+++|++++++.||+|||+|.|.+ . +.....|.|+|||+
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 589999999999999999999999999999832 24678999999999999999999984 3 22457899999999
Q ss_pred CCCC---CceeEEEEEeccccccCceEEEEEEecCCCCe
Q 008305 517 DTFG---KDKMGKCIMTLTRVMMEGEIQDSFHIDGTKSG 552 (570)
Q Consensus 517 ~~~~---~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G 552 (570)
+..+ +++||++.++|.++.... ..+||+|.+...|
T Consensus 100 d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 100 ARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp CSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred CCCcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 9886 469999999999987655 7899999876655
No 32
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=5.4e-18 Score=155.74 Aligned_cols=121 Identities=26% Similarity=0.482 Sum_probs=97.3
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC----ceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECC
Q 008305 442 VRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG----NRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHD 517 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~----~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~ 517 (570)
..|.|.|+|++|++|+..+..|.+||||++++.+.. .+++|++++++.||.|||.|.|.+.. ....|.|+|||++
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d~d 84 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFDEN 84 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEECC
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEECC
Confidence 479999999999999999989999999999997432 56899999999999999999999974 4578999999999
Q ss_pred CCCC-ceeEEEEEeccccccCceE-E-----EEEEecCC-----CCeEEEEEEEEEec
Q 008305 518 TFGK-DKMGKCIMTLTRVMMEGEI-Q-----DSFHIDGT-----KSGKLFLNLKWTPQ 563 (570)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l~~~~~~-~-----~w~~L~~~-----~~G~i~l~~~~~p~ 563 (570)
..++ ++||++.++|.++...... . +||+|... ..|+|+++++|.|.
T Consensus 85 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 85 RLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 8865 6999999999999876543 2 89999643 37999999999986
No 33
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.77 E-value=4.2e-18 Score=148.74 Aligned_cols=117 Identities=21% Similarity=0.394 Sum_probs=99.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECCCCC--
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTFG-- 520 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~~-- 520 (570)
...|+|+|++|++|+..+..|.+||||++++++...+++|++++++.||.|||+|.|.+.+. +.|.|+|||++..+
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 47899999999999999999999999999996545789999999999999999999999764 34999999999876
Q ss_pred --CceeEEEEEeccccc-cCceEEEEEEecCC-------CCeEEEEEEEEE
Q 008305 521 --KDKMGKCIMTLTRVM-MEGEIQDSFHIDGT-------KSGKLFLNLKWT 561 (570)
Q Consensus 521 --~d~lG~~~i~l~~l~-~~~~~~~w~~L~~~-------~~G~i~l~~~~~ 561 (570)
+++||++.+++.++. ......+|++|... ..|+|+++++++
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 479999999999884 33334578998643 279999999864
No 34
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=155.31 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=91.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC----CceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEEC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA----GNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDH 516 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~----~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~ 516 (570)
.+.|+|+|++|+||+.++..|.+||||++++... ..++||+++++|.||+|||+|.|.+... ....|.|+|||+
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~ 121 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTT 121 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEEC
Confidence 5899999999999999999999999999999641 2378999999999999999999998642 356899999999
Q ss_pred CCCCC-ceeEEEEEecccccc-CceEEEEEEec
Q 008305 517 DTFGK-DKMGKCIMTLTRVMM-EGEIQDSFHID 547 (570)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~-~~~~~~w~~L~ 547 (570)
+..++ ++||++.++|.++.. .....+||+|.
T Consensus 122 d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 122 DRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp CTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 99876 699999999999963 55678999985
No 35
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=6.7e-18 Score=149.60 Aligned_cols=106 Identities=30% Similarity=0.513 Sum_probs=94.1
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECCCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHDTF 519 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~~~ 519 (570)
.+.|.|+|++|++|+..+..+.+||||++++.. +..+++|++++++.||.|||+|.|.+... ....|.|+|||++..
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~ 112 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRF 112 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCC
Confidence 589999999999999999889999999999953 34578999999999999999999998632 457899999999998
Q ss_pred CC-ceeEEEEEeccccccCceEEEEEEecC
Q 008305 520 GK-DKMGKCIMTLTRVMMEGEIQDSFHIDG 548 (570)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~ 548 (570)
++ ++||++.++|.++.......+||+|+.
T Consensus 113 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 113 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 65 699999999999988888899999975
No 36
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=1.3e-18 Score=153.97 Aligned_cols=109 Identities=27% Similarity=0.427 Sum_probs=93.9
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC------------ceEeCcccCCCCCCeeeeEEEEE-ee--cCCCc
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG------------NRAKTRVAHDTLNPVWNQTFDFV-VE--DGQHE 507 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~------------~~~kT~v~~~t~nP~w~e~f~f~-v~--~~~~~ 507 (570)
.+.|.|+|++|+||+..+..|.+||||++++.+.. .++||+++++|.||.|||.|.|. +. +....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 37899999999999999999999999999996532 35799999999999999999997 53 22467
Q ss_pred EEEEEEEECCCCCC-ceeEEEEEeccccccCceEEEEEEecCCCC
Q 008305 508 MLILDVYDHDTFGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTKS 551 (570)
Q Consensus 508 ~L~i~V~d~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~ 551 (570)
.|.|+|||++..++ ++||++.++|.++.......+||+|.+...
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 89999999999876 699999999999987777789999987653
No 37
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.77 E-value=3e-18 Score=150.63 Aligned_cols=110 Identities=28% Similarity=0.482 Sum_probs=95.0
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC---CCceEeCcccCCCCCCeeeeEEEEEeecC-CCcEEEEEEEECCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK---AGNRAKTRVAHDTLNPVWNQTFDFVVEDG-QHEMLILDVYDHDT 518 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~w~e~f~f~v~~~-~~~~L~i~V~d~~~ 518 (570)
.+.|.|+|++|+||+..+..|.+||||++++.. ...+++|++++++.||.|||+|.|.+... ....|.|+|||++.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 489999999999999999999999999999953 34678999999999999999999998643 34589999999998
Q ss_pred CCC-ceeEEEEEeccccccCceEEEEEEecCCCCeE
Q 008305 519 FGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTKSGK 553 (570)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~ 553 (570)
.++ ++||++.++|+++.... ..+||+|.+...|+
T Consensus 95 ~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 95 TTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp SSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred CCCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 865 69999999999997765 78999998765443
No 38
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=1.9e-18 Score=154.34 Aligned_cols=111 Identities=29% Similarity=0.512 Sum_probs=95.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC---CceEeCcccCCCCCCeeeeEEEEEeecC-CCcEEEEEEEECCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA---GNRAKTRVAHDTLNPVWNQTFDFVVEDG-QHEMLILDVYDHDT 518 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~---~~~~kT~v~~~t~nP~w~e~f~f~v~~~-~~~~L~i~V~d~~~ 518 (570)
.+.|.|+|++|+||+..+..+.+||||++++... ..++||++++++.||.|||+|.|.+... ....|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 3789999999999999998899999999999742 4678999999999999999999999653 24689999999999
Q ss_pred CCC-ceeEEEEEeccccccCceEEEEEEecCCCCeEE
Q 008305 519 FGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTKSGKL 554 (570)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i 554 (570)
.++ ++||++.++|.++... ...+||+|.+...|++
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 865 6999999999999765 4789999987655543
No 39
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.76 E-value=6.5e-18 Score=151.44 Aligned_cols=109 Identities=21% Similarity=0.387 Sum_probs=92.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC---CCceEeCcccCCCCCCeeeeEEEEEeecC-CCcEEEEEEEECCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK---AGNRAKTRVAHDTLNPVWNQTFDFVVEDG-QHEMLILDVYDHDT 518 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~w~e~f~f~v~~~-~~~~L~i~V~d~~~ 518 (570)
.+.|.|+|++|+||+..+ .|.+||||++++.. ...+++|++++++.||.|||+|.|.+... ....|.|+|||++.
T Consensus 26 ~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 104 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS 104 (153)
T ss_dssp SSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC
Confidence 589999999999999998 69999999999953 23678999999999999999999998422 33569999999998
Q ss_pred CC--CceeEEEEEecccccc-CceEEEEEEecCCCCe
Q 008305 519 FG--KDKMGKCIMTLTRVMM-EGEIQDSFHIDGTKSG 552 (570)
Q Consensus 519 ~~--~d~lG~~~i~l~~l~~-~~~~~~w~~L~~~~~G 552 (570)
.+ +++||++.++|.++.. .....+||+|.+...|
T Consensus 105 ~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 105 QSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp SGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred CCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 75 4699999999999985 5678899999876544
No 40
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.76 E-value=8.8e-18 Score=146.97 Aligned_cols=111 Identities=18% Similarity=0.277 Sum_probs=93.7
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC---CCceEeCcccCCCCCCeeeeEEEEE-eecC--CCcEEEEEEE
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKK---AGNRAKTRVAHDTLNPVWNQTFDFV-VEDG--QHEMLILDVY 514 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~w~e~f~f~-v~~~--~~~~L~i~V~ 514 (570)
...+.|.|+|++|+||+. +..|.+||||++++.. ...++||+++++|.||+|||+|.|. +... ....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 346899999999999997 7788999999999843 2467899999999999999999999 7532 4678999999
Q ss_pred ECCCCCC-ceeEEEEEeccccccCceEEEEEEecCCCCe
Q 008305 515 DHDTFGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTKSG 552 (570)
Q Consensus 515 d~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G 552 (570)
|++..++ ++||++.++|.++..+....+||+|.+.+.|
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC----
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCccCC
Confidence 9998876 6999999999999887788999999887654
No 41
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=3.3e-18 Score=148.72 Aligned_cols=108 Identities=25% Similarity=0.427 Sum_probs=89.9
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--CceEEeeeeCCCCCCeeecEEEEEEe---cCCCCeEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--DRMKTSKTINNELNPIWNEHFEFTVE---DASTQHLTVRV 334 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~Wne~f~f~v~---~~~~~~L~~~v 334 (570)
....|.|.|+|++|++|+..+..|.+||||++++.+.+ ...++|+++++++||+|||+|.|.+. +.....|.|+|
T Consensus 14 ~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V 93 (129)
T 2bwq_A 14 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93 (129)
T ss_dssp ETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEE
T ss_pred ccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEE
Confidence 35678999999999999999988999999999997543 45789999999999999999999853 22356899999
Q ss_pred EeCCCCCCC--CceEEEEEEEccccCCCeeeEEEEEe
Q 008305 335 FDDEGPMLA--PEIIGIAQIALKELEPGKVKDVWLKL 369 (570)
Q Consensus 335 ~d~d~~~~~--d~~lG~~~i~l~~l~~~~~~~~w~~L 369 (570)
||++.. ++ +++||++.+++.++.... .+.|++|
T Consensus 94 ~d~d~~-~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 94 WDQARV-REEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEC--------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EECCcC-cCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999998 66 999999999999997655 7899987
No 42
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=6.5e-18 Score=149.49 Aligned_cols=107 Identities=30% Similarity=0.422 Sum_probs=91.9
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC---CceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA---GNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHD 517 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~---~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~ 517 (570)
.+.|.|+|++|+||+..+..| +||||++++... ..+++|++++++.||+|||+|.|.+... ....|.|+|||++
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 101 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSG 101 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECC
Confidence 588999999999999999888 999999999532 2578999999999999999999998532 3458999999999
Q ss_pred CCC--C-ceeEEEEEeccccccCceEEEEEEecCCC
Q 008305 518 TFG--K-DKMGKCIMTLTRVMMEGEIQDSFHIDGTK 550 (570)
Q Consensus 518 ~~~--~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (570)
..+ + ++||++.++|.++.......+||+|.+..
T Consensus 102 ~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 102 GFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp CSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred CccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 874 3 59999999999998777778999997653
No 43
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.75 E-value=2.3e-18 Score=153.52 Aligned_cols=112 Identities=18% Similarity=0.330 Sum_probs=97.6
Q ss_pred cCCceEEEEEEEEecCCCCCC-CCCCCCcEEEEEEEeCCC--ceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKD-LIGKSDPFVVIFVRPLRD--RMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRV 334 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~-~~g~~dpyv~v~l~~~~~--~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v 334 (570)
....|.|.|+|++|++|+..+ ..|.+||||++++.+... .+++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 19 ~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V 98 (148)
T 3fdw_A 19 EQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSV 98 (148)
T ss_dssp ETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEE
T ss_pred eCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEE
Confidence 456899999999999999887 578999999999986543 378999999999999999999998654 245799999
Q ss_pred EeCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeecc
Q 008305 335 FDDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKD 372 (570)
Q Consensus 335 ~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 372 (570)
||++.. ++|++||++.++|.++..+.....|++|.+.
T Consensus 99 ~d~d~~-~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 99 WHHGRF-GRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEECGG-GCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EECCCC-cCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 999998 8899999999999999877677899999754
No 44
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=2.1e-17 Score=145.43 Aligned_cols=105 Identities=15% Similarity=0.204 Sum_probs=89.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC--CCceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK--AGNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHDT 518 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~--~~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~~ 518 (570)
.+.|.|+|++|++ .+..|.+||||++++.. +..++||++++++.||+|||+|.|.+... ....|.|+|||++.
T Consensus 25 ~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~ 101 (138)
T 1wfm_A 25 KAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR 101 (138)
T ss_dssp TTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC
Confidence 5899999999994 57788999999999953 23468999999999999999999998643 35689999999998
Q ss_pred CCC-ceeEEEEEeccccccCceEEEEEEecCCC
Q 008305 519 FGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTK 550 (570)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (570)
+++ ++||++.++|.++.......+|++|....
T Consensus 102 ~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 102 FSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp SCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 866 79999999999997666778999998654
No 45
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=4.7e-17 Score=143.21 Aligned_cols=108 Identities=23% Similarity=0.441 Sum_probs=91.4
Q ss_pred ceEEEEEEEEeecCCCCCCC-CCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEE-eecC--CCcEEEEEEEECC
Q 008305 443 RGVLSITVIAAENLPKVDLI-GKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFV-VEDG--QHEMLILDVYDHD 517 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~-g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~-v~~~--~~~~L~i~V~d~~ 517 (570)
.+.|.|+|++|+||+..+.. |.+||||++++.. +..+++|++++++.||+|||+|.|. +... ....|.|+|||++
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d 100 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFD 100 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECC
Confidence 58999999999999999985 8999999999974 3478999999999999999999996 6432 3468999999999
Q ss_pred CCCC-ceeEEEEEeccccccCc-eEEEEEEecCCC
Q 008305 518 TFGK-DKMGKCIMTLTRVMMEG-EIQDSFHIDGTK 550 (570)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l~~~~-~~~~w~~L~~~~ 550 (570)
..++ ++||++.++|.++.... ....|++|+...
T Consensus 101 ~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 101 RFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp SSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred CCCCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 8865 69999999999998654 446678987653
No 46
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=6.1e-18 Score=148.67 Aligned_cols=110 Identities=29% Similarity=0.483 Sum_probs=96.1
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeC--CCceEEeeeeCCCCCCeeecEEEEEEecCC-CCeEEEEEEeCC
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPL--RDRMKTSKTINNELNPIWNEHFEFTVEDAS-TQHLTVRVFDDE 338 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~-~~~L~~~v~d~d 338 (570)
..|.|.|+|++|++|+..+..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 46899999999999999998899999999999743 345789999999999999999999986532 358999999999
Q ss_pred CCCCCCceEEEEEEEccccCCCeeeEEEEEeeccc
Q 008305 339 GPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDV 373 (570)
Q Consensus 339 ~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 373 (570)
.. ++|++||++.++++++..+. ...|++|.+..
T Consensus 94 ~~-~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~ 126 (137)
T 3rdl_A 94 RT-TRNDFMGSLSFGVSELMKMP-ASGWYKLLNQE 126 (137)
T ss_dssp SS-SCCEEEEEEEEEHHHHHHSC-EEEEEECBCHH
T ss_pred CC-CCCceEEEEEEeHHHhccCc-cCceEECcCcc
Confidence 98 89999999999999997665 78999997543
No 47
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=9.8e-18 Score=147.58 Aligned_cols=111 Identities=18% Similarity=0.270 Sum_probs=95.0
Q ss_pred cCCceEEEEEEEEecCCCCCCCC-CCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEE-EecC--CCCeEEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLI-GKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFT-VEDA--STQHLTVRVF 335 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~-g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~-v~~~--~~~~L~~~v~ 335 (570)
....|.|.|+|++|++|+..+.. +.+||||++++.+.+.+.++|+++++++||+|||+|.|. +... ....|.|+||
T Consensus 18 ~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~ 97 (138)
T 1ugk_A 18 NFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTIL 97 (138)
T ss_dssp EGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEE
T ss_pred ECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEE
Confidence 35688999999999999999985 899999999998655678999999999999999999995 5432 3468999999
Q ss_pred eCCCCCCCCceEEEEEEEccccCCCe-eeEEEEEeec
Q 008305 336 DDEGPMLAPEIIGIAQIALKELEPGK-VKDVWLKLVK 371 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l~~~~-~~~~w~~L~~ 371 (570)
|++.. ++|++||++.++|.++..+. ....|++|.+
T Consensus 98 d~d~~-~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 98 SFDRF-SRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EECSS-CCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred ECCCC-CCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 99998 89999999999999997754 3456788853
No 48
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=7.1e-18 Score=149.23 Aligned_cols=110 Identities=26% Similarity=0.468 Sum_probs=96.5
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--CceEEeeeeCCCCCCeeecEEEEE-EecC--CCCeEEEEEE
Q 008305 261 KPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--DRMKTSKTINNELNPIWNEHFEFT-VEDA--STQHLTVRVF 335 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~Wne~f~f~-v~~~--~~~~L~~~v~ 335 (570)
.+.|.|.|+|++|++|+..+..|.+||||++++.+.. ...++|+++++++||+|||+|.|. +... ....|.|+||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 5788999999999999999988999999999998532 357899999999999999999998 5422 2368999999
Q ss_pred eCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeec
Q 008305 336 DDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVK 371 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 371 (570)
|++.. ++|++||++.+++.++..+.....|++|..
T Consensus 106 d~d~~-~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKF-GHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EECTT-SCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ECCCC-CCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99998 889999999999999998888889998854
No 49
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.2e-17 Score=148.94 Aligned_cols=109 Identities=30% Similarity=0.501 Sum_probs=95.4
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--CceEEeeeeCCCCCCeeecEEEEEEecCC-CCeEEEEEEeCC
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--DRMKTSKTINNELNPIWNEHFEFTVEDAS-TQHLTVRVFDDE 338 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~Wne~f~f~v~~~~-~~~L~~~v~d~d 338 (570)
..|.|.|+|++|++|+..+..+.+||||++++.+.. ...++|+++++++||+|||+|.|.+.... ...|.|+|||++
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 357899999999999999988999999999998532 35789999999999999999999987532 358999999999
Q ss_pred CCCCCCceEEEEEEEccccCCCeeeEEEEEeecc
Q 008305 339 GPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKD 372 (570)
Q Consensus 339 ~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 372 (570)
.. ++|++||++.+++.++..+. .+.|++|.+.
T Consensus 109 ~~-~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 140 (149)
T 1a25_A 109 LT-SRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 140 (149)
T ss_dssp SS-SCCEEEEEEEEEHHHHTTCC-EEEEEECBCH
T ss_pred CC-CCCCEEEEEEEEHHHhCcCc-cCCeEEccCC
Confidence 98 88999999999999998764 7899999653
No 50
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=2.8e-18 Score=151.88 Aligned_cols=111 Identities=25% Similarity=0.406 Sum_probs=95.2
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC--ceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD--RMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVF 335 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~--~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~ 335 (570)
....|.|.|+|++|++|+..+..| +||||++++.+.+. ..++|+++++++||+|||+|.|.+... ....|.|+||
T Consensus 20 ~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 98 (142)
T 2dmg_A 20 SSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVK 98 (142)
T ss_dssp ETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEE
T ss_pred eCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEE
Confidence 356889999999999999999888 99999999985444 678999999999999999999998532 3358999999
Q ss_pred eCCCCCCC--CceEEEEEEEccccCCCeeeEEEEEeecc
Q 008305 336 DDEGPMLA--PEIIGIAQIALKELEPGKVKDVWLKLVKD 372 (570)
Q Consensus 336 d~d~~~~~--d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 372 (570)
|++.. +. |++||++.+++.++..+.....|++|.+.
T Consensus 99 d~d~~-~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 99 NSGGF-LSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp ECCCS-SCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred ECCCc-cccCCcEEEEEEEecccccccccccceeeccCC
Confidence 99987 53 57999999999999877678899999653
No 51
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=3.1e-17 Score=145.11 Aligned_cols=107 Identities=29% Similarity=0.521 Sum_probs=92.9
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC---CceEeCcccCCCCCCeeeeEEEEE-eecC--CCcEEEEEEEEC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA---GNRAKTRVAHDTLNPVWNQTFDFV-VEDG--QHEMLILDVYDH 516 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~---~~~~kT~v~~~t~nP~w~e~f~f~-v~~~--~~~~L~i~V~d~ 516 (570)
.+.|.|+|++|+||+..+..|.+||||++++.+. ..++||++++++.||.|||+|.|. +... ....|.|+|||+
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 107 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDE 107 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEEC
Confidence 5899999999999999998899999999999742 368899999999999999999998 5421 236899999999
Q ss_pred CCCCC-ceeEEEEEeccccccCceEEEEEEecCC
Q 008305 517 DTFGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGT 549 (570)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (570)
+..++ ++||++.+++.++..+.....|++|+..
T Consensus 108 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~p 141 (142)
T 2chd_A 108 DKFGHNEFIGETRFSLKKLKANQRKNFNICLERV 141 (142)
T ss_dssp CTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBCC
T ss_pred CCCCCCcEEEEEEEEHHHcCCCCccEEEEecccC
Confidence 98876 6999999999999887777888888753
No 52
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=6.9e-17 Score=160.35 Aligned_cols=121 Identities=30% Similarity=0.540 Sum_probs=106.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECCCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHDTF 519 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~~~ 519 (570)
.+.|.|+|++|+||+..+..|.+||||++++.. ...+++|++++++.||.|||+|.|.+... ....|.|+|||++..
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 589999999999999999899999999999974 24578999999999999999999998643 457899999999988
Q ss_pred CC-ceeEEEEEeccccccCceEEEEEEecCC------CCeEEEEEEEEEec
Q 008305 520 GK-DKMGKCIMTLTRVMMEGEIQDSFHIDGT------KSGKLFLNLKWTPQ 563 (570)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~------~~G~i~l~~~~~p~ 563 (570)
++ ++||++.++|.++..+....+|++|... ..|+|++.++|.|.
T Consensus 98 ~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT 148 (284)
T ss_dssp SCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred CCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCc
Confidence 65 7999999999999888888999999643 46999999999864
No 53
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=3.5e-18 Score=151.05 Aligned_cols=111 Identities=24% Similarity=0.419 Sum_probs=95.1
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--CceEEeeeeCCCCCCeeecEEEEEE-e--cCCCCeEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--DRMKTSKTINNELNPIWNEHFEFTV-E--DASTQHLTVRV 334 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~Wne~f~f~v-~--~~~~~~L~~~v 334 (570)
....+.|.|+|++|++|+..+..|.+||||++++.+.+ .+.++|+++++++||+|||+|.|.+ . +.....|.|+|
T Consensus 17 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 96 (141)
T 1v27_A 17 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 96 (141)
T ss_dssp ETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEE
T ss_pred eCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEE
Confidence 35678999999999999999988999999999996432 4578999999999999999999985 3 22347899999
Q ss_pred EeCCCCCCC--CceEEEEEEEccccCCCeeeEEEEEeecc
Q 008305 335 FDDEGPMLA--PEIIGIAQIALKELEPGKVKDVWLKLVKD 372 (570)
Q Consensus 335 ~d~d~~~~~--d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 372 (570)
||++.. ++ +++||++.+++.++.... ...|++|.+.
T Consensus 97 ~d~d~~-~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~ 134 (141)
T 1v27_A 97 WDQARV-REEESEFLGEILIELETALLDD-EPHWYKLQTH 134 (141)
T ss_dssp EEBCSS-SSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCC
T ss_pred EECCCC-cCCCCceEEEEEEEccccCCCC-CCceEECccc
Confidence 999998 65 999999999999997655 7899999754
No 54
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.74 E-value=2.6e-17 Score=150.34 Aligned_cols=106 Identities=25% Similarity=0.368 Sum_probs=92.4
Q ss_pred ceEEEEEEEEeecCCCCCC-CCCCCcEEEEEEeCCC---ceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEE-ECC
Q 008305 443 RGVLSITVIAAENLPKVDL-IGKADPFVVLQLKKAG---NRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVY-DHD 517 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~-~g~~dpyv~v~~~~~~---~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~-d~~ 517 (570)
.+.|.|+|++|+||+..+. .|.+||||++++.... .++||++++++.||+|||+|.|.+. .....|.|+|| |++
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~-~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDES-PQGKVLQVIVWGDYG 107 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSC-CTTEEEEEEEEEECS
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEec-CCCCEEEEEEEEcCC
Confidence 4889999999999999985 6899999999997533 3789999999999999999999985 35688999999 999
Q ss_pred CCCC-ceeEEEEEeccccccCceEEEEEEecCC
Q 008305 518 TFGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGT 549 (570)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (570)
..++ ++||++.++|.++..+....+||+|.+.
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 8876 6999999999999877788999999765
No 55
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=3.2e-18 Score=152.47 Aligned_cols=112 Identities=21% Similarity=0.320 Sum_probs=95.6
Q ss_pred ccCCceEEEEEEEEecCCCCC-CC------CCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecC--CCCe
Q 008305 259 ELKPCGTLDVKLVQAKELTNK-DL------IGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDA--STQH 329 (570)
Q Consensus 259 ~~~~~G~L~V~V~~A~~L~~~-~~------~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~ 329 (570)
+....|.|.|+|++|++|+.. +. .+.+||||++++.+...+.++|+++++++||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 345789999999999999984 33 35899999999986556788999999999999999999998642 2358
Q ss_pred EEEEEEeCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeec
Q 008305 330 LTVRVFDDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVK 371 (570)
Q Consensus 330 L~~~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 371 (570)
|.|+|||++.. ++|++||++.++|.++..+.....|+.|.+
T Consensus 101 L~~~V~d~d~~-~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 101 LLLTVVDFDKF-SRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEEEECCSTT-CCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEEEECCCC-cCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999999998 889999999999999987766788999864
No 56
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=9.7e-18 Score=147.53 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=93.2
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeC-CCceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEEe
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPL-RDRMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVFD 336 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~-~~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~d 336 (570)
....|.|.|+|++|++ ++..|.+||||++++.+. +...++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 22 ~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d 98 (138)
T 1wfm_A 22 DCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRT 98 (138)
T ss_dssp ETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEE
T ss_pred eCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEE
Confidence 3567899999999993 677889999999999753 23468999999999999999999998643 24689999999
Q ss_pred CCCCCCCCceEEEEEEEccccCCCeeeEEEEEeecc
Q 008305 337 DEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKD 372 (570)
Q Consensus 337 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 372 (570)
+|.+ ++|++||++.++|.++..+.....|++|.+.
T Consensus 99 ~d~~-~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 99 CDRF-SRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp CCSS-CTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CCCC-CCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 9998 8999999999999999766677899999653
No 57
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.74 E-value=1e-17 Score=153.02 Aligned_cols=110 Identities=25% Similarity=0.385 Sum_probs=95.9
Q ss_pred CceEEEEEEEEecCCCCCCC-CCCCCcEEEEEEEeCCC--ceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEE-eC
Q 008305 262 PCGTLDVKLVQAKELTNKDL-IGKSDPFVVIFVRPLRD--RMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVF-DD 337 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~-~g~~dpyv~v~l~~~~~--~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~-d~ 337 (570)
..|.|.|+|++|++|+..|. .|.+||||++++.+.+. ..++|+++++++||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 47899999999999999985 68999999999986432 37899999999999999999999864 4578999999 99
Q ss_pred CCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccc
Q 008305 338 EGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDV 373 (570)
Q Consensus 338 d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 373 (570)
+.. ++|++||++.++|.++..+...+.|++|.+..
T Consensus 107 d~~-~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 107 GRM-DHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp STT-CSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCC-CCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 998 88999999999999998777789999997653
No 58
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.73 E-value=1.9e-17 Score=148.36 Aligned_cols=111 Identities=26% Similarity=0.413 Sum_probs=95.2
Q ss_pred ccCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--CceEEeeeeCCCCCCeeecEEEEEEe--cCCCCeEEEEE
Q 008305 259 ELKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--DRMKTSKTINNELNPIWNEHFEFTVE--DASTQHLTVRV 334 (570)
Q Consensus 259 ~~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~Wne~f~f~v~--~~~~~~L~~~v 334 (570)
+....|.|.|+|++|++|+..+ .|.+||||++++.+.. ...++|+++++++||+|||+|.|.+. +.. ..|.|+|
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~L~i~V 99 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQ-KRLLVTV 99 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTT-SEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhC-CEEEEEE
Confidence 3457899999999999999998 6899999999997532 35789999999999999999999983 333 5699999
Q ss_pred EeCCCCCCC-CceEEEEEEEccccCC-CeeeEEEEEeecc
Q 008305 335 FDDEGPMLA-PEIIGIAQIALKELEP-GKVKDVWLKLVKD 372 (570)
Q Consensus 335 ~d~d~~~~~-d~~lG~~~i~l~~l~~-~~~~~~w~~L~~~ 372 (570)
||++.. ++ |++||++.+++.++.. +.....|++|.+.
T Consensus 100 ~d~d~~-~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 100 WNRASQ-SRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp EECCSS-GGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred EeCCCC-CCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 999997 66 9999999999999984 6778899999764
No 59
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.73 E-value=8.2e-17 Score=145.28 Aligned_cols=108 Identities=31% Similarity=0.551 Sum_probs=90.9
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC---ceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG---NRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHD 517 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~---~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~ 517 (570)
.+.|.|+|++|+||+..+..|.+||||++++.... .+++|++++++.||.|||+|.|.+... ....|.|+|||++
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 103 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 103 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECC
Confidence 58999999999999999988999999999996432 478999999999999999999998643 2467999999999
Q ss_pred CCCC-ceeEEEEEecccc----------cc--CceEEEEEEecCCC
Q 008305 518 TFGK-DKMGKCIMTLTRV----------MM--EGEIQDSFHIDGTK 550 (570)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l----------~~--~~~~~~w~~L~~~~ 550 (570)
..++ ++||++.+++..+ .. .....+||+|.+..
T Consensus 104 ~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 104 KIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp SSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred CCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 8865 6999999999853 32 34568999997643
No 60
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=2e-17 Score=147.30 Aligned_cols=108 Identities=25% Similarity=0.342 Sum_probs=91.1
Q ss_pred ceEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEE
Q 008305 443 RGVLSITVIAAENLPKV-DL------IGKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILD 512 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~-~~------~g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~ 512 (570)
.+.|.|+|++|+||+.. +. .|.+||||++++.. ...+++|++++++.||+|||+|.|.+... ....|.|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~ 104 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLT 104 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEE
Confidence 58999999999999984 33 35899999999964 23578999999999999999999998632 24589999
Q ss_pred EEECCCCCC-ceeEEEEEeccccccCceEEEEEEecCCC
Q 008305 513 VYDHDTFGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTK 550 (570)
Q Consensus 513 V~d~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (570)
|||++..++ ++||++.++|.++........|++|.+..
T Consensus 105 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 143 (147)
T 2enp_A 105 VVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSG 143 (147)
T ss_dssp EECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCCC
T ss_pred EEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecCC
Confidence 999998866 69999999999998777778999998653
No 61
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.73 E-value=6.5e-17 Score=142.23 Aligned_cols=92 Identities=27% Similarity=0.517 Sum_probs=80.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC---ceEeCcccCCCCCCeeeeEEEEEeecCC--CcEEEEEEEECC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG---NRAKTRVAHDTLNPVWNQTFDFVVEDGQ--HEMLILDVYDHD 517 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~---~~~kT~v~~~t~nP~w~e~f~f~v~~~~--~~~L~i~V~d~~ 517 (570)
.+.|.|+|++|+||+..+..|.+||||++++.+.. .+++|++++++.||.|||+|.|.+.... ...|.|+|||++
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~ 94 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKD 94 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECC
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECC
Confidence 58999999999999999988999999999996432 4789999999999999999999986432 368999999999
Q ss_pred CCCC-ceeEEEEEecccc
Q 008305 518 TFGK-DKMGKCIMTLTRV 534 (570)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l 534 (570)
..++ ++||++.+++.++
T Consensus 95 ~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 95 KLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp SSSCCEEEEEEEESSSSC
T ss_pred CCCCCcEEEEEEEccccC
Confidence 8865 6999999999964
No 62
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=4.2e-17 Score=148.75 Aligned_cols=121 Identities=21% Similarity=0.315 Sum_probs=100.0
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECCCCC
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTFG 520 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~~ 520 (570)
...+.|.|+|++|++|+..+..+.+||||++++++ .++||++++++.||+|||+|.|.+. ....|.|+|||++..+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~--~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V~D~d~~~ 108 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG--QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRVWSHQTLK 108 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT--EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEEEECCSSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECC--EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEEEEECCCCC
Confidence 34689999999999999444445599999999964 8899999999999999999999985 3788999999999886
Q ss_pred C-ceeEEEEEeccccccCc-----eEEEEEEecCC-----CCeEEEEEEEEEecCC
Q 008305 521 K-DKMGKCIMTLTRVMMEG-----EIQDSFHIDGT-----KSGKLFLNLKWTPQLV 565 (570)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~-----~~~~w~~L~~~-----~~G~i~l~~~~~p~~~ 565 (570)
+ ++||++.++|.++.... ....|++|... ..|+|.+.+++.+...
T Consensus 109 ~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~~ 164 (173)
T 2nq3_A 109 SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLES 164 (173)
T ss_dssp CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC-
T ss_pred CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecch
Confidence 6 69999999999987432 23679999653 3799999999987643
No 63
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=3.8e-17 Score=147.47 Aligned_cols=113 Identities=27% Similarity=0.413 Sum_probs=95.4
Q ss_pred ccCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC--ceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEE
Q 008305 259 ELKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD--RMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRV 334 (570)
Q Consensus 259 ~~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~--~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v 334 (570)
+....|.|.|+|++|++|+..+..|.+||||++++.+.+. ..++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 3457899999999999999999889999999999985432 468999999999999999999998643 245799999
Q ss_pred EeCCCCCCCCceEEEEEEEcccc------------CCCeeeEEEEEeecc
Q 008305 335 FDDEGPMLAPEIIGIAQIALKEL------------EPGKVKDVWLKLVKD 372 (570)
Q Consensus 335 ~d~d~~~~~d~~lG~~~i~l~~l------------~~~~~~~~w~~L~~~ 372 (570)
||++.. ++|++||++.+++..+ .++....+|++|.+.
T Consensus 100 ~d~d~~-~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 100 LDYDKI-GKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp EECCSS-SCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred EECCCC-CCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 999998 8999999999999853 234567889998654
No 64
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2e-18 Score=152.83 Aligned_cols=108 Identities=27% Similarity=0.466 Sum_probs=93.9
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC-----------ceEEeeeeCCCCCCeeecEEEEE-Ee--cCCCC
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD-----------RMKTSKTINNELNPIWNEHFEFT-VE--DASTQ 328 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~-----------~~~~T~~~~~t~nP~Wne~f~f~-v~--~~~~~ 328 (570)
.|.|.|+|++|++|+..+..|.+||||++++.+..+ ..++|+++++++||+|||+|.|. +. +....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 689999999999999999889999999999985432 25789999999999999999997 53 22457
Q ss_pred eEEEEEEeCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeec
Q 008305 329 HLTVRVFDDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVK 371 (570)
Q Consensus 329 ~L~~~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 371 (570)
.|.|+|||++.. ++|++||++.+++.++..+...+.|++|.+
T Consensus 97 ~l~i~V~d~d~~-~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRF-SSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSS-SCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCC-CCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 899999999998 889999999999999987666789999964
No 65
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.72 E-value=1.7e-16 Score=144.19 Aligned_cols=107 Identities=27% Similarity=0.445 Sum_probs=89.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC---CceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA---GNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHD 517 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~---~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~ 517 (570)
.+.|.|+|++|+||+..+..|.+||||++++... ..+++|++++++.||+|||+|.|.+... ....|.|+|||++
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 5899999999999999998999999999999742 3688999999999999999999998643 3568999999999
Q ss_pred CCCC-ceeEEEEEeccccc------------cCceEEEEEEecCC
Q 008305 518 TFGK-DKMGKCIMTLTRVM------------MEGEIQDSFHIDGT 549 (570)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l~------------~~~~~~~w~~L~~~ 549 (570)
..++ ++||++.+++.++. .+....+|+.|.+.
T Consensus 116 ~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~~ 160 (166)
T 2cm5_A 116 IGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNE 160 (166)
T ss_dssp SSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC-
T ss_pred CCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCCc
Confidence 8876 69999999999853 22345677777643
No 66
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.72 E-value=9.4e-17 Score=143.90 Aligned_cols=91 Identities=29% Similarity=0.442 Sum_probs=74.7
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCc---eEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGN---RAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHD 517 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~---~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~ 517 (570)
.+.|.|+|++|+||+..+..|.+||||++++..... ++||++++++.||.|||+|.|.+... ....|.|+|||++
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 589999999999999999889999999999954322 67999999999999999999998654 2468999999999
Q ss_pred CCCC-ceeEEEEEeccc
Q 008305 518 TFGK-DKMGKCIMTLTR 533 (570)
Q Consensus 518 ~~~~-d~lG~~~i~l~~ 533 (570)
..++ ++||++.+++.+
T Consensus 109 ~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 RGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TTSCCEEEEEEEESTTC
T ss_pred CCCCCcEEEEEEECCCC
Confidence 8865 699999999988
No 67
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=5.2e-17 Score=142.87 Aligned_cols=97 Identities=25% Similarity=0.437 Sum_probs=85.2
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC--ceEEeeeeCCCCCCeeecEEEEEEecCC--CCeEEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD--RMKTSKTINNELNPIWNEHFEFTVEDAS--TQHLTVRVF 335 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~--~~~~T~~~~~t~nP~Wne~f~f~v~~~~--~~~L~~~v~ 335 (570)
....|.|.|+|++|++|+..+..|.+||||++++.+.+. ..++|++++++.||+|||+|.|.+.... ...|.|+||
T Consensus 12 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~ 91 (138)
T 3n5a_A 12 NPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVM 91 (138)
T ss_dssp ETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEE
T ss_pred cCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEE
Confidence 356789999999999999999889999999999985432 3688999999999999999999986443 357999999
Q ss_pred eCCCCCCCCceEEEEEEEcccc
Q 008305 336 DDEGPMLAPEIIGIAQIALKEL 357 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l 357 (570)
|++.. ++|++||++.+++.++
T Consensus 92 d~~~~-~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 92 DKDKL-SRNDVIGKIYLSWKSG 112 (138)
T ss_dssp ECCSS-SCCEEEEEEEESSSSC
T ss_pred ECCCC-CCCcEEEEEEEccccC
Confidence 99998 8999999999999975
No 68
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.70 E-value=1.3e-16 Score=145.10 Aligned_cols=97 Identities=25% Similarity=0.419 Sum_probs=85.8
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--CceEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--DRMKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVF 335 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~ 335 (570)
....|.|.|+|++|++|+..+..|.+||||++++.+.. ...++|+++++++||+|||+|.|.+... ....|.|+||
T Consensus 33 ~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 112 (166)
T 2cm5_A 33 STQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVW 112 (166)
T ss_dssp ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEE
T ss_pred ECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEE
Confidence 45789999999999999999988999999999998532 3578999999999999999999998643 3468999999
Q ss_pred eCCCCCCCCceEEEEEEEcccc
Q 008305 336 DDEGPMLAPEIIGIAQIALKEL 357 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l 357 (570)
|++.. ++|++||++.+++.++
T Consensus 113 d~d~~-~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 113 DYDIG-KSNDYIGGCQLGISAK 133 (166)
T ss_dssp ECCSS-SCCEEEEEEEEETTCC
T ss_pred ECCCC-CCCcEEEeEEEecccC
Confidence 99998 8899999999999985
No 69
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.69 E-value=1.4e-16 Score=142.69 Aligned_cols=96 Identities=26% Similarity=0.372 Sum_probs=79.4
Q ss_pred cCCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCc--eEEeeeeCCCCCCeeecEEEEEEecCC--CCeEEEEEE
Q 008305 260 LKPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDR--MKTSKTINNELNPIWNEHFEFTVEDAS--TQHLTVRVF 335 (570)
Q Consensus 260 ~~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~--~~~T~~~~~t~nP~Wne~f~f~v~~~~--~~~L~~~v~ 335 (570)
....|.|.|+|++|++|+..+..|.+||||++++.+.+.. +++|+++++++||+|||+|.|.+.... ...|.|+||
T Consensus 26 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~ 105 (153)
T 1w15_A 26 QSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVL 105 (153)
T ss_dssp ETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEE
T ss_pred cCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEE
Confidence 3568999999999999999998899999999999864332 679999999999999999999987543 367999999
Q ss_pred eCCCCCCCCceEEEEEEEccc
Q 008305 336 DDEGPMLAPEIIGIAQIALKE 356 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~ 356 (570)
|++.. ++|++||++.+++.+
T Consensus 106 d~d~~-~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 106 DSERG-SRNEVIGRLVLGATA 125 (153)
T ss_dssp ECCTT-SCCEEEEEEEESTTC
T ss_pred eCCCC-CCCcEEEEEEECCCC
Confidence 99998 899999999999988
No 70
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.67 E-value=4.7e-16 Score=135.09 Aligned_cols=118 Identities=22% Similarity=0.309 Sum_probs=83.1
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeee-CCCCCCeeecEEEEEEecCCCCeEEEEEEeCCCC
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTI-NNELNPIWNEHFEFTVEDASTQHLTVRVFDDEGP 340 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~-~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~~ 340 (570)
+.|.|.|+|++|+++.. .|.+||||+++ . . ..+|+++ .++.||+|||+|.|.+.+. ...|.|+|||+| .
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~---~-~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V---Q-NVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E---T-TEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e---c-CEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-C
Confidence 56899999999998852 57899999999 3 2 2345544 4799999999999999864 457999999999 7
Q ss_pred CCCCceEEEEEEEccccCCCe--eeEEEEEeeccccccCCCcceeE-------EEEEEEE
Q 008305 341 MLAPEIIGIAQIALKELEPGK--VKDVWLKLVKDVKVQRDTKNRGQ-------VHLELLY 391 (570)
Q Consensus 341 ~~~d~~lG~~~i~l~~l~~~~--~~~~w~~L~~~~~~~~~~~~~G~-------l~l~l~~ 391 (570)
++|++||++.++|+++.... ....|.++.-... ...++..|+ +.+++.|
T Consensus 73 -~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~-~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 73 -IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAI-MADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp -SCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC-----------CCSCCCCCEEEEEEEE
T ss_pred -CCCCeEEEEEEEHHHhhhcCCCCccccEEcccccc-cCCCcCcceECCCccEEEEEEEe
Confidence 79999999999999986432 1124555532211 123334444 7777665
No 71
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.65 E-value=1.3e-15 Score=130.11 Aligned_cols=117 Identities=20% Similarity=0.323 Sum_probs=100.1
Q ss_pred EEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeC-CCCCCeeecEEEEEEecC--CCCeEEEEEEeCCCCC
Q 008305 265 TLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTIN-NELNPIWNEHFEFTVEDA--STQHLTVRVFDDEGPM 341 (570)
Q Consensus 265 ~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~-~t~nP~Wne~f~f~v~~~--~~~~L~~~v~d~d~~~ 341 (570)
.|+|+|.+|++|+ |++|||+++.+. +.+++|+++. ++.||+|||.|.|.+..+ .+..|.+.|+|++++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FR---g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v- 92 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFR---GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV- 92 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEET---TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT-
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEe---ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc-
Confidence 6899999999998 579999999995 7889999997 699999999999999643 356899999999999
Q ss_pred CCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEEec
Q 008305 342 LAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCPF 394 (570)
Q Consensus 342 ~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 394 (570)
+++++||++.++|+++........+..|.+. +.....++|.++++|.|.
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~----n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDD----NNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECT----TSCEEEEEEEEEEEEEET
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCC----CCCccccEEEEEEEecCC
Confidence 9999999999999999876666666666543 234556999999999985
No 72
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.64 E-value=8e-15 Score=155.90 Aligned_cols=164 Identities=20% Similarity=0.293 Sum_probs=124.1
Q ss_pred ceeEEEEEecccccc-CcchHHHHHHHHHHHHHhhccc-----c--ceeeEecCCCC------------CC-Cccc-CCc
Q 008305 206 DLDFTLKVVGGDISS-IPGISDAIEETIIDAIEDSITW-----P--VRQIIPILPGD------------YS-DLEL-KPC 263 (570)
Q Consensus 206 ~id~~l~~~g~~~~~-iP~l~~~i~~~i~~~i~~~~v~-----P--~~~~~~~~~~~------------~~-~~~~-~~~ 263 (570)
-|++.+.|+. ++.. -+--..-++.++.+-+.+.-.+ | |-. .+ ..|. .. -.+. ...
T Consensus 317 ~I~~~l~PI~-~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~-~~-l~g~~C~C~C~~~~~t~~~~C~~~~~~ 393 (540)
T 3nsj_A 317 LVDYSLEPLH-TLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQ-HK-SSHDSCQCECQDSKVTNQDCCPRQRGL 393 (540)
T ss_dssp EEEEEEEEGG-GGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTE-EE-CSSCTTCEEESCTTTBCGGGCBSSTTE
T ss_pred eEEEEEEEHH-HhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCC-cc-CCCCceEeeCCCCCCcccccccccCcc
Confidence 6888888874 4332 3445567888888888876555 4 322 22 2221 01 1111 358
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEec-CCCCeEEEEEEeCCCCCC
Q 008305 264 GTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVED-ASTQHLTVRVFDDEGPML 342 (570)
Q Consensus 264 G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~-~~~~~L~~~v~d~d~~~~ 342 (570)
|.|.|+|++|++|+. |..|++||||+++++ ++.++|+++++++||+|||+|.|.+.+ ...+.|.|+|||+|.. +
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~---~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~-~ 468 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFG---GQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYG-W 468 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEET---TEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSS-S
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEEC---CEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCC-C
Confidence 999999999999998 988999999999997 567999999999999999999998653 4567899999999998 8
Q ss_pred CCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 343 APEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 343 ~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
.||+||++.++|. .+ ..+.|++| ..|.|+++++..
T Consensus 469 ~dD~LG~~~~~L~---~g-~~~~~~~l-----------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 469 DDDLLGSCDRSPH---SG-FHEVTCEL-----------NHGRVKFSYHAK 503 (540)
T ss_dssp CCEEEEEEEECCC---SE-EEEEEEEC-----------SSSEEEEEEEEE
T ss_pred CCCEEEEEEEEee---CC-cEEEEEEc-----------CCeEEEEEEEEE
Confidence 8999999999987 23 46788876 258888887653
No 73
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=7.1e-16 Score=166.06 Aligned_cols=120 Identities=25% Similarity=0.387 Sum_probs=105.0
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeCCCC
Q 008305 261 KPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVFDDEGP 340 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~~ 340 (570)
...|.|.|+|++|++|++.|..|.+||||+++++ .+.++|+++++|+||+|||+|.|.+.....+.|.|+|||+|..
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~---~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMG---SQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEEC---CeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4679999999999999999989999999999995 6789999999999999999999999877778899999999998
Q ss_pred CCCCceEEEEEEEccccCCCee----eEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 341 MLAPEIIGIAQIALKELEPGKV----KDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 341 ~~~d~~lG~~~i~l~~l~~~~~----~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
++|++||++.+++.++..+.. ...|+++. +...|+|++.+.+.
T Consensus 461 -~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~--------~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 -SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH--------EVPTGEVWVRFDLQ 507 (510)
T ss_dssp -SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB--------SSSSCEEEEEEEEE
T ss_pred -CCCCceEEEEEEHHHhccccCCCCceeeeecCC--------CCCCceEEEEEEEE
Confidence 899999999999999976433 66899883 34679998888764
No 74
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.64 E-value=1.4e-15 Score=151.68 Aligned_cols=121 Identities=29% Similarity=0.459 Sum_probs=99.7
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECCCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHDTF 519 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~~~ 519 (570)
.+.|.|+|++|+||+..+..|.+||||++++.. +..+++|++++++.||.|||+|.|.+... ....|.|+|||++.+
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~ 98 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRF 98 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSS
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCC
Confidence 589999999999999999999999999999842 34678999999999999999999998633 345899999999988
Q ss_pred CC-ceeEEEEEe-cccccc-CceEEEEEEecCC-----CCeEEEEEEEEEec
Q 008305 520 GK-DKMGKCIMT-LTRVMM-EGEIQDSFHIDGT-----KSGKLFLNLKWTPQ 563 (570)
Q Consensus 520 ~~-d~lG~~~i~-l~~l~~-~~~~~~w~~L~~~-----~~G~i~l~~~~~p~ 563 (570)
++ ++||++.++ +.++.. ......|++|... ..|+|.+.+.|.|.
T Consensus 99 ~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 99 SRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPT 150 (296)
T ss_dssp SCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETT
T ss_pred CCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccc
Confidence 65 799999996 555543 2345679999642 36999999999764
No 75
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.62 E-value=3.4e-15 Score=160.78 Aligned_cols=119 Identities=25% Similarity=0.497 Sum_probs=106.1
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECCCCC
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTFG 520 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~~ 520 (570)
...|.|.|+|++|+||+..+..|.+||||+++++ ..+++|+++++|.||.|||+|.|.+.......|.|+|||++..+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~--~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~ 461 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMG--SQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFS 461 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET--TEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEEC--CeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCC
Confidence 4568999999999999999999999999999994 47899999999999999999999998777788999999999987
Q ss_pred C-ceeEEEEEeccccccCce----EEEEEEecCCCCeEEEEEEEEE
Q 008305 521 K-DKMGKCIMTLTRVMMEGE----IQDSFHIDGTKSGKLFLNLKWT 561 (570)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~----~~~w~~L~~~~~G~i~l~~~~~ 561 (570)
+ |+||++.+++.++..+.. ...|++|.+..+|+|++++++.
T Consensus 462 ~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 462 PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 5 799999999999986543 6799999999999999988764
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.62 E-value=6.4e-15 Score=133.20 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=86.5
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeC-CCCCCeeecEEEEEEecCCCCeEEEEEEeCCCC
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTIN-NELNPIWNEHFEFTVEDASTQHLTVRVFDDEGP 340 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~-~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~~ 340 (570)
+.|.|.|+|++|+++. ..|.+||||+++ . +..+|+++. ++.||+|||+|.|.+.+.. ..|.|+|||+| .
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~-~~L~~~V~D~d-~ 81 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V----QNVESTTIAVRGSQPSWEQDFMFEINRLD-LGLTVEVWNKG-L 81 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE-E----TTEEEECCCEESSSCEEEEEEEEECCCTT-SEEEEEEEECC-S
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE-e----cceEEEEecCCCCCCCCCCEEEEEeeCCC-CEEEEEEEECC-C
Confidence 5789999999999884 257899999999 3 234566654 6999999999999998654 57999999999 7
Q ss_pred CCCCceEEEEEEEccccCCCe------eeEEEEEeeccccc--cCCCcceeEEEEEEEEE
Q 008305 341 MLAPEIIGIAQIALKELEPGK------VKDVWLKLVKDVKV--QRDTKNRGQVHLELLYC 392 (570)
Q Consensus 341 ~~~d~~lG~~~i~l~~l~~~~------~~~~w~~L~~~~~~--~~~~~~~G~l~l~l~~~ 392 (570)
++|++||++.++|+++.... -...|+.+....+. .......|.+++++++.
T Consensus 82 -~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 82 -IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp -SCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred -CCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 78999999999999986432 12234443311100 00112345677888775
No 77
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.59 E-value=2.1e-14 Score=122.58 Aligned_cols=114 Identities=18% Similarity=0.286 Sum_probs=98.7
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccC-CCCCCeeeeEEEEEeecC--CCcEEEEEEEECCCCC
Q 008305 444 GVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAH-DTLNPVWNQTFDFVVEDG--QHEMLILDVYDHDTFG 520 (570)
Q Consensus 444 g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~~~~ 520 (570)
-.|+|.|.+|.||+ |.+|||+++.+. ..++||+++. ++.||+|||.|+|++..+ ..+.|.|.|+|++..+
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FR--g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFR--GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEET--TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEe--ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 46999999999998 578999999994 4889999998 699999999999999644 5678999999999987
Q ss_pred C-ceeEEEEEeccccccCceEEEEEEecCCC----CeEEEEEEEEEecC
Q 008305 521 K-DKMGKCIMTLTRVMMEGEIQDSFHIDGTK----SGKLFLNLKWTPQL 564 (570)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~----~G~i~l~~~~~p~~ 564 (570)
+ ++||++.++|.++...+...-+-+|.+.+ .+.|.++++|.|.+
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred CCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 7 59999999999999888877677775432 48999999999965
No 78
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.57 E-value=3.4e-15 Score=163.51 Aligned_cols=111 Identities=26% Similarity=0.536 Sum_probs=100.6
Q ss_pred ccCCceEEEEEEEEecCCCC---CCCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecCCCCeEEEEEE
Q 008305 259 ELKPCGTLDVKLVQAKELTN---KDLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDASTQHLTVRVF 335 (570)
Q Consensus 259 ~~~~~G~L~V~V~~A~~L~~---~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~ 335 (570)
+..+.|.|+|+|++|++|+. .|..|.+||||++++.+...++++|+++++++||+|||+|.|.+.....+.|.|+||
T Consensus 13 e~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~ 92 (749)
T 1cjy_A 13 EHQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 92 (749)
T ss_dssp CCCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEE
T ss_pred cCCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEE
Confidence 34689999999999999998 787899999999999865457899999999999999999999998777789999999
Q ss_pred eCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeec
Q 008305 336 DDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVK 371 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 371 (570)
|+|.. + |++||++.+++.++..+...+.|++|.+
T Consensus 93 D~D~~-~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 93 DANYV-M-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp ECCSS-S-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred ECCCC-C-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 99999 7 9999999999999988887899999954
No 79
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.56 E-value=2.5e-14 Score=124.15 Aligned_cols=110 Identities=17% Similarity=0.270 Sum_probs=81.9
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccC-CCCCCeeeeEEEEEeecCCCcEEEEEEEECCCCC
Q 008305 442 VRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAH-DTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTFG 520 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~~ 520 (570)
..+.|.|+|++|++++. .|.+||||++. . ...+|++++ ++.||.|||+|.|.+.+ ....|.|+|||++ .+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~---~~~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d-~~ 73 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V---QNVKSTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG-LI 73 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E---TTEEEECCCEESSSCEEEEEEEEEECC-CSSEEEEEEEECC-SS
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e---cCEEEeEecCCCCCceECCEEEEEEeC-CCCeEEEEEEECC-CC
Confidence 36899999999998853 67899999999 3 233455554 69999999999999975 4567999999999 65
Q ss_pred C-ceeEEEEEeccccccCc--eEEEEEEec-------CCC-------CeEEEEEEEE
Q 008305 521 K-DKMGKCIMTLTRVMMEG--EIQDSFHID-------GTK-------SGKLFLNLKW 560 (570)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~--~~~~w~~L~-------~~~-------~G~i~l~~~~ 560 (570)
+ ++||++.++|+++.... ...+|.++. +.. .+++.+.++|
T Consensus 74 ~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 74 WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred CCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 5 79999999999987544 222455442 222 3457777776
No 80
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.53 E-value=8.5e-14 Score=151.43 Aligned_cols=124 Identities=19% Similarity=0.328 Sum_probs=103.1
Q ss_pred CceEEEEEEEEecCCCCCCC--CCCCCcEEEEEEEeC--CCceEEeeeeCCC-CCCeeecEEEEEEecCCCCeEEEEEEe
Q 008305 262 PCGTLDVKLVQAKELTNKDL--IGKSDPFVVIFVRPL--RDRMKTSKTINNE-LNPIWNEHFEFTVEDASTQHLTVRVFD 336 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~--~g~~dpyv~v~l~~~--~~~~~~T~~~~~t-~nP~Wne~f~f~v~~~~~~~L~~~v~d 336 (570)
..+.|.|+|++|++|+..+. .+.+||||++.+.+. ...+++|++++++ .||+|||+|.|.+..++...|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999998873 688999999999632 2357899999887 999999999999987766789999999
Q ss_pred CCCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 337 DEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 337 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
+|.. ++|++||++.++|..|..+. .|++|.... ...-..|.|.+.+.|.
T Consensus 575 ~D~~-~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~---g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSS-SKNDFIGQSTIPWNSLKQGY---RHVHLLSKN---GDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSS-SCCEEEEEEEEEGGGBCCEE---EEEEEECTT---SCEEEEEEEEEEEEEE
T ss_pred cCCC-CCCceeEEEEEEHHHcCCCc---EEEeCCCCC---cCCCCceEEEEEEEEE
Confidence 9998 89999999999999998753 589986532 1222468888888774
No 81
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.53 E-value=1.1e-13 Score=147.31 Aligned_cols=115 Identities=20% Similarity=0.235 Sum_probs=98.2
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCCCCCeeeeEEEEEeec-CCCcEEEEEEEECCCCC
Q 008305 442 VRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDTLNPVWNQTFDFVVED-GQHEMLILDVYDHDTFG 520 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~-~~~~~L~i~V~d~~~~~ 520 (570)
..+.|.|+|++|+||+. |..|.+||||++++++ .++||+++++++||+|||.|.|.+.+ .....|.|+|||+|..+
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~--~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~ 468 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG--QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGW 468 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT--EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSS
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC--EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCC
Confidence 36899999999999998 8899999999999963 67999999999999999999998643 35778999999999986
Q ss_pred C-ceeEEEEEeccccccCceEEEEEEecCCCCeEEEEEEEEEecCCC
Q 008305 521 K-DKMGKCIMTLTRVMMEGEIQDSFHIDGTKSGKLFLNLKWTPQLVL 566 (570)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~~~~~p~~~~ 566 (570)
+ |+||++.++|.. +....|++|+ .|.|+++++..-.+.+
T Consensus 469 ~dD~LG~~~~~L~~----g~~~~~~~l~---~G~l~~~~~~~c~p~l 508 (540)
T 3nsj_A 469 DDDLLGSCDRSPHS----GFHEVTCELN---HGRVKFSYHAKCLPHL 508 (540)
T ss_dssp CCEEEEEEEECCCS----EEEEEEEECS---SSEEEEEEEEEECTTE
T ss_pred CCCEEEEEEEEeeC----CcEEEEEEcC---CeEEEEEEEEEECCCC
Confidence 6 799999999973 4567888876 4899998887665544
No 82
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.48 E-value=3.3e-13 Score=121.94 Aligned_cols=114 Identities=16% Similarity=0.230 Sum_probs=85.1
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccC-CCCCCeeeeEEEEEeecCCCcEEEEEEEECCCCCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAH-DTLNPVWNQTFDFVVEDGQHEMLILDVYDHDTFGK 521 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~~~~ 521 (570)
.+.|.|+|++|++++ ..|.+||||++. . +..||++++ ++.||.|||+|.|.+.+ ....|.|+|||++...+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~---~~~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d~~~d 84 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK-V---QNVESTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKGLIWD 84 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE-E---TTEEEECCCEESSSCEEEEEEEEECCC-TTSEEEEEEEECCSSCC
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE-e---cceEEEEecCCCCCCCCCCEEEEEeeC-CCCEEEEEEEECCCCCC
Confidence 579999999999885 368899999999 3 234566665 68999999999999975 45679999999993344
Q ss_pred ceeEEEEEeccccccCc-----e-EEEEEEec---CCC-------CeEEEEEEEEEecC
Q 008305 522 DKMGKCIMTLTRVMMEG-----E-IQDSFHID---GTK-------SGKLFLNLKWTPQL 564 (570)
Q Consensus 522 d~lG~~~i~l~~l~~~~-----~-~~~w~~L~---~~~-------~G~i~l~~~~~p~~ 564 (570)
|+||++.++|.++.... . ...|+.+. +.. .|+++++++|....
T Consensus 85 d~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~~ 143 (167)
T 2cjs_A 85 TMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELPL 143 (167)
T ss_dssp EEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCC
T ss_pred ceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecCC
Confidence 79999999999987544 1 13445432 221 35578888886544
No 83
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.48 E-value=8.2e-14 Score=152.62 Aligned_cols=114 Identities=23% Similarity=0.492 Sum_probs=99.7
Q ss_pred ccceEEEEEEEEeecCCC---CCCCCCCCcEEEEEEeCC-CceEeCcccCCCCCCeeeeEEEEEeecCCCcEEEEEEEEC
Q 008305 441 IVRGVLSITVIAAENLPK---VDLIGKADPFVVLQLKKA-GNRAKTRVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDH 516 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~---~~~~g~~dpyv~v~~~~~-~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~ 516 (570)
...+.|+|+|++|++|+. .+..|.+||||++++.+. ..++||++++++.||+|||+|.|.+.......|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 346899999999999998 777889999999999642 3678999999999999999999999876677899999999
Q ss_pred CCCCCceeEEEEEeccccccCceEEEEEEecCCCCeEEEE
Q 008305 517 DTFGKDKMGKCIMTLTRVMMEGEIQDSFHIDGTKSGKLFL 556 (570)
Q Consensus 517 ~~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l 556 (570)
+..++++||++.++|.++..+....+|++|.+. +++.+
T Consensus 95 D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 95 NYVMDETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CSSSCEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CCCCCceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 998866999999999999877777899999875 45544
No 84
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.47 E-value=6e-13 Score=144.78 Aligned_cols=118 Identities=23% Similarity=0.387 Sum_probs=99.1
Q ss_pred ccceEEEEEEEEeecCCCCCC--CCCCCcEEEEEEeC---CCceEeCcccCCC-CCCeeeeEEEEEeecCCCcEEEEEEE
Q 008305 441 IVRGVLSITVIAAENLPKVDL--IGKADPFVVLQLKK---AGNRAKTRVAHDT-LNPVWNQTFDFVVEDGQHEMLILDVY 514 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~--~g~~dpyv~v~~~~---~~~~~kT~v~~~t-~nP~w~e~f~f~v~~~~~~~L~i~V~ 514 (570)
...+.|+|+|++|++|+..+. .+.+||||+|.+.+ ...++||++++++ .||+|||+|.|.+..+....|.|+||
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred ccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 357899999999999998873 68899999999964 2357899999997 99999999999998766678999999
Q ss_pred ECCCCCC-ceeEEEEEeccccccCceEEEEEEecCCC-----CeEEEEEEEEE
Q 008305 515 DHDTFGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGTK-----SGKLFLNLKWT 561 (570)
Q Consensus 515 d~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 561 (570)
|++..++ ++||++.++|.++..+ .+|++|.+.. .+.|.+++++.
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EcCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9998865 7999999999998653 3688996542 47788888775
No 85
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.43 E-value=1.1e-14 Score=154.49 Aligned_cols=125 Identities=16% Similarity=0.297 Sum_probs=22.6
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCceEEeeeeCCC---CCCeeecEEEEEEecCCCCeEEEEEEeC
Q 008305 261 KPCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDRMKTSKTINNE---LNPIWNEHFEFTVEDASTQHLTVRVFDD 337 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t---~nP~Wne~f~f~v~~~~~~~L~~~v~d~ 337 (570)
+..|.|+|+|++|++|+++| ||||+++++. .+..||+++++| +||+|||+|.|.+... .+.|.++|||.
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~--~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDD--MLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRD 79 (483)
T ss_dssp EEEECC----------------------------------------------------CCEECC----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECC--eEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEec
Confidence 46789999999999998876 9999999972 345789999999 9999999999987543 47899999994
Q ss_pred -C---CCCCCCceEEEEEEEccccCCCeeeEEEEEeecccccc-------------------CCCcceeEEEEEEEEEec
Q 008305 338 -E---GPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQ-------------------RDTKNRGQVHLELLYCPF 394 (570)
Q Consensus 338 -d---~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~-------------------~~~~~~G~l~l~l~~~p~ 394 (570)
| .. ++|++||++.++++++..+...+.|++|....... +.....|.|++++.|.+.
T Consensus 80 ~d~~~~~-~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 80 SDKKRKK-DKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ----------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred CCccccC-CCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 4 35 68999999999999999887889999996543210 112356999999999864
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.37 E-value=5.2e-14 Score=149.29 Aligned_cols=119 Identities=18% Similarity=0.224 Sum_probs=24.8
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCceEeCcccCCC---CCCeeeeEEEEEeecCCCcEEEEEEEEC-C
Q 008305 442 VRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGNRAKTRVAHDT---LNPVWNQTFDFVVEDGQHEMLILDVYDH-D 517 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~~kT~v~~~t---~nP~w~e~f~f~v~~~~~~~L~i~V~d~-~ 517 (570)
..+.|+|+|++|++|+.++ ||||++++++ ..+.||+++++| .||+|||+|+|.+... ...|.|+|||. +
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~-~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d 81 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDD-MLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSD 81 (483)
T ss_dssp EEECC---------------------------------------------------CCEECC------------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECC-eEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCC
Confidence 4688999999999999876 9999999964 446799999999 9999999999987533 57899999994 4
Q ss_pred C---C-CCceeEEEEEeccccccCceEEEEEEecCC---------------------------CCeEEEEEEEEEecCCC
Q 008305 518 T---F-GKDKMGKCIMTLTRVMMEGEIQDSFHIDGT---------------------------KSGKLFLNLKWTPQLVL 566 (570)
Q Consensus 518 ~---~-~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~---------------------------~~G~i~l~~~~~p~~~~ 566 (570)
. . ++++||++.|+++++..+...++||+|.+. ..|.|+++++|.+..++
T Consensus 82 ~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~vl 161 (483)
T 3bxj_A 82 KKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSIL 161 (483)
T ss_dssp -------------------------CCEECC--------------------------------------CEEEEEECCBC
T ss_pred ccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeeeec
Confidence 2 3 347999999999999877778899999431 25899999999988765
Q ss_pred C
Q 008305 567 R 567 (570)
Q Consensus 567 ~ 567 (570)
.
T Consensus 162 P 162 (483)
T 3bxj_A 162 P 162 (483)
T ss_dssp C
T ss_pred c
Confidence 3
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.26 E-value=7.6e-12 Score=138.76 Aligned_cols=108 Identities=31% Similarity=0.517 Sum_probs=94.5
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--CceEEeeeeCCCCCCeeecEEEEEEecCC-CCeEEEEEEeCCC
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--DRMKTSKTINNELNPIWNEHFEFTVEDAS-TQHLTVRVFDDEG 339 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~Wne~f~f~v~~~~-~~~L~~~v~d~d~ 339 (570)
.+.|.|+|++|++|.+.|..|.+||||++++.+.+ ..+++|+++++++||.|||+|.|.+.... ...|.++|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 57899999999999999999999999999997543 35789999999999999999999986543 3469999999999
Q ss_pred CCCCCceEEEEEEEccccCCCeeeEEEEEeecc
Q 008305 340 PMLAPEIIGIAQIALKELEPGKVKDVWLKLVKD 372 (570)
Q Consensus 340 ~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 372 (570)
. ++|++||++.+++.++.... .+.|+.+...
T Consensus 251 ~-~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 251 T-SRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp S-SCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred c-cccccccccccchhhhccCC-cccceeeccc
Confidence 9 99999999999999997655 5889999754
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.21 E-value=6.6e-11 Score=131.20 Aligned_cols=106 Identities=30% Similarity=0.546 Sum_probs=91.4
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeC---CCceEeCcccCCCCCCeeeeEEEEEeecC-CCcEEEEEEEECCC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKK---AGNRAKTRVAHDTLNPVWNQTFDFVVEDG-QHEMLILDVYDHDT 518 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~w~e~f~f~v~~~-~~~~L~i~V~d~~~ 518 (570)
.+.|.|++.+|++|+..+..|.+||||++.+.. ...+++|++++++.||.|||+|.|.+... ....|.|+|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 478999999999999999999999999999842 33578999999999999999999998643 34569999999998
Q ss_pred CCC-ceeEEEEEeccccccCceEEEEEEecCC
Q 008305 519 FGK-DKMGKCIMTLTRVMMEGEIQDSFHIDGT 549 (570)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (570)
.++ |+||++.+++.++.... ..+|+.|.+.
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred ccccccccccccchhhhccCC-cccceeeccc
Confidence 876 69999999999997654 4899998544
No 89
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.13 E-value=4.2e-10 Score=125.34 Aligned_cols=115 Identities=21% Similarity=0.318 Sum_probs=89.6
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC---CceEEee-eeC-CCCCCeeec-EEEE-EEecCCCCeEEEEE
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR---DRMKTSK-TIN-NELNPIWNE-HFEF-TVEDASTQHLTVRV 334 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~---~~~~~T~-~~~-~t~nP~Wne-~f~f-~v~~~~~~~L~~~v 334 (570)
..|.|.|+|++|++|+. +.+||||++.+.+.+ .++++|+ +++ ++.||+||| +|.| .+..++...|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46899999999999985 468999999996322 2357899 775 569999999 7999 78766666899999
Q ss_pred EeCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEE
Q 008305 335 FDDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLY 391 (570)
Q Consensus 335 ~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~ 391 (570)
||++ +++||++.+||..|..| -.|++|.... ...-..+.|.+.+.+
T Consensus 752 ~D~d-----~d~iG~~~ipl~~L~~G---~r~v~L~~~~---g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG-----NKFLGHRIIPINALNSG---YHHLCLHSES---NMPLTMPALFIFLEM 797 (799)
T ss_dssp EETT-----TEEEEEEEEEGGGBCCE---EEEEEEECTT---CCEEEEEEEEEEEEE
T ss_pred EEeC-----CCccceEeeehhhcCCC---cEEEeccCCC---CCCCCceEEEEEEEE
Confidence 9975 68999999999999875 3578886432 122245778887766
No 90
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.12 E-value=3.9e-10 Score=125.62 Aligned_cols=117 Identities=18% Similarity=0.349 Sum_probs=91.6
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC--C-ceEEeeeeCC-CCCCeeec-EEEEE-EecCCCCeEEEEEEe
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR--D-RMKTSKTINN-ELNPIWNE-HFEFT-VEDASTQHLTVRVFD 336 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~--~-~~~~T~~~~~-t~nP~Wne-~f~f~-v~~~~~~~L~~~v~d 336 (570)
...|.|+|++|++|+.. .+||||+|.+.+.+ . .+++|+++.+ +.||+||| +|.|. +..++...|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 34899999999999853 58999999998422 1 2478999865 69999999 69998 766666689999999
Q ss_pred CCCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEEec
Q 008305 337 DEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCPF 394 (570)
Q Consensus 337 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 394 (570)
+| +++||++.+||..|..|- .+++|.+.. ...-..|.|.+.+.+..+
T Consensus 800 ~d-----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~---g~~l~~atLfv~i~~~~~ 846 (885)
T 3ohm_B 800 EG-----GKFVGHRILPVSAIRSGY---HYVCLRNEA---NQPLCLPALLIYTEASDY 846 (885)
T ss_dssp TT-----TEEEEEEEEETTTCCCEE---EEEEEECTT---SCEEEEEEEEEEEEEEEC
T ss_pred CC-----ccEEeeEEEEHHHcCCCc---eEEEecCCC---CCccCceEEEEEEEEEec
Confidence 75 689999999999998763 457776432 122357899999998754
No 91
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.12 E-value=5e-10 Score=124.05 Aligned_cols=117 Identities=21% Similarity=0.373 Sum_probs=91.5
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC----ceEEeeeeCC-CCCCeeecE-EEEE-EecCCCCeEEEEEE
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD----RMKTSKTINN-ELNPIWNEH-FEFT-VEDASTQHLTVRVF 335 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~----~~~~T~~~~~-t~nP~Wne~-f~f~-v~~~~~~~L~~~v~ 335 (570)
.+.|.|+|++|++|+.. .+||||++.+.+.+. ++++|+++.+ +.||+|||+ |.|. +..++...|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999753 589999999984221 4678998875 699999998 9998 76666678999999
Q ss_pred eCCCCCCCCceEEEEEEEccccCCCeeeEEEEEeeccccccCCCcceeEEEEEEEEEec
Q 008305 336 DDEGPMLAPEIIGIAQIALKELEPGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYCPF 394 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 394 (570)
|++ +++||++.+||+.|..|- .+++|.+.. ...-..+.|.+.+.+.-.
T Consensus 725 D~d-----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~---g~~~~~atLfv~i~~~~~ 772 (816)
T 3qr0_A 725 EEN-----GKFIGHRVMPLDGIKPGY---RHVPLRNES---NRPLGLASVFAHIVAKDY 772 (816)
T ss_dssp ETT-----SCEEEEEEEESTTCCCEE---EEEEEECTT---SCEEEEEEEEEEEEEEEC
T ss_pred ecC-----CCeeeEEEEEHHHcCCcc---eEEEEeCCC---CCCCCceEEEEEEEEEec
Confidence 974 689999999999998763 467886532 122345788888887643
No 92
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.08 E-value=8e-10 Score=123.14 Aligned_cols=111 Identities=23% Similarity=0.370 Sum_probs=88.0
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC----CceEeCc-ccCC-CCCCeeee-EEEE-EeecCCCcEEEEE
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA----GNRAKTR-VAHD-TLNPVWNQ-TFDF-VVEDGQHEMLILD 512 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~----~~~~kT~-v~~~-t~nP~w~e-~f~f-~v~~~~~~~L~i~ 512 (570)
...+.|.|+|++|++|+. +.+||||+|.+.+. ..++||+ ++++ +.||+||| +|.| .+..+....|.|+
T Consensus 675 ~~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~ 750 (799)
T 2zkm_X 675 VVATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVA 750 (799)
T ss_dssp TTCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEE
T ss_pred eeeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEE
Confidence 357899999999999985 46899999999541 1367999 8765 69999999 7999 8876666789999
Q ss_pred EEECCCCCCceeEEEEEeccccccCceEEEEEEecCCC-----CeEEEEEEEEE
Q 008305 513 VYDHDTFGKDKMGKCIMTLTRVMMEGEIQDSFHIDGTK-----SGKLFLNLKWT 561 (570)
Q Consensus 513 V~d~~~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 561 (570)
|||++ +++||++.++++.+..+ .++++|.+.. .+.|.+.++++
T Consensus 751 V~D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 751 VMEEG---NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEETT---TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEeC---CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 99986 68999999999998643 4578885532 36677777664
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.06 E-value=9.1e-10 Score=122.66 Aligned_cols=110 Identities=18% Similarity=0.324 Sum_probs=88.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC--C--ceEeCcccCC-CCCCeeee-EEEEE-eecCCCcEEEEEEEE
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA--G--NRAKTRVAHD-TLNPVWNQ-TFDFV-VEDGQHEMLILDVYD 515 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~--~--~~~kT~v~~~-t~nP~w~e-~f~f~-v~~~~~~~L~i~V~d 515 (570)
...|.|+|++|++|+.. .+||||+|.+.+. . .++||+++++ +.||+||| +|.|. +..+....|.|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 45899999999999853 5899999999741 1 3579999986 59999999 69998 766666789999999
Q ss_pred CCCCCCceeEEEEEeccccccCceEEEEEEecCCC-----CeEEEEEEEEEe
Q 008305 516 HDTFGKDKMGKCIMTLTRVMMEGEIQDSFHIDGTK-----SGKLFLNLKWTP 562 (570)
Q Consensus 516 ~~~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~p 562 (570)
++ +|+||++.++|..+..+ .++++|.+.. .|.|.+.+.+..
T Consensus 800 ~d---ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 800 EG---GKFVGHRILPVSAIRSG---YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp TT---TEEEEEEEEETTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CC---ccEEeeEEEEHHHcCCC---ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 87 68999999999998643 3467885542 578888888874
No 94
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.03 E-value=1.5e-09 Score=120.17 Aligned_cols=110 Identities=16% Similarity=0.302 Sum_probs=88.4
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCC---C--ceEeCcccCC-CCCCeeeeE-EEEE-eecCCCcEEEEEE
Q 008305 442 VRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKA---G--NRAKTRVAHD-TLNPVWNQT-FDFV-VEDGQHEMLILDV 513 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~---~--~~~kT~v~~~-t~nP~w~e~-f~f~-v~~~~~~~L~i~V 513 (570)
..+.|+|+|++|++|+.. .+||||+|.+.+. . .++||+++++ +.||+|||+ |.|. +..+....|.|+|
T Consensus 648 ~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V 723 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIV 723 (816)
T ss_dssp CCEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred cceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEE
Confidence 357899999999999853 5899999999641 1 4679999886 599999998 9998 7666667899999
Q ss_pred EECCCCCCceeEEEEEeccccccCceEEEEEEecCCC-----CeEEEEEEEEE
Q 008305 514 YDHDTFGKDKMGKCIMTLTRVMMEGEIQDSFHIDGTK-----SGKLFLNLKWT 561 (570)
Q Consensus 514 ~d~~~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 561 (570)
||++ +|+||++.++|+.+..+ .++++|.+.. .+.|.+.+..+
T Consensus 724 ~D~d---ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 724 SEEN---GKFIGHRVMPLDGIKPG---YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp EETT---SCEEEEEEEESTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EecC---CCeeeEEEEEHHHcCCc---ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 9985 58999999999998653 3467886543 36777777765
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.02 E-value=4.9e-09 Score=86.74 Aligned_cols=113 Identities=12% Similarity=0.243 Sum_probs=84.5
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCC-CceEEe-eeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeCCCC
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLR-DRMKTS-KTINNELNPIWNEHFEFTVEDASTQHLTVRVFDDEGP 340 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~-~~~~~T-~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d~~ 340 (570)
.+.|+|.+.++.--.-.......||||.+.+.... ....+| ..+++|..|+|||+|.-.+++ .+.|.+.|++..
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a-- 80 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA-- 80 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEET--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCC--
Confidence 45788888666532212222468999999997311 012244 667889999999999988875 568999999643
Q ss_pred CCCCceEEEEEEEccccC-----CCeeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 341 MLAPEIIGIAQIALKELE-----PGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 341 ~~~d~~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
.+++..|++++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 81 ---~~fvAn~tV~~edL~~~c~~~~g~~e~WvdL----------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 81 ---EEPVSEVTVGVSVLAERCKKNNGKAEFWLDL----------QPQAKVLMSVQYF 124 (126)
T ss_dssp ---TEEEEEEEEEHHHHHHHHHTTTTEEEEEEEC----------BSSCEEEEEEEEE
T ss_pred ---CCeeeEEEEEHHHHHhhhccCCCceEEEEec----------ccCcEEEEEEEEe
Confidence 389999999999997 45567999998 4689999999986
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.01 E-value=7.5e-09 Score=85.64 Aligned_cols=113 Identities=16% Similarity=0.262 Sum_probs=86.7
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC--ceEeC-cccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECCC
Q 008305 442 VRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG--NRAKT-RVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHDT 518 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~--~~~kT-~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~~ 518 (570)
....|+|...++.--+........||||.+.+.... ...+| .++++|..|.||++|.-.+.+ ...|.|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC
Confidence 357788888777643322333468999999985311 12254 667889999999999999875 5689999997554
Q ss_pred CCCceeEEEEEecccccc-----CceEEEEEEecCCCCeEEEEEEEEE
Q 008305 519 FGKDKMGKCIMTLTRVMM-----EGEIQDSFHIDGTKSGKLFLNLKWT 561 (570)
Q Consensus 519 ~~~d~lG~~~i~l~~l~~-----~~~~~~w~~L~~~~~G~i~l~~~~~ 561 (570)
++++.++|++++|.. ++..+-|++|+. +|+|++.++|.
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 899999999999993 356789999998 79999999885
No 97
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.92 E-value=6.4e-09 Score=87.16 Aligned_cols=114 Identities=15% Similarity=0.303 Sum_probs=85.1
Q ss_pred CceEEEEEEEEecCCCCCC-CCCCCCcEEEEEEEeCCC-ceEEe-eeeCCCCCCeeecEEEEEEecCCCCeEEEEEEeCC
Q 008305 262 PCGTLDVKLVQAKELTNKD-LIGKSDPFVVIFVRPLRD-RMKTS-KTINNELNPIWNEHFEFTVEDASTQHLTVRVFDDE 338 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~-~~g~~dpyv~v~l~~~~~-~~~~T-~~~~~t~nP~Wne~f~f~v~~~~~~~L~~~v~d~d 338 (570)
..+.|+|.+.++.--+-.. .....||||.+.+..... ...+| ..++.|..|+|||+|.-.+++ .+.|.+.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 4567888887765433221 123589999999973110 12455 556778999999999888775 568999999532
Q ss_pred CCCCCCceEEEEEEEccccC-----CCeeeEEEEEeeccccccCCCcceeEEEEEEEEE
Q 008305 339 GPMLAPEIIGIAQIALKELE-----PGKVKDVWLKLVKDVKVQRDTKNRGQVHLELLYC 392 (570)
Q Consensus 339 ~~~~~d~~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~l~~~ 392 (570)
.+++..|++++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 86 -----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdL----------eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 -----VDLISETTVELYSLAERCRKNNGKTEIWLEL----------KPQGRMLMNARYF 129 (138)
T ss_dssp -----CSCCEEEEEESHHHHHHHHHTTTCEEEEEEC----------BSSCEEEEEEEEC
T ss_pred -----CCeeeEEEEEHHHHHhhhccCCCceEEEEec----------ccCcEEEEEEEEE
Confidence 389999999999997 44567999999 4689999999996
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.91 E-value=9.8e-09 Score=86.06 Aligned_cols=113 Identities=14% Similarity=0.274 Sum_probs=87.2
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEeCC--CceEeC-cccCCCCCCeeeeEEEEEeecCCCcEEEEEEEECC
Q 008305 442 VRGVLSITVIAAENLPKVD-LIGKADPFVVLQLKKA--GNRAKT-RVAHDTLNPVWNQTFDFVVEDGQHEMLILDVYDHD 517 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~-~~g~~dpyv~v~~~~~--~~~~kT-~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~V~d~~ 517 (570)
..+.|+|.+.+..--+... .....||||.|.+... ....+| .++++|..|.||+.|.-.+.+ ...|.|.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 3577888887776544332 1235899999998631 012566 666789999999999998875 568999999654
Q ss_pred CCCCceeEEEEEecccccc-----CceEEEEEEecCCCCeEEEEEEEEE
Q 008305 518 TFGKDKMGKCIMTLTRVMM-----EGEIQDSFHIDGTKSGKLFLNLKWT 561 (570)
Q Consensus 518 ~~~~d~lG~~~i~l~~l~~-----~~~~~~w~~L~~~~~G~i~l~~~~~ 561 (570)
. +++..++|++++|.. ++..+-|++|+. +|+|++.++|.
T Consensus 86 ~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 V---DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYF 129 (138)
T ss_dssp C---SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEEC
T ss_pred C---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEE
Confidence 3 899999999999993 346789999998 79999999995
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.56 E-value=1.8 Score=39.55 Aligned_cols=55 Identities=16% Similarity=0.190 Sum_probs=38.9
Q ss_pred eEEeeeeCCCCCCeeecEEEEEEecC--CCCeEEEEEEeCCCCCC---CCceEEEEEEEc
Q 008305 300 MKTSKTINNELNPIWNEHFEFTVEDA--STQHLTVRVFDDEGPML---APEIIGIAQIAL 354 (570)
Q Consensus 300 ~~~T~~~~~t~nP~Wne~f~f~v~~~--~~~~L~~~v~d~d~~~~---~d~~lG~~~i~l 354 (570)
.++|.+...+.+|.|+|++.+.+... ....|.|++++...... ....+|.+.+||
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL 137 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKL 137 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEES
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEc
Confidence 57888889999999999999888543 44679999998654311 123556655554
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=92.24 E-value=1 Score=38.87 Aligned_cols=125 Identities=14% Similarity=0.133 Sum_probs=86.7
Q ss_pred CCceEEEEEEEEecCCCCC-CCCCCCCcEEEEEEEeCCCceEEeeeeCCCCCCeeecEEEEEEecC-------CCCeEEE
Q 008305 261 KPCGTLDVKLVQAKELTNK-DLIGKSDPFVVIFVRPLRDRMKTSKTINNELNPIWNEHFEFTVEDA-------STQHLTV 332 (570)
Q Consensus 261 ~~~G~L~V~V~~A~~L~~~-~~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~Wne~f~f~v~~~-------~~~~L~~ 332 (570)
+-.+.+.|+|.++.-=+.. ...+..+|+.-+.+.-..-+.+.|.+.. +.+|.+|-+-.|.|... .+..+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 4578999999988632111 0123467887777775556677888776 78999999888888421 2346889
Q ss_pred EEEeCCCCCCCCceEEEEEEEccccCCCee-eEEEEEeeccccccCCC--cceeEEEEEEEEEe
Q 008305 333 RVFDDEGPMLAPEIIGIAQIALKELEPGKV-KDVWLKLVKDVKVQRDT--KNRGQVHLELLYCP 393 (570)
Q Consensus 333 ~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~-~~~w~~L~~~~~~~~~~--~~~G~l~l~l~~~p 393 (570)
+++..... .-..+|.+.|++.++..... .....+|... .+ ..-|.|.+.+++..
T Consensus 94 ELhqa~g~--~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~-----~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYST--EYETIAACQLKFHEILEKSGRIFCTASLIGT-----KGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECSS--CEEEEEEEEECCSHHHHCCSCEEEEEEECBS-----SSCCTTSEEEEEEEEEEE
T ss_pred EEEEeeCC--CceEEEEEEEEhHHhhCcCCceEEEEEEEcC-----CCCcceEEEEEEEEEEec
Confidence 99887653 56799999999999974322 3344566432 23 47899999998863
No 101
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=89.39 E-value=7.4 Score=35.53 Aligned_cols=56 Identities=13% Similarity=0.193 Sum_probs=43.0
Q ss_pred ceEeCcccCCCCCCeeeeEEEEEeecC--CCcEEEEEEEECCCCC----C-ceeEEEEEeccc
Q 008305 478 NRAKTRVAHDTLNPVWNQTFDFVVEDG--QHEMLILDVYDHDTFG----K-DKMGKCIMTLTR 533 (570)
Q Consensus 478 ~~~kT~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~V~d~~~~~----~-d~lG~~~i~l~~ 533 (570)
..++|.|.+.+.+|.|+|++.+.+... ....|.|+++...... . ..+|-+.++|-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 357888889999999999999988633 5578999998754321 1 378999999875
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=86.70 E-value=3.9 Score=35.19 Aligned_cols=119 Identities=14% Similarity=0.203 Sum_probs=78.7
Q ss_pred cceEEEEEEEEeecCCCCC--CCCCCCcEEEEEEeC-CCceEeCcccCCCCCCeeeeEEEEEeecC-------CCcEEEE
Q 008305 442 VRGVLSITVIAAENLPKVD--LIGKADPFVVLQLKK-AGNRAKTRVAHDTLNPVWNQTFDFVVEDG-------QHEMLIL 511 (570)
Q Consensus 442 ~~g~L~V~v~~a~~L~~~~--~~g~~dpyv~v~~~~-~~~~~kT~v~~~t~nP~w~e~f~f~v~~~-------~~~~L~i 511 (570)
..+.+.++|.++. +.+.- ..+..+|+.-+.+.- .-..+.|.++. ..+|.+|.+-+|.+... ....+.+
T Consensus 16 gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 16 GENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 4578999999886 22110 012345655444432 23456777765 78999999988888521 2346889
Q ss_pred EEEECCCCCCceeEEEEEeccccccCc-eEEEEEEecC-----CCCeEEEEEEEEEe
Q 008305 512 DVYDHDTFGKDKMGKCIMTLTRVMMEG-EIQDSFHIDG-----TKSGKLFLNLKWTP 562 (570)
Q Consensus 512 ~V~d~~~~~~d~lG~~~i~l~~l~~~~-~~~~w~~L~~-----~~~G~i~l~~~~~p 562 (570)
++.......-+.||.+.|+|.+++... ......+|.+ ..-|.+.+.++++.
T Consensus 94 ELhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 888864322258999999999999554 3555667743 34689999888874
No 103
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=86.32 E-value=4.2 Score=45.85 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=62.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCc----eEeCcccCCCCCCeeeeEEEEEee---cCCCcEEEEEEEE
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGN----RAKTRVAHDTLNPVWNQTFDFVVE---DGQHEMLILDVYD 515 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~----~~kT~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~V~d 515 (570)
...+.|+|.++.++... ...+-||++.+-.+.+ ...|..+....+|.|||-++|++. -|..+.|.|.||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46899999999999754 3467788887743332 234554455778999999998874 3467899999999
Q ss_pred CCCC--C----------C-ceeEEEEEeccccc
Q 008305 516 HDTF--G----------K-DKMGKCIMTLTRVM 535 (570)
Q Consensus 516 ~~~~--~----------~-d~lG~~~i~l~~l~ 535 (570)
.... + . ..+|.+.++|-+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 5321 1 1 38999999998743
No 104
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=80.68 E-value=10 Score=43.17 Aligned_cols=91 Identities=15% Similarity=0.188 Sum_probs=63.4
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCc----eEeCcccCCCCCCeeeeEEEEEee--c-CCCcEEEEEEEE
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGN----RAKTRVAHDTLNPVWNQTFDFVVE--D-GQHEMLILDVYD 515 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~----~~kT~v~~~t~nP~w~e~f~f~v~--~-~~~~~L~i~V~d 515 (570)
...+.|+|.++.++.... ....+-||++.+-.+.+ ..+|+.+ ...+|.|||-.+|.+. + |..+.|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 468899999999886433 33467899988854332 2344433 3467889999888874 3 467899999998
Q ss_pred CCCC--C--C-ceeEEEEEeccccc
Q 008305 516 HDTF--G--K-DKMGKCIMTLTRVM 535 (570)
Q Consensus 516 ~~~~--~--~-d~lG~~~i~l~~l~ 535 (570)
.... + . ..||.++++|-+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 6542 1 2 37999999998753
No 105
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=79.52 E-value=7.1 Score=43.98 Aligned_cols=94 Identities=15% Similarity=0.245 Sum_probs=62.4
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC---ceEEeeeeCCCCCCeeecEEEEEEe--c-CCCCeEEEEEE
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD---RMKTSKTINNELNPIWNEHFEFTVE--D-ASTQHLTVRVF 335 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~---~~~~T~~~~~t~nP~Wne~f~f~v~--~-~~~~~L~~~v~ 335 (570)
-...++|+|.++.++... ...+-||.+.+--.+. ....|+.+.-..+|.|||.+.|.+. + |....|.|.||
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 346899999999998654 3467788877753221 1234554555678999999999874 2 44568999999
Q ss_pred eCCCC--C---------CCCceEEEEEEEccccC
Q 008305 336 DDEGP--M---------LAPEIIGIAQIALKELE 358 (570)
Q Consensus 336 d~d~~--~---------~~d~~lG~~~i~l~~l~ 358 (570)
+.... . ..+..+|.+.+++-+-.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 96321 0 12458999999987653
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=73.37 E-value=19 Score=40.98 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=62.7
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCc---eEEeeeeCCCCCCeeecEEEEEEe---cCCCCeEEEEEEe
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDR---MKTSKTINNELNPIWNEHFEFTVE---DASTQHLTVRVFD 336 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~---~~~T~~~~~t~nP~Wne~f~f~v~---~~~~~~L~~~v~d 336 (570)
...++|+|..+.++.... ....+-||.+.+--.+.. ..+|+.+. ..+|.|||...|.+. -|....|.|.||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 457899999998885432 334678998888632222 23444333 467889999999874 2455689999998
Q ss_pred CCCCCC---CCceEEEEEEEccccC
Q 008305 337 DEGPML---APEIIGIAQIALKELE 358 (570)
Q Consensus 337 ~d~~~~---~d~~lG~~~i~l~~l~ 358 (570)
.....+ ....||.+.++|-+-.
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 764301 2357999999987654
No 107
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=71.24 E-value=20 Score=40.44 Aligned_cols=92 Identities=14% Similarity=0.138 Sum_probs=59.4
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCc---eEeCcccCCCCCCeeeeEEEEEee---cCCCcEEEEEEEEC
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGN---RAKTRVAHDTLNPVWNQTFDFVVE---DGQHEMLILDVYDH 516 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~---~~kT~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~V~d~ 516 (570)
...+.|.|..+....... +...+-||++.+-.+.+ ..+|..+.-+.+|.|||-++|.+. -|..+.|.|+||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 357888888886522111 23457788877643332 234544445678999999888874 34678999999974
Q ss_pred CCC----------------CC-ceeEEEEEeccccc
Q 008305 517 DTF----------------GK-DKMGKCIMTLTRVM 535 (570)
Q Consensus 517 ~~~----------------~~-d~lG~~~i~l~~l~ 535 (570)
... ++ ..+|.++++|-+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 321 12 37999999988754
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=70.90 E-value=14 Score=41.75 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=58.5
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCc--eEEeeeeCCCCCCeeecEEEEEEe--c-CCCCeEEEEEEeC
Q 008305 263 CGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDR--MKTSKTINNELNPIWNEHFEFTVE--D-ASTQHLTVRVFDD 337 (570)
Q Consensus 263 ~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~--~~~T~~~~~t~nP~Wne~f~f~v~--~-~~~~~L~~~v~d~ 337 (570)
...++|+|+.+....... ...++-||.+.+--.+.. ..+|+.+.-+.+|.|||.+.|.+. + |....|.+.||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 357889999886522111 134577888766532221 123444444667999999998874 2 4456899999985
Q ss_pred CCCC---------------CCCceEEEEEEEccccC
Q 008305 338 EGPM---------------LAPEIIGIAQIALKELE 358 (570)
Q Consensus 338 d~~~---------------~~d~~lG~~~i~l~~l~ 358 (570)
.... +....+|.+.++|-+-.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 3220 13458999999987654
No 109
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=66.38 E-value=19 Score=27.00 Aligned_cols=20 Identities=15% Similarity=0.331 Sum_probs=12.7
Q ss_pred hhhHHHHH-HHHHHHHhhhhh
Q 008305 4 LYGMFFGI-SFGIGLMVAYAR 23 (570)
Q Consensus 4 ~~g~~~g~-~~g~~l~~~~~~ 23 (570)
+.|.+.|+ ++|+++++.|..
T Consensus 14 v~gvi~gilliGllllliwk~ 34 (79)
T 2knc_B 14 LLSVMGAILLIGLAALLIWKL 34 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 45666664 467777776764
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=63.14 E-value=7.1 Score=44.64 Aligned_cols=89 Identities=12% Similarity=0.121 Sum_probs=59.8
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCCc----eEeCcccCCCCCCeeeeEEEEEee---cCCCcEEEEEEEE
Q 008305 443 RGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAGN----RAKTRVAHDTLNPVWNQTFDFVVE---DGQHEMLILDVYD 515 (570)
Q Consensus 443 ~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~----~~kT~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~V~d 515 (570)
...+.|+|..+.++... ...+-||++.+-.+.+ ...|..+..+.+|.|||-++|.+. -|..+.|.|.||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46899999999998754 3467788766643322 233544444678999999888874 2467899999998
Q ss_pred CCCC----------------------CC-ceeEEEEEecccc
Q 008305 516 HDTF----------------------GK-DKMGKCIMTLTRV 534 (570)
Q Consensus 516 ~~~~----------------------~~-d~lG~~~i~l~~l 534 (570)
.... +. ..+|.+.++|-+-
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp C------------------------------CCEEEEESBCT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 5210 11 2789999998774
No 111
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=61.71 E-value=6.2 Score=45.11 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=59.6
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCC---ceEEeeeeCCCCCCeeecEEEEEEec---CCCCeEEEEEE
Q 008305 262 PCGTLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRD---RMKTSKTINNELNPIWNEHFEFTVED---ASTQHLTVRVF 335 (570)
Q Consensus 262 ~~G~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~---~~~~T~~~~~t~nP~Wne~f~f~v~~---~~~~~L~~~v~ 335 (570)
-...++|+|..+.++... ...+-||.+.+--.+. ....|+.+.-..+|.|||.+.|.+.- |....|.|.||
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 346899999999998654 3467788766642221 12345545556789999999998742 34568999999
Q ss_pred eCCCC---------------------CCCCceEEEEEEEccccC
Q 008305 336 DDEGP---------------------MLAPEIIGIAQIALKELE 358 (570)
Q Consensus 336 d~d~~---------------------~~~d~~lG~~~i~l~~l~ 358 (570)
+.... .+.+..+|.+.+++-+-.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 428 AVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp CC------------------------------CCEEEEESBCTT
T ss_pred EecCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 86311 011347889988887643
No 112
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=60.96 E-value=6.1 Score=25.08 Aligned_cols=23 Identities=17% Similarity=0.566 Sum_probs=14.7
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhh
Q 008305 4 LYGMFFGISFGIGLMVAYARYEN 26 (570)
Q Consensus 4 ~~g~~~g~~~g~~l~~~~~~~~~ 26 (570)
+-|+++|.++|++++.+..+++.
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHHHHHHHHHHHe
Confidence 45777777777776666554333
No 113
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=53.81 E-value=13 Score=22.97 Aligned_cols=21 Identities=29% Similarity=0.608 Sum_probs=12.3
Q ss_pred hhhhhHHHHH----HHHHHHHhhhhh
Q 008305 2 SFLYGMFFGI----SFGIGLMVAYAR 23 (570)
Q Consensus 2 ~~~~g~~~g~----~~g~~l~~~~~~ 23 (570)
++++|+++|+ ++|++.. +|..
T Consensus 4 ~lL~GIVlGlipvtlaGLfv~-Ay~Q 28 (37)
T 1q90_G 4 PLLCGIVLGLVPVTIAGLFVT-AYLQ 28 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred hhhhhHHHhhHHHHHHHHHHH-HHHH
Confidence 3577777777 4555543 3443
No 114
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=47.21 E-value=5.8 Score=26.10 Aligned_cols=18 Identities=11% Similarity=0.097 Sum_probs=7.2
Q ss_pred hHHHHHHHHHHHHhhhhh
Q 008305 6 GMFFGISFGIGLMVAYAR 23 (570)
Q Consensus 6 g~~~g~~~g~~l~~~~~~ 23 (570)
|.+-|+++-..+.++|.+
T Consensus 16 gVVgGv~~~~ii~~~~~~ 33 (44)
T 2ks1_B 16 GMVGALLLLLVVALGIGL 33 (44)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ehhHHHHHHHHHHHHHHH
Confidence 444444443333333333
No 115
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=42.96 E-value=13 Score=23.08 Aligned_cols=20 Identities=30% Similarity=0.531 Sum_probs=8.8
Q ss_pred hhhhHHHHH----HHHHHHHhhhhh
Q 008305 3 FLYGMFFGI----SFGIGLMVAYAR 23 (570)
Q Consensus 3 ~~~g~~~g~----~~g~~l~~~~~~ 23 (570)
+++|+++|+ ++|++.. +|..
T Consensus 5 lL~GIVlGlipvtl~GLfv~-Ay~Q 28 (37)
T 1vf5_G 5 LLDGLVLGLVFATLGGLFYA-AYQQ 28 (37)
T ss_dssp ----CHHHHHHHHHHHHTHH-HHHH
T ss_pred hhhhHHHhhHHHHHHHHHHH-HHHH
Confidence 566777776 4565543 3443
No 116
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=42.51 E-value=8.8 Score=25.17 Aligned_cols=9 Identities=22% Similarity=0.390 Sum_probs=4.3
Q ss_pred hhhHHHHHH
Q 008305 4 LYGMFFGIS 12 (570)
Q Consensus 4 ~~g~~~g~~ 12 (570)
+-|.+.|++
T Consensus 14 Ia~~vVGvl 22 (44)
T 2jwa_A 14 IISAVVGIL 22 (44)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 344555544
No 117
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=41.73 E-value=24 Score=23.02 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=14.2
Q ss_pred hhhHHHHH-HHHHHHHhhhhhh
Q 008305 4 LYGMFFGI-SFGIGLMVAYARY 24 (570)
Q Consensus 4 ~~g~~~g~-~~g~~l~~~~~~~ 24 (570)
+.|.+.|+ ++|+++++.|..+
T Consensus 13 v~gvi~~ivliGl~lLliwk~~ 34 (43)
T 2k9j_B 13 LLSVMGAILLIGLAALLIWKLL 34 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 45666664 5788887777764
No 118
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=33.90 E-value=11 Score=26.79 Aligned_cols=14 Identities=21% Similarity=0.420 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHhh
Q 008305 7 MFFGISFGIGLMVA 20 (570)
Q Consensus 7 ~~~g~~~g~~l~~~ 20 (570)
+++|..+|+++++.
T Consensus 12 ivlGg~~~lll~~g 25 (70)
T 2klu_A 12 IVLGGVAGLLLFIG 25 (70)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHH
Confidence 56666666655554
No 119
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=26.48 E-value=2.9e+02 Score=23.31 Aligned_cols=93 Identities=12% Similarity=0.101 Sum_probs=56.1
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCCcEEEEEEeCCC-----ceEeCcccCCC--CCCeeeeEEEEEe--e-cCCCcEEE
Q 008305 441 IVRGVLSITVIAAENLPKVDLIGKADPFVVLQLKKAG-----NRAKTRVAHDT--LNPVWNQTFDFVV--E-DGQHEMLI 510 (570)
Q Consensus 441 ~~~g~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~-----~~~kT~v~~~t--~nP~w~e~f~f~v--~-~~~~~~L~ 510 (570)
+....|.|.|.+. ++.. .....|||+.|++.+.+ ..+.|.+-... ..=.|+...++.. . -+....+.
T Consensus 11 pg~t~l~v~Ie~i-glkd--a~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aiv 87 (152)
T 2qzq_A 11 PGMTLLTLTIEKI-GLKD--AGQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIF 87 (152)
T ss_dssp TTCCEEEEEEEEE-ECTT--GGGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEE
T ss_pred CCCeEEEEEEEEE-EeCC--HHHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEE
Confidence 3456788888877 6654 33457999999996432 24667655322 2223443333321 1 22566799
Q ss_pred EEEEECCCCCC--ceeEEEEEecccccc
Q 008305 511 LDVYDHDTFGK--DKMGKCIMTLTRVMM 536 (570)
Q Consensus 511 i~V~d~~~~~~--d~lG~~~i~l~~l~~ 536 (570)
+++.+.....+ ...+-+-+.++++..
T Consensus 88 fElkH~k~kkkk~S~kCw~f~~~d~i~~ 115 (152)
T 2qzq_A 88 FEFKHYKPKKRFTSTKCFAFMEMDEIKP 115 (152)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEGGGCCS
T ss_pred EEEEEecccceeeeeeeEEEEEhhhccc
Confidence 99998876544 256777777777644
No 120
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=26.43 E-value=5e+02 Score=25.99 Aligned_cols=20 Identities=5% Similarity=0.228 Sum_probs=15.9
Q ss_pred eeeEEEEEEEEEEEEEEEee
Q 008305 166 GLPVQVKNIGFTGVFRLIFK 185 (570)
Q Consensus 166 ~~~v~v~~~~~~g~lrv~l~ 185 (570)
.+.+.++++.+++.+|+...
T Consensus 103 ~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 103 NFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEEEEEEEeec
Confidence 55677888888888888876
No 121
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=21.44 E-value=3.7e+02 Score=22.68 Aligned_cols=91 Identities=11% Similarity=0.114 Sum_probs=46.5
Q ss_pred EEEEEEEEecCCCCCCCCCCCCcEEEEEEEeCCCc----eEEeeeeCC--CCCCeeecEEEEEE--e-cCCCCeEEEEEE
Q 008305 265 TLDVKLVQAKELTNKDLIGKSDPFVVIFVRPLRDR----MKTSKTINN--ELNPIWNEHFEFTV--E-DASTQHLTVRVF 335 (570)
Q Consensus 265 ~L~V~V~~A~~L~~~~~~g~~dpyv~v~l~~~~~~----~~~T~~~~~--t~nP~Wne~f~f~v--~-~~~~~~L~~~v~ 335 (570)
.|.|.|.+- +++.. ....|||+.|++.+..+. .+.|.+... +..-.|+.+.++.. + -+.+..+.|++.
T Consensus 15 ~l~v~Ie~i-glkda--~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfElk 91 (152)
T 2qzq_A 15 LLTLTIEKI-GLKDA--GQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEFK 91 (152)
T ss_dssp EEEEEEEEE-ECTTG--GGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEEE
T ss_pred EEEEEEEEE-EeCCH--HHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEEE
Confidence 566665554 66543 345799999999854443 355654422 22223443332221 1 123456888888
Q ss_pred eCCCCCCCCceEEEEEEEccccC
Q 008305 336 DDEGPMLAPEIIGIAQIALKELE 358 (570)
Q Consensus 336 d~d~~~~~d~~lG~~~i~l~~l~ 358 (570)
++......-...+.+.+.++++.
T Consensus 92 H~k~kkkk~S~kCw~f~~~d~i~ 114 (152)
T 2qzq_A 92 HYKPKKRFTSTKCFAFMEMDEIK 114 (152)
T ss_dssp EEETTTTEEEEEEEEEEEGGGCC
T ss_pred EecccceeeeeeeEEEEEhhhcc
Confidence 87654111113344445554443
Done!